locus-tag class description AU29_RS00010 PF00696 Amino acid kinase family AU29_RS00010 PF03447 Homoserine dehydrogenase, NAD binding domain AU29_RS00010 PF00742 Homoserine dehydrogenase AU29_RS00010 PF13840 ACT domain AU29_RS00010 PF01842 ACT domain AU29_RS00015 PF00288 GHMP kinases N terminal domain AU29_RS00015 PF08544 GHMP kinases C terminal AU29_RS00020 PF00291 Pyridoxal-phosphate dependent enzyme AU29_RS00020 PF14821 Threonine synthase N terminus AU29_RS00025 PF03883 Peroxide stress protein YaaA AU29_RS00030 PF01235 Sodium:alanine symporter family AU29_RS00035 PF00923 Transaldolase/Fructose-6-phosphate aldolase AU29_RS00040 PF00994 Probable molybdopterin binding domain AU29_RS00045 PF01184 GPR1/FUN34/yaaH family AU29_RS00050 PF03981 Ubiquinol-cytochrome C chaperone AU29_RS00050 PF13099 Domain of unknown function (DUF3944) AU29_RS00055 PF10807 Protein of unknown function (DUF2541) AU29_RS00060 PF00012 Hsp70 protein AU29_RS00065 PF01556 DnaJ C terminal domain AU29_RS00065 PF00684 DnaJ central domain AU29_RS00065 PF00226 DnaJ domain AU29_RS00070 PF03466 LysR substrate binding domain AU29_RS00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS00090 PF00704 Glycosyl hydrolases family 18 AU29_RS00105 PF00419 Fimbrial protein AU29_RS00110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS00110 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS00115 PF13954 PapC N-terminal domain AU29_RS00115 PF00577 Outer membrane usher protein AU29_RS00115 PF13953 PapC C-terminal domain AU29_RS00120 PF00419 Fimbrial protein AU29_RS00125 PF00419 Fimbrial protein AU29_RS00130 PF16970 Type-1 fimbrial protein, A AU29_RS00135 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS00135 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS00155 PF03466 LysR substrate binding domain AU29_RS00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS00170 PF02872 5'-nucleotidase, C-terminal domain AU29_RS00170 PF00149 Calcineurin-like phosphoesterase AU29_RS00180 PF00884 Sulfatase AU29_RS00180 PF16385 Domain of unknown function AU29_RS00185 PF13186 Iron-sulfur cluster-binding domain AU29_RS00185 PF04055 Radical SAM superfamily AU29_RS00200 PF06965 Na+/H+ antiporter 1 AU29_RS00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS00205 PF03466 LysR substrate binding domain AU29_RS00210 PF01055 Glycosyl hydrolases family 31 AU29_RS00220 PF01649 Ribosomal protein S20 AU29_RS00225 PF10837 Protein of unknown function (DUF2575) AU29_RS00230 PF01687 Riboflavin kinase AU29_RS00230 PF06574 FAD synthetase AU29_RS00235 PF08264 Anticodon-binding domain of tRNA AU29_RS00235 PF06827 Zinc finger found in FPG and IleRS AU29_RS00235 PF00133 tRNA synthetases class I (I, L, M and V) AU29_RS00240 PF01252 Signal peptidase (SPase) II AU29_RS00245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AU29_RS00250 PF02401 LytB protein AU29_RS00265 PF01156 Inosine-uridine preferring nucleoside hydrolase AU29_RS00270 PF12431 Transcriptional regulator AU29_RS00270 PF00072 Response regulator receiver domain AU29_RS00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS00275 PF17203 Single cache domain 3 AU29_RS00280 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AU29_RS00285 PF02436 Conserved carboxylase domain AU29_RS00285 PF00682 HMGL-like AU29_RS00285 PF00364 Biotin-requiring enzyme AU29_RS00290 PF04277 Oxaloacetate decarboxylase, gamma chain AU29_RS00295 PF03390 2-hydroxycarboxylate transporter family AU29_RS00300 PF00583 Acetyltransferase (GNAT) family AU29_RS00300 PF08218 Citrate lyase ligase C-terminal domain AU29_RS00305 PF06857 Malonate decarboxylase delta subunit (MdcD) AU29_RS00310 PF03328 HpcH/HpaI aldolase/citrate lyase family AU29_RS00315 PF04223 Citrate lyase, alpha subunit (CitF) AU29_RS00320 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AU29_RS00325 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AU29_RS00330 PF05173 Dihydrodipicolinate reductase, C-terminus AU29_RS00330 PF01113 Dihydrodipicolinate reductase, N-terminus AU29_RS00335 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AU29_RS00335 PF00117 Glutamine amidotransferase class-I AU29_RS00340 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AU29_RS00340 PF02142 MGS-like domain AU29_RS00340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AU29_RS00345 PF07180 CaiF/GrlA transcriptional regulator AU29_RS00350 PF00132 Bacterial transferase hexapeptide (six repeats) AU29_RS00355 PF00378 Enoyl-CoA hydratase/isomerase AU29_RS00360 PF00501 AMP-binding enzyme AU29_RS00360 PF13193 AMP-binding enzyme C-terminal domain AU29_RS00365 PF02515 CoA-transferase family III AU29_RS00370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AU29_RS00370 PF02770 Acyl-CoA dehydrogenase, middle domain AU29_RS00370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AU29_RS00375 PF02028 BCCT, betaine/carnitine/choline family transporter AU29_RS00385 PF01012 Electron transfer flavoprotein domain AU29_RS00390 PF00766 Electron transfer flavoprotein FAD-binding domain AU29_RS00390 PF01012 Electron transfer flavoprotein domain AU29_RS00395 PF01494 FAD binding domain AU29_RS00405 PF00083 Sugar (and other) transporter AU29_RS00410 PF06004 Bacterial protein of unknown function (DUF903) AU29_RS00430 PF00884 Sulfatase AU29_RS00440 PF02525 Flavodoxin-like fold AU29_RS00445 PF02254 TrkA-N domain AU29_RS00445 PF00999 Sodium/hydrogen exchanger family AU29_RS00450 PF00186 Dihydrofolate reductase AU29_RS00455 PF00149 Calcineurin-like phosphoesterase AU29_RS00460 PF04379 ApaG domain AU29_RS00465 PF00398 Ribosomal RNA adenine dimethylase AU29_RS00470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AU29_RS00475 PF09312 SurA N-terminal domain AU29_RS00475 PF00639 PPIC-type PPIASE domain AU29_RS00480 PF04453 LPS transport system D AU29_RS00480 PF03968 OstA-like protein AU29_RS00485 PF05099 Tellurite resistance protein TerB AU29_RS00485 PF00226 DnaJ domain AU29_RS00490 PF00849 RNA pseudouridylate synthase AU29_RS00495 PF18339 RapA N-terminal Tudor like domain 1 AU29_RS00495 PF00176 SNF2 family N-terminal domain AU29_RS00495 PF18337 RapA N-terminal Tudor like domain AU29_RS00495 PF12137 RNA polymerase recycling family C-terminal AU29_RS00495 PF00271 Helicase conserved C-terminal domain AU29_RS00500 PF00136 DNA polymerase family B AU29_RS00500 PF03104 DNA polymerase family B, exonuclease domain AU29_RS00515 PF00596 Class II Aldolase and Adducin N-terminal domain AU29_RS00520 PF11762 L-arabinose isomerase C-terminal domain AU29_RS00520 PF02610 L-arabinose isomerase AU29_RS00525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AU29_RS00530 PF02311 AraC-like ligand binding domain AU29_RS00530 PF12833 Helix-turn-helix domain AU29_RS00535 PF09335 SNARE associated Golgi protein AU29_RS00540 PF00005 ABC transporter AU29_RS00545 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS00555 PF12793 Sugar transport-related sRNA regulator N-term AU29_RS00555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AU29_RS00570 PF00694 Aconitase C-terminal domain AU29_RS00575 PF00330 Aconitase family (aconitate hydratase) AU29_RS00580 PF00180 Isocitrate/isopropylmalate dehydrogenase AU29_RS00585 PF00682 HMGL-like AU29_RS00585 PF08502 LeuA allosteric (dimerisation) domain AU29_RS00590 PF08054 Leucine operon leader peptide AU29_RS00595 PF03466 LysR substrate binding domain AU29_RS00595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS00600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AU29_RS00600 PF00205 Thiamine pyrophosphate enzyme, central domain AU29_RS00600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AU29_RS00605 PF10369 Small subunit of acetolactate synthase AU29_RS00610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AU29_RS00610 PF00356 Bacterial regulatory proteins, lacI family AU29_RS00615 PF02381 MraZ protein, putative antitoxin-like AU29_RS00620 PF01795 MraW methylase family AU29_RS00625 PF04999 Cell division protein FtsL AU29_RS00630 PF00905 Penicillin binding protein transpeptidase domain AU29_RS00630 PF03717 Penicillin-binding Protein dimerisation domain AU29_RS00635 PF01225 Mur ligase family, catalytic domain AU29_RS00635 PF08245 Mur ligase middle domain AU29_RS00635 PF02875 Mur ligase family, glutamate ligase domain AU29_RS00640 PF08245 Mur ligase middle domain AU29_RS00640 PF01225 Mur ligase family, catalytic domain AU29_RS00640 PF02875 Mur ligase family, glutamate ligase domain AU29_RS00645 PF00953 Glycosyl transferase family 4 AU29_RS00645 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AU29_RS00650 PF08245 Mur ligase middle domain AU29_RS00650 PF02875 Mur ligase family, glutamate ligase domain AU29_RS00655 PF01098 Cell cycle protein AU29_RS00660 PF03033 Glycosyltransferase family 28 N-terminal domain AU29_RS00660 PF04101 Glycosyltransferase family 28 C-terminal domain AU29_RS00665 PF08245 Mur ligase middle domain AU29_RS00665 PF01225 Mur ligase family, catalytic domain AU29_RS00665 PF02875 Mur ligase family, glutamate ligase domain AU29_RS00670 PF07478 D-ala D-ala ligase C-terminus AU29_RS00670 PF01820 D-ala D-ala ligase N-terminus AU29_RS00675 PF03799 Cell division protein FtsQ AU29_RS00675 PF08478 POTRA domain, FtsQ-type AU29_RS00680 PF02491 SHS2 domain inserted in FTSA AU29_RS00685 PF00091 Tubulin/FtsZ family, GTPase domain AU29_RS00685 PF12327 FtsZ family, C-terminal domain AU29_RS00690 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AU29_RS00695 PF06558 Secretion monitor precursor protein (SecM) AU29_RS00700 PF01043 SecA preprotein cross-linking domain AU29_RS00700 PF07517 SecA DEAD-like domain AU29_RS00700 PF07516 SecA Wing and Scaffold domain AU29_RS00700 PF02810 SEC-C motif AU29_RS00705 PF00293 NUDIX domain AU29_RS00710 PF00248 Aldo/keto reductase family AU29_RS00715 PF03466 LysR substrate binding domain AU29_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS00720 PF03884 DNA gyrase inhibitor YacG AU29_RS00725 PF07072 Cell division protein AU29_RS00730 PF01121 Dephospho-CoA kinase AU29_RS00735 PF00478 IMP dehydrogenase / GMP reductase domain AU29_RS00740 PF00482 Type II secretion system (T2SS), protein F AU29_RS00745 PF00437 Type II/IV secretion system protein AU29_RS00745 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AU29_RS00750 PF07963 Prokaryotic N-terminal methylation motif AU29_RS00755 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AU29_RS00755 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AU29_RS00760 PF01510 N-acetylmuramoyl-L-alanine amidase AU29_RS00765 PF17113 Regulatory signalling modulator protein AmpE AU29_RS00770 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AU29_RS00770 PF04616 Glycosyl hydrolases family 43 AU29_RS00780 PF00324 Amino acid permease AU29_RS00785 PF07729 FCD domain AU29_RS00785 PF00392 Bacterial regulatory proteins, gntR family AU29_RS00790 PF17831 Pyruvate dehydrogenase E1 component middle domain AU29_RS00790 PF00456 Transketolase, thiamine diphosphate binding domain AU29_RS00795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AU29_RS00795 PF00364 Biotin-requiring enzyme AU29_RS00795 PF02817 e3 binding domain AU29_RS00800 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS00800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AU29_RS00815 PF11737 Protein of unknown function (DUF3300) AU29_RS00820 PF11791 Aconitate B N-terminal domain AU29_RS00820 PF06434 Aconitate hydratase 2 N-terminus AU29_RS00820 PF00330 Aconitase family (aconitate hydratase) AU29_RS00835 PF06062 Uncharacterised protein family (UPF0231) AU29_RS00840 PF03812 2-keto-3-deoxygluconate permease AU29_RS00845 PF07005 Sugar-binding N-terminal domain AU29_RS00845 PF17042 Nucleotide-binding C-terminal domain AU29_RS00850 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AU29_RS00855 PF00455 DeoR C terminal sensor domain AU29_RS00855 PF08220 DeoR-like helix-turn-helix domain AU29_RS00860 PF02675 S-adenosylmethionine decarboxylase AU29_RS00865 PF17284 Spermidine synthase tetramerisation domain AU29_RS00870 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AU29_RS00875 PF07731 Multicopper oxidase AU29_RS00875 PF00394 Multicopper oxidase AU29_RS00875 PF07732 Multicopper oxidase AU29_RS00880 PF01011 PQQ enzyme repeat AU29_RS00885 PF00156 Phosphoribosyl transferase domain AU29_RS00890 PF00484 Carbonic anhydrase AU29_RS00895 PF00005 ABC transporter AU29_RS00900 PF01061 ABC-2 type transporter AU29_RS00905 PF00419 Fimbrial protein AU29_RS00910 PF13954 PapC N-terminal domain AU29_RS00910 PF13953 PapC C-terminal domain AU29_RS00910 PF00577 Outer membrane usher protein AU29_RS00915 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS00915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS00925 PF03610 PTS system fructose IIA component AU29_RS00930 PF01522 Polysaccharide deacetylase AU29_RS00935 PF02261 Aspartate decarboxylase AU29_RS00940 PF02569 Pantoate-beta-alanine ligase AU29_RS00945 PF02548 Ketopantoate hydroxymethyltransferase AU29_RS00950 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AU29_RS00955 PF12627 Probable RNA and SrmB- binding site of polymerase A AU29_RS00955 PF01743 Poly A polymerase head domain AU29_RS00955 PF12626 Polymerase A arginine-rich C-terminus AU29_RS00960 PF00749 tRNA synthetases class I (E and Q), catalytic domain AU29_RS00965 PF01258 Prokaryotic dksA/traR C4-type zinc finger AU29_RS00970 PF03749 Sugar fermentation stimulation protein RE domain AU29_RS00970 PF17746 SfsA N-terminal OB domain AU29_RS00975 PF02834 LigT like Phosphoesterase AU29_RS00980 PF04408 Helicase associated domain (HA2) AU29_RS00980 PF00270 DEAD/DEAH box helicase AU29_RS00980 PF00271 Helicase conserved C-terminal domain AU29_RS00980 PF08482 ATP-dependent helicase C-terminal AU29_RS00985 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AU29_RS00985 PF00905 Penicillin binding protein transpeptidase domain AU29_RS00985 PF14814 Bifunctional transglycosylase second domain AU29_RS00985 PF00912 Transglycosylase AU29_RS00990 PF00593 TonB dependent receptor AU29_RS00990 PF07715 TonB-dependent Receptor Plug Domain AU29_RS00995 PF00005 ABC transporter AU29_RS01000 PF01497 Periplasmic binding protein AU29_RS01005 PF01032 FecCD transport family AU29_RS01015 PF00577 Outer membrane usher protein AU29_RS01015 PF13953 PapC C-terminal domain AU29_RS01015 PF13954 PapC N-terminal domain AU29_RS01020 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS01020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS01025 PF00419 Fimbrial protein AU29_RS01030 PF00419 Fimbrial protein AU29_RS01035 PF00419 Fimbrial protein AU29_RS01040 PF11245 Protein of unknown function (DUF2544) AU29_RS01045 PF00202 Aminotransferase class-III AU29_RS01050 PF00654 Voltage gated chloride channel AU29_RS01055 PF01521 Iron-sulphur cluster biosynthesis AU29_RS01060 PF03458 UPF0126 domain AU29_RS01065 PF01497 Periplasmic binding protein AU29_RS01070 PF01048 Phosphorylase superfamily AU29_RS01075 PF13286 Phosphohydrolase-associated domain AU29_RS01075 PF01966 HD domain AU29_RS01080 PF00595 PDZ domain AU29_RS01085 PF05651 Putative sugar diacid recognition AU29_RS01085 PF13556 PucR C-terminal helix-turn-helix domain AU29_RS01085 PF17853 GGDEF-like domain AU29_RS01095 PF11944 Protein of unknown function (DUF3461) AU29_RS01100 PF00083 Sugar (and other) transporter AU29_RS01100 PF07690 Major Facilitator Superfamily AU29_RS01105 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AU29_RS01105 PF14602 Hexapeptide repeat of succinyl-transferase AU29_RS01105 PF00132 Bacterial transferase hexapeptide (six repeats) AU29_RS01110 PF01909 Nucleotidyltransferase domain AU29_RS01110 PF01966 HD domain AU29_RS01110 PF08335 GlnD PII-uridylyltransferase AU29_RS01110 PF01842 ACT domain AU29_RS01115 PF00557 Metallopeptidase family M24 AU29_RS01120 PF00318 Ribosomal protein S2 AU29_RS01125 PF00889 Elongation factor TS AU29_RS01130 PF00696 Amino acid kinase family AU29_RS01135 PF01765 Ribosome recycling factor AU29_RS01140 PF13288 DXP reductoisomerase C-terminal domain AU29_RS01140 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AU29_RS01140 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AU29_RS01145 PF01255 Putative undecaprenyl diphosphate synthase AU29_RS01155 PF02163 Peptidase family M50 AU29_RS01155 PF17820 PDZ domain AU29_RS01160 PF07244 Surface antigen variable number repeat AU29_RS01160 PF01103 Surface antigen AU29_RS01165 PF03938 Outer membrane protein (OmpH-like) AU29_RS01170 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AU29_RS01170 PF00132 Bacterial transferase hexapeptide (six repeats) AU29_RS01175 PF07977 FabA-like domain AU29_RS01180 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AU29_RS01180 PF00132 Bacterial transferase hexapeptide (six repeats) AU29_RS01185 PF02684 Lipid-A-disaccharide synthetase AU29_RS01190 PF01351 Ribonuclease HII AU29_RS01195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AU29_RS01195 PF01336 OB-fold nucleic acid binding domain AU29_RS01195 PF02811 PHP domain AU29_RS01195 PF07733 Bacterial DNA polymerase III alpha NTPase domain AU29_RS01195 PF14579 Helix-hairpin-helix motif AU29_RS01200 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AU29_RS01205 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AU29_RS01205 PF18416 N-acetylglucosamine binding protein domain 2 AU29_RS01210 PF01276 Orn/Lys/Arg decarboxylase, major domain AU29_RS01210 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AU29_RS01210 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AU29_RS01215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AU29_RS01220 PF09179 TilS substrate binding domain AU29_RS01220 PF01171 PP-loop family AU29_RS01220 PF11734 TilS substrate C-terminal domain AU29_RS01225 PF07073 Modulator of Rho-dependent transcription termination (ROF) AU29_RS01230 PF06786 Uncharacterised protein family (UPF0253) AU29_RS01235 PF07152 YaeQ protein AU29_RS01240 PF00472 RF-1 domain AU29_RS01245 PF04170 NlpE N-terminal domain AU29_RS01245 PF17185 NlpE C-terminal OB domain AU29_RS01250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AU29_RS01250 PF03129 Anticodon binding domain AU29_RS01250 PF04073 Aminoacyl-tRNA editing domain AU29_RS01255 PF01980 tRNA-methyltransferase O AU29_RS01255 PF18389 TrmO C-terminal domain AU29_RS01260 PF16358 RcsF lipoprotein AU29_RS01265 PF03180 NLPA lipoprotein AU29_RS01270 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS01275 PF09383 NIL domain AU29_RS01275 PF00005 ABC transporter AU29_RS01315 PF00248 Aldo/keto reductase family AU29_RS01320 PF03466 LysR substrate binding domain AU29_RS01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS01325 PF07690 Major Facilitator Superfamily AU29_RS01330 PF03372 Endonuclease/Exonuclease/phosphatase family AU29_RS01335 PF08241 Methyltransferase domain AU29_RS01340 PF01464 Transglycosylase SLT domain AU29_RS01340 PF01476 LysM domain AU29_RS01345 PF00753 Metallo-beta-lactamase superfamily AU29_RS01345 PF16123 Hydroxyacylglutathione hydrolase C-terminus AU29_RS01350 PF08241 Methyltransferase domain AU29_RS01355 PF00075 RNase H AU29_RS01360 PF00929 Exonuclease AU29_RS01395 PF05593 RHS Repeat AU29_RS01395 PF03527 RHS protein AU29_RS01440 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS01440 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS01445 PF13953 PapC C-terminal domain AU29_RS01445 PF13954 PapC N-terminal domain AU29_RS01445 PF00577 Outer membrane usher protein AU29_RS01465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS01465 PF03466 LysR substrate binding domain AU29_RS01475 PF13505 Outer membrane protein beta-barrel domain AU29_RS01485 PF00795 Carbon-nitrogen hydrolase AU29_RS01490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AU29_RS01490 PF02770 Acyl-CoA dehydrogenase, middle domain AU29_RS01490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AU29_RS01490 PF09317 Domain of unknown function (DUF1974) AU29_RS01495 PF13580 SIS domain AU29_RS01500 PF13230 Glutamine amidotransferases class-II AU29_RS01505 PF03734 L,D-transpeptidase catalytic domain AU29_RS01510 PF11799 impB/mucB/samB family C-terminal domain AU29_RS01510 PF11798 IMS family HHH motif AU29_RS01510 PF00817 impB/mucB/samB family AU29_RS01520 PF00472 RF-1 domain AU29_RS01525 PF01546 Peptidase family M20/M25/M40 AU29_RS01525 PF07687 Peptidase dimerisation domain AU29_RS01530 PF00156 Phosphoribosyl transferase domain AU29_RS01535 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AU29_RS01540 PF07417 Sigma factor-binding transcriptional regulator Crl AU29_RS01545 PF00267 Gram-negative porin AU29_RS01550 PF00696 Amino acid kinase family AU29_RS01550 PF01472 PUA domain AU29_RS01555 PF00171 Aldehyde dehydrogenase family AU29_RS01565 PF13333 Integrase core domain AU29_RS01565 PF13276 HTH-like domain AU29_RS01565 PF00665 Integrase core domain AU29_RS01570 PF01527 Transposase AU29_RS01575 PF18427 DD-reactivating factor swiveling domain AU29_RS01575 PF08841 Diol dehydratase reactivase ATPase-like domain AU29_RS01580 PF08986 Domain of unknown function (DUF1889) AU29_RS01585 PF07690 Major Facilitator Superfamily AU29_RS01590 PF00330 Aconitase family (aconitate hydratase) AU29_RS01595 PF00694 Aconitase C-terminal domain AU29_RS01600 PF01557 Fumarylacetoacetate (FAA) hydrolase family AU29_RS01605 PF00561 alpha/beta hydrolase fold AU29_RS01610 PF03466 LysR substrate binding domain AU29_RS01610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS01625 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS01625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS01635 PF13954 PapC N-terminal domain AU29_RS01635 PF13953 PapC C-terminal domain AU29_RS01635 PF00577 Outer membrane usher protein AU29_RS01640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS01640 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS01645 PF16970 Type-1 fimbrial protein, A AU29_RS01660 PF12792 CSS motif domain associated with EAL AU29_RS01660 PF00563 EAL domain AU29_RS01675 PF13505 Outer membrane protein beta-barrel domain AU29_RS01695 PF02321 Outer membrane efflux protein AU29_RS01700 PF00873 AcrB/AcrD/AcrF family AU29_RS01705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AU29_RS01705 PF00529 HlyD membrane-fusion protein of T1SS AU29_RS01710 PF00403 Heavy-metal-associated domain AU29_RS01715 PF00376 MerR family regulatory protein AU29_RS01715 PF09278 MerR, DNA binding AU29_RS01730 PF07690 Major Facilitator Superfamily AU29_RS01735 PF01555 DNA methylase AU29_RS01735 PF18273 Type III R-M EcoP15I C-terminal domain AU29_RS01740 PF08774 VRR-NUC domain AU29_RS01740 PF04851 Type III restriction enzyme, res subunit AU29_RS01750 PF01654 Cytochrome bd terminal oxidase subunit I AU29_RS01755 PF02322 Cytochrome bd terminal oxidase subunit II AU29_RS01770 PF00593 TonB dependent receptor AU29_RS01770 PF07715 TonB-dependent Receptor Plug Domain AU29_RS01775 PF01810 LysE type translocator AU29_RS01780 PF07338 Protein of unknown function (DUF1471) AU29_RS01785 PF06506 Propionate catabolism activator AU29_RS01785 PF00158 Sigma-54 interaction domain AU29_RS01785 PF02954 Bacterial regulatory protein, Fis family AU29_RS01795 PF00285 Citrate synthase, C-terminal domain AU29_RS01800 PF03972 MmgE/PrpD family AU29_RS01805 PF00501 AMP-binding enzyme AU29_RS01805 PF13193 AMP-binding enzyme C-terminal domain AU29_RS01805 PF16177 Acetyl-coenzyme A synthetase N-terminus AU29_RS01810 PF00490 Delta-aminolevulinic acid dehydratase AU29_RS01815 PF03797 Autotransporter beta-domain AU29_RS01820 PF15977 Winged helix-turn-helix DNA binding AU29_RS01825 PF00144 Beta-lactamase AU29_RS01830 PF05992 SbmA/BacA-like family AU29_RS01835 PF07759 Protein of unknown function (DUF1615) AU29_RS01840 PF10954 Protein of unknown function (DUF2755) AU29_RS01845 PF10953 Protein of unknown function (DUF2754) AU29_RS01850 PF07478 D-ala D-ala ligase C-terminus AU29_RS01850 PF01820 D-ala D-ala ligase N-terminus AU29_RS01860 PF07690 Major Facilitator Superfamily AU29_RS01865 PF10796 Sigma-S stabilisation anti-adaptor protein AU29_RS01870 PF07769 psiF repeat AU29_RS01875 PF05230 MASE2 domain AU29_RS01875 PF00990 Diguanylate cyclase, GGDEF domain AU29_RS01880 PF03807 NADP oxidoreductase coenzyme F420-dependent AU29_RS01880 PF14748 Pyrroline-5-carboxylate reductase dimerisation AU29_RS01885 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AU29_RS01890 PF01202 Shikimate kinase AU29_RS01895 PF16362 YaiA protein AU29_RS01900 PF07302 AroM protein AU29_RS01905 PF06865 Pyrimidine/purine nucleoside phosphorylase AU29_RS01910 PF04381 Putative exonuclease, RdgC AU29_RS01915 PF00480 ROK family AU29_RS01920 PF07690 Major Facilitator Superfamily AU29_RS01925 PF13476 AAA domain AU29_RS01930 PF12320 Type 5 capsule protein repressor C-terminal domain AU29_RS01930 PF00149 Calcineurin-like phosphoesterase AU29_RS01940 PF00072 Response regulator receiver domain AU29_RS01940 PF00486 Transcriptional regulatory protein, C terminal AU29_RS01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS01945 PF00989 PAS fold AU29_RS01945 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS01945 PF11808 Phosphate regulon sensor protein PhoR AU29_RS01950 PF05525 Branched-chain amino acid transport protein AU29_RS01955 PF00324 Amino acid permease AU29_RS01960 PF00128 Alpha amylase, catalytic domain AU29_RS01960 PF02903 Alpha amylase, N-terminal ig-like domain AU29_RS01965 PF00578 AhpC/TSA family AU29_RS01965 PF10417 C-terminal domain of 1-Cys peroxiredoxin AU29_RS01970 PF04336 Acyl carrier protein phosphodiesterase AU29_RS01975 PF02547 Queuosine biosynthesis protein AU29_RS01980 PF01702 Queuine tRNA-ribosyltransferase AU29_RS01985 PF02699 Preprotein translocase subunit AU29_RS01990 PF02355 Protein export membrane protein AU29_RS01990 PF13721 SecD export protein N-terminal TM region AU29_RS01990 PF07549 SecD/SecF GG Motif AU29_RS01995 PF02355 Protein export membrane protein AU29_RS01995 PF07549 SecD/SecF GG Motif AU29_RS02010 PF01844 HNH endonuclease AU29_RS02020 PF03502 Nucleoside-specific channel-forming protein, Tsx AU29_RS02025 PF11622 Protein of unknown function (DUF3251) AU29_RS02030 PF03477 ATP cone domain AU29_RS02035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AU29_RS02035 PF01872 RibD C-terminal domain AU29_RS02040 PF00885 6,7-dimethyl-8-ribityllumazine synthase AU29_RS02045 PF01029 NusB family AU29_RS02050 PF00586 AIR synthase related protein, N-terminal domain AU29_RS02050 PF02769 AIR synthase related protein, C-terminal domain AU29_RS02055 PF04608 Phosphatidylglycerophosphatase A AU29_RS02060 PF00248 Aldo/keto reductase family AU29_RS02065 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AU29_RS02065 PF02779 Transketolase, pyrimidine binding domain AU29_RS02065 PF02780 Transketolase, C-terminal domain AU29_RS02070 PF00348 Polyprenyl synthetase AU29_RS02075 PF02609 Exonuclease VII small subunit AU29_RS02080 PF02926 THUMP domain AU29_RS02080 PF02568 Thiamine biosynthesis protein (ThiI) AU29_RS02085 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS02090 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS02095 PF08402 TOBE domain AU29_RS02095 PF00005 ABC transporter AU29_RS02100 PF01547 Bacterial extracellular solute-binding protein AU29_RS02105 PF07702 UTRA domain AU29_RS02105 PF00392 Bacterial regulatory proteins, gntR family AU29_RS02110 PF00266 Aminotransferase class-V AU29_RS02120 PF01965 DJ-1/PfpI family AU29_RS02125 PF08546 Ketopantoate reductase PanE/ApbA C terminal AU29_RS02125 PF02558 Ketopantoate reductase PanE/ApbA AU29_RS02130 PF04461 Protein of unknown function (DUF520) AU29_RS02135 PF07690 Major Facilitator Superfamily AU29_RS02150 PF01040 UbiA prenyltransferase family AU29_RS02155 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AU29_RS02160 PF00510 Cytochrome c oxidase subunit III AU29_RS02165 PF00115 Cytochrome C and Quinol oxidase polypeptide I AU29_RS02170 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AU29_RS02170 PF06481 COX Aromatic Rich Motif AU29_RS02175 PF07690 Major Facilitator Superfamily AU29_RS02180 PF03923 Uncharacterized lipoprotein AU29_RS02180 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AU29_RS02185 PF01722 BolA-like protein AU29_RS02190 PF05698 Bacterial trigger factor protein (TF) C-terminus AU29_RS02190 PF05697 Bacterial trigger factor protein (TF) AU29_RS02190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AU29_RS02195 PF00574 Clp protease AU29_RS02200 PF07724 AAA domain (Cdc48 subfamily) AU29_RS02200 PF10431 C-terminal, D2-small domain, of ClpB protein AU29_RS02200 PF06689 ClpX C4-type zinc finger AU29_RS02205 PF00004 ATPase family associated with various cellular activities (AAA) AU29_RS02205 PF02190 ATP-dependent protease La (LON) substrate-binding domain AU29_RS02205 PF05362 Lon protease (S16) C-terminal proteolytic domain AU29_RS02210 PF00216 Bacterial DNA-binding protein AU29_RS02215 PF13145 PPIC-type PPIASE domain AU29_RS02230 PF06508 Queuosine biosynthesis protein QueC AU29_RS02235 PF12793 Sugar transport-related sRNA regulator N-term AU29_RS02235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AU29_RS02250 PF13404 AsnC-type helix-turn-helix domain AU29_RS02250 PF01037 Lrp/AsnC ligand binding domain AU29_RS02255 PF00005 ABC transporter AU29_RS02255 PF00664 ABC transporter transmembrane region AU29_RS02260 PF00664 ABC transporter transmembrane region AU29_RS02260 PF00005 ABC transporter AU29_RS02265 PF00543 Nitrogen regulatory protein P-II AU29_RS02270 PF00909 Ammonium Transporter Family AU29_RS02280 PF09619 Type III secretion system lipoprotein chaperone (YscW) AU29_RS02285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AU29_RS02290 PF00563 EAL domain AU29_RS02290 PF12792 CSS motif domain associated with EAL AU29_RS02295 PF01197 Ribosomal protein L31 AU29_RS02300 PF00444 Ribosomal protein L36 AU29_RS02305 PF10777 Inner membrane protein YlaC AU29_RS02310 PF12464 Maltose acetyltransferase AU29_RS02310 PF14602 Hexapeptide repeat of succinyl-transferase AU29_RS02315 PF05321 Haemolysin expression modulating protein AU29_RS02320 PF10757 Biofilm formation regulator YbaJ AU29_RS02325 PF00873 AcrB/AcrD/AcrF family AU29_RS02330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AU29_RS02330 PF00529 HlyD membrane-fusion protein of T1SS AU29_RS02335 PF08361 MAATS-type transcriptional repressor, C-terminal region AU29_RS02335 PF00440 Bacterial regulatory proteins, tetR family AU29_RS02340 PF00924 Mechanosensitive ion channel AU29_RS02340 PF12794 Mechanosensitive ion channel inner membrane domain 1 AU29_RS02340 PF12795 Mechanosensitive ion channel porin domain AU29_RS02345 PF04754 Putative transposase, YhgA-like AU29_RS02350 PF10689 Protein of unknown function (DUF2496) AU29_RS02355 PF07445 Primosomal replication protein priC AU29_RS02360 PF04304 Protein of unknown function (DUF454) AU29_RS02365 PF00156 Phosphoribosyl transferase domain AU29_RS02370 PF12169 DNA polymerase III subunits gamma and tau domain III AU29_RS02370 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AU29_RS02370 PF12170 DNA polymerase III tau subunit V interacting with alpha AU29_RS02375 PF02575 YbaB/EbfC DNA-binding family AU29_RS02380 PF13662 Toprim domain AU29_RS02380 PF02132 RecR protein AU29_RS02385 PF00183 Hsp90 protein AU29_RS02385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS02390 PF05191 Adenylate kinase, active site lid AU29_RS02395 PF00762 Ferrochelatase AU29_RS02400 PF07859 alpha/beta hydrolase fold AU29_RS02405 PF00294 pfkB family carbohydrate kinase AU29_RS02410 PF00999 Sodium/hydrogen exchanger family AU29_RS02410 PF02254 TrkA-N domain AU29_RS02415 PF07690 Major Facilitator Superfamily AU29_RS02425 PF04073 Aminoacyl-tRNA editing domain AU29_RS02430 PF01963 TraB family AU29_RS02440 PF00403 Heavy-metal-associated domain AU29_RS02445 PF13411 MerR HTH family regulatory protein AU29_RS02450 PF01957 NfeD-like C-terminal, partner-binding AU29_RS02455 PF16200 C-terminal region of band_7 AU29_RS02455 PF01145 SPFH domain / Band 7 family AU29_RS02460 PF00005 ABC transporter AU29_RS02465 PF03649 Uncharacterised protein family (UPF0014) AU29_RS02470 PF00085 Thioredoxin AU29_RS02475 PF00106 short chain dehydrogenase AU29_RS02480 PF13472 GDSL-like Lipase/Acylhydrolase family AU29_RS02485 PF00005 ABC transporter AU29_RS02500 PF03180 NLPA lipoprotein AU29_RS02505 PF09383 NIL domain AU29_RS02505 PF00005 ABC transporter AU29_RS02510 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS02520 PF03466 LysR substrate binding domain AU29_RS02520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS02525 PF04115 Ureidoglycolate lyase AU29_RS02530 PF01614 Bacterial transcriptional regulator AU29_RS02530 PF09339 IclR helix-turn-helix domain AU29_RS02535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AU29_RS02535 PF00205 Thiamine pyrophosphate enzyme, central domain AU29_RS02535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AU29_RS02540 PF01261 Xylose isomerase-like TIM barrel AU29_RS02545 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AU29_RS02545 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AU29_RS02555 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AU29_RS02560 PF01979 Amidohydrolase family AU29_RS02565 PF00860 Permease family AU29_RS02570 PF02595 Glycerate kinase family AU29_RS02575 PF05899 Protein of unknown function (DUF861) AU29_RS02575 PF07883 Cupin domain AU29_RS02580 PF01546 Peptidase family M20/M25/M40 AU29_RS02585 PF02615 Malate/L-lactate dehydrogenase AU29_RS02590 PF02629 CoA binding domain AU29_RS02590 PF00549 CoA-ligase AU29_RS02595 PF06545 Protein of unknown function (DUF1116) AU29_RS02600 PF11392 Protein of unknown function (DUF2877) AU29_RS02605 PF00696 Amino acid kinase family AU29_RS02610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AU29_RS02610 PF02222 ATP-grasp domain AU29_RS02615 PF00731 AIR carboxylase AU29_RS02620 PF12850 Calcineurin-like phosphoesterase superfamily domain AU29_RS02625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AU29_RS02630 PF01406 tRNA synthetases class I (C) catalytic domain AU29_RS02630 PF09190 DALR domain AU29_RS02645 PF04307 LexA-binding, inner membrane-associated putative hydrolase AU29_RS02655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AU29_RS02655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AU29_RS02660 PF00419 Fimbrial protein AU29_RS02670 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS02670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS02675 PF13954 PapC N-terminal domain AU29_RS02675 PF13953 PapC C-terminal domain AU29_RS02675 PF00577 Outer membrane usher protein AU29_RS02680 PF00419 Fimbrial protein AU29_RS02685 PF00419 Fimbrial protein AU29_RS02690 PF00072 Response regulator receiver domain AU29_RS02690 PF00196 Bacterial regulatory proteins, luxR family AU29_RS02705 PF00196 Bacterial regulatory proteins, luxR family AU29_RS02725 PF00535 Glycosyl transferase family 2 AU29_RS02730 PF04138 GtrA-like protein AU29_RS02740 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS02740 PF00672 HAMP domain AU29_RS02745 PF00873 AcrB/AcrD/AcrF family AU29_RS02750 PF12852 Cupin AU29_RS02750 PF12833 Helix-turn-helix domain AU29_RS02755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS02755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AU29_RS02760 PF07338 Protein of unknown function (DUF1471) AU29_RS02765 PF04224 Protein of unknown function, DUF417 AU29_RS02775 PF00324 Amino acid permease AU29_RS02780 PF00924 Mechanosensitive ion channel AU29_RS02785 PF00657 GDSL-like Lipase/Acylhydrolase AU29_RS02785 PF03797 Autotransporter beta-domain AU29_RS02790 PF00881 Nitroreductase family AU29_RS02795 PF04237 YjbR AU29_RS02800 PF16295 Tetracyclin repressor-like, C-terminal domain AU29_RS02800 PF00440 Bacterial regulatory proteins, tetR family AU29_RS02805 PF12833 Helix-turn-helix domain AU29_RS02810 PF06643 Protein of unknown function (DUF1158) AU29_RS02815 PF04107 Glutamate-cysteine ligase family 2(GCS2) AU29_RS02820 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AU29_RS02820 PF01648 4'-phosphopantetheinyl transferase superfamily AU29_RS02825 PF07715 TonB-dependent Receptor Plug Domain AU29_RS02825 PF00593 TonB dependent receptor AU29_RS02830 PF11806 Domain of unknown function (DUF3327) AU29_RS02830 PF00756 Putative esterase AU29_RS02835 PF03621 MbtH-like protein AU29_RS02840 PF00501 AMP-binding enzyme AU29_RS02840 PF00550 Phosphopantetheine attachment site AU29_RS02840 PF00975 Thioesterase domain AU29_RS02840 PF13193 AMP-binding enzyme C-terminal domain AU29_RS02840 PF00668 Condensation domain AU29_RS02845 PF02706 Chain length determinant protein AU29_RS02850 PF00005 ABC transporter AU29_RS02855 PF01032 FecCD transport family AU29_RS02860 PF01032 FecCD transport family AU29_RS02865 PF05977 Transmembrane secretion effector AU29_RS02870 PF01497 Periplasmic binding protein AU29_RS02875 PF00425 chorismate binding enzyme AU29_RS02880 PF13193 AMP-binding enzyme C-terminal domain AU29_RS02880 PF00501 AMP-binding enzyme AU29_RS02885 PF00857 Isochorismatase family AU29_RS02885 PF00550 Phosphopantetheine attachment site AU29_RS02895 PF03061 Thioesterase superfamily AU29_RS02900 PF13722 5TM C-terminal transporter carbon starvation CstA AU29_RS02900 PF02554 Carbon starvation protein CstA AU29_RS02905 PF04328 Selenoprotein, putative AU29_RS02910 PF00465 Iron-containing alcohol dehydrogenase AU29_RS02915 PF00155 Aminotransferase class I and II AU29_RS02920 PF02195 ParB-like nuclease domain AU29_RS02925 PF11922 Domain of unknown function (DUF3440) AU29_RS02925 PF01507 Phosphoadenosine phosphosulfate reductase family AU29_RS02930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS02930 PF03466 LysR substrate binding domain AU29_RS02935 PF13098 Thioredoxin-like domain AU29_RS02940 PF10417 C-terminal domain of 1-Cys peroxiredoxin AU29_RS02940 PF00578 AhpC/TSA family AU29_RS02945 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS02945 PF13192 Thioredoxin domain AU29_RS02955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS02955 PF01568 Molydopterin dinucleotide binding domain AU29_RS02955 PF00384 Molybdopterin oxidoreductase AU29_RS02960 PF13247 4Fe-4S dicluster domain AU29_RS02970 PF00582 Universal stress protein family AU29_RS02975 PF00107 Zinc-binding dehydrogenase AU29_RS02975 PF13823 Alcohol dehydrogenase GroES-associated AU29_RS02975 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS02980 PF01272 Transcription elongation factor, GreA/GreB, C-term AU29_RS02980 PF14760 Rnk N-terminus AU29_RS02985 PF00445 Ribonuclease T2 family AU29_RS02990 PF00939 Sodium:sulfate symporter transmembrane region AU29_RS02995 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AU29_RS03000 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AU29_RS03005 PF04223 Citrate lyase, alpha subunit (CitF) AU29_RS03010 PF03328 HpcH/HpaI aldolase/citrate lyase family AU29_RS03015 PF06857 Malonate decarboxylase delta subunit (MdcD) AU29_RS03020 PF08218 Citrate lyase ligase C-terminal domain AU29_RS03025 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AU29_RS03025 PF17203 Single cache domain 3 AU29_RS03025 PF00989 PAS fold AU29_RS03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS03030 PF12431 Transcriptional regulator AU29_RS03030 PF00072 Response regulator receiver domain AU29_RS03035 PF03606 C4-dicarboxylate anaerobic carrier AU29_RS03040 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AU29_RS03045 PF00313 'Cold-shock' DNA-binding domain AU29_RS03050 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AU29_RS03055 PF00795 Carbon-nitrogen hydrolase AU29_RS03060 PF02416 mttA/Hcf106 family AU29_RS03065 PF04055 Radical SAM superfamily AU29_RS03065 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AU29_RS03070 PF03466 LysR substrate binding domain AU29_RS03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS03075 PF03099 Biotin/lipoate A/B protein ligase family AU29_RS03080 PF04359 Protein of unknown function (DUF493) AU29_RS03085 PF07943 Penicillin-binding protein 5, C-terminal domain AU29_RS03085 PF00768 D-alanyl-D-alanine carboxypeptidase AU29_RS03090 PF05036 Sporulation related domain AU29_RS03090 PF03330 Lytic transglycolase AU29_RS03095 PF01098 Cell cycle protein AU29_RS03100 PF00905 Penicillin binding protein transpeptidase domain AU29_RS03100 PF03717 Penicillin-binding Protein dimerisation domain AU29_RS03105 PF02590 Predicted SPOUT methyltransferase AU29_RS03120 PF00300 Histidine phosphatase superfamily (branch 1) AU29_RS03125 PF00155 Aminotransferase class I and II AU29_RS03130 PF01467 Cytidylyltransferase-like AU29_RS03135 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AU29_RS03135 PF06144 DNA polymerase III, delta subunit AU29_RS03140 PF04390 Lipopolysaccharide-assembly AU29_RS03145 PF00133 tRNA synthetases class I (I, L, M and V) AU29_RS03145 PF13603 Leucyl-tRNA synthetase, Domain 2 AU29_RS03145 PF08264 Anticodon-binding domain of tRNA AU29_RS03155 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AU29_RS03160 PF03812 2-keto-3-deoxygluconate permease AU29_RS03165 PF00158 Sigma-54 interaction domain AU29_RS03165 PF02954 Bacterial regulatory protein, Fis family AU29_RS03165 PF00989 PAS fold AU29_RS03170 PF07295 Zinc-ribbon containing domain AU29_RS03180 PF06889 Protein of unknown function (DUF1266) AU29_RS03190 PF06889 Protein of unknown function (DUF1266) AU29_RS03200 PF00012 Hsp70 protein AU29_RS03210 PF01156 Inosine-uridine preferring nucleoside hydrolase AU29_RS03215 PF00005 ABC transporter AU29_RS03220 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS03225 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS03230 PF00497 Bacterial extracellular solute-binding proteins, family 3 AU29_RS03235 PF00795 Carbon-nitrogen hydrolase AU29_RS03240 PF03471 Transporter associated domain AU29_RS03240 PF00571 CBS domain AU29_RS03245 PF02130 Uncharacterized protein family UPF0054 AU29_RS03250 PF02562 PhoH-like protein AU29_RS03255 PF00919 Uncharacterized protein family UPF0004 AU29_RS03255 PF04055 Radical SAM superfamily AU29_RS03255 PF01938 TRAM domain AU29_RS03260 PF01494 FAD binding domain AU29_RS03305 PF00733 Asparagine synthase AU29_RS03305 PF13537 Glutamine amidotransferase domain AU29_RS03310 PF13344 Haloacid dehalogenase-like hydrolase AU29_RS03315 PF01047 MarR family AU29_RS03315 PF00480 ROK family AU29_RS03320 PF01979 Amidohydrolase family AU29_RS03325 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AU29_RS03330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AU29_RS03330 PF00367 phosphotransferase system, EIIB AU29_RS03330 PF02378 Phosphotransferase system, EIIC AU29_RS03335 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AU29_RS03335 PF00749 tRNA synthetases class I (E and Q), catalytic domain AU29_RS03340 PF03573 outer membrane porin, OprD family AU29_RS03345 PF13982 YbfN-like lipoprotein AU29_RS03350 PF07690 Major Facilitator Superfamily AU29_RS03360 PF14537 Cytochrome c3 AU29_RS03360 PF00890 FAD binding domain AU29_RS03365 PF03466 LysR substrate binding domain AU29_RS03365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS03370 PF01475 Ferric uptake regulator family AU29_RS03375 PF00258 Flavodoxin AU29_RS03380 PF01402 Ribbon-helix-helix protein, copG family AU29_RS03385 PF12697 Alpha/beta hydrolase family AU29_RS03390 PF17206 SeqA protein N-terminal domain AU29_RS03390 PF03925 SeqA protein C-terminal domain AU29_RS03395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AU29_RS03395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AU29_RS03395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AU29_RS03395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AU29_RS03405 PF13520 Amino acid permease AU29_RS03410 PF01276 Orn/Lys/Arg decarboxylase, major domain AU29_RS03410 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AU29_RS03410 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AU29_RS03420 PF00072 Response regulator receiver domain AU29_RS03420 PF00486 Transcriptional regulatory protein, C terminal AU29_RS03425 PF13492 GAF domain AU29_RS03425 PF13493 Domain of unknown function (DUF4118) AU29_RS03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS03425 PF02702 Osmosensitive K+ channel His kinase sensor domain AU29_RS03425 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS03430 PF02669 K+-transporting ATPase, c chain AU29_RS03440 PF03814 Potassium-transporting ATPase A subunit AU29_RS03445 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) AU29_RS03450 PF10725 Protein of unknown function (DUF2517) AU29_RS03455 PF03441 FAD binding domain of DNA photolyase AU29_RS03455 PF00875 DNA photolyase AU29_RS03460 PF00854 POT family AU29_RS03465 PF01784 NIF3 (NGG1p interacting factor 3) AU29_RS03470 PF02682 Carboxyltransferase domain, subdomain C and D AU29_RS03475 PF02626 Carboxyltransferase domain, subdomain A and B AU29_RS03480 PF03746 LamB/YcsF family AU29_RS03485 PF06827 Zinc finger found in FPG and IleRS AU29_RS03485 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AU29_RS03485 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AU29_RS03490 PF05145 Transition state regulatory protein AbrB AU29_RS03495 PF00285 Citrate synthase, C-terminal domain AU29_RS03505 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AU29_RS03510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AU29_RS03515 PF00890 FAD binding domain AU29_RS03515 PF02910 Fumarate reductase flavoprotein C-term AU29_RS03520 PF13085 2Fe-2S iron-sulfur cluster binding domain AU29_RS03525 PF00676 Dehydrogenase E1 component AU29_RS03525 PF16078 2-oxoglutarate dehydrogenase N-terminus AU29_RS03525 PF02779 Transketolase, pyrimidine binding domain AU29_RS03525 PF16870 2-oxoglutarate dehydrogenase C-terminal AU29_RS03530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AU29_RS03530 PF00364 Biotin-requiring enzyme AU29_RS03530 PF02817 e3 binding domain AU29_RS03535 PF00549 CoA-ligase AU29_RS03535 PF08442 ATP-grasp domain AU29_RS03540 PF02629 CoA binding domain AU29_RS03540 PF00549 CoA-ligase AU29_RS03550 PF01654 Cytochrome bd terminal oxidase subunit I AU29_RS03555 PF02322 Cytochrome bd terminal oxidase subunit II AU29_RS03560 PF08173 Membrane bound YbgT-like protein AU29_RS03565 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AU29_RS03570 PF03061 Thioesterase superfamily AU29_RS03575 PF01618 MotA/TolQ/ExbB proton channel family AU29_RS03580 PF02472 Biopolymer transport protein ExbD/TolR AU29_RS03585 PF06519 TolA C-terminal AU29_RS03590 PF04052 TolB amino-terminal domain AU29_RS03590 PF07676 WD40-like Beta Propeller Repeat AU29_RS03595 PF00691 OmpA family AU29_RS03600 PF16331 TolA binding protein trimerisation AU29_RS03600 PF13174 Tetratricopeptide repeat AU29_RS03640 PF02445 Quinolinate synthetase A protein AU29_RS03645 PF04973 Nicotinamide mononucleotide transporter AU29_RS03650 PF01545 Cation efflux family AU29_RS03655 PF13985 YbgS-like protein AU29_RS03660 PF00793 DAHP synthetase I family AU29_RS03665 PF05681 Fumarate hydratase (Fumerase) AU29_RS03665 PF05683 Fumarase C-terminus AU29_RS03670 PF05681 Fumarate hydratase (Fumerase) AU29_RS03675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS03675 PF03466 LysR substrate binding domain AU29_RS03680 PF03466 LysR substrate binding domain AU29_RS03680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS03685 PF02080 TrkA-C domain AU29_RS03685 PF03600 Citrate transporter AU29_RS03690 PF04277 Oxaloacetate decarboxylase, gamma chain AU29_RS03695 PF02436 Conserved carboxylase domain AU29_RS03695 PF00682 HMGL-like AU29_RS03695 PF00364 Biotin-requiring enzyme AU29_RS03700 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AU29_RS03705 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AU29_RS03710 PF01032 FecCD transport family AU29_RS03715 PF00005 ABC transporter AU29_RS03720 PF00300 Histidine phosphatase superfamily (branch 1) AU29_RS03725 PF01263 Aldose 1-epimerase AU29_RS03730 PF08544 GHMP kinases C terminal AU29_RS03730 PF00288 GHMP kinases N terminal domain AU29_RS03730 PF10509 Galactokinase galactose-binding signature AU29_RS03735 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AU29_RS03735 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AU29_RS03740 PF16363 GDP-mannose 4,6 dehydratase AU29_RS03750 PF00005 ABC transporter AU29_RS03755 PF03459 TOBE domain AU29_RS03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS03760 PF10766 Multidrug efflux pump-associated protein AcrZ AU29_RS03770 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS03775 PF00005 ABC transporter AU29_RS03775 PF03459 TOBE domain AU29_RS03785 PF10282 Lactonase, 7-bladed beta-propeller AU29_RS03790 PF01095 Pectinesterase AU29_RS03795 PF01979 Amidohydrolase family AU29_RS03800 PF00491 Arginase family AU29_RS03805 PF00392 Bacterial regulatory proteins, gntR family AU29_RS03805 PF07702 UTRA domain AU29_RS03810 PF17391 Urocanase N-terminal domain AU29_RS03810 PF01175 Urocanase Rossmann-like domain AU29_RS03810 PF17392 Urocanase C-terminal domain AU29_RS03815 PF00221 Aromatic amino acid lyase AU29_RS03820 PF01161 Phosphatidylethanolamine-binding protein AU29_RS03825 PF00202 Aminotransferase class-III AU29_RS03830 PF06968 Biotin and Thiamin Synthesis associated domain AU29_RS03830 PF04055 Radical SAM superfamily AU29_RS03835 PF00155 Aminotransferase class I and II AU29_RS03840 PF08241 Methyltransferase domain AU29_RS03850 PF00271 Helicase conserved C-terminal domain AU29_RS03850 PF12344 Ultra-violet resistance protein B AU29_RS03850 PF02151 UvrB/uvrC motif AU29_RS03850 PF17757 UvrB interaction domain AU29_RS03850 PF04851 Type III restriction enzyme, res subunit AU29_RS03865 PF01933 Uncharacterised protein family UPF0052 AU29_RS03870 PF04055 Radical SAM superfamily AU29_RS03870 PF06463 Molybdenum Cofactor Synthesis C AU29_RS03875 PF00994 Probable molybdopterin binding domain AU29_RS03880 PF01967 MoaC family AU29_RS03885 PF02597 ThiS family AU29_RS03890 PF02391 MoaE protein AU29_RS03895 PF01027 Inhibitor of apoptosis-promoting Bax1 AU29_RS03915 PF03706 Lysylphosphatidylglycerol synthase TM region AU29_RS03920 PF13091 PLD-like domain AU29_RS03925 PF03372 Endonuclease/Exonuclease/phosphatase family AU29_RS03930 PF11076 Putative inner membrane protein YbhQ AU29_RS03945 PF00005 ABC transporter AU29_RS03950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AU29_RS03955 PF09209 Tetracyclin repressor-like, C-terminal domain AU29_RS03955 PF00440 Bacterial regulatory proteins, tetR family AU29_RS03960 PF00270 DEAD/DEAH box helicase AU29_RS03960 PF00271 Helicase conserved C-terminal domain AU29_RS03965 PF13307 Helicase C-terminal domain AU29_RS03965 PF06733 DEAD_2 AU29_RS03970 PF02885 Glycosyl transferase family, helical bundle domain AU29_RS03975 PF07338 Protein of unknown function (DUF1471) AU29_RS03985 PF01258 Prokaryotic dksA/traR C4-type zinc finger AU29_RS03990 PF05971 RNA methyltransferase AU29_RS03995 PF00924 Mechanosensitive ion channel AU29_RS04000 PF00005 ABC transporter AU29_RS04005 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS04010 PF00497 Bacterial extracellular solute-binding proteins, family 3 AU29_RS04015 PF00210 Ferritin-like domain AU29_RS04020 PF00892 EamA-like transporter family AU29_RS04025 PF13505 Outer membrane protein beta-barrel domain AU29_RS04030 PF00884 Sulfatase AU29_RS04035 PF01325 Iron dependent repressor, N-terminal DNA binding domain AU29_RS04035 PF02742 Iron dependent repressor, metal binding and dimerisation domain AU29_RS04040 PF03600 Citrate transporter AU29_RS04045 PF17969 L,D-transpeptidase C-terminal domain AU29_RS04045 PF03734 L,D-transpeptidase catalytic domain AU29_RS04050 PF12848 ABC transporter AU29_RS04050 PF00005 ABC transporter AU29_RS04065 PF07350 Protein of unknown function (DUF1479) AU29_RS04075 PF01228 Glycine radical AU29_RS04075 PF02901 Pyruvate formate lyase-like AU29_RS04080 PF04055 Radical SAM superfamily AU29_RS04085 PF00899 ThiF family AU29_RS04090 PF03453 MoeA N-terminal region (domain I and II) AU29_RS04090 PF03454 MoeA C-terminal region (domain IV) AU29_RS04090 PF00994 Probable molybdopterin binding domain AU29_RS04095 PF01112 Asparaginase AU29_RS04100 PF00005 ABC transporter AU29_RS04100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AU29_RS04105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AU29_RS04110 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS04115 PF12911 N-terminal TM domain of oligopeptide transport permease C AU29_RS04115 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS04120 PF04055 Radical SAM superfamily AU29_RS04120 PF18693 TRAM domain AU29_RS04120 PF00919 Uncharacterized protein family UPF0004 AU29_RS04125 PF10799 Biofilm formation protein (YliH/bssR) AU29_RS04130 PF03328 HpcH/HpaI aldolase/citrate lyase family AU29_RS04135 PF01012 Electron transfer flavoprotein domain AU29_RS04140 PF01012 Electron transfer flavoprotein domain AU29_RS04140 PF00766 Electron transfer flavoprotein FAD-binding domain AU29_RS04150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AU29_RS04150 PF02770 Acyl-CoA dehydrogenase, middle domain AU29_RS04150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AU29_RS04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS04160 PF03466 LysR substrate binding domain AU29_RS04170 PF07995 Glucose / Sorbosone dehydrogenase AU29_RS04175 PF07995 Glucose / Sorbosone dehydrogenase AU29_RS04180 PF00043 Glutathione S-transferase, C-terminal domain AU29_RS04180 PF13417 Glutathione S-transferase, N-terminal domain AU29_RS04185 PF07943 Penicillin-binding protein 5, C-terminal domain AU29_RS04185 PF00768 D-alanyl-D-alanine carboxypeptidase AU29_RS04190 PF00455 DeoR C terminal sensor domain AU29_RS04190 PF08220 DeoR-like helix-turn-helix domain AU29_RS04195 PF01569 PAP2 superfamily AU29_RS04200 PF07690 Major Facilitator Superfamily AU29_RS04210 PF07690 Major Facilitator Superfamily AU29_RS04215 PF00440 Bacterial regulatory proteins, tetR family AU29_RS04220 PF02080 TrkA-C domain AU29_RS04220 PF06826 Predicted Permease Membrane Region AU29_RS04225 PF11045 Putative inner membrane protein of Enterobacteriaceae AU29_RS04230 PF00462 Glutaredoxin AU29_RS04235 PF07214 Protein of unknown function (DUF1418) AU29_RS04240 PF00881 Nitroreductase family AU29_RS04245 PF08443 RimK-like ATP-grasp domain AU29_RS04245 PF18030 RimK PreATP-grasp domain AU29_RS04250 PF10722 Putative bacterial sensory transduction regulator AU29_RS04255 PF13416 Bacterial extracellular solute-binding protein AU29_RS04260 PF08402 TOBE domain AU29_RS04260 PF00005 ABC transporter AU29_RS04265 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS04270 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS04275 PF10767 Protein of unknown function (DUF2593) AU29_RS04280 PF05958 tRNA (Uracil-5-)-methyltransferase AU29_RS04285 PF03611 PTS system sugar-specific permease component AU29_RS04300 PF00497 Bacterial extracellular solute-binding proteins, family 3 AU29_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS04310 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS04315 PF00497 Bacterial extracellular solute-binding proteins, family 3 AU29_RS04320 PF00005 ABC transporter AU29_RS04325 PF12883 Protein of unknown function (DUF3828) AU29_RS04330 PF01906 Putative heavy-metal-binding AU29_RS04335 PF01510 N-acetylmuramoyl-L-alanine amidase AU29_RS04340 PF01370 NAD dependent epimerase/dehydratase family AU29_RS04345 PF13460 NAD(P)H-binding AU29_RS04345 PF11066 Protein of unknown function (DUF2867) AU29_RS04350 PF01212 Beta-eliminating lyase AU29_RS04355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AU29_RS04355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AU29_RS04355 PF00205 Thiamine pyrophosphate enzyme, central domain AU29_RS04360 PF00175 Oxidoreductase NAD-binding domain AU29_RS04360 PF00111 2Fe-2S iron-sulfur cluster binding domain AU29_RS04360 PF00970 Oxidoreductase FAD-binding domain AU29_RS04365 PF03063 Prismane/CO dehydrogenase family AU29_RS04370 PF03956 Lysine exporter LysO AU29_RS04375 PF11398 Protein of unknown function (DUF2813) AU29_RS04380 PF04393 Protein of unknown function (DUF535) AU29_RS04385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AU29_RS04390 PF02687 FtsX-like permease family AU29_RS04390 PF00005 ABC transporter AU29_RS04390 PF12704 MacB-like periplasmic core domain AU29_RS04395 PF00313 'Cold-shock' DNA-binding domain AU29_RS04400 PF02617 ATP-dependent Clp protease adaptor protein ClpS AU29_RS04405 PF00004 ATPase family associated with various cellular activities (AAA) AU29_RS04405 PF07724 AAA domain (Cdc48 subfamily) AU29_RS04405 PF17871 AAA lid domain AU29_RS04405 PF10431 C-terminal, D2-small domain, of ClpB protein AU29_RS04405 PF02861 Clp amino terminal domain, pathogenicity island component AU29_RS04430 PF00857 Isochorismatase family AU29_RS04435 PF05726 Pirin C-terminal cupin domain AU29_RS04435 PF02678 Pirin AU29_RS04440 PF03466 LysR substrate binding domain AU29_RS04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS04445 PF01176 Translation initiation factor 1A / IF-1 AU29_RS04455 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AU29_RS04460 PF00664 ABC transporter transmembrane region AU29_RS04460 PF00005 ABC transporter AU29_RS04465 PF00005 ABC transporter AU29_RS04465 PF00664 ABC transporter transmembrane region AU29_RS04470 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS04475 PF01037 Lrp/AsnC ligand binding domain AU29_RS04480 PF17854 FtsK alpha domain AU29_RS04480 PF09397 Ftsk gamma domain AU29_RS04480 PF01580 FtsK/SpoIIIE family AU29_RS04480 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AU29_RS04485 PF03548 Outer membrane lipoprotein carrier protein LolA AU29_RS04490 PF00004 ATPase family associated with various cellular activities (AAA) AU29_RS04490 PF16193 AAA C-terminal domain AU29_RS04490 PF12002 MgsA AAA+ ATPase C terminal AU29_RS04495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AU29_RS04495 PF02403 Seryl-tRNA synthetase N-terminal domain AU29_RS04500 PF01568 Molydopterin dinucleotide binding domain AU29_RS04500 PF00384 Molybdopterin oxidoreductase AU29_RS04500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS04505 PF13247 4Fe-4S dicluster domain AU29_RS04505 PF12800 4Fe-4S binding domain AU29_RS04510 PF04976 DMSO reductase anchor subunit (DmsC) AU29_RS04520 PF07690 Major Facilitator Superfamily AU29_RS04525 PF13520 Amino acid permease AU29_RS04530 PF04055 Radical SAM superfamily AU29_RS04535 PF11047 Salmonella outer protein D AU29_RS04540 PF02901 Pyruvate formate lyase-like AU29_RS04540 PF01228 Glycine radical AU29_RS04545 PF01226 Formate/nitrite transporter AU29_RS04550 PF18381 YcaO cyclodehydratase C-terminal domain AU29_RS04550 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AU29_RS04555 PF04239 Protein of unknown function (DUF421) AU29_RS04560 PF00266 Aminotransferase class-V AU29_RS04565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AU29_RS04570 PF01435 Peptidase family M48 AU29_RS04575 PF02224 Cytidylate kinase AU29_RS04580 PF00575 S1 RNA binding domain AU29_RS04585 PF00216 Bacterial DNA-binding protein AU29_RS04590 PF00753 Metallo-beta-lactamase superfamily AU29_RS04590 PF03772 Competence protein AU29_RS04595 PF00664 ABC transporter transmembrane region AU29_RS04595 PF00005 ABC transporter AU29_RS04600 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AU29_RS04605 PF06224 Winged helix DNA-binding domain AU29_RS04610 PF03966 Trm112p-like protein AU29_RS04615 PF02348 Cytidylyltransferase AU29_RS04620 PF01636 Phosphotransferase enzyme family AU29_RS04625 PF02698 DUF218 domain AU29_RS04630 PF13847 Methyltransferase domain AU29_RS04635 PF03882 MukF winged-helix domain AU29_RS04635 PF17193 MukF C-terminal domain AU29_RS04635 PF17192 MukF middle domain AU29_RS04640 PF04288 MukE-like family AU29_RS04645 PF16330 MukB hinge domain AU29_RS04645 PF04310 MukB N-terminal AU29_RS04650 PF01471 Putative peptidoglycan binding domain AU29_RS04650 PF03734 L,D-transpeptidase catalytic domain AU29_RS04655 PF05951 Bacterial protein of unknown function (DUF882) AU29_RS04660 PF00753 Metallo-beta-lactamase superfamily AU29_RS04665 PF00155 Aminotransferase class I and II AU29_RS04670 PF00267 Gram-negative porin AU29_RS04675 PF01336 OB-fold nucleic acid binding domain AU29_RS04675 PF00152 tRNA synthetases class II (D, K and N) AU29_RS04680 PF01037 Lrp/AsnC ligand binding domain AU29_RS04680 PF13404 AsnC-type helix-turn-helix domain AU29_RS04685 PF00291 Pyridoxal-phosphate dependent enzyme AU29_RS04690 PF01235 Sodium:alanine symporter family AU29_RS04695 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AU29_RS04695 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AU29_RS04700 PF12167 Arm DNA-binding domain AU29_RS04700 PF00589 Phage integrase family AU29_RS04715 PF03335 Phage tail fibre repeat AU29_RS04715 PF07484 Phage Tail Collar Domain AU29_RS04720 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AU29_RS04725 PF15645 Dermonecrotoxin of the Papain-like fold AU29_RS04730 PF13817 IS66 C-terminal element AU29_RS04730 PF13005 zinc-finger binding domain of transposase IS66 AU29_RS04730 PF13007 Transposase C of IS166 homeodomain AU29_RS04730 PF03050 Transposase IS66 family AU29_RS04735 PF02586 SOS response associated peptidase (SRAP) AU29_RS04750 PF06183 DinI-like family AU29_RS04755 PF11940 Domain of unknown function (DUF3458) Ig-like fold AU29_RS04755 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AU29_RS04755 PF01433 Peptidase family M1 domain AU29_RS04760 PF01180 Dihydroorotate dehydrogenase AU29_RS04765 PF07126 Cell-division protein ZapC AU29_RS04770 PF03476 MOSC N-terminal beta barrel domain AU29_RS04770 PF03473 MOSC domain AU29_RS04770 PF00111 2Fe-2S iron-sulfur cluster binding domain AU29_RS04775 PF10672 S-adenosylmethionine-dependent methyltransferase AU29_RS04775 PF02926 THUMP domain AU29_RS04775 PF01170 Putative RNA methylase family UPF0020 AU29_RS04780 PF16326 ABC transporter C-terminal domain AU29_RS04780 PF12848 ABC transporter AU29_RS04780 PF00005 ABC transporter AU29_RS04785 PF04403 Paraquat-inducible protein A AU29_RS04790 PF02470 MlaD protein AU29_RS04795 PF03886 ABC-type transport auxiliary lipoprotein component AU29_RS04800 PF04957 Ribosome modulation factor AU29_RS04805 PF07977 FabA-like domain AU29_RS04810 PF13654 AAA domain AU29_RS04810 PF05362 Lon protease (S16) C-terminal proteolytic domain AU29_RS04815 PF06303 MatP N-terminal domain AU29_RS04815 PF17414 MatP C-terminal ribbon-helix-helix domain AU29_RS04820 PF00691 OmpA family AU29_RS04820 PF01389 OmpA-like transmembrane domain AU29_RS04825 PF03846 Cell division inhibitor SulA AU29_RS04830 PF04994 TfoX C-terminal domain AU29_RS04830 PF04993 TfoX N-terminal domain AU29_RS04835 PF12805 FUSC-like inner membrane protein yccS AU29_RS04840 PF03733 Inner membrane component domain AU29_RS04845 PF12462 DNA helicase IV / RNA helicase N terminal AU29_RS04845 PF13361 UvrD-like helicase C-terminal domain AU29_RS04845 PF00580 UvrD/REP helicase N-terminal domain AU29_RS04850 PF02142 MGS-like domain AU29_RS04855 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AU29_RS04860 PF13380 CoA binding domain AU29_RS04865 PF08755 Hemimethylated DNA-binding protein YccV like AU29_RS04870 PF10672 S-adenosylmethionine-dependent methyltransferase AU29_RS04870 PF17785 PUA-like domain AU29_RS04875 PF01161 Phosphatidylethanolamine-binding protein AU29_RS04880 PF12833 Helix-turn-helix domain AU29_RS04885 PF00708 Acylphosphatase AU29_RS04890 PF04358 DsrC like protein AU29_RS04895 PF01027 Inhibitor of apoptosis-promoting Bax1 AU29_RS04910 PF00805 Pentapeptide repeats (8 copies) AU29_RS04925 PF07824 Type III secretion chaperone domain AU29_RS04930 PF05925 Enterobacterial virulence protein IpgD AU29_RS04935 PF13132 Domain of unknown function (DUF3950) AU29_RS04945 PF03577 Peptidase family C69 AU29_RS04950 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS04955 PF00072 Response regulator receiver domain AU29_RS04955 PF00486 Transcriptional regulatory protein, C terminal AU29_RS04960 PF00576 HIUase/Transthyretin family AU29_RS04965 PF01613 Flavin reductase like domain AU29_RS04970 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AU29_RS04970 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AU29_RS04975 PF01047 MarR family AU29_RS04980 PF01557 Fumarylacetoacetate (FAA) hydrolase family AU29_RS04985 PF00171 Aldehyde dehydrogenase family AU29_RS04990 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AU29_RS04995 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AU29_RS05000 PF01557 Fumarylacetoacetate (FAA) hydrolase family AU29_RS05005 PF03328 HpcH/HpaI aldolase/citrate lyase family AU29_RS05010 PF07690 Major Facilitator Superfamily AU29_RS05020 PF12706 Beta-lactamase superfamily domain AU29_RS05035 PF01556 DnaJ C terminal domain AU29_RS05035 PF00226 DnaJ domain AU29_RS05045 PF02683 Cytochrome C biogenesis protein transmembrane region AU29_RS05045 PF13098 Thioredoxin-like domain AU29_RS05045 PF11412 Disulphide bond corrector protein DsbC AU29_RS05050 PF13462 Thioredoxin AU29_RS05050 PF06965 Na+/H+ antiporter 1 AU29_RS05055 PF00578 AhpC/TSA family AU29_RS05065 PF13993 YccJ-like protein AU29_RS05070 PF03358 NADPH-dependent FMN reductase AU29_RS05075 PF10685 Stress-induced bacterial acidophilic repeat motif AU29_RS05080 PF00440 Bacterial regulatory proteins, tetR family AU29_RS05080 PF08362 YcdC-like protein, C-terminal region AU29_RS05090 PF14850 DNA-binding domain of Proline dehydrogenase AU29_RS05090 PF01619 Proline dehydrogenase AU29_RS05090 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AU29_RS05090 PF00171 Aldehyde dehydrogenase family AU29_RS05095 PF00474 Sodium:solute symporter family AU29_RS05105 PF02562 PhoH-like protein AU29_RS05110 PF01418 Helix-turn-helix domain, rpiR family AU29_RS05110 PF01380 SIS domain AU29_RS05115 PF00474 Sodium:solute symporter family AU29_RS05120 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AU29_RS05125 PF01344 Kelch motif AU29_RS05130 PF06178 Oligogalacturonate-specific porin protein (KdgM) AU29_RS05135 PF07690 Major Facilitator Superfamily AU29_RS05140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AU29_RS05140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AU29_RS05180 PF05638 Type VI secretion system effector, Hcp AU29_RS05220 PF01527 Transposase AU29_RS05245 PF00313 'Cold-shock' DNA-binding domain AU29_RS05250 PF00267 Gram-negative porin AU29_RS05260 PF01966 HD domain AU29_RS05265 PF18284 DNA methylase N-terminal domain AU29_RS05265 PF00145 C-5 cytosine-specific DNA methylase AU29_RS05270 PF03852 DNA mismatch endonuclease Vsr AU29_RS05275 PF00892 EamA-like transporter family AU29_RS05280 PF05661 Protein of unknown function (DUF808) AU29_RS05285 PF09926 Uncharacterized small protein (DUF2158) AU29_RS05290 PF17151 Periplasmic sensor domain AU29_RS05290 PF00990 Diguanylate cyclase, GGDEF domain AU29_RS05300 PF10733 Protein of unknown function (DUF2525) AU29_RS05305 PF10781 Dextransucrase DSRB AU29_RS05310 PF00196 Bacterial regulatory proteins, luxR family AU29_RS05315 PF01311 Bacterial export proteins, family 1 AU29_RS05320 PF01313 Bacterial export proteins, family 3 AU29_RS05325 PF00813 FliP family AU29_RS05330 PF04347 Flagellar biosynthesis protein, FliO AU29_RS05335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AU29_RS05335 PF16973 Flagellar motor switch protein FliN N-terminal AU29_RS05340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AU29_RS05340 PF02154 Flagellar motor switch protein FliM AU29_RS05345 PF03748 Flagellar basal body-associated protein FliL AU29_RS05350 PF02120 Flagellar hook-length control protein FliK AU29_RS05355 PF02050 Flagellar FliJ protein AU29_RS05360 PF18269 T3SS EscN ATPase C-terminal domain AU29_RS05360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AU29_RS05365 PF02108 Flagellar assembly protein FliH AU29_RS05370 PF01706 FliG C-terminal domain AU29_RS05370 PF14841 FliG middle domain AU29_RS05370 PF14842 FliG N-terminal domain AU29_RS05375 PF08345 Flagellar M-ring protein C-terminal AU29_RS05375 PF01514 Secretory protein of YscJ/FliF family AU29_RS05380 PF02049 Flagellar hook-basal body complex protein FliE AU29_RS05390 PF01206 Sulfurtransferase TusA AU29_RS05395 PF04143 Sulphur transport AU29_RS05400 PF13987 YedD-like protein AU29_RS05405 PF00128 Alpha amylase, catalytic domain AU29_RS05405 PF02806 Alpha amylase, C-terminal all-beta domain AU29_RS05410 PF05400 Flagellar protein FliT AU29_RS05415 PF02561 Flagellar protein FliS AU29_RS05420 PF07195 Flagellar hook-associated protein 2 C-terminus AU29_RS05420 PF02465 Flagellar hook-associated protein 2 N-terminus AU29_RS05420 PF07196 Flagellin hook IN motif AU29_RS05430 PF00700 Bacterial flagellin C-terminal helical region AU29_RS05430 PF00669 Bacterial flagellin N-terminal helical region AU29_RS05440 PF04542 Sigma-70 region 2 AU29_RS05440 PF04545 Sigma-70, region 4 AU29_RS05440 PF04539 Sigma-70 region 3 AU29_RS05445 PF02899 Phage integrase, N-terminal SAM-like domain AU29_RS05450 PF00497 Bacterial extracellular solute-binding proteins, family 3 AU29_RS05455 PF00291 Pyridoxal-phosphate dependent enzyme AU29_RS05460 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS05465 PF00005 ABC transporter AU29_RS05470 PF00196 Bacterial regulatory proteins, luxR family AU29_RS05470 PF03472 Autoinducer binding domain AU29_RS05475 PF10769 Protein of unknown function (DUF2594) AU29_RS05485 PF00196 Bacterial regulatory proteins, luxR family AU29_RS05485 PF00072 Response regulator receiver domain AU29_RS05490 PF08459 UvrC Helix-hairpin-helix N-terminal AU29_RS05490 PF02151 UvrB/uvrC motif AU29_RS05490 PF01541 GIY-YIG catalytic domain AU29_RS05495 PF01066 CDP-alcohol phosphatidyltransferase AU29_RS05530 PF02810 SEC-C motif AU29_RS05530 PF03695 Uncharacterised protein family (UPF0149) AU29_RS05535 PF03222 Tryptophan/tyrosine permease family AU29_RS05540 PF10678 Protein of unknown function (DUF2492) AU29_RS05545 PF00210 Ferritin-like domain AU29_RS05550 PF13992 YecR-like lipoprotein AU29_RS05560 PF00210 Ferritin-like domain AU29_RS05570 PF02653 Branched-chain amino acid transport system / permease component AU29_RS05575 PF02358 Trehalose-phosphatase AU29_RS05580 PF00982 Glycosyltransferase family 20 AU29_RS05585 PF00582 Universal stress protein family AU29_RS05595 PF05247 Flagellar transcriptional activator (FlhD) AU29_RS05600 PF05280 Flagellar transcriptional activator (FlhC) AU29_RS05605 PF01618 MotA/TolQ/ExbB proton channel family AU29_RS05610 PF13677 Membrane MotB of proton-channel complex MotA/MotB AU29_RS05610 PF00691 OmpA family AU29_RS05615 PF09078 CheY binding AU29_RS05615 PF02895 Signal transducing histidine kinase, homodimeric domain AU29_RS05615 PF01627 Hpt domain AU29_RS05615 PF01584 CheW-like domain AU29_RS05615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS05620 PF01584 CheW-like domain AU29_RS05625 PF02203 Tar ligand binding domain homologue AU29_RS05625 PF00672 HAMP domain AU29_RS05625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AU29_RS05630 PF01739 CheR methyltransferase, SAM binding domain AU29_RS05630 PF03705 CheR methyltransferase, all-alpha domain AU29_RS05635 PF00072 Response regulator receiver domain AU29_RS05635 PF01339 CheB methylesterase AU29_RS05640 PF00072 Response regulator receiver domain AU29_RS05645 PF04344 Chemotaxis phosphatase, CheZ AU29_RS05650 PF01312 FlhB HrpN YscU SpaS Family AU29_RS05655 PF00771 FHIPEP family AU29_RS05660 PF06366 Flagellar protein FlhE AU29_RS05665 PF07470 Glycosyl Hydrolase Family 88 AU29_RS05670 PF00905 Penicillin binding protein transpeptidase domain AU29_RS05670 PF03717 Penicillin-binding Protein dimerisation domain AU29_RS05675 PF05746 DALR anticodon binding domain AU29_RS05675 PF03485 Arginyl tRNA synthetase N terminal domain AU29_RS05675 PF00750 tRNA synthetases class I (R) AU29_RS05680 PF06185 YecM protein AU29_RS05685 PF03932 CutC family AU29_RS05690 PF08003 Protein of unknown function (DUF1698) AU29_RS05695 PF13649 Methyltransferase domain AU29_RS05700 PF01124 MAPEG family AU29_RS05705 PF01904 Protein of unknown function DUF72 AU29_RS05710 PF00857 Isochorismatase family AU29_RS05715 PF02938 GAD domain AU29_RS05715 PF00152 tRNA synthetases class II (D, K and N) AU29_RS05715 PF01336 OB-fold nucleic acid binding domain AU29_RS05720 PF00293 NUDIX domain AU29_RS05725 PF01709 Transcriptional regulator AU29_RS05730 PF02075 Crossover junction endodeoxyribonuclease RuvC AU29_RS05735 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AU29_RS05745 PF01330 RuvA N terminal domain AU29_RS05745 PF07499 RuvA, C-terminal domain AU29_RS05750 PF17864 RuvB AAA lid domain AU29_RS05750 PF05496 Holliday junction DNA helicase RuvB P-loop domain AU29_RS05750 PF05491 RuvB C-terminal winged helix domain AU29_RS05755 PF00950 ABC 3 transport family AU29_RS05760 PF00005 ABC transporter AU29_RS05765 PF01297 Zinc-uptake complex component A periplasmic AU29_RS05770 PF01551 Peptidase family M23 AU29_RS05770 PF08525 Opacity-associated protein A N-terminal motif AU29_RS05770 PF01476 LysM domain AU29_RS05775 PF03279 Bacterial lipid A biosynthesis acyltransferase AU29_RS05780 PF02887 Pyruvate kinase, alpha/beta domain AU29_RS05780 PF00224 Pyruvate kinase, barrel domain AU29_RS05785 PF01418 Helix-turn-helix domain, rpiR family AU29_RS05785 PF01380 SIS domain AU29_RS05790 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AU29_RS05790 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AU29_RS05795 PF00920 Dehydratase family AU29_RS05800 PF01081 KDPG and KHG aldolase AU29_RS05805 PF02222 ATP-grasp domain AU29_RS05810 PF07130 YebG protein AU29_RS05815 PF13995 YebF-like protein AU29_RS05820 PF04391 Protein of unknown function (DUF533) AU29_RS05825 PF00326 Prolyl oligopeptidase family AU29_RS05825 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AU29_RS05830 PF00929 Exonuclease AU29_RS05835 PF00795 Carbon-nitrogen hydrolase AU29_RS05840 PF06440 DNA polymerase III, theta subunit AU29_RS05845 PF04234 CopC domain AU29_RS05850 PF05425 Copper resistance protein D AU29_RS05855 PF10709 Protein of unknown function (DUF2511) AU29_RS05875 PF14864 Alkyl sulfatase C-terminal AU29_RS05875 PF00753 Metallo-beta-lactamase superfamily AU29_RS05875 PF14863 Alkyl sulfatase dimerisation AU29_RS05930 PF03245 Bacteriophage Rz lysis protein AU29_RS05940 PF06316 Enterobacterial Ail/Lom protein AU29_RS05945 PF00080 Copper/zinc superoxide dismutase (SODC) AU29_RS05965 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AU29_RS05970 PF05364 Salmonella type III secretion SopE effector N-terminus AU29_RS05970 PF07487 SopE GEF domain AU29_RS05995 PF12684 PDDEXK-like domain of unknown function (DUF3799) AU29_RS05995 PF06630 Enterobacterial exodeoxyribonuclease VIII AU29_RS06005 PF10721 Protein of unknown function (DUF2514) AU29_RS06035 PF03335 Phage tail fibre repeat AU29_RS06035 PF07484 Phage Tail Collar Domain AU29_RS06045 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AU29_RS06055 PF02040 Arsenical pump membrane protein AU29_RS06070 PF00892 EamA-like transporter family AU29_RS06085 PF00872 Transposase, Mutator family AU29_RS06100 PF00583 Acetyltransferase (GNAT) family AU29_RS06110 PF07166 Protein of unknown function (DUF1398) AU29_RS06115 PF05364 Salmonella type III secretion SopE effector N-terminus AU29_RS06115 PF07487 SopE GEF domain AU29_RS06125 PF00149 Calcineurin-like phosphoesterase AU29_RS06130 PF07358 Protein of unknown function (DUF1482) AU29_RS06135 PF07351 Protein of unknown function (DUF1480) AU29_RS06140 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AU29_RS06140 PF01189 16S rRNA methyltransferase RsmB/F AU29_RS06140 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AU29_RS06145 PF02470 MlaD protein AU29_RS06150 PF04403 Paraquat-inducible protein A AU29_RS06155 PF13185 GAF domain AU29_RS06160 PF04352 ProQ/FINO family AU29_RS06160 PF17516 ProQ C-terminal domain AU29_RS06165 PF17804 Tail specific protease N-terminal domain AU29_RS06165 PF03572 Peptidase family S41 AU29_RS06165 PF11818 C-terminal domain of tail specific protease (DUF3340) AU29_RS06165 PF00595 PDZ domain AU29_RS06170 PF01435 Peptidase family M48 AU29_RS06175 PF07690 Major Facilitator Superfamily AU29_RS06180 PF09339 IclR helix-turn-helix domain AU29_RS06180 PF01614 Bacterial transcriptional regulator AU29_RS06185 PF13996 YobH-like protein AU29_RS06190 PF13998 MgrB protein AU29_RS06195 PF13974 YebO-like protein AU29_RS06200 PF10736 Protein of unknown function (DUF2627) AU29_RS06205 PF00313 'Cold-shock' DNA-binding domain AU29_RS06210 PF03717 Penicillin-binding Protein dimerisation domain AU29_RS06210 PF00905 Penicillin binding protein transpeptidase domain AU29_RS06215 PF13847 Methyltransferase domain AU29_RS06220 PF02659 Putative manganese efflux pump AU29_RS06225 PF06173 Protein of unknown function (DUF986) AU29_RS06230 PF03613 PTS system mannose/fructose/sorbose family IID component AU29_RS06235 PF03609 PTS system sorbose-specific iic component AU29_RS06240 PF03830 PTS system sorbose subfamily IIB component AU29_RS06240 PF03610 PTS system fructose IIA component AU29_RS06250 PF03471 Transporter associated domain AU29_RS06250 PF03741 Integral membrane protein TerC family AU29_RS06255 PF00563 EAL domain AU29_RS06255 PF12792 CSS motif domain associated with EAL AU29_RS06260 PF03313 Serine dehydratase alpha chain AU29_RS06260 PF03315 Serine dehydratase beta chain AU29_RS06265 PF00293 NUDIX domain AU29_RS06270 PF00425 chorismate binding enzyme AU29_RS06270 PF04715 Anthranilate synthase component I, N terminal region AU29_RS06275 PF03701 Uncharacterised protein family (UPF0181) AU29_RS06280 PF01042 Endoribonuclease L-PSP AU29_RS06285 PF13307 Helicase C-terminal domain AU29_RS06285 PF04851 Type III restriction enzyme, res subunit AU29_RS06290 PF00814 Glycoprotease family AU29_RS06295 PF03843 Outer membrane lipoprotein Slp family AU29_RS06300 PF13193 AMP-binding enzyme C-terminal domain AU29_RS06300 PF00501 AMP-binding enzyme AU29_RS06305 PF01612 3'-5' exonuclease AU29_RS06305 PF00570 HRDC domain AU29_RS06310 PF03776 Septum formation topological specificity factor MinE AU29_RS06315 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AU29_RS06320 PF03775 Septum formation inhibitor MinC, C-terminal domain AU29_RS06320 PF05209 Septum formation inhibitor MinC, N-terminal domain AU29_RS06325 PF05166 YcgL domain AU29_RS06330 PF01557 Fumarylacetoacetate (FAA) hydrolase family AU29_RS06335 PF03692 Putative zinc- or iron-chelating domain AU29_RS06345 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system AU29_RS06355 PF02600 Disulfide bond formation protein DsbB AU29_RS06360 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AU29_RS06365 PF00392 Bacterial regulatory proteins, gntR family AU29_RS06365 PF07840 FadR C-terminal domain AU29_RS06370 PF04293 SpoVR like protein AU29_RS06375 PF01266 FAD dependent oxidoreductase AU29_RS06380 PF01168 Alanine racemase, N-terminal domain AU29_RS06380 PF00842 Alanine racemase, C-terminal domain AU29_RS06385 PF03471 Transporter associated domain AU29_RS06385 PF00999 Sodium/hydrogen exchanger family AU29_RS06385 PF02080 TrkA-C domain AU29_RS06390 PF02016 LD-carboxypeptidase N-terminal domain AU29_RS06390 PF17676 LD-carboxypeptidase C-terminal domain AU29_RS06395 PF01464 Transglycosylase SLT domain AU29_RS06400 PF07317 Flagellar regulator YcgR AU29_RS06400 PF07238 PilZ domain AU29_RS06405 PF04226 Transglycosylase associated protein AU29_RS06410 PF01204 Trehalase AU29_RS06415 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AU29_RS06415 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AU29_RS06420 PF08173 Membrane bound YbgT-like protein AU29_RS06425 PF02322 Cytochrome bd terminal oxidase subunit II AU29_RS06430 PF01654 Cytochrome bd terminal oxidase subunit I AU29_RS06435 PF04809 HupH hydrogenase expression protein, C-terminal conserved region AU29_RS06440 PF07449 Hydrogenase-1 expression protein HyaE AU29_RS06445 PF01750 Hydrogenase maturation protease AU29_RS06450 PF01292 Prokaryotic cytochrome b561 AU29_RS06455 PF00374 Nickel-dependent hydrogenase AU29_RS06460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AU29_RS06460 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AU29_RS06475 PF01926 50S ribosome-binding GTPase AU29_RS06475 PF06071 Protein of unknown function (DUF933) AU29_RS06480 PF01195 Peptidyl-tRNA hydrolase AU29_RS06485 PF10762 Protein of unknown function (DUF2583) AU29_RS06490 PF01740 STAS domain AU29_RS06490 PF00916 Sulfate permease family AU29_RS06495 PF14572 Phosphoribosyl synthetase-associated domain AU29_RS06495 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AU29_RS06500 PF08544 GHMP kinases C terminal AU29_RS06500 PF00288 GHMP kinases N terminal domain AU29_RS06505 PF03550 Outer membrane lipoprotein LolB AU29_RS06510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AU29_RS06510 PF01488 Shikimate / quinate 5-dehydrogenase AU29_RS06510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AU29_RS06515 PF03462 PCRF domain AU29_RS06515 PF00472 RF-1 domain AU29_RS06520 PF13847 Methyltransferase domain AU29_RS06520 PF17827 PrmC N-terminal domain AU29_RS06525 PF04247 Invasion gene expression up-regulator, SirB AU29_RS06530 PF13369 Transglutaminase-like superfamily AU29_RS06535 PF00793 DAHP synthetase I family AU29_RS06540 PF01699 Sodium/calcium exchanger protein AU29_RS06545 PF06150 ChaB AU29_RS06550 PF02635 DsrE/DsrF-like family AU29_RS06555 PF11924 Inverse autotransporter, beta-domain AU29_RS06560 PF00072 Response regulator receiver domain AU29_RS06560 PF00196 Bacterial regulatory proteins, luxR family AU29_RS06565 PF00672 HAMP domain AU29_RS06565 PF07730 Histidine kinase AU29_RS06565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS06565 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AU29_RS06570 PF07690 Major Facilitator Superfamily AU29_RS06575 PF00384 Molybdopterin oxidoreductase AU29_RS06575 PF01568 Molydopterin dinucleotide binding domain AU29_RS06575 PF14710 Respiratory nitrate reductase alpha N-terminal AU29_RS06580 PF14711 Respiratory nitrate reductase beta C-terminal AU29_RS06580 PF13247 4Fe-4S dicluster domain AU29_RS06585 PF02613 Nitrate reductase delta subunit AU29_RS06590 PF02665 Nitrate reductase gamma subunit AU29_RS06615 PF00551 Formyl transferase AU29_RS06615 PF01842 ACT domain AU29_RS06620 PF02810 SEC-C motif AU29_RS06625 PF01734 Patatin-like phospholipase AU29_RS06630 PF00072 Response regulator receiver domain AU29_RS06635 PF00483 Nucleotidyl transferase AU29_RS06640 PF00816 H-NS histone family AU29_RS06645 PF00265 Thymidine kinase AU29_RS06650 PF00465 Iron-containing alcohol dehydrogenase AU29_RS06650 PF00171 Aldehyde dehydrogenase family AU29_RS06655 PF01914 MarC family integral membrane protein AU29_RS06660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AU29_RS06665 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS06670 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS06670 PF12911 N-terminal TM domain of oligopeptide transport permease C AU29_RS06675 PF00005 ABC transporter AU29_RS06675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AU29_RS06680 PF00005 ABC transporter AU29_RS06680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AU29_RS06685 PF00027 Cyclic nucleotide-binding domain AU29_RS06685 PF00520 Ion transport protein AU29_RS06690 PF04269 Protein of unknown function, DUF440 AU29_RS06695 PF13091 PLD-like domain AU29_RS06695 PF13396 Phospholipase_D-nuclease N-terminal AU29_RS06700 PF03795 YCII-related domain AU29_RS06705 PF03544 Gram-negative bacterial TonB protein C-terminal AU29_RS06710 PF03061 Thioesterase superfamily AU29_RS06715 PF04279 Intracellular septation protein A AU29_RS06725 PF03692 Putative zinc- or iron-chelating domain AU29_RS06730 PF03922 OmpW family AU29_RS06735 PF05067 Manganese containing catalase AU29_RS06740 PF05974 Domain of unknown function (DUF892) AU29_RS06745 PF05974 Domain of unknown function (DUF892) AU29_RS06750 PF10685 Stress-induced bacterial acidophilic repeat motif AU29_RS06755 PF00290 Tryptophan synthase alpha chain AU29_RS06760 PF00291 Pyridoxal-phosphate dependent enzyme AU29_RS06765 PF00218 Indole-3-glycerol phosphate synthase AU29_RS06765 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AU29_RS06770 PF00591 Glycosyl transferase family, a/b domain AU29_RS06770 PF02885 Glycosyl transferase family, helical bundle domain AU29_RS06770 PF00117 Glutamine amidotransferase class-I AU29_RS06775 PF00425 chorismate binding enzyme AU29_RS06775 PF04715 Anthranilate synthase component I, N terminal region AU29_RS06780 PF02811 PHP domain AU29_RS06785 PF01300 Telomere recombination AU29_RS06790 PF01479 S4 domain AU29_RS06790 PF00849 RNA pseudouridylate synthase AU29_RS06795 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AU29_RS06800 PF00106 short chain dehydrogenase AU29_RS06805 PF01343 Peptidase family S49 AU29_RS06805 PF08496 Peptidase family S49 N-terminal AU29_RS06810 PF10692 Protein of unknown function (DUF2498) AU29_RS06815 PF01751 Toprim domain AU29_RS06815 PF08272 Topoisomerase I zinc-ribbon-like AU29_RS06815 PF01131 DNA topoisomerase AU29_RS06815 PF01396 Topoisomerase DNA binding C4 zinc finger AU29_RS06820 PF03466 LysR substrate binding domain AU29_RS06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS06830 PF00330 Aconitase family (aconitate hydratase) AU29_RS06830 PF00694 Aconitase C-terminal domain AU29_RS06835 PF00925 GTP cyclohydrolase II AU29_RS06840 PF01569 PAP2 superfamily AU29_RS06845 PF06305 Lipopolysaccharide assembly protein A domain AU29_RS06850 PF18073 Rubredoxin metal binding domain AU29_RS06855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AU29_RS06860 PF01253 Translation initiation factor SUI1 AU29_RS06865 PF05433 Glycine zipper 2TM domain AU29_RS06870 PF00455 DeoR C terminal sensor domain AU29_RS06870 PF08220 DeoR-like helix-turn-helix domain AU29_RS06880 PF00563 EAL domain AU29_RS06880 PF00990 Diguanylate cyclase, GGDEF domain AU29_RS06880 PF13426 PAS domain AU29_RS06885 PF00773 RNB domain AU29_RS06885 PF17876 Cold shock domain AU29_RS06885 PF08206 Ribonuclease B OB domain AU29_RS06885 PF00575 S1 RNA binding domain AU29_RS06920 PF00005 ABC transporter AU29_RS06925 PF00005 ABC transporter AU29_RS06925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AU29_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS06930 PF12911 N-terminal TM domain of oligopeptide transport permease C AU29_RS06935 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS06940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AU29_RS06945 PF02954 Bacterial regulatory protein, Fis family AU29_RS06945 PF00158 Sigma-54 interaction domain AU29_RS06950 PF04012 PspA/IM30 family AU29_RS06955 PF06667 Phage shock protein B AU29_RS06960 PF04024 PspC domain AU29_RS06965 PF09584 Phage shock protein PspD (Phageshock_PspD) AU29_RS06970 PF00581 Rhodanese-like domain AU29_RS06975 PF04317 YcjX-like family, DUF463 AU29_RS06980 PF05128 Domain of unknown function (DUF697) AU29_RS06985 PF18024 Helix-turn-helix domain AU29_RS06985 PF00158 Sigma-54 interaction domain AU29_RS06990 PF08534 Redoxin AU29_RS06995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AU29_RS06995 PF13378 Enolase C-terminal domain-like AU29_RS07000 PF00246 Zinc carboxypeptidase AU29_RS07005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AU29_RS07015 PF03466 LysR substrate binding domain AU29_RS07015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS07020 PF00248 Aldo/keto reductase family AU29_RS07030 PF00440 Bacterial regulatory proteins, tetR family AU29_RS07045 PF12833 Helix-turn-helix domain AU29_RS07045 PF06445 GyrI-like small molecule binding domain AU29_RS07070 PF08534 Redoxin AU29_RS07090 PF00924 Mechanosensitive ion channel AU29_RS07095 PF10749 Protein of unknown function (DUF2534) AU29_RS07100 PF00582 Universal stress protein family AU29_RS07105 PF13545 Crp-like helix-turn-helix domain AU29_RS07105 PF00027 Cyclic nucleotide-binding domain AU29_RS07110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AU29_RS07110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AU29_RS07115 PF01713 Smr domain AU29_RS07120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AU29_RS07120 PF02203 Tar ligand binding domain homologue AU29_RS07120 PF00672 HAMP domain AU29_RS07125 PF01544 CorA-like Mg2+ transporter protein AU29_RS07130 PF00271 Helicase conserved C-terminal domain AU29_RS07130 PF00270 DEAD/DEAH box helicase AU29_RS07130 PF03880 DbpA RNA binding domain AU29_RS07135 PF01171 PP-loop family AU29_RS07140 PF12167 Arm DNA-binding domain AU29_RS07140 PF00589 Phage integrase family AU29_RS07165 PF07151 Protein of unknown function (DUF1391) AU29_RS07195 PF01848 Hok/gef family AU29_RS07205 PF07102 Protein of unknown function (DUF1364) AU29_RS07230 PF12167 Arm DNA-binding domain AU29_RS07230 PF00589 Phage integrase family AU29_RS07240 PF00893 Small Multidrug Resistance protein AU29_RS07245 PF00582 Universal stress protein family AU29_RS07255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AU29_RS07255 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AU29_RS07255 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AU29_RS07255 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AU29_RS07255 PF10371 Domain of unknown function AU29_RS07265 PF03891 Domain of unknown function (DUF333) AU29_RS07270 PF03724 META domain AU29_RS07275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AU29_RS07275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AU29_RS07280 PF11739 Dicarboxylate transport AU29_RS07285 PF13617 YnbE-like lipoprotein AU29_RS07290 PF07027 Protein of unknown function (DUF1318) AU29_RS07300 PF02525 Flavodoxin-like fold AU29_RS07305 PF11898 Domain of unknown function (DUF3418) AU29_RS07305 PF00270 DEAD/DEAH box helicase AU29_RS07305 PF00271 Helicase conserved C-terminal domain AU29_RS07305 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AU29_RS07305 PF04408 Helicase associated domain (HA2) AU29_RS07310 PF02698 DUF218 domain AU29_RS07315 PF01292 Prokaryotic cytochrome b561 AU29_RS07320 PF08242 Methyltransferase domain AU29_RS07335 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS07340 PF00005 ABC transporter AU29_RS07345 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS07350 PF00497 Bacterial extracellular solute-binding proteins, family 3 AU29_RS07360 PF06767 Sif protein AU29_RS07360 PF00657 GDSL-like Lipase/Acylhydrolase AU29_RS07370 PF02583 Metal-sensitive transcriptional repressor AU29_RS07375 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS07375 PF00107 Zinc-binding dehydrogenase AU29_RS07380 PF02203 Tar ligand binding domain homologue AU29_RS07380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AU29_RS07380 PF00672 HAMP domain AU29_RS07385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS07385 PF03466 LysR substrate binding domain AU29_RS07390 PF07063 Domain of unknown function (DUF1338) AU29_RS07395 PF00135 Carboxylesterase family AU29_RS07400 PF04349 Periplasmic glucan biosynthesis protein, MdoG AU29_RS07405 PF04264 YceI-like domain AU29_RS07410 PF07729 FCD domain AU29_RS07410 PF00392 Bacterial regulatory proteins, gntR family AU29_RS07415 PF00107 Zinc-binding dehydrogenase AU29_RS07415 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS07420 PF07690 Major Facilitator Superfamily AU29_RS07425 PF00106 short chain dehydrogenase AU29_RS07430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AU29_RS07430 PF13378 Enolase C-terminal domain-like AU29_RS07435 PF00583 Acetyltransferase (GNAT) family AU29_RS07440 PF00455 DeoR C terminal sensor domain AU29_RS07440 PF08220 DeoR-like helix-turn-helix domain AU29_RS07445 PF00834 Ribulose-phosphate 3 epimerase family AU29_RS07450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AU29_RS07455 PF03437 BtpA family AU29_RS07460 PF03611 PTS system sugar-specific permease component AU29_RS07465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AU29_RS07470 PF05343 M42 glutamyl aminopeptidase AU29_RS07475 PF13302 Acetyltransferase (GNAT) domain AU29_RS07480 PF18836 Beta solenoid repeat from YDCK AU29_RS07485 PF03595 Voltage-dependent anion channel AU29_RS07490 PF03848 Tellurite resistance protein TehB AU29_RS07495 PF11769 Protein of unknown function (DUF3313) AU29_RS07500 PF03594 Benzoate membrane transport protein AU29_RS07505 PF01381 Helix-turn-helix AU29_RS07505 PF07883 Cupin domain AU29_RS07510 PF01136 Peptidase family U32 AU29_RS07510 PF12392 Collagenase AU29_RS07515 PF10829 Protein of unknown function (DUF2554) AU29_RS07520 PF06767 Sif protein AU29_RS07535 PF01427 D-ala-D-ala dipeptidase AU29_RS07540 PF00155 Aminotransferase class I and II AU29_RS07540 PF00392 Bacterial regulatory proteins, gntR family AU29_RS07545 PF00171 Aldehyde dehydrogenase family AU29_RS07550 PF10753 Toxin GhoT_OrtT AU29_RS07570 PF10735 Protein of unknown function (DUF2526) AU29_RS07575 PF04657 Putative inner membrane exporter, YdcZ AU29_RS07585 PF00107 Zinc-binding dehydrogenase AU29_RS07585 PF16884 N-terminal domain of oxidoreductase AU29_RS07590 PF00392 Bacterial regulatory proteins, gntR family AU29_RS07590 PF07729 FCD domain AU29_RS07595 PF07715 TonB-dependent Receptor Plug Domain AU29_RS07595 PF00593 TonB dependent receptor AU29_RS07605 PF06004 Bacterial protein of unknown function (DUF903) AU29_RS07610 PF00324 Amino acid permease AU29_RS07620 PF00797 N-acetyltransferase AU29_RS07625 PF02567 Phenazine biosynthesis-like protein AU29_RS07630 PF02665 Nitrate reductase gamma subunit AU29_RS07635 PF02613 Nitrate reductase delta subunit AU29_RS07640 PF13247 4Fe-4S dicluster domain AU29_RS07640 PF14711 Respiratory nitrate reductase beta C-terminal AU29_RS07645 PF00384 Molybdopterin oxidoreductase AU29_RS07645 PF01568 Molydopterin dinucleotide binding domain AU29_RS07645 PF14710 Respiratory nitrate reductase alpha N-terminal AU29_RS07650 PF07690 Major Facilitator Superfamily AU29_RS07660 PF07690 Major Facilitator Superfamily AU29_RS07670 PF00267 Gram-negative porin AU29_RS07675 PF00892 EamA-like transporter family AU29_RS07680 PF01568 Molydopterin dinucleotide binding domain AU29_RS07680 PF00384 Molybdopterin oxidoreductase AU29_RS07680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS07685 PF00384 Molybdopterin oxidoreductase AU29_RS07685 PF01568 Molydopterin dinucleotide binding domain AU29_RS07685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS07690 PF13247 4Fe-4S dicluster domain AU29_RS07690 PF09163 Formate dehydrogenase N, transmembrane AU29_RS07690 PF12800 4Fe-4S binding domain AU29_RS07695 PF01292 Prokaryotic cytochrome b561 AU29_RS07700 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS07700 PF00107 Zinc-binding dehydrogenase AU29_RS07705 PF03949 Malic enzyme, NAD binding domain AU29_RS07705 PF00390 Malic enzyme, N-terminal domain AU29_RS07710 PF08136 30S ribosomal protein subunit S22 family AU29_RS07715 PF10684 Putative biofilm-dependent modulation protein AU29_RS07720 PF02566 OsmC-like protein AU29_RS07725 PF06411 HdeA/HdeB family AU29_RS07735 PF00128 Alpha amylase, catalytic domain AU29_RS07735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AU29_RS07735 PF11941 Domain of unknown function (DUF3459) AU29_RS07740 PF00128 Alpha amylase, catalytic domain AU29_RS07745 PF00128 Alpha amylase, catalytic domain AU29_RS07745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AU29_RS07750 PF00155 Aminotransferase class I and II AU29_RS07755 PF03553 Na+/H+ antiporter family AU29_RS07760 PF00356 Bacterial regulatory proteins, lacI family AU29_RS07780 PF01042 Endoribonuclease L-PSP AU29_RS07785 PF02547 Queuosine biosynthesis protein AU29_RS07795 PF01494 FAD binding domain AU29_RS07800 PF07690 Major Facilitator Superfamily AU29_RS07810 PF07690 Major Facilitator Superfamily AU29_RS07815 PF00107 Zinc-binding dehydrogenase AU29_RS07815 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS07820 PF00392 Bacterial regulatory proteins, gntR family AU29_RS07820 PF07729 FCD domain AU29_RS07830 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AU29_RS07830 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AU29_RS07835 PF00374 Nickel-dependent hydrogenase AU29_RS07840 PF01292 Prokaryotic cytochrome b561 AU29_RS07845 PF01750 Hydrogenase maturation protease AU29_RS07850 PF01455 HupF/HypC family AU29_RS07860 PF04809 HupH hydrogenase expression protein, C-terminal conserved region AU29_RS07870 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AU29_RS07875 PF00267 Gram-negative porin AU29_RS07885 PF01062 Bestrophin, RFP-TM, chloride channel AU29_RS07890 PF13811 Domain of unknown function (DUF4186) AU29_RS07895 PF04960 Glutaminase AU29_RS07900 PF00171 Aldehyde dehydrogenase family AU29_RS07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS07905 PF03466 LysR substrate binding domain AU29_RS07910 PF07690 Major Facilitator Superfamily AU29_RS07915 PF01914 MarC family integral membrane protein AU29_RS07920 PF01047 MarR family AU29_RS07925 PF12833 Helix-turn-helix domain AU29_RS07930 PF13999 MarB protein AU29_RS07935 PF00892 EamA-like transporter family AU29_RS07940 PF07690 Major Facilitator Superfamily AU29_RS07950 PF04076 Bacterial OB fold (BOF) protein AU29_RS07955 PF02464 Competence-damaged protein AU29_RS07960 PF10685 Stress-induced bacterial acidophilic repeat motif AU29_RS07965 PF01432 Peptidase family M3 AU29_RS07970 PF00106 short chain dehydrogenase AU29_RS07975 PF07729 FCD domain AU29_RS07975 PF00392 Bacterial regulatory proteins, gntR family AU29_RS07980 PF14001 YdfZ protein AU29_RS07985 PF08125 Mannitol dehydrogenase C-terminal domain AU29_RS07985 PF01232 Mannitol dehydrogenase Rossmann domain AU29_RS07990 PF07690 Major Facilitator Superfamily AU29_RS07990 PF00083 Sugar (and other) transporter AU29_RS07995 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS07995 PF00107 Zinc-binding dehydrogenase AU29_RS08000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AU29_RS08000 PF13378 Enolase C-terminal domain-like AU29_RS08005 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AU29_RS08010 PF06932 Protein of unknown function (DUF1283) AU29_RS08015 PF13302 Acetyltransferase (GNAT) domain AU29_RS08020 PF06788 Uncharacterised protein family (UPF0257) AU29_RS08025 PF06649 Protein of unknown function (DUF1161) AU29_RS08030 PF01568 Molydopterin dinucleotide binding domain AU29_RS08030 PF00384 Molybdopterin oxidoreductase AU29_RS08030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS08035 PF01568 Molydopterin dinucleotide binding domain AU29_RS08035 PF00384 Molybdopterin oxidoreductase AU29_RS08035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS08040 PF12800 4Fe-4S binding domain AU29_RS08040 PF13247 4Fe-4S dicluster domain AU29_RS08045 PF04976 DMSO reductase anchor subunit (DmsC) AU29_RS08050 PF02613 Nitrate reductase delta subunit AU29_RS08055 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS08060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AU29_RS08065 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS08070 PF00571 CBS domain AU29_RS08070 PF00005 ABC transporter AU29_RS08075 PF00654 Voltage gated chloride channel AU29_RS08085 PF00480 ROK family AU29_RS08090 PF03466 LysR substrate binding domain AU29_RS08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS08095 PF07690 Major Facilitator Superfamily AU29_RS08105 PF00089 Trypsin AU29_RS08110 PF00893 Small Multidrug Resistance protein AU29_RS08115 PF00893 Small Multidrug Resistance protein AU29_RS08120 PF01594 AI-2E family transporter AU29_RS08125 PF02233 NAD(P) transhydrogenase beta subunit AU29_RS08130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AU29_RS08130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AU29_RS08130 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AU29_RS08135 PF07338 Protein of unknown function (DUF1471) AU29_RS08140 PF13520 Amino acid permease AU29_RS08145 PF06942 GlpM protein AU29_RS08150 PF00072 Response regulator receiver domain AU29_RS08150 PF00486 Transcriptional regulatory protein, C terminal AU29_RS08160 PF00267 Gram-negative porin AU29_RS08165 PF13382 Adenine deaminase C-terminal domain AU29_RS08165 PF01979 Amidohydrolase family AU29_RS08170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS08170 PF00672 HAMP domain AU29_RS08170 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS08175 PF05472 DNA replication terminus site-binding protein (Ter protein) AU29_RS08180 PF10415 Fumarase C C-terminus AU29_RS08180 PF00206 Lyase AU29_RS08185 PF05683 Fumarase C-terminus AU29_RS08185 PF05681 Fumarate hydratase (Fumerase) AU29_RS08190 PF01238 Phosphomannose isomerase type I AU29_RS08195 PF06097 Bacterial protein of unknown function (DUF945) AU29_RS08200 PF00367 phosphotransferase system, EIIB AU29_RS08200 PF02378 Phosphotransferase system, EIIC AU29_RS08205 PF00962 Adenosine/AMP deaminase AU29_RS08210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AU29_RS08210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AU29_RS08220 PF05321 Haemolysin expression modulating protein AU29_RS08225 PF10754 Protein of unknown function (DUF2569) AU29_RS08230 PF02508 Rnf-Nqr subunit, membrane protein AU29_RS08235 PF04060 Putative Fe-S cluster AU29_RS08240 PF10531 SLBB domain AU29_RS08240 PF13375 RnfC Barrel sandwich hybrid domain AU29_RS08240 PF12838 4Fe-4S dicluster domain AU29_RS08240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AU29_RS08245 PF03116 NQR2, RnfD, RnfE family AU29_RS08250 PF04205 FMN-binding domain AU29_RS08255 PF02508 Rnf-Nqr subunit, membrane protein AU29_RS08260 PF00633 Helix-hairpin-helix motif AU29_RS08260 PF00730 HhH-GPD superfamily base excision DNA repair protein AU29_RS08260 PF10576 Iron-sulfur binding domain of endonuclease III AU29_RS08265 PF00854 POT family AU29_RS08270 PF02798 Glutathione S-transferase, N-terminal domain AU29_RS08270 PF00043 Glutathione S-transferase, C-terminal domain AU29_RS08275 PF08543 Phosphomethylpyrimidine kinase AU29_RS08280 PF00579 tRNA synthetases class I (W and Y) AU29_RS08280 PF01479 S4 domain AU29_RS08285 PF01243 Pyridoxamine 5'-phosphate oxidase AU29_RS08285 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AU29_RS08290 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AU29_RS08295 PF03702 Anhydro-N-acetylmuramic acid kinase AU29_RS08300 PF05433 Glycine zipper 2TM domain AU29_RS08305 PF01047 MarR family AU29_RS08310 PF07869 Protein of unknown function (DUF1656) AU29_RS08315 PF00529 HlyD membrane-fusion protein of T1SS AU29_RS08315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AU29_RS08320 PF04632 Fusaric acid resistance protein family AU29_RS08325 PF00080 Copper/zinc superoxide dismutase (SODC) AU29_RS08330 PF00248 Aldo/keto reductase family AU29_RS08335 PF06945 Protein of unknown function (DUF1289) AU29_RS08340 PF00440 Bacterial regulatory proteins, tetR family AU29_RS08340 PF16925 Tetracyclin repressor-like, C-terminal domain AU29_RS08345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AU29_RS08350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AU29_RS08355 PF00929 Exonuclease AU29_RS08360 PF00462 Glutaredoxin AU29_RS08365 PF00877 NlpC/P60 family AU29_RS08370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AU29_RS08370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AU29_RS08375 PF00356 Bacterial regulatory proteins, lacI family AU29_RS08380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS08380 PF03466 LysR substrate binding domain AU29_RS08385 PF07690 Major Facilitator Superfamily AU29_RS08395 PF00677 Lumazine binding domain AU29_RS08400 PF01554 MatE AU29_RS08415 PF01312 FlhB HrpN YscU SpaS Family AU29_RS08420 PF01311 Bacterial export proteins, family 1 AU29_RS08425 PF01313 Bacterial export proteins, family 3 AU29_RS08430 PF00813 FliP family AU29_RS08435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AU29_RS08450 PF18269 T3SS EscN ATPase C-terminal domain AU29_RS08450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AU29_RS08455 PF00771 FHIPEP family AU29_RS08465 PF07201 HrpJ-like domain AU29_RS08480 PF01514 Secretory protein of YscJ/FliF family AU29_RS08520 PF05802 Enterobacterial EspB protein AU29_RS08525 PF04888 Secretion system effector C (SseC) like family AU29_RS08535 PF03433 EspA-like secreted protein AU29_RS08555 PF03958 Bacterial type II/III secretion system short domain AU29_RS08555 PF00263 Bacterial type II and III secretion system protein AU29_RS08565 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS08565 PF00672 HAMP domain AU29_RS08565 PF01627 Hpt domain AU29_RS08565 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AU29_RS08565 PF00072 Response regulator receiver domain AU29_RS08570 PF00072 Response regulator receiver domain AU29_RS08570 PF00196 Bacterial regulatory proteins, luxR family AU29_RS08575 PF13411 MerR HTH family regulatory protein AU29_RS08580 PF08349 Protein of unknown function (DUF1722) AU29_RS08585 PF10965 Protein of unknown function (DUF2767) AU29_RS08590 PF00196 Bacterial regulatory proteins, luxR family AU29_RS08590 PF00072 Response regulator receiver domain AU29_RS08595 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS08595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS08600 PF13247 4Fe-4S dicluster domain AU29_RS08605 PF03916 Polysulphide reductase, NrfD AU29_RS08610 PF01568 Molydopterin dinucleotide binding domain AU29_RS08610 PF00384 Molybdopterin oxidoreductase AU29_RS08610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS08615 PF00294 pfkB family carbohydrate kinase AU29_RS08625 PF00561 alpha/beta hydrolase fold AU29_RS08630 PF00324 Amino acid permease AU29_RS08635 PF00224 Pyruvate kinase, barrel domain AU29_RS08635 PF02887 Pyruvate kinase, alpha/beta domain AU29_RS08640 PF04728 Lipoprotein leucine-zipper AU29_RS08645 PF04728 Lipoprotein leucine-zipper AU29_RS08650 PF17969 L,D-transpeptidase C-terminal domain AU29_RS08650 PF01476 LysM domain AU29_RS08650 PF03734 L,D-transpeptidase catalytic domain AU29_RS08655 PF02657 Fe-S metabolism associated domain AU29_RS08660 PF00266 Aminotransferase class-V AU29_RS08665 PF01458 Uncharacterized protein family (UPF0051) AU29_RS08670 PF00005 ABC transporter AU29_RS08675 PF01458 Uncharacterized protein family (UPF0051) AU29_RS08680 PF01521 Iron-sulphur cluster biosynthesis AU29_RS08685 PF00375 Sodium:dicarboxylate symporter family AU29_RS08690 PF15930 Domain of unknown function AU29_RS08695 PF03061 Thioesterase superfamily AU29_RS08700 PF02913 FAD linked oxidases, C-terminal domain AU29_RS08700 PF01565 FAD binding domain AU29_RS08700 PF13183 4Fe-4S dicluster domain AU29_RS08705 PF01594 AI-2E family transporter AU29_RS08710 PF08965 Domain of unknown function (DUF1870) AU29_RS08715 PF07690 Major Facilitator Superfamily AU29_RS08720 PF07690 Major Facilitator Superfamily AU29_RS08725 PF08501 Shikimate dehydrogenase substrate binding domain AU29_RS08725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AU29_RS08730 PF01487 Type I 3-dehydroquinase AU29_RS08735 PF01144 Coenzyme A transferase AU29_RS08740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AU29_RS08740 PF02770 Acyl-CoA dehydrogenase, middle domain AU29_RS08740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AU29_RS08745 PF02311 AraC-like ligand binding domain AU29_RS08745 PF12833 Helix-turn-helix domain AU29_RS08750 PF01012 Electron transfer flavoprotein domain AU29_RS08760 PF01494 FAD binding domain AU29_RS08770 PF13193 AMP-binding enzyme C-terminal domain AU29_RS08770 PF00501 AMP-binding enzyme AU29_RS08775 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AU29_RS08775 PF02896 PEP-utilising enzyme, TIM barrel domain AU29_RS08775 PF00391 PEP-utilising enzyme, mobile domain AU29_RS08780 PF03618 Kinase/pyrophosphorylase AU29_RS08785 PF00793 DAHP synthetase I family AU29_RS08790 PF10636 Hemin uptake protein hemP AU29_RS08795 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AU29_RS08800 PF00563 EAL domain AU29_RS08805 PF00877 NlpC/P60 family AU29_RS08810 PF00005 ABC transporter AU29_RS08815 PF00255 Glutathione peroxidase AU29_RS08820 PF01032 FecCD transport family AU29_RS08825 PF00216 Bacterial DNA-binding protein AU29_RS08830 PF01588 Putative tRNA binding domain AU29_RS08830 PF03147 Ferredoxin-fold anticodon binding domain AU29_RS08830 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AU29_RS08830 PF03484 tRNA synthetase B5 domain AU29_RS08830 PF03483 B3/4 domain AU29_RS08835 PF01409 tRNA synthetases class II core domain (F) AU29_RS08835 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AU29_RS08840 PF00453 Ribosomal protein L20 AU29_RS08845 PF01632 Ribosomal protein L35 AU29_RS08850 PF05198 Translation initiation factor IF-3, N-terminal domain AU29_RS08850 PF00707 Translation initiation factor IF-3, C-terminal domain AU29_RS08855 PF03129 Anticodon binding domain AU29_RS08855 PF02824 TGS domain AU29_RS08855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AU29_RS08855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AU29_RS08870 PF01223 DNA/RNA non-specific endonuclease AU29_RS08885 PF04338 Protein of unknown function, DUF481 AU29_RS08890 PF00294 pfkB family carbohydrate kinase AU29_RS08895 PF11080 Endoribonuclease GhoS AU29_RS08900 PF03881 Fructosamine kinase AU29_RS08905 PF14002 YniB-like protein AU29_RS08910 PF13419 Haloacid dehalogenase-like hydrolase AU29_RS08915 PF04307 LexA-binding, inner membrane-associated putative hydrolase AU29_RS08920 PF00375 Sodium:dicarboxylate symporter family AU29_RS08925 PF10729 Cell division activator CedA AU29_RS08930 PF06628 Catalase-related immune-responsive AU29_RS08930 PF18011 C-terminal domain found in long catalases AU29_RS08930 PF00199 Catalase AU29_RS08935 PF04794 YdjC-like protein AU29_RS08940 PF11975 Family 4 glycosyl hydrolase C-terminal domain AU29_RS08940 PF02056 Family 4 glycosyl hydrolase AU29_RS08945 PF07883 Cupin domain AU29_RS08945 PF12833 Helix-turn-helix domain AU29_RS08950 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AU29_RS08955 PF02378 Phosphotransferase system, EIIC AU29_RS08960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AU29_RS08965 PF04355 SmpA / OmlA family AU29_RS08970 PF02540 NAD synthase AU29_RS08980 PF07813 LTXXQ motif family protein AU29_RS08985 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AU29_RS08990 PF04996 Succinylarginine dihydrolase AU29_RS08995 PF00171 Aldehyde dehydrogenase family AU29_RS09000 PF04958 Arginine N-succinyltransferase beta subunit AU29_RS09005 PF00202 Aminotransferase class-III AU29_RS09010 PF03372 Endonuclease/Exonuclease/phosphatase family AU29_RS09015 PF00293 NUDIX domain AU29_RS09020 PF07383 Protein of unknown function (DUF1496) AU29_RS09025 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AU29_RS09025 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AU29_RS09030 PF01131 DNA topoisomerase AU29_RS09030 PF01751 Toprim domain AU29_RS09035 PF02769 AIR synthase related protein, C-terminal domain AU29_RS09035 PF00586 AIR synthase related protein, N-terminal domain AU29_RS09040 PF00881 Nitroreductase family AU29_RS09045 PF01343 Peptidase family S49 AU29_RS09050 PF00710 Asparaginase, N-terminal AU29_RS09050 PF17763 Glutaminase/Asparaginase C-terminal domain AU29_RS09055 PF00857 Isochorismatase family AU29_RS09060 PF00083 Sugar (and other) transporter AU29_RS09065 PF08220 DeoR-like helix-turn-helix domain AU29_RS09065 PF00455 DeoR C terminal sensor domain AU29_RS09070 PF00248 Aldo/keto reductase family AU29_RS09075 PF00294 pfkB family carbohydrate kinase AU29_RS09080 PF01116 Fructose-bisphosphate aldolase class-II AU29_RS09085 PF00107 Zinc-binding dehydrogenase AU29_RS09085 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS09090 PF00083 Sugar (and other) transporter AU29_RS09095 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS09095 PF00107 Zinc-binding dehydrogenase AU29_RS09100 PF07023 Protein of unknown function (DUF1315) AU29_RS09105 PF01641 SelR domain AU29_RS09110 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AU29_RS09110 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AU29_RS09115 PF01263 Aldose 1-epimerase AU29_RS09120 PF00248 Aldo/keto reductase family AU29_RS09125 PF13186 Iron-sulfur cluster-binding domain AU29_RS09125 PF04055 Radical SAM superfamily AU29_RS09130 PF06629 MltA-interacting protein MipA AU29_RS09135 PF06798 PrkA serine protein kinase C-terminal domain AU29_RS09135 PF08298 PrkA AAA domain AU29_RS09140 PF04285 Protein of unknown function (DUF444) AU29_RS09145 PF17155 Gammaproteobacterial periplasmic sensor domain AU29_RS09145 PF00990 Diguanylate cyclase, GGDEF domain AU29_RS09150 PF04073 Aminoacyl-tRNA editing domain AU29_RS09160 PF04284 Protein of unknown function (DUF441) AU29_RS09165 PF02311 AraC-like ligand binding domain AU29_RS09165 PF12833 Helix-turn-helix domain AU29_RS09170 PF07690 Major Facilitator Superfamily AU29_RS09175 PF04343 Protein of unknown function, DUF488 AU29_RS09185 PF03891 Domain of unknown function (DUF333) AU29_RS09190 PF04226 Transglycosylase associated protein AU29_RS09205 PF08956 Domain of unknown function (DUF1869) AU29_RS09210 PF09313 Domain of unknown function (DUF1971) AU29_RS09215 PF01810 LysE type translocator AU29_RS09220 PF01817 Chorismate mutase type II AU29_RS09230 PF00376 MerR family regulatory protein AU29_RS09230 PF09278 MerR, DNA binding AU29_RS09240 PF13427 Domain of unknown function (DUF4111) AU29_RS09240 PF01909 Nucleotidyltransferase domain AU29_RS09245 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AU29_RS09260 PF00924 Mechanosensitive ion channel AU29_RS09265 PF00005 ABC transporter AU29_RS09270 PF00005 ABC transporter AU29_RS09275 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS09275 PF12911 N-terminal TM domain of oligopeptide transport permease C AU29_RS09280 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS09285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AU29_RS09295 PF01292 Prokaryotic cytochrome b561 AU29_RS09310 PF00011 Hsp20/alpha crystallin family AU29_RS09350 PF06316 Enterobacterial Ail/Lom protein AU29_RS09370 PF00313 'Cold-shock' DNA-binding domain AU29_RS09375 PF00652 Ricin-type beta-trefoil lectin domain AU29_RS09380 PF06183 DinI-like family AU29_RS09400 PF00180 Isocitrate/isopropylmalate dehydrogenase AU29_RS09405 PF00849 RNA pseudouridylate synthase AU29_RS09415 PF00293 NUDIX domain AU29_RS09425 PF04356 Protein of unknown function (DUF489) AU29_RS09430 PF00206 Lyase AU29_RS09430 PF08328 Adenylosuccinate lyase C-terminal AU29_RS09435 PF00486 Transcriptional regulatory protein, C terminal AU29_RS09435 PF00072 Response regulator receiver domain AU29_RS09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS09440 PF08918 PhoQ Sensor AU29_RS09445 PF08007 Cupin superfamily protein AU29_RS09455 PF07687 Peptidase dimerisation domain AU29_RS09455 PF01546 Peptidase family M20/M25/M40 AU29_RS09460 PF00005 ABC transporter AU29_RS09460 PF08402 TOBE domain AU29_RS09465 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS09470 PF06767 Sif protein AU29_RS09475 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS09480 PF13416 Bacterial extracellular solute-binding protein AU29_RS09485 PF02146 Sir2 family AU29_RS09490 PF00480 ROK family AU29_RS09495 PF02687 FtsX-like permease family AU29_RS09495 PF12704 MacB-like periplasmic core domain AU29_RS09500 PF00005 ABC transporter AU29_RS09505 PF12704 MacB-like periplasmic core domain AU29_RS09505 PF02687 FtsX-like permease family AU29_RS09510 PF00270 DEAD/DEAH box helicase AU29_RS09510 PF02559 CarD-like/TRCF domain AU29_RS09510 PF00271 Helicase conserved C-terminal domain AU29_RS09510 PF17757 UvrB interaction domain AU29_RS09510 PF03461 TRCF domain AU29_RS09515 PF01476 LysM domain AU29_RS09515 PF03734 L,D-transpeptidase catalytic domain AU29_RS09515 PF17969 L,D-transpeptidase C-terminal domain AU29_RS09520 PF07338 Protein of unknown function (DUF1471) AU29_RS09525 PF00440 Bacterial regulatory proteins, tetR family AU29_RS09530 PF05433 Glycine zipper 2TM domain AU29_RS09535 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS09540 PF05728 Uncharacterised protein family (UPF0227) AU29_RS09545 PF00933 Glycosyl hydrolase family 3 N terminal domain AU29_RS09550 PF01636 Phosphotransferase enzyme family AU29_RS09555 PF13036 Peptidoglycan-synthase activator LpoB AU29_RS09560 PF07233 Protein of unknown function (DUF1425) AU29_RS09565 PF01230 HIT domain AU29_RS09570 PF00593 TonB dependent receptor AU29_RS09570 PF07715 TonB-dependent Receptor Plug Domain AU29_RS09575 PF02378 Phosphotransferase system, EIIC AU29_RS09575 PF00367 phosphotransferase system, EIIB AU29_RS09580 PF01026 TatD related DNase AU29_RS09585 PF09115 DNA polymerase III, delta subunit, C terminal AU29_RS09590 PF02223 Thymidylate kinase AU29_RS09595 PF02618 YceG-like family AU29_RS09600 PF01063 Amino-transferase class IV AU29_RS09605 PF00109 Beta-ketoacyl synthase, N-terminal domain AU29_RS09605 PF02801 Beta-ketoacyl synthase, C-terminal domain AU29_RS09610 PF00550 Phosphopantetheine attachment site AU29_RS09620 PF00698 Acyl transferase domain AU29_RS09625 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AU29_RS09625 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AU29_RS09630 PF02504 Fatty acid synthesis protein AU29_RS09635 PF01783 Ribosomal L32p protein family AU29_RS09640 PF02620 Large ribosomal RNA subunit accumulation protein YceD AU29_RS09645 PF02545 Maf-like protein AU29_RS09660 PF00849 RNA pseudouridylate synthase AU29_RS09660 PF01479 S4 domain AU29_RS09670 PF12111 Polyribonucleotide phosphorylase C terminal AU29_RS09670 PF10150 Ribonuclease E/G family AU29_RS09670 PF00575 S1 RNA binding domain AU29_RS09675 PF00669 Bacterial flagellin N-terminal helical region AU29_RS09680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AU29_RS09680 PF00460 Flagella basal body rod protein AU29_RS09685 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AU29_RS09685 PF10135 Rod binding protein AU29_RS09690 PF02119 Flagellar P-ring protein AU29_RS09695 PF02107 Flagellar L-ring protein AU29_RS09700 PF00460 Flagella basal body rod protein AU29_RS09700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AU29_RS09705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AU29_RS09705 PF00460 Flagella basal body rod protein AU29_RS09710 PF00460 Flagella basal body rod protein AU29_RS09710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AU29_RS09710 PF07559 Flagellar basal body protein FlaE AU29_RS09715 PF13860 FlgD Ig-like domain AU29_RS09715 PF03963 Flagellar hook capping protein - N-terminal region AU29_RS09715 PF13861 FlgD Tudor-like domain AU29_RS09720 PF00460 Flagella basal body rod protein AU29_RS09720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AU29_RS09725 PF00460 Flagella basal body rod protein AU29_RS09730 PF13144 Chaperone for flagella basal body P-ring formation AU29_RS09735 PF04316 Anti-sigma-28 factor, FlgM AU29_RS09740 PF05130 FlgN protein AU29_RS09745 PF03023 Lipid II flippase MurJ AU29_RS09750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AU29_RS09755 PF04337 Protein of unknown function, DUF480 AU29_RS09760 PF13302 Acetyltransferase (GNAT) domain AU29_RS09765 PF07690 Major Facilitator Superfamily AU29_RS09770 PF04399 Glutaredoxin 2, C terminal domain AU29_RS09770 PF13417 Glutathione S-transferase, N-terminal domain AU29_RS09775 PF07273 Protein of unknown function (DUF1439) AU29_RS09780 PF01979 Amidohydrolase family AU29_RS09785 PF06183 DinI-like family AU29_RS09790 PF13991 BssS protein family AU29_RS09795 PF01266 FAD dependent oxidoreductase AU29_RS09800 PF10968 Protein of unknown function (DUF2770) AU29_RS09805 PF01292 Prokaryotic cytochrome b561 AU29_RS09810 PF04264 YceI-like domain AU29_RS09815 PF12368 Rhodanase C-terminal AU29_RS09815 PF00581 Rhodanese-like domain AU29_RS09815 PF17773 UPF0176 acylphosphatase like domain AU29_RS09820 PF03279 Bacterial lipid A biosynthesis acyltransferase AU29_RS09825 PF07690 Major Facilitator Superfamily AU29_RS09830 PF13984 MsyB protein AU29_RS09835 PF07119 Protein of unknown function (DUF1375) AU29_RS09840 PF00535 Glycosyl transferase family 2 AU29_RS09845 PF04349 Periplasmic glucan biosynthesis protein, MdoG AU29_RS09850 PF01757 Acyltransferase family AU29_RS09855 PF13091 PLD-like domain AU29_RS09860 PF01661 Macro domain AU29_RS09870 PF10610 Thin aggregative fimbriae synthesis protein AU29_RS09875 PF07012 Curlin associated repeat AU29_RS09880 PF07012 Curlin associated repeat AU29_RS09885 PF00196 Bacterial regulatory proteins, luxR family AU29_RS09890 PF10627 Curli assembly protein CsgE AU29_RS09895 PF10614 Type VIII secretion system (T8SS), CsgF protein AU29_RS09900 PF03783 Curli production assembly/transport component CsgG AU29_RS09905 PF06496 Protein of unknown function (DUF1097) AU29_RS09910 PF02613 Nitrate reductase delta subunit AU29_RS09915 PF02811 PHP domain AU29_RS09920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AU29_RS09935 PF01527 Transposase AU29_RS09940 PF02371 Transposase IS116/IS110/IS902 family AU29_RS09940 PF01548 Transposase AU29_RS09945 PF01527 Transposase AU29_RS09960 PF06167 Glucose-regulated metallo-peptidase M90 AU29_RS09970 PF13356 Arm DNA-binding domain AU29_RS09970 PF00589 Phage integrase family AU29_RS09985 PF00589 Phage integrase family AU29_RS09985 PF13356 Arm DNA-binding domain AU29_RS10005 PF13676 TIR domain AU29_RS10010 PF07484 Phage Tail Collar Domain AU29_RS10090 PF00816 H-NS histone family AU29_RS10150 PF01048 Phosphorylase superfamily AU29_RS10150 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AU29_RS10180 PF01554 MatE AU29_RS10195 PF03734 L,D-transpeptidase catalytic domain AU29_RS10195 PF17969 L,D-transpeptidase C-terminal domain AU29_RS10200 PF02277 Phosphoribosyltransferase AU29_RS10205 PF02654 Cobalamin-5-phosphate synthase AU29_RS10210 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AU29_RS10215 PF07685 CobB/CobQ-like glutamine amidotransferase domain AU29_RS10220 PF00005 ABC transporter AU29_RS10225 PF02361 Cobalt transport protein AU29_RS10230 PF02553 Cobalt transport protein component CbiN AU29_RS10235 PF01891 Cobalt uptake substrate-specific transmembrane region AU29_RS10240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AU29_RS10245 PF06180 Cobalt chelatase (CbiK) AU29_RS10250 PF02571 Precorrin-6x reductase CbiJ/CobK AU29_RS10255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AU29_RS10260 PF11761 Cobalamin biosynthesis central region AU29_RS10260 PF11760 Cobalamin synthesis G N-terminal AU29_RS10260 PF01890 Cobalamin synthesis G C-terminus AU29_RS10265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AU29_RS10270 PF05175 Methyltransferase small domain AU29_RS10275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AU29_RS10280 PF01888 CbiD AU29_RS10285 PF02570 Precorrin-8X methylmutase AU29_RS10290 PF03186 CobD/Cbib protein AU29_RS10295 PF07685 CobB/CobQ-like glutamine amidotransferase domain AU29_RS10295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AU29_RS10300 PF10114 Sensory domain found in PocR AU29_RS10300 PF12833 Helix-turn-helix domain AU29_RS10305 PF00230 Major intrinsic protein AU29_RS10310 PF00936 BMC domain AU29_RS10315 PF00936 BMC domain AU29_RS10320 PF02286 Dehydratase large subunit AU29_RS10325 PF02288 Dehydratase medium subunit AU29_RS10330 PF02287 Dehydratase small subunit AU29_RS10335 PF08841 Diol dehydratase reactivase ATPase-like domain AU29_RS10335 PF18427 DD-reactivating factor swiveling domain AU29_RS10345 PF00936 BMC domain AU29_RS10350 PF00936 BMC domain AU29_RS10355 PF06130 Phosphate propanoyltransferase AU29_RS10365 PF03319 Ethanolamine utilisation protein EutN/carboxysome AU29_RS10370 PF01923 Cobalamin adenosyltransferase AU29_RS10375 PF00171 Aldehyde dehydrogenase family AU29_RS10380 PF00465 Iron-containing alcohol dehydrogenase AU29_RS10380 PF00171 Aldehyde dehydrogenase family AU29_RS10385 PF10531 SLBB domain AU29_RS10385 PF13375 RnfC Barrel sandwich hybrid domain AU29_RS10385 PF13237 4Fe-4S dicluster domain AU29_RS10385 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AU29_RS10395 PF00936 BMC domain AU29_RS10400 PF10662 Ethanolamine utilisation - propanediol utilisation AU29_RS10405 PF00871 Acetokinase family AU29_RS10410 PF00288 GHMP kinases N terminal domain AU29_RS10415 PF04363 Protein of unknown function (DUF496) AU29_RS10420 PF04632 Fusaric acid resistance protein family AU29_RS10425 PF06445 GyrI-like small molecule binding domain AU29_RS10430 PF00768 D-alanyl-D-alanine carboxypeptidase AU29_RS10430 PF07943 Penicillin-binding protein 5, C-terminal domain AU29_RS10435 PF01292 Prokaryotic cytochrome b561 AU29_RS10440 PF13247 4Fe-4S dicluster domain AU29_RS10440 PF12800 4Fe-4S binding domain AU29_RS10445 PF01568 Molydopterin dinucleotide binding domain AU29_RS10445 PF00384 Molybdopterin oxidoreductase AU29_RS10445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS10450 PF13979 SopA-like catalytic domain AU29_RS10450 PF13981 SopA-like central domain AU29_RS10455 PF00929 Exonuclease AU29_RS10455 PF08411 Exonuclease C-terminal AU29_RS10460 PF13520 Amino acid permease AU29_RS10465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS10465 PF03466 LysR substrate binding domain AU29_RS10470 PF01370 NAD dependent epimerase/dehydratase family AU29_RS10475 PF01634 ATP phosphoribosyltransferase AU29_RS10475 PF08029 HisG, C-terminal domain AU29_RS10480 PF00815 Histidinol dehydrogenase AU29_RS10485 PF00155 Aminotransferase class I and II AU29_RS10490 PF00475 Imidazoleglycerol-phosphate dehydratase AU29_RS10495 PF00117 Glutamine amidotransferase class-I AU29_RS10500 PF00977 Histidine biosynthesis protein AU29_RS10505 PF00977 Histidine biosynthesis protein AU29_RS10510 PF01502 Phosphoribosyl-AMP cyclohydrolase AU29_RS10510 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AU29_RS10515 PF02706 Chain length determinant protein AU29_RS10520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AU29_RS10520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AU29_RS10525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AU29_RS10525 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AU29_RS10530 PF02397 Bacterial sugar transferase AU29_RS10535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AU29_RS10535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AU29_RS10535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AU29_RS10535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AU29_RS10540 PF00483 Nucleotidyl transferase AU29_RS10540 PF01050 Mannose-6-phosphate isomerase AU29_RS10545 PF00535 Glycosyl transferase family 2 AU29_RS10550 PF00534 Glycosyl transferases group 1 AU29_RS10550 PF13439 Glycosyltransferase Family 4 AU29_RS10555 PF00535 Glycosyl transferase family 2 AU29_RS10565 PF16363 GDP-mannose 4,6 dehydratase AU29_RS10570 PF01370 NAD dependent epimerase/dehydratase family AU29_RS10575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AU29_RS10580 PF16363 GDP-mannose 4,6 dehydratase AU29_RS10585 PF00483 Nucleotidyl transferase AU29_RS10590 PF00175 Oxidoreductase NAD-binding domain AU29_RS10590 PF00111 2Fe-2S iron-sulfur cluster binding domain AU29_RS10590 PF00970 Oxidoreductase FAD-binding domain AU29_RS10595 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AU29_RS10600 PF00483 Nucleotidyl transferase AU29_RS10605 PF04321 RmlD substrate binding domain AU29_RS10610 PF16363 GDP-mannose 4,6 dehydratase AU29_RS10615 PF00483 Nucleotidyl transferase AU29_RS10625 PF13439 Glycosyltransferase Family 4 AU29_RS10625 PF00534 Glycosyl transferases group 1 AU29_RS10630 PF04230 Polysaccharide pyruvyl transferase AU29_RS10640 PF02397 Bacterial sugar transferase AU29_RS10645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AU29_RS10645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AU29_RS10645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AU29_RS10645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AU29_RS10650 PF01050 Mannose-6-phosphate isomerase AU29_RS10650 PF00483 Nucleotidyl transferase AU29_RS10655 PF13579 Glycosyl transferase 4-like domain AU29_RS10655 PF00534 Glycosyl transferases group 1 AU29_RS10660 PF00293 NUDIX domain AU29_RS10665 PF01370 NAD dependent epimerase/dehydratase family AU29_RS10670 PF16363 GDP-mannose 4,6 dehydratase AU29_RS10675 PF00132 Bacterial transferase hexapeptide (six repeats) AU29_RS10680 PF00535 Glycosyl transferase family 2 AU29_RS10690 PF13439 Glycosyltransferase Family 4 AU29_RS10690 PF00534 Glycosyl transferases group 1 AU29_RS10695 PF00132 Bacterial transferase hexapeptide (six repeats) AU29_RS10700 PF00535 Glycosyl transferase family 2 AU29_RS10705 PF13807 G-rich domain on putative tyrosine kinase AU29_RS10705 PF13614 AAA domain AU29_RS10705 PF02706 Chain length determinant protein AU29_RS10710 PF01451 Low molecular weight phosphotyrosine protein phosphatase AU29_RS10715 PF10531 SLBB domain AU29_RS10715 PF02563 Polysaccharide biosynthesis/export protein AU29_RS10715 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AU29_RS10720 PF00571 CBS domain AU29_RS10720 PF03471 Transporter associated domain AU29_RS10720 PF03741 Integral membrane protein TerC family AU29_RS10725 PF05170 AsmA family AU29_RS10730 PF00692 dUTPase AU29_RS10735 PF00485 Phosphoribulokinase / Uridine kinase family AU29_RS10740 PF08448 PAS fold AU29_RS10740 PF05231 MASE1 AU29_RS10740 PF00990 Diguanylate cyclase, GGDEF domain AU29_RS10740 PF00563 EAL domain AU29_RS10740 PF13426 PAS domain AU29_RS10740 PF08447 PAS fold AU29_RS10745 PF06029 AlkA N-terminal domain AU29_RS10745 PF00730 HhH-GPD superfamily base excision DNA repair protein AU29_RS10750 PF00012 Hsp70 protein AU29_RS10755 PF13533 Biotin-lipoyl like AU29_RS10760 PF00873 AcrB/AcrD/AcrF family AU29_RS10765 PF00873 AcrB/AcrD/AcrF family AU29_RS10770 PF07690 Major Facilitator Superfamily AU29_RS10775 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS10775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS10775 PF00672 HAMP domain AU29_RS10780 PF00486 Transcriptional regulatory protein, C terminal AU29_RS10780 PF00072 Response regulator receiver domain AU29_RS10800 PF16325 Peptidase family U32 C-terminal domain AU29_RS10800 PF01136 Peptidase family U32 AU29_RS10805 PF05932 Tir chaperone protein (CesT) family AU29_RS10820 PF00781 Diacylglycerol kinase catalytic domain AU29_RS10825 PF01791 DeoC/LacD family aldolase AU29_RS10830 PF03825 Nucleoside H+ symporter AU29_RS10835 PF03747 ADP-ribosylglycohydrolase AU29_RS10840 PF00294 pfkB family carbohydrate kinase AU29_RS10845 PF00392 Bacterial regulatory proteins, gntR family AU29_RS10845 PF07702 UTRA domain AU29_RS10850 PF08543 Phosphomethylpyrimidine kinase AU29_RS10855 PF02110 Hydroxyethylthiazole kinase family AU29_RS10860 PF11776 Nickel/cobalt transporter regulator AU29_RS10870 PF13954 PapC N-terminal domain AU29_RS10870 PF13953 PapC C-terminal domain AU29_RS10870 PF00577 Outer membrane usher protein AU29_RS10875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS10875 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS10890 PF10609 NUBPL iron-transfer P-loop NTPase AU29_RS10895 PF09334 tRNA synthetases class I (M) AU29_RS10895 PF01588 Putative tRNA binding domain AU29_RS10900 PF06998 Protein of unknown function (DUF1307) AU29_RS10910 PF07308 Protein of unknown function (DUF1456) AU29_RS10915 PF00072 Response regulator receiver domain AU29_RS10915 PF04397 LytTr DNA-binding domain AU29_RS10920 PF07694 5TMR of 5TMR-LYT AU29_RS10920 PF06580 Histidine kinase AU29_RS10925 PF13411 MerR HTH family regulatory protein AU29_RS10935 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS10940 PF00005 ABC transporter AU29_RS10945 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS10950 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AU29_RS10955 PF14310 Fibronectin type III-like domain AU29_RS10955 PF00933 Glycosyl hydrolase family 3 N terminal domain AU29_RS10955 PF01915 Glycosyl hydrolase family 3 C-terminal domain AU29_RS10960 PF01565 FAD binding domain AU29_RS10960 PF09330 D-lactate dehydrogenase, membrane binding AU29_RS10965 PF00768 D-alanyl-D-alanine carboxypeptidase AU29_RS10970 PF04893 Yip1 domain AU29_RS10975 PF09335 SNARE associated Golgi protein AU29_RS10985 PF02321 Outer membrane efflux protein AU29_RS10990 PF01207 Dihydrouridine synthase (Dus) AU29_RS10995 PF01494 FAD binding domain AU29_RS11000 PF14497 Glutathione S-transferase, C-terminal domain AU29_RS11000 PF02798 Glutathione S-transferase, N-terminal domain AU29_RS11005 PF01557 Fumarylacetoacetate (FAA) hydrolase family AU29_RS11010 PF07883 Cupin domain AU29_RS11015 PF07690 Major Facilitator Superfamily AU29_RS11020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS11020 PF03466 LysR substrate binding domain AU29_RS11025 PF03788 LrgA family AU29_RS11030 PF04172 LrgB-like family AU29_RS11035 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AU29_RS11035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AU29_RS11040 PF02698 DUF218 domain AU29_RS11045 PF10808 Protein of unknown function (DUF2542) AU29_RS11050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS11050 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AU29_RS11055 PF01180 Dihydroorotate dehydrogenase AU29_RS11060 PF02653 Branched-chain amino acid transport system / permease component AU29_RS11065 PF00005 ABC transporter AU29_RS11070 PF13407 Periplasmic binding protein domain AU29_RS11075 PF00356 Bacterial regulatory proteins, lacI family AU29_RS11080 PF04235 Protein of unknown function (DUF418) AU29_RS11085 PF01227 GTP cyclohydrolase I AU29_RS11090 PF00756 Putative esterase AU29_RS11100 PF03315 Serine dehydratase beta chain AU29_RS11100 PF03313 Serine dehydratase alpha chain AU29_RS11105 PF18429 Domain of unknown function (DUF5609) AU29_RS11110 PF07690 Major Facilitator Superfamily AU29_RS11115 PF07715 TonB-dependent Receptor Plug Domain AU29_RS11115 PF00593 TonB dependent receptor AU29_RS11120 PF00324 Amino acid permease AU29_RS11125 PF03466 LysR substrate binding domain AU29_RS11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS11130 PF03601 Conserved hypothetical protein 698 AU29_RS11135 PF01261 Xylose isomerase-like TIM barrel AU29_RS11140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AU29_RS11140 PF02378 Phosphotransferase system, EIIC AU29_RS11145 PF00294 pfkB family carbohydrate kinase AU29_RS11150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AU29_RS11150 PF00381 PTS HPr component phosphorylation site AU29_RS11155 PF07690 Major Facilitator Superfamily AU29_RS11170 PF03692 Putative zinc- or iron-chelating domain AU29_RS11175 PF09285 Elongation factor P, C-terminal AU29_RS11175 PF08207 Elongation factor P (EF-P) KOW-like domain AU29_RS11175 PF01132 Elongation factor P (EF-P) OB domain AU29_RS11180 PF02492 CobW/HypB/UreG, nucleotide-binding domain AU29_RS11180 PF07683 Cobalamin synthesis protein cobW C-terminal domain AU29_RS11185 PF01569 PAP2 superfamily AU29_RS11190 PF00877 NlpC/P60 family AU29_RS11195 PF00563 EAL domain AU29_RS11195 PF12792 CSS motif domain associated with EAL AU29_RS11200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AU29_RS11205 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS11210 PF12911 N-terminal TM domain of oligopeptide transport permease C AU29_RS11210 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS11215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AU29_RS11215 PF00005 ABC transporter AU29_RS11220 PF13989 YejG-like protein AU29_RS11230 PF07690 Major Facilitator Superfamily AU29_RS11235 PF01479 S4 domain AU29_RS11235 PF00849 RNA pseudouridylate synthase AU29_RS11240 PF04851 Type III restriction enzyme, res subunit AU29_RS11240 PF00271 Helicase conserved C-terminal domain AU29_RS11245 PF01386 Ribosomal L25p family AU29_RS11255 PF04245 37-kD nucleoid-associated bacterial protein AU29_RS11260 PF07208 Protein of unknown function (DUF1414) AU29_RS11265 PF00884 Sulfatase AU29_RS11265 PF11893 Domain of unknown function (DUF3413) AU29_RS11275 PF12468 Type III secretion system leucine rich repeat protein AU29_RS11275 PF14496 C-terminal novel E3 ligase, LRR-interacting AU29_RS11305 PF00072 Response regulator receiver domain AU29_RS11305 PF00196 Bacterial regulatory proteins, luxR family AU29_RS11310 PF03918 Cytochrome C biogenesis protein AU29_RS11315 PF08534 Redoxin AU29_RS11320 PF01578 Cytochrome C assembly protein AU29_RS11320 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AU29_RS11325 PF03100 CcmE AU29_RS11330 PF04995 Heme exporter protein D (CcmD) AU29_RS11335 PF01578 Cytochrome C assembly protein AU29_RS11340 PF03379 CcmB protein AU29_RS11345 PF00005 ABC transporter AU29_RS11350 PF03264 NapC/NirT cytochrome c family, N-terminal region AU29_RS11355 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AU29_RS11360 PF13237 4Fe-4S dicluster domain AU29_RS11360 PF12801 4Fe-4S binding domain AU29_RS11365 PF12800 4Fe-4S binding domain AU29_RS11365 PF12838 4Fe-4S dicluster domain AU29_RS11370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS11370 PF01568 Molydopterin dinucleotide binding domain AU29_RS11370 PF00384 Molybdopterin oxidoreductase AU29_RS11375 PF03927 NapD protein AU29_RS11380 PF00037 4Fe-4S binding domain AU29_RS11380 PF12800 4Fe-4S binding domain AU29_RS11380 PF13187 4Fe-4S dicluster domain AU29_RS11385 PF03974 Ecotin AU29_RS11390 PF00005 ABC transporter AU29_RS11395 PF13532 2OG-Fe(II) oxygenase superfamily AU29_RS11400 PF12833 Helix-turn-helix domain AU29_RS11400 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AU29_RS11400 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AU29_RS11400 PF02805 Metal binding domain of Ada AU29_RS11405 PF02424 ApbE family AU29_RS11410 PF00267 Gram-negative porin AU29_RS11415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS11415 PF01627 Hpt domain AU29_RS11415 PF16359 RcsD-ABL domain AU29_RS11420 PF00072 Response regulator receiver domain AU29_RS11420 PF00196 Bacterial regulatory proteins, luxR family AU29_RS11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS11425 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS11425 PF09456 RcsC Alpha-Beta-Loop (ABL) AU29_RS11425 PF00072 Response regulator receiver domain AU29_RS11430 PF00521 DNA gyrase/topoisomerase IV, subunit A AU29_RS11430 PF03989 DNA gyrase C-terminal domain, beta-propeller AU29_RS11435 PF13378 Enolase C-terminal domain-like AU29_RS11435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AU29_RS11440 PF07690 Major Facilitator Superfamily AU29_RS11455 PF00317 Ribonucleotide reductase, all-alpha domain AU29_RS11455 PF03477 ATP cone domain AU29_RS11455 PF02867 Ribonucleotide reductase, barrel domain AU29_RS11460 PF00268 Ribonucleotide reductase, small chain AU29_RS11465 PF00111 2Fe-2S iron-sulfur cluster binding domain AU29_RS11470 PF07690 Major Facilitator Superfamily AU29_RS11475 PF03466 LysR substrate binding domain AU29_RS11475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS11480 PF03009 Glycerophosphoryl diester phosphodiesterase family AU29_RS11485 PF07690 Major Facilitator Superfamily AU29_RS11490 PF01266 FAD dependent oxidoreductase AU29_RS11490 PF04324 BFD-like [2Fe-2S] binding domain AU29_RS11495 PF00890 FAD binding domain AU29_RS11500 PF13183 4Fe-4S dicluster domain AU29_RS11500 PF02754 Cysteine-rich domain AU29_RS11515 PF03328 HpcH/HpaI aldolase/citrate lyase family AU29_RS11520 PF07690 Major Facilitator Superfamily AU29_RS11525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AU29_RS11525 PF13378 Enolase C-terminal domain-like AU29_RS11530 PF01614 Bacterial transcriptional regulator AU29_RS11530 PF09339 IclR helix-turn-helix domain AU29_RS11535 PF00994 Probable molybdopterin binding domain AU29_RS11540 PF07437 YfaZ precursor AU29_RS11545 PF00293 NUDIX domain AU29_RS11550 PF00300 Histidine phosphatase superfamily (branch 1) AU29_RS11555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AU29_RS11560 PF00535 Glycosyl transferase family 2 AU29_RS11565 PF01370 NAD dependent epimerase/dehydratase family AU29_RS11565 PF02911 Formyl transferase, C-terminal domain AU29_RS11565 PF00551 Formyl transferase AU29_RS11570 PF01522 Polysaccharide deacetylase AU29_RS11575 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AU29_RS11580 PF00892 EamA-like transporter family AU29_RS11595 PF00501 AMP-binding enzyme AU29_RS11595 PF13193 AMP-binding enzyme C-terminal domain AU29_RS11600 PF13378 Enolase C-terminal domain-like AU29_RS11605 PF00378 Enoyl-CoA hydratase/isomerase AU29_RS11610 PF12697 Alpha/beta hydrolase family AU29_RS11615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AU29_RS11615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AU29_RS11615 PF16582 Middle domain of thiamine pyrophosphate AU29_RS11620 PF00425 chorismate binding enzyme AU29_RS11625 PF05957 Bacterial protein of unknown function (DUF883) AU29_RS11630 PF13673 Acetyltransferase (GNAT) domain AU29_RS11635 PF12706 Beta-lactamase superfamily domain AU29_RS11640 PF00072 Response regulator receiver domain AU29_RS11640 PF01584 CheW-like domain AU29_RS11645 PF12034 Domain of unknown function (DUF3520) AU29_RS11645 PF00092 von Willebrand factor type A domain AU29_RS11645 PF12450 von Willebrand factor AU29_RS11650 PF00361 Proton-conducting membrane transporter AU29_RS11655 PF00361 Proton-conducting membrane transporter AU29_RS11660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AU29_RS11660 PF00361 Proton-conducting membrane transporter AU29_RS11665 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AU29_RS11670 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AU29_RS11675 PF12838 4Fe-4S dicluster domain AU29_RS11680 PF00146 NADH dehydrogenase AU29_RS11685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS11685 PF00384 Molybdopterin oxidoreductase AU29_RS11685 PF01568 Molydopterin dinucleotide binding domain AU29_RS11685 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AU29_RS11690 PF10531 SLBB domain AU29_RS11690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AU29_RS11690 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AU29_RS11700 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AU29_RS11700 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AU29_RS11705 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AU29_RS11710 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AU29_RS11720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS11720 PF03466 LysR substrate binding domain AU29_RS11730 PF00155 Aminotransferase class I and II AU29_RS11740 PF03600 Citrate transporter AU29_RS11740 PF02080 TrkA-C domain AU29_RS11745 PF13419 Haloacid dehalogenase-like hydrolase AU29_RS11750 PF03887 YfbU domain AU29_RS11755 PF04217 Protein of unknown function, DUF412 AU29_RS11760 PF00871 Acetokinase family AU29_RS11765 PF07085 DRTGG domain AU29_RS11765 PF01515 Phosphate acetyl/butaryl transferase AU29_RS11770 PF03606 C4-dicarboxylate anaerobic carrier AU29_RS11775 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AU29_RS11775 PF02780 Transketolase, C-terminal domain AU29_RS11775 PF02779 Transketolase, pyrimidine binding domain AU29_RS11780 PF00456 Transketolase, thiamine diphosphate binding domain AU29_RS11785 PF03611 PTS system sugar-specific permease component AU29_RS11795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AU29_RS11805 PF00356 Bacterial regulatory proteins, lacI family AU29_RS11810 PF00293 NUDIX domain AU29_RS11815 PF12850 Calcineurin-like phosphoesterase superfamily domain AU29_RS11820 PF02798 Glutathione S-transferase, N-terminal domain AU29_RS11820 PF14834 Glutathione S-transferase, C-terminal domain AU29_RS11825 PF02798 Glutathione S-transferase, N-terminal domain AU29_RS11825 PF00043 Glutathione S-transferase, C-terminal domain AU29_RS11830 PF08338 Domain of unknown function (DUF1731) AU29_RS11830 PF01370 NAD dependent epimerase/dehydratase family AU29_RS11835 PF00005 ABC transporter AU29_RS11840 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS11845 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS11850 PF00497 Bacterial extracellular solute-binding proteins, family 3 AU29_RS11855 PF00497 Bacterial extracellular solute-binding proteins, family 3 AU29_RS11860 PF02441 Flavoprotein AU29_RS11865 PF00324 Amino acid permease AU29_RS11870 PF01168 Alanine racemase, N-terminal domain AU29_RS11875 PF13520 Amino acid permease AU29_RS11880 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AU29_RS11880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AU29_RS11885 PF02954 Bacterial regulatory protein, Fis family AU29_RS11885 PF00158 Sigma-54 interaction domain AU29_RS11885 PF13426 PAS domain AU29_RS11890 PF00156 Phosphoribosyl transferase domain AU29_RS11895 PF02674 Colicin V production protein AU29_RS11900 PF05036 Sporulation related domain AU29_RS11905 PF02875 Mur ligase family, glutamate ligase domain AU29_RS11905 PF08245 Mur ligase middle domain AU29_RS11910 PF01039 Carboxyl transferase domain AU29_RS11910 PF17848 Acetyl-coA carboxylase zinc finger domain AU29_RS11915 PF09335 SNARE associated Golgi protein AU29_RS11920 PF01416 tRNA pseudouridine synthase AU29_RS11925 PF01118 Semialdehyde dehydrogenase, NAD binding domain AU29_RS11925 PF02774 Semialdehyde dehydrogenase, dimerisation domain AU29_RS11930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AU29_RS11930 PF11890 Domain of unknown function (DUF3410) AU29_RS11930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AU29_RS11940 PF07690 Major Facilitator Superfamily AU29_RS11950 PF13693 Winged helix-turn-helix DNA-binding AU29_RS11965 PF02517 CPBP intramembrane metalloprotease AU29_RS11970 PF02801 Beta-ketoacyl synthase, C-terminal domain AU29_RS11970 PF00109 Beta-ketoacyl synthase, N-terminal domain AU29_RS11975 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AU29_RS11975 PF01266 FAD dependent oxidoreductase AU29_RS11980 PF08891 YfcL protein AU29_RS11985 PF04315 Elongation factor P hydroxylase AU29_RS11990 PF01925 Sulfite exporter TauE/SafE AU29_RS11995 PF03411 Penicillin-insensitive murein endopeptidase AU29_RS12000 PF01264 Chorismate synthase AU29_RS12005 PF05175 Methyltransferase small domain AU29_RS12010 PF01713 Smr domain AU29_RS12015 PF00300 Histidine phosphatase superfamily (branch 1) AU29_RS12020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AU29_RS12020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AU29_RS12020 PF00378 Enoyl-CoA hydratase/isomerase AU29_RS12025 PF02803 Thiolase, C-terminal domain AU29_RS12025 PF00108 Thiolase, N-terminal domain AU29_RS12030 PF04175 Protein of unknown function (DUF406) AU29_RS12035 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AU29_RS12040 PF04333 MlaA lipoprotein AU29_RS12045 PF01226 Formate/nitrite transporter AU29_RS12055 PF04138 GtrA-like protein AU29_RS12060 PF00535 Glycosyl transferase family 2 AU29_RS12065 PF01757 Acyltransferase family AU29_RS12075 PF01278 Omptin family AU29_RS12080 PF14532 Sigma-54 interaction domain AU29_RS12080 PF00072 Response regulator receiver domain AU29_RS12080 PF02954 Bacterial regulatory protein, Fis family AU29_RS12085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS12085 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS12085 PF00672 HAMP domain AU29_RS12095 PF07690 Major Facilitator Superfamily AU29_RS12100 PF10810 Protein of unknown function (DUF2545) AU29_RS12110 PF03279 Bacterial lipid A biosynthesis acyltransferase AU29_RS12115 PF00155 Aminotransferase class I and II AU29_RS12120 PF02685 Glucokinase AU29_RS12125 PF00654 Voltage gated chloride channel AU29_RS12130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AU29_RS12130 PF00205 Thiamine pyrophosphate enzyme, central domain AU29_RS12130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AU29_RS12135 PF00248 Aldo/keto reductase family AU29_RS12140 PF10697 Protein of unknown function (DUF2502) AU29_RS12145 PF01566 Natural resistance-associated macrophage protein AU29_RS12150 PF07670 Nucleoside recognition AU29_RS12150 PF07662 Na+ dependent nucleoside transporter C-terminus AU29_RS12150 PF01773 Na+ dependent nucleoside transporter N-terminus AU29_RS12155 PF05231 MASE1 AU29_RS12155 PF00563 EAL domain AU29_RS12165 PF07037 Putative transcription regulator (DUF1323) AU29_RS12170 PF07037 Putative transcription regulator (DUF1323) AU29_RS12175 PF00749 tRNA synthetases class I (E and Q), catalytic domain AU29_RS12200 PF03466 LysR substrate binding domain AU29_RS12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS12210 PF03825 Nucleoside H+ symporter AU29_RS12215 PF01048 Phosphorylase superfamily AU29_RS12220 PF03502 Nucleoside-specific channel-forming protein, Tsx AU29_RS12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS12225 PF03466 LysR substrate binding domain AU29_RS12230 PF13593 SBF-like CPA transporter family (DUF4137) AU29_RS12235 PF12843 Putative quorum-sensing-regulated virulence factor AU29_RS12240 PF01653 NAD-dependent DNA ligase adenylation domain AU29_RS12240 PF03120 NAD-dependent DNA ligase OB-fold domain AU29_RS12240 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AU29_RS12240 PF12826 Helix-hairpin-helix motif AU29_RS12240 PF00533 BRCA1 C Terminus (BRCT) domain AU29_RS12245 PF04354 ZipA, C-terminal FtsZ-binding domain AU29_RS12255 PF00291 Pyridoxal-phosphate dependent enzyme AU29_RS12265 PF00381 PTS HPr component phosphorylation site AU29_RS12270 PF00391 PEP-utilising enzyme, mobile domain AU29_RS12270 PF02896 PEP-utilising enzyme, TIM barrel domain AU29_RS12270 PF05524 PEP-utilising enzyme, N-terminal AU29_RS12275 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AU29_RS12285 PF08543 Phosphomethylpyrimidine kinase AU29_RS12290 PF00155 Aminotransferase class I and II AU29_RS12290 PF00392 Bacterial regulatory proteins, gntR family AU29_RS12295 PF00117 Glutamine amidotransferase class-I AU29_RS12300 PF17263 Family of unknown function (DUF5329) AU29_RS12310 PF00291 Pyridoxal-phosphate dependent enzyme AU29_RS12315 PF00005 ABC transporter AU29_RS12320 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS12325 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS12340 PF04261 Dyp-type peroxidase family AU29_RS12345 PF06572 Protein of unknown function (DUF1131) AU29_RS12350 PF11143 Protein of unknown function (DUF2919) AU29_RS12355 PF00583 Acetyltransferase (GNAT) family AU29_RS12360 PF01520 N-acetylmuramoyl-L-alanine amidase AU29_RS12365 PF01218 Coproporphyrinogen III oxidase AU29_RS12375 PF12833 Helix-turn-helix domain AU29_RS12380 PF16365 Ethanolamine utilization protein EutK C-terminus AU29_RS12380 PF00936 BMC domain AU29_RS12385 PF00936 BMC domain AU29_RS12390 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AU29_RS12395 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AU29_RS12400 PF06277 Ethanolamine utilisation protein EutA AU29_RS12405 PF04346 Ethanolamine utilisation protein, EutH AU29_RS12410 PF00465 Iron-containing alcohol dehydrogenase AU29_RS12420 PF00171 Aldehyde dehydrogenase family AU29_RS12425 PF03319 Ethanolamine utilisation protein EutN/carboxysome AU29_RS12430 PF00936 BMC domain AU29_RS12435 PF01515 Phosphate acetyl/butaryl transferase AU29_RS12440 PF01923 Cobalamin adenosyltransferase AU29_RS12445 PF06249 Ethanolamine utilisation protein EutQ AU29_RS12450 PF10662 Ethanolamine utilisation - propanediol utilisation AU29_RS12455 PF00936 BMC domain AU29_RS12460 PF01515 Phosphate acetyl/butaryl transferase AU29_RS12460 PF03949 Malic enzyme, NAD binding domain AU29_RS12460 PF00390 Malic enzyme, N-terminal domain AU29_RS12465 PF00923 Transaldolase/Fructose-6-phosphate aldolase AU29_RS12470 PF00456 Transketolase, thiamine diphosphate binding domain AU29_RS12470 PF02780 Transketolase, C-terminal domain AU29_RS12470 PF02779 Transketolase, pyrimidine binding domain AU29_RS12480 PF06674 Protein of unknown function (DUF1176) AU29_RS12485 PF00293 NUDIX domain AU29_RS12490 PF00144 Beta-lactamase AU29_RS12495 PF13247 4Fe-4S dicluster domain AU29_RS12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS12495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AU29_RS12500 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AU29_RS12500 PF07730 Histidine kinase AU29_RS12500 PF00672 HAMP domain AU29_RS12500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS12505 PF00873 AcrB/AcrD/AcrF family AU29_RS12510 PF03960 ArsC family AU29_RS12515 PF07687 Peptidase dimerisation domain AU29_RS12515 PF01546 Peptidase family M20/M25/M40 AU29_RS12520 PF13980 Uncharacterised protein family (UPF0370) AU29_RS12525 PF17176 tRNA-binding domain AU29_RS12525 PF08351 Domain of unknown function (DUF1726) AU29_RS12525 PF13718 GNAT acetyltransferase 2 AU29_RS12525 PF05127 Helicase AU29_RS12530 PF04228 Putative neutral zinc metallopeptidase AU29_RS12535 PF01259 SAICAR synthetase AU29_RS12540 PF06804 NlpB/DapX lipoprotein AU29_RS12545 PF00701 Dihydrodipicolinate synthetase family AU29_RS12550 PF01842 ACT domain AU29_RS12555 PF00578 AhpC/TSA family AU29_RS12560 PF02595 Glycerate kinase family AU29_RS12565 PF02447 GntP family permease AU29_RS12570 PF13556 PucR C-terminal helix-turn-helix domain AU29_RS12570 PF17853 GGDEF-like domain AU29_RS12570 PF05651 Putative sugar diacid recognition AU29_RS12575 PF01594 AI-2E family transporter AU29_RS12580 PF01435 Peptidase family M48 AU29_RS12585 PF03960 ArsC family AU29_RS12590 PF00308 Bacterial dnaA protein AU29_RS12595 PF00860 Permease family AU29_RS12605 PF02769 AIR synthase related protein, C-terminal domain AU29_RS12605 PF00586 AIR synthase related protein, N-terminal domain AU29_RS12610 PF00551 Formyl transferase AU29_RS12615 PF13090 Polyphosphate kinase C-terminal domain 2 AU29_RS12615 PF17941 Polyphosphate kinase C-terminal domain 1 AU29_RS12615 PF02503 Polyphosphate kinase middle domain AU29_RS12615 PF13089 Polyphosphate kinase N-terminal domain AU29_RS12620 PF02541 Ppx/GppA phosphatase family AU29_RS12625 PF00563 EAL domain AU29_RS12625 PF05231 MASE1 AU29_RS12635 PF11119 Protein of unknown function (DUF2633) AU29_RS12650 PF00117 Glutamine amidotransferase class-I AU29_RS12650 PF00958 GMP synthase C terminal domain AU29_RS12650 PF02540 NAD synthase AU29_RS12655 PF00478 IMP dehydrogenase / GMP reductase domain AU29_RS12655 PF00571 CBS domain AU29_RS12660 PF13742 OB-fold nucleic acid binding domain AU29_RS12660 PF02601 Exonuclease VII, large subunit AU29_RS12665 PF03797 Autotransporter beta-domain AU29_RS12685 PF02368 Bacterial Ig-like domain (group 2) AU29_RS12685 PF01476 LysM domain AU29_RS12685 PF11924 Inverse autotransporter, beta-domain AU29_RS12685 PF07979 Intimin C-type lectin domain AU29_RS12685 PF02369 Bacterial Ig-like domain (group 1) AU29_RS12690 PF07191 zinc-ribbons AU29_RS12695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AU29_RS12695 PF01926 50S ribosome-binding GTPase AU29_RS12700 PF13360 PQQ-like domain AU29_RS12705 PF09976 Tetratricopeptide repeat-like domain AU29_RS12710 PF13393 Histidyl-tRNA synthetase AU29_RS12710 PF03129 Anticodon binding domain AU29_RS12715 PF04551 GcpE protein AU29_RS12720 PF13464 Domain of unknown function (DUF4115) AU29_RS12725 PF04055 Radical SAM superfamily AU29_RS12730 PF00334 Nucleoside diphosphate kinase AU29_RS12745 PF12800 4Fe-4S binding domain AU29_RS12745 PF13247 4Fe-4S dicluster domain AU29_RS12750 PF00384 Molybdopterin oxidoreductase AU29_RS12750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS12750 PF01568 Molydopterin dinucleotide binding domain AU29_RS12755 PF06832 Penicillin-Binding Protein C-terminus Family AU29_RS12755 PF00912 Transglycosylase AU29_RS12755 PF00905 Penicillin binding protein transpeptidase domain AU29_RS12760 PF00207 Alpha-2-macroglobulin family AU29_RS12760 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AU29_RS12760 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AU29_RS12760 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AU29_RS12760 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AU29_RS12760 PF07678 A-macroglobulin TED domain AU29_RS12760 PF07703 Alpha-2-macroglobulin bait region domain AU29_RS12760 PF01835 MG2 domain AU29_RS12760 PF17962 Bacterial macroglobulin domain 6 AU29_RS12765 PF00581 Rhodanese-like domain AU29_RS12775 PF07179 SseB protein N-terminal domain AU29_RS12775 PF14581 SseB protein C-terminal domain AU29_RS12780 PF12404 Peptidase AU29_RS12780 PF00883 Cytosol aminopeptidase family, catalytic domain AU29_RS12785 PF04384 Iron-sulphur cluster assembly AU29_RS12790 PF00111 2Fe-2S iron-sulfur cluster binding domain AU29_RS12795 PF00012 Hsp70 protein AU29_RS12800 PF07743 HSCB C-terminal oligomerisation domain AU29_RS12805 PF01521 Iron-sulphur cluster biosynthesis AU29_RS12810 PF01592 NifU-like N terminal domain AU29_RS12815 PF00266 Aminotransferase class-V AU29_RS12820 PF02082 Transcriptional regulator AU29_RS12825 PF00588 SpoU rRNA Methylase family AU29_RS12830 PF00459 Inositol monophosphatase family AU29_RS12835 PF12146 Serine aminopeptidase, S33 AU29_RS12845 PF00175 Oxidoreductase NAD-binding domain AU29_RS12845 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AU29_RS12850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AU29_RS12850 PF13187 4Fe-4S dicluster domain AU29_RS12850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AU29_RS12855 PF03824 High-affinity nickel-transport protein AU29_RS12865 PF00874 PRD domain AU29_RS12870 PF12832 MFS_1 like family AU29_RS12875 PF00464 Serine hydroxymethyltransferase AU29_RS12880 PF00042 Globin AU29_RS12880 PF00970 Oxidoreductase FAD-binding domain AU29_RS12880 PF00175 Oxidoreductase NAD-binding domain AU29_RS12885 PF00486 Transcriptional regulatory protein, C terminal AU29_RS12885 PF18500 CadC C-terminal domain 1 AU29_RS12890 PF13520 Amino acid permease AU29_RS12895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AU29_RS12895 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AU29_RS12895 PF01276 Orn/Lys/Arg decarboxylase, major domain AU29_RS12900 PF00854 POT family AU29_RS12905 PF00543 Nitrogen regulatory protein P-II AU29_RS12910 PF00158 Sigma-54 interaction domain AU29_RS12910 PF00072 Response regulator receiver domain AU29_RS12915 PF13942 YfhG lipoprotein AU29_RS12920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS12920 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS12925 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AU29_RS12925 PF02769 AIR synthase related protein, C-terminal domain AU29_RS12925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AU29_RS12935 PF00497 Bacterial extracellular solute-binding proteins, family 3 AU29_RS12935 PF01464 Transglycosylase SLT domain AU29_RS12940 PF14437 MafB19-like deaminase AU29_RS12950 PF00367 phosphotransferase system, EIIB AU29_RS12950 PF02378 Phosphotransferase system, EIIC AU29_RS12955 PF01380 SIS domain AU29_RS12960 PF01418 Helix-turn-helix domain, rpiR family AU29_RS12960 PF01380 SIS domain AU29_RS12965 PF02558 Ketopantoate reductase PanE/ApbA AU29_RS12965 PF08546 Ketopantoate reductase PanE/ApbA C terminal AU29_RS12970 PF07690 Major Facilitator Superfamily AU29_RS12975 PF03466 LysR substrate binding domain AU29_RS12975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS12980 PF12838 4Fe-4S dicluster domain AU29_RS12985 PF01648 4'-phosphopantetheinyl transferase superfamily AU29_RS12990 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AU29_RS12995 PF02565 Recombination protein O C terminal AU29_RS12995 PF11967 Recombination protein O N terminal AU29_RS13000 PF07650 KH domain AU29_RS13000 PF01926 50S ribosome-binding GTPase AU29_RS13005 PF00035 Double-stranded RNA binding motif AU29_RS13005 PF14622 Ribonuclease-III-like AU29_RS13010 PF10502 Signal peptidase, peptidase S26 AU29_RS13015 PF03144 Elongation factor Tu domain 2 AU29_RS13015 PF06421 GTP-binding protein LepA C-terminus AU29_RS13015 PF00009 Elongation factor Tu GTP binding domain AU29_RS13015 PF00679 Elongation factor G C-terminus AU29_RS13025 PF17188 MucB/RseB C-terminal domain AU29_RS13025 PF03888 MucB/RseB N-terminal domain AU29_RS13030 PF03873 Anti sigma-E protein RseA, C-terminal domain AU29_RS13030 PF03872 Anti sigma-E protein RseA, N-terminal domain AU29_RS13035 PF04542 Sigma-70 region 2 AU29_RS13035 PF08281 Sigma-70, region 4 AU29_RS13040 PF00890 FAD binding domain AU29_RS13040 PF02910 Fumarate reductase flavoprotein C-term AU29_RS13045 PF05175 Methyltransferase small domain AU29_RS13050 PF00270 DEAD/DEAH box helicase AU29_RS13050 PF00271 Helicase conserved C-terminal domain AU29_RS13055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS13055 PF03466 LysR substrate binding domain AU29_RS13060 PF01810 LysE type translocator AU29_RS13065 PF01228 Glycine radical AU29_RS13070 PF03167 Uracil DNA glycosylase superfamily AU29_RS13075 PF00588 SpoU rRNA Methylase family AU29_RS13075 PF08032 RNA 2'-O ribose methyltransferase substrate binding AU29_RS13080 PF00085 Thioredoxin AU29_RS13085 PF03942 DTW domain AU29_RS13090 PF13380 CoA binding domain AU29_RS13090 PF00583 Acetyltransferase (GNAT) family AU29_RS13090 PF13607 Succinyl-CoA ligase like flavodoxin domain AU29_RS13095 PF13091 PLD-like domain AU29_RS13100 PF10043 Predicted periplasmic lipoprotein (DUF2279) AU29_RS13105 PF00083 Sugar (and other) transporter AU29_RS13135 PF00004 ATPase family associated with various cellular activities (AAA) AU29_RS13135 PF17871 AAA lid domain AU29_RS13135 PF10431 C-terminal, D2-small domain, of ClpB protein AU29_RS13135 PF02861 Clp amino terminal domain, pathogenicity island component AU29_RS13135 PF07724 AAA domain (Cdc48 subfamily) AU29_RS13140 PF02578 Multi-copper polyphenol oxidoreductase laccase AU29_RS13145 PF00849 RNA pseudouridylate synthase AU29_RS13145 PF01479 S4 domain AU29_RS13150 PF13525 Outer membrane lipoprotein AU29_RS13155 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AU29_RS13160 PF01817 Chorismate mutase type II AU29_RS13160 PF00800 Prephenate dehydratase AU29_RS13165 PF08450 SMP-30/Gluconolactonase/LRE-like region AU29_RS13170 PF02153 Prephenate dehydrogenase AU29_RS13170 PF01817 Chorismate mutase type II AU29_RS13175 PF00793 DAHP synthetase I family AU29_RS13180 PF13689 YfiR/HmsC-like AU29_RS13185 PF17152 Periplasmic sensor domain AU29_RS13185 PF00990 Diguanylate cyclase, GGDEF domain AU29_RS13190 PF01245 Ribosomal protein L19 AU29_RS13195 PF01746 tRNA (Guanine-1)-methyltransferase AU29_RS13200 PF05239 PRC-barrel domain AU29_RS13200 PF01782 RimM N-terminal domain AU29_RS13205 PF00886 Ribosomal protein S16 AU29_RS13210 PF00448 SRP54-type protein, GTPase domain AU29_RS13210 PF02978 Signal peptide binding domain AU29_RS13210 PF02881 SRP54-type protein, helical bundle domain AU29_RS13215 PF01578 Cytochrome C assembly protein AU29_RS13220 PF00571 CBS domain AU29_RS13220 PF03471 Transporter associated domain AU29_RS13220 PF01595 Cyclin M transmembrane N-terminal domain AU29_RS13230 PF01025 GrpE AU29_RS13235 PF01513 ATP-NAD kinase AU29_RS13240 PF02463 RecF/RecN/SMC N terminal domain AU29_RS13245 PF04355 SmpA / OmlA family AU29_RS13250 PF03658 RnfH family Ubiquitin AU29_RS13255 PF03364 Polyketide cyclase / dehydrase and lipid transport AU29_RS13260 PF01668 SmpB protein AU29_RS13275 PF00664 ABC transporter transmembrane region AU29_RS13275 PF00005 ABC transporter AU29_RS13280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AU29_RS13280 PF00529 HlyD membrane-fusion protein of T1SS AU29_RS13285 PF04606 Ogr/Delta-like zinc finger AU29_RS13325 PF02796 Helix-turn-helix domain of resolvase AU29_RS13325 PF00239 Resolvase, N terminal domain AU29_RS13335 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AU29_RS13340 PF07484 Phage Tail Collar Domain AU29_RS13340 PF03335 Phage tail fibre repeat AU29_RS13340 PF08400 Prophage tail fibre N-terminal AU29_RS13445 PF06183 DinI-like family AU29_RS13455 PF05840 Bacteriophage replication gene A protein (GPA) AU29_RS13460 PF02086 D12 class N6 adenine-specific DNA methyltransferase AU29_RS13465 PF01258 Prokaryotic dksA/traR C4-type zinc finger AU29_RS13475 PF17282 Family of unknown function (DUF5347) AU29_RS13485 PF06892 Phage regulatory protein CII (CP76) AU29_RS13495 PF16452 Bacteriophage CI repressor C-terminal domain AU29_RS13495 PF07022 Bacteriophage CI repressor helix-turn-helix domain AU29_RS13500 PF00589 Phage integrase family AU29_RS13500 PF02899 Phage integrase, N-terminal SAM-like domain AU29_RS13525 PF13683 Integrase core domain AU29_RS13525 PF13276 HTH-like domain AU29_RS13530 PF01527 Transposase AU29_RS13535 PF01797 Transposase IS200 like AU29_RS13540 PF06722 Protein of unknown function (DUF1205) AU29_RS13545 PF00664 ABC transporter transmembrane region AU29_RS13545 PF00005 ABC transporter AU29_RS13555 PF00756 Putative esterase AU29_RS13560 PF00593 TonB dependent receptor AU29_RS13560 PF07715 TonB-dependent Receptor Plug Domain AU29_RS13570 PF00805 Pentapeptide repeats (8 copies) AU29_RS13575 PF04393 Protein of unknown function (DUF535) AU29_RS13590 PF03824 High-affinity nickel-transport protein AU29_RS13595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS13595 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS13600 PF00486 Transcriptional regulatory protein, C terminal AU29_RS13600 PF00072 Response regulator receiver domain AU29_RS13620 PF01970 Tripartite tricarboxylate transporter TctA family AU29_RS13625 PF08943 CsiD AU29_RS13630 PF01266 FAD dependent oxidoreductase AU29_RS13635 PF00171 Aldehyde dehydrogenase family AU29_RS13640 PF00202 Aminotransferase class-III AU29_RS13645 PF00324 Amino acid permease AU29_RS13650 PF07729 FCD domain AU29_RS13650 PF00392 Bacterial regulatory proteins, gntR family AU29_RS13655 PF01476 LysM domain AU29_RS13655 PF04972 BON domain AU29_RS13660 PF01679 Proteolipid membrane potential modulator AU29_RS13665 PF01022 Bacterial regulatory protein, arsR family AU29_RS13670 PF00581 Rhodanese-like domain AU29_RS13670 PF11127 Protein of unknown function (DUF2892) AU29_RS13680 PF00816 H-NS histone family AU29_RS13685 PF06610 L-alanine exporter AU29_RS13690 PF09400 Protein of unknown function (DUF2002) AU29_RS13695 PF05957 Bacterial protein of unknown function (DUF883) AU29_RS13700 PF00155 Aminotransferase class I and II AU29_RS13700 PF00392 Bacterial regulatory proteins, gntR family AU29_RS13705 PF02627 Carboxymuconolactone decarboxylase family AU29_RS13715 PF00462 Glutaredoxin AU29_RS13720 PF07972 NrdI Flavodoxin like AU29_RS13725 PF02867 Ribonucleotide reductase, barrel domain AU29_RS13725 PF08343 Ribonucleotide reductase N-terminal AU29_RS13725 PF00317 Ribonucleotide reductase, all-alpha domain AU29_RS13730 PF00268 Ribonucleotide reductase, small chain AU29_RS13735 PF00571 CBS domain AU29_RS13735 PF00005 ABC transporter AU29_RS13740 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS13745 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AU29_RS13750 PF07690 Major Facilitator Superfamily AU29_RS13755 PF01047 MarR family AU29_RS13760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AU29_RS13760 PF00529 HlyD membrane-fusion protein of T1SS AU29_RS13765 PF07690 Major Facilitator Superfamily AU29_RS13775 PF02664 S-Ribosylhomocysteinase (LuxS) AU29_RS13780 PF04262 Glutamate-cysteine ligase AU29_RS13785 PF09335 SNARE associated Golgi protein AU29_RS13790 PF13419 Haloacid dehalogenase-like hydrolase AU29_RS13820 PF02599 Global regulator protein family AU29_RS13825 PF02272 DHHA1 domain AU29_RS13825 PF01411 tRNA synthetases class II (A) AU29_RS13825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AU29_RS13830 PF02631 RecX family AU29_RS13835 PF00154 recA bacterial DNA recombination protein AU29_RS13840 PF02464 Competence-damaged protein AU29_RS13845 PF13406 Transglycosylase SLT domain AU29_RS13850 PF03608 PTS system enzyme II sorbitol-specific factor AU29_RS13855 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AU29_RS13855 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AU29_RS13860 PF03829 PTS system glucitol/sorbitol-specific IIA component AU29_RS13865 PF00106 short chain dehydrogenase AU29_RS13870 PF06923 Glucitol operon activator protein (GutM) AU29_RS13880 PF08220 DeoR-like helix-turn-helix domain AU29_RS13880 PF00455 DeoR C terminal sensor domain AU29_RS13885 PF00571 CBS domain AU29_RS13885 PF01380 SIS domain AU29_RS13890 PF00158 Sigma-54 interaction domain AU29_RS13890 PF01590 GAF domain AU29_RS13895 PF00753 Metallo-beta-lactamase superfamily AU29_RS13895 PF00258 Flavodoxin AU29_RS13895 PF00301 Rubredoxin AU29_RS13900 PF18113 Rubredoxin binding C-terminal domain AU29_RS13900 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS13905 PF00708 Acylphosphatase AU29_RS13905 PF07503 HypF finger AU29_RS13905 PF01300 Telomere recombination AU29_RS13905 PF17788 HypF Kae1-like domain AU29_RS13910 PF13247 4Fe-4S dicluster domain AU29_RS13910 PF12800 4Fe-4S binding domain AU29_RS13920 PF01750 Hydrogenase maturation protease AU29_RS13925 PF07450 Formate hydrogenlyase maturation protein HycH AU29_RS13930 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AU29_RS13935 PF12838 4Fe-4S dicluster domain AU29_RS13940 PF00374 Nickel-dependent hydrogenase AU29_RS13940 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AU29_RS13940 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AU29_RS13945 PF00146 NADH dehydrogenase AU29_RS13950 PF00361 Proton-conducting membrane transporter AU29_RS13955 PF13247 4Fe-4S dicluster domain AU29_RS13960 PF11046 Transcriptional repressor of hyc and hyp operons AU29_RS13965 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AU29_RS13970 PF02492 CobW/HypB/UreG, nucleotide-binding domain AU29_RS13975 PF01455 HupF/HypC family AU29_RS13980 PF01924 Hydrogenase formation hypA family AU29_RS13985 PF02769 AIR synthase related protein, C-terminal domain AU29_RS13985 PF00586 AIR synthase related protein, N-terminal domain AU29_RS13990 PF02954 Bacterial regulatory protein, Fis family AU29_RS13990 PF01590 GAF domain AU29_RS13990 PF00158 Sigma-54 interaction domain AU29_RS13995 PF11756 Nitrous oxide-stimulated promoter AU29_RS14000 PF01297 Zinc-uptake complex component A periplasmic AU29_RS14005 PF00005 ABC transporter AU29_RS14010 PF00950 ABC 3 transport family AU29_RS14015 PF00950 ABC 3 transport family AU29_RS14020 PF03421 YopJ Serine/Threonine acetyltransferase AU29_RS14030 PF12833 Helix-turn-helix domain AU29_RS14045 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) AU29_RS14050 PF01514 Secretory protein of YscJ/FliF family AU29_RS14060 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AU29_RS14065 PF09480 Type III secretion system protein PrgH-EprH (PrgH) AU29_RS14070 PF12833 Helix-turn-helix domain AU29_RS14075 PF00486 Transcriptional regulatory protein, C terminal AU29_RS14080 PF01464 Transglycosylase SLT domain AU29_RS14085 PF03545 Yersinia virulence determinant (YopE) AU29_RS14085 PF09119 SicP binding AU29_RS14085 PF00102 Protein-tyrosine phosphatase AU29_RS14090 PF05932 Tir chaperone protein (CesT) family AU29_RS14100 PF00550 Phosphopantetheine attachment site AU29_RS14105 PF09052 SipA N-terminal domain AU29_RS14110 PF06511 Type III secretion systems tip complex components AU29_RS14115 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) AU29_RS14120 PF16535 Type III cell invasion protein SipB AU29_RS14120 PF04888 Secretion system effector C (SseC) like family AU29_RS14125 PF07720 Tetratricopeptide repeat AU29_RS14130 PF01312 FlhB HrpN YscU SpaS Family AU29_RS14135 PF01311 Bacterial export proteins, family 1 AU29_RS14140 PF01313 Bacterial export proteins, family 3 AU29_RS14145 PF00813 FliP family AU29_RS14150 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AU29_RS14155 PF02510 Surface presentation of antigens protein AU29_RS14160 PF02090 Salmonella surface presentation of antigen gene type M protein AU29_RS14165 PF02874 ATP synthase alpha/beta family, beta-barrel domain AU29_RS14165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AU29_RS14165 PF18269 T3SS EscN ATPase C-terminal domain AU29_RS14170 PF03519 Invasion protein B family AU29_RS14175 PF00771 FHIPEP family AU29_RS14180 PF07201 HrpJ-like domain AU29_RS14185 PF00263 Bacterial type II and III secretion system protein AU29_RS14185 PF03958 Bacterial type II/III secretion system short domain AU29_RS14190 PF12833 Helix-turn-helix domain AU29_RS14195 PF04741 InvH outer membrane lipoprotein AU29_RS14210 PF13737 Transposase DDE domain AU29_RS14215 PF00149 Calcineurin-like phosphoesterase AU29_RS14235 PF01624 MutS domain I AU29_RS14235 PF05188 MutS domain II AU29_RS14235 PF05192 MutS domain III AU29_RS14235 PF00488 MutS domain V AU29_RS14235 PF05190 MutS family domain IV AU29_RS14245 PF07690 Major Facilitator Superfamily AU29_RS14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS14250 PF03466 LysR substrate binding domain AU29_RS14255 PF02447 GntP family permease AU29_RS14260 PF01370 NAD dependent epimerase/dehydratase family AU29_RS14265 PF01261 Xylose isomerase-like TIM barrel AU29_RS14270 PF00596 Class II Aldolase and Adducin N-terminal domain AU29_RS14275 PF07005 Sugar-binding N-terminal domain AU29_RS14275 PF17042 Nucleotide-binding C-terminal domain AU29_RS14280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AU29_RS14280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AU29_RS14285 PF00455 DeoR C terminal sensor domain AU29_RS14285 PF08220 DeoR-like helix-turn-helix domain AU29_RS14290 PF01047 MarR family AU29_RS14295 PF02441 Flavoprotein AU29_RS14300 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AU29_RS14310 PF04542 Sigma-70 region 2 AU29_RS14310 PF04545 Sigma-70, region 4 AU29_RS14310 PF04539 Sigma-70 region 3 AU29_RS14310 PF00140 Sigma-70 factor, region 1.2 AU29_RS14315 PF01551 Peptidase family M23 AU29_RS14315 PF01476 LysM domain AU29_RS14325 PF01975 Survival protein SurE AU29_RS14330 PF01142 tRNA pseudouridine synthase D (TruD) AU29_RS14335 PF02542 YgbB family AU29_RS14340 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AU29_RS14345 PF04977 Septum formation initiator AU29_RS14350 PF12084 Protein of unknown function (DUF3561) AU29_RS14360 PF00009 Elongation factor Tu GTP binding domain AU29_RS14365 PF01507 Phosphoadenosine phosphosulfate reductase family AU29_RS14370 PF04389 Peptidase family M28 AU29_RS14375 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) AU29_RS14380 PF01867 CRISPR associated protein Cas1 AU29_RS14395 PF09344 CT1975-like protein AU29_RS14405 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) AU29_RS14410 PF00271 Helicase conserved C-terminal domain AU29_RS14410 PF00270 DEAD/DEAH box helicase AU29_RS14410 PF18019 HD domain AU29_RS14415 PF11047 Salmonella outer protein D AU29_RS14420 PF01507 Phosphoadenosine phosphosulfate reductase family AU29_RS14425 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AU29_RS14425 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AU29_RS14430 PF00667 FAD binding domain AU29_RS14430 PF00258 Flavodoxin AU29_RS14430 PF00175 Oxidoreductase NAD-binding domain AU29_RS14435 PF01242 6-pyruvoyl tetrahydropterin synthase AU29_RS14440 PF03099 Biotin/lipoate A/B protein ligase family AU29_RS14440 PF12706 Beta-lactamase superfamily domain AU29_RS14445 PF04055 Radical SAM superfamily AU29_RS14450 PF03952 Enolase, N-terminal domain AU29_RS14450 PF00113 Enolase, C-terminal TIM barrel domain AU29_RS14455 PF00117 Glutamine amidotransferase class-I AU29_RS14455 PF06418 CTP synthase N-terminus AU29_RS14460 PF03819 MazG nucleotide pyrophosphohydrolase domain AU29_RS14465 PF00419 Fimbrial protein AU29_RS14470 PF13953 PapC C-terminal domain AU29_RS14470 PF13954 PapC N-terminal domain AU29_RS14470 PF00577 Outer membrane usher protein AU29_RS14475 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS14475 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS14480 PF00419 Fimbrial protein AU29_RS14490 PF00419 Fimbrial protein AU29_RS14500 PF02824 TGS domain AU29_RS14500 PF04607 Region found in RelA / SpoT proteins AU29_RS14500 PF13291 ACT domain AU29_RS14505 PF01938 TRAM domain AU29_RS14505 PF05958 tRNA (Uracil-5-)-methyltransferase AU29_RS14510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AU29_RS14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS14510 PF00072 Response regulator receiver domain AU29_RS14510 PF00672 HAMP domain AU29_RS14510 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS14510 PF01627 Hpt domain AU29_RS14515 PF02595 Glycerate kinase family AU29_RS14520 PF13378 Enolase C-terminal domain-like AU29_RS14525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AU29_RS14525 PF13378 Enolase C-terminal domain-like AU29_RS14530 PF07690 Major Facilitator Superfamily AU29_RS14535 PF00258 Flavodoxin AU29_RS14540 PF00849 RNA pseudouridylate synthase AU29_RS14545 PF04287 tRNA pseudouridine synthase C AU29_RS14550 PF07348 Syd protein (SUKH-2) AU29_RS14555 PF14489 QueF-like protein AU29_RS14555 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AU29_RS14560 PF11892 Domain of unknown function (DUF3412) AU29_RS14560 PF03641 Possible lysine decarboxylase AU29_RS14560 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AU29_RS14570 PF03313 Serine dehydratase alpha chain AU29_RS14570 PF03315 Serine dehydratase beta chain AU29_RS14575 PF01367 5'-3' exonuclease, C-terminal SAM fold AU29_RS14575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AU29_RS14580 PF00465 Iron-containing alcohol dehydrogenase AU29_RS14585 PF00596 Class II Aldolase and Adducin N-terminal domain AU29_RS14590 PF07690 Major Facilitator Superfamily AU29_RS14595 PF02952 L-fucose isomerase, C-terminal domain AU29_RS14595 PF07881 L-fucose isomerase, first N-terminal domain AU29_RS14595 PF07882 L-fucose isomerase, second N-terminal domain AU29_RS14600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AU29_RS14600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AU29_RS14605 PF05025 RbsD / FucU transport protein family AU29_RS14610 PF00455 DeoR C terminal sensor domain AU29_RS14610 PF08220 DeoR-like helix-turn-helix domain AU29_RS14615 PF01728 FtsJ-like methyltransferase AU29_RS14615 PF18125 RlmM ferredoxin-like domain AU29_RS14620 PF04241 Protein of unknown function (DUF423) AU29_RS14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS14625 PF03466 LysR substrate binding domain AU29_RS14630 PF06004 Bacterial protein of unknown function (DUF903) AU29_RS14635 PF00266 Aminotransferase class-V AU29_RS14640 PF02657 Fe-S metabolism associated domain AU29_RS14645 PF00892 EamA-like transporter family AU29_RS14650 PF00899 ThiF family AU29_RS14655 PF03562 MltA specific insert domain AU29_RS14655 PF06725 3D domain AU29_RS14665 PF01520 N-acetylmuramoyl-L-alanine amidase AU29_RS14665 PF11741 AMIN domain AU29_RS14670 PF00696 Amino acid kinase family AU29_RS14670 PF00583 Acetyltransferase (GNAT) family AU29_RS14675 PF13538 UvrD-like helicase C-terminal domain AU29_RS14680 PF13361 UvrD-like helicase C-terminal domain AU29_RS14680 PF00580 UvrD/REP helicase N-terminal domain AU29_RS14680 PF12705 PD-(D/E)XK nuclease superfamily AU29_RS14690 PF17946 RecC C-terminal domain AU29_RS14695 PF07963 Prokaryotic N-terminal methylation motif AU29_RS14695 PF12528 Type II secretion prepilin peptidase dependent protein C AU29_RS14700 PF10713 Protein of unknown function (DUF2509) AU29_RS14705 PF07963 Prokaryotic N-terminal methylation motif AU29_RS14710 PF07963 Prokaryotic N-terminal methylation motif AU29_RS14720 PF00303 Thymidylate synthase AU29_RS14725 PF01790 Prolipoprotein diacylglyceryl transferase AU29_RS14730 PF00391 PEP-utilising enzyme, mobile domain AU29_RS14730 PF05524 PEP-utilising enzyme, N-terminal AU29_RS14730 PF02896 PEP-utilising enzyme, TIM barrel domain AU29_RS14730 PF01590 GAF domain AU29_RS14735 PF00293 NUDIX domain AU29_RS14745 PF02976 DNA mismatch repair enzyme MutH AU29_RS14750 PF03741 Integral membrane protein TerC family AU29_RS14755 PF06004 Bacterial protein of unknown function (DUF903) AU29_RS14760 PF00248 Aldo/keto reductase family AU29_RS14765 PF07690 Major Facilitator Superfamily AU29_RS14770 PF01553 Acyltransferase AU29_RS14770 PF00501 AMP-binding enzyme AU29_RS14775 PF00356 Bacterial regulatory proteins, lacI family AU29_RS14780 PF00356 Bacterial regulatory proteins, lacI family AU29_RS14785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AU29_RS14785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AU29_RS14790 PF03466 LysR substrate binding domain AU29_RS14790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS14795 PF01177 Asp/Glu/Hydantoin racemase AU29_RS14800 PF00083 Sugar (and other) transporter AU29_RS14810 PF04962 KduI/IolB family AU29_RS14815 PF00108 Thiolase, N-terminal domain AU29_RS14815 PF02803 Thiolase, C-terminal domain AU29_RS14820 PF03466 LysR substrate binding domain AU29_RS14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS14830 PF03222 Tryptophan/tyrosine permease family AU29_RS14835 PF02583 Metal-sensitive transcriptional repressor AU29_RS14840 PF03824 High-affinity nickel-transport protein AU29_RS14860 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS14860 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS14865 PF13953 PapC C-terminal domain AU29_RS14865 PF13954 PapC N-terminal domain AU29_RS14865 PF00577 Outer membrane usher protein AU29_RS14870 PF00419 Fimbrial protein AU29_RS14880 PF13505 Outer membrane protein beta-barrel domain AU29_RS14885 PF01850 PIN domain AU29_RS14910 PF01476 LysM domain AU29_RS14910 PF01551 Peptidase family M23 AU29_RS14915 PF00293 NUDIX domain AU29_RS14920 PF01336 OB-fold nucleic acid binding domain AU29_RS14920 PF00152 tRNA synthetases class II (D, K and N) AU29_RS14925 PF03462 PCRF domain AU29_RS14925 PF00472 RF-1 domain AU29_RS14930 PF02272 DHHA1 domain AU29_RS14930 PF17768 RecJ OB domain AU29_RS14930 PF01368 DHH family AU29_RS14935 PF13098 Thioredoxin-like domain AU29_RS14935 PF10411 Disulfide bond isomerase protein N-terminus AU29_RS14940 PF02899 Phage integrase, N-terminal SAM-like domain AU29_RS14940 PF00589 Phage integrase family AU29_RS14945 PF00258 Flavodoxin AU29_RS14950 PF07254 Membrane-bound toxin component of toxin-antitoxin system AU29_RS14955 PF03937 Flavinator of succinate dehydrogenase AU29_RS14965 PF01571 Aminomethyltransferase folate-binding domain AU29_RS14970 PF03006 Haemolysin-III related AU29_RS14975 PF04266 ASCH domain AU29_RS14980 PF00232 Glycosyl hydrolase family 1 AU29_RS14990 PF02347 Glycine cleavage system P-protein AU29_RS14995 PF01597 Glycine cleavage H-protein AU29_RS15000 PF08669 Glycine cleavage T-protein C-terminal barrel domain AU29_RS15000 PF01571 Aminomethyltransferase folate-binding domain AU29_RS15005 PF01494 FAD binding domain AU29_RS15010 PF01494 FAD binding domain AU29_RS15015 PF05195 Aminopeptidase P, N-terminal domain AU29_RS15015 PF00557 Metallopeptidase family M24 AU29_RS15020 PF03695 Uncharacterised protein family (UPF0149) AU29_RS15025 PF05164 Cell division protein ZapA AU29_RS15030 PF01812 5-formyltetrahydrofolate cyclo-ligase family AU29_RS15035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AU29_RS15035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AU29_RS15035 PF01842 ACT domain AU29_RS15040 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AU29_RS15045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS15045 PF03466 LysR substrate binding domain AU29_RS15050 PF04402 Protein of unknown function (DUF541) AU29_RS15055 PF01810 LysE type translocator AU29_RS15060 PF05552 Conserved TM helix AU29_RS15060 PF00924 Mechanosensitive ion channel AU29_RS15065 PF01116 Fructose-bisphosphate aldolase class-II AU29_RS15070 PF00162 Phosphoglycerate kinase AU29_RS15075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AU29_RS15075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AU29_RS15095 PF00005 ABC transporter AU29_RS15100 PF00005 ABC transporter AU29_RS15105 PF00456 Transketolase, thiamine diphosphate binding domain AU29_RS15105 PF02780 Transketolase, C-terminal domain AU29_RS15105 PF02779 Transketolase, pyrimidine binding domain AU29_RS15110 PF01435 Peptidase family M48 AU29_RS15115 PF00491 Arginase family AU29_RS15120 PF12697 Alpha/beta hydrolase family AU29_RS15125 PF04074 YhcH/YjgK/YiaL AU29_RS15130 PF02615 Malate/L-lactate dehydrogenase AU29_RS15135 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS15135 PF00107 Zinc-binding dehydrogenase AU29_RS15140 PF01232 Mannitol dehydrogenase Rossmann domain AU29_RS15140 PF08125 Mannitol dehydrogenase C-terminal domain AU29_RS15145 PF13378 Enolase C-terminal domain-like AU29_RS15145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AU29_RS15150 PF07729 FCD domain AU29_RS15150 PF00392 Bacterial regulatory proteins, gntR family AU29_RS15160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AU29_RS15160 PF17810 Arginine decarboxylase helical bundle domain AU29_RS15160 PF17944 Arginine decarboxylase C-terminal helical extension AU29_RS15175 PF00438 S-adenosylmethionine synthetase, N-terminal domain AU29_RS15175 PF02772 S-adenosylmethionine synthetase, central domain AU29_RS15175 PF02773 S-adenosylmethionine synthetase, C-terminal domain AU29_RS15180 PF00083 Sugar (and other) transporter AU29_RS15185 PF10263 SprT-like family AU29_RS15185 PF17283 SprT-like zinc ribbon domain AU29_RS15190 PF04231 Endonuclease I AU29_RS15195 PF04452 RNA methyltransferase AU29_RS15200 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AU29_RS15200 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AU29_RS15205 PF02622 Uncharacterized ACR, COG1678 AU29_RS15210 PF03652 Holliday junction resolvase AU29_RS15220 PF00437 Type II/IV secretion system protein AU29_RS15225 PF01168 Alanine racemase, N-terminal domain AU29_RS15230 PF02325 YGGT family AU29_RS15235 PF02594 Uncharacterised ACR, YggU family COG1872 AU29_RS15240 PF01725 Ham1 family AU29_RS15245 PF04055 Radical SAM superfamily AU29_RS15245 PF06969 HemN C-terminal domain AU29_RS15250 PF06717 Protein of unknown function (DUF1202) AU29_RS15255 PF17763 Glutaminase/Asparaginase C-terminal domain AU29_RS15255 PF00710 Asparaginase, N-terminal AU29_RS15260 PF11101 Protein of unknown function (DUF2884) AU29_RS15265 PF04320 Protein with unknown function (DUF469) AU29_RS15270 PF02390 Putative methyltransferase AU29_RS15275 PF14815 NUDIX domain AU29_RS15275 PF00633 Helix-hairpin-helix motif AU29_RS15275 PF00730 HhH-GPD superfamily base excision DNA repair protein AU29_RS15280 PF04362 Bacterial Fe(2+) trafficking AU29_RS15285 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AU29_RS15285 PF01464 Transglycosylase SLT domain AU29_RS15295 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AU29_RS15295 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AU29_RS15295 PF01276 Orn/Lys/Arg decarboxylase, major domain AU29_RS15305 PF04474 Protein of unknown function (DUF554) AU29_RS15315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AU29_RS15320 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AU29_RS15320 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AU29_RS15325 PF01575 MaoC like domain AU29_RS15330 PF03328 HpcH/HpaI aldolase/citrate lyase family AU29_RS15335 PF03466 LysR substrate binding domain AU29_RS15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS15340 PF00884 Sulfatase AU29_RS15345 PF04055 Radical SAM superfamily AU29_RS15350 PF00196 Bacterial regulatory proteins, luxR family AU29_RS15360 PF13520 Amino acid permease AU29_RS15370 PF01266 FAD dependent oxidoreductase AU29_RS15375 PF00171 Aldehyde dehydrogenase family AU29_RS15380 PF04965 Gene 25-like lysozyme AU29_RS15390 PF01522 Polysaccharide deacetylase AU29_RS15400 PF07690 Major Facilitator Superfamily AU29_RS15405 PF03786 D-mannonate dehydratase (UxuA) AU29_RS15410 PF01232 Mannitol dehydrogenase Rossmann domain AU29_RS15410 PF08125 Mannitol dehydrogenase C-terminal domain AU29_RS15415 PF02614 Glucuronate isomerase AU29_RS15425 PF03738 Glutathionylspermidine synthase preATP-grasp AU29_RS15425 PF05257 CHAP domain AU29_RS15430 PF02798 Glutathione S-transferase, N-terminal domain AU29_RS15440 PF01497 Periplasmic binding protein AU29_RS15445 PF01455 HupF/HypC family AU29_RS15450 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AU29_RS15455 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AU29_RS15460 PF01750 Hydrogenase maturation protease AU29_RS15465 PF00374 Nickel-dependent hydrogenase AU29_RS15470 PF03916 Polysulphide reductase, NrfD AU29_RS15475 PF13247 4Fe-4S dicluster domain AU29_RS15480 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AU29_RS15480 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AU29_RS15485 PF11115 Protein of unknown function (DUF2623) AU29_RS15490 PF00672 HAMP domain AU29_RS15490 PF02203 Tar ligand binding domain homologue AU29_RS15490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AU29_RS15495 PF03350 Uncharacterized protein family, UPF0114 AU29_RS15520 PF02472 Biopolymer transport protein ExbD/TolR AU29_RS15525 PF01618 MotA/TolQ/ExbB proton channel family AU29_RS15535 PF01053 Cys/Met metabolism PLP-dependent enzyme AU29_RS15540 PF09335 SNARE associated Golgi protein AU29_RS15545 PF12833 Helix-turn-helix domain AU29_RS15545 PF06719 AraC-type transcriptional regulator N-terminus AU29_RS15550 PF00465 Iron-containing alcohol dehydrogenase AU29_RS15555 PF00248 Aldo/keto reductase family AU29_RS15560 PF00939 Sodium:sulfate symporter transmembrane region AU29_RS15575 PF11842 Domain of unknown function (DUF3362) AU29_RS15575 PF08497 Radical SAM N-terminal AU29_RS15575 PF04055 Radical SAM superfamily AU29_RS15580 PF03480 Bacterial extracellular solute-binding protein, family 7 AU29_RS15590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AU29_RS15595 PF07732 Multicopper oxidase AU29_RS15595 PF00394 Multicopper oxidase AU29_RS15595 PF07731 Multicopper oxidase AU29_RS15600 PF01553 Acyltransferase AU29_RS15605 PF03989 DNA gyrase C-terminal domain, beta-propeller AU29_RS15605 PF00521 DNA gyrase/topoisomerase IV, subunit A AU29_RS15610 PF06445 GyrI-like small molecule binding domain AU29_RS15615 PF04076 Bacterial OB fold (BOF) protein AU29_RS15620 PF00072 Response regulator receiver domain AU29_RS15620 PF00486 Transcriptional regulatory protein, C terminal AU29_RS15625 PF08521 Two-component sensor kinase N-terminal AU29_RS15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS15625 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS15630 PF02525 Flavodoxin-like fold AU29_RS15635 PF03992 Antibiotic biosynthesis monooxygenase AU29_RS15640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS15640 PF00986 DNA gyrase B subunit, carboxyl terminus AU29_RS15640 PF00204 DNA gyrase B AU29_RS15640 PF01751 Toprim domain AU29_RS15645 PF05728 Uncharacterised protein family (UPF0227) AU29_RS15650 PF00149 Calcineurin-like phosphoesterase AU29_RS15655 PF06853 Protein of unknown function (DUF1249) AU29_RS15660 PF00293 NUDIX domain AU29_RS15665 PF02321 Outer membrane efflux protein AU29_RS15670 PF06693 Protein of unknown function (DUF1190) AU29_RS15675 PF03738 Glutathionylspermidine synthase preATP-grasp AU29_RS15680 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AU29_RS15685 PF02535 ZIP Zinc transporter AU29_RS15695 PF05935 Arylsulfotransferase (ASST) AU29_RS15695 PF17425 Arylsulfotransferase Ig-like domain AU29_RS15700 PF01323 DSBA-like thioredoxin domain AU29_RS15705 PF02600 Disulfide bond formation protein DsbB AU29_RS15710 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AU29_RS15715 PF04380 Membrane fusogenic activity AU29_RS15720 PF08971 Glycogen synthesis protein AU29_RS15725 PF07290 Protein of unknown function (DUF1449) AU29_RS15730 PF15975 Flotillin AU29_RS15730 PF01145 SPFH domain / Band 7 family AU29_RS15735 PF00294 pfkB family carbohydrate kinase AU29_RS15735 PF01467 Cytidylyltransferase-like AU29_RS15740 PF03710 Glutamate-ammonia ligase adenylyltransferase AU29_RS15740 PF08335 GlnD PII-uridylyltransferase AU29_RS15745 PF01928 CYTH domain AU29_RS15750 PF08239 Bacterial SH3 domain AU29_RS15755 PF01966 HD domain AU29_RS15755 PF01743 Poly A polymerase head domain AU29_RS15755 PF12627 Probable RNA and SrmB- binding site of polymerase A AU29_RS15760 PF02673 Bacitracin resistance protein BacA AU29_RS15765 PF02152 Dihydroneopterin aldolase AU29_RS15770 PF02660 Glycerol-3-phosphate acyltransferase AU29_RS15780 PF00814 Glycoprotease family AU29_RS15785 PF01165 Ribosomal protein S21 AU29_RS15790 PF01807 CHC2 zinc finger AU29_RS15790 PF08275 DNA primase catalytic core, N-terminal domain AU29_RS15790 PF08278 DNA primase DnaG DnaB-binding AU29_RS15790 PF10410 DnaB-helicase binding domain of primase AU29_RS15795 PF04546 Sigma-70, non-essential region AU29_RS15795 PF04542 Sigma-70 region 2 AU29_RS15795 PF00140 Sigma-70 factor, region 1.2 AU29_RS15795 PF04545 Sigma-70, region 4 AU29_RS15795 PF03979 Sigma-70 factor, region 1.1 AU29_RS15795 PF04539 Sigma-70 region 3 AU29_RS15800 PF03167 Uracil DNA glycosylase superfamily AU29_RS15835 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AU29_RS15840 PF08400 Prophage tail fibre N-terminal AU29_RS15840 PF03335 Phage tail fibre repeat AU29_RS15840 PF07484 Phage Tail Collar Domain AU29_RS15940 PF05840 Bacteriophage replication gene A protein (GPA) AU29_RS15945 PF02086 D12 class N6 adenine-specific DNA methyltransferase AU29_RS15970 PF06892 Phage regulatory protein CII (CP76) AU29_RS15980 PF07022 Bacteriophage CI repressor helix-turn-helix domain AU29_RS15980 PF16452 Bacteriophage CI repressor C-terminal domain AU29_RS15990 PF02899 Phage integrase, N-terminal SAM-like domain AU29_RS15990 PF00589 Phage integrase family AU29_RS16000 PF08021 Siderophore-interacting FAD-binding domain AU29_RS16000 PF04954 Siderophore-interacting protein AU29_RS16005 PF03551 Transcriptional regulator PadR-like family AU29_RS16010 PF00672 HAMP domain AU29_RS16010 PF02203 Tar ligand binding domain homologue AU29_RS16010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AU29_RS16015 PF08447 PAS fold AU29_RS16015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AU29_RS16020 PF00202 Aminotransferase class-III AU29_RS16025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS16025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AU29_RS16030 PF05175 Methyltransferase small domain AU29_RS16035 PF01863 Protein of unknown function DUF45 AU29_RS16040 PF02698 DUF218 domain AU29_RS16045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AU29_RS16050 PF03741 Integral membrane protein TerC family AU29_RS16055 PF00375 Sodium:dicarboxylate symporter family AU29_RS16060 PF09335 SNARE associated Golgi protein AU29_RS16065 PF13721 SecD export protein N-terminal TM region AU29_RS16070 PF06476 Protein of unknown function (DUF1090) AU29_RS16075 PF05957 Bacterial protein of unknown function (DUF883) AU29_RS16080 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AU29_RS16085 PF13997 YqjK-like protein AU29_RS16090 PF07681 DoxX AU29_RS16095 PF13409 Glutathione S-transferase, N-terminal domain AU29_RS16100 PF05656 Protein of unknown function (DUF805) AU29_RS16105 PF03466 LysR substrate binding domain AU29_RS16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS16110 PF02678 Pirin AU29_RS16110 PF17954 Quercetinase C-terminal cupin domain AU29_RS16120 PF03313 Serine dehydratase alpha chain AU29_RS16130 PF03315 Serine dehydratase beta chain AU29_RS16130 PF03313 Serine dehydratase alpha chain AU29_RS16135 PF01228 Glycine radical AU29_RS16135 PF02901 Pyruvate formate lyase-like AU29_RS16140 PF00871 Acetokinase family AU29_RS16145 PF03222 Tryptophan/tyrosine permease family AU29_RS16150 PF00291 Pyridoxal-phosphate dependent enzyme AU29_RS16155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS16155 PF03466 LysR substrate binding domain AU29_RS16160 PF02595 Glycerate kinase family AU29_RS16165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AU29_RS16165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AU29_RS16170 PF03328 HpcH/HpaI aldolase/citrate lyase family AU29_RS16175 PF08666 SAF domain AU29_RS16175 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AU29_RS16180 PF01116 Fructose-bisphosphate aldolase class-II AU29_RS16185 PF08013 Tagatose 6 phosphate kinase AU29_RS16190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AU29_RS16195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AU29_RS16200 PF03611 PTS system sugar-specific permease component AU29_RS16205 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS16205 PF00107 Zinc-binding dehydrogenase AU29_RS16210 PF08220 DeoR-like helix-turn-helix domain AU29_RS16215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AU29_RS16220 PF04348 LppC putative lipoprotein AU29_RS16225 PF02021 Uncharacterised protein family UPF0102 AU29_RS16230 PF13580 SIS domain AU29_RS16235 PF04972 BON domain AU29_RS16240 PF13460 NAD(P)H-binding AU29_RS16245 PF01965 DJ-1/PfpI family AU29_RS16255 PF01541 GIY-YIG catalytic domain AU29_RS16260 PF13508 Acetyltransferase (GNAT) domain AU29_RS16265 PF02036 SCP-2 sterol transfer family AU29_RS16270 PF01136 Peptidase family U32 AU29_RS16275 PF01136 Peptidase family U32 AU29_RS16280 PF00296 Luciferase-like monooxygenase AU29_RS16285 PF03734 L,D-transpeptidase catalytic domain AU29_RS16295 PF03222 Tryptophan/tyrosine permease family AU29_RS16300 PF12343 Cold shock protein DEAD box A AU29_RS16300 PF00270 DEAD/DEAH box helicase AU29_RS16300 PF00271 Helicase conserved C-terminal domain AU29_RS16300 PF03880 DbpA RNA binding domain AU29_RS16305 PF13181 Tetratricopeptide repeat AU29_RS16305 PF07719 Tetratricopeptide repeat AU29_RS16310 PF00575 S1 RNA binding domain AU29_RS16310 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AU29_RS16310 PF03725 3' exoribonuclease family, domain 2 AU29_RS16310 PF01138 3' exoribonuclease family, domain 1 AU29_RS16310 PF00013 KH domain AU29_RS16315 PF00312 Ribosomal protein S15 AU29_RS16320 PF01509 TruB family pseudouridylate synthase (N terminal domain) AU29_RS16320 PF09157 Pseudouridine synthase II TruB, C-terminal AU29_RS16320 PF16198 tRNA pseudouridylate synthase B C-terminal domain AU29_RS16325 PF02033 Ribosome-binding factor A AU29_RS16330 PF08364 Bacterial translation initiation factor IF-2 associated region AU29_RS16330 PF00009 Elongation factor Tu GTP binding domain AU29_RS16330 PF11987 Translation-initiation factor 2 AU29_RS16330 PF04760 Translation initiation factor IF-2, N-terminal region AU29_RS16335 PF13184 NusA-like KH domain AU29_RS16335 PF08529 NusA N-terminal domain AU29_RS16340 PF02576 RimP N-terminal domain AU29_RS16340 PF17384 RimP C-terminal SH3 domain AU29_RS16350 PF00764 Arginosuccinate synthase AU29_RS16365 PF03840 Preprotein translocase SecG subunit AU29_RS16370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AU29_RS16370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AU29_RS16370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AU29_RS16370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AU29_RS16375 PF00809 Pterin binding enzyme AU29_RS16380 PF00004 ATPase family associated with various cellular activities (AAA) AU29_RS16380 PF17862 AAA+ lid domain AU29_RS16380 PF01434 Peptidase family M41 AU29_RS16380 PF06480 FtsH Extracellular AU29_RS16385 PF01728 FtsJ-like methyltransferase AU29_RS16390 PF01985 CRS1 / YhbY (CRM) domain AU29_RS16395 PF03449 Transcription elongation factor, N-terminal AU29_RS16395 PF01272 Transcription elongation factor, GreA/GreB, C-term AU29_RS16405 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AU29_RS16410 PF01018 GTP1/OBG AU29_RS16410 PF01926 50S ribosome-binding GTPase AU29_RS16415 PF00892 EamA-like transporter family AU29_RS16420 PF01016 Ribosomal L27 protein AU29_RS16425 PF00829 Ribosomal prokaryotic L21 protein AU29_RS16430 PF00348 Polyprenyl synthetase AU29_RS16435 PF13693 Winged helix-turn-helix DNA-binding AU29_RS16440 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AU29_RS16445 PF01722 BolA-like protein AU29_RS16450 PF13466 STAS domain AU29_RS16455 PF05494 MlaC protein AU29_RS16460 PF02470 MlaD protein AU29_RS16465 PF02405 Permease MlaE AU29_RS16470 PF00005 ABC transporter AU29_RS16475 PF01699 Sodium/calcium exchanger protein AU29_RS16480 PF00571 CBS domain AU29_RS16480 PF01380 SIS domain AU29_RS16490 PF06835 Lipopolysaccharide-assembly, LptC-related AU29_RS16495 PF03968 OstA-like protein AU29_RS16500 PF00005 ABC transporter AU29_RS16500 PF12399 Branched-chain amino acid ATP-binding cassette transporter AU29_RS16505 PF04963 Sigma-54 factor, core binding domain AU29_RS16505 PF00309 Sigma-54 factor, Activator interacting domain (AID) AU29_RS16505 PF04552 Sigma-54, DNA binding domain AU29_RS16510 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AU29_RS16515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AU29_RS16520 PF03668 P-loop ATPase protein family AU29_RS16525 PF00381 PTS HPr component phosphorylation site AU29_RS16530 PF10707 PhoP regulatory network protein YrbL AU29_RS16535 PF00912 Transglycosylase AU29_RS16545 PF00989 PAS fold AU29_RS16545 PF00072 Response regulator receiver domain AU29_RS16545 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS16545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS16545 PF01627 Hpt domain AU29_RS16545 PF18415 Histidine kinase receptor ArcB trans-membrane domain AU29_RS16550 PF16199 Radical_SAM C-terminal domain AU29_RS16550 PF04055 Radical SAM superfamily AU29_RS16560 PF01645 Conserved region in glutamate synthase AU29_RS16560 PF04898 Glutamate synthase central domain AU29_RS16560 PF01493 GXGXG motif AU29_RS16560 PF00310 Glutamine amidotransferases class-II AU29_RS16565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AU29_RS16565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS16570 PF06250 YhcG PDDEXK nuclease domain AU29_RS16570 PF17761 DUF1016 N-terminal domain AU29_RS16575 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AU29_RS16580 PF07969 Amidohydrolase family AU29_RS16585 PF04074 YhcH/YjgK/YiaL AU29_RS16590 PF00480 ROK family AU29_RS16595 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AU29_RS16600 PF07690 Major Facilitator Superfamily AU29_RS16605 PF00701 Dihydrodipicolinate synthetase family AU29_RS16610 PF07729 FCD domain AU29_RS16610 PF00392 Bacterial regulatory proteins, gntR family AU29_RS16615 PF04386 Stringent starvation protein B AU29_RS16620 PF00043 Glutathione S-transferase, C-terminal domain AU29_RS16620 PF02798 Glutathione S-transferase, N-terminal domain AU29_RS16630 PF00380 Ribosomal protein S9/S16 AU29_RS16635 PF00572 Ribosomal protein L13 AU29_RS16640 PF03969 AFG1-like ATPase AU29_RS16645 PF06295 Protein of unknown function (DUF1043) AU29_RS16650 PF00595 PDZ domain AU29_RS16650 PF13180 PDZ domain AU29_RS16655 PF13180 PDZ domain AU29_RS16660 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AU29_RS16665 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AU29_RS16670 PF00364 Biotin-requiring enzyme AU29_RS16670 PF02436 Conserved carboxylase domain AU29_RS16670 PF00682 HMGL-like AU29_RS16675 PF04277 Oxaloacetate decarboxylase, gamma chain AU29_RS16680 PF05683 Fumarase C-terminus AU29_RS16685 PF05681 Fumarate hydratase (Fumerase) AU29_RS16690 PF00939 Sodium:sulfate symporter transmembrane region AU29_RS16700 PF00392 Bacterial regulatory proteins, gntR family AU29_RS16700 PF07702 UTRA domain AU29_RS16705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AU29_RS16705 PF00056 lactate/malate dehydrogenase, NAD binding domain AU29_RS16710 PF02863 Arginine repressor, C-terminal domain AU29_RS16710 PF01316 Arginine repressor, DNA binding domain AU29_RS16715 PF07338 Protein of unknown function (DUF1471) AU29_RS16720 PF07338 Protein of unknown function (DUF1471) AU29_RS16725 PF01337 Barstar (barnase inhibitor) AU29_RS16730 PF04632 Fusaric acid resistance protein family AU29_RS16735 PF13533 Biotin-lipoyl like AU29_RS16740 PF07869 Protein of unknown function (DUF1656) AU29_RS16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS16745 PF03466 LysR substrate binding domain AU29_RS16750 PF01523 Putative modulator of DNA gyrase AU29_RS16755 PF13116 Protein of unknown function AU29_RS16755 PF13502 AsmA-like C-terminal region AU29_RS16760 PF10150 Ribonuclease E/G family AU29_RS16760 PF00575 S1 RNA binding domain AU29_RS16765 PF02545 Maf-like protein AU29_RS16770 PF04093 rod shape-determining protein MreD AU29_RS16775 PF04085 rod shape-determining protein MreC AU29_RS16790 PF00990 Diguanylate cyclase, GGDEF domain AU29_RS16790 PF00563 EAL domain AU29_RS16790 PF17157 Gammaproteobacterial periplasmic sensor domain AU29_RS16795 PF00107 Zinc-binding dehydrogenase AU29_RS16795 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS16800 PF00174 Oxidoreductase molybdopterin binding domain AU29_RS16805 PF01794 Ferric reductase like transmembrane component AU29_RS16810 PF00364 Biotin-requiring enzyme AU29_RS16815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AU29_RS16815 PF00289 Biotin carboxylase, N-terminal domain AU29_RS16815 PF02785 Biotin carboxylase C-terminal domain AU29_RS16820 PF06196 Protein of unknown function (DUF997) AU29_RS16825 PF00474 Sodium:solute symporter family AU29_RS16835 PF01207 Dihydrouridine synthase (Dus) AU29_RS16840 PF02954 Bacterial regulatory protein, Fis family AU29_RS16845 PF01555 DNA methylase AU29_RS16850 PF10831 Protein of unknown function (DUF2556) AU29_RS16855 PF03707 Bacterial signalling protein N terminal repeat AU29_RS16855 PF00563 EAL domain AU29_RS16855 PF00990 Diguanylate cyclase, GGDEF domain AU29_RS16860 PF00440 Bacterial regulatory proteins, tetR family AU29_RS16860 PF08361 MAATS-type transcriptional repressor, C-terminal region AU29_RS16865 PF00529 HlyD membrane-fusion protein of T1SS AU29_RS16865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AU29_RS16870 PF00873 AcrB/AcrD/AcrF family AU29_RS16915 PF00132 Bacterial transferase hexapeptide (six repeats) AU29_RS16920 PF07369 Protein of unknown function (DUF1488) AU29_RS16925 PF08501 Shikimate dehydrogenase substrate binding domain AU29_RS16925 PF01488 Shikimate / quinate 5-dehydrogenase AU29_RS16925 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AU29_RS16930 PF01300 Telomere recombination AU29_RS16935 PF01396 Topoisomerase DNA binding C4 zinc finger AU29_RS16940 PF04361 Protein of unknown function (DUF494) AU29_RS16945 PF17782 DprA winged helix domain AU29_RS16945 PF02481 DNA recombination-mediator protein A AU29_RS16950 PF01327 Polypeptide deformylase AU29_RS16955 PF00551 Formyl transferase AU29_RS16955 PF02911 Formyl transferase, C-terminal domain AU29_RS16960 PF01189 16S rRNA methyltransferase RsmB/F AU29_RS16960 PF01029 NusB family AU29_RS16965 PF02254 TrkA-N domain AU29_RS16965 PF02080 TrkA-C domain AU29_RS16970 PF01741 Large-conductance mechanosensitive channel, MscL AU29_RS16975 PF03889 Alternative ribosome-rescue factor A AU29_RS16980 PF13411 MerR HTH family regulatory protein AU29_RS16985 PF09350 Domain of unknown function (DUF1992) AU29_RS16990 PF01196 Ribosomal protein L17 AU29_RS16995 PF01000 RNA polymerase Rpb3/RpoA insert domain AU29_RS16995 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AU29_RS16995 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AU29_RS17000 PF00163 Ribosomal protein S4/S9 N-terminal domain AU29_RS17000 PF01479 S4 domain AU29_RS17005 PF00411 Ribosomal protein S11 AU29_RS17010 PF00416 Ribosomal protein S13/S18 AU29_RS17015 PF00444 Ribosomal protein L36 AU29_RS17020 PF00344 SecY translocase AU29_RS17025 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AU29_RS17030 PF00327 Ribosomal protein L30p/L7e AU29_RS17035 PF03719 Ribosomal protein S5, C-terminal domain AU29_RS17035 PF00333 Ribosomal protein S5, N-terminal domain AU29_RS17040 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AU29_RS17045 PF00347 Ribosomal protein L6 AU29_RS17050 PF00410 Ribosomal protein S8 AU29_RS17055 PF00253 Ribosomal protein S14p/S29e AU29_RS17060 PF00673 ribosomal L5P family C-terminus AU29_RS17060 PF00281 Ribosomal protein L5 AU29_RS17065 PF00467 KOW motif AU29_RS17065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AU29_RS17070 PF00238 Ribosomal protein L14p/L23e AU29_RS17075 PF00366 Ribosomal protein S17 AU29_RS17080 PF00831 Ribosomal L29 protein AU29_RS17085 PF00252 Ribosomal protein L16p/L10e AU29_RS17090 PF00189 Ribosomal protein S3, C-terminal domain AU29_RS17090 PF07650 KH domain AU29_RS17095 PF00237 Ribosomal protein L22p/L17e AU29_RS17100 PF00203 Ribosomal protein S19 AU29_RS17105 PF03947 Ribosomal Proteins L2, C-terminal domain AU29_RS17105 PF00181 Ribosomal Proteins L2, RNA binding domain AU29_RS17110 PF00276 Ribosomal protein L23 AU29_RS17115 PF00573 Ribosomal protein L4/L1 family AU29_RS17120 PF00297 Ribosomal protein L3 AU29_RS17125 PF00338 Ribosomal protein S10p/S20e AU29_RS17130 PF01478 Type IV leader peptidase family AU29_RS17135 PF00210 Ferritin-like domain AU29_RS17140 PF04324 BFD-like [2Fe-2S] binding domain AU29_RS17145 PF00009 Elongation factor Tu GTP binding domain AU29_RS17145 PF03144 Elongation factor Tu domain 2 AU29_RS17145 PF03143 Elongation factor Tu C-terminal domain AU29_RS17150 PF03144 Elongation factor Tu domain 2 AU29_RS17150 PF00009 Elongation factor Tu GTP binding domain AU29_RS17150 PF14492 Elongation Factor G, domain II AU29_RS17150 PF00679 Elongation factor G C-terminus AU29_RS17150 PF03764 Elongation factor G, domain IV AU29_RS17155 PF00177 Ribosomal protein S7p/S5e AU29_RS17160 PF00164 Ribosomal protein S12/S23 AU29_RS17165 PF04077 DsrH like protein AU29_RS17170 PF02635 DsrE/DsrF-like family AU29_RS17175 PF02635 DsrE/DsrF-like family AU29_RS17180 PF13309 HTH domain AU29_RS17180 PF08348 YheO-like PAS domain AU29_RS17185 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AU29_RS17185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AU29_RS17190 PF04102 SlyX AU29_RS17195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AU29_RS17200 PF09526 Probable metal-binding protein (DUF2387) AU29_RS17205 PF02254 TrkA-N domain AU29_RS17205 PF00999 Sodium/hydrogen exchanger family AU29_RS17210 PF02525 Flavodoxin-like fold AU29_RS17215 PF00005 ABC transporter AU29_RS17215 PF12848 ABC transporter AU29_RS17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS17220 PF03466 LysR substrate binding domain AU29_RS17225 PF08803 Putative mono-oxygenase ydhR AU29_RS17230 PF00561 alpha/beta hydrolase fold AU29_RS17235 PF06794 Uncharacterised protein family (UPF0270) AU29_RS17240 PF00485 Phosphoribulokinase / Uridine kinase family AU29_RS17245 PF02566 OsmC-like protein AU29_RS17250 PF13545 Crp-like helix-turn-helix domain AU29_RS17250 PF00027 Cyclic nucleotide-binding domain AU29_RS17255 PF12805 FUSC-like inner membrane protein yccS AU29_RS17260 PF00202 Aminotransferase class-III AU29_RS17265 PF00117 Glutamine amidotransferase class-I AU29_RS17270 PF02661 Fic/DOC family AU29_RS17275 PF10832 Protein of unknown function (DUF2559) AU29_RS17280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AU29_RS17285 PF07690 Major Facilitator Superfamily AU29_RS17290 PF04324 BFD-like [2Fe-2S] binding domain AU29_RS17290 PF18267 Rubredoxin NAD+ reductase C-terminal domain AU29_RS17290 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS17290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AU29_RS17290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AU29_RS17295 PF13806 Rieske-like [2Fe-2S] domain AU29_RS17300 PF01226 Formate/nitrite transporter AU29_RS17305 PF14824 Sirohaem biosynthesis protein central AU29_RS17305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AU29_RS17305 PF10414 Sirohaem synthase dimerisation region AU29_RS17315 PF13978 Protein of unknown function (DUF4223) AU29_RS17320 PF00579 tRNA synthetases class I (W and Y) AU29_RS17325 PF13419 Haloacid dehalogenase-like hydrolase AU29_RS17330 PF00834 Ribulose-phosphate 3 epimerase family AU29_RS17335 PF02086 D12 class N6 adenine-specific DNA methyltransferase AU29_RS17340 PF05036 Sporulation related domain AU29_RS17345 PF01761 3-dehydroquinate synthase AU29_RS17350 PF01202 Shikimate kinase AU29_RS17355 PF03958 Bacterial type II/III secretion system short domain AU29_RS17355 PF00263 Bacterial type II and III secretion system protein AU29_RS17360 PF10748 DNA utilization proteins HofP AU29_RS17370 PF05137 Fimbrial assembly protein (PilN) AU29_RS17380 PF17092 Penicillin-binding protein OB-like domain AU29_RS17380 PF00912 Transglycosylase AU29_RS17380 PF00905 Penicillin binding protein transpeptidase domain AU29_RS17385 PF00293 NUDIX domain AU29_RS17390 PF07095 Intracellular growth attenuator protein IgaA AU29_RS17395 PF13419 Haloacid dehalogenase-like hydrolase AU29_RS17400 PF01479 S4 domain AU29_RS17405 PF01430 Hsp33 protein AU29_RS17410 PF13687 Domain of unknown function (DUF4153) AU29_RS17415 PF01293 Phosphoenolpyruvate carboxykinase AU29_RS17420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS17420 PF00672 HAMP domain AU29_RS17420 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS17425 PF00072 Response regulator receiver domain AU29_RS17425 PF00486 Transcriptional regulatory protein, C terminal AU29_RS17430 PF01272 Transcription elongation factor, GreA/GreB, C-term AU29_RS17430 PF03449 Transcription elongation factor, N-terminal AU29_RS17435 PF17674 HHH domain AU29_RS17435 PF09371 Tex-like protein N-terminal domain AU29_RS17435 PF16921 Tex protein YqgF-like domain AU29_RS17435 PF00575 S1 RNA binding domain AU29_RS17440 PF04023 FeoA domain AU29_RS17445 PF02421 Ferrous iron transport protein B AU29_RS17445 PF07664 Ferrous iron transport protein B C terminus AU29_RS17445 PF17910 FeoB cytosolic helical domain AU29_RS17445 PF07670 Nucleoside recognition AU29_RS17450 PF09012 FeoC like transcriptional regulator AU29_RS17455 PF04754 Putative transposase, YhgA-like AU29_RS17460 PF00561 alpha/beta hydrolase fold AU29_RS17465 PF00156 Phosphoribosyl transferase domain AU29_RS17470 PF01106 NifU-like domain AU29_RS17470 PF01521 Iron-sulphur cluster biosynthesis AU29_RS17475 PF02447 GntP family permease AU29_RS17480 PF02446 4-alpha-glucanotransferase AU29_RS17485 PF00343 Carbohydrate phosphorylase AU29_RS17490 PF17874 MalT-like TPR region AU29_RS17490 PF00196 Bacterial regulatory proteins, luxR family AU29_RS17495 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AU29_RS17500 PF04221 RelB antitoxin AU29_RS17505 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AU29_RS17505 PF01137 RNA 3'-terminal phosphate cyclase AU29_RS17510 PF01139 tRNA-splicing ligase RtcB AU29_RS17520 PF00158 Sigma-54 interaction domain AU29_RS17520 PF06956 Regulator of RNA terminal phosphate cyclase AU29_RS17525 PF08220 DeoR-like helix-turn-helix domain AU29_RS17525 PF00455 DeoR C terminal sensor domain AU29_RS17530 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AU29_RS17530 PF01694 Rhomboid family AU29_RS17535 PF00581 Rhodanese-like domain AU29_RS17540 PF01266 FAD dependent oxidoreductase AU29_RS17540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AU29_RS17555 PF00465 Iron-containing alcohol dehydrogenase AU29_RS17560 PF07690 Major Facilitator Superfamily AU29_RS17565 PF00920 Dehydratase family AU29_RS17570 PF00701 Dihydrodipicolinate synthetase family AU29_RS17575 PF09339 IclR helix-turn-helix domain AU29_RS17575 PF01614 Bacterial transcriptional regulator AU29_RS17580 PF00343 Carbohydrate phosphorylase AU29_RS17585 PF00534 Glycosyl transferases group 1 AU29_RS17585 PF08323 Starch synthase catalytic domain AU29_RS17590 PF00483 Nucleotidyl transferase AU29_RS17595 PF18390 Glycogen debranching enzyme C-terminal domain AU29_RS17595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AU29_RS17595 PF00128 Alpha amylase, catalytic domain AU29_RS17600 PF00128 Alpha amylase, catalytic domain AU29_RS17600 PF02806 Alpha amylase, C-terminal all-beta domain AU29_RS17600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AU29_RS17605 PF02774 Semialdehyde dehydrogenase, dimerisation domain AU29_RS17605 PF01118 Semialdehyde dehydrogenase, NAD binding domain AU29_RS17610 PF02447 GntP family permease AU29_RS17615 PF01202 Shikimate kinase AU29_RS17620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AU29_RS17620 PF00356 Bacterial regulatory proteins, lacI family AU29_RS17625 PF02678 Pirin AU29_RS17625 PF17954 Quercetinase C-terminal cupin domain AU29_RS17630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AU29_RS17630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AU29_RS17635 PF00583 Acetyltransferase (GNAT) family AU29_RS17640 PF00294 pfkB family carbohydrate kinase AU29_RS17655 PF02126 Phosphotriesterase family AU29_RS17665 PF10956 Protein of unknown function (DUF2756) AU29_RS17670 PF03009 Glycerophosphoryl diester phosphodiesterase family AU29_RS17675 PF00005 ABC transporter AU29_RS17675 PF17912 MalK OB fold domain AU29_RS17680 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS17685 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS17690 PF13416 Bacterial extracellular solute-binding protein AU29_RS17700 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AU29_RS17705 PF00005 ABC transporter AU29_RS17710 PF00005 ABC transporter AU29_RS17710 PF12399 Branched-chain amino acid ATP-binding cassette transporter AU29_RS17715 PF11862 Domain of unknown function (DUF3382) AU29_RS17715 PF02653 Branched-chain amino acid transport system / permease component AU29_RS17720 PF02653 Branched-chain amino acid transport system / permease component AU29_RS17725 PF13458 Periplasmic binding protein AU29_RS17730 PF12568 Acetyltransferase (GNAT) domain, PanZ AU29_RS17740 PF13458 Periplasmic binding protein AU29_RS17745 PF04542 Sigma-70 region 2 AU29_RS17745 PF04545 Sigma-70, region 4 AU29_RS17750 PF02687 FtsX-like permease family AU29_RS17750 PF18075 FtsX extracellular domain AU29_RS17755 PF00005 ABC transporter AU29_RS17760 PF02881 SRP54-type protein, helical bundle domain AU29_RS17760 PF00448 SRP54-type protein, GTPase domain AU29_RS17770 PF06611 Protein of unknown function (DUF1145) AU29_RS17775 PF10694 Protein of unknown function (DUF2500) AU29_RS17780 PF07947 YhhN family AU29_RS17785 PF00403 Heavy-metal-associated domain AU29_RS17790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AU29_RS17790 PF02203 Tar ligand binding domain homologue AU29_RS17790 PF00672 HAMP domain AU29_RS17795 PF01206 Sulfurtransferase TusA AU29_RS17800 PF02592 Putative vitamin uptake transporter AU29_RS17805 PF08786 DcrB AU29_RS17810 PF07690 Major Facilitator Superfamily AU29_RS17815 PF01594 AI-2E family transporter AU29_RS17820 PF01648 4'-phosphopantetheinyl transferase superfamily AU29_RS17825 PF01402 Ribbon-helix-helix protein, copG family AU29_RS17825 PF08753 NikR C terminal nickel binding domain AU29_RS17835 PF00005 ABC transporter AU29_RS17840 PF13533 Biotin-lipoyl like AU29_RS17850 PF01384 Phosphate transporter family AU29_RS17855 PF10625 Universal stress protein B (UspB) AU29_RS17860 PF00582 Universal stress protein family AU29_RS17865 PF00854 POT family AU29_RS17870 PF04445 Putative SAM-dependent methyltransferase AU29_RS17875 PF01432 Peptidase family M3 AU29_RS17880 PF01569 PAP2 superfamily AU29_RS17885 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AU29_RS17890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AU29_RS17890 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS17895 PF00710 Asparaginase, N-terminal AU29_RS17895 PF17763 Glutaminase/Asparaginase C-terminal domain AU29_RS17900 PF03605 Anaerobic c4-dicarboxylate membrane transporter AU29_RS17905 PF00294 pfkB family carbohydrate kinase AU29_RS17910 PF01380 SIS domain AU29_RS17915 PF07702 UTRA domain AU29_RS17915 PF00392 Bacterial regulatory proteins, gntR family AU29_RS17920 PF01204 Trehalase AU29_RS17935 PF00196 Bacterial regulatory proteins, luxR family AU29_RS17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS17940 PF03466 LysR substrate binding domain AU29_RS17945 PF03631 Virulence factor BrkB AU29_RS17950 PF00083 Sugar (and other) transporter AU29_RS17950 PF07690 Major Facilitator Superfamily AU29_RS17955 PF05170 AsmA family AU29_RS17960 PF00563 EAL domain AU29_RS17965 PF00294 pfkB family carbohydrate kinase AU29_RS17970 PF00675 Insulinase (Peptidase family M16) AU29_RS17970 PF05193 Peptidase M16 inactive domain AU29_RS17975 PF00375 Sodium:dicarboxylate symporter family AU29_RS17980 PF00990 Diguanylate cyclase, GGDEF domain AU29_RS17980 PF00672 HAMP domain AU29_RS17980 PF17154 Gammaproteobacterial periplasmic sensor domain AU29_RS17980 PF00563 EAL domain AU29_RS17985 PF13176 Tetratricopeptide repeat AU29_RS17985 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AU29_RS17990 PF01270 Glycosyl hydrolases family 8 AU29_RS17995 PF03170 Bacterial cellulose synthase subunit AU29_RS18000 PF00535 Glycosyl transferase family 2 AU29_RS18000 PF07238 PilZ domain AU29_RS18005 PF06564 Cellulose biosynthesis protein BcsQ AU29_RS18010 PF10945 Cellulose biosynthesis protein BcsR AU29_RS18015 PF10995 Cellulose biosynthesis GIL AU29_RS18020 PF11120 Cellulose biosynthesis protein BcsF AU29_RS18025 PF11658 Cellulose biosynthesis protein BcsG AU29_RS18030 PF13940 Toxin Ldr, type I toxin-antitoxin system AU29_RS18035 PF01053 Cys/Met metabolism PLP-dependent enzyme AU29_RS18040 PF03222 Tryptophan/tyrosine permease family AU29_RS18045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AU29_RS18045 PF00005 ABC transporter AU29_RS18050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AU29_RS18050 PF00005 ABC transporter AU29_RS18055 PF12911 N-terminal TM domain of oligopeptide transport permease C AU29_RS18055 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS18060 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS18065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AU29_RS18070 PF00860 Permease family AU29_RS18080 PF00356 Bacterial regulatory proteins, lacI family AU29_RS18100 PF08019 Phosphoethanolamine transferase EptA/EptB AU29_RS18100 PF00884 Sulfatase AU29_RS18105 PF00419 Fimbrial protein AU29_RS18110 PF00419 Fimbrial protein AU29_RS18115 PF13954 PapC N-terminal domain AU29_RS18115 PF13953 PapC C-terminal domain AU29_RS18115 PF00577 Outer membrane usher protein AU29_RS18120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS18120 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS18125 PF00419 Fimbrial protein AU29_RS18130 PF03797 Autotransporter beta-domain AU29_RS18135 PF03352 Methyladenine glycosylase AU29_RS18140 PF00583 Acetyltransferase (GNAT) family AU29_RS18145 PF18364 Molybdopterin oxidoreductase N-terminal domain AU29_RS18145 PF00384 Molybdopterin oxidoreductase AU29_RS18145 PF01568 Molydopterin dinucleotide binding domain AU29_RS18150 PF13488 Glycine zipper AU29_RS18150 PF00691 OmpA family AU29_RS18155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AU29_RS18155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AU29_RS18160 PF11254 Protein of unknown function (DUF3053) AU29_RS18165 PF01381 Helix-turn-helix AU29_RS18170 PF00313 'Cold-shock' DNA-binding domain AU29_RS18195 PF13276 HTH-like domain AU29_RS18195 PF00665 Integrase core domain AU29_RS18195 PF13333 Integrase core domain AU29_RS18200 PF02092 Glycyl-tRNA synthetase beta subunit AU29_RS18200 PF05746 DALR anticodon binding domain AU29_RS18205 PF02091 Glycyl-tRNA synthetase alpha subunit AU29_RS18210 PF13983 YsaB-like lipoprotein AU29_RS18215 PF01757 Acyltransferase family AU29_RS18220 PF05360 yiaA/B two helix domain AU29_RS18225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AU29_RS18225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AU29_RS18235 PF12833 Helix-turn-helix domain AU29_RS18240 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AU29_RS18250 PF00128 Alpha amylase, catalytic domain AU29_RS18255 PF00155 Aminotransferase class I and II AU29_RS18260 PF13247 4Fe-4S dicluster domain AU29_RS18265 PF01614 Bacterial transcriptional regulator AU29_RS18265 PF09339 IclR helix-turn-helix domain AU29_RS18270 PF02615 Malate/L-lactate dehydrogenase AU29_RS18275 PF04074 YhcH/YjgK/YiaL AU29_RS18280 PF16154 Domain of unknown function (DUF4862) AU29_RS18285 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AU29_RS18290 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AU29_RS18295 PF03480 Bacterial extracellular solute-binding protein, family 7 AU29_RS18300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AU29_RS18300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AU29_RS18305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AU29_RS18310 PF01261 Xylose isomerase-like TIM barrel AU29_RS18315 PF00596 Class II Aldolase and Adducin N-terminal domain AU29_RS18325 PF07944 Beta-L-arabinofuranosidase, GH127 AU29_RS18330 PF00171 Aldehyde dehydrogenase family AU29_RS18335 PF00480 ROK family AU29_RS18340 PF00009 Elongation factor Tu GTP binding domain AU29_RS18340 PF03144 Elongation factor Tu domain 2 AU29_RS18340 PF09106 Elongation factor SelB, winged helix AU29_RS18340 PF09107 Elongation factor SelB, winged helix AU29_RS18345 PF03841 L-seryl-tRNA selenium transferase AU29_RS18345 PF12390 Selenocysteine synthase N terminal AU29_RS18350 PF13417 Glutathione S-transferase, N-terminal domain AU29_RS18350 PF00043 Glutathione S-transferase, C-terminal domain AU29_RS18355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AU29_RS18355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AU29_RS18355 PF02378 Phosphotransferase system, EIIC AU29_RS18360 PF01232 Mannitol dehydrogenase Rossmann domain AU29_RS18360 PF08125 Mannitol dehydrogenase C-terminal domain AU29_RS18365 PF05068 Mannitol repressor AU29_RS18375 PF10928 Protein of unknown function (DUF2810) AU29_RS18380 PF11622 Protein of unknown function (DUF3251) AU29_RS18385 PF13018 Extended Signal Peptide of Type V secretion system AU29_RS18385 PF03895 YadA-like membrane anchor domain AU29_RS18385 PF05658 Head domain of trimeric autotransporter adhesin AU29_RS18385 PF05662 Coiled stalk of trimeric autotransporter adhesin AU29_RS18390 PF02652 L-lactate permease AU29_RS18395 PF00392 Bacterial regulatory proteins, gntR family AU29_RS18395 PF07729 FCD domain AU29_RS18400 PF01070 FMN-dependent dehydrogenase AU29_RS18405 PF00588 SpoU rRNA Methylase family AU29_RS18410 PF00356 Bacterial regulatory proteins, lacI family AU29_RS18415 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AU29_RS18415 PF13378 Enolase C-terminal domain-like AU29_RS18420 PF07690 Major Facilitator Superfamily AU29_RS18425 PF06426 Serine acetyltransferase, N-terminal AU29_RS18425 PF00132 Bacterial transferase hexapeptide (six repeats) AU29_RS18430 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AU29_RS18430 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AU29_RS18435 PF02556 Preprotein translocase subunit SecB AU29_RS18440 PF00462 Glutaredoxin AU29_RS18445 PF00581 Rhodanese-like domain AU29_RS18450 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AU29_RS18450 PF01676 Metalloenzyme superfamily AU29_RS18455 PF01551 Peptidase family M23 AU29_RS18460 PF04748 Divergent polysaccharide deacetylase AU29_RS18465 PF00535 Glycosyl transferase family 2 AU29_RS18470 PF00107 Zinc-binding dehydrogenase AU29_RS18470 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS18475 PF00155 Aminotransferase class I and II AU29_RS18480 PF01370 NAD dependent epimerase/dehydratase family AU29_RS18485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AU29_RS18490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AU29_RS18495 PF04932 O-Antigen ligase AU29_RS18500 PF00534 Glycosyl transferases group 1 AU29_RS18510 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) AU29_RS18515 PF01501 Glycosyl transferase family 8 AU29_RS18515 PF08437 Glycosyl transferase family 8 C-terminal AU29_RS18520 PF01501 Glycosyl transferase family 8 AU29_RS18520 PF08437 Glycosyl transferase family 8 C-terminal AU29_RS18525 PF13439 Glycosyltransferase Family 4 AU29_RS18525 PF00534 Glycosyl transferases group 1 AU29_RS18540 PF13439 Glycosyltransferase Family 4 AU29_RS18540 PF00534 Glycosyl transferases group 1 AU29_RS18545 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AU29_RS18550 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AU29_RS18555 PF01467 Cytidylyltransferase-like AU29_RS18560 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AU29_RS18560 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AU29_RS18560 PF06827 Zinc finger found in FPG and IleRS AU29_RS18565 PF00471 Ribosomal protein L33 AU29_RS18570 PF00830 Ribosomal L28 family AU29_RS18575 PF04002 RadC-like JAB domain AU29_RS18580 PF04127 DNA / pantothenate metabolism flavoprotein AU29_RS18580 PF02441 Flavoprotein AU29_RS18585 PF00692 dUTPase AU29_RS18590 PF00440 Bacterial regulatory proteins, tetR family AU29_RS18595 PF00156 Phosphoribosyl transferase domain AU29_RS18600 PF01138 3' exoribonuclease family, domain 1 AU29_RS18600 PF03725 3' exoribonuclease family, domain 2 AU29_RS18605 PF03755 YicC-like family, N-terminal region AU29_RS18605 PF08340 Domain of unknown function (DUF1732) AU29_RS18610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS18610 PF03466 LysR substrate binding domain AU29_RS18620 PF03458 UPF0126 domain AU29_RS18625 PF01653 NAD-dependent DNA ligase adenylation domain AU29_RS18625 PF03120 NAD-dependent DNA ligase OB-fold domain AU29_RS18630 PF00625 Guanylate kinase AU29_RS18635 PF01192 RNA polymerase Rpb6 AU29_RS18640 PF13291 ACT domain AU29_RS18640 PF04607 Region found in RelA / SpoT proteins AU29_RS18640 PF02824 TGS domain AU29_RS18645 PF00588 SpoU rRNA Methylase family AU29_RS18645 PF12105 SpoU, rRNA methylase, C-terminal AU29_RS18650 PF17191 RecG wedge domain AU29_RS18650 PF00271 Helicase conserved C-terminal domain AU29_RS18650 PF00270 DEAD/DEAH box helicase AU29_RS18655 PF03616 Sodium/glutamate symporter AU29_RS18660 PF00860 Permease family AU29_RS18665 PF05170 AsmA family AU29_RS18670 PF01055 Glycosyl hydrolases family 31 AU29_RS18670 PF13802 Galactose mutarotase-like AU29_RS18705 PF00196 Bacterial regulatory proteins, luxR family AU29_RS18710 PF03797 Autotransporter beta-domain AU29_RS18720 PF00486 Transcriptional regulatory protein, C terminal AU29_RS18725 PF00857 Isochorismatase family AU29_RS18735 PF00690 Cation transporter/ATPase, N-terminus AU29_RS18735 PF00689 Cation transporting ATPase, C-terminus AU29_RS18740 PF02308 MgtC family AU29_RS18745 PF00892 EamA-like transporter family AU29_RS18750 PF04754 Putative transposase, YhgA-like AU29_RS18755 PF07071 KDGP aldolase AU29_RS18760 PF03841 L-seryl-tRNA selenium transferase AU29_RS18765 PF03613 PTS system mannose/fructose/sorbose family IID component AU29_RS18770 PF03609 PTS system sorbose-specific iic component AU29_RS18775 PF03830 PTS system sorbose subfamily IIB component AU29_RS18775 PF03610 PTS system fructose IIA component AU29_RS18785 PF00874 PRD domain AU29_RS18785 PF00158 Sigma-54 interaction domain AU29_RS18795 PF00232 Glycosyl hydrolase family 1 AU29_RS18800 PF07690 Major Facilitator Superfamily AU29_RS18815 PF06711 Protein of unknown function (DUF1198) AU29_RS18820 PF07690 Major Facilitator Superfamily AU29_RS18825 PF07690 Major Facilitator Superfamily AU29_RS18830 PF07730 Histidine kinase AU29_RS18830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS18830 PF05231 MASE1 AU29_RS18835 PF00196 Bacterial regulatory proteins, luxR family AU29_RS18835 PF00072 Response regulator receiver domain AU29_RS18845 PF07690 Major Facilitator Superfamily AU29_RS18850 PF00294 pfkB family carbohydrate kinase AU29_RS18855 PF08220 DeoR-like helix-turn-helix domain AU29_RS18855 PF00455 DeoR C terminal sensor domain AU29_RS18860 PF01842 ACT domain AU29_RS18865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AU29_RS18865 PF00205 Thiamine pyrophosphate enzyme, central domain AU29_RS18865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AU29_RS18870 PF08049 IlvB leader peptide AU29_RS18875 PF13939 Toxin TisB, type I toxin-antitoxin system AU29_RS18885 PF07690 Major Facilitator Superfamily AU29_RS18895 PF03466 LysR substrate binding domain AU29_RS18895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS18900 PF02447 GntP family permease AU29_RS18905 PF00291 Pyridoxal-phosphate dependent enzyme AU29_RS18915 PF02656 Domain of unknown function (DUF202) AU29_RS18920 PF02656 Domain of unknown function (DUF202) AU29_RS18925 PF06826 Predicted Permease Membrane Region AU29_RS18925 PF02080 TrkA-C domain AU29_RS18930 PF00011 Hsp20/alpha crystallin family AU29_RS18935 PF00011 Hsp20/alpha crystallin family AU29_RS18940 PF07119 Protein of unknown function (DUF1375) AU29_RS18945 PF12566 Protein of unknown function (DUF3748) AU29_RS18945 PF07676 WD40-like Beta Propeller Repeat AU29_RS18950 PF03918 Cytochrome C biogenesis protein AU29_RS18955 PF08534 Redoxin AU29_RS18960 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AU29_RS18960 PF01578 Cytochrome C assembly protein AU29_RS18965 PF03100 CcmE AU29_RS18970 PF04995 Heme exporter protein D (CcmD) AU29_RS18975 PF01578 Cytochrome C assembly protein AU29_RS18980 PF03379 CcmB protein AU29_RS18985 PF00005 ABC transporter AU29_RS18990 PF03150 Di-haem cytochrome c peroxidase AU29_RS18990 PF14376 Haem-binding domain AU29_RS18990 PF00034 Cytochrome c AU29_RS18995 PF02613 Nitrate reductase delta subunit AU29_RS19000 PF18364 Molybdopterin oxidoreductase N-terminal domain AU29_RS19000 PF00384 Molybdopterin oxidoreductase AU29_RS19000 PF01568 Molydopterin dinucleotide binding domain AU29_RS19005 PF03264 NapC/NirT cytochrome c family, N-terminal region AU29_RS19010 PF00486 Transcriptional regulatory protein, C terminal AU29_RS19010 PF00072 Response regulator receiver domain AU29_RS19015 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AU29_RS19020 PF00672 HAMP domain AU29_RS19020 PF01627 Hpt domain AU29_RS19020 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS19020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS19020 PF00072 Response regulator receiver domain AU29_RS19025 PF07690 Major Facilitator Superfamily AU29_RS19030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AU29_RS19030 PF13378 Enolase C-terminal domain-like AU29_RS19035 PF01081 KDPG and KHG aldolase AU29_RS19040 PF05035 2-keto-3-deoxy-galactonokinase AU29_RS19045 PF00392 Bacterial regulatory proteins, gntR family AU29_RS19045 PF07729 FCD domain AU29_RS19055 PF07690 Major Facilitator Superfamily AU29_RS19060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AU29_RS19060 PF13378 Enolase C-terminal domain-like AU29_RS19065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS19065 PF03466 LysR substrate binding domain AU29_RS19070 PF00204 DNA gyrase B AU29_RS19070 PF00986 DNA gyrase B subunit, carboxyl terminus AU29_RS19070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS19070 PF01751 Toprim domain AU29_RS19070 PF18053 DNA gyrase B subunit insert domain AU29_RS19075 PF02463 RecF/RecN/SMC N terminal domain AU29_RS19080 PF02768 DNA polymerase III beta subunit, C-terminal domain AU29_RS19080 PF00712 DNA polymerase III beta subunit, N-terminal domain AU29_RS19080 PF02767 DNA polymerase III beta subunit, central domain AU29_RS19085 PF08299 Bacterial dnaA protein helix-turn-helix AU29_RS19085 PF11638 DnaA N-terminal domain AU29_RS19085 PF00308 Bacterial dnaA protein AU29_RS19090 PF00468 Ribosomal protein L34 AU29_RS19095 PF00825 Ribonuclease P AU29_RS19100 PF01809 Putative membrane protein insertion efficiency factor AU29_RS19105 PF14849 YidC periplasmic domain AU29_RS19105 PF02096 60Kd inner membrane protein AU29_RS19110 PF10396 GTP-binding protein TrmE N-terminus AU29_RS19110 PF01926 50S ribosome-binding GTPase AU29_RS19110 PF12631 MnmE helical domain AU29_RS19115 PF07690 Major Facilitator Superfamily AU29_RS19120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS19120 PF03466 LysR substrate binding domain AU29_RS19130 PF03358 NADPH-dependent FMN reductase AU29_RS19135 PF00860 Permease family AU29_RS19140 PF13419 Haloacid dehalogenase-like hydrolase AU29_RS19145 PF01895 PhoU domain AU29_RS19150 PF00005 ABC transporter AU29_RS19155 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS19160 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS19165 PF12849 PBP superfamily domain AU29_RS19170 PF02378 Phosphotransferase system, EIIC AU29_RS19170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AU29_RS19175 PF08501 Shikimate dehydrogenase substrate binding domain AU29_RS19180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AU29_RS19180 PF12793 Sugar transport-related sRNA regulator N-term AU29_RS19185 PF01380 SIS domain AU29_RS19190 PF12804 MobA-like NTP transferase domain AU29_RS19190 PF00132 Bacterial transferase hexapeptide (six repeats) AU29_RS19200 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AU29_RS19200 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AU29_RS19205 PF02874 ATP synthase alpha/beta family, beta-barrel domain AU29_RS19205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AU29_RS19210 PF00231 ATP synthase AU29_RS19215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AU29_RS19215 PF00306 ATP synthase alpha/beta chain, C terminal domain AU29_RS19215 PF02874 ATP synthase alpha/beta family, beta-barrel domain AU29_RS19220 PF00213 ATP synthase delta (OSCP) subunit AU29_RS19225 PF00430 ATP synthase B/B' CF(0) AU29_RS19230 PF00137 ATP synthase subunit C AU29_RS19235 PF00119 ATP synthase A chain AU29_RS19240 PF03899 ATP synthase I chain AU29_RS19245 PF02527 rRNA small subunit methyltransferase G AU29_RS19250 PF13932 GidA associated domain AU29_RS19250 PF01134 Glucose inhibited division protein A AU29_RS19255 PF00258 Flavodoxin AU29_RS19260 PF01037 Lrp/AsnC ligand binding domain AU29_RS19265 PF03590 Aspartate-ammonia ligase AU29_RS19270 PF05762 VWA domain containing CoxE-like protein AU29_RS19275 PF07728 AAA domain (dynein-related subfamily) AU29_RS19275 PF17868 AAA lid domain AU29_RS19275 PF12592 Protein of unknown function (DUF3763) AU29_RS19280 PF02705 K+ potassium transporter AU29_RS19285 PF05025 RbsD / FucU transport protein family AU29_RS19290 PF00005 ABC transporter AU29_RS19295 PF02653 Branched-chain amino acid transport system / permease component AU29_RS19300 PF13407 Periplasmic binding protein domain AU29_RS19305 PF00294 pfkB family carbohydrate kinase AU29_RS19310 PF00356 Bacterial regulatory proteins, lacI family AU29_RS19320 PF00392 Bacterial regulatory proteins, gntR family AU29_RS19320 PF07729 FCD domain AU29_RS19355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS19355 PF03466 LysR substrate binding domain AU29_RS19360 PF04219 Protein of unknown function, DUF AU29_RS19365 PF01078 Magnesium chelatase, subunit ChlI AU29_RS19365 PF13335 Magnesium chelatase, subunit ChlI C-terminal AU29_RS19370 PF08046 IlvGEDA operon leader peptide AU29_RS19375 PF00205 Thiamine pyrophosphate enzyme, central domain AU29_RS19375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AU29_RS19375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AU29_RS19385 PF01063 Amino-transferase class IV AU29_RS19390 PF00920 Dehydratase family AU29_RS19395 PF00585 C-terminal regulatory domain of Threonine dehydratase AU29_RS19395 PF00291 Pyridoxal-phosphate dependent enzyme AU29_RS19410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS19410 PF03466 LysR substrate binding domain AU29_RS19415 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AU29_RS19415 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AU29_RS19430 PF13361 UvrD-like helicase C-terminal domain AU29_RS19430 PF00580 UvrD/REP helicase N-terminal domain AU29_RS19435 PF02541 Ppx/GppA phosphatase family AU29_RS19440 PF00270 DEAD/DEAH box helicase AU29_RS19440 PF00271 Helicase conserved C-terminal domain AU29_RS19445 PF00085 Thioredoxin AU29_RS19450 PF07498 Rho termination factor, N-terminal domain AU29_RS19450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AU29_RS19450 PF07497 Rho termination factor, RNA-binding domain AU29_RS19455 PF00953 Glycosyl transferase family 4 AU29_RS19460 PF02706 Chain length determinant protein AU29_RS19465 PF02350 UDP-N-acetylglucosamine 2-epimerase AU29_RS19470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AU29_RS19470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AU29_RS19470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AU29_RS19475 PF16363 GDP-mannose 4,6 dehydratase AU29_RS19480 PF00483 Nucleotidyl transferase AU29_RS19480 PF00483 Nucleotidyl transferase AU29_RS19490 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AU29_RS19495 PF01943 Polysaccharide biosynthesis protein AU29_RS19500 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AU29_RS19505 PF06899 WzyE protein, O-antigen assembly polymerase AU29_RS19510 PF03808 Glycosyl transferase WecB/TagA/CpsF family AU29_RS19515 PF00324 Amino acid permease AU29_RS19540 PF07219 HemY protein N-terminus AU29_RS19540 PF07719 Tetratricopeptide repeat AU29_RS19545 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AU29_RS19550 PF02602 Uroporphyrinogen-III synthase HemD AU29_RS19555 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AU29_RS19555 PF03900 Porphobilinogen deaminase, C-terminal domain AU29_RS19560 PF12633 Adenylate cyclase NT domain AU29_RS19560 PF01295 Adenylate cyclase, class-I AU29_RS19565 PF01491 Frataxin-like domain AU29_RS19580 PF13627 Prokaryotic lipoprotein-attachment site AU29_RS19585 PF01678 Diaminopimelate epimerase AU29_RS19590 PF04340 Protein of unknown function, DUF484 AU29_RS19595 PF02899 Phage integrase, N-terminal SAM-like domain AU29_RS19595 PF00589 Phage integrase family AU29_RS19600 PF13419 Haloacid dehalogenase-like hydrolase AU29_RS19605 PF13361 UvrD-like helicase C-terminal domain AU29_RS19605 PF00580 UvrD/REP helicase N-terminal domain AU29_RS19610 PF01544 CorA-like Mg2+ transporter protein AU29_RS19625 PF00892 EamA-like transporter family AU29_RS19630 PF03061 Thioesterase superfamily AU29_RS19635 PF02253 Phospholipase A1 AU29_RS19640 PF00570 HRDC domain AU29_RS19640 PF00270 DEAD/DEAH box helicase AU29_RS19640 PF09382 RQC domain AU29_RS19640 PF00271 Helicase conserved C-terminal domain AU29_RS19640 PF16124 RecQ zinc-binding AU29_RS19645 PF01810 LysE type translocator AU29_RS19650 PF01810 LysE type translocator AU29_RS19655 PF12146 Serine aminopeptidase, S33 AU29_RS19665 PF00892 EamA-like transporter family AU29_RS19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS19670 PF03466 LysR substrate binding domain AU29_RS19675 PF08267 Cobalamin-independent synthase, N-terminal domain AU29_RS19675 PF01717 Cobalamin-independent synthase, Catalytic domain AU29_RS19680 PF04055 Radical SAM superfamily AU29_RS19680 PF13186 Iron-sulfur cluster-binding domain AU29_RS19685 PF01738 Dienelactone hydrolase family AU29_RS19690 PF01048 Phosphorylase superfamily AU29_RS19695 PF02646 RmuC family AU29_RS19700 PF01209 ubiE/COQ5 methyltransferase family AU29_RS19705 PF02036 SCP-2 sterol transfer family AU29_RS19710 PF03109 ABC1 family AU29_RS19715 PF02416 mttA/Hcf106 family AU29_RS19725 PF00902 Sec-independent protein translocase protein (TatC) AU29_RS19730 PF01026 TatD related DNase AU29_RS19735 PF02357 Transcription termination factor nusG AU29_RS19740 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AU29_RS19745 PF00175 Oxidoreductase NAD-binding domain AU29_RS19745 PF00970 Oxidoreductase FAD-binding domain AU29_RS19750 PF17425 Arylsulfotransferase Ig-like domain AU29_RS19750 PF05935 Arylsulfotransferase (ASST) AU29_RS19755 PF00108 Thiolase, N-terminal domain AU29_RS19755 PF02803 Thiolase, C-terminal domain AU29_RS19760 PF00378 Enoyl-CoA hydratase/isomerase AU29_RS19760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AU29_RS19760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AU29_RS19765 PF00557 Metallopeptidase family M24 AU29_RS19770 PF09186 Domain of unknown function (DUF1949) AU29_RS19770 PF01205 Uncharacterized protein family UPF0029 AU29_RS19775 PF02386 Cation transport protein AU29_RS19780 PF12724 Flavodoxin domain AU29_RS19810 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AU29_RS19815 PF12804 MobA-like NTP transferase domain AU29_RS19820 PF06288 Protein of unknown function (DUF1040) AU29_RS19825 PF01636 Phosphotransferase enzyme family AU29_RS19830 PF01323 DSBA-like thioredoxin domain AU29_RS19835 PF01553 Acyltransferase AU29_RS19845 PF01367 5'-3' exonuclease, C-terminal SAM fold AU29_RS19845 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AU29_RS19845 PF00476 DNA polymerase family A AU29_RS19845 PF01612 3'-5' exonuclease AU29_RS19850 PF01926 50S ribosome-binding GTPase AU29_RS19860 PF04220 Der GTPase activator (YihI) AU29_RS19865 PF06969 HemN C-terminal domain AU29_RS19865 PF04055 Radical SAM superfamily AU29_RS19870 PF00072 Response regulator receiver domain AU29_RS19870 PF00158 Sigma-54 interaction domain AU29_RS19870 PF02954 Bacterial regulatory protein, Fis family AU29_RS19875 PF00989 PAS fold AU29_RS19875 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS19875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS19880 PF03951 Glutamine synthetase, beta-Grasp domain AU29_RS19880 PF00120 Glutamine synthetase, catalytic domain AU29_RS19885 PF03144 Elongation factor Tu domain 2 AU29_RS19885 PF00009 Elongation factor Tu GTP binding domain AU29_RS19885 PF00679 Elongation factor G C-terminus AU29_RS19900 PF04055 Radical SAM superfamily AU29_RS19920 PF06178 Oligogalacturonate-specific porin protein (KdgM) AU29_RS19935 PF01055 Glycosyl hydrolases family 31 AU29_RS19940 PF01263 Aldose 1-epimerase AU29_RS19950 PF01791 DeoC/LacD family aldolase AU29_RS19955 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AU29_RS19955 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AU29_RS19960 PF00294 pfkB family carbohydrate kinase AU29_RS19965 PF08220 DeoR-like helix-turn-helix domain AU29_RS19965 PF00455 DeoR C terminal sensor domain AU29_RS19970 PF13419 Haloacid dehalogenase-like hydrolase AU29_RS19975 PF03631 Virulence factor BrkB AU29_RS19980 PF02580 D-Tyr-tRNA(Tyr) deacylase AU29_RS19985 PF00583 Acetyltransferase (GNAT) family AU29_RS19985 PF09500 Putative thioesterase (yiiD_Cterm) AU29_RS19990 PF01381 Helix-turn-helix AU29_RS19995 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AU29_RS20000 PF07859 alpha/beta hydrolase fold AU29_RS20005 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AU29_RS20015 PF04216 Protein involved in formate dehydrogenase formation AU29_RS20020 PF01292 Prokaryotic cytochrome b561 AU29_RS20025 PF09163 Formate dehydrogenase N, transmembrane AU29_RS20025 PF13247 4Fe-4S dicluster domain AU29_RS20030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS20030 PF01568 Molydopterin dinucleotide binding domain AU29_RS20030 PF00384 Molybdopterin oxidoreductase AU29_RS20035 PF01568 Molydopterin dinucleotide binding domain AU29_RS20035 PF00384 Molybdopterin oxidoreductase AU29_RS20035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS20040 PF02634 FdhD/NarQ family AU29_RS20050 PF12889 Protein of unknown function (DUF3829) AU29_RS20055 PF12889 Protein of unknown function (DUF3829) AU29_RS20065 PF03591 AzlC protein AU29_RS20075 PF05336 L-rhamnose mutarotase AU29_RS20080 PF00465 Iron-containing alcohol dehydrogenase AU29_RS20085 PF00596 Class II Aldolase and Adducin N-terminal domain AU29_RS20090 PF06134 L-rhamnose isomerase (RhaA) AU29_RS20095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AU29_RS20095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AU29_RS20100 PF12833 Helix-turn-helix domain AU29_RS20100 PF02311 AraC-like ligand binding domain AU29_RS20105 PF02311 AraC-like ligand binding domain AU29_RS20105 PF12833 Helix-turn-helix domain AU29_RS20110 PF06379 L-rhamnose-proton symport protein (RhaT) AU29_RS20120 PF06178 Oligogalacturonate-specific porin protein (KdgM) AU29_RS20125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AU29_RS20130 PF03480 Bacterial extracellular solute-binding protein, family 7 AU29_RS20135 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AU29_RS20135 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AU29_RS20140 PF03473 MOSC domain AU29_RS20140 PF03475 3-alpha domain AU29_RS20155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS20155 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS20155 PF00672 HAMP domain AU29_RS20155 PF16527 Two-component sensor protein CpxA, periplasmic domain AU29_RS20160 PF00486 Transcriptional regulatory protein, C terminal AU29_RS20160 PF00072 Response regulator receiver domain AU29_RS20165 PF07813 LTXXQ motif family protein AU29_RS20170 PF16916 Dimerisation domain of Zinc Transporter AU29_RS20170 PF01545 Cation efflux family AU29_RS20175 PF00365 Phosphofructokinase AU29_RS20185 PF02611 CDP-diacylglycerol pyrophosphatase AU29_RS20195 PF00294 pfkB family carbohydrate kinase AU29_RS20205 PF00155 Aminotransferase class I and II AU29_RS20205 PF00392 Bacterial regulatory proteins, gntR family AU29_RS20220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AU29_RS20220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AU29_RS20225 PF04198 Putative sugar-binding domain AU29_RS20230 PF00005 ABC transporter AU29_RS20235 PF02653 Branched-chain amino acid transport system / permease component AU29_RS20240 PF02653 Branched-chain amino acid transport system / permease component AU29_RS20245 PF13407 Periplasmic binding protein domain AU29_RS20250 PF01791 DeoC/LacD family aldolase AU29_RS20255 PF03992 Antibiotic biosynthesis monooxygenase AU29_RS20260 PF00834 Ribulose-phosphate 3 epimerase family AU29_RS20265 PF00121 Triosephosphate isomerase AU29_RS20270 PF07305 Protein of unknown function (DUF1454) AU29_RS20275 PF05656 Protein of unknown function (DUF805) AU29_RS20280 PF00175 Oxidoreductase NAD-binding domain AU29_RS20280 PF00970 Oxidoreductase FAD-binding domain AU29_RS20285 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AU29_RS20290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AU29_RS20290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AU29_RS20295 PF00230 Major intrinsic protein AU29_RS20300 PF06005 Cell division protein ZapB AU29_RS20305 PF03737 Aldolase/RraA AU29_RS20310 PF01040 UbiA prenyltransferase family AU29_RS20315 PF07724 AAA domain (Cdc48 subfamily) AU29_RS20315 PF10431 C-terminal, D2-small domain, of ClpB protein AU29_RS20315 PF00004 ATPase family associated with various cellular activities (AAA) AU29_RS20320 PF00227 Proteasome subunit AU29_RS20325 PF05036 Sporulation related domain AU29_RS20330 PF00356 Bacterial regulatory proteins, lacI family AU29_RS20335 PF17764 3′ DNA-binding domain (3′BD) AU29_RS20335 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AU29_RS20335 PF18074 Primosomal protein N C-terminal domain AU29_RS20335 PF00271 Helicase conserved C-terminal domain AU29_RS20335 PF00270 DEAD/DEAH box helicase AU29_RS20340 PF01197 Ribosomal protein L31 AU29_RS20350 PF17425 Arylsulfotransferase Ig-like domain AU29_RS20350 PF05935 Arylsulfotransferase (ASST) AU29_RS20355 PF01340 Met Apo-repressor, MetJ AU29_RS20360 PF01053 Cys/Met metabolism PLP-dependent enzyme AU29_RS20365 PF00742 Homoserine dehydrogenase AU29_RS20365 PF03447 Homoserine dehydrogenase, NAD binding domain AU29_RS20365 PF00696 Amino acid kinase family AU29_RS20370 PF00924 Mechanosensitive ion channel AU29_RS20370 PF05552 Conserved TM helix AU29_RS20385 PF00149 Calcineurin-like phosphoesterase AU29_RS20385 PF17936 Bacterial Ig domain AU29_RS20385 PF02872 5'-nucleotidase, C-terminal domain AU29_RS20390 PF00464 Serine hydroxymethyltransferase AU29_RS20395 PF01168 Alanine racemase, N-terminal domain AU29_RS20395 PF00842 Alanine racemase, C-terminal domain AU29_RS20400 PF00155 Aminotransferase class I and II AU29_RS20400 PF00392 Bacterial regulatory proteins, gntR family AU29_RS20410 PF02219 Methylenetetrahydrofolate reductase AU29_RS20415 PF00141 Peroxidase AU29_RS20420 PF06940 Domain of unknown function (DUF1287) AU29_RS20425 PF00465 Iron-containing alcohol dehydrogenase AU29_RS20430 PF00923 Transaldolase/Fructose-6-phosphate aldolase AU29_RS20435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AU29_RS20435 PF00391 PEP-utilising enzyme, mobile domain AU29_RS20435 PF00381 PTS HPr component phosphorylation site AU29_RS20435 PF05524 PEP-utilising enzyme, N-terminal AU29_RS20435 PF02896 PEP-utilising enzyme, TIM barrel domain AU29_RS20445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AU29_RS20450 PF02901 Pyruvate formate lyase-like AU29_RS20450 PF01228 Glycine radical AU29_RS20455 PF04055 Radical SAM superfamily AU29_RS20460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AU29_RS20465 PF12833 Helix-turn-helix domain AU29_RS20470 PF00884 Sulfatase AU29_RS20475 PF00311 Phosphoenolpyruvate carboxylase AU29_RS20480 PF01546 Peptidase family M20/M25/M40 AU29_RS20480 PF07687 Peptidase dimerisation domain AU29_RS20485 PF01118 Semialdehyde dehydrogenase, NAD binding domain AU29_RS20485 PF02774 Semialdehyde dehydrogenase, dimerisation domain AU29_RS20490 PF00696 Amino acid kinase family AU29_RS20495 PF00206 Lyase AU29_RS20495 PF14698 Argininosuccinate lyase C-terminal AU29_RS20500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS20500 PF03466 LysR substrate binding domain AU29_RS20505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AU29_RS20505 PF07992 Pyridine nucleotide-disulphide oxidoreductase AU29_RS20510 PF00440 Bacterial regulatory proteins, tetR family AU29_RS20515 PF07226 Protein of unknown function (DUF1422) AU29_RS20520 PF05958 tRNA (Uracil-5-)-methyltransferase AU29_RS20525 PF00593 TonB dependent receptor AU29_RS20525 PF07715 TonB-dependent Receptor Plug Domain AU29_RS20530 PF01177 Asp/Glu/Hydantoin racemase AU29_RS20560 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AU29_RS20560 PF01565 FAD binding domain AU29_RS20565 PF08279 HTH domain AU29_RS20565 PF02237 Biotin protein ligase C terminal domain AU29_RS20565 PF03099 Biotin/lipoate A/B protein ligase family AU29_RS20570 PF00485 Phosphoribulokinase / Uridine kinase family AU29_RS20600 PF00009 Elongation factor Tu GTP binding domain AU29_RS20600 PF03143 Elongation factor Tu C-terminal domain AU29_RS20600 PF03144 Elongation factor Tu domain 2 AU29_RS20605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AU29_RS20610 PF02357 Transcription termination factor nusG AU29_RS20610 PF00467 KOW motif AU29_RS20615 PF03946 Ribosomal protein L11, N-terminal domain AU29_RS20615 PF00298 Ribosomal protein L11, RNA binding domain AU29_RS20620 PF00687 Ribosomal protein L1p/L10e family AU29_RS20625 PF00466 Ribosomal protein L10 AU29_RS20630 PF16320 Ribosomal protein L7/L12 dimerisation domain AU29_RS20630 PF00542 Ribosomal protein L7/L12 C-terminal domain AU29_RS20635 PF04560 RNA polymerase Rpb2, domain 7 AU29_RS20635 PF00562 RNA polymerase Rpb2, domain 6 AU29_RS20635 PF10385 RNA polymerase beta subunit external 1 domain AU29_RS20635 PF04561 RNA polymerase Rpb2, domain 2 AU29_RS20635 PF04563 RNA polymerase beta subunit AU29_RS20635 PF04565 RNA polymerase Rpb2, domain 3 AU29_RS20640 PF04983 RNA polymerase Rpb1, domain 3 AU29_RS20640 PF05000 RNA polymerase Rpb1, domain 4 AU29_RS20640 PF04998 RNA polymerase Rpb1, domain 5 AU29_RS20640 PF00623 RNA polymerase Rpb1, domain 2 AU29_RS20640 PF04997 RNA polymerase Rpb1, domain 1 AU29_RS20665 PF06968 Biotin and Thiamin Synthesis associated domain AU29_RS20665 PF04055 Radical SAM superfamily AU29_RS20670 PF05690 Thiazole biosynthesis protein ThiG AU29_RS20675 PF02597 ThiS family AU29_RS20680 PF00899 ThiF family AU29_RS20685 PF02581 Thiamine monophosphate synthase AU29_RS20690 PF13667 ThiC-associated domain AU29_RS20690 PF01964 Radical SAM ThiC family AU29_RS20695 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AU29_RS20700 PF00293 NUDIX domain AU29_RS20700 PF09297 NADH pyrophosphatase zinc ribbon domain AU29_RS20705 PF01208 Uroporphyrinogen decarboxylase (URO-D) AU29_RS20710 PF04493 Endonuclease V AU29_RS20715 PF04222 Protein of unknown function (DUF416) AU29_RS20720 PF00216 Bacterial DNA-binding protein AU29_RS20725 PF07356 Protein of unknown function (DUF1481) AU29_RS20730 PF13801 Heavy-metal resistance AU29_RS20735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS20735 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS20740 PF00158 Sigma-54 interaction domain AU29_RS20740 PF00072 Response regulator receiver domain AU29_RS20740 PF02954 Bacterial regulatory protein, Fis family AU29_RS20745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AU29_RS20745 PF02843 Phosphoribosylglycinamide synthetase, C domain AU29_RS20745 PF02844 Phosphoribosylglycinamide synthetase, N domain AU29_RS20750 PF02142 MGS-like domain AU29_RS20750 PF01808 AICARFT/IMPCHase bienzyme AU29_RS20775 PF13673 Acetyltransferase (GNAT) domain AU29_RS20780 PF04204 Homoserine O-succinyltransferase AU29_RS20785 PF01274 Malate synthase AU29_RS20790 PF00463 Isocitrate lyase family AU29_RS20795 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AU29_RS20805 PF01614 Bacterial transcriptional regulator AU29_RS20805 PF09339 IclR helix-turn-helix domain AU29_RS20810 PF02310 B12 binding domain AU29_RS20810 PF02607 B12 binding domain AU29_RS20810 PF02574 Homocysteine S-methyltransferase AU29_RS20810 PF02965 Vitamin B12 dependent methionine synthase, activation domain AU29_RS20810 PF00809 Pterin binding enzyme AU29_RS20815 PF02690 Na+/Pi-cotransporter AU29_RS20820 PF03575 Peptidase family S51 AU29_RS20830 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AU29_RS20835 PF01479 S4 domain AU29_RS20835 PF00849 RNA pseudouridylate synthase AU29_RS20840 PF11656 YjbD family (DUF3811) AU29_RS20845 PF08220 DeoR-like helix-turn-helix domain AU29_RS20845 PF00455 DeoR C terminal sensor domain AU29_RS20880 PF08765 Mor transcription activator family AU29_RS20885 PF00696 Amino acid kinase family AU29_RS20885 PF01842 ACT domain AU29_RS20890 PF00342 Phosphoglucose isomerase AU29_RS20900 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AU29_RS20905 PF06251 Capsule biosynthesis GfcC AU29_RS20910 PF06082 Exopolysaccharide biosynthesis protein YbjH AU29_RS20915 PF06146 Phosphate-starvation-inducible E AU29_RS20920 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS20925 PF00528 Binding-protein-dependent transport system inner membrane component AU29_RS20925 PF14785 Maltose transport system permease protein MalF P2 domain AU29_RS20930 PF01547 Bacterial extracellular solute-binding protein AU29_RS20935 PF00005 ABC transporter AU29_RS20935 PF17912 MalK OB fold domain AU29_RS20940 PF02264 LamB porin AU29_RS20945 PF07148 Maltose operon periplasmic protein precursor (MalM) AU29_RS20950 PF04345 Chorismate lyase AU29_RS20955 PF01040 UbiA prenyltransferase family AU29_RS20960 PF01553 Acyltransferase AU29_RS20965 PF01219 Prokaryotic diacylglycerol kinase AU29_RS20970 PF00717 Peptidase S24-like AU29_RS20970 PF01726 LexA DNA binding domain AU29_RS20975 PF01554 MatE AU29_RS20985 PF05532 CsbD-like AU29_RS20990 PF01475 Ferric uptake regulator family AU29_RS21000 PF01207 Dihydrouridine synthase (Dus) AU29_RS21005 PF09583 Phage shock protein G (Phageshock_PspG) AU29_RS21010 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS21010 PF00107 Zinc-binding dehydrogenase AU29_RS21015 PF03796 DnaB-like helicase C terminal domain AU29_RS21015 PF00772 DnaB-like helicase N terminal domain AU29_RS21020 PF00842 Alanine racemase, C-terminal domain AU29_RS21020 PF01168 Alanine racemase, N-terminal domain AU29_RS21025 PF00155 Aminotransferase class I and II AU29_RS21030 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AU29_RS21035 PF01894 Uncharacterised protein family UPF0047 AU29_RS21040 PF04237 YjbR AU29_RS21055 PF17760 UvrA interaction domain AU29_RS21055 PF17755 UvrA DNA-binding domain AU29_RS21055 PF00005 ABC transporter AU29_RS21065 PF00436 Single-strand binding protein family AU29_RS21095 PF00664 ABC transporter transmembrane region AU29_RS21095 PF00005 ABC transporter AU29_RS21100 PF15940 Family of unknown function AU29_RS21105 PF12792 CSS motif domain associated with EAL AU29_RS21105 PF00563 EAL domain AU29_RS21110 PF12833 Helix-turn-helix domain AU29_RS21115 PF09278 MerR, DNA binding AU29_RS21115 PF00376 MerR family regulatory protein AU29_RS21125 PF00860 Permease family AU29_RS21130 PF00999 Sodium/hydrogen exchanger family AU29_RS21135 PF03466 LysR substrate binding domain AU29_RS21135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS21140 PF03788 LrgA family AU29_RS21145 PF04172 LrgB-like family AU29_RS21150 PF00474 Sodium:solute symporter family AU29_RS21155 PF04341 Protein of unknown function, DUF485 AU29_RS21160 PF16177 Acetyl-coenzyme A synthetase N-terminus AU29_RS21160 PF00501 AMP-binding enzyme AU29_RS21160 PF13193 AMP-binding enzyme C-terminal domain AU29_RS21170 PF02335 Cytochrome c552 AU29_RS21175 PF13435 Cytochrome c554 and c-prime AU29_RS21175 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AU29_RS21180 PF00037 4Fe-4S binding domain AU29_RS21180 PF13247 4Fe-4S dicluster domain AU29_RS21185 PF03916 Polysulphide reductase, NrfD AU29_RS21190 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AU29_RS21190 PF01578 Cytochrome C assembly protein AU29_RS21195 PF03918 Cytochrome C biogenesis protein AU29_RS21205 PF00375 Sodium:dicarboxylate symporter family AU29_RS21210 PF08238 Sel1 repeat AU29_RS21215 PF01568 Molydopterin dinucleotide binding domain AU29_RS21215 PF00384 Molybdopterin oxidoreductase AU29_RS21215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS21220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS21220 PF00384 Molybdopterin oxidoreductase AU29_RS21220 PF01568 Molydopterin dinucleotide binding domain AU29_RS21230 PF00583 Acetyltransferase (GNAT) family AU29_RS21235 PF06983 3-demethylubiquinone-9 3-methyltransferase AU29_RS21240 PF08274 PhnA Zinc-Ribbon AU29_RS21240 PF03831 PhnA domain AU29_RS21245 PF08946 Osmosensory transporter coiled coil AU29_RS21245 PF00083 Sugar (and other) transporter AU29_RS21250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS21250 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS21255 PF00072 Response regulator receiver domain AU29_RS21255 PF00486 Transcriptional regulatory protein, C terminal AU29_RS21260 PF00884 Sulfatase AU29_RS21260 PF08019 Phosphoethanolamine transferase EptA/EptB AU29_RS21265 PF13520 Amino acid permease AU29_RS21270 PF12833 Helix-turn-helix domain AU29_RS21280 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AU29_RS21280 PF01276 Orn/Lys/Arg decarboxylase, major domain AU29_RS21280 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AU29_RS21285 PF12833 Helix-turn-helix domain AU29_RS21290 PF02056 Family 4 glycosyl hydrolase AU29_RS21290 PF11975 Family 4 glycosyl hydrolase C-terminal domain AU29_RS21300 PF05683 Fumarase C-terminus AU29_RS21300 PF05681 Fumarate hydratase (Fumerase) AU29_RS21305 PF03605 Anaerobic c4-dicarboxylate membrane transporter AU29_RS21315 PF00072 Response regulator receiver domain AU29_RS21320 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AU29_RS21320 PF17203 Single cache domain 3 AU29_RS21320 PF00989 PAS fold AU29_RS21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS21325 PF01568 Molydopterin dinucleotide binding domain AU29_RS21325 PF00384 Molybdopterin oxidoreductase AU29_RS21325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AU29_RS21330 PF13247 4Fe-4S dicluster domain AU29_RS21330 PF12800 4Fe-4S binding domain AU29_RS21335 PF04976 DMSO reductase anchor subunit (DmsC) AU29_RS21340 PF02613 Nitrate reductase delta subunit AU29_RS21350 PF06977 SdiA-regulated AU29_RS21360 PF00196 Bacterial regulatory proteins, luxR family AU29_RS21360 PF00072 Response regulator receiver domain AU29_RS21365 PF12833 Helix-turn-helix domain AU29_RS21385 PF01569 PAP2 superfamily AU29_RS21400 PF11412 Disulphide bond corrector protein DsbC AU29_RS21400 PF02683 Cytochrome C biogenesis protein transmembrane region AU29_RS21405 PF03091 CutA1 divalent ion tolerance protein AU29_RS21410 PF03605 Anaerobic c4-dicarboxylate membrane transporter AU29_RS21415 PF00206 Lyase AU29_RS21415 PF10415 Fumarase C C-terminus AU29_RS21425 PF04186 FxsA cytoplasmic membrane protein AU29_RS21430 PF13520 Amino acid permease AU29_RS21435 PF00166 Chaperonin 10 Kd subunit AU29_RS21440 PF00118 TCP-1/cpn60 chaperonin family AU29_RS21445 PF13698 Domain of unknown function (DUF4156) AU29_RS21450 PF15922 YjeJ-like AU29_RS21455 PF04055 Radical SAM superfamily AU29_RS21460 PF08207 Elongation factor P (EF-P) KOW-like domain AU29_RS21460 PF01132 Elongation factor P (EF-P) OB domain AU29_RS21460 PF09285 Elongation factor P, C-terminal AU29_RS21465 PF08085 Entericidin EcnA/B family AU29_RS21470 PF08085 Entericidin EcnA/B family AU29_RS21475 PF00196 Bacterial regulatory proteins, luxR family AU29_RS21480 PF00893 Small Multidrug Resistance protein AU29_RS21485 PF08212 Lipocalin-like domain AU29_RS21490 PF02313 Fumarate reductase subunit D AU29_RS21495 PF02300 Fumarate reductase subunit C AU29_RS21500 PF13085 2Fe-2S iron-sulfur cluster binding domain AU29_RS21500 PF13183 4Fe-4S dicluster domain AU29_RS21505 PF02910 Fumarate reductase flavoprotein C-term AU29_RS21505 PF00890 FAD binding domain AU29_RS21510 PF00152 tRNA synthetases class II (D, K and N) AU29_RS21515 PF13520 Amino acid permease AU29_RS21520 PF10840 Protein of unknown function (DUF2645) AU29_RS21525 PF12794 Mechanosensitive ion channel inner membrane domain 1 AU29_RS21525 PF12795 Mechanosensitive ion channel porin domain AU29_RS21525 PF00924 Mechanosensitive ion channel AU29_RS21530 PF02666 Phosphatidylserine decarboxylase AU29_RS21535 PF03193 RsgA GTPase AU29_RS21540 PF00929 Exonuclease AU29_RS21545 PF00497 Bacterial extracellular solute-binding proteins, family 3 AU29_RS21565 PF08331 Domain of unknown function (DUF1730) AU29_RS21570 PF03853 YjeF-related protein N-terminus AU29_RS21570 PF01256 Carbohydrate kinase AU29_RS21575 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AU29_RS21580 PF01520 N-acetylmuramoyl-L-alanine amidase AU29_RS21585 PF01119 DNA mismatch repair protein, C-terminal domain AU29_RS21585 PF08676 MutL C terminal dimerisation domain AU29_RS21595 PF17209 Hfq protein AU29_RS21600 PF01926 50S ribosome-binding GTPase AU29_RS21600 PF16360 GTP-binding GTPase Middle Region AU29_RS21600 PF13167 GTP-binding GTPase N-terminal AU29_RS21605 PF12221 Bacterial membrane protein N terminal AU29_RS21605 PF01145 SPFH domain / Band 7 family AU29_RS21610 PF01145 SPFH domain / Band 7 family AU29_RS21615 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AU29_RS21620 PF00709 Adenylosuccinate synthetase AU29_RS21625 PF02082 Transcriptional regulator AU29_RS21630 PF00773 RNB domain AU29_RS21630 PF08206 Ribonuclease B OB domain AU29_RS21630 PF08461 Ribonuclease R winged-helix domain AU29_RS21630 PF00575 S1 RNA binding domain AU29_RS21630 PF17876 Cold shock domain AU29_RS21635 PF00588 SpoU rRNA Methylase family AU29_RS21635 PF08032 RNA 2'-O ribose methyltransferase substrate binding AU29_RS21640 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) AU29_RS21645 PF04012 PspA/IM30 family AU29_RS21655 PF10679 Protein of unknown function (DUF2491) AU29_RS21660 PF03994 Domain of Unknown Function (DUF350) AU29_RS21665 PF06693 Protein of unknown function (DUF1190) AU29_RS21670 PF03738 Glutathionylspermidine synthase preATP-grasp AU29_RS21675 PF02770 Acyl-CoA dehydrogenase, middle domain AU29_RS21675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AU29_RS21675 PF18158 Adaptive response protein AidB N-terminal domain AU29_RS21680 PF07338 Protein of unknown function (DUF1471) AU29_RS21685 PF07338 Protein of unknown function (DUF1471) AU29_RS21690 PF00326 Prolyl oligopeptidase family AU29_RS21695 PF00455 DeoR C terminal sensor domain AU29_RS21695 PF08220 DeoR-like helix-turn-helix domain AU29_RS21705 PF03611 PTS system sugar-specific permease component AU29_RS21710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AU29_RS21715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AU29_RS21720 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AU29_RS21725 PF01261 Xylose isomerase-like TIM barrel AU29_RS21730 PF00596 Class II Aldolase and Adducin N-terminal domain AU29_RS21735 PF07338 Protein of unknown function (DUF1471) AU29_RS21745 PF01250 Ribosomal protein S6 AU29_RS21750 PF00436 Single-strand binding protein family AU29_RS21755 PF01084 Ribosomal protein S18 AU29_RS21760 PF03948 Ribosomal protein L9, C-terminal domain AU29_RS21760 PF01281 Ribosomal protein L9, N-terminal domain AU29_RS21770 PF08525 Opacity-associated protein A N-terminal motif AU29_RS21770 PF04225 Opacity-associated protein A LysM-like domain AU29_RS21775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AU29_RS21775 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AU29_RS21780 PF00324 Amino acid permease AU29_RS21795 PF04405 Domain of Unknown function (DUF542) AU29_RS21795 PF01814 Hemerythrin HHE cation binding domain AU29_RS21800 PF00892 EamA-like transporter family AU29_RS21805 PF05368 NmrA-like family AU29_RS21810 PF01638 HxlR-like helix-turn-helix AU29_RS21815 PF02872 5'-nucleotidase, C-terminal domain AU29_RS21815 PF00149 Calcineurin-like phosphoesterase AU29_RS21820 PF00459 Inositol monophosphatase family AU29_RS21825 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AU29_RS21830 PF06526 Protein of unknown function (DUF1107) AU29_RS21835 PF01595 Cyclin M transmembrane N-terminal domain AU29_RS21835 PF03471 Transporter associated domain AU29_RS21835 PF00571 CBS domain AU29_RS21840 PF01625 Peptide methionine sulfoxide reductase AU29_RS21845 PF07244 Surface antigen variable number repeat AU29_RS21845 PF01103 Surface antigen AU29_RS21845 PF17243 POTRA domain TamA domain 1 AU29_RS21850 PF04357 TamB, inner membrane protein subunit of TAM complex AU29_RS21855 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AU29_RS21860 PF07690 Major Facilitator Superfamily AU29_RS21865 PF01979 Amidohydrolase family AU29_RS21870 PF00719 Inorganic pyrophosphatase AU29_RS21875 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AU29_RS21880 PF02875 Mur ligase family, glutamate ligase domain AU29_RS21880 PF08245 Mur ligase middle domain AU29_RS21880 PF01225 Mur ligase family, catalytic domain AU29_RS21885 PF04751 Protein of unknown function (DUF615) AU29_RS21890 PF01523 Putative modulator of DNA gyrase AU29_RS21895 PF07361 Cytochrome b562 AU29_RS21925 PF01979 Amidohydrolase family AU29_RS21930 PF03841 L-seryl-tRNA selenium transferase AU29_RS21935 PF07071 KDGP aldolase AU29_RS21940 PF08279 HTH domain AU29_RS21940 PF00874 PRD domain AU29_RS21940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AU29_RS21940 PF05043 Mga helix-turn-helix domain AU29_RS21945 PF04221 RelB antitoxin AU29_RS21950 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AU29_RS21960 PF03477 ATP cone domain AU29_RS21960 PF13597 Anaerobic ribonucleoside-triphosphate reductase AU29_RS21970 PF00128 Alpha amylase, catalytic domain AU29_RS21970 PF11941 Domain of unknown function (DUF3459) AU29_RS21975 PF02378 Phosphotransferase system, EIIC AU29_RS21975 PF00367 phosphotransferase system, EIIB AU29_RS21980 PF00356 Bacterial regulatory proteins, lacI family AU29_RS21985 PF00689 Cation transporting ATPase, C-terminus AU29_RS21985 PF00690 Cation transporter/ATPase, N-terminus AU29_RS21995 PF01042 Endoribonuclease L-PSP AU29_RS22000 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AU29_RS22000 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AU29_RS22005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AU29_RS22005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AU29_RS22010 PF08052 PyrBI operon leader peptide AU29_RS22015 PF02863 Arginine repressor, C-terminal domain AU29_RS22015 PF01316 Arginine repressor, DNA binding domain AU29_RS22020 PF03606 C4-dicarboxylate anaerobic carrier AU29_RS22025 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AU29_RS22025 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AU29_RS22030 PF00696 Amino acid kinase family AU29_RS22040 PF04074 YhcH/YjgK/YiaL AU29_RS22045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AU29_RS22045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AU29_RS22050 PF06877 Regulator of ribonuclease activity B AU29_RS22055 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AU29_RS22060 PF12276 Protein of unknown function (DUF3617) AU29_RS22065 PF12276 Protein of unknown function (DUF3617) AU29_RS22070 PF00583 Acetyltransferase (GNAT) family AU29_RS22075 PF05987 Bacterial protein of unknown function (DUF898) AU29_RS22080 PF08264 Anticodon-binding domain of tRNA AU29_RS22080 PF10458 Valyl tRNA synthetase tRNA binding arm AU29_RS22080 PF00133 tRNA synthetases class I (I, L, M and V) AU29_RS22085 PF04364 DNA polymerase III chi subunit, HolC AU29_RS22090 PF02789 Cytosol aminopeptidase family, N-terminal domain AU29_RS22090 PF00883 Cytosol aminopeptidase family, catalytic domain AU29_RS22100 PF03739 Lipopolysaccharide export system permease LptF/LptG AU29_RS22105 PF03739 Lipopolysaccharide export system permease LptF/LptG AU29_RS22110 PF00356 Bacterial regulatory proteins, lacI family AU29_RS22115 PF02447 GntP family permease AU29_RS22120 PF00106 short chain dehydrogenase AU29_RS22125 PF00107 Zinc-binding dehydrogenase AU29_RS22125 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS22130 PF01202 Shikimate kinase AU29_RS22135 PF08240 Alcohol dehydrogenase GroES-like domain AU29_RS22135 PF00107 Zinc-binding dehydrogenase AU29_RS22145 PF13358 DDE superfamily endonuclease AU29_RS22145 PF13592 Winged helix-turn helix AU29_RS22165 PF00665 Integrase core domain AU29_RS22165 PF13333 Integrase core domain AU29_RS22165 PF13276 HTH-like domain AU29_RS22170 PF00665 Integrase core domain AU29_RS22170 PF13333 Integrase core domain AU29_RS22170 PF13276 HTH-like domain AU29_RS22175 PF06443 SEF14-like adhesin AU29_RS22180 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS22180 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS22185 PF13953 PapC C-terminal domain AU29_RS22185 PF13954 PapC N-terminal domain AU29_RS22185 PF00577 Outer membrane usher protein AU29_RS22195 PF12833 Helix-turn-helix domain AU29_RS22210 PF01323 DSBA-like thioredoxin domain AU29_RS22215 PF06977 SdiA-regulated AU29_RS22220 PF01527 Transposase AU29_RS22230 PF13683 Integrase core domain AU29_RS22230 PF13276 HTH-like domain AU29_RS22240 PF01709 Transcriptional regulator AU29_RS22245 PF13847 Methyltransferase domain AU29_RS22250 PF09857 Putative toxin of bacterial toxin-antitoxin pair AU29_RS22270 PF03625 Domain of unknown function DUF302 AU29_RS22270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AU29_RS22275 PF01738 Dienelactone hydrolase family AU29_RS22280 PF00392 Bacterial regulatory proteins, gntR family AU29_RS22280 PF07729 FCD domain AU29_RS22285 PF00579 tRNA synthetases class I (W and Y) AU29_RS22300 PF01177 Asp/Glu/Hydantoin racemase AU29_RS22305 PF03466 LysR substrate binding domain AU29_RS22305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AU29_RS22310 PF01979 Amidohydrolase family AU29_RS22315 PF07670 Nucleoside recognition AU29_RS22320 PF07670 Nucleoside recognition AU29_RS22330 PF06779 Uncharacterised MFS-type transporter YbfB AU29_RS22335 PF04286 Protein of unknown function (DUF445) AU29_RS22340 PF07690 Major Facilitator Superfamily AU29_RS22345 PF04754 Putative transposase, YhgA-like AU29_RS22350 PF00171 Aldehyde dehydrogenase family AU29_RS22370 PF18766 SWI2/SNF2 ATPase AU29_RS22370 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AU29_RS22370 PF11867 Domain of unknown function (DUF3387) AU29_RS22375 PF01420 Type I restriction modification DNA specificity domain AU29_RS22380 PF02384 N-6 DNA Methylase AU29_RS22385 PF04471 Restriction endonuclease AU29_RS22385 PF14338 Mrr N-terminal domain AU29_RS22400 PF02384 N-6 DNA Methylase AU29_RS22400 PF12161 HsdM N-terminal domain AU29_RS22430 PF02492 CobW/HypB/UreG, nucleotide-binding domain AU29_RS22430 PF07683 Cobalamin synthesis protein cobW C-terminal domain AU29_RS22435 PF04328 Selenoprotein, putative AU29_RS22440 PF02554 Carbon starvation protein CstA AU29_RS22440 PF13722 5TM C-terminal transporter carbon starvation CstA AU29_RS22445 PF00672 HAMP domain AU29_RS22445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AU29_RS22445 PF02203 Tar ligand binding domain homologue AU29_RS22450 PF00158 Sigma-54 interaction domain AU29_RS22450 PF00874 PRD domain AU29_RS22460 PF03830 PTS system sorbose subfamily IIB component AU29_RS22465 PF03609 PTS system sorbose-specific iic component AU29_RS22470 PF03613 PTS system mannose/fructose/sorbose family IID component AU29_RS22475 PF01380 SIS domain AU29_RS22480 PF01380 SIS domain AU29_RS22485 PF00884 Sulfatase AU29_RS22490 PF10696 Protein of unknown function (DUF2501) AU29_RS22495 PF01695 IstB-like ATP binding protein AU29_RS22500 PF17948 DnaT DNA-binding domain AU29_RS22505 PF12821 Threonine/Serine exporter, ThrE AU29_RS22510 PF06738 Putative threonine/serine exporter AU29_RS22515 PF00196 Bacterial regulatory proteins, luxR family AU29_RS22520 PF00196 Bacterial regulatory proteins, luxR family AU29_RS22525 PF04073 Aminoacyl-tRNA editing domain AU29_RS22530 PF11575 FhuF 2Fe-2S C-terminal domain AU29_RS22530 PF06276 Ferric iron reductase FhuF-like transporter AU29_RS22535 PF05230 MASE2 domain AU29_RS22535 PF00990 Diguanylate cyclase, GGDEF domain AU29_RS22540 PF07256 Protein of unknown function (DUF1435) AU29_RS22560 PF05175 Methyltransferase small domain AU29_RS22560 PF08468 Methyltransferase small domain N-terminal AU29_RS22565 PF03603 DNA polymerase III psi subunit AU29_RS22570 PF00583 Acetyltransferase (GNAT) family AU29_RS22575 PF13419 Haloacid dehalogenase-like hydrolase AU29_RS22580 PF16658 Class II release factor RF3, C-terminal domain AU29_RS22580 PF03144 Elongation factor Tu domain 2 AU29_RS22580 PF00009 Elongation factor Tu GTP binding domain AU29_RS22585 PF04972 BON domain AU29_RS22590 PF07043 Protein of unknown function (DUF1328) AU29_RS22595 PF01734 Patatin-like phospholipase AU29_RS22600 PF01026 TatD related DNase AU29_RS22605 PF04055 Radical SAM superfamily AU29_RS22610 PF11230 Protein of unknown function (DUF3029) AU29_RS22615 PF01791 DeoC/LacD family aldolase AU29_RS22620 PF02885 Glycosyl transferase family, helical bundle domain AU29_RS22620 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AU29_RS22620 PF00591 Glycosyl transferase family, a/b domain AU29_RS22625 PF01676 Metalloenzyme superfamily AU29_RS22630 PF01048 Phosphorylase superfamily AU29_RS22635 PF07804 HipA-like C-terminal domain AU29_RS22640 PF10437 Bacterial lipoate protein ligase C-terminus AU29_RS22640 PF03099 Biotin/lipoate A/B protein ligase family AU29_RS22645 PF10144 Bacterial virulence factor haemolysin AU29_RS22650 PF18429 Domain of unknown function (DUF5609) AU29_RS22655 PF18073 Rubredoxin metal binding domain AU29_RS22660 PF01381 Helix-turn-helix AU29_RS22660 PF13521 AAA domain AU29_RS22665 PF00005 ABC transporter AU29_RS22665 PF12848 ABC transporter AU29_RS22670 PF14718 Soluble lytic murein transglycosylase L domain AU29_RS22670 PF01464 Transglycosylase SLT domain AU29_RS22675 PF01371 Trp repressor protein AU29_RS22680 PF01931 Protein of unknown function DUF84 AU29_RS22685 PF00300 Histidine phosphatase superfamily (branch 1) AU29_RS22690 PF12833 Helix-turn-helix domain AU29_RS22690 PF06445 GyrI-like small molecule binding domain AU29_RS22695 PF05981 CreA protein AU29_RS22700 PF00072 Response regulator receiver domain AU29_RS22700 PF00486 Transcriptional regulatory protein, C terminal AU29_RS22705 PF00512 His Kinase A (phospho-acceptor) domain AU29_RS22705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AU29_RS22705 PF00672 HAMP domain AU29_RS22710 PF06123 Inner membrane protein CreD AU29_RS22725 PF13953 PapC C-terminal domain AU29_RS22725 PF13954 PapC N-terminal domain AU29_RS22725 PF00577 Outer membrane usher protein AU29_RS22730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AU29_RS22730 PF02753 Pili assembly chaperone PapD, C-terminal domain AU29_RS22740 PF15977 Winged helix-turn-helix DNA binding AU29_RS22750 PF00072 Response regulator receiver domain AU29_RS22750 PF00486 Transcriptional regulatory protein, C terminal AU29_RS22760 PF00588 SpoU rRNA Methylase family