AU28_RS00005 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AU28_RS00005 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS00005 IPR004450 Threonine synthase-like AU28_RS00005 IPR029144 Threonine synthase, N-terminal AU28_RS00010 IPR001048 Aspartate/glutamate/uridylate kinase AU28_RS00010 IPR001341 Aspartate kinase domain AU28_RS00010 IPR001342 Homoserine dehydrogenase, catalytic AU28_RS00010 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AU28_RS00010 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I AU28_RS00010 IPR016040 NAD(P)-binding domain AU28_RS00010 IPR018042 Aspartate kinase, conserved site AU28_RS00010 IPR019811 Homoserine dehydrogenase, conserved site AU28_RS00010 IPR027795 GATS-like ACT domain AU28_RS00015 IPR000870 Homoserine kinase AU28_RS00015 IPR006203 GHMP kinase, ATP-binding, conserved site AU28_RS00015 IPR006204 GHMP kinase N-terminal domain AU28_RS00015 IPR013750 GHMP kinase, C-terminal domain AU28_RS00015 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS00015 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS00020 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AU28_RS00020 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS00020 IPR004450 Threonine synthase-like AU28_RS00020 IPR029144 Threonine synthase, N-terminal AU28_RS00025 IPR005583 Uncharacterised protein family UPF0246 AU28_RS00030 IPR001463 Sodium:alanine symporter AU28_RS00035 IPR001585 Transaldolase AU28_RS00035 IPR004730 Transaldolase type 1 AU28_RS00035 IPR013785 Aldolase-type TIM barrel AU28_RS00035 IPR018225 Transaldolase, active site AU28_RS00040 IPR001453 Molybdopterin binding domain AU28_RS00040 IPR008284 Molybdenum cofactor biosynthesis, conserved site AU28_RS00045 IPR000791 GPR1/FUN34/yaaH AU28_RS00050 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 AU28_RS00050 IPR025217 Domain of unknown function DUF3944 AU28_RS00055 IPR020240 Uncharacterised protein family UPF0412, YaaI AU28_RS00060 IPR012725 Chaperone DnaK AU28_RS00060 IPR013126 Heat shock protein 70 family AU28_RS00060 IPR018181 Heat shock protein 70, conserved site AU28_RS00060 IPR029047 Heat shock protein 70kD, peptide-binding domain AU28_RS00060 IPR029048 Heat shock protein 70kD, C-terminal domain AU28_RS00065 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AU28_RS00065 IPR001623 DnaJ domain AU28_RS00065 IPR002939 Chaperone DnaJ, C-terminal AU28_RS00065 IPR008971 HSP40/DnaJ peptide-binding AU28_RS00065 IPR012724 Chaperone DnaJ AU28_RS00065 IPR018253 DnaJ domain, conserved site AU28_RS00070 IPR000847 Transcription regulator HTH, LysR AU28_RS00070 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00075 IPR032126 AU28_RS00075 AU28_RS00080 IPR008565 Protein of unknown function DUF847 AU28_RS00080 IPR018537 Peptidoglycan binding domain AU28_RS00080 IPR023346 Lysozyme-like domain AU28_RS00085 IPR001867 Signal transduction response regulator, C-terminal AU28_RS00085 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00085 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS00090 IPR001223 Glycoside hydrolase, family 18, catalytic domain AU28_RS00090 IPR003610 Carbohydrate-binding module family 5/12 AU28_RS00090 IPR011583 Chitinase II AU28_RS00090 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS00090 IPR017853 Glycoside hydrolase, superfamily AU28_RS00090 IPR029070 Chitinase insertion domain AU28_RS00105 IPR000259 Fimbrial-type adhesion domain AU28_RS00105 IPR008966 Adhesion domain AU28_RS00110 IPR001829 Pili assembly chaperone, bacterial AU28_RS00110 IPR008962 PapD-like AU28_RS00110 IPR016147 PapD, N-terminal, bacterial AU28_RS00110 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS00115 IPR000015 Outer membrane usher protein AU28_RS00115 IPR018030 Fimbrial membrane usher, conserved site AU28_RS00115 IPR025885 PapC, N-terminal domain AU28_RS00115 IPR025949 PapC-like, C-terminal domain AU28_RS00120 IPR000259 Fimbrial-type adhesion domain AU28_RS00120 IPR008966 Adhesion domain AU28_RS00125 IPR000259 Fimbrial-type adhesion domain AU28_RS00125 IPR008966 Adhesion domain AU28_RS00130 IPR000259 Fimbrial-type adhesion domain AU28_RS00130 IPR008966 Adhesion domain AU28_RS00135 IPR001829 Pili assembly chaperone, bacterial AU28_RS00135 IPR008962 PapD-like AU28_RS00135 IPR016147 PapD, N-terminal, bacterial AU28_RS00135 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS00135 IPR018046 Pili assembly chaperone, conserved site AU28_RS00140 IPR001853 DSBA-like thioredoxin domain AU28_RS00140 IPR012336 Thioredoxin-like fold AU28_RS00150 IPR001867 Signal transduction response regulator, C-terminal AU28_RS00150 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00150 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS00155 IPR000847 Transcription regulator HTH, LysR AU28_RS00155 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00160 IPR001867 Signal transduction response regulator, C-terminal AU28_RS00160 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00160 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS00165 IPR010262 Arylsulfotransferase AU28_RS00170 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AU28_RS00170 IPR006146 5'-Nucleotidase, conserved site AU28_RS00170 IPR006179 5'-Nucleotidase/apyrase AU28_RS00170 IPR008334 5'-Nucleotidase, C-terminal AU28_RS00170 IPR029052 Metallo-dependent phosphatase-like AU28_RS00175 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like AU28_RS00180 IPR000917 Sulfatase AU28_RS00180 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS00180 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS00180 IPR024607 Sulfatase, conserved site AU28_RS00185 IPR007197 Radical SAM AU28_RS00185 IPR013785 Aldolase-type TIM barrel AU28_RS00185 IPR023867 Anaerobic sulphatase maturase, radical SAM AU28_RS00185 IPR023885 4Fe4S-binding SPASM domain AU28_RS00195 IPR010262 Arylsulfotransferase AU28_RS00200 IPR004670 Na+/H+ antiporter NhaA AU28_RS00200 IPR023171 Na/H antiporter domain AU28_RS00205 IPR000847 Transcription regulator HTH, LysR AU28_RS00205 IPR005119 LysR, substrate-binding AU28_RS00205 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00210 IPR000322 Glycoside hydrolase, family 31 AU28_RS00210 IPR011013 Galactose mutarotase-like domain AU28_RS00210 IPR017853 Glycoside hydrolase, superfamily AU28_RS00215 IPR001927 Sodium:galactoside symporter AU28_RS00215 IPR020846 Major facilitator superfamily domain AU28_RS00220 IPR002583 Ribosomal protein S20 AU28_RS00225 IPR020105 Uncharacterised protein family YaaY AU28_RS00230 IPR002606 Riboflavin kinase, bacterial AU28_RS00230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS00230 IPR015864 FAD synthetase AU28_RS00230 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic AU28_RS00230 IPR023465 Riboflavin kinase domain AU28_RS00230 IPR023468 Riboflavin kinase AU28_RS00235 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AU28_RS00235 IPR002300 Aminoacyl-tRNA synthetase, class Ia AU28_RS00235 IPR002301 Isoleucine-tRNA ligase AU28_RS00235 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AU28_RS00235 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AU28_RS00235 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase AU28_RS00235 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AU28_RS00235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS00235 IPR023585 Isoleucine-tRNA ligase, type 1 AU28_RS00240 IPR001872 Peptidase A8, signal peptidase II AU28_RS00245 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AU28_RS00245 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type AU28_RS00250 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase AU28_RS00265 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AU28_RS00265 IPR022976 Non-specific ribonucleoside hydrolase RihC AU28_RS00265 IPR023186 Inosine/uridine-preferring nucleoside hydrolase AU28_RS00270 IPR001789 Signal transduction response regulator, receiver domain AU28_RS00270 IPR011006 CheY-like superfamily AU28_RS00270 IPR024187 Signal transduction response regulator, citrate/malate metabolism AU28_RS00270 IPR028141 Transcriptional regulator AU28_RS00275 IPR000014 PAS domain AU28_RS00275 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS00275 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS00275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS00275 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB AU28_RS00275 IPR029151 Periplasmic sensor domain-like AU28_RS00275 IPR033463 AU28_RS00275 AU28_RS00280 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit AU28_RS00285 IPR000089 Biotin/lipoyl attachment AU28_RS00285 IPR000891 Pyruvate carboxyltransferase AU28_RS00285 IPR001882 Biotin-binding site AU28_RS00285 IPR003379 Carboxylase, conserved domain AU28_RS00285 IPR005776 Oxaloacetate decarboxylase, alpha subunit AU28_RS00285 IPR011053 Single hybrid motif AU28_RS00285 IPR013785 Aldolase-type TIM barrel AU28_RS00290 IPR005899 Sodium ion-translocating decarboxylase AU28_RS00290 IPR023424 Oxaloacetate decarboxylase gamma chain, probable AU28_RS00295 IPR004679 2-hydroxycarboxylate transporter AU28_RS00295 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes AU28_RS00300 IPR004821 Cytidyltransferase-like domain AU28_RS00300 IPR005216 Citrate lyase ligase AU28_RS00300 IPR013166 Citrate lyase ligase, C-terminal AU28_RS00300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS00300 IPR016181 Acyl-CoA N-acyltransferase AU28_RS00305 IPR006495 Citrate lyase acyl carrier protein CitD AU28_RS00305 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AU28_RS00310 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AU28_RS00310 IPR006475 Citrate lyase, beta subunit, bacteria AU28_RS00310 IPR011206 Citrate lyase beta subunit-like AU28_RS00310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS00315 IPR006472 Citrate lyase, alpha subunit AU28_RS00320 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AU28_RS00325 IPR002736 Triphosphoribosyl-dephospho-CoA protein AU28_RS00325 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG AU28_RS00330 IPR000846 Dihydrodipicolinate reductase, N-terminal AU28_RS00330 IPR016040 NAD(P)-binding domain AU28_RS00330 IPR022663 Dihydrodipicolinate reductase, C-terminal AU28_RS00330 IPR022664 Dihydrodipicolinate reductase, conserved site AU28_RS00330 IPR023940 Dihydrodipicolinate reductase, bacterial AU28_RS00335 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain AU28_RS00335 IPR006274 Carbamoyl-phosphate synthase, small subunit AU28_RS00335 IPR017926 Glutamine amidotransferase AU28_RS00335 IPR029062 Class I glutamine amidotransferase-like AU28_RS00340 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AU28_RS00340 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain AU28_RS00340 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain AU28_RS00340 IPR006275 Carbamoyl-phosphate synthase, large subunit AU28_RS00340 IPR011607 Methylglyoxal synthase-like domain AU28_RS00340 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS00340 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS00340 IPR016185 Pre-ATP-grasp domain AU28_RS00345 IPR020357 Transcription regulator CaiF AU28_RS00350 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS00350 IPR011004 Trimeric LpxA-like AU28_RS00350 IPR023446 Carnitine operon protein CaiE AU28_RS00355 IPR001753 Crotonase superfamily AU28_RS00355 IPR014748 Crontonase, C-terminal AU28_RS00355 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AU28_RS00355 IPR022852 Carnitinyl-CoA dehydratase AU28_RS00355 IPR029045 ClpP/crotonase-like domain AU28_RS00360 IPR000873 AMP-dependent synthetase/ligase AU28_RS00360 IPR020845 AMP-binding, conserved site AU28_RS00360 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC AU28_RS00360 IPR025110 AMP-binding enzyme C-terminal domain AU28_RS00365 IPR003673 CoA-transferase family III AU28_RS00365 IPR023452 CoA-transferase family III, crotonobetainyl-CoA:carnitine CoA-transferase CaiB AU28_RS00365 IPR023606 CoA-transferase family III domain AU28_RS00370 IPR006089 Acyl-CoA dehydrogenase, conserved site AU28_RS00370 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AU28_RS00370 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AU28_RS00370 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AU28_RS00370 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AU28_RS00370 IPR023450 Crotonobetainyl-CoA dehydrogenase CaiA AU28_RS00375 IPR000060 BCCT transporter family AU28_RS00375 IPR018093 BCCT transporter, conserved site AU28_RS00375 IPR023449 BCCT transporter family, L-carnitine/gamma-butyrobetaine antiporter CaiT AU28_RS00385 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site AU28_RS00385 IPR012255 Electron transfer flavoprotein, beta subunit AU28_RS00385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS00385 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AU28_RS00385 IPR023463 Electron transfer flavoprotein, FixA subunit, predicted AU28_RS00390 IPR001308 Electron transfer flavoprotein, alpha subunit AU28_RS00390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS00390 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AU28_RS00390 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AU28_RS00390 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site AU28_RS00390 IPR023461 Electron transfer flavoprotein, FixB subunit AU28_RS00390 IPR029035 DHS-like NAD/FAD-binding domain AU28_RS00395 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS00400 IPR007859 Electron transfer flavoprotein-ubiquinone oxidoreductase AU28_RS00400 IPR012206 Ferredoxin-like, FixX AU28_RS00405 IPR005828 General substrate transporter AU28_RS00405 IPR020846 Major facilitator superfamily domain AU28_RS00410 IPR010305 Protein of unknown function DUF903 AU28_RS00410 IPR010920 Like-Sm (LSM) domain AU28_RS00420 IPR010854 Domain of unknown function DUF1471 AU28_RS00420 IPR025543 Dodecin-like AU28_RS00430 IPR000917 Sulfatase AU28_RS00430 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS00430 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS00440 IPR003680 Flavodoxin-like fold AU28_RS00440 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF AU28_RS00440 IPR029039 Flavoprotein-like AU28_RS00445 IPR003148 Regulator of K+ conductance, N-terminal AU28_RS00445 IPR004771 K+/H+ exchanger AU28_RS00445 IPR006036 Potassium uptake protein TrkA AU28_RS00445 IPR006153 Cation/H+ exchanger AU28_RS00445 IPR016040 NAD(P)-binding domain AU28_RS00445 IPR023941 Glutathione-regulated potassium-efflux system protein KefC AU28_RS00450 IPR001796 Dihydrofolate reductase domain AU28_RS00450 IPR012259 Dihydrofolate reductase AU28_RS00450 IPR017925 Dihydrofolate reductase conserved site AU28_RS00450 IPR024072 Dihydrofolate reductase-like domain AU28_RS00455 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) AU28_RS00455 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AU28_RS00455 IPR029052 Metallo-dependent phosphatase-like AU28_RS00460 IPR007474 ApaG domain AU28_RS00460 IPR023065 Uncharacterised protein family ApaG AU28_RS00465 IPR001737 Ribosomal RNA adenine methylase transferase AU28_RS00465 IPR011530 Ribosomal RNA adenine dimethylase AU28_RS00465 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site AU28_RS00465 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AU28_RS00465 IPR023165 rRNA adenine dimethylase-like AU28_RS00465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS00470 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA AU28_RS00470 IPR024084 Isopropylmalate dehydrogenase-like domain AU28_RS00475 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AU28_RS00475 IPR008880 Trigger factor, C-terminal domain AU28_RS00475 IPR015391 SurA N-terminal AU28_RS00475 IPR023034 Peptidyl-prolyl isomerase SurA AU28_RS00475 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AU28_RS00475 IPR027304 Trigger factor/SurA domain AU28_RS00480 IPR005653 Organic solvent tolerance-like, N-terminal AU28_RS00480 IPR007543 Organic solvent tolerance protein, C-terminal AU28_RS00480 IPR020889 Lipopolysaccharide assembly, LptD AU28_RS00485 IPR001623 DnaJ domain AU28_RS00485 IPR007791 Heat shock protein DnaJ-like protein DjlA AU28_RS00485 IPR023749 DnaJ-like protein DjlA AU28_RS00485 IPR029024 TerB-like AU28_RS00490 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AU28_RS00490 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AU28_RS00490 IPR006225 Pseudouridine synthase, RluC/RluD AU28_RS00490 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS00495 IPR000330 SNF2-related AU28_RS00495 IPR001650 Helicase, C-terminal AU28_RS00495 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS00495 IPR022737 RNA polymerase recycling, bacterial, C-terminal AU28_RS00495 IPR023949 RNA polymerase-associated protein RapA AU28_RS00495 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS00500 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain AU28_RS00500 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain AU28_RS00500 IPR006172 DNA-directed DNA polymerase, family B AU28_RS00500 IPR012337 Ribonuclease H-like domain AU28_RS00500 IPR017964 DNA-directed DNA polymerase, family B, conserved site AU28_RS00500 IPR023211 DNA polymerase, palm domain AU28_RS00505 IPR003848 Domain of unknown function DUF218 AU28_RS00505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS00510 IPR031855 AU28_RS00510 AU28_RS00515 IPR001303 Class II aldolase/adducin N-terminal AU28_RS00515 IPR004661 L-ribulose-5-phosphate 4-epimerase AU28_RS00520 IPR003762 L-arabinose isomerase AU28_RS00520 IPR004216 L-fucose/L-arabinose isomerase, C-terminal AU28_RS00520 IPR009015 L-fucose isomerase, N-terminal/central domain AU28_RS00520 IPR024664 L-arabinose isomerase, C-terminal AU28_RS00525 IPR005929 L-ribulokinase AU28_RS00525 IPR018485 Carbohydrate kinase, FGGY, C-terminal AU28_RS00530 IPR003313 AraC-type arabinose-binding/dimerisation domain AU28_RS00530 IPR009057 Homeodomain-like AU28_RS00530 IPR018060 DNA binding HTH domain, AraC-type AU28_RS00530 IPR018062 HTH domain AraC-type, conserved site AU28_RS00530 IPR020449 Transcription regulator HTH, AraC- type AU28_RS00535 IPR032816 AU28_RS00535 AU28_RS00535 IPR032818 AU28_RS00535 AU28_RS00540 IPR003439 ABC transporter-like AU28_RS00540 IPR003593 AAA+ ATPase domain AU28_RS00540 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ AU28_RS00540 IPR017871 ABC transporter, conserved site AU28_RS00540 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS00545 IPR000515 MetI-like domain AU28_RS00545 IPR005947 Thiamine ABC transporter, permease protein AU28_RS00550 IPR005948 Thiamine ABC transporter periplasmic binding protein AU28_RS00550 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein AU28_RS00550 IPR006061 Bacterial extracellular solute-binding family 1, conserved site AU28_RS00555 IPR000914 Bacterial extracellular solute-binding protein, family 5 AU28_RS00555 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00555 IPR023767 Transcriptional regulator SgrR AU28_RS00555 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AU28_RS00560 IPR031767 AU28_RS00560 AU28_RS00570 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel AU28_RS00570 IPR004431 3-isopropylmalate dehydratase, small subunit AU28_RS00570 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AU28_RS00570 IPR015937 Aconitase/isopropylmalate dehydratase AU28_RS00575 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha AU28_RS00575 IPR004430 3-isopropylmalate dehydratase, large subunit AU28_RS00575 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AU28_RS00575 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 AU28_RS00575 IPR015937 Aconitase/isopropylmalate dehydratase AU28_RS00575 IPR018136 Aconitase family, 4Fe-4S cluster binding site AU28_RS00580 IPR001804 Isocitrate and isopropylmalate dehydrogenases family AU28_RS00580 IPR004429 Isopropylmalate dehydrogenase AU28_RS00580 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AU28_RS00580 IPR024084 Isopropylmalate dehydrogenase-like domain AU28_RS00585 IPR000891 Pyruvate carboxyltransferase AU28_RS00585 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AU28_RS00585 IPR005671 2-isopropylmalate synthase, bacterial-type AU28_RS00585 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AU28_RS00585 IPR013785 Aldolase-type TIM barrel AU28_RS00590 IPR012570 Leucine operon leader peptide AU28_RS00595 IPR000847 Transcription regulator HTH, LysR AU28_RS00595 IPR005119 LysR, substrate-binding AU28_RS00595 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00600 IPR000399 TPP-binding enzyme, conserved site AU28_RS00600 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AU28_RS00600 IPR012000 Thiamine pyrophosphate enzyme, central domain AU28_RS00600 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AU28_RS00600 IPR012846 Acetolactate synthase, large subunit, biosynthetic AU28_RS00600 IPR029035 DHS-like NAD/FAD-binding domain AU28_RS00600 IPR029061 Thiamin diphosphate-binding fold AU28_RS00605 IPR004789 Acetolactate synthase, small subunit AU28_RS00605 IPR019455 Acetolactate synthase, small subunit, C-terminal AU28_RS00610 IPR000843 Transcription regulator HTH, LacI AU28_RS00610 IPR001761 Periplasmic binding protein/LacI sugar binding domain AU28_RS00610 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS00610 IPR012781 D-fructose-responsive transcription factor AU28_RS00610 IPR028082 Periplasmic binding protein-like I AU28_RS00615 IPR003444 MraZ AU28_RS00615 IPR020603 MraZ domain AU28_RS00620 IPR002903 Ribosomal RNA small subunit methyltransferase H AU28_RS00620 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain AU28_RS00620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS00625 IPR011922 Cell division protein FtsL AU28_RS00630 IPR001460 Penicillin-binding protein, transpeptidase AU28_RS00630 IPR005311 Penicillin-binding protein, dimerisation domain AU28_RS00630 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS00635 IPR000713 Mur ligase, N-terminal AU28_RS00635 IPR004101 Mur ligase, C-terminal AU28_RS00635 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase AU28_RS00635 IPR013221 Mur ligase, central AU28_RS00640 IPR000713 Mur ligase, N-terminal AU28_RS00640 IPR004101 Mur ligase, C-terminal AU28_RS00640 IPR005863 UDP-MurNAc-pentapeptide synthetase AU28_RS00640 IPR013221 Mur ligase, central AU28_RS00645 IPR000715 Glycosyl transferase, family 4 AU28_RS00645 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase AU28_RS00645 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site AU28_RS00650 IPR004101 Mur ligase, C-terminal AU28_RS00650 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase AU28_RS00650 IPR013221 Mur ligase, central AU28_RS00650 IPR016040 NAD(P)-binding domain AU28_RS00655 IPR001182 Cell cycle protein FtsW/RodA AU28_RS00655 IPR013437 Cell division protein FtsW AU28_RS00655 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AU28_RS00660 IPR004276 Glycosyl transferase, family 28 AU28_RS00660 IPR006009 N-acetylglucosaminyltransferase, MurG AU28_RS00660 IPR007235 Glycosyl transferase, family 28, C-terminal AU28_RS00665 IPR000713 Mur ligase, N-terminal AU28_RS00665 IPR004101 Mur ligase, C-terminal AU28_RS00665 IPR005758 UDP-N-acetylmuramate-alanine ligase AU28_RS00665 IPR013221 Mur ligase, central AU28_RS00665 IPR016040 NAD(P)-binding domain AU28_RS00670 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AU28_RS00670 IPR005905 D-alanine--D-alanine ligase AU28_RS00670 IPR011095 D-alanine--D-alanine ligase, C-terminal AU28_RS00670 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AU28_RS00670 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS00670 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS00670 IPR016185 Pre-ATP-grasp domain AU28_RS00675 IPR005548 Cell division protein FtsQ/DivIB AU28_RS00675 IPR013685 Polypeptide-transport-associated, FtsQ-type AU28_RS00675 IPR026579 Cell division protein FtsQ AU28_RS00680 IPR003494 SHS2 domain inserted in FtsA AU28_RS00680 IPR020823 Cell division protein FtsA AU28_RS00685 IPR000158 Cell division protein FtsZ AU28_RS00685 IPR003008 Tubulin/FtsZ, GTPase domain AU28_RS00685 IPR008280 Tubulin/FtsZ, C-terminal AU28_RS00685 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AU28_RS00685 IPR020805 Cell division protein FtsZ, conserved site AU28_RS00685 IPR024757 Cell division protein FtsZ, C-terminal AU28_RS00690 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase AU28_RS00690 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal AU28_RS00690 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal AU28_RS00690 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS00695 IPR009502 Secretion monitor AU28_RS00700 IPR000185 Protein translocase subunit SecA AU28_RS00700 IPR004027 SEC-C motif AU28_RS00700 IPR011115 SecA DEAD-like, N-terminal AU28_RS00700 IPR011116 SecA Wing/Scaffold AU28_RS00700 IPR011130 SecA preprotein, cross-linking domain AU28_RS00700 IPR020937 SecA conserved site AU28_RS00700 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS00705 IPR000086 NUDIX hydrolase domain AU28_RS00705 IPR003561 Mutator MutT AU28_RS00705 IPR015797 NUDIX hydrolase domain-like AU28_RS00705 IPR020084 NUDIX hydrolase, conserved site AU28_RS00705 IPR020476 NUDIX hydrolase AU28_RS00710 IPR001395 Aldo/keto reductase AU28_RS00710 IPR023210 NADP-dependent oxidoreductase domain AU28_RS00715 IPR000847 Transcription regulator HTH, LysR AU28_RS00715 IPR005119 LysR, substrate-binding AU28_RS00715 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00720 IPR005584 DNA gyrase inhibitor YacG AU28_RS00720 IPR013088 Zinc finger, NHR/GATA-type AU28_RS00725 IPR009777 Cell division protein ZapD AU28_RS00725 IPR027462 Z ring-associated protein D, C-terminal domain AU28_RS00730 IPR001977 Dephospho-CoA kinase AU28_RS00730 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS00735 IPR001093 IMP dehydrogenase/GMP reductase AU28_RS00735 IPR005993 Guanosine monophosphate reductase 1 AU28_RS00735 IPR013785 Aldolase-type TIM barrel AU28_RS00735 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AU28_RS00740 IPR003004 GspF/PilC family AU28_RS00740 IPR018076 Type II secretion system F domain AU28_RS00745 IPR001482 Type II secretion system protein E AU28_RS00745 IPR007831 General secretory system II, protein E, N-terminal AU28_RS00745 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS00750 IPR012902 Prokaryotic N-terminal methylation site AU28_RS00755 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AU28_RS00755 IPR004393 Nicotinate-nucleotide pyrophosphorylase AU28_RS00755 IPR013785 Aldolase-type TIM barrel AU28_RS00755 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AU28_RS00755 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AU28_RS00760 IPR002502 N-acetylmuramoyl-L-alanine amidase domain AU28_RS00765 IPR031347 AU28_RS00765 AU28_RS00770 IPR006710 Glycoside hydrolase, family 43 AU28_RS00770 IPR016828 Alpha-L-arabinofuranosidase AU28_RS00770 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AU28_RS00775 IPR001927 Sodium:galactoside symporter AU28_RS00775 IPR020846 Major facilitator superfamily domain AU28_RS00780 IPR002293 Amino acid/polyamine transporter I AU28_RS00780 IPR004840 Amino acid permease, conserved site AU28_RS00780 IPR004841 Amino acid permease/ SLC12A domain AU28_RS00785 IPR000524 Transcription regulator HTH, GntR AU28_RS00785 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS00785 IPR011711 GntR, C-terminal AU28_RS00785 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00790 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type AU28_RS00790 IPR005474 Transketolase, N-terminal AU28_RS00790 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AU28_RS00790 IPR029061 Thiamin diphosphate-binding fold AU28_RS00790 IPR033247 AU28_RS00790 AU28_RS00795 IPR000089 Biotin/lipoyl attachment AU28_RS00795 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AU28_RS00795 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AU28_RS00795 IPR004167 E3 binding AU28_RS00795 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex AU28_RS00795 IPR011053 Single hybrid motif AU28_RS00795 IPR023213 Chloramphenicol acetyltransferase-like domain AU28_RS00800 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AU28_RS00800 IPR006258 Dihydrolipoamide dehydrogenase AU28_RS00800 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AU28_RS00800 IPR016156 FAD/NAD-linked reductase, dimerisation domain AU28_RS00800 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS00810 IPR021556 Protein of unknown function DUF2950 AU28_RS00815 IPR021728 Protein of unknown function DUF3300 AU28_RS00820 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha AU28_RS00820 IPR004406 Aconitase B, bacterial AU28_RS00820 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AU28_RS00820 IPR015929 Aconitase B, N-terminal, bacterial AU28_RS00820 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AU28_RS00820 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 AU28_RS00820 IPR015933 Aconitase B, HEAT-like, bacterial AU28_RS00820 IPR015937 Aconitase/isopropylmalate dehydratase AU28_RS00820 IPR018136 Aconitase family, 4Fe-4S cluster binding site AU28_RS00825 IPR020222 Inner membrane CbrB AU28_RS00830 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 AU28_RS00830 IPR023485 Phosphotyrosine protein phosphatase I superfamily AU28_RS00835 IPR008249 Uncharacterised protein family UPF0231 AU28_RS00840 IPR004684 2-keto-3-deoxygluconate permease AU28_RS00845 IPR010737 Protein of unknown function, DUF1537 AU28_RS00845 IPR031475 AU28_RS00845 AU28_RS00850 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA AU28_RS00850 IPR024084 Isopropylmalate dehydrogenase-like domain AU28_RS00855 IPR001034 HTH DeoR N-terminal domain AU28_RS00855 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS00855 IPR014036 DeoR C-terminal sensor domain AU28_RS00855 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS00860 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic AU28_RS00860 IPR009165 S-adenosylmethionine decarboxylase, bacterial AU28_RS00860 IPR016067 S-adenosylmethionine decarboxylase, core AU28_RS00865 IPR001045 Spermidine/spermine synthases family AU28_RS00865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS00865 IPR030373 AU28_RS00865 AU28_RS00870 IPR019114 Chaperone lipoprotein, PulS/OutS-like AU28_RS00875 IPR001117 Multicopper oxidase, type 1 AU28_RS00875 IPR002355 Multicopper oxidase, copper-binding site AU28_RS00875 IPR008972 Cupredoxin AU28_RS00875 IPR011706 Multicopper oxidase, type 2 AU28_RS00875 IPR011707 Multicopper oxidase, type 3 AU28_RS00880 IPR001479 Quinoprotein dehydrogenase, conserved site AU28_RS00880 IPR002372 Pyrrolo-quinoline quinone repeat AU28_RS00880 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily AU28_RS00880 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related AU28_RS00880 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AU28_RS00880 IPR027295 Quinonprotein alcohol dehydrogenase-like domain AU28_RS00885 IPR000836 Phosphoribosyltransferase domain AU28_RS00885 IPR005904 Hypoxanthine phosphoribosyl transferase AU28_RS00885 IPR029057 Phosphoribosyltransferase-like AU28_RS00890 IPR001765 Carbonic anhydrase AU28_RS00890 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site AU28_RS00895 IPR003439 ABC transporter-like AU28_RS00895 IPR003593 AAA+ ATPase domain AU28_RS00895 IPR017871 ABC transporter, conserved site AU28_RS00895 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS00900 IPR000412 ABC-2 transporter AU28_RS00900 IPR013525 ABC-2 type transporter AU28_RS00905 IPR000259 Fimbrial-type adhesion domain AU28_RS00905 IPR008966 Adhesion domain AU28_RS00910 IPR000015 Outer membrane usher protein AU28_RS00910 IPR025885 PapC, N-terminal domain AU28_RS00910 IPR025949 PapC-like, C-terminal domain AU28_RS00915 IPR001829 Pili assembly chaperone, bacterial AU28_RS00915 IPR008962 PapD-like AU28_RS00915 IPR016147 PapD, N-terminal, bacterial AU28_RS00915 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS00920 IPR000259 Fimbrial-type adhesion domain AU28_RS00920 IPR008966 Adhesion domain AU28_RS00925 IPR004701 Phosphotransferase system, mannose-type IIA component AU28_RS00930 IPR002509 Polysaccharide deacetylase AU28_RS00930 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AU28_RS00935 IPR003190 Aspartate decarboxylase AU28_RS00935 IPR009010 Aspartate decarboxylase-like domain AU28_RS00940 IPR003721 Pantoate-beta-alanine ligase AU28_RS00940 IPR004821 Cytidyltransferase-like domain AU28_RS00940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS00945 IPR003700 Ketopantoate hydroxymethyltransferase AU28_RS00945 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS00950 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AU28_RS00955 IPR002646 Poly A polymerase, head domain AU28_RS00955 IPR010206 Poly(A) polymerase I AU28_RS00955 IPR025866 Polymerase A arginine-rich C-terminal domain AU28_RS00955 IPR032828 AU28_RS00955 AU28_RS00960 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AU28_RS00960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS00960 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AU28_RS00960 IPR022380 Glutamyl-Q tRNA(Asp) synthetase AU28_RS00965 IPR000962 Zinc finger, DksA/TraR C4-type AU28_RS00965 IPR012784 RNA polymerase-binding transcription factor DksA AU28_RS00965 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AU28_RS00965 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AU28_RS00970 IPR005224 Sugar fermentation stimulation protein AU28_RS00975 IPR004175 2',5' RNA ligase AU28_RS00975 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AU28_RS00975 IPR014051 Phosphoesterase, HXTX AU28_RS00980 IPR001650 Helicase, C-terminal AU28_RS00980 IPR007502 Helicase-associated domain AU28_RS00980 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AU28_RS00980 IPR011545 DEAD/DEAH box helicase domain AU28_RS00980 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal AU28_RS00980 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS00980 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS00985 IPR001264 Glycosyl transferase, family 51 AU28_RS00985 IPR001460 Penicillin-binding protein, transpeptidase AU28_RS00985 IPR011813 Penicillin-binding protein 1B AU28_RS00985 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS00985 IPR023346 Lysozyme-like domain AU28_RS00985 IPR028166 Bifunctional transglycosylase second domain AU28_RS00985 IPR032730 AU28_RS00985 AU28_RS00990 IPR000531 TonB-dependent receptor, beta-barrel AU28_RS00990 IPR010105 TonB-dependent siderophore receptor AU28_RS00990 IPR010916 TonB box, conserved site AU28_RS00990 IPR010917 TonB-dependent receptor, conserved site AU28_RS00990 IPR012910 TonB-dependent receptor, plug AU28_RS00995 IPR003439 ABC transporter-like AU28_RS00995 IPR003593 AAA+ ATPase domain AU28_RS00995 IPR017871 ABC transporter, conserved site AU28_RS00995 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS01000 IPR002491 ABC transporter periplasmic binding domain AU28_RS01000 IPR008091 Ferrichrome-binding periplasmic protein AU28_RS01005 IPR000522 ABC transporter, permease protein AU28_RS01005 IPR029022 ABC transporter, BtuC-like AU28_RS01010 IPR000259 Fimbrial-type adhesion domain AU28_RS01010 IPR008966 Adhesion domain AU28_RS01015 IPR000015 Outer membrane usher protein AU28_RS01015 IPR018030 Fimbrial membrane usher, conserved site AU28_RS01015 IPR025885 PapC, N-terminal domain AU28_RS01015 IPR025949 PapC-like, C-terminal domain AU28_RS01020 IPR001829 Pili assembly chaperone, bacterial AU28_RS01020 IPR008962 PapD-like AU28_RS01020 IPR016147 PapD, N-terminal, bacterial AU28_RS01020 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS01020 IPR018046 Pili assembly chaperone, conserved site AU28_RS01025 IPR000259 Fimbrial-type adhesion domain AU28_RS01025 IPR008966 Adhesion domain AU28_RS01030 IPR000259 Fimbrial-type adhesion domain AU28_RS01030 IPR008966 Adhesion domain AU28_RS01035 IPR000259 Fimbrial-type adhesion domain AU28_RS01035 IPR008966 Adhesion domain AU28_RS01040 IPR021407 Protein of unknown function DUF2544 AU28_RS01045 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AU28_RS01045 IPR005814 Aminotransferase class-III AU28_RS01045 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS01045 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS01045 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS01050 IPR001807 Chloride channel, voltage gated AU28_RS01050 IPR014743 Chloride channel, core AU28_RS01050 IPR023861 Chloride channel, ClcA AU28_RS01055 IPR000361 FeS cluster biogenesis AU28_RS01055 IPR016092 FeS cluster insertion protein AU28_RS01055 IPR017870 FeS cluster insertion, C-terminal, conserved site AU28_RS01055 IPR023063 Iron-sulfur cluster insertion protein ErpA AU28_RS01060 IPR005115 Uncharacterised domain UPF0126 AU28_RS01065 IPR002491 ABC transporter periplasmic binding domain AU28_RS01065 IPR023544 ABC transporter, vitamin B12-binding protein AU28_RS01070 IPR000845 Nucleoside phosphorylase domain AU28_RS01070 IPR010049 MTA/SAH nucleosidase AU28_RS01070 IPR018017 Nucleoside phosphorylase AU28_RS01075 IPR003607 HD/PDEase domain AU28_RS01075 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase AU28_RS01075 IPR006674 HD domain AU28_RS01075 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria AU28_RS01075 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain AU28_RS01075 IPR026875 Phosphohydrolase-associated domain AU28_RS01075 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain AU28_RS01080 IPR001478 PDZ domain AU28_RS01080 IPR001940 Peptidase S1C AU28_RS01080 IPR009003 Trypsin-like cysteine/serine peptidase domain AU28_RS01080 IPR011782 Peptidase S1C, Do AU28_RS01085 IPR008599 Putative sugar diacid recognition AU28_RS01085 IPR009057 Homeodomain-like AU28_RS01085 IPR025736 PucR C-terminal helix-turn-helix domain AU28_RS01090 IPR004954 Peptidase M60, viral enhancin protein AU28_RS01090 IPR031161 AU28_RS01090 AU28_RS01095 IPR020911 Uncharacterised protein family UPF0325 AU28_RS01100 IPR005828 General substrate transporter AU28_RS01100 IPR020846 Major facilitator superfamily domain AU28_RS01105 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS01105 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family AU28_RS01105 IPR011004 Trimeric LpxA-like AU28_RS01105 IPR018357 Hexapeptide transferase, conserved site AU28_RS01105 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 AU28_RS01110 IPR002912 ACT domain AU28_RS01110 IPR002934 Nucleotidyl transferase domain AU28_RS01110 IPR003607 HD/PDEase domain AU28_RS01110 IPR006674 HD domain AU28_RS01110 IPR010043 Protein-PII uridylyltransferase AU28_RS01110 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AU28_RS01115 IPR000994 Peptidase M24, structural domain AU28_RS01115 IPR001714 Peptidase M24, methionine aminopeptidase AU28_RS01115 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AU28_RS01120 IPR001865 Ribosomal protein S2 AU28_RS01120 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid AU28_RS01120 IPR018130 Ribosomal protein S2, conserved site AU28_RS01120 IPR023591 Ribosomal protein S2, flavodoxin-like domain AU28_RS01125 IPR001816 Translation elongation factor EFTs/EF1B AU28_RS01125 IPR009060 UBA-like AU28_RS01125 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation AU28_RS01125 IPR018101 Translation elongation factor Ts, conserved site AU28_RS01130 IPR001048 Aspartate/glutamate/uridylate kinase AU28_RS01130 IPR011817 Uridylate kinase AU28_RS01130 IPR015963 Uridylate kinase, bacteria AU28_RS01135 IPR002661 Ribosome recycling factor AU28_RS01135 IPR023584 Ribosome recycling factor domain AU28_RS01140 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase AU28_RS01140 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal AU28_RS01140 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal AU28_RS01140 IPR016040 NAD(P)-binding domain AU28_RS01140 IPR026877 DXP reductoisomerase C-terminal domain AU28_RS01145 IPR001441 Decaprenyl diphosphate synthase-like AU28_RS01145 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AU28_RS01150 IPR000374 Phosphatidate cytidylyltransferase AU28_RS01155 IPR001478 PDZ domain AU28_RS01155 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase AU28_RS01155 IPR008915 Peptidase M50 AU28_RS01160 IPR000184 Bacterial surface antigen (D15) AU28_RS01160 IPR010827 Surface antigen variable number AU28_RS01160 IPR023707 Outer membrane protein assembly factor BamA AU28_RS01165 IPR005632 Chaperone protein Skp AU28_RS01165 IPR024930 Skp domain AU28_RS01170 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS01170 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase AU28_RS01170 IPR011004 Trimeric LpxA-like AU28_RS01170 IPR018357 Hexapeptide transferase, conserved site AU28_RS01170 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region AU28_RS01175 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ AU28_RS01175 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AU28_RS01175 IPR029069 HotDog domain AU28_RS01180 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS01180 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase AU28_RS01180 IPR011004 Trimeric LpxA-like AU28_RS01180 IPR018357 Hexapeptide transferase, conserved site AU28_RS01180 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal AU28_RS01185 IPR003835 Glycosyl transferase, family 19 AU28_RS01190 IPR001352 Ribonuclease HII/HIII AU28_RS01190 IPR012337 Ribonuclease H-like domain AU28_RS01190 IPR022898 Ribonuclease HII AU28_RS01190 IPR024567 Ribonuclease HII/HIII domain AU28_RS01195 IPR003141 Polymerase/histidinol phosphatase, N-terminal AU28_RS01195 IPR004013 PHP, C-terminal AU28_RS01195 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AU28_RS01195 IPR004805 DNA polymerase III, alpha subunit AU28_RS01195 IPR011708 Bacterial DNA polymerase III, alpha subunit AU28_RS01195 IPR012340 Nucleic acid-binding, OB-fold AU28_RS01195 IPR016195 Polymerase/histidinol phosphatase-like AU28_RS01195 IPR029460 DNA polymerase, helix-hairpin-helix motif AU28_RS01200 IPR001095 Acetyl-CoA carboxylase, alpha subunit AU28_RS01200 IPR029045 ClpP/crotonase-like domain AU28_RS01205 IPR000601 PKD domain AU28_RS01205 IPR000726 Glycoside hydrolase, family 19, catalytic AU28_RS01205 IPR003610 Carbohydrate-binding module family 5/12 AU28_RS01205 IPR022409 PKD/Chitinase domain AU28_RS01205 IPR023346 Lysozyme-like domain AU28_RS01210 IPR000310 Orn/Lys/Arg decarboxylase, major domain AU28_RS01210 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal AU28_RS01210 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal AU28_RS01210 IPR011193 Ornithine/lysine/arginine decarboxylase AU28_RS01210 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS01210 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS01210 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS01215 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AU28_RS01215 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AU28_RS01220 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase AU28_RS01220 IPR012094 Lysidine-tRNA(Ile) synthetase AU28_RS01220 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal AU28_RS01220 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal AU28_RS01220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS01220 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain AU28_RS01220 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AU28_RS01225 IPR009778 Modulator of Rho-dependent transcription termination AU28_RS01225 IPR023534 Rof/RNase P-like AU28_RS01230 IPR009624 Uncharacterised protein family UPF0253 AU28_RS01235 IPR009822 YaeQ AU28_RS01235 IPR011335 Restriction endonuclease type II-like AU28_RS01240 IPR000352 Peptide chain release factor class I/class II AU28_RS01245 IPR007298 Copper resistance lipoprotein NlpE AU28_RS01245 IPR033450 AU28_RS01245 AU28_RS01250 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain AU28_RS01250 IPR002316 Proline-tRNA ligase, class IIa AU28_RS01250 IPR004154 Anticodon-binding AU28_RS01250 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type AU28_RS01250 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AU28_RS01250 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 AU28_RS01255 IPR023368 Uncharacterised protein family UPF0066, conserved site AU28_RS01255 IPR023370 TsaA-like domain AU28_RS01260 IPR030852 AU28_RS01260 AU28_RS01265 IPR004872 Lipoprotein NlpA family AU28_RS01270 IPR000515 MetI-like domain AU28_RS01275 IPR003439 ABC transporter-like AU28_RS01275 IPR003593 AAA+ ATPase domain AU28_RS01275 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria AU28_RS01275 IPR017871 ABC transporter, conserved site AU28_RS01275 IPR018449 NIL domain AU28_RS01275 IPR026253 Methionine import ATP-binding protein MetN AU28_RS01275 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS01280 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase AU28_RS01280 IPR006543 Histidinol-phosphate phosphatase AU28_RS01280 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AU28_RS01280 IPR023214 HAD-like domain AU28_RS01315 IPR001395 Aldo/keto reductase AU28_RS01315 IPR018170 Aldo/keto reductase, conserved site AU28_RS01315 IPR020471 Aldo/keto reductase subgroup AU28_RS01315 IPR023210 NADP-dependent oxidoreductase domain AU28_RS01320 IPR000847 Transcription regulator HTH, LysR AU28_RS01320 IPR005119 LysR, substrate-binding AU28_RS01320 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS01325 IPR011701 Major facilitator superfamily AU28_RS01325 IPR020846 Major facilitator superfamily domain AU28_RS01330 IPR005135 Endonuclease/exonuclease/phosphatase AU28_RS01330 IPR022958 Uncharacterised protein family UPF0294 AU28_RS01335 IPR013216 Methyltransferase type 11 AU28_RS01335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS01340 IPR000189 Prokaryotic transglycosylase, active site AU28_RS01340 IPR008258 Lytic transglycosylase-like SLT domain AU28_RS01340 IPR018392 LysM domain AU28_RS01340 IPR023346 Lysozyme-like domain AU28_RS01345 IPR001279 Beta-lactamase-like AU28_RS01345 IPR017782 Hydroxyacylglutathione hydrolase AU28_RS01345 IPR032282 AU28_RS01345 AU28_RS01350 IPR013216 Methyltransferase type 11 AU28_RS01350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS01355 IPR002156 Ribonuclease H domain AU28_RS01355 IPR012337 Ribonuclease H-like domain AU28_RS01355 IPR022892 Ribonuclease H AU28_RS01360 IPR006054 DNA polymerase III, epsilon subunit AU28_RS01360 IPR006309 DNA polymerase 3, epsilon subunit AU28_RS01360 IPR012337 Ribonuclease H-like domain AU28_RS01360 IPR013520 Exonuclease, RNase T/DNA polymerase III AU28_RS01375 IPR010657 ImpA, N-terminal AU28_RS01380 IPR010732 Protein of unknown function DUF1305 AU28_RS01385 IPR018696 Protein of unknown function DUF2195 AU28_RS01390 IPR021225 Protein of unknown function DUF2778 AU28_RS01400 IPR001826 RHS protein AU28_RS01400 IPR006530 YD repeat AU28_RS01400 IPR022385 Rhs repeat-associated core AU28_RS01400 IPR031325 AU28_RS01400 AU28_RS01410 IPR014944 Toxin SymE-like AU28_RS01430 IPR014944 Toxin SymE-like AU28_RS01435 IPR001584 Integrase, catalytic core AU28_RS01435 IPR012337 Ribonuclease H-like domain AU28_RS01440 IPR008966 Adhesion domain AU28_RS01440 IPR018569 Saf-pilin pilus formation protein AU28_RS01445 IPR001829 Pili assembly chaperone, bacterial AU28_RS01445 IPR008962 PapD-like AU28_RS01445 IPR016147 PapD, N-terminal, bacterial AU28_RS01445 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS01445 IPR018046 Pili assembly chaperone, conserved site AU28_RS01450 IPR000015 Outer membrane usher protein AU28_RS01450 IPR025885 PapC, N-terminal domain AU28_RS01450 IPR025949 PapC-like, C-terminal domain AU28_RS01455 IPR008394 Enterobacteria AfaD invasin AU28_RS01455 IPR008966 Adhesion domain AU28_RS01460 IPR002509 Polysaccharide deacetylase AU28_RS01460 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AU28_RS01465 IPR009277 PerC transcriptional activator AU28_RS01465 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 AU28_RS01470 IPR000847 Transcription regulator HTH, LysR AU28_RS01470 IPR005119 LysR, substrate-binding AU28_RS01470 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS01480 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS01480 IPR027385 Outer membrane protein beta-barrel AU28_RS01490 IPR003010 Carbon-nitrogen hydrolase AU28_RS01495 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AU28_RS01495 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AU28_RS01495 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AU28_RS01495 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AU28_RS01495 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type AU28_RS01500 IPR001347 Sugar isomerase (SIS) AU28_RS01500 IPR004515 Phosphoheptose isomerase AU28_RS01505 IPR026869 Putative glutamine amidotransferase type 2 AU28_RS01505 IPR029055 Nucleophile aminohydrolases, N-terminal AU28_RS01510 IPR005490 L,D-transpeptidase catalytic domain AU28_RS01515 IPR001126 DNA-repair protein, UmuC-like AU28_RS01515 IPR017961 DNA polymerase, Y-family, little finger domain AU28_RS01515 IPR022880 DNA polymerase IV AU28_RS01515 IPR024728 DNA polymerase type-Y, HhH motif AU28_RS01520 IPR001233 tRNA-splicing ligase, RtcB AU28_RS01520 IPR017510 Release factor H-coupled RctB family protein AU28_RS01525 IPR000352 Peptide chain release factor class I/class II AU28_RS01525 IPR014720 Double-stranded RNA-binding domain AU28_RS01525 IPR017509 Putative peptide chain release factor H AU28_RS01530 IPR001160 Peptidase M20C, Xaa-His dipeptidase AU28_RS01530 IPR002933 Peptidase M20 AU28_RS01530 IPR011650 Peptidase M20, dimerisation domain AU28_RS01535 IPR000836 Phosphoribosyltransferase domain AU28_RS01535 IPR023747 Xanthine-guanine phosphoribosyltransferase AU28_RS01535 IPR029057 Phosphoribosyltransferase-like AU28_RS01540 IPR010520 Protein of unknown function DUF1100, hydrolase-like AU28_RS01540 IPR029058 Alpha/Beta hydrolase fold AU28_RS01545 IPR009986 Sigma factor-binding protein Crl AU28_RS01550 IPR001702 Porin, Gram-negative type AU28_RS01550 IPR001897 Porin, gammaproteobacterial AU28_RS01550 IPR013793 Porin, Gram-negative type, conserved site AU28_RS01550 IPR023614 Porin domain AU28_RS01555 IPR001048 Aspartate/glutamate/uridylate kinase AU28_RS01555 IPR001057 Glutamate/acetylglutamate kinase AU28_RS01555 IPR002478 PUA domain AU28_RS01555 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase AU28_RS01555 IPR011529 Glutamate 5-kinase AU28_RS01555 IPR015947 PUA-like domain AU28_RS01555 IPR019797 Glutamate 5-kinase, conserved site AU28_RS01560 IPR000965 Gamma-glutamyl phosphate reductase GPR AU28_RS01560 IPR012134 Glutamate-5-semialdehyde dehydrogenase AU28_RS01560 IPR015590 Aldehyde dehydrogenase domain AU28_RS01560 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS01560 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS01560 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS01560 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site AU28_RS01570 IPR025948 HTH-like domain AU28_RS01575 IPR002514 Transposase IS3/IS911family AU28_RS01575 IPR009057 Homeodomain-like AU28_RS01580 IPR030994 AU28_RS01580 AU28_RS01585 IPR015079 Protein of unknown function DUF1889 AU28_RS01590 IPR005829 Sugar transporter, conserved site AU28_RS01590 IPR011701 Major facilitator superfamily AU28_RS01590 IPR020846 Major facilitator superfamily domain AU28_RS01595 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha AU28_RS01595 IPR004430 3-isopropylmalate dehydratase, large subunit AU28_RS01595 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AU28_RS01595 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 AU28_RS01595 IPR015937 Aconitase/isopropylmalate dehydratase AU28_RS01595 IPR018136 Aconitase family, 4Fe-4S cluster binding site AU28_RS01600 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel AU28_RS01600 IPR004431 3-isopropylmalate dehydratase, small subunit AU28_RS01600 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AU28_RS01600 IPR015937 Aconitase/isopropylmalate dehydratase AU28_RS01605 IPR011234 Fumarylacetoacetase, C-terminal-related AU28_RS01610 IPR000073 Alpha/beta hydrolase fold-1 AU28_RS01610 IPR029058 Alpha/Beta hydrolase fold AU28_RS01615 IPR000847 Transcription regulator HTH, LysR AU28_RS01615 IPR005119 LysR, substrate-binding AU28_RS01615 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS01630 IPR001829 Pili assembly chaperone, bacterial AU28_RS01630 IPR008962 PapD-like AU28_RS01630 IPR016147 PapD, N-terminal, bacterial AU28_RS01630 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS01630 IPR018046 Pili assembly chaperone, conserved site AU28_RS01635 IPR000259 Fimbrial-type adhesion domain AU28_RS01635 IPR008966 Adhesion domain AU28_RS01635 IPR011228 Uncharacterised conserved protein UCP029766 AU28_RS01640 IPR000015 Outer membrane usher protein AU28_RS01640 IPR018030 Fimbrial membrane usher, conserved site AU28_RS01640 IPR025885 PapC, N-terminal domain AU28_RS01640 IPR025949 PapC-like, C-terminal domain AU28_RS01645 IPR001829 Pili assembly chaperone, bacterial AU28_RS01645 IPR008962 PapD-like AU28_RS01645 IPR016147 PapD, N-terminal, bacterial AU28_RS01645 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS01645 IPR018046 Pili assembly chaperone, conserved site AU28_RS01650 IPR000259 Fimbrial-type adhesion domain AU28_RS01650 IPR008966 Adhesion domain AU28_RS01655 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS01655 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS01665 IPR001633 EAL domain AU28_RS01665 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AU28_RS01670 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS01670 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS01680 IPR000758 Virulence-related outer membrane protein AU28_RS01680 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS01680 IPR027385 Outer membrane protein beta-barrel AU28_RS01685 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS01685 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS01695 IPR025294 Protein of unknown function DUF4156 AU28_RS01700 IPR003423 Outer membrane efflux protein AU28_RS01700 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AU28_RS01705 IPR001036 Acriflavin resistance protein AU28_RS01705 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AU28_RS01705 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AU28_RS01710 IPR006143 RND efflux pump, membrane fusion protein AU28_RS01710 IPR032317 AU28_RS01710 AU28_RS01715 IPR001757 Cation-transporting P-type ATPase AU28_RS01715 IPR006121 Heavy metal-associated domain, HMA AU28_RS01715 IPR008250 P-type ATPase, A domain AU28_RS01715 IPR017969 Heavy-metal-associated, conserved site AU28_RS01715 IPR018303 P-type ATPase, phosphorylation site AU28_RS01715 IPR023214 HAD-like domain AU28_RS01715 IPR023299 P-type ATPase, cytoplasmic domain N AU28_RS01715 IPR027256 Cation-transporting P-type ATPase, subfamily IB AU28_RS01720 IPR000551 MerR-type HTH domain AU28_RS01720 IPR009061 DNA binding domain, putative AU28_RS01720 IPR011789 Cu(I)-responsive transcriptional regulator AU28_RS01720 IPR015358 Transcription regulator MerR, DNA binding AU28_RS01725 IPR006121 Heavy metal-associated domain, HMA AU28_RS01735 IPR005829 Sugar transporter, conserved site AU28_RS01735 IPR011701 Major facilitator superfamily AU28_RS01735 IPR020846 Major facilitator superfamily domain AU28_RS01740 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS01740 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class AU28_RS01740 IPR002941 DNA methylase N-4/N-6 AU28_RS01740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS01745 IPR006935 Helicase/UvrB domain AU28_RS01745 IPR014883 VRR-NUC domain AU28_RS01745 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS01755 IPR002585 Cytochrome d ubiquinol oxidase, subunit I AU28_RS01760 IPR003317 Cytochrome d ubiquinol oxidase, subunit II AU28_RS01765 IPR018895 Protein of unknown function DUF2474 AU28_RS01770 IPR009057 Homeodomain-like AU28_RS01770 IPR018060 DNA binding HTH domain, AraC-type AU28_RS01770 IPR018062 HTH domain AraC-type, conserved site AU28_RS01775 IPR000531 TonB-dependent receptor, beta-barrel AU28_RS01775 IPR010105 TonB-dependent siderophore receptor AU28_RS01775 IPR012910 TonB-dependent receptor, plug AU28_RS01780 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AU28_RS01780 IPR004778 Homoserine/Threonine efflux protein AU28_RS01785 IPR010854 Domain of unknown function DUF1471 AU28_RS01785 IPR025543 Dodecin-like AU28_RS01790 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS01790 IPR002197 DNA binding HTH domain, Fis-type AU28_RS01790 IPR003593 AAA+ ATPase domain AU28_RS01790 IPR009057 Homeodomain-like AU28_RS01790 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal AU28_RS01790 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR AU28_RS01790 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS01790 IPR025944 Sigma-54 interaction domain, conserved site AU28_RS01790 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS01795 IPR012695 Methylisocitrate lyase AU28_RS01795 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS01795 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AU28_RS01800 IPR002020 Citrate synthase-like AU28_RS01800 IPR011278 2-methylcitrate synthase/citrate synthase type I AU28_RS01800 IPR016142 Citrate synthase-like, large alpha subdomain AU28_RS01800 IPR016143 Citrate synthase-like, small alpha subdomain AU28_RS01800 IPR019810 Citrate synthase active site AU28_RS01800 IPR024176 Citrate synthase, bacterial-type AU28_RS01805 IPR005656 MmgE/PrpD AU28_RS01805 IPR012705 2-methylcitrate dehydratase PrpD AU28_RS01810 IPR000873 AMP-dependent synthetase/ligase AU28_RS01810 IPR012694 Propionate--CoA ligase AU28_RS01810 IPR020845 AMP-binding, conserved site AU28_RS01810 IPR025110 AMP-binding enzyme C-terminal domain AU28_RS01810 IPR032387 AU28_RS01810 AU28_RS01815 IPR001731 Porphobilinogen synthase AU28_RS01815 IPR013785 Aldolase-type TIM barrel AU28_RS01815 IPR030656 AU28_RS01815 AU28_RS01820 IPR003991 Pertactin virulence factor family AU28_RS01820 IPR005546 Autotransporter beta-domain AU28_RS01820 IPR006315 Outer membrane autotransporter barrel AU28_RS01820 IPR011050 Pectin lyase fold/virulence factor AU28_RS01825 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS01825 IPR014710 RmlC-like jelly roll fold AU28_RS01825 IPR018490 Cyclic nucleotide-binding-like AU28_RS01830 IPR001466 Beta-lactamase-related AU28_RS01830 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS01835 IPR009248 SbmA/BacA-like AU28_RS01835 IPR011527 ABC transporter type 1, transmembrane domain AU28_RS01840 IPR011673 Protein of unknown function DUF1615 AU28_RS01845 IPR020513 Uncharacterised protein family, inner membrane YaiY AU28_RS01850 IPR020490 Uncharacterised protein family YaiZ AU28_RS01855 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AU28_RS01855 IPR005905 D-alanine--D-alanine ligase AU28_RS01855 IPR011095 D-alanine--D-alanine ligase, C-terminal AU28_RS01855 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AU28_RS01855 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS01855 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS01855 IPR016185 Pre-ATP-grasp domain AU28_RS01860 IPR009683 Extensin-like, C-terminal AU28_RS01865 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG AU28_RS01865 IPR011701 Major facilitator superfamily AU28_RS01865 IPR020846 Major facilitator superfamily domain AU28_RS01870 IPR019732 Sigma-S stabilisation anti-adaptor protein AU28_RS01875 IPR011690 Phosphate-starvation-induced PsiF repeat AU28_RS01880 IPR000160 GGDEF domain AU28_RS01880 IPR007894 MASE2 AU28_RS01880 IPR029787 Nucleotide cyclase AU28_RS01885 IPR000304 Pyrroline-5-carboxylate reductase AU28_RS01885 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS01885 IPR016040 NAD(P)-binding domain AU28_RS01885 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AU28_RS01885 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain AU28_RS01890 IPR003791 Protein of unknown function UPF0178 AU28_RS01895 IPR000623 Shikimate kinase/Threonine synthase-like 1 AU28_RS01895 IPR023000 Shikimate kinase, conserved site AU28_RS01895 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS01895 IPR027544 Shikimate kinase 2 AU28_RS01895 IPR031322 AU28_RS01895 AU28_RS01900 IPR032303 AU28_RS01900 AU28_RS01905 IPR010843 Uncharacterised protein family AroM AU28_RS01910 IPR009664 Protein of unknown function DUF1255 AU28_RS01910 IPR011051 RmlC-like cupin domain AU28_RS01910 IPR014710 RmlC-like jelly roll fold AU28_RS01915 IPR007476 Putative exonuclease, RdgC AU28_RS01920 IPR000600 ROK AU28_RS01925 IPR011701 Major facilitator superfamily AU28_RS01925 IPR020846 Major facilitator superfamily domain AU28_RS01930 IPR004592 Nuclease SbcC, gammaproteobacteria type AU28_RS01930 IPR027050 Nuclease SbcCD subunit C AU28_RS01930 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS01935 IPR004593 Nuclease SbcCD subunit D AU28_RS01935 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AU28_RS01935 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AU28_RS01935 IPR029052 Metallo-dependent phosphatase-like AU28_RS01945 IPR001789 Signal transduction response regulator, receiver domain AU28_RS01945 IPR001867 Signal transduction response regulator, C-terminal AU28_RS01945 IPR011006 CheY-like superfamily AU28_RS01945 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB AU28_RS01945 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS01950 IPR000014 PAS domain AU28_RS01950 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS01950 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS01950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS01950 IPR013767 PAS fold AU28_RS01950 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR AU28_RS01950 IPR021766 Protein of unknown function DUF3329 AU28_RS01955 IPR004685 Branched-chain amino acid transport system II carrier protein AU28_RS01960 IPR002293 Amino acid/polyamine transporter I AU28_RS01960 IPR004840 Amino acid permease, conserved site AU28_RS01960 IPR004841 Amino acid permease/ SLC12A domain AU28_RS01965 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain AU28_RS01965 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AU28_RS01965 IPR013780 Glycosyl hydrolase, family 13, all-beta AU28_RS01965 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS01965 IPR014756 Immunoglobulin E-set AU28_RS01965 IPR015902 Glycoside hydrolase, family 13 AU28_RS01965 IPR017069 Maltodextrin glucosidase AU28_RS01965 IPR017853 Glycoside hydrolase, superfamily AU28_RS01970 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AU28_RS01970 IPR012336 Thioredoxin-like fold AU28_RS01970 IPR019479 Peroxiredoxin, C-terminal AU28_RS01970 IPR024706 Peroxiredoxin, AhpC-type AU28_RS01975 IPR007431 Acyl carrier protein phosphodiesterase AU28_RS01975 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria AU28_RS01980 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA AU28_RS01985 IPR002616 tRNA-guanine(15) transglycosylase-like AU28_RS01985 IPR004803 Queuine tRNA-ribosyltransferase AU28_RS01990 IPR003849 Preprotein translocase YajC AU28_RS01995 IPR005791 Protein translocase subunit SecD AU28_RS01995 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AU28_RS01995 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AU28_RS01995 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AU28_RS01995 IPR027398 SecD export protein N-terminal TM domain AU28_RS02000 IPR005665 Protein-export membrane protein SecF, bacterial AU28_RS02000 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AU28_RS02000 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AU28_RS02000 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AU28_RS02005 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AU28_RS02005 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AU28_RS02010 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS02010 IPR013196 Helix-turn-helix, type 11 AU28_RS02010 IPR026881 WYL domain AU28_RS02015 IPR002711 HNH endonuclease AU28_RS02015 IPR003615 HNH nuclease AU28_RS02020 IPR025253 Type I toxin-antitoxin system, toxin Ldr AU28_RS02025 IPR003055 Nucleoside-specific channel-forming protein, Tsx AU28_RS02025 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like AU28_RS02030 IPR021658 Domain of unknown function DUF3251 AU28_RS02035 IPR003796 Ribonucleotide reductase regulator NrdR-like AU28_RS02035 IPR005144 ATP-cone AU28_RS02040 IPR002125 CMP/dCMP deaminase, zinc-binding AU28_RS02040 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AU28_RS02040 IPR004794 Riboflavin biosynthesis protein RibD AU28_RS02040 IPR011549 Riboflavin-specific deaminase, C-terminal AU28_RS02040 IPR016192 APOBEC/CMP deaminase, zinc-binding AU28_RS02040 IPR016193 Cytidine deaminase-like AU28_RS02040 IPR024072 Dihydrofolate reductase-like domain AU28_RS02045 IPR002180 6,7-dimethyl-8-ribityllumazine synthase AU28_RS02050 IPR006027 NusB/RsmB/TIM44 AU28_RS02050 IPR011605 NusB antitermination factor AU28_RS02055 IPR006283 Thiamine-monophosphate kinase AU28_RS02055 IPR010918 AIR synthase-related protein, C-terminal domain AU28_RS02055 IPR016188 PurM, N-terminal-like AU28_RS02060 IPR007686 YutG/PgpA domain AU28_RS02060 IPR026037 Phosphatidylglycerophosphatase A AU28_RS02060 IPR027416 YutG-like domain AU28_RS02065 IPR001395 Aldo/keto reductase AU28_RS02065 IPR020471 Aldo/keto reductase subgroup AU28_RS02065 IPR023210 NADP-dependent oxidoreductase domain AU28_RS02070 IPR005474 Transketolase, N-terminal AU28_RS02070 IPR005475 Transketolase-like, pyrimidine-binding domain AU28_RS02070 IPR005477 Deoxyxylulose-5-phosphate synthase AU28_RS02070 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AU28_RS02070 IPR020826 Transketolase binding site AU28_RS02070 IPR029061 Thiamin diphosphate-binding fold AU28_RS02070 IPR033247 AU28_RS02070 AU28_RS02070 IPR033248 AU28_RS02070 AU28_RS02075 IPR000092 Polyprenyl synthetase AU28_RS02075 IPR008949 Terpenoid synthase AU28_RS02075 IPR017446 Polyprenyl synthetase-related AU28_RS02080 IPR003761 Exonuclease VII, small subunit AU28_RS02085 IPR001763 Rhodanese-like domain AU28_RS02085 IPR003720 tRNA sulfurtransferase ThiI AU28_RS02085 IPR004114 THUMP AU28_RS02085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS02085 IPR020536 Thil, AANH domain AU28_RS02085 IPR026340 Thiazole biosynthesis domain AU28_RS02090 IPR000515 MetI-like domain AU28_RS02090 IPR017661 2-aminoethylphosphonate ABC transport system, membrane component PhnV AU28_RS02095 IPR000515 MetI-like domain AU28_RS02095 IPR017636 2-aminoethylphosphonate ABC transporter system, permease protein phnU AU28_RS02100 IPR003439 ABC transporter-like AU28_RS02100 IPR003593 AAA+ ATPase domain AU28_RS02100 IPR008995 Molybdate/tungstate binding, C-terminal AU28_RS02100 IPR013611 Transport-associated OB, type 2 AU28_RS02100 IPR017662 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT AU28_RS02100 IPR017871 ABC transporter, conserved site AU28_RS02100 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02105 IPR017637 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein AU28_RS02110 IPR000524 Transcription regulator HTH, GntR AU28_RS02110 IPR011663 UbiC transcription regulator-associated AU28_RS02110 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS02110 IPR017722 Transcription regulator PhnR AU28_RS02110 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AU28_RS02115 IPR000192 Aminotransferase class V domain AU28_RS02115 IPR012703 2-aminoethylphosphonate--pyruvate transaminase AU28_RS02115 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS02115 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS02115 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS02115 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase AU28_RS02120 IPR006323 Phosphonoacetaldehyde hydrolase AU28_RS02120 IPR006439 HAD hydrolase, subfamily IA AU28_RS02120 IPR023198 Phosphoglycolate phosphatase, domain 2 AU28_RS02120 IPR023214 HAD-like domain AU28_RS02125 IPR002818 ThiJ/PfpI AU28_RS02125 IPR006287 DJ-1 AU28_RS02125 IPR029062 Class I glutamine amidotransferase-like AU28_RS02130 IPR003710 Ketopantoate reductase ApbA/PanE AU28_RS02130 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS02130 IPR013328 Dehydrogenase, multihelical AU28_RS02130 IPR013332 Ketopantoate reductase, N-terminal domain AU28_RS02130 IPR013752 Ketopantoate reductase, C-terminal domain AU28_RS02130 IPR016040 NAD(P)-binding domain AU28_RS02135 IPR007551 Protein of unknown function DUF520 AU28_RS02140 IPR011701 Major facilitator superfamily AU28_RS02140 IPR020846 Major facilitator superfamily domain AU28_RS02145 IPR006597 Sel1-like AU28_RS02145 IPR011990 Tetratricopeptide-like helical domain AU28_RS02150 IPR006597 Sel1-like AU28_RS02150 IPR011990 Tetratricopeptide-like helical domain AU28_RS02155 IPR000537 UbiA prenyltransferase family AU28_RS02155 IPR006369 Protohaem IX farnesyltransferase AU28_RS02155 IPR030470 AU28_RS02155 AU28_RS02160 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes AU28_RS02160 IPR014210 Cytochrome o ubiquinol oxidase subunit IV AU28_RS02165 IPR000298 Cytochrome c oxidase subunit III domain AU28_RS02165 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle AU28_RS02165 IPR014206 Cytochrome o ubiquinol oxidase, subunit III AU28_RS02165 IPR024791 Cytochrome c oxidase subunit III AU28_RS02170 IPR000883 Cytochrome c oxidase subunit I AU28_RS02170 IPR014207 Cytochrome o ubiquinol oxidase, subunit I AU28_RS02170 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AU28_RS02170 IPR023616 Cytochrome c oxidase, subunit I domain AU28_RS02175 IPR002429 Cytochrome c oxidase subunit II C-terminal AU28_RS02175 IPR006333 Cytochrome o ubiquinol oxidase subunit II AU28_RS02175 IPR008972 Cupredoxin AU28_RS02175 IPR010514 COX aromatic rich motif AU28_RS02175 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain AU28_RS02180 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 AU28_RS02180 IPR011701 Major facilitator superfamily AU28_RS02180 IPR020846 Major facilitator superfamily domain AU28_RS02185 IPR005619 Uncharacterised protein family, YajG AU28_RS02185 IPR012640 Membrane lipoprotein, lipid attachment site AU28_RS02190 IPR002634 BolA protein AU28_RS02195 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AU28_RS02195 IPR005215 Trigger factor AU28_RS02195 IPR008880 Trigger factor, C-terminal domain AU28_RS02195 IPR008881 Trigger factor, ribosome-binding, bacterial AU28_RS02195 IPR027304 Trigger factor/SurA domain AU28_RS02200 IPR001907 ATP-dependent Clp protease proteolytic subunit AU28_RS02200 IPR018215 ClpP, active site AU28_RS02200 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AU28_RS02200 IPR029045 ClpP/crotonase-like domain AU28_RS02200 IPR033135 AU28_RS02200 AU28_RS02205 IPR003593 AAA+ ATPase domain AU28_RS02205 IPR003959 ATPase, AAA-type, core AU28_RS02205 IPR004487 Clp protease, ATP-binding subunit ClpX AU28_RS02205 IPR010603 Zinc finger, ClpX C4-type AU28_RS02205 IPR019489 Clp ATPase, C-terminal AU28_RS02205 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02210 IPR003111 Peptidase S16, lon N-terminal AU28_RS02210 IPR003593 AAA+ ATPase domain AU28_RS02210 IPR003959 ATPase, AAA-type, core AU28_RS02210 IPR004815 Lon protease, bacterial/eukaryotic-type AU28_RS02210 IPR008268 Peptidase S16, active site AU28_RS02210 IPR008269 Peptidase S16, Lon C-terminal AU28_RS02210 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS02210 IPR015947 PUA-like domain AU28_RS02210 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS02210 IPR027065 Lon protease AU28_RS02210 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02210 IPR027543 Lon protease, bacterial AU28_RS02215 IPR000119 Histone-like bacterial DNA-binding protein AU28_RS02215 IPR010992 Integration host factor (IHF)-like DNA-binding domain AU28_RS02215 IPR020816 Histone-like DNA-binding protein, conserved site AU28_RS02220 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AU28_RS02220 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AU28_RS02220 IPR027304 Trigger factor/SurA domain AU28_RS02225 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AU28_RS02225 IPR010994 RuvA domain 2-like AU28_RS02230 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family AU28_RS02230 IPR029069 HotDog domain AU28_RS02235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS02235 IPR018317 Queuosine biosynthesis protein QueC AU28_RS02240 IPR000914 Bacterial extracellular solute-binding protein, family 5 AU28_RS02240 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AU28_RS02245 IPR000150 Cof protein AU28_RS02245 IPR006379 HAD-superfamily hydrolase, subfamily IIB AU28_RS02245 IPR023214 HAD-like domain AU28_RS02245 IPR023938 HMP-PP phosphatase AU28_RS02250 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS02255 IPR000485 AsnC-type HTH domain AU28_RS02255 IPR011008 Dimeric alpha-beta barrel AU28_RS02255 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS02255 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AU28_RS02255 IPR019887 Transcription regulator AsnC-type, C-terminal AU28_RS02255 IPR019888 Transcription regulator AsnC-type AU28_RS02260 IPR003439 ABC transporter-like AU28_RS02260 IPR003593 AAA+ ATPase domain AU28_RS02260 IPR011527 ABC transporter type 1, transmembrane domain AU28_RS02260 IPR017871 ABC transporter, conserved site AU28_RS02260 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02265 IPR003439 ABC transporter-like AU28_RS02265 IPR003593 AAA+ ATPase domain AU28_RS02265 IPR011527 ABC transporter type 1, transmembrane domain AU28_RS02265 IPR017871 ABC transporter, conserved site AU28_RS02265 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02270 IPR002187 Nitrogen regulatory protein PII AU28_RS02270 IPR002332 Nitrogen regulatory protein P-II, urydylation site AU28_RS02270 IPR011322 Nitrogen regulatory PII-like, alpha/beta AU28_RS02270 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AU28_RS02270 IPR017918 Nitrogen regulatory protein PII, conserved site AU28_RS02275 IPR001905 Ammonium transporter AU28_RS02275 IPR002229 Blood group Rhesus C/E/D polypeptide AU28_RS02275 IPR018047 Ammonium transporter, conserved site AU28_RS02275 IPR024041 Ammonium transporter AmtB-like domain AU28_RS02275 IPR029020 Ammonium/urea transporter AU28_RS02280 IPR003703 Acyl-CoA thioesterase AU28_RS02280 IPR029069 HotDog domain AU28_RS02290 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS02290 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AU28_RS02295 IPR001633 EAL domain AU28_RS02295 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AU28_RS02300 IPR002150 Ribosomal protein L31 AU28_RS02300 IPR027493 Ribosomal protein L31 type B AU28_RS02305 IPR000473 Ribosomal protein L36 AU28_RS02310 IPR019713 Inner membrane protein YlaC AU28_RS02315 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS02315 IPR011004 Trimeric LpxA-like AU28_RS02315 IPR018357 Hexapeptide transferase, conserved site AU28_RS02315 IPR024688 Maltose/galactoside acetyltransferase AU28_RS02320 IPR007985 Haemolysin expression modulating, HHA AU28_RS02325 IPR019693 Biofilm formation regulator YbaJ AU28_RS02330 IPR001036 Acriflavin resistance protein AU28_RS02330 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AU28_RS02330 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AU28_RS02335 IPR006143 RND efflux pump, membrane fusion protein AU28_RS02335 IPR032317 AU28_RS02335 AU28_RS02340 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS02340 IPR009057 Homeodomain-like AU28_RS02340 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS02340 IPR013572 Transcription regulator MAATS, C-terminal AU28_RS02340 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS02340 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AU28_RS02345 IPR006685 Mechanosensitive ion channel MscS AU28_RS02345 IPR006686 Mechanosensitive ion channel MscS, conserved site AU28_RS02345 IPR010920 Like-Sm (LSM) domain AU28_RS02345 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AU28_RS02345 IPR011066 Mechanosensitive ion channel MscS, C-terminal AU28_RS02345 IPR024393 Mechanosensitive ion channel MscS, porin domain AU28_RS02345 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AU28_RS02350 IPR006842 Transposase (putative), YhgA-like AU28_RS02350 IPR010106 Conserved hypothetical protein CHP01784 AU28_RS02355 IPR019630 Protein of unknown function DUF2496, YbaM-related AU28_RS02360 IPR010890 Primosomal replication PriB/PriC AU28_RS02365 IPR007401 Protein of unknown function DUF454 AU28_RS02370 IPR000836 Phosphoribosyltransferase domain AU28_RS02370 IPR005764 Adenine phosphoribosyl transferase AU28_RS02370 IPR029057 Phosphoribosyltransferase-like AU28_RS02375 IPR001270 ClpA/B family AU28_RS02375 IPR003593 AAA+ ATPase domain AU28_RS02375 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AU28_RS02375 IPR012763 DNA polymerase III, subunit gamma/ tau AU28_RS02375 IPR021029 DNA polymerase III, tau subunit, domain V AU28_RS02375 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV AU28_RS02375 IPR022754 DNA polymerase III, gamma subunit, domain III AU28_RS02375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02380 IPR004401 Nucleoid-associated protein YbaB AU28_RS02385 IPR000093 DNA recombination protein RecR AU28_RS02385 IPR006171 Toprim domain AU28_RS02385 IPR015967 Recombination protein RecR, conserved site AU28_RS02385 IPR023627 Recombination protein RecR AU28_RS02385 IPR023628 Recombination protein RecR, C4-type zinc finger AU28_RS02390 IPR001404 Heat shock protein Hsp90 family AU28_RS02390 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS02390 IPR019805 Heat shock protein Hsp90, conserved site AU28_RS02390 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS02390 IPR020575 Heat shock protein Hsp90, N-terminal AU28_RS02395 IPR000850 Adenylate kinase/UMP-CMP kinase AU28_RS02395 IPR006259 Adenylate kinase subfamily AU28_RS02395 IPR007862 Adenylate kinase, active site lid domain AU28_RS02395 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02400 IPR001015 Ferrochelatase AU28_RS02400 IPR019772 Ferrochelatase, active site AU28_RS02405 IPR013094 Alpha/beta hydrolase fold-3 AU28_RS02405 IPR023508 Acetyl esterase AU28_RS02405 IPR029058 Alpha/Beta hydrolase fold AU28_RS02405 IPR033140 AU28_RS02405 AU28_RS02410 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS02410 IPR011611 Carbohydrate kinase PfkB AU28_RS02410 IPR029056 Ribokinase-like AU28_RS02415 IPR003148 Regulator of K+ conductance, N-terminal AU28_RS02415 IPR004771 K+/H+ exchanger AU28_RS02415 IPR006153 Cation/H+ exchanger AU28_RS02415 IPR016040 NAD(P)-binding domain AU28_RS02420 IPR011701 Major facilitator superfamily AU28_RS02420 IPR020846 Major facilitator superfamily domain AU28_RS02430 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AU28_RS02430 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AU28_RS02435 IPR002816 Pheromone shutdown, TraB AU28_RS02440 IPR009739 Protein of unknown function DUF1311 AU28_RS02445 IPR001757 Cation-transporting P-type ATPase AU28_RS02445 IPR006121 Heavy metal-associated domain, HMA AU28_RS02445 IPR008250 P-type ATPase, A domain AU28_RS02445 IPR017969 Heavy-metal-associated, conserved site AU28_RS02445 IPR018303 P-type ATPase, phosphorylation site AU28_RS02445 IPR023214 HAD-like domain AU28_RS02445 IPR023299 P-type ATPase, cytoplasmic domain N AU28_RS02445 IPR027256 Cation-transporting P-type ATPase, subfamily IB AU28_RS02450 IPR000551 MerR-type HTH domain AU28_RS02450 IPR009061 DNA binding domain, putative AU28_RS02450 IPR011789 Cu(I)-responsive transcriptional regulator AU28_RS02455 IPR002810 NfeD-like, C-terminal domain AU28_RS02455 IPR012340 Nucleic acid-binding, OB-fold AU28_RS02460 IPR001107 Band 7 protein AU28_RS02460 IPR001972 Stomatin family AU28_RS02460 IPR018080 Band 7/stomatin-like, conserved site AU28_RS02465 IPR003439 ABC transporter-like AU28_RS02465 IPR003593 AAA+ ATPase domain AU28_RS02465 IPR017871 ABC transporter, conserved site AU28_RS02465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02470 IPR005226 UPF0014 family AU28_RS02475 IPR005746 Thioredoxin AU28_RS02475 IPR011990 Tetratricopeptide-like helical domain AU28_RS02475 IPR012336 Thioredoxin-like fold AU28_RS02475 IPR013766 Thioredoxin domain AU28_RS02480 IPR002347 Glucose/ribitol dehydrogenase AU28_RS02480 IPR016040 NAD(P)-binding domain AU28_RS02480 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS02485 IPR008265 Lipase, GDSL, active site AU28_RS02485 IPR013830 AU28_RS02485 AU28_RS02490 IPR003439 ABC transporter-like AU28_RS02490 IPR003593 AAA+ ATPase domain AU28_RS02490 IPR017871 ABC transporter, conserved site AU28_RS02490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02495 IPR003838 Permease FtsX-like AU28_RS02500 IPR023614 Porin domain AU28_RS02505 IPR004872 Lipoprotein NlpA family AU28_RS02510 IPR003439 ABC transporter-like AU28_RS02510 IPR003593 AAA+ ATPase domain AU28_RS02510 IPR017871 ABC transporter, conserved site AU28_RS02510 IPR018449 NIL domain AU28_RS02510 IPR026253 Methionine import ATP-binding protein MetN AU28_RS02510 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02515 IPR000515 MetI-like domain AU28_RS02520 IPR001763 Rhodanese-like domain AU28_RS02520 IPR017582 tRNA 2-selenouridine synthase AU28_RS02525 IPR000847 Transcription regulator HTH, LysR AU28_RS02525 IPR005119 LysR, substrate-binding AU28_RS02525 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS02530 IPR007247 Ureidoglycolate hydrolase AU28_RS02530 IPR011051 RmlC-like cupin domain AU28_RS02530 IPR023525 Ureidoglycolate hydrolase, bacterial AU28_RS02530 IPR024060 Ureidoglycolate hydrolase domain AU28_RS02535 IPR005471 Transcription regulator IclR, N-terminal AU28_RS02535 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS02535 IPR014757 Transcription regulator IclR, C-terminal AU28_RS02535 IPR029016 GAF domain-like AU28_RS02540 IPR006397 Glyoxylate carboligase AU28_RS02540 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AU28_RS02540 IPR012000 Thiamine pyrophosphate enzyme, central domain AU28_RS02540 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AU28_RS02540 IPR029035 DHS-like NAD/FAD-binding domain AU28_RS02540 IPR029061 Thiamin diphosphate-binding fold AU28_RS02545 IPR013022 Xylose isomerase-like, TIM barrel domain AU28_RS02545 IPR017643 Hydroxypyruvate isomerase AU28_RS02545 IPR026040 Hydroxypyruvate isomerase-like AU28_RS02550 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AU28_RS02550 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AU28_RS02550 IPR006398 2-hydroxy-3-oxopropionate reductase AU28_RS02550 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS02550 IPR013328 Dehydrogenase, multihelical AU28_RS02550 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type AU28_RS02550 IPR016040 NAD(P)-binding domain AU28_RS02550 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AU28_RS02555 IPR011701 Major facilitator superfamily AU28_RS02555 IPR020846 Major facilitator superfamily domain AU28_RS02560 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin AU28_RS02560 IPR012681 Nucleobase cation symporter-1, NCS1 AU28_RS02565 IPR006680 Amidohydrolase 1 AU28_RS02565 IPR011059 Metal-dependent hydrolase, composite domain AU28_RS02565 IPR017593 Allantoinase AU28_RS02565 IPR032466 AU28_RS02565 AU28_RS02570 IPR006043 Xanthine/uracil/vitamin C permease AU28_RS02575 IPR004381 Glycerate kinase AU28_RS02575 IPR018193 Glycerate kinase, flavodoxin-like domain AU28_RS02580 IPR008579 Domain of unknown function DUF861, cupin-3 AU28_RS02580 IPR011051 RmlC-like cupin domain AU28_RS02580 IPR013096 Cupin 2, conserved barrel AU28_RS02580 IPR014710 RmlC-like jelly roll fold AU28_RS02580 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein AU28_RS02585 IPR002933 Peptidase M20 AU28_RS02585 IPR010158 Amidase, hydantoinase/carbamoylase AU28_RS02585 IPR011650 Peptidase M20, dimerisation domain AU28_RS02585 IPR017591 Allantoate amidohydrolase AU28_RS02590 IPR003767 Malate/L-lactate dehydrogenase AU28_RS02590 IPR017590 Ureidoglycolate dehydrogenase AU28_RS02595 IPR003781 CoA-binding AU28_RS02595 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AU28_RS02595 IPR016102 Succinyl-CoA synthetase-like AU28_RS02600 IPR009499 Protein of unknown function DUF1116 AU28_RS02600 IPR024033 Uncharacterised domain, YlbE AU28_RS02605 IPR021530 Protein of unknown function DUF2877 AU28_RS02610 IPR001048 Aspartate/glutamate/uridylate kinase AU28_RS02610 IPR003964 Carbamate kinase AU28_RS02615 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AU28_RS02615 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit AU28_RS02615 IPR011054 Rudiment single hybrid motif AU28_RS02615 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS02615 IPR016185 Pre-ATP-grasp domain AU28_RS02620 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain AU28_RS02620 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE AU28_RS02625 IPR010138 UDP-2,3-diacylglucosamine hydrolase AU28_RS02625 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type AU28_RS02625 IPR029052 Metallo-dependent phosphatase-like AU28_RS02630 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AU28_RS02630 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AU28_RS02630 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AU28_RS02630 IPR029000 Cyclophilin-like domain AU28_RS02635 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AU28_RS02635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS02635 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR AU28_RS02635 IPR015803 Cysteine-tRNA ligase AU28_RS02635 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase AU28_RS02635 IPR032678 AU28_RS02635 AU28_RS02640 IPR014547 Uncharacterised conserved protein UCP028477 AU28_RS02650 IPR007404 Protein of unknown function DUF457 AU28_RS02655 IPR002942 RNA-binding S4 domain AU28_RS02660 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AU28_RS02660 IPR016040 NAD(P)-binding domain AU28_RS02660 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AU28_RS02660 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AU28_RS02660 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site AU28_RS02665 IPR000259 Fimbrial-type adhesion domain AU28_RS02665 IPR008966 Adhesion domain AU28_RS02670 IPR000259 Fimbrial-type adhesion domain AU28_RS02670 IPR008966 Adhesion domain AU28_RS02675 IPR001829 Pili assembly chaperone, bacterial AU28_RS02675 IPR008962 PapD-like AU28_RS02675 IPR016147 PapD, N-terminal, bacterial AU28_RS02675 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS02675 IPR018046 Pili assembly chaperone, conserved site AU28_RS02680 IPR000015 Outer membrane usher protein AU28_RS02680 IPR018030 Fimbrial membrane usher, conserved site AU28_RS02680 IPR025885 PapC, N-terminal domain AU28_RS02680 IPR025949 PapC-like, C-terminal domain AU28_RS02685 IPR000259 Fimbrial-type adhesion domain AU28_RS02685 IPR008966 Adhesion domain AU28_RS02690 IPR000259 Fimbrial-type adhesion domain AU28_RS02690 IPR008966 Adhesion domain AU28_RS02695 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS02695 IPR001789 Signal transduction response regulator, receiver domain AU28_RS02695 IPR011006 CheY-like superfamily AU28_RS02695 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS02695 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS02710 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS02710 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS02710 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS02720 IPR001584 Integrase, catalytic core AU28_RS02720 IPR012337 Ribonuclease H-like domain AU28_RS02730 IPR001173 Glycosyltransferase 2-like AU28_RS02730 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS02735 IPR007267 GtrA-like protein AU28_RS02735 IPR016480 Glucose translocase, bactoprenol-linked AU28_RS02745 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS02745 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS02755 IPR003313 AraC-type arabinose-binding/dimerisation domain AU28_RS02755 IPR009057 Homeodomain-like AU28_RS02755 IPR011051 RmlC-like cupin domain AU28_RS02755 IPR018060 DNA binding HTH domain, AraC-type AU28_RS02755 IPR018062 HTH domain AraC-type, conserved site AU28_RS02755 IPR020449 Transcription regulator HTH, AraC- type AU28_RS02755 IPR032783 AU28_RS02755 AU28_RS02760 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AU28_RS02760 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AU28_RS02760 IPR016156 FAD/NAD-linked reductase, dimerisation domain AU28_RS02760 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS02765 IPR010854 Domain of unknown function DUF1471 AU28_RS02765 IPR025543 Dodecin-like AU28_RS02770 IPR007339 Protein of unknown function DUF417 AU28_RS02775 IPR001623 DnaJ domain AU28_RS02780 IPR002293 Amino acid/polyamine transporter I AU28_RS02780 IPR004840 Amino acid permease, conserved site AU28_RS02780 IPR004841 Amino acid permease/ SLC12A domain AU28_RS02785 IPR006685 Mechanosensitive ion channel MscS AU28_RS02785 IPR010920 Like-Sm (LSM) domain AU28_RS02785 IPR011066 Mechanosensitive ion channel MscS, C-terminal AU28_RS02785 IPR030192 AU28_RS02785 AU28_RS02790 IPR005546 Autotransporter beta-domain AU28_RS02790 IPR013830 AU28_RS02790 AU28_RS02790 IPR017186 Lipase, autotransporter EstA AU28_RS02795 IPR000415 Nitroreductase-like AU28_RS02795 IPR029479 Nitroreductase AU28_RS02800 IPR007351 Uncharacterised protein YjbR AU28_RS02805 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS02805 IPR009057 Homeodomain-like AU28_RS02805 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS02805 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AU28_RS02810 IPR009057 Homeodomain-like AU28_RS02810 IPR018060 DNA binding HTH domain, AraC-type AU28_RS02810 IPR018062 HTH domain AraC-type, conserved site AU28_RS02810 IPR020449 Transcription regulator HTH, AraC- type AU28_RS02815 IPR010590 Protein of unknown function DUF1158 AU28_RS02820 IPR006336 Glutamate--cysteine ligase, GCS2 AU28_RS02820 IPR011793 Carboxylate-amine ligase, predicted AU28_RS02825 IPR003542 Enterobactin synthetase-like, component D AU28_RS02825 IPR008278 4'-phosphopantetheinyl transferase superfamily AU28_RS02830 IPR000531 TonB-dependent receptor, beta-barrel AU28_RS02830 IPR010105 TonB-dependent siderophore receptor AU28_RS02830 IPR010916 TonB box, conserved site AU28_RS02830 IPR010917 TonB-dependent receptor, conserved site AU28_RS02830 IPR012910 TonB-dependent receptor, plug AU28_RS02835 IPR000801 Putative esterase AU28_RS02835 IPR013783 Immunoglobulin-like fold AU28_RS02835 IPR014756 Immunoglobulin E-set AU28_RS02835 IPR021764 Enterochelin esterase, N-terminal AU28_RS02835 IPR029058 Alpha/Beta hydrolase fold AU28_RS02840 IPR005153 MbtH-like protein AU28_RS02845 IPR000873 AMP-dependent synthetase/ligase AU28_RS02845 IPR001031 Thioesterase AU28_RS02845 IPR001242 Condensation domain AU28_RS02845 IPR006162 Phosphopantetheine attachment site AU28_RS02845 IPR009081 Acyl carrier protein-like AU28_RS02845 IPR010071 Amino acid adenylation domain AU28_RS02845 IPR020802 Polyketide synthase, thioesterase domain AU28_RS02845 IPR020845 AMP-binding, conserved site AU28_RS02845 IPR029058 Alpha/Beta hydrolase fold AU28_RS02850 IPR003856 Lipopolysaccharide biosynthesis AU28_RS02855 IPR003439 ABC transporter-like AU28_RS02855 IPR003593 AAA+ ATPase domain AU28_RS02855 IPR017871 ABC transporter, conserved site AU28_RS02855 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS02860 IPR000522 ABC transporter, permease protein AU28_RS02860 IPR029022 ABC transporter, BtuC-like AU28_RS02865 IPR000522 ABC transporter, permease protein AU28_RS02865 IPR029022 ABC transporter, BtuC-like AU28_RS02870 IPR010290 Transmembrane secretion effector AU28_RS02870 IPR020846 Major facilitator superfamily domain AU28_RS02870 IPR023722 Enterobactin exporter, EntS AU28_RS02875 IPR002491 ABC transporter periplasmic binding domain AU28_RS02880 IPR004561 Isochorismate synthase AU28_RS02880 IPR005801 ADC synthase AU28_RS02880 IPR015890 Chorismate binding, C-terminal AU28_RS02885 IPR000873 AMP-dependent synthetase/ligase AU28_RS02885 IPR011963 2,3-dihydroxybenzoate-AMP ligase AU28_RS02885 IPR020845 AMP-binding, conserved site AU28_RS02885 IPR025110 AMP-binding enzyme C-terminal domain AU28_RS02890 IPR000868 Isochorismatase-like AU28_RS02890 IPR009081 Acyl carrier protein-like AU28_RS02890 IPR016291 Isochorismatase AU28_RS02895 IPR002347 Glucose/ribitol dehydrogenase AU28_RS02895 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase AU28_RS02895 IPR016040 NAD(P)-binding domain AU28_RS02895 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS02900 IPR003736 Phenylacetic acid degradation-related domain AU28_RS02900 IPR006683 Thioesterase superfamily AU28_RS02900 IPR026576 Proofreading thioesterase EntH AU28_RS02900 IPR029069 HotDog domain AU28_RS02905 IPR003706 Carbon starvation protein CstA AU28_RS02905 IPR025299 CstA C-terminal domain AU28_RS02910 IPR007423 Protein of unknown function DUF466 AU28_RS02915 IPR001670 Alcohol dehydrogenase, iron-type AU28_RS02915 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AU28_RS02920 IPR004839 Aminotransferase, class I/classII AU28_RS02920 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS02920 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS02920 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS02925 IPR003115 ParB/Sulfiredoxin AU28_RS02930 IPR002500 Phosphoadenosine phosphosulphate reductase AU28_RS02930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS02930 IPR021845 Protein of unknown function DUF3440 AU28_RS02935 IPR000847 Transcription regulator HTH, LysR AU28_RS02935 IPR005119 LysR, substrate-binding AU28_RS02935 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS02940 IPR012336 Thioredoxin-like fold AU28_RS02940 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AU28_RS02945 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AU28_RS02945 IPR012336 Thioredoxin-like fold AU28_RS02945 IPR017559 Alkyl hydroperoxide reductase subunit C AU28_RS02945 IPR019479 Peroxiredoxin, C-terminal AU28_RS02945 IPR024706 Peroxiredoxin, AhpC-type AU28_RS02950 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II AU28_RS02950 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AU28_RS02950 IPR012081 Alkyl hydroperoxide reductase subunit F AU28_RS02950 IPR012336 Thioredoxin-like fold AU28_RS02950 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS02955 IPR020945 DMSO/Nitrate reductase chaperone AU28_RS02960 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS02960 IPR006656 Molybdopterin oxidoreductase AU28_RS02960 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS02960 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS02960 IPR009010 Aspartate decarboxylase-like domain AU28_RS02960 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AU28_RS02965 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS02965 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS02970 IPR007059 DMSO reductase anchor subunit (DmsC) AU28_RS02975 IPR006015 Universal stress protein A AU28_RS02975 IPR006016 UspA AU28_RS02975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS02980 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS02980 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AU28_RS02980 IPR011032 GroES (chaperonin 10)-like AU28_RS02980 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS02980 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS02980 IPR016040 NAD(P)-binding domain AU28_RS02980 IPR027399 Alcohol dehydrogenase GroES-associated N-terminal domain AU28_RS02985 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AU28_RS02985 IPR028625 Regulator of nucleoside diphosphate kinase AU28_RS02985 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AU28_RS02990 IPR001568 Ribonuclease T2-like AU28_RS02990 IPR018188 Ribonuclease T2, active site AU28_RS02990 IPR033130 AU28_RS02990 AU28_RS02995 IPR001898 Sodium/sulphate symporter AU28_RS02995 IPR030676 AU28_RS02995 AU28_RS03000 IPR002736 Triphosphoribosyl-dephospho-CoA protein AU28_RS03000 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG AU28_RS03005 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AU28_RS03010 IPR006472 Citrate lyase, alpha subunit AU28_RS03015 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AU28_RS03015 IPR006475 Citrate lyase, beta subunit, bacteria AU28_RS03015 IPR011206 Citrate lyase beta subunit-like AU28_RS03015 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS03020 IPR006495 Citrate lyase acyl carrier protein CitD AU28_RS03020 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AU28_RS03025 IPR004821 Cytidyltransferase-like domain AU28_RS03025 IPR005216 Citrate lyase ligase AU28_RS03025 IPR013166 Citrate lyase ligase, C-terminal AU28_RS03025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS03025 IPR016181 Acyl-CoA N-acyltransferase AU28_RS03030 IPR000014 PAS domain AU28_RS03030 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS03030 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS03030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS03030 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB AU28_RS03030 IPR029151 Periplasmic sensor domain-like AU28_RS03030 IPR033463 AU28_RS03030 AU28_RS03035 IPR001789 Signal transduction response regulator, receiver domain AU28_RS03035 IPR011006 CheY-like superfamily AU28_RS03035 IPR024187 Signal transduction response regulator, citrate/malate metabolism AU28_RS03035 IPR028141 Transcriptional regulator AU28_RS03040 IPR004669 C4-dicarboxylate anaerobic carrier AU28_RS03040 IPR018385 C4-dicarboxylate anaerobic carrier-like AU28_RS03045 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP AU28_RS03045 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS03050 IPR002059 Cold-shock protein, DNA-binding AU28_RS03050 IPR011129 Cold shock protein AU28_RS03050 IPR012156 Cold shock, CspA AU28_RS03050 IPR012340 Nucleic acid-binding, OB-fold AU28_RS03050 IPR019844 Cold-shock conserved site AU28_RS03055 IPR003691 Putative fluoride ion transporter CrcB AU28_RS03060 IPR001110 Uncharacterised protein family UPF0012, conserved site AU28_RS03060 IPR003010 Carbon-nitrogen hydrolase AU28_RS03065 IPR003369 Sec-independent protein translocase protein TatA/B/E AU28_RS03065 IPR006312 Sec-independent protein translocase protein TatA/E AU28_RS03065 IPR024905 Sec-independent protein translocase protein TatE AU28_RS03070 IPR003698 Lipoyl synthase AU28_RS03070 IPR006638 Elongator protein 3/MiaB/NifB AU28_RS03070 IPR007197 Radical SAM AU28_RS03070 IPR013785 Aldolase-type TIM barrel AU28_RS03070 IPR031691 AU28_RS03070 AU28_RS03075 IPR000847 Transcription regulator HTH, LysR AU28_RS03075 IPR005119 LysR, substrate-binding AU28_RS03075 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS03080 IPR000544 Octanoyltransferase AU28_RS03080 IPR004143 Biotin/lipoate A/B protein ligase AU28_RS03080 IPR020605 Octanoyltransferase, conserved site AU28_RS03085 IPR007454 Uncharacterised protein family UPF0250 AU28_RS03085 IPR027471 YbeD-like domain AU28_RS03090 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AU28_RS03090 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS03090 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AU28_RS03090 IPR015956 Penicillin-binding protein-associated AU28_RS03090 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AU28_RS03095 IPR007730 Sporulation-related domain AU28_RS03095 IPR009009 RlpA-like double-psi beta-barrel domain AU28_RS03095 IPR012997 Rare lipoprotein A, bacterial AU28_RS03100 IPR001182 Cell cycle protein FtsW/RodA AU28_RS03100 IPR011923 Rod shape-determining protein RodA AU28_RS03100 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AU28_RS03105 IPR001460 Penicillin-binding protein, transpeptidase AU28_RS03105 IPR005311 Penicillin-binding protein, dimerisation domain AU28_RS03105 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS03105 IPR017790 Penicillin-binding protein 2 AU28_RS03110 IPR003742 SPOUT methyltransferase, predicted AU28_RS03110 IPR016051 Ribosomal RNA large subunit methyltransferase H AU28_RS03110 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AU28_RS03110 IPR029028 Alpha/beta knot methyltransferases AU28_RS03115 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AU28_RS03125 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site AU28_RS03125 IPR013078 Histidine phosphatase superfamily, clade-1 AU28_RS03125 IPR017578 Alpha-ribazole phosphatase, CobC AU28_RS03125 IPR029033 Histidine phosphatase superfamily AU28_RS03130 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AU28_RS03130 IPR004839 Aminotransferase, class I/classII AU28_RS03130 IPR005860 L-threonine-O-3-phosphate decarboxylase AU28_RS03130 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS03130 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS03130 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS03135 IPR004821 Cytidyltransferase-like domain AU28_RS03135 IPR005248 Probable nicotinate-nucleotide adenylyltransferase AU28_RS03135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS03140 IPR005790 DNA polymerase III, delta subunit AU28_RS03140 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AU28_RS03140 IPR010372 DNA polymerase III, delta AU28_RS03140 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03140 IPR032780 AU28_RS03140 AU28_RS03145 IPR007485 Lipopolysaccharide assembly, LptE AU28_RS03150 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AU28_RS03150 IPR002300 Aminoacyl-tRNA synthetase, class Ia AU28_RS03150 IPR002302 Leucine-tRNA ligase AU28_RS03150 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AU28_RS03150 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AU28_RS03150 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AU28_RS03150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS03150 IPR025709 Leucyl-tRNA synthetase, editing domain AU28_RS03155 IPR013974 SAF domain AU28_RS03160 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal AU28_RS03165 IPR004684 2-keto-3-deoxygluconate permease AU28_RS03170 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS03170 IPR003593 AAA+ ATPase domain AU28_RS03170 IPR009057 Homeodomain-like AU28_RS03170 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal AU28_RS03170 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AU28_RS03170 IPR025944 Sigma-54 interaction domain, conserved site AU28_RS03170 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03175 IPR009912 Protein of unknown function DUF1451 AU28_RS03180 IPR006597 Sel1-like AU28_RS03180 IPR011990 Tetratricopeptide-like helical domain AU28_RS03185 IPR009677 Protein of unknown function DUF1266 AU28_RS03190 IPR001623 DnaJ domain AU28_RS03195 IPR009677 Protein of unknown function DUF1266 AU28_RS03200 IPR001623 DnaJ domain AU28_RS03205 IPR013126 Heat shock protein 70 family AU28_RS03205 IPR018181 Heat shock protein 70, conserved site AU28_RS03205 IPR029047 Heat shock protein 70kD, peptide-binding domain AU28_RS03215 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AU28_RS03215 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site AU28_RS03215 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA AU28_RS03215 IPR023186 Inosine/uridine-preferring nucleoside hydrolase AU28_RS03220 IPR003439 ABC transporter-like AU28_RS03220 IPR003593 AAA+ ATPase domain AU28_RS03220 IPR017871 ABC transporter, conserved site AU28_RS03220 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03220 IPR030206 AU28_RS03220 AU28_RS03220 IPR030679 AU28_RS03220 AU28_RS03225 IPR000515 MetI-like domain AU28_RS03225 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AU28_RS03225 IPR030205 AU28_RS03225 AU28_RS03230 IPR000515 MetI-like domain AU28_RS03230 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AU28_RS03230 IPR030202 AU28_RS03230 AU28_RS03235 IPR001638 Extracellular solute-binding protein, family 3 AU28_RS03240 IPR003010 Carbon-nitrogen hydrolase AU28_RS03240 IPR004563 Apolipoprotein N-acyltransferase AU28_RS03245 IPR000644 CBS domain AU28_RS03245 IPR005170 Transporter-associated domain AU28_RS03245 IPR016166 FAD-binding, type 2 AU28_RS03245 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AU28_RS03250 IPR002036 Endoribonuclease YbeY AU28_RS03250 IPR020549 Endoribonuclease YbeY, conserved site AU28_RS03250 IPR023091 Metalloprotease catalytic domain, predicted AU28_RS03255 IPR003714 PhoH-like protein AU28_RS03255 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03260 IPR002792 TRAM domain AU28_RS03260 IPR005839 Methylthiotransferase AU28_RS03260 IPR006463 tRNA-i(6)A37 modification enzyme MiaB AU28_RS03260 IPR006638 Elongator protein 3/MiaB/NifB AU28_RS03260 IPR007197 Radical SAM AU28_RS03260 IPR013848 Methylthiotransferase, N-terminal AU28_RS03260 IPR020612 Methylthiotransferase, conserved site AU28_RS03260 IPR023404 Radical SAM, alpha/beta horseshoe AU28_RS03260 IPR023970 Methylthiotransferase/radical SAM-type protein AU28_RS03265 IPR002938 Monooxygenase, FAD-binding AU28_RS03265 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 AU28_RS03265 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AU28_RS03265 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS03310 IPR001962 Asparagine synthase AU28_RS03310 IPR006426 Asparagine synthase, glutamine-hydrolyzing AU28_RS03310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS03310 IPR017932 Glutamine amidotransferase type 2 domain AU28_RS03310 IPR029055 Nucleophile aminohydrolases, N-terminal AU28_RS03315 IPR006357 HAD-superfamily hydrolase, subfamily IIA AU28_RS03315 IPR023214 HAD-like domain AU28_RS03315 IPR023215 Nitrophenylphosphatase-like domain AU28_RS03320 IPR000600 ROK AU28_RS03320 IPR000835 MarR-type HTH domain AU28_RS03320 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS03325 IPR003764 N-acetylglucosamine-6-phosphate deacetylase AU28_RS03325 IPR006680 Amidohydrolase 1 AU28_RS03325 IPR011059 Metal-dependent hydrolase, composite domain AU28_RS03325 IPR032466 AU28_RS03325 AU28_RS03330 IPR004547 Glucosamine-6-phosphate isomerase AU28_RS03330 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase AU28_RS03330 IPR018321 Glucosamine-6-phosphate isomerase, conserved site AU28_RS03335 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 AU28_RS03335 IPR001996 Phosphotransferase system, IIB component, type 1 AU28_RS03335 IPR003352 Phosphotransferase system, EIIC AU28_RS03335 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component AU28_RS03335 IPR011055 Duplicated hybrid motif AU28_RS03335 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AU28_RS03340 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AU28_RS03340 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AU28_RS03340 IPR004514 Glutamine-tRNA synthetase AU28_RS03340 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain AU28_RS03340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS03340 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain AU28_RS03340 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AU28_RS03340 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain AU28_RS03340 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain AU28_RS03340 IPR022861 Glutamine-tRNA ligase, bacterial AU28_RS03345 IPR005318 Outer membrane porin, bacterial AU28_RS03345 IPR023614 Porin domain AU28_RS03350 IPR025727 YbfN-like lipoprotein AU28_RS03355 IPR004736 Citrate-proton symport AU28_RS03355 IPR005829 Sugar transporter, conserved site AU28_RS03355 IPR011701 Major facilitator superfamily AU28_RS03355 IPR020846 Major facilitator superfamily domain AU28_RS03360 IPR012830 Citrate utilization protein B AU28_RS03360 IPR023234 NarG-like domain AU28_RS03365 IPR003953 FAD binding domain AU28_RS03365 IPR012831 Precorrin 3B synthase CobZ AU28_RS03365 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS03365 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AU28_RS03370 IPR000847 Transcription regulator HTH, LysR AU28_RS03370 IPR005119 LysR, substrate-binding AU28_RS03370 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS03375 IPR002481 Ferric-uptake regulator AU28_RS03375 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS03380 IPR001226 Flavodoxin, conserved site AU28_RS03380 IPR008254 Flavodoxin/nitric oxide synthase AU28_RS03380 IPR010086 Flavodoxin, long chain AU28_RS03380 IPR029039 Flavoprotein-like AU28_RS03385 IPR002145 Ribbon-helix-helix protein, copG AU28_RS03390 IPR000073 Alpha/beta hydrolase fold-1 AU28_RS03390 IPR029058 Alpha/Beta hydrolase fold AU28_RS03395 IPR005621 Regulation modulator SeqA AU28_RS03395 IPR010985 Ribbon-helix-helix AU28_RS03395 IPR013321 Arc-type ribbon-helix-helix AU28_RS03395 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain AU28_RS03400 IPR005843 Alpha-D-phosphohexomutase, C-terminal AU28_RS03400 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AU28_RS03400 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AU28_RS03400 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AU28_RS03400 IPR005852 Phosphoglucomutase, alpha-D-glucose specific AU28_RS03400 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AU28_RS03400 IPR016066 Alpha-D-phosphohexomutase, conserved site AU28_RS03405 IPR012349 FMN-binding split barrel AU28_RS03405 IPR024747 Pyridoxamine 5'-phosphate oxidase-related AU28_RS03410 IPR002293 Amino acid/polyamine transporter I AU28_RS03410 IPR004754 Amino acid antiporter AU28_RS03410 IPR027566 Putrescine-ornithine antiporter AU28_RS03415 IPR000310 Orn/Lys/Arg decarboxylase, major domain AU28_RS03415 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal AU28_RS03415 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal AU28_RS03415 IPR011006 CheY-like superfamily AU28_RS03415 IPR011193 Ornithine/lysine/arginine decarboxylase AU28_RS03415 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS03415 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS03415 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS03415 IPR027464 Ornithine decarboxylase, N-terminal domain AU28_RS03415 IPR027568 Ornithine decarboxylase SpeF AU28_RS03425 IPR001789 Signal transduction response regulator, receiver domain AU28_RS03425 IPR001867 Signal transduction response regulator, C-terminal AU28_RS03425 IPR011006 CheY-like superfamily AU28_RS03425 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS03430 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS03430 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS03430 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal AU28_RS03430 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS03430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS03430 IPR025201 Sensor protein KdpD, transmembrane domain AU28_RS03430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03435 IPR003820 Potassium-transporting ATPase C chain AU28_RS03440 IPR001757 Cation-transporting P-type ATPase AU28_RS03440 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA AU28_RS03440 IPR008250 P-type ATPase, A domain AU28_RS03440 IPR018303 P-type ATPase, phosphorylation site AU28_RS03440 IPR023214 HAD-like domain AU28_RS03440 IPR023299 P-type ATPase, cytoplasmic domain N AU28_RS03445 IPR004623 Potassium-transporting ATPase A chain AU28_RS03450 IPR011726 K+ transporting P-type ATPase, F subunit AU28_RS03455 IPR019663 Uncharacterised protein YbfA AU28_RS03460 IPR002081 Cryptochrome/DNA photolyase, class 1 AU28_RS03460 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal AU28_RS03460 IPR006050 DNA photolyase, N-terminal AU28_RS03460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS03460 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal AU28_RS03465 IPR000109 Proton-dependent oligopeptide transporter family AU28_RS03465 IPR005279 Amino acid/peptide transporter family AU28_RS03465 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site AU28_RS03465 IPR020846 Major facilitator superfamily domain AU28_RS03465 IPR023777 Amino acid/peptide transporter family, dipeptide permease D AU28_RS03470 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AU28_RS03475 IPR003833 Allophanate hydrolase subunit 1 AU28_RS03475 IPR010016 Sensor histidine kinase inhibitor, KipI family AU28_RS03475 IPR024946 Arginine repressor C-terminal-like domain AU28_RS03475 IPR029000 Cyclophilin-like domain AU28_RS03480 IPR003778 Allophanate hydrolase subunit 2 AU28_RS03480 IPR029000 Cyclophilin-like domain AU28_RS03485 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AU28_RS03485 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AU28_RS03490 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase AU28_RS03490 IPR010979 Ribosomal protein S13-like, H2TH AU28_RS03490 IPR012319 DNA glycosylase/AP lyase, catalytic domain AU28_RS03490 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AU28_RS03490 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site AU28_RS03490 IPR023713 Endonuclease VIII AU28_RS03495 IPR007820 AbrB family AU28_RS03495 IPR017516 AbrB duplication AU28_RS03500 IPR002020 Citrate synthase-like AU28_RS03500 IPR010953 Citrate synthase, type I AU28_RS03500 IPR016142 Citrate synthase-like, large alpha subdomain AU28_RS03500 IPR016143 Citrate synthase-like, small alpha subdomain AU28_RS03500 IPR019810 Citrate synthase active site AU28_RS03500 IPR024176 Citrate synthase, bacterial-type AU28_RS03510 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit AU28_RS03510 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit AU28_RS03510 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site AU28_RS03515 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit AU28_RS03515 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor AU28_RS03520 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AU28_RS03520 IPR003953 FAD binding domain AU28_RS03520 IPR011281 Succinate dehydrogenase, flavoprotein subunit AU28_RS03520 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AU28_RS03520 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AU28_RS03520 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS03520 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AU28_RS03520 IPR030664 AU28_RS03520 AU28_RS03525 IPR001041 2Fe-2S ferredoxin-type domain AU28_RS03525 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AU28_RS03525 IPR009051 Alpha-helical ferredoxin AU28_RS03525 IPR012675 Beta-grasp domain AU28_RS03525 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS03525 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AU28_RS03530 IPR001017 Dehydrogenase, E1 component AU28_RS03530 IPR005475 Transketolase-like, pyrimidine-binding domain AU28_RS03530 IPR011603 2-oxoglutarate dehydrogenase E1 component AU28_RS03530 IPR029061 Thiamin diphosphate-binding fold AU28_RS03530 IPR031717 AU28_RS03530 AU28_RS03530 IPR032106 AU28_RS03530 AU28_RS03535 IPR000089 Biotin/lipoyl attachment AU28_RS03535 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AU28_RS03535 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AU28_RS03535 IPR004167 E3 binding AU28_RS03535 IPR006255 Dihydrolipoamide succinyltransferase AU28_RS03535 IPR011053 Single hybrid motif AU28_RS03535 IPR023213 Chloramphenicol acetyltransferase-like domain AU28_RS03540 IPR005809 Succinyl-CoA synthetase, beta subunit AU28_RS03540 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AU28_RS03540 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AU28_RS03540 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS03540 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS03540 IPR016102 Succinyl-CoA synthetase-like AU28_RS03540 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AU28_RS03545 IPR003781 CoA-binding AU28_RS03545 IPR005810 Succinyl-CoA ligase, alpha subunit AU28_RS03545 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AU28_RS03545 IPR016040 NAD(P)-binding domain AU28_RS03545 IPR016102 Succinyl-CoA synthetase-like AU28_RS03545 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AU28_RS03555 IPR002585 Cytochrome d ubiquinol oxidase, subunit I AU28_RS03560 IPR003317 Cytochrome d ubiquinol oxidase, subunit II AU28_RS03565 IPR011724 Cyd operon protein YbgT AU28_RS03565 IPR012994 Membrane bound YbgT-like AU28_RS03570 IPR011846 Cyd operon protein YbgE AU28_RS03575 IPR006683 Thioesterase superfamily AU28_RS03575 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family AU28_RS03575 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site AU28_RS03575 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase AU28_RS03575 IPR029069 HotDog domain AU28_RS03580 IPR002898 MotA/TolQ/ExbB proton channel AU28_RS03580 IPR014163 Tol-Pal system, TolQ AU28_RS03585 IPR003400 Biopolymer transport protein ExbD/TolR AU28_RS03585 IPR014168 Biopolymer transport, TolR AU28_RS03590 IPR014161 Tol-Pal system, TolA AU28_RS03595 IPR007195 TolB, N-terminal AU28_RS03595 IPR011659 WD40-like Beta Propeller AU28_RS03595 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB AU28_RS03595 IPR015943 WD40/YVTN repeat-like-containing domain AU28_RS03600 IPR006664 Outer membrane protein, bacterial AU28_RS03600 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AU28_RS03600 IPR006690 Outer membrane protein, OmpA-like, conserved site AU28_RS03600 IPR014169 Peptidoglycan-associated lipoprotein AU28_RS03605 IPR011990 Tetratricopeptide-like helical domain AU28_RS03605 IPR014162 Tol-Pal system, YbgF AU28_RS03605 IPR019734 Tetratricopeptide repeat AU28_RS03605 IPR032519 AU28_RS03605 AU28_RS03635 IPR003473 Quinolinate synthetase A AU28_RS03635 IPR023513 Quinolinate synthase A, type 1 AU28_RS03640 IPR006419 Nicotinamide mononucleotide transporter PnuC AU28_RS03645 IPR002524 Cation efflux protein AU28_RS03645 IPR023500 Zinc transporter ZitB AU28_RS03645 IPR027469 Cation efflux protein transmembrane domain AU28_RS03650 IPR020363 Uncharacterised protein family YbgS AU28_RS03655 IPR006218 DAHP synthetase I/KDSA AU28_RS03655 IPR006219 DHAP synthase, class 1 AU28_RS03655 IPR013785 Aldolase-type TIM barrel AU28_RS03660 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AU28_RS03665 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AU28_RS03670 IPR000847 Transcription regulator HTH, LysR AU28_RS03670 IPR005119 LysR, substrate-binding AU28_RS03670 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS03675 IPR000847 Transcription regulator HTH, LysR AU28_RS03675 IPR005119 LysR, substrate-binding AU28_RS03675 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS03680 IPR004680 Citrate transporter-like domain AU28_RS03685 IPR005899 Sodium ion-translocating decarboxylase AU28_RS03685 IPR023424 Oxaloacetate decarboxylase gamma chain, probable AU28_RS03690 IPR000089 Biotin/lipoyl attachment AU28_RS03690 IPR000891 Pyruvate carboxyltransferase AU28_RS03690 IPR001882 Biotin-binding site AU28_RS03690 IPR003379 Carboxylase, conserved domain AU28_RS03690 IPR005776 Oxaloacetate decarboxylase, alpha subunit AU28_RS03690 IPR011053 Single hybrid motif AU28_RS03690 IPR013785 Aldolase-type TIM barrel AU28_RS03695 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit AU28_RS03700 IPR002736 Triphosphoribosyl-dephospho-CoA protein AU28_RS03705 IPR000522 ABC transporter, permease protein AU28_RS03705 IPR029022 ABC transporter, BtuC-like AU28_RS03710 IPR003439 ABC transporter-like AU28_RS03710 IPR003593 AAA+ ATPase domain AU28_RS03710 IPR017871 ABC transporter, conserved site AU28_RS03710 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03715 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site AU28_RS03715 IPR005952 Phosphoglycerate mutase 1 AU28_RS03715 IPR013078 Histidine phosphatase superfamily, clade-1 AU28_RS03715 IPR029033 Histidine phosphatase superfamily AU28_RS03725 IPR000705 Galactokinase AU28_RS03725 IPR006203 GHMP kinase, ATP-binding, conserved site AU28_RS03725 IPR006204 GHMP kinase N-terminal domain AU28_RS03725 IPR006206 Mevalonate/galactokinase AU28_RS03725 IPR013750 GHMP kinase, C-terminal domain AU28_RS03725 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS03725 IPR019539 Galactokinase galactose-binding domain AU28_RS03725 IPR019741 Galactokinase, conserved site AU28_RS03725 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS03725 IPR022963 Galactokinase, bacterial AU28_RS03730 IPR001937 Galactose-1-phosphate uridyl transferase, class I AU28_RS03730 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal AU28_RS03730 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal AU28_RS03730 IPR011146 HIT-like domain AU28_RS03730 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site AU28_RS03735 IPR005886 UDP-glucose 4-epimerase GalE AU28_RS03735 IPR016040 NAD(P)-binding domain AU28_RS03740 IPR018682 Protein of unknown function DUF2167, membrane AU28_RS03745 IPR003439 ABC transporter-like AU28_RS03745 IPR003593 AAA+ ATPase domain AU28_RS03745 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03750 IPR000847 Transcription regulator HTH, LysR AU28_RS03750 IPR003725 Molybdenum-binding protein, N-terminal AU28_RS03750 IPR004606 Molybdenum-pterin binding AU28_RS03750 IPR005116 Transport-associated OB, type 1 AU28_RS03750 IPR008995 Molybdate/tungstate binding, C-terminal AU28_RS03750 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS03750 IPR016462 Molybdate-dependent transcriptional regulator, ModE AU28_RS03755 IPR019702 Protein of unknown function DUF2592 AU28_RS03760 IPR005950 Molybdenum ABC transporter, periplasmic binding protein AU28_RS03765 IPR000515 MetI-like domain AU28_RS03765 IPR011867 Molybdate ABC transporter, permease protein AU28_RS03770 IPR003439 ABC transporter-like AU28_RS03770 IPR003593 AAA+ ATPase domain AU28_RS03770 IPR004606 Molybdenum-pterin binding AU28_RS03770 IPR005116 Transport-associated OB, type 1 AU28_RS03770 IPR008995 Molybdate/tungstate binding, C-terminal AU28_RS03770 IPR011868 Molybdate ABC transporter, ATP-binding protein AU28_RS03770 IPR017871 ABC transporter, conserved site AU28_RS03770 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03775 IPR000150 Cof protein AU28_RS03775 IPR006379 HAD-superfamily hydrolase, subfamily IIB AU28_RS03775 IPR023214 HAD-like domain AU28_RS03780 IPR011045 Nitrous oxide reductase, N-terminal AU28_RS03780 IPR015943 WD40/YVTN repeat-like-containing domain AU28_RS03780 IPR019405 Lactonase, 7-bladed beta propeller AU28_RS03780 IPR022528 6-phosphogluconolactonase, YbhE-type AU28_RS03785 IPR000070 Pectinesterase, catalytic AU28_RS03785 IPR011050 Pectin lyase fold/virulence factor AU28_RS03785 IPR012334 Pectin lyase fold AU28_RS03790 IPR005920 Imidazolonepropionase AU28_RS03790 IPR006680 Amidohydrolase 1 AU28_RS03790 IPR011059 Metal-dependent hydrolase, composite domain AU28_RS03790 IPR032466 AU28_RS03790 AU28_RS03795 IPR005923 Formiminoglutamase AU28_RS03795 IPR006035 Ureohydrolase AU28_RS03795 IPR023696 Ureohydrolase domain AU28_RS03800 IPR000524 Transcription regulator HTH, GntR AU28_RS03800 IPR010248 Histidine utilization repressor AU28_RS03800 IPR011663 UbiC transcription regulator-associated AU28_RS03800 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS03800 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AU28_RS03805 IPR023636 Urocanase conserved site AU28_RS03805 IPR023637 Urocanase AU28_RS03810 IPR001106 Aromatic amino acid lyase AU28_RS03810 IPR005921 Histidine ammonia-lyase AU28_RS03810 IPR008948 L-Aspartase-like AU28_RS03810 IPR022313 Phenylalanine/histidine ammonia-lyases, active site AU28_RS03810 IPR024083 Fumarase/histidase, N-terminal AU28_RS03815 IPR005247 YbhB/YbcL AU28_RS03815 IPR008914 Phosphatidylethanolamine-binding protein PEBP AU28_RS03820 IPR005814 Aminotransferase class-III AU28_RS03820 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA AU28_RS03820 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS03820 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS03820 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS03825 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB AU28_RS03825 IPR006638 Elongator protein 3/MiaB/NifB AU28_RS03825 IPR007197 Radical SAM AU28_RS03825 IPR010722 Biotin and thiamin synthesis-associated domain AU28_RS03825 IPR013785 Aldolase-type TIM barrel AU28_RS03825 IPR024177 Biotin synthase AU28_RS03830 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AU28_RS03830 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type AU28_RS03830 IPR004839 Aminotransferase, class I/classII AU28_RS03830 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS03830 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS03830 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS03830 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria AU28_RS03835 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AU28_RS03835 IPR013216 Methyltransferase type 11 AU28_RS03835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS03840 IPR004472 Dethiobiotin synthase BioD AU28_RS03840 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03845 IPR001650 Helicase, C-terminal AU28_RS03845 IPR001943 UVR domain AU28_RS03845 IPR004807 UvrABC system, subunit B AU28_RS03845 IPR006935 Helicase/UvrB domain AU28_RS03845 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS03845 IPR024759 UvrB, YAD/RRR-motif-containing domain AU28_RS03845 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03860 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AU28_RS03860 IPR010119 Gluconeogenesis factor AU28_RS03865 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AU28_RS03865 IPR006638 Elongator protein 3/MiaB/NifB AU28_RS03865 IPR007197 Radical SAM AU28_RS03865 IPR010505 Molybdenum cofactor synthesis C-terminal AU28_RS03865 IPR013483 Molybdenum cofactor biosynthesis protein A AU28_RS03865 IPR013785 Aldolase-type TIM barrel AU28_RS03870 IPR001453 Molybdopterin binding domain AU28_RS03870 IPR008284 Molybdenum cofactor biosynthesis, conserved site AU28_RS03870 IPR012245 Molybdenum cofactor biosynthesis protein MoaB AU28_RS03870 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria AU28_RS03875 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain AU28_RS03875 IPR023045 Molybdenum cofactor biosynthesis C AU28_RS03875 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type AU28_RS03880 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 AU28_RS03880 IPR010034 Molybdopterin converting factor, subunit 1 AU28_RS03880 IPR012675 Beta-grasp domain AU28_RS03880 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AU28_RS03885 IPR003448 Molybdopterin biosynthesis MoaE AU28_RS03890 IPR006214 Bax inhibitor 1-related AU28_RS03910 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AU28_RS03915 IPR001736 Phospholipase D/Transphosphatidylase AU28_RS03915 IPR025202 Phospholipase D-like domain AU28_RS03915 IPR030872 AU28_RS03915 AU28_RS03920 IPR005135 Endonuclease/exonuclease/phosphatase AU28_RS03925 IPR021303 Uncharacterised protein family, inner membrane, YbhQ AU28_RS03930 IPR000412 ABC-2 transporter AU28_RS03940 IPR003439 ABC transporter-like AU28_RS03940 IPR003593 AAA+ ATPase domain AU28_RS03940 IPR017871 ABC transporter, conserved site AU28_RS03940 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03945 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG AU28_RS03945 IPR032317 AU28_RS03945 AU28_RS03950 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS03950 IPR009057 Homeodomain-like AU28_RS03950 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS03950 IPR015292 Transcription regulator YbiH, C-terminal AU28_RS03950 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS03950 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AU28_RS03955 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AU28_RS03955 IPR001650 Helicase, C-terminal AU28_RS03955 IPR011545 DEAD/DEAH box helicase domain AU28_RS03955 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS03955 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03955 IPR028622 ATP-dependent RNA helicase RhlE AU28_RS03960 IPR006554 Helicase-like, DEXD box c2 type AU28_RS03960 IPR006555 ATP-dependent helicase, C-terminal AU28_RS03960 IPR010614 DEAD2 AU28_RS03960 IPR011545 DEAD/DEAH box helicase domain AU28_RS03960 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS03960 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03965 IPR000312 Glycosyl transferase, family 3 AU28_RS03965 IPR017459 Glycosyl transferase family 3, N-terminal domain AU28_RS03970 IPR010854 Domain of unknown function DUF1471 AU28_RS03970 IPR025543 Dodecin-like AU28_RS03980 IPR000962 Zinc finger, DksA/TraR C4-type AU28_RS03980 IPR012783 Zinc finger, C4 DksA/TraR-type AU28_RS03980 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AU28_RS03980 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AU28_RS03985 IPR010286 Ribosomal RNA large subunit methyltransferase F-like AU28_RS03985 IPR016909 Ribosomal RNA large subunit methyltransferase F AU28_RS03985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS03990 IPR006685 Mechanosensitive ion channel MscS AU28_RS03990 IPR010920 Like-Sm (LSM) domain AU28_RS03990 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AU28_RS03990 IPR011066 Mechanosensitive ion channel MscS, C-terminal AU28_RS03995 IPR003439 ABC transporter-like AU28_RS03995 IPR003593 AAA+ ATPase domain AU28_RS03995 IPR017871 ABC transporter, conserved site AU28_RS03995 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS03995 IPR030679 AU28_RS03995 AU28_RS04000 IPR000515 MetI-like domain AU28_RS04000 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AU28_RS04005 IPR001320 Ionotropic glutamate receptor AU28_RS04005 IPR001638 Extracellular solute-binding protein, family 3 AU28_RS04005 IPR018313 Extracellular solute-binding protein, family 3, conserved site AU28_RS04010 IPR002177 DNA-binding protein Dps AU28_RS04010 IPR008331 Ferritin/DPS protein domain AU28_RS04010 IPR009078 Ferritin-like superfamily AU28_RS04010 IPR012347 Ferritin-related AU28_RS04010 IPR023067 DNA protection during starvation protein, gammaproteobacteria AU28_RS04010 IPR023188 DNA-binding protein Dps, conserved site AU28_RS04015 IPR000620 Drug/metabolite transporter AU28_RS04020 IPR000758 Virulence-related outer membrane protein AU28_RS04020 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS04020 IPR027385 Outer membrane protein beta-barrel AU28_RS04025 IPR000917 Sulfatase AU28_RS04025 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS04025 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS04030 IPR001367 Iron dependent repressor-like, metal binding and dimerisation domain AU28_RS04030 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS04030 IPR022687 Iron dependent repressor, N-terminal AU28_RS04030 IPR022689 Iron dependent repressor, diptheria toxin type AU28_RS04035 IPR004680 Citrate transporter-like domain AU28_RS04040 IPR005490 L,D-transpeptidase catalytic domain AU28_RS04045 IPR003439 ABC transporter-like AU28_RS04045 IPR003593 AAA+ ATPase domain AU28_RS04045 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04045 IPR032781 AU28_RS04045 AU28_RS04050 IPR025357 Domain of unknown function DUF4261 AU28_RS04060 IPR010856 Protein of unknown function DUF1479 AU28_RS04060 IPR027443 Isopenicillin N synthase-like AU28_RS04065 IPR000150 Cof protein AU28_RS04065 IPR006379 HAD-superfamily hydrolase, subfamily IIB AU28_RS04065 IPR023214 HAD-like domain AU28_RS04070 IPR001150 Glycine radical domain AU28_RS04070 IPR004184 Pyruvate formate lyase domain AU28_RS04070 IPR005949 Formate acetyltransferase AU28_RS04070 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family AU28_RS04070 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AU28_RS04075 IPR001989 Radical-activating enzyme, conserved site AU28_RS04075 IPR007197 Radical SAM AU28_RS04075 IPR012839 Glycyl radical enzyme activase AU28_RS04080 IPR000594 UBA/THIF-type NAD/FAD binding fold AU28_RS04080 IPR012730 Molybdopterin synthase sulfurylase MoeB AU28_RS04080 IPR016040 NAD(P)-binding domain AU28_RS04085 IPR001453 Molybdopterin binding domain AU28_RS04085 IPR005110 MoeA, N-terminal and linker domain AU28_RS04085 IPR005111 MoeA, C-terminal, domain IV AU28_RS04085 IPR008284 Molybdenum cofactor biosynthesis, conserved site AU28_RS04090 IPR000246 Peptidase T2, asparaginase 2 AU28_RS04090 IPR029055 Nucleophile aminohydrolases, N-terminal AU28_RS04095 IPR003439 ABC transporter-like AU28_RS04095 IPR003593 AAA+ ATPase domain AU28_RS04095 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AU28_RS04095 IPR017871 ABC transporter, conserved site AU28_RS04095 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04100 IPR000914 Bacterial extracellular solute-binding protein, family 5 AU28_RS04100 IPR030678 AU28_RS04100 AU28_RS04105 IPR000515 MetI-like domain AU28_RS04110 IPR000515 MetI-like domain AU28_RS04110 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AU28_RS04115 IPR005839 Methylthiotransferase AU28_RS04115 IPR005840 Ribosomal protein S12 methylthiotransferase RimO AU28_RS04115 IPR006638 Elongator protein 3/MiaB/NifB AU28_RS04115 IPR007197 Radical SAM AU28_RS04115 IPR012340 Nucleic acid-binding, OB-fold AU28_RS04115 IPR013848 Methylthiotransferase, N-terminal AU28_RS04115 IPR020612 Methylthiotransferase, conserved site AU28_RS04115 IPR023404 Radical SAM, alpha/beta horseshoe AU28_RS04115 IPR023970 Methylthiotransferase/radical SAM-type protein AU28_RS04120 IPR020359 Biofilm regulator BssR AU28_RS04125 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AU28_RS04125 IPR011206 Citrate lyase beta subunit-like AU28_RS04125 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS04130 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site AU28_RS04130 IPR012255 Electron transfer flavoprotein, beta subunit AU28_RS04130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS04130 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AU28_RS04135 IPR001308 Electron transfer flavoprotein, alpha subunit AU28_RS04135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS04135 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AU28_RS04135 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AU28_RS04135 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site AU28_RS04135 IPR029035 DHS-like NAD/FAD-binding domain AU28_RS04145 IPR006089 Acyl-CoA dehydrogenase, conserved site AU28_RS04145 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AU28_RS04145 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AU28_RS04145 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AU28_RS04145 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AU28_RS04150 IPR007859 Electron transfer flavoprotein-ubiquinone oxidoreductase AU28_RS04150 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS04155 IPR000847 Transcription regulator HTH, LysR AU28_RS04155 IPR005119 LysR, substrate-binding AU28_RS04155 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS04165 IPR003220 InsA N-terminal domain AU28_RS04165 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AU28_RS04165 IPR011042 Six-bladed beta-propeller, TolB-like AU28_RS04165 IPR012938 Glucose/Sorbosone dehydrogenase AU28_RS04170 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AU28_RS04170 IPR011042 Six-bladed beta-propeller, TolB-like AU28_RS04170 IPR012938 Glucose/Sorbosone dehydrogenase AU28_RS04175 IPR004045 Glutathione S-transferase, N-terminal AU28_RS04175 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS04175 IPR012336 Thioredoxin-like fold AU28_RS04180 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AU28_RS04180 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS04180 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AU28_RS04180 IPR015956 Penicillin-binding protein-associated AU28_RS04180 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AU28_RS04185 IPR001034 HTH DeoR N-terminal domain AU28_RS04185 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS04185 IPR014036 DeoR C-terminal sensor domain AU28_RS04185 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS04190 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AU28_RS04195 IPR005829 Sugar transporter, conserved site AU28_RS04195 IPR011701 Major facilitator superfamily AU28_RS04195 IPR020846 Major facilitator superfamily domain AU28_RS04200 IPR000150 Cof protein AU28_RS04200 IPR006379 HAD-superfamily hydrolase, subfamily IIB AU28_RS04200 IPR023214 HAD-like domain AU28_RS04205 IPR011701 Major facilitator superfamily AU28_RS04205 IPR020846 Major facilitator superfamily domain AU28_RS04210 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS04210 IPR009057 Homeodomain-like AU28_RS04210 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS04210 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS04215 IPR006037 Regulator of K+ conductance, C-terminal AU28_RS04215 IPR006512 YidE/YbjL duplication AU28_RS04215 IPR023017 Transport protein YbjL, putative AU28_RS04220 IPR020368 Uncharacterised protein family YbjM AU28_RS04225 IPR002109 Glutaredoxin AU28_RS04225 IPR011767 Glutaredoxin active site AU28_RS04225 IPR011902 Glutaredoxin, GrxA AU28_RS04225 IPR012336 Thioredoxin-like fold AU28_RS04225 IPR014025 Glutaredoxin subgroup AU28_RS04230 IPR010815 Protein of unknown function DUF1418 AU28_RS04235 IPR000415 Nitroreductase-like AU28_RS04235 IPR016446 Flavin oxidoreductase Frp family AU28_RS04235 IPR029479 Nitroreductase AU28_RS04240 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX AU28_RS04240 IPR013651 ATP-grasp fold, RimK-type AU28_RS04240 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS04240 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS04240 IPR016185 Pre-ATP-grasp domain AU28_RS04240 IPR023533 Ribosomal S6 modification enzyme RimK AU28_RS04245 IPR019660 Putative sensory transduction regulator YbjN AU28_RS04250 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein AU28_RS04255 IPR003439 ABC transporter-like AU28_RS04255 IPR003593 AAA+ ATPase domain AU28_RS04255 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AU28_RS04255 IPR008995 Molybdate/tungstate binding, C-terminal AU28_RS04255 IPR013611 Transport-associated OB, type 2 AU28_RS04255 IPR017871 ABC transporter, conserved site AU28_RS04255 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04260 IPR000515 MetI-like domain AU28_RS04265 IPR000515 MetI-like domain AU28_RS04270 IPR019703 Protein of unknown function DUF2593 AU28_RS04275 IPR010280 (Uracil-5)-methyltransferase family AU28_RS04275 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC AU28_RS04275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS04275 IPR030390 AU28_RS04275 AU28_RS04275 IPR030391 AU28_RS04275 AU28_RS04280 IPR004703 Phosphotransferase system, sugar-specific permease component AU28_RS04285 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS04290 IPR000917 Sulfatase AU28_RS04290 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS04290 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS04295 IPR001320 Ionotropic glutamate receptor AU28_RS04295 IPR001638 Extracellular solute-binding protein, family 3 AU28_RS04295 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein AU28_RS04295 IPR018313 Extracellular solute-binding protein, family 3, conserved site AU28_RS04300 IPR000515 MetI-like domain AU28_RS04300 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AU28_RS04305 IPR000515 MetI-like domain AU28_RS04305 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AU28_RS04310 IPR001320 Ionotropic glutamate receptor AU28_RS04310 IPR001638 Extracellular solute-binding protein, family 3 AU28_RS04310 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein AU28_RS04310 IPR018313 Extracellular solute-binding protein, family 3, conserved site AU28_RS04315 IPR003439 ABC transporter-like AU28_RS04315 IPR003593 AAA+ ATPase domain AU28_RS04315 IPR017871 ABC transporter, conserved site AU28_RS04315 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04315 IPR030679 AU28_RS04315 AU28_RS04320 IPR024289 Domain of unknown function DUF3828 AU28_RS04325 IPR002765 Uncharacterised protein family UPF0145 AU28_RS04330 IPR002477 Peptidoglycan binding-like AU28_RS04330 IPR002502 N-acetylmuramoyl-L-alanine amidase domain AU28_RS04335 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AU28_RS04335 IPR016040 NAD(P)-binding domain AU28_RS04340 IPR016040 NAD(P)-binding domain AU28_RS04340 IPR021295 Protein of unknown function DUF2867 AU28_RS04345 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase AU28_RS04345 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS04345 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS04345 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS04345 IPR023603 Threonine aldolase AU28_RS04350 IPR000399 TPP-binding enzyme, conserved site AU28_RS04350 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AU28_RS04350 IPR012000 Thiamine pyrophosphate enzyme, central domain AU28_RS04350 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AU28_RS04350 IPR029035 DHS-like NAD/FAD-binding domain AU28_RS04350 IPR029061 Thiamin diphosphate-binding fold AU28_RS04355 IPR000951 Phthalate dioxygenase reductase AU28_RS04355 IPR001041 2Fe-2S ferredoxin-type domain AU28_RS04355 IPR001433 Oxidoreductase FAD/NAD(P)-binding AU28_RS04355 IPR008333 Oxidoreductase, FAD-binding domain AU28_RS04355 IPR012675 Beta-grasp domain AU28_RS04355 IPR017938 Riboflavin synthase-like beta-barrel AU28_RS04360 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase AU28_RS04360 IPR010048 Hydroxylamine reductase AU28_RS04360 IPR011254 Prismane-like AU28_RS04360 IPR016099 Prismane-like, alpha/beta-sandwich AU28_RS04360 IPR016100 Prismane, alpha-bundle AU28_RS04365 IPR005642 Protein of unknown function DUF340, prokaryotic membrane AU28_RS04370 IPR022602 Protein of unknown function DUF2813 AU28_RS04370 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04375 IPR007488 Protein of unknown function DUF535 AU28_RS04380 IPR006143 RND efflux pump, membrane fusion protein AU28_RS04380 IPR030190 AU28_RS04380 AU28_RS04380 IPR032317 AU28_RS04380 AU28_RS04385 IPR003439 ABC transporter-like AU28_RS04385 IPR003593 AAA+ ATPase domain AU28_RS04385 IPR003838 Permease FtsX-like AU28_RS04385 IPR017871 ABC transporter, conserved site AU28_RS04385 IPR025857 MacB-like periplasmic core domain AU28_RS04385 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04390 IPR002059 Cold-shock protein, DNA-binding AU28_RS04390 IPR011129 Cold shock protein AU28_RS04390 IPR012156 Cold shock, CspA AU28_RS04390 IPR012340 Nucleic acid-binding, OB-fold AU28_RS04390 IPR012751 CspD, cold shock AU28_RS04390 IPR019844 Cold-shock conserved site AU28_RS04395 IPR003769 Adaptor protein ClpS, core AU28_RS04395 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AU28_RS04395 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AU28_RS04400 IPR001270 ClpA/B family AU28_RS04400 IPR003593 AAA+ ATPase domain AU28_RS04400 IPR003959 ATPase, AAA-type, core AU28_RS04400 IPR004176 Clp, N-terminal AU28_RS04400 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA AU28_RS04400 IPR018368 ClpA/B, conserved site 1 AU28_RS04400 IPR019489 Clp ATPase, C-terminal AU28_RS04400 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04400 IPR028299 ClpA/B, conserved site 2 AU28_RS04410 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS04410 IPR013762 Integrase-like, catalytic core AU28_RS04425 IPR000868 Isochorismatase-like AU28_RS04430 IPR003829 Pirin, N-terminal domain AU28_RS04430 IPR008778 Pirin, C-terminal domain AU28_RS04430 IPR011051 RmlC-like cupin domain AU28_RS04430 IPR012093 Pirin AU28_RS04430 IPR014710 RmlC-like jelly roll fold AU28_RS04435 IPR000847 Transcription regulator HTH, LysR AU28_RS04435 IPR005119 LysR, substrate-binding AU28_RS04435 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS04440 IPR004368 Translation initiation factor IF-1 AU28_RS04440 IPR006196 RNA-binding domain, S1, IF1 type AU28_RS04440 IPR012340 Nucleic acid-binding, OB-fold AU28_RS04440 IPR022967 RNA-binding domain, S1 AU28_RS04450 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase AU28_RS04450 IPR016181 Acyl-CoA N-acyltransferase AU28_RS04455 IPR003439 ABC transporter-like AU28_RS04455 IPR003593 AAA+ ATPase domain AU28_RS04455 IPR011527 ABC transporter type 1, transmembrane domain AU28_RS04455 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC AU28_RS04455 IPR017871 ABC transporter, conserved site AU28_RS04455 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04460 IPR003439 ABC transporter-like AU28_RS04460 IPR003593 AAA+ ATPase domain AU28_RS04460 IPR011527 ABC transporter type 1, transmembrane domain AU28_RS04460 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD AU28_RS04460 IPR017871 ABC transporter, conserved site AU28_RS04460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04465 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II AU28_RS04465 IPR005982 Thioredoxin reductase AU28_RS04465 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AU28_RS04465 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS04470 IPR000485 AsnC-type HTH domain AU28_RS04470 IPR011008 Dimeric alpha-beta barrel AU28_RS04470 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS04470 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AU28_RS04470 IPR019887 Transcription regulator AsnC-type, C-terminal AU28_RS04470 IPR019888 Transcription regulator AsnC-type AU28_RS04475 IPR002543 FtsK domain AU28_RS04475 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS04475 IPR018541 FtsK gamma domain AU28_RS04475 IPR025199 Domain of unknown function DUF4117 AU28_RS04475 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04480 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AU28_RS04480 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria AU28_RS04480 IPR029046 Lipoprotein localisation LolA/LolB/LppX AU28_RS04485 IPR003593 AAA+ ATPase domain AU28_RS04485 IPR003959 ATPase, AAA-type, core AU28_RS04485 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AU28_RS04485 IPR021886 MgsA AAA+ ATPase C-terminal AU28_RS04485 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04485 IPR032423 AU28_RS04485 AU28_RS04490 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain AU28_RS04490 IPR002317 Serine-tRNA ligase, type1 AU28_RS04490 IPR010978 tRNA-binding arm AU28_RS04490 IPR015866 Serine-tRNA synthetase, type1, N-terminal AU28_RS04495 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS04495 IPR006656 Molybdopterin oxidoreductase AU28_RS04495 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS04495 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS04495 IPR009010 Aspartate decarboxylase-like domain AU28_RS04495 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE AU28_RS04495 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AU28_RS04495 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AU28_RS04500 IPR014297 Dimethylsulphoxide reductase, chain B AU28_RS04500 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS04500 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS04505 IPR007059 DMSO reductase anchor subunit (DmsC) AU28_RS04515 IPR011701 Major facilitator superfamily AU28_RS04515 IPR020846 Major facilitator superfamily domain AU28_RS04515 IPR023745 MSF-type transporter, YcaD AU28_RS04520 IPR002293 Amino acid/polyamine transporter I AU28_RS04525 IPR001989 Radical-activating enzyme, conserved site AU28_RS04525 IPR007197 Radical SAM AU28_RS04525 IPR012838 Pyruvate formate-lyase activating enzyme AU28_RS04525 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted AU28_RS04535 IPR022747 Salmonella outer protein D AU28_RS04540 IPR001150 Glycine radical domain AU28_RS04540 IPR004184 Pyruvate formate lyase domain AU28_RS04540 IPR005949 Formate acetyltransferase AU28_RS04540 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AU28_RS04545 IPR000292 Formate/nitrite transporter AU28_RS04545 IPR023271 Aquaporin-like AU28_RS04545 IPR023999 Formate transporter FocA, putative AU28_RS04545 IPR024002 Formate/nitrite transporter, conserved site AU28_RS04550 IPR003776 YcaO-like domain AU28_RS04555 IPR007353 Protein of unknown function DUF421 AU28_RS04555 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AU28_RS04560 IPR000192 Aminotransferase class V domain AU28_RS04560 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS04560 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS04560 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS04560 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site AU28_RS04560 IPR022278 Phosphoserine aminotransferase AU28_RS04565 IPR001986 Enolpyruvate transferase domain AU28_RS04565 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase AU28_RS04565 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AU28_RS04565 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site AU28_RS04570 IPR001915 Peptidase M48 AU28_RS04575 IPR003136 Cytidylate kinase AU28_RS04575 IPR011994 Cytidylate kinase domain AU28_RS04575 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04580 IPR000110 Ribosomal protein S1 AU28_RS04580 IPR003029 Ribosomal protein S1, RNA-binding domain AU28_RS04580 IPR012340 Nucleic acid-binding, OB-fold AU28_RS04580 IPR022967 RNA-binding domain, S1 AU28_RS04585 IPR000119 Histone-like bacterial DNA-binding protein AU28_RS04585 IPR005685 Integration host factor, beta subunit AU28_RS04585 IPR010992 Integration host factor (IHF)-like DNA-binding domain AU28_RS04585 IPR020816 Histone-like DNA-binding protein, conserved site AU28_RS04590 IPR001279 Beta-lactamase-like AU28_RS04590 IPR004477 ComEC/Rec2-related protein AU28_RS04590 IPR004797 Competence protein ComEC/Rec2 AU28_RS04590 IPR025405 Domain of unknown function DUF4131 AU28_RS04595 IPR003439 ABC transporter-like AU28_RS04595 IPR003593 AAA+ ATPase domain AU28_RS04595 IPR011527 ABC transporter type 1, transmembrane domain AU28_RS04595 IPR011917 ABC transporter, lipid A export, MsbA AU28_RS04595 IPR017871 ABC transporter, conserved site AU28_RS04595 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04600 IPR003758 Tetraacyldisaccharide 4'-kinase AU28_RS04600 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04605 IPR009351 Protein of unknown function DUF1006 AU28_RS04610 IPR005651 Uncharacterised protein family UPF0434/Trm112 AU28_RS04615 IPR003329 Acylneuraminate cytidylyltransferase AU28_RS04615 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase AU28_RS04615 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS04620 IPR002575 Aminoglycoside phosphotransferase AU28_RS04620 IPR011009 Protein kinase-like domain AU28_RS04625 IPR003848 Domain of unknown function DUF218 AU28_RS04625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS04630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS04635 IPR005582 Chromosome partition protein MukF AU28_RS04635 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS04635 IPR033439 AU28_RS04635 AU28_RS04635 IPR033440 AU28_RS04635 AU28_RS04635 IPR033441 AU28_RS04635 AU28_RS04640 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE AU28_RS04645 IPR007406 MukB, N-terminal domain AU28_RS04645 IPR012090 Chromosome partition protein MukB AU28_RS04645 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04645 IPR032520 AU28_RS04645 AU28_RS04650 IPR002477 Peptidoglycan binding-like AU28_RS04650 IPR005490 L,D-transpeptidase catalytic domain AU28_RS04655 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AU28_RS04655 IPR010275 Protein of unknown function DUF882 AU28_RS04660 IPR001279 Beta-lactamase-like AU28_RS04665 IPR000796 Aspartate/other aminotransferase AU28_RS04665 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AU28_RS04665 IPR004839 Aminotransferase, class I/classII AU28_RS04665 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS04665 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS04670 IPR001702 Porin, Gram-negative type AU28_RS04670 IPR001897 Porin, gammaproteobacterial AU28_RS04670 IPR013793 Porin, Gram-negative type, conserved site AU28_RS04670 IPR023614 Porin domain AU28_RS04675 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AU28_RS04675 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AU28_RS04675 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AU28_RS04675 IPR004522 Asparagine-tRNA ligase AU28_RS04675 IPR012340 Nucleic acid-binding, OB-fold AU28_RS04675 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like AU28_RS04680 IPR000485 AsnC-type HTH domain AU28_RS04680 IPR011008 Dimeric alpha-beta barrel AU28_RS04680 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS04680 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AU28_RS04680 IPR019887 Transcription regulator AsnC-type, C-terminal AU28_RS04680 IPR019888 Transcription regulator AsnC-type AU28_RS04685 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS04685 IPR010081 Diaminopropionate ammonia-lyase AU28_RS04685 IPR019871 Diaminopropionate ammonia-lyase, subgroup AU28_RS04690 IPR001463 Sodium:alanine symporter AU28_RS04695 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AU28_RS04695 IPR006406 Nicotinate phosphoribosyltransferase AU28_RS04695 IPR007229 Nicotinate phosphoribosyltransferase family AU28_RS04700 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS04700 IPR013762 Integrase-like, catalytic core AU28_RS04700 IPR018330 RecT family AU28_RS04715 IPR011083 Phage tail collar domain AU28_RS04720 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AU28_RS04730 IPR028907 Tox-PLDMTX domain AU28_RS04735 IPR004291 Transposase, IS66 AU28_RS04740 IPR003738 Protein of unknown function DUF159 AU28_RS04755 IPR010391 DNA damage-inducible protein DinI-like AU28_RS04760 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AU28_RS04760 IPR012779 Peptidase M1, alanyl aminopeptidase AU28_RS04760 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal AU28_RS04760 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AU28_RS04765 IPR001295 Dihydroorotate dehydrogenase, conserved site AU28_RS04765 IPR005719 Dihydroorotate dehydrogenase, class 2 AU28_RS04765 IPR005720 Dihydroorotate dehydrogenase domain AU28_RS04765 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 AU28_RS04765 IPR013785 Aldolase-type TIM barrel AU28_RS04770 IPR009809 Cell division protein ZapC AU28_RS04775 IPR001041 2Fe-2S ferredoxin-type domain AU28_RS04775 IPR005302 Molybdenum cofactor sulfurase, C-terminal AU28_RS04775 IPR005303 MOSC, N-terminal beta barrel AU28_RS04775 IPR011037 Pyruvate kinase-like, insert domain AU28_RS04775 IPR012675 Beta-grasp domain AU28_RS04780 IPR000241 Putative RNA methylase domain AU28_RS04780 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS04780 IPR004114 THUMP AU28_RS04780 IPR017244 Ribosomal RNA large subunit methyltransferase K/L AU28_RS04780 IPR019614 S-adenosylmethionine-dependent methyltransferase AU28_RS04780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS04785 IPR003439 ABC transporter-like AU28_RS04785 IPR003593 AAA+ ATPase domain AU28_RS04785 IPR017871 ABC transporter, conserved site AU28_RS04785 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04785 IPR032524 AU28_RS04785 AU28_RS04785 IPR032781 AU28_RS04785 AU28_RS04790 IPR005219 Conserved hypothetical protein CHP00155 AU28_RS04790 IPR007498 Paraquat-inducible protein A AU28_RS04795 IPR003399 Mammalian cell entry-related AU28_RS04800 IPR005586 Protein of unknown function DUF330 AU28_RS04805 IPR007040 Ribosome modulation factor AU28_RS04805 IPR023200 Ribosome modulation factor-like domain AU28_RS04810 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA AU28_RS04810 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AU28_RS04810 IPR029069 HotDog domain AU28_RS04815 IPR008269 Peptidase S16, Lon C-terminal AU28_RS04815 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS04815 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS04815 IPR027065 Lon protease AU28_RS04820 IPR009390 Macrodomain Ter protein, MatP AU28_RS04825 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain AU28_RS04825 IPR002368 Outer membrane protein, OmpA AU28_RS04825 IPR006664 Outer membrane protein, bacterial AU28_RS04825 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AU28_RS04825 IPR006690 Outer membrane protein, OmpA-like, conserved site AU28_RS04825 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS04830 IPR004596 Cell division suppressor protein, SulA AU28_RS04830 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04835 IPR007076 TfoX, N-terminal AU28_RS04835 IPR007077 TfoX, C-terminal AU28_RS04835 IPR026256 Transcriptional regulator, TfoX/Sxy-type AU28_RS04840 IPR010019 Integral membrane protein, YccS AU28_RS04840 IPR010020 Integral membrane protein, YccS/YhfK AU28_RS04840 IPR032692 AU28_RS04840 AU28_RS04845 IPR005185 Protein of unknown function DUF307 AU28_RS04845 IPR031308 AU28_RS04845 AU28_RS04850 IPR000212 DNA helicase, UvrD/REP type AU28_RS04850 IPR014016 UvrD-like Helicase, ATP-binding domain AU28_RS04850 IPR014017 DNA helicase, UvrD-like, C-terminal AU28_RS04850 IPR022161 DNA helicase IV, N-terminal domain AU28_RS04850 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS04855 IPR004363 Methylglyoxal synthase AU28_RS04855 IPR011607 Methylglyoxal synthase-like domain AU28_RS04855 IPR018148 Methylglyoxal synthase, active site AU28_RS04860 IPR018635 Uncharacterised protein family UPF0319 AU28_RS04865 IPR003781 CoA-binding AU28_RS04865 IPR016040 NAD(P)-binding domain AU28_RS04870 IPR011722 Hemimethylated DNA-binding domain AU28_RS04870 IPR022866 Heat shock protein HspQ AU28_RS04875 IPR002478 PUA domain AU28_RS04875 IPR015947 PUA-like domain AU28_RS04875 IPR019614 S-adenosylmethionine-dependent methyltransferase AU28_RS04875 IPR023542 rRNA large subunit methyltransferase I AU28_RS04875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS04880 IPR005247 YbhB/YbcL AU28_RS04880 IPR008914 Phosphatidylethanolamine-binding protein PEBP AU28_RS04885 IPR003313 AraC-type arabinose-binding/dimerisation domain AU28_RS04885 IPR009057 Homeodomain-like AU28_RS04885 IPR018060 DNA binding HTH domain, AraC-type AU28_RS04885 IPR018062 HTH domain AraC-type, conserved site AU28_RS04885 IPR020449 Transcription regulator HTH, AraC- type AU28_RS04890 IPR001792 Acylphosphatase-like domain AU28_RS04890 IPR017968 Acylphosphatase, conserved site AU28_RS04890 IPR020456 Acylphosphatase AU28_RS04890 IPR028627 Acylphosphatase, bacteria AU28_RS04895 IPR007453 Sulphur transfer protein DsrC/TusE AU28_RS04895 IPR025526 DsrC-like domain AU28_RS04900 IPR006213 Bax inhibitor 1, conserved site AU28_RS04900 IPR006214 Bax inhibitor 1-related AU28_RS04910 IPR010777 PipA AU28_RS04915 IPR001646 Pentapeptide repeat AU28_RS04930 IPR013095 Type III secretion system chaperone AU28_RS04935 IPR008108 Phosphatase IpgD/SopB AU28_RS04940 IPR025030 Domain of unknown function DUF3950 AU28_RS04950 IPR005322 Peptidase C69, dipeptidase A AU28_RS04955 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS04955 IPR003660 HAMP linker domain AU28_RS04955 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS04955 IPR006290 Heavy metal sensor kinase AU28_RS04960 IPR001789 Signal transduction response regulator, receiver domain AU28_RS04960 IPR001867 Signal transduction response regulator, C-terminal AU28_RS04960 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response AU28_RS04960 IPR011006 CheY-like superfamily AU28_RS04960 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS04960 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS04965 IPR000895 Transthyretin/hydroxyisourate hydrolase AU28_RS04965 IPR014306 Hydroxyisourate hydrolase AU28_RS04965 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily AU28_RS04965 IPR023418 Transthyretin, thyroxine binding site AU28_RS04965 IPR023419 Transthyretin, conserved site AU28_RS04970 IPR002563 Flavin reductase-like, FMN-binding AU28_RS04970 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component AU28_RS04970 IPR012349 FMN-binding split barrel AU28_RS04975 IPR004925 HpaB/PvcC/4-BUDH AU28_RS04975 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AU28_RS04975 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AU28_RS04975 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria AU28_RS04975 IPR024674 HpaB/PvcC/4-BUDH N-terminal AU28_RS04975 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein AU28_RS04975 IPR024719 HpaB/PvcC/4-BUDH C-terminal AU28_RS04980 IPR000835 MarR-type HTH domain AU28_RS04980 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS04980 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR AU28_RS04980 IPR023187 Transcriptional regulator MarR-type, conserved site AU28_RS04985 IPR011234 Fumarylacetoacetase, C-terminal-related AU28_RS04985 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit AU28_RS04985 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit AU28_RS04990 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase AU28_RS04990 IPR015590 Aldehyde dehydrogenase domain AU28_RS04990 IPR016160 Aldehyde dehydrogenase, cysteine active site AU28_RS04990 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS04990 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS04990 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS04990 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AU28_RS04995 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AU28_RS04995 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe AU28_RS05000 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase AU28_RS05000 IPR014347 Tautomerase/MIF superfamily AU28_RS05005 IPR011234 Fumarylacetoacetase, C-terminal-related AU28_RS05005 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase AU28_RS05010 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AU28_RS05010 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase AU28_RS05010 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS05010 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales AU28_RS05015 IPR011701 Major facilitator superfamily AU28_RS05015 IPR012707 4-hydroxyphenylacetate permease AU28_RS05015 IPR020846 Major facilitator superfamily domain AU28_RS05020 IPR009057 Homeodomain-like AU28_RS05020 IPR011051 RmlC-like cupin domain AU28_RS05020 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA AU28_RS05020 IPR013096 Cupin 2, conserved barrel AU28_RS05020 IPR014710 RmlC-like jelly roll fold AU28_RS05020 IPR018060 DNA binding HTH domain, AraC-type AU28_RS05020 IPR018062 HTH domain AraC-type, conserved site AU28_RS05020 IPR020449 Transcription regulator HTH, AraC- type AU28_RS05025 IPR001279 Beta-lactamase-like AU28_RS05030 IPR014448 Anti-adapter protein IraM AU28_RS05035 IPR022835 Chaperone modulatory protein CbpM AU28_RS05040 IPR001623 DnaJ domain AU28_RS05040 IPR002939 Chaperone DnaJ, C-terminal AU28_RS05040 IPR008971 HSP40/DnaJ peptide-binding AU28_RS05040 IPR018253 DnaJ domain, conserved site AU28_RS05040 IPR023859 DNA-binding protein, curved-DNA AU28_RS05050 IPR003834 Cytochrome c assembly protein, transmembrane domain AU28_RS05050 IPR012336 Thioredoxin-like fold AU28_RS05050 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AU28_RS05055 IPR001853 DSBA-like thioredoxin domain AU28_RS05055 IPR012336 Thioredoxin-like fold AU28_RS05055 IPR017937 Thioredoxin, conserved site AU28_RS05060 IPR012336 Thioredoxin-like fold AU28_RS05060 IPR013740 Redoxin AU28_RS05070 IPR025600 YccJ-like protein AU28_RS05075 IPR005025 NADPH-dependent FMN reductase-like AU28_RS05075 IPR010089 Flavoprotein WrbA AU28_RS05075 IPR029039 Flavoprotein-like AU28_RS05080 IPR019626 Stress-induced protein, KGG, repeat AU28_RS05085 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS05085 IPR009057 Homeodomain-like AU28_RS05085 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS05085 IPR013573 Transcription regulator YcdC, C-terminal AU28_RS05085 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS05090 IPR009739 Protein of unknown function DUF1311 AU28_RS05095 IPR002872 Proline dehydrogenase domain AU28_RS05095 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 AU28_RS05095 IPR010985 Ribbon-helix-helix AU28_RS05095 IPR015590 Aldehyde dehydrogenase domain AU28_RS05095 IPR016160 Aldehyde dehydrogenase, cysteine active site AU28_RS05095 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS05095 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS05095 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS05095 IPR024082 Proline dehydrogenase PutA, domain II AU28_RS05095 IPR024089 Proline dehydrogenase PutA, domain I/II AU28_RS05095 IPR024090 Proline dehydrogenase PutA, domain I AU28_RS05095 IPR025703 Bifunctional protein PutA AU28_RS05095 IPR029041 FAD-linked oxidoreductase-like AU28_RS05095 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AU28_RS05100 IPR001734 Sodium/solute symporter AU28_RS05100 IPR011851 Sodium/proline symporter AU28_RS05100 IPR018212 Sodium/solute symporter, conserved site AU28_RS05110 IPR003714 PhoH-like protein AU28_RS05110 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS05115 IPR000281 Helix-turn-helix protein RpiR AU28_RS05115 IPR001347 Sugar isomerase (SIS) AU28_RS05115 IPR009057 Homeodomain-like AU28_RS05115 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS05120 IPR001734 Sodium/solute symporter AU28_RS05125 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase AU28_RS05125 IPR011060 Ribulose-phosphate binding barrel AU28_RS05125 IPR013785 Aldolase-type TIM barrel AU28_RS05130 IPR006652 Kelch repeat type 1 AU28_RS05130 IPR015915 Kelch-type beta propeller AU28_RS05130 IPR019936 Mutatrotase, YjhT-like AU28_RS05135 IPR009331 Oligogalacturonate-specific porin AU28_RS05140 IPR011701 Major facilitator superfamily AU28_RS05140 IPR020846 Major facilitator superfamily domain AU28_RS05145 IPR000683 Oxidoreductase, N-terminal AU28_RS05145 IPR004104 Oxidoreductase, C-terminal AU28_RS05145 IPR016040 NAD(P)-binding domain AU28_RS05150 IPR005545 YCII-related AU28_RS05150 IPR011008 Dimeric alpha-beta barrel AU28_RS05165 IPR009739 Protein of unknown function DUF1311 AU28_RS05180 IPR018392 LysM domain AU28_RS05185 IPR008514 Type VI secretion system effector, Hcp AU28_RS05190 IPR010657 ImpA, N-terminal AU28_RS05190 IPR021069 ImpA, C-terminal AU28_RS05195 IPR009612 ImcF-related AU28_RS05195 IPR010623 Domain of unknown function DUF1215 AU28_RS05195 IPR017731 Type VI secretion system, IcmF AU28_RS05195 IPR025743 ImcF-related, N-terminal domain AU28_RS05200 IPR024079 Metallopeptidase, catalytic domain AU28_RS05200 IPR028208 Effector protein NleD-like AU28_RS05215 IPR006597 Sel1-like AU28_RS05215 IPR011990 Tetratricopeptide-like helical domain AU28_RS05220 IPR006597 Sel1-like AU28_RS05220 IPR011990 Tetratricopeptide-like helical domain AU28_RS05225 IPR002514 Transposase IS3/IS911family AU28_RS05225 IPR009057 Homeodomain-like AU28_RS05250 IPR002059 Cold-shock protein, DNA-binding AU28_RS05250 IPR011129 Cold shock protein AU28_RS05250 IPR012156 Cold shock, CspA AU28_RS05250 IPR012340 Nucleic acid-binding, OB-fold AU28_RS05250 IPR019844 Cold-shock conserved site AU28_RS05255 IPR001702 Porin, Gram-negative type AU28_RS05255 IPR001897 Porin, gammaproteobacterial AU28_RS05255 IPR013793 Porin, Gram-negative type, conserved site AU28_RS05255 IPR023614 Porin domain AU28_RS05265 IPR003607 HD/PDEase domain AU28_RS05265 IPR006674 HD domain AU28_RS05270 IPR001525 C-5 cytosine methyltransferase AU28_RS05270 IPR018117 DNA methylase, C-5 cytosine-specific, active site AU28_RS05270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS05270 IPR031303 AU28_RS05270 AU28_RS05275 IPR004603 DNA mismatch endonuclease vsr AU28_RS05275 IPR011335 Restriction endonuclease type II-like AU28_RS05280 IPR000620 Drug/metabolite transporter AU28_RS05285 IPR008526 Inner membrane protein YedI AU28_RS05290 IPR019226 Protein of unknown function DUF2158 AU28_RS05295 IPR000160 GGDEF domain AU28_RS05295 IPR029787 Nucleotide cyclase AU28_RS05295 IPR033416 AU28_RS05295 AU28_RS05300 IPR000150 Cof protein AU28_RS05300 IPR006379 HAD-superfamily hydrolase, subfamily IIB AU28_RS05300 IPR006381 HAD-superfamily hydrolase, superfamily IIB, YedP AU28_RS05300 IPR012815 Mannosyl-3-phosphoglycerate phosphatase-related AU28_RS05300 IPR023214 HAD-like domain AU28_RS05305 IPR019669 Uncharacterised bacterial stress protein YodD AU28_RS05310 IPR019717 Dextransucrase DSRB AU28_RS05315 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS05315 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS05315 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS05315 IPR030866 AU28_RS05315 AU28_RS05320 IPR002010 Type III secretion system inner membrane R protein AU28_RS05320 IPR006303 Flagellar biosynthesis protein FliR AU28_RS05325 IPR002191 Bacterial export protein family 3 AU28_RS05325 IPR006305 Flagellar biosynthesis protein FliQ AU28_RS05330 IPR005837 Flagellar transport protein FliP AU28_RS05330 IPR005838 Type III secretion system inner membrane P protein AU28_RS05335 IPR022781 Flagellar biosynthesis protein, FliO AU28_RS05340 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb AU28_RS05340 IPR001543 Surface presentation of antigen (SpoA) AU28_RS05340 IPR012826 Flagellar motor switch FliN AU28_RS05340 IPR031576 AU28_RS05340 AU28_RS05345 IPR001543 Surface presentation of antigen (SpoA) AU28_RS05345 IPR001689 Flagellar motor switch protein FliM AU28_RS05345 IPR028976 CheC-like domain AU28_RS05350 IPR005503 Flagellar basal body-associated protein FliL AU28_RS05355 IPR001635 Flagellar hook-length control protein FliK AU28_RS05355 IPR021136 Flagellar hook-length control protein-like, C-terminal AU28_RS05360 IPR012823 Flagellar export FliJ AU28_RS05360 IPR018006 Flagellar FliJ, proteobacteria AU28_RS05365 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AU28_RS05365 IPR003593 AAA+ ATPase domain AU28_RS05365 IPR005714 ATPase, type III secretion system, FliI/YscN AU28_RS05365 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AU28_RS05365 IPR020005 Flagellar export ATPase FliI, clade 1 AU28_RS05365 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS05365 IPR032463 AU28_RS05365 AU28_RS05370 IPR000563 Flagellar assembly protein FliH AU28_RS05370 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AU28_RS05375 IPR000090 Flagellar motor switch protein FliG AU28_RS05375 IPR011002 Flagellar motor switch protein FliG, alpha-helical AU28_RS05375 IPR023087 AU28_RS05375 AU28_RS05375 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AU28_RS05375 IPR032779 AU28_RS05375 AU28_RS05380 IPR000067 Flagellar M-ring protein FliF AU28_RS05380 IPR006182 Secretory protein YscJ/FliF AU28_RS05380 IPR013556 Flagellar M-ring C-terminal AU28_RS05385 IPR001624 Flagellar hook-basal body complex protein FliE AU28_RS05395 IPR001455 TusA-like domain AU28_RS05400 IPR007272 Sulphur transport domain AU28_RS05405 IPR025596 YedD-like protein AU28_RS05410 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AU28_RS05410 IPR006048 Alpha-amylase, C-terminal all beta AU28_RS05410 IPR013776 Alpha-amylase, thermostable AU28_RS05410 IPR013780 Glycosyl hydrolase, family 13, all-beta AU28_RS05410 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS05410 IPR015902 Glycoside hydrolase, family 13 AU28_RS05410 IPR017853 Glycoside hydrolase, superfamily AU28_RS05415 IPR008622 Flagellar protein FliT AU28_RS05420 IPR003713 Flagellar protein FliS AU28_RS05425 IPR003481 Flagellar hook-associated protein 2, N-terminal AU28_RS05425 IPR010809 Flagellar hook-associated 2, C-terminal AU28_RS05425 IPR010810 Flagellin hook, IN motif AU28_RS05435 IPR001029 Flagellin, D0/D1 domain AU28_RS05435 IPR001492 Flagellin AU28_RS05440 IPR020193 Flagellin lysine-N-methylase, C-terminal AU28_RS05445 IPR000943 RNA polymerase sigma-70 AU28_RS05445 IPR007624 RNA polymerase sigma-70 region 3 AU28_RS05445 IPR007627 RNA polymerase sigma-70 region 2 AU28_RS05445 IPR007630 RNA polymerase sigma-70 region 4 AU28_RS05445 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS05445 IPR012845 RNA polymerase sigma factor, FliA/WhiG AU28_RS05445 IPR013324 RNA polymerase sigma factor, region 3/4 AU28_RS05445 IPR013325 RNA polymerase sigma factor, region 2 AU28_RS05445 IPR014284 RNA polymerase sigma-70 like domain AU28_RS05445 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE AU28_RS05445 IPR028617 RNA polymerase sigma factor FliA AU28_RS05450 IPR004107 Integrase, SAM-like, N-terminal AU28_RS05450 IPR022523 Flagellar regulator, FliZ AU28_RS05455 IPR001320 Ionotropic glutamate receptor AU28_RS05455 IPR001638 Extracellular solute-binding protein, family 3 AU28_RS05455 IPR018313 Extracellular solute-binding protein, family 3, conserved site AU28_RS05460 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS05460 IPR005966 D-cysteine desulfhydrase AU28_RS05460 IPR023702 D-cysteine desulphhydrase, bacterial AU28_RS05460 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AU28_RS05465 IPR000515 MetI-like domain AU28_RS05465 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AU28_RS05470 IPR003439 ABC transporter-like AU28_RS05470 IPR003593 AAA+ ATPase domain AU28_RS05470 IPR017871 ABC transporter, conserved site AU28_RS05470 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS05470 IPR030679 AU28_RS05470 AU28_RS05475 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS05475 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AU28_RS05475 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS05475 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS05480 IPR019705 Protein of unknown function DUF2594 AU28_RS05490 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS05490 IPR001789 Signal transduction response regulator, receiver domain AU28_RS05490 IPR011006 CheY-like superfamily AU28_RS05490 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS05490 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS05495 IPR000305 GIY-YIG nuclease superfamily AU28_RS05495 IPR001162 UvrC family homology region AU28_RS05495 IPR001943 UVR domain AU28_RS05495 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AU28_RS05495 IPR004791 UvrABC system, subunit C AU28_RS05495 IPR010994 RuvA domain 2-like AU28_RS05495 IPR027299 GIY-YIG domain AU28_RS05500 IPR000462 CDP-alcohol phosphatidyltransferase AU28_RS05500 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase AU28_RS05500 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial AU28_RS05525 IPR000064 Endopeptidase, NLPC/P60 domain AU28_RS05525 IPR025606 NLPC/P60, N-terminal domain AU28_RS05525 IPR026864 SH3b2-type SH3 domain AU28_RS05525 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type AU28_RS05535 IPR004027 SEC-C motif AU28_RS05535 IPR011978 Uncharacterised protein family UPF0149 AU28_RS05535 IPR032710 AU28_RS05535 AU28_RS05540 IPR002091 Aromatic amino acid permease AU28_RS05540 IPR013059 Tryptophan/tyrosine transporter AU28_RS05540 IPR013061 Tryptophan/tryrosine permease, conserved site AU28_RS05540 IPR018227 Tryptophan/tyrosine permease AU28_RS05545 IPR019620 Putative metal-binding protein AU28_RS05550 IPR001519 Ferritin AU28_RS05550 IPR008331 Ferritin/DPS protein domain AU28_RS05550 IPR009078 Ferritin-like superfamily AU28_RS05550 IPR012347 Ferritin-related AU28_RS05555 IPR025731 YecR-like lipoprotein AU28_RS05560 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family AU28_RS05560 IPR022133 Ribose-5-phosphate isomerase, C-terminal AU28_RS05565 IPR001519 Ferritin AU28_RS05565 IPR008331 Ferritin/DPS protein domain AU28_RS05565 IPR009078 Ferritin-like superfamily AU28_RS05565 IPR012347 Ferritin-related AU28_RS05570 IPR002818 ThiJ/PfpI AU28_RS05570 IPR029062 Class I glutamine amidotransferase-like AU28_RS05580 IPR003337 Trehalose-phosphatase AU28_RS05580 IPR006379 HAD-superfamily hydrolase, subfamily IIB AU28_RS05580 IPR023214 HAD-like domain AU28_RS05585 IPR001830 Glycosyl transferase, family 20 AU28_RS05585 IPR012766 Alpha,alpha-trehalose-phosphate synthase AU28_RS05590 IPR006015 Universal stress protein A AU28_RS05590 IPR006016 UspA AU28_RS05590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS05600 IPR023559 Flagellar transcriptional activator FlhD AU28_RS05605 IPR007944 Flagellar transcriptional activator FlhC AU28_RS05610 IPR000540 Flagellar motor protein MotA, conserved site AU28_RS05610 IPR002898 MotA/TolQ/ExbB proton channel AU28_RS05610 IPR022522 Flagellar motor stator, MotA AU28_RS05615 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AU28_RS05615 IPR025713 Motility protein B, N-terminal domain AU28_RS05620 IPR002545 CheW-like protein AU28_RS05620 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS05620 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS05620 IPR004105 Histidine kinase CheA-like, homodimeric domain AU28_RS05620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS05620 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AU28_RS05620 IPR015162 CheY binding AU28_RS05625 IPR002545 CheW-like protein AU28_RS05630 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding AU28_RS05630 IPR003660 HAMP linker domain AU28_RS05630 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AU28_RS05630 IPR004090 Chemotaxis methyl-accepting receptor AU28_RS05630 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AU28_RS05635 IPR000780 MCP methyltransferase, CheR-type AU28_RS05635 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal AU28_RS05635 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AU28_RS05635 IPR026024 Chemotaxis protein methyltransferase CheR AU28_RS05635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS05640 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AU28_RS05640 IPR001789 Signal transduction response regulator, receiver domain AU28_RS05640 IPR008248 Signal transduction response regulator, chemotaxis, CheB AU28_RS05640 IPR011006 CheY-like superfamily AU28_RS05645 IPR001789 Signal transduction response regulator, receiver domain AU28_RS05645 IPR011006 CheY-like superfamily AU28_RS05650 IPR007439 Chemotaxis phosphatase, CheZ AU28_RS05655 IPR006135 Type III secretion system substrate exporter AU28_RS05655 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB AU28_RS05655 IPR029025 Type III secretion system substrate exporter, C-terminal AU28_RS05660 IPR001712 Type III secretion system FHIPEP AU28_RS05660 IPR006301 Flagellar biosynthesis protein FlhA AU28_RS05660 IPR025505 FHIPEP conserved site AU28_RS05665 IPR009420 Flagellar FlhE AU28_RS05670 IPR008928 Six-hairpin glycosidase-like AU28_RS05670 IPR010905 Glycosyl hydrolase, family 88 AU28_RS05670 IPR012341 Six-hairpin glycosidase AU28_RS05675 IPR001460 Penicillin-binding protein, transpeptidase AU28_RS05675 IPR005311 Penicillin-binding protein, dimerisation domain AU28_RS05675 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS05675 IPR017790 Penicillin-binding protein 2 AU28_RS05680 IPR001278 Arginine-tRNA ligase AU28_RS05680 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AU28_RS05680 IPR005148 Arginyl tRNA synthetase N-terminal domain AU28_RS05680 IPR008909 DALR anticodon binding AU28_RS05680 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AU28_RS05680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS05685 IPR010393 Protein of unknown function DUF991 AU28_RS05685 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AU28_RS05690 IPR005627 Copper homeostasis protein CutC AU28_RS05690 IPR023648 Copper homeostasis CutC domain AU28_RS05695 IPR010017 tRNA (mo5U34)-methyltransferase AU28_RS05695 IPR027555 tRNA (mo5U34)-methyltransferase-like AU28_RS05695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS05700 IPR005271 tRNA (cmo5U34)-methyltransferase AU28_RS05700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS05705 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AU28_RS05705 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AU28_RS05710 IPR002763 Protein of unknown function DUF72 AU28_RS05715 IPR000868 Isochorismatase-like AU28_RS05720 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AU28_RS05720 IPR004115 GAD-like domain AU28_RS05720 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AU28_RS05720 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AU28_RS05720 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type AU28_RS05720 IPR012340 Nucleic acid-binding, OB-fold AU28_RS05720 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like AU28_RS05720 IPR029351 GAD domain AU28_RS05725 IPR000086 NUDIX hydrolase domain AU28_RS05725 IPR003564 dATP pyrophosphohydrolase AU28_RS05725 IPR015797 NUDIX hydrolase domain-like AU28_RS05725 IPR020084 NUDIX hydrolase, conserved site AU28_RS05730 IPR002876 Transcriptional regulator TACO1-like AU28_RS05730 IPR017856 Integrase, N-terminal zinc-binding domain-like AU28_RS05730 IPR026563 Transcriptional regulator TACO1-like, domain 2 AU28_RS05730 IPR026564 Transcriptional regulator TACO1-like, domain 3 AU28_RS05730 IPR029072 YebC-like AU28_RS05735 IPR002176 Crossover junction endodeoxyribonuclease RuvC AU28_RS05735 IPR012337 Ribonuclease H-like domain AU28_RS05735 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site AU28_RS05740 IPR024453 AU28_RS05740 AU28_RS05750 IPR000085 Bacterial DNA recombination protein RuvA AU28_RS05750 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AU28_RS05750 IPR010994 RuvA domain 2-like AU28_RS05750 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal AU28_RS05750 IPR012340 Nucleic acid-binding, OB-fold AU28_RS05750 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial AU28_RS05755 IPR003593 AAA+ ATPase domain AU28_RS05755 IPR004605 DNA helicase, Holliday junction RuvB type AU28_RS05755 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal AU28_RS05755 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal AU28_RS05755 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS05755 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS05760 IPR001626 ABC-3 AU28_RS05760 IPR029022 ABC transporter, BtuC-like AU28_RS05765 IPR003439 ABC transporter-like AU28_RS05765 IPR003593 AAA+ ATPase domain AU28_RS05765 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS05770 IPR006127 Periplasmic solute binding protein family AU28_RS05775 IPR007340 Opacity-associated protein A AU28_RS05775 IPR011055 Duplicated hybrid motif AU28_RS05775 IPR013731 Opacity-associated protein A, N-terminal AU28_RS05775 IPR016047 Peptidase M23 AU28_RS05775 IPR018392 LysM domain AU28_RS05780 IPR004960 Bacterial lipid A biosynthesis acyltransferase AU28_RS05780 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase AU28_RS05785 IPR001697 Pyruvate kinase AU28_RS05785 IPR011037 Pyruvate kinase-like, insert domain AU28_RS05785 IPR015793 Pyruvate kinase, barrel AU28_RS05785 IPR015794 Pyruvate kinase, alpha/beta AU28_RS05785 IPR015795 Pyruvate kinase, C-terminal AU28_RS05785 IPR015806 Pyruvate kinase, beta-barrel insert domain AU28_RS05785 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS05785 IPR018209 Pyruvate kinase, active site AU28_RS05790 IPR000281 Helix-turn-helix protein RpiR AU28_RS05790 IPR001347 Sugar isomerase (SIS) AU28_RS05790 IPR009057 Homeodomain-like AU28_RS05790 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS05795 IPR001282 Glucose-6-phosphate dehydrogenase AU28_RS05795 IPR016040 NAD(P)-binding domain AU28_RS05795 IPR019796 Glucose-6-phosphate dehydrogenase, active site AU28_RS05795 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding AU28_RS05795 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal AU28_RS05800 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AU28_RS05800 IPR004786 6-phosphogluconate dehydratase AU28_RS05800 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AU28_RS05800 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AU28_RS05805 IPR000887 KDPG/KHG aldolase AU28_RS05805 IPR013785 Aldolase-type TIM barrel AU28_RS05805 IPR031337 AU28_RS05805 AU28_RS05805 IPR031338 AU28_RS05805 AU28_RS05810 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AU28_RS05810 IPR005862 Phosphoribosylglycinamide formyltransferase 2 AU28_RS05810 IPR011054 Rudiment single hybrid motif AU28_RS05810 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS05810 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS05810 IPR016185 Pre-ATP-grasp domain AU28_RS05815 IPR009813 Uncharacterised protein family YebG AU28_RS05820 IPR020236 Uncharacterised protein family YebF AU28_RS05820 IPR025603 YebF/Colicin-M immunity protein AU28_RS05825 IPR007486 Protein of unknown function DUF533 AU28_RS05825 IPR029024 TerB-like AU28_RS05830 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AU28_RS05830 IPR002470 Peptidase S9A, prolyl oligopeptidase AU28_RS05830 IPR002471 Peptidase S9, serine active site AU28_RS05830 IPR023302 Peptidase S9A, N-terminal domain AU28_RS05830 IPR029058 Alpha/Beta hydrolase fold AU28_RS05835 IPR012337 Ribonuclease H-like domain AU28_RS05835 IPR013520 Exonuclease, RNase T/DNA polymerase III AU28_RS05840 IPR003010 Carbon-nitrogen hydrolase AU28_RS05845 IPR009052 DNA polymerase III-theta, bacterial AU28_RS05845 IPR011325 DNA polymerase III-theta, core, bacterial AU28_RS05850 IPR007348 CopC domain AU28_RS05850 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like AU28_RS05850 IPR014756 Immunoglobulin E-set AU28_RS05855 IPR008457 Copper resistance D AU28_RS05860 IPR019648 Protein of unknown function DUF2511 AU28_RS05870 IPR002104 Integrase, catalytic AU28_RS05870 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS05870 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain AU28_RS05870 IPR013762 Integrase-like, catalytic core AU28_RS05870 IPR015094 Integrase, lambda-type, N-terminal DNA-binding AU28_RS05870 IPR016177 DNA-binding domain AU28_RS05870 IPR023109 Integrase/recombinase, N-terminal AU28_RS05875 IPR009061 DNA binding domain, putative AU28_RS05875 IPR012884 Excisionase-like AU28_RS05880 IPR001279 Beta-lactamase-like AU28_RS05880 IPR003033 SCP2 sterol-binding domain AU28_RS05880 IPR029228 Alkyl sulfatase dimerisation domain AU28_RS05880 IPR029229 Alkyl sulfatase, C-terminal AU28_RS05895 IPR009797 Protein of unknown function DUF1367 AU28_RS05900 IPR008713 Bacteriophage lambda NinG AU28_RS05905 IPR010455 Bacteriophage 82, GpQ AU28_RS05925 IPR010777 PipA AU28_RS05930 IPR006481 Bacteriophage lambda, GpS, holin AU28_RS05935 IPR002196 Glycoside hydrolase, family 24 AU28_RS05935 IPR023346 Lysozyme-like domain AU28_RS05935 IPR023347 Lysozyme domain AU28_RS05940 IPR004929 Bacteriophage Rz lysis protein AU28_RS05945 IPR009901 Bacteriophage VT1-Sakai, H0025 AU28_RS05950 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS05950 IPR027385 Outer membrane protein beta-barrel AU28_RS05955 IPR001424 Superoxide dismutase, copper/zinc binding domain AU28_RS05955 IPR018152 Superoxide dismutase, copper/zinc, binding site AU28_RS05955 IPR024134 AU28_RS05955 AU28_RS05960 IPR006487 Bacteriophage lambda, GpL, minor tail AU28_RS05965 IPR028090 JAB domain, prokaryotic AU28_RS05975 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AU28_RS05980 IPR005414 Guanine nucleotide exchange factor SopE family AU28_RS05980 IPR016018 Guanine nucleotide exchange factor SopE, N-terminal domain AU28_RS05980 IPR016019 Guanine nucleotide exchange factor SopE, GEF domain AU28_RS05995 IPR002104 Integrase, catalytic AU28_RS05995 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS05995 IPR013762 Integrase-like, catalytic core AU28_RS06000 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS06000 IPR013762 Integrase-like, catalytic core AU28_RS06000 IPR023109 Integrase/recombinase, N-terminal AU28_RS06010 IPR023346 Lysozyme-like domain AU28_RS06015 IPR019659 Protein of unknown function DUF2514 AU28_RS06030 IPR009901 Bacteriophage VT1-Sakai, H0025 AU28_RS06040 IPR008866 Bacteriophage lambda, GpA AU28_RS06050 IPR002589 Macro domain AU28_RS06055 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AU28_RS06060 IPR029335 Phage-encoded virulence factor AU28_RS06070 IPR003752 Disulphide bond formation protein DsbB/BdbC AU28_RS06070 IPR023380 Disulphide bond formation protein DsbB-like domain AU28_RS06080 IPR000620 Drug/metabolite transporter AU28_RS06095 IPR001207 Transposase, mutator type AU28_RS06110 IPR000182 GNAT domain AU28_RS06110 IPR016181 Acyl-CoA N-acyltransferase AU28_RS06120 IPR009833 Uncharacterised protein YdfO-like AU28_RS06125 IPR005414 Guanine nucleotide exchange factor SopE family AU28_RS06125 IPR016018 Guanine nucleotide exchange factor SopE, N-terminal domain AU28_RS06125 IPR016019 Guanine nucleotide exchange factor SopE, GEF domain AU28_RS06135 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AU28_RS06135 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase AU28_RS06135 IPR029052 Metallo-dependent phosphatase-like AU28_RS06140 IPR009954 Protein of unknown function DUF1482 AU28_RS06145 IPR009950 Protein of unknown function DUF1480 AU28_RS06150 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p AU28_RS06150 IPR011023 Nop2p AU28_RS06150 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AU28_RS06150 IPR023267 RNA (C5-cytosine) methyltransferase AU28_RS06150 IPR023545 rRNA small subunit methyltransferase F AU28_RS06150 IPR027391 rRNA small subunit methyltransferase F, C-terminal domain AU28_RS06150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS06150 IPR031341 AU28_RS06150 AU28_RS06155 IPR003399 Mammalian cell entry-related AU28_RS06160 IPR005219 Conserved hypothetical protein CHP00155 AU28_RS06160 IPR007498 Paraquat-inducible protein A AU28_RS06165 IPR003018 GAF domain AU28_RS06165 IPR029016 GAF domain-like AU28_RS06170 IPR016103 ProQ/FinO domain AU28_RS06170 IPR023529 Transporter ProP effector, ProQ AU28_RS06175 IPR001478 PDZ domain AU28_RS06175 IPR004447 C-terminal-processing peptidase S41A AU28_RS06175 IPR005151 Tail specific protease AU28_RS06175 IPR020992 Tail specific protease, C-terminal AU28_RS06175 IPR029045 ClpP/crotonase-like domain AU28_RS06180 IPR001915 Peptidase M48 AU28_RS06180 IPR022919 Peptidase M48, protease HtpX, putative AU28_RS06185 IPR011701 Major facilitator superfamily AU28_RS06185 IPR020846 Major facilitator superfamily domain AU28_RS06190 IPR005471 Transcription regulator IclR, N-terminal AU28_RS06190 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS06190 IPR014757 Transcription regulator IclR, C-terminal AU28_RS06190 IPR029016 GAF domain-like AU28_RS06195 IPR025611 YobH-like protein AU28_RS06200 IPR020907 PhoP/PhoQ regulator MgrB AU28_RS06205 IPR025594 YebO-like protein AU28_RS06210 IPR019672 Protein of unknown function DUF2627 AU28_RS06215 IPR002059 Cold-shock protein, DNA-binding AU28_RS06215 IPR011129 Cold shock protein AU28_RS06215 IPR012156 Cold shock, CspA AU28_RS06215 IPR012340 Nucleic acid-binding, OB-fold AU28_RS06215 IPR019844 Cold-shock conserved site AU28_RS06220 IPR001460 Penicillin-binding protein, transpeptidase AU28_RS06220 IPR005311 Penicillin-binding protein, dimerisation domain AU28_RS06220 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS06225 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted AU28_RS06225 IPR025714 Methyltransferase domain AU28_RS06225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS06230 IPR003810 Domain of unknown function DUF204 AU28_RS06230 IPR022929 Putative manganese efflux pump MntP AU28_RS06235 IPR009328 Protein of unknown function DUF986 AU28_RS06240 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component AU28_RS06240 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup AU28_RS06245 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit AU28_RS06250 IPR004701 Phosphotransferase system, mannose-type IIA component AU28_RS06250 IPR004720 Phosphotransferase system, sorbose subfamily IIB component AU28_RS06250 IPR013789 Phosphotransferase system, mannose family IIA component AU28_RS06250 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup AU28_RS06260 IPR005170 Transporter-associated domain AU28_RS06260 IPR005496 Integral membrane protein TerC AU28_RS06260 IPR016166 FAD-binding, type 2 AU28_RS06260 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AU28_RS06265 IPR001633 EAL domain AU28_RS06265 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AU28_RS06270 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AU28_RS06270 IPR005130 Serine dehydratase-like, alpha subunit AU28_RS06270 IPR005131 Serine dehydratase beta chain AU28_RS06270 IPR029009 Allosteric substrate binding domain AU28_RS06275 IPR000059 NUDIX hydrolase, NudL, conserved site AU28_RS06275 IPR000086 NUDIX hydrolase domain AU28_RS06275 IPR015797 NUDIX hydrolase domain-like AU28_RS06280 IPR005801 ADC synthase AU28_RS06280 IPR005802 Para-aminobenzoate synthase, component I AU28_RS06280 IPR006805 Anthranilate synthase component I, N-terminal AU28_RS06280 IPR015890 Chorismate binding, C-terminal AU28_RS06280 IPR019999 Anthranilate synthase component I - like AU28_RS06285 IPR005371 Uncharacterised protein family UPF0181 AU28_RS06290 IPR006175 YjgF/Yer057p/UK114 family AU28_RS06290 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AU28_RS06290 IPR019897 YjgF-like protein, conserved site AU28_RS06295 IPR006555 ATP-dependent helicase, C-terminal AU28_RS06295 IPR006935 Helicase/UvrB domain AU28_RS06295 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS06295 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06300 IPR000905 Gcp-like domain AU28_RS06300 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ AU28_RS06305 IPR004658 Outer membrane lipoprotein Slp AU28_RS06310 IPR000873 AMP-dependent synthetase/ligase AU28_RS06310 IPR020845 AMP-binding, conserved site AU28_RS06310 IPR025110 AMP-binding enzyme C-terminal domain AU28_RS06315 IPR002121 HRDC domain AU28_RS06315 IPR002562 3'-5' exonuclease domain AU28_RS06315 IPR006292 Ribonuclease D AU28_RS06315 IPR010997 HRDC-like AU28_RS06315 IPR012337 Ribonuclease H-like domain AU28_RS06320 IPR005527 Septum formation topological specificity factor MinE AU28_RS06325 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AU28_RS06325 IPR010223 ATP binding protein MinD, bacterial-type AU28_RS06325 IPR025501 ATP binding protein MinD AU28_RS06325 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06330 IPR005526 Septum formation inhibitor MinC, C-terminal AU28_RS06330 IPR007874 Septum formation inhibitor MinC, N-terminal AU28_RS06330 IPR013033 Septum formation inhibitor MinC AU28_RS06330 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal AU28_RS06335 IPR027354 YcgL domain AU28_RS06340 IPR011234 Fumarylacetoacetase, C-terminal-related AU28_RS06345 IPR005358 Putative zinc- or iron-chelating domain containing protein AU28_RS06345 IPR008228 Uncharacterised conserved protein UCP006173 AU28_RS06355 IPR012563 Gns AU28_RS06360 IPR014510 Tellurite resistance predicted, YeaR AU28_RS06360 IPR014710 RmlC-like jelly roll fold AU28_RS06360 IPR015392 Domain of unknown function DUF1971 AU28_RS06365 IPR003752 Disulphide bond formation protein DsbB/BdbC AU28_RS06365 IPR022920 Disulphide bond formation protein DsbB AU28_RS06365 IPR023380 Disulphide bond formation protein DsbB-like domain AU28_RS06370 IPR004671 Na+/H+ antiporter NhaB AU28_RS06375 IPR000524 Transcription regulator HTH, GntR AU28_RS06375 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS06375 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS06375 IPR014178 Fatty acid response transcription factor FadR AU28_RS06375 IPR028374 FadR, C-terminal domain AU28_RS06380 IPR007390 Sporulation stage V, protein R AU28_RS06385 IPR006076 FAD dependent oxidoreductase AU28_RS06385 IPR023080 D-amino acid dehydrogenase small subunit, DadA AU28_RS06385 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS06390 IPR000821 Alanine racemase AU28_RS06390 IPR001608 Alanine racemase, N-terminal AU28_RS06390 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AU28_RS06390 IPR011079 Alanine racemase, C-terminal AU28_RS06390 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site AU28_RS06390 IPR029066 PLP-binding barrel AU28_RS06395 IPR005170 Transporter-associated domain AU28_RS06395 IPR006037 Regulator of K+ conductance, C-terminal AU28_RS06395 IPR006153 Cation/H+ exchanger AU28_RS06395 IPR016166 FAD-binding, type 2 AU28_RS06395 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AU28_RS06395 IPR023729 K(+)/H(+) antiporter NhaP2 AU28_RS06395 IPR030151 AU28_RS06395 AU28_RS06400 IPR003507 Muramoyl-tetrapeptide carboxypeptidase AU28_RS06400 IPR027461 LD-carboxypeptidase A, C-terminal domain AU28_RS06400 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AU28_RS06400 IPR029062 Class I glutamine amidotransferase-like AU28_RS06405 IPR000189 Prokaryotic transglycosylase, active site AU28_RS06405 IPR008258 Lytic transglycosylase-like SLT domain AU28_RS06405 IPR023346 Lysozyme-like domain AU28_RS06405 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A AU28_RS06410 IPR009875 PilZ domain AU28_RS06410 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AU28_RS06410 IPR012349 FMN-binding split barrel AU28_RS06410 IPR023787 Type III secretion system flagellar brake protein YcgR AU28_RS06415 IPR007341 Transglycosylase-associated protein AU28_RS06420 IPR001661 Glycoside hydrolase, family 37 AU28_RS06420 IPR008928 Six-hairpin glycosidase-like AU28_RS06420 IPR018232 Glycoside hydrolase, family 37, conserved site AU28_RS06420 IPR023720 Trehalase, periplasmic AU28_RS06425 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AU28_RS06425 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AU28_RS06425 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AU28_RS06425 IPR014362 Glutamate dehydrogenase AU28_RS06425 IPR016040 NAD(P)-binding domain AU28_RS06430 IPR012994 Membrane bound YbgT-like AU28_RS06435 IPR003317 Cytochrome d ubiquinol oxidase, subunit II AU28_RS06440 IPR002585 Cytochrome d ubiquinol oxidase, subunit I AU28_RS06445 IPR006894 HupH hydrogenase expression protein, C-terminal AU28_RS06450 IPR010893 [NiFe]-hydrogenase maturation factor HyaE AU28_RS06450 IPR012336 Thioredoxin-like fold AU28_RS06455 IPR000671 Peptidase A31 family AU28_RS06455 IPR004419 Peptidase A31, hydrogenase expression/formation protein AU28_RS06455 IPR023430 Peptidase HybD-like domain AU28_RS06460 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit AU28_RS06460 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AU28_RS06460 IPR016174 Di-haem cytochrome, transmembrane AU28_RS06465 IPR001501 Nickel-dependent hydrogenase, large subunit AU28_RS06465 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site AU28_RS06465 IPR029014 NiFe hydrogenase-like AU28_RS06470 IPR001821 [NiFe]-hydrogenase, small subunit AU28_RS06470 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AU28_RS06470 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AU28_RS06470 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AU28_RS06485 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 AU28_RS06485 IPR006073 GTP binding domain AU28_RS06485 IPR012675 Beta-grasp domain AU28_RS06485 IPR012676 TGS-like AU28_RS06485 IPR013029 Domain of unknown function DUF933 AU28_RS06485 IPR023192 TGS-like domain AU28_RS06485 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06490 IPR001328 Peptidyl-tRNA hydrolase AU28_RS06490 IPR018171 Peptidyl-tRNA hydrolase, conserved site AU28_RS06495 IPR019698 Protein of unknown function DUF2583 AU28_RS06500 IPR001902 Sulphate anion transporter AU28_RS06500 IPR002645 STAS domain AU28_RS06500 IPR011547 Sulphate transporter AU28_RS06500 IPR018045 Sulphate anion transporter, conserved site AU28_RS06505 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site AU28_RS06505 IPR005946 Ribose-phosphate diphosphokinase AU28_RS06505 IPR029057 Phosphoribosyltransferase-like AU28_RS06505 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AU28_RS06510 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase AU28_RS06510 IPR006204 GHMP kinase N-terminal domain AU28_RS06510 IPR013750 GHMP kinase, C-terminal domain AU28_RS06510 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS06510 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS06515 IPR004565 Outer membrane lipoprotein LolB AU28_RS06515 IPR029046 Lipoprotein localisation LolA/LolB/LppX AU28_RS06520 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase AU28_RS06520 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AU28_RS06520 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal AU28_RS06520 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain AU28_RS06520 IPR016040 NAD(P)-binding domain AU28_RS06520 IPR018214 Glutamyl-tRNA reductase, conserved site AU28_RS06525 IPR000352 Peptide chain release factor class I/class II AU28_RS06525 IPR004373 Peptide chain release factor 1 AU28_RS06525 IPR005139 Peptide chain release factor AU28_RS06525 IPR014720 Double-stranded RNA-binding domain AU28_RS06530 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS06530 IPR004556 Modification methylase HemK AU28_RS06530 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AU28_RS06530 IPR025714 Methyltransferase domain AU28_RS06530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS06535 IPR007360 Invasion gene expression up-regulator, SirB AU28_RS06540 IPR011990 Tetratricopeptide-like helical domain AU28_RS06540 IPR032698 AU28_RS06540 AU28_RS06545 IPR006218 DAHP synthetase I/KDSA AU28_RS06545 IPR006269 3-deoxy-8-phosphooctulonate synthase AU28_RS06545 IPR013785 Aldolase-type TIM barrel AU28_RS06550 IPR004713 Calcium/proton exchanger AU28_RS06550 IPR004837 Sodium/calcium exchanger membrane region AU28_RS06555 IPR009317 ChaB AU28_RS06560 IPR003787 Sulphur relay, DsrE/F-like protein AU28_RS06560 IPR027396 DsrEFH-like AU28_RS06565 IPR024519 Domain of unknown function DUF3442, intimin/invasin AU28_RS06570 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS06570 IPR001789 Signal transduction response regulator, receiver domain AU28_RS06570 IPR011006 CheY-like superfamily AU28_RS06570 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS06570 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS06575 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS06575 IPR003660 HAMP linker domain AU28_RS06575 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AU28_RS06575 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing AU28_RS06575 IPR029095 NarX-like, N-terminal AU28_RS06580 IPR004737 Nitrate transporter AU28_RS06580 IPR011701 Major facilitator superfamily AU28_RS06580 IPR020846 Major facilitator superfamily domain AU28_RS06585 IPR006468 Nitrate reductase, alpha subunit AU28_RS06585 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS06585 IPR006656 Molybdopterin oxidoreductase AU28_RS06585 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS06585 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS06585 IPR009010 Aspartate decarboxylase-like domain AU28_RS06585 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AU28_RS06585 IPR028189 Nitrate reductase, alpha subunit, N-terminal AU28_RS06590 IPR006547 Nitrate reductase, beta subunit AU28_RS06590 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS06590 IPR029263 Respiratory nitrate reductase beta, C-terminal AU28_RS06595 IPR003765 Nitrate reductase chaperone, NarJ AU28_RS06595 IPR020945 DMSO/Nitrate reductase chaperone AU28_RS06600 IPR003816 Nitrate reductase, gamma subunit AU28_RS06600 IPR023234 NarG-like domain AU28_RS06605 IPR006597 Sel1-like AU28_RS06605 IPR011990 Tetratricopeptide-like helical domain AU28_RS06630 IPR004027 SEC-C motif AU28_RS06630 IPR023006 Uncharacterised protein family UPF0225 AU28_RS06630 IPR032710 AU28_RS06630 AU28_RS06635 IPR001423 Lysophospholipase patatin, conserved site AU28_RS06635 IPR002641 Patatin/Phospholipase A2-related AU28_RS06635 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AU28_RS06640 IPR001789 Signal transduction response regulator, receiver domain AU28_RS06640 IPR011006 CheY-like superfamily AU28_RS06640 IPR028616 Regulator of RpoS AU28_RS06645 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type AU28_RS06645 IPR005835 Nucleotidyl transferase AU28_RS06645 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS06650 IPR001801 Histone-like protein H-NS AU28_RS06650 IPR027444 Histone-like protein H-NS, C-terminal domain AU28_RS06650 IPR027454 Histone-like protein H-NS family, oligomerisation domain AU28_RS06655 IPR001267 Thymidine kinase AU28_RS06655 IPR020633 Thymidine kinase, conserved site AU28_RS06655 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06660 IPR001670 Alcohol dehydrogenase, iron-type AU28_RS06660 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase AU28_RS06660 IPR015590 Aldehyde dehydrogenase domain AU28_RS06660 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS06660 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS06660 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS06660 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AU28_RS06665 IPR002771 Multiple antibiotic resistance (MarC)-related AU28_RS06670 IPR000914 Bacterial extracellular solute-binding protein, family 5 AU28_RS06670 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site AU28_RS06670 IPR030678 AU28_RS06670 AU28_RS06675 IPR000515 MetI-like domain AU28_RS06680 IPR000515 MetI-like domain AU28_RS06680 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AU28_RS06685 IPR003439 ABC transporter-like AU28_RS06685 IPR003593 AAA+ ATPase domain AU28_RS06685 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AU28_RS06685 IPR017871 ABC transporter, conserved site AU28_RS06685 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06690 IPR003439 ABC transporter-like AU28_RS06690 IPR003593 AAA+ ATPase domain AU28_RS06690 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AU28_RS06690 IPR017871 ABC transporter, conserved site AU28_RS06690 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06695 IPR005821 Ion transport domain AU28_RS06695 IPR027359 Voltage-dependent channel, four helix bundle domain AU28_RS06695 IPR028325 Voltage-gated potassium channel AU28_RS06700 IPR007376 dsDNA mimic, putative AU28_RS06705 IPR001736 Phospholipase D/Transphosphatidylase AU28_RS06705 IPR022924 Cardiolipin synthase AU28_RS06705 IPR025202 Phospholipase D-like domain AU28_RS06705 IPR027379 Cardiolipin synthase N-terminal AU28_RS06705 IPR030840 AU28_RS06705 AU28_RS06710 IPR005545 YCII-related AU28_RS06710 IPR011008 Dimeric alpha-beta barrel AU28_RS06715 IPR003538 Gram-negative bacterial TonB protein AU28_RS06715 IPR006260 TonB, C-terminal AU28_RS06720 IPR006683 Thioesterase superfamily AU28_RS06720 IPR029069 HotDog domain AU28_RS06725 IPR006008 Intracellular septation protein A AU28_RS06730 IPR009627 Uncharacterised protein family UPF0259 AU28_RS06735 IPR005358 Putative zinc- or iron-chelating domain containing protein AU28_RS06740 IPR005618 Outer membrane protein, OmpW AU28_RS06740 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS06745 IPR007760 Manganese catalase AU28_RS06745 IPR009078 Ferritin-like superfamily AU28_RS06745 IPR012347 Ferritin-related AU28_RS06750 IPR009078 Ferritin-like superfamily AU28_RS06750 IPR010287 Domain of unknown function DUF892 AU28_RS06750 IPR012347 Ferritin-related AU28_RS06755 IPR009078 Ferritin-like superfamily AU28_RS06755 IPR010287 Domain of unknown function DUF892 AU28_RS06755 IPR012347 Ferritin-related AU28_RS06760 IPR019626 Stress-induced protein, KGG, repeat AU28_RS06765 IPR002028 Tryptophan synthase, alpha chain AU28_RS06765 IPR011060 Ribulose-phosphate binding barrel AU28_RS06765 IPR013785 Aldolase-type TIM barrel AU28_RS06765 IPR018204 Tryptophan synthase, alpha chain, active site AU28_RS06770 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS06770 IPR006653 Tryptophan synthase, beta chain, conserved site AU28_RS06770 IPR006654 Tryptophan synthase, beta chain AU28_RS06770 IPR023026 Tryptophan synthase beta chain/beta chain-like AU28_RS06775 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain AU28_RS06775 IPR001468 Indole-3-glycerol phosphate synthase, conserved site AU28_RS06775 IPR011060 Ribulose-phosphate binding barrel AU28_RS06775 IPR013785 Aldolase-type TIM barrel AU28_RS06775 IPR013798 Indole-3-glycerol phosphate synthase AU28_RS06780 IPR000312 Glycosyl transferase, family 3 AU28_RS06780 IPR005940 Anthranilate phosphoribosyl transferase AU28_RS06780 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AU28_RS06780 IPR017459 Glycosyl transferase family 3, N-terminal domain AU28_RS06780 IPR017926 Glutamine amidotransferase AU28_RS06780 IPR029062 Class I glutamine amidotransferase-like AU28_RS06785 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial AU28_RS06785 IPR005801 ADC synthase AU28_RS06785 IPR006805 Anthranilate synthase component I, N-terminal AU28_RS06785 IPR015890 Chorismate binding, C-terminal AU28_RS06785 IPR019999 Anthranilate synthase component I - like AU28_RS06790 IPR003141 Polymerase/histidinol phosphatase, N-terminal AU28_RS06790 IPR004013 PHP, C-terminal AU28_RS06790 IPR016195 Polymerase/histidinol phosphatase-like AU28_RS06795 IPR006070 YrdC-like domain AU28_RS06795 IPR017945 DHBP synthase RibB-like alpha/beta domain AU28_RS06800 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AU28_RS06800 IPR002942 RNA-binding S4 domain AU28_RS06800 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AU28_RS06800 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AU28_RS06800 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS06805 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR AU28_RS06805 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain AU28_RS06805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06810 IPR002347 Glucose/ribitol dehydrogenase AU28_RS06810 IPR016040 NAD(P)-binding domain AU28_RS06810 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS06815 IPR002142 Peptidase S49 AU28_RS06815 IPR013703 Peptidase S49, N-terminal proteobacteria AU28_RS06815 IPR029045 ClpP/crotonase-like domain AU28_RS06820 IPR019633 Protein of unknown function DUF2498 AU28_RS06825 IPR000380 DNA topoisomerase, type IA AU28_RS06825 IPR003601 DNA topoisomerase, type IA, domain 2 AU28_RS06825 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AU28_RS06825 IPR005733 DNA topoisomerase I, bacterial-type AU28_RS06825 IPR006171 Toprim domain AU28_RS06825 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type AU28_RS06825 IPR013497 DNA topoisomerase, type IA, central AU28_RS06825 IPR013498 DNA topoisomerase, type IA, zn finger AU28_RS06825 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AU28_RS06825 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AU28_RS06825 IPR023405 DNA topoisomerase, type IA, core domain AU28_RS06825 IPR023406 DNA topoisomerase, type IA, active site AU28_RS06825 IPR028612 DNA topoisomerase I, type IA AU28_RS06830 IPR000847 Transcription regulator HTH, LysR AU28_RS06830 IPR005119 LysR, substrate-binding AU28_RS06830 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS06840 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel AU28_RS06840 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha AU28_RS06840 IPR006249 Aconitate/iron regulatory protein 2 AU28_RS06840 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AU28_RS06840 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AU28_RS06840 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 AU28_RS06840 IPR015937 Aconitase/isopropylmalate dehydratase AU28_RS06840 IPR018136 Aconitase family, 4Fe-4S cluster binding site AU28_RS06845 IPR000926 GTP cyclohydrolase II, RibA AU28_RS06845 IPR032677 AU28_RS06845 AU28_RS06850 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AU28_RS06855 IPR010445 Protein of unknown function DUF1049 AU28_RS06855 IPR032906 AU28_RS06855 AU28_RS06860 IPR011990 Tetratricopeptide-like helical domain AU28_RS06860 IPR019734 Tetratricopeptide repeat AU28_RS06860 IPR030865 AU28_RS06860 AU28_RS06865 IPR001754 Orotidine 5'-phosphate decarboxylase domain AU28_RS06865 IPR011060 Ribulose-phosphate binding barrel AU28_RS06865 IPR013785 Aldolase-type TIM barrel AU28_RS06865 IPR014732 Orotidine 5'-phosphate decarboxylase AU28_RS06865 IPR018089 Orotidine 5'-phosphate decarboxylase, active site AU28_RS06870 IPR001950 Translation initiation factor SUI1 AU28_RS06870 IPR005872 Archaeal/bacterial translation initiation factor SUI1 AU28_RS06875 IPR008816 Glycine zipper 2TM domain AU28_RS06880 IPR001034 HTH DeoR N-terminal domain AU28_RS06880 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS06880 IPR014036 DeoR C-terminal sensor domain AU28_RS06880 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS06885 IPR020887 Uncharacterised protein family UPF0509 AU28_RS06890 IPR000014 PAS domain AU28_RS06890 IPR000160 GGDEF domain AU28_RS06890 IPR001633 EAL domain AU28_RS06890 IPR029787 Nucleotide cyclase AU28_RS06895 IPR003029 Ribosomal protein S1, RNA-binding domain AU28_RS06895 IPR004476 Ribonuclease II/ribonuclease R AU28_RS06895 IPR011129 Cold shock protein AU28_RS06895 IPR011804 Ribonuclease II AU28_RS06895 IPR012340 Nucleic acid-binding, OB-fold AU28_RS06895 IPR013223 Ribonuclease B, N-terminal OB domain AU28_RS06895 IPR022966 Ribonuclease II/R, conserved site AU28_RS06900 IPR029032 AhpD-like AU28_RS06905 IPR002347 Glucose/ribitol dehydrogenase AU28_RS06905 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) AU28_RS06905 IPR016040 NAD(P)-binding domain AU28_RS06925 IPR001633 EAL domain AU28_RS06930 IPR003439 ABC transporter-like AU28_RS06930 IPR003593 AAA+ ATPase domain AU28_RS06930 IPR017871 ABC transporter, conserved site AU28_RS06930 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06935 IPR003439 ABC transporter-like AU28_RS06935 IPR003593 AAA+ ATPase domain AU28_RS06935 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AU28_RS06935 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06940 IPR000515 MetI-like domain AU28_RS06940 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AU28_RS06945 IPR000515 MetI-like domain AU28_RS06950 IPR000914 Bacterial extracellular solute-binding protein, family 5 AU28_RS06950 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site AU28_RS06950 IPR030678 AU28_RS06950 AU28_RS06955 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS06955 IPR003593 AAA+ ATPase domain AU28_RS06955 IPR009057 Homeodomain-like AU28_RS06955 IPR014317 Transcription activator PspF AU28_RS06955 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS06955 IPR025944 Sigma-54 interaction domain, conserved site AU28_RS06955 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06960 IPR007157 PspA/IM30 AU28_RS06960 IPR014319 Phage shock protein, PspA AU28_RS06965 IPR009554 Phage shock protein, PspB AU28_RS06970 IPR007168 Phage shock protein, PspC, N-terminal AU28_RS06970 IPR014320 Phage shock protein, PspC AU28_RS06975 IPR014321 Phage shock protein, PspD AU28_RS06980 IPR001763 Rhodanese-like domain AU28_RS06980 IPR014323 Phage shock protein, PspE AU28_RS06985 IPR007413 Protein of unknown function DUF463, YcjX-like protein AU28_RS06990 IPR006507 Uncharacterised protein family UPF0283 AU28_RS06990 IPR021147 Protein of unknown function DUF697 AU28_RS06995 IPR000014 PAS domain AU28_RS06995 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS06995 IPR003593 AAA+ ATPase domain AU28_RS06995 IPR009057 Homeodomain-like AU28_RS06995 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AU28_RS06995 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS06995 IPR025944 Sigma-54 interaction domain, conserved site AU28_RS06995 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS06995 IPR030828 AU28_RS06995 AU28_RS07000 IPR002065 Putative thiol peroxidase Tpx AU28_RS07000 IPR012336 Thioredoxin-like fold AU28_RS07000 IPR013740 Redoxin AU28_RS07000 IPR018219 Thiol peroxidase conserved site AU28_RS07005 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS07005 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AU28_RS07005 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS07005 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AU28_RS07005 IPR029017 Enolase N-terminal domain-like AU28_RS07005 IPR029065 Enolase C-terminal domain-like AU28_RS07010 IPR000834 Peptidase M14, carboxypeptidase A AU28_RS07015 IPR000914 Bacterial extracellular solute-binding protein, family 5 AU28_RS07015 IPR030678 AU28_RS07015 AU28_RS07020 IPR008030 NmrA-like domain AU28_RS07020 IPR016040 NAD(P)-binding domain AU28_RS07025 IPR000847 Transcription regulator HTH, LysR AU28_RS07025 IPR005119 LysR, substrate-binding AU28_RS07025 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07030 IPR001395 Aldo/keto reductase AU28_RS07030 IPR018170 Aldo/keto reductase, conserved site AU28_RS07030 IPR020471 Aldo/keto reductase subgroup AU28_RS07030 IPR023210 NADP-dependent oxidoreductase domain AU28_RS07035 IPR002347 Glucose/ribitol dehydrogenase AU28_RS07035 IPR016040 NAD(P)-binding domain AU28_RS07035 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS07040 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS07040 IPR009057 Homeodomain-like AU28_RS07040 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS07040 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS07040 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AU28_RS07045 IPR010305 Protein of unknown function DUF903 AU28_RS07045 IPR010920 Like-Sm (LSM) domain AU28_RS07055 IPR009057 Homeodomain-like AU28_RS07055 IPR010499 Bacterial transcription activator, effector binding AU28_RS07055 IPR011256 Regulatory factor, effector binding domain AU28_RS07055 IPR018060 DNA binding HTH domain, AraC-type AU28_RS07055 IPR018062 HTH domain AraC-type, conserved site AU28_RS07055 IPR020449 Transcription regulator HTH, AraC- type AU28_RS07055 IPR029442 GyrI-like small molecule binding domain AU28_RS07065 IPR003535 Intimin/invasin bacterial adhesion mediator protein AU28_RS07065 IPR024519 Domain of unknown function DUF3442, intimin/invasin AU28_RS07070 IPR032262 AU28_RS07070 AU28_RS07080 IPR012336 Thioredoxin-like fold AU28_RS07080 IPR013740 Redoxin AU28_RS07085 IPR011008 Dimeric alpha-beta barrel AU28_RS07090 IPR005146 B3/B4 tRNA-binding domain AU28_RS07090 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AU28_RS07095 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS07095 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS07095 IPR011051 RmlC-like cupin domain AU28_RS07095 IPR013096 Cupin 2, conserved barrel AU28_RS07095 IPR014710 RmlC-like jelly roll fold AU28_RS07100 IPR006685 Mechanosensitive ion channel MscS AU28_RS07100 IPR006686 Mechanosensitive ion channel MscS, conserved site AU28_RS07100 IPR010920 Like-Sm (LSM) domain AU28_RS07100 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AU28_RS07100 IPR011066 Mechanosensitive ion channel MscS, C-terminal AU28_RS07105 IPR019685 Protein of unknown function DUF2534 AU28_RS07110 IPR006016 UspA AU28_RS07110 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS07115 IPR000595 Cyclic nucleotide-binding domain AU28_RS07115 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07115 IPR012318 Helix-turn-helix motif, Crp-type AU28_RS07115 IPR014710 RmlC-like jelly roll fold AU28_RS07115 IPR018335 Transcription regulator HTH, Crp-type, conserved site AU28_RS07115 IPR018490 Cyclic nucleotide-binding-like AU28_RS07120 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AU28_RS07120 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AU28_RS07120 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07120 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AU28_RS07120 IPR023546 Methylated-DNA--protein-cysteine methyltransferase AU28_RS07125 IPR002625 Smr protein/MutS2 C-terminal AU28_RS07130 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AU28_RS07130 IPR004090 Chemotaxis methyl-accepting receptor AU28_RS07135 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB AU28_RS07135 IPR023714 Zinc transport protein ZntB AU28_RS07140 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AU28_RS07140 IPR001650 Helicase, C-terminal AU28_RS07140 IPR005580 DbpA, RNA-binding AU28_RS07140 IPR011545 DEAD/DEAH box helicase domain AU28_RS07140 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS07140 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS07140 IPR028619 ATP-dependent RNA helicase DbpA AU28_RS07145 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase AU28_RS07145 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA AU28_RS07145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS07150 IPR002104 Integrase, catalytic AU28_RS07150 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS07150 IPR013762 Integrase-like, catalytic core AU28_RS07155 IPR010584 Enterobacterial exodeoxyribonuclease VIII AU28_RS07170 IPR025982 Superinfection exclusion protein B AU28_RS07175 IPR009821 Protein of unknown function DUF1391 AU28_RS07180 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS07180 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS07185 IPR010382 Protein of unknown function DUF977 AU28_RS07205 IPR000021 Hok/gef cell toxic protein AU28_RS07205 IPR018084 Hok/gef cell toxic protein, conserved site AU28_RS07215 IPR009797 Protein of unknown function DUF1367 AU28_RS07220 IPR010774 Protein of unknown function DUF1364 AU28_RS07225 IPR010557 Protein of unknown function DUF1133 AU28_RS07230 IPR029024 TerB-like AU28_RS07235 IPR008473 Bacteriophage D3, Orf90 AU28_RS07240 IPR008565 Protein of unknown function DUF847 AU28_RS07240 IPR018537 Peptidoglycan binding domain AU28_RS07240 IPR023346 Lysozyme-like domain AU28_RS07245 IPR013762 Integrase-like, catalytic core AU28_RS07255 IPR000390 Small multidrug resistance protein family AU28_RS07260 IPR006015 Universal stress protein A AU28_RS07260 IPR006016 UspA AU28_RS07260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS07270 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain AU28_RS07270 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal AU28_RS07270 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AU28_RS07270 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AU28_RS07270 IPR011895 Pyruvate-flavodoxin oxidoreductase AU28_RS07270 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS07270 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain AU28_RS07270 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain AU28_RS07270 IPR029061 Thiamin diphosphate-binding fold AU28_RS07270 IPR033412 AU28_RS07270 AU28_RS07280 IPR005590 Protein of unknown function DUF333 AU28_RS07285 IPR005184 Domain of unknown function DUF306, Meta/HslJ AU28_RS07290 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AU28_RS07290 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AU28_RS07290 IPR016040 NAD(P)-binding domain AU28_RS07290 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AU28_RS07290 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AU28_RS07295 IPR021730 Dicarboxylate transport AU28_RS07300 IPR025985 YnbE-like lipoprotein AU28_RS07305 IPR008309 Uncharacterised conserved protein UCP025560 AU28_RS07310 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V AU28_RS07310 IPR011057 Mss4-like AU28_RS07315 IPR003680 Flavodoxin-like fold AU28_RS07315 IPR023048 NADH-azoreductase, FMN-dependent AU28_RS07315 IPR029039 Flavoprotein-like AU28_RS07320 IPR001650 Helicase, C-terminal AU28_RS07320 IPR003593 AAA+ ATPase domain AU28_RS07320 IPR007502 Helicase-associated domain AU28_RS07320 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type AU28_RS07320 IPR011709 Domain of unknown function DUF1605 AU28_RS07320 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS07320 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal AU28_RS07320 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS07325 IPR003848 Domain of unknown function DUF218 AU28_RS07325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS07330 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AU28_RS07330 IPR016174 Di-haem cytochrome, transmembrane AU28_RS07335 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted AU28_RS07335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS07350 IPR000515 MetI-like domain AU28_RS07350 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AU28_RS07355 IPR003439 ABC transporter-like AU28_RS07355 IPR003593 AAA+ ATPase domain AU28_RS07355 IPR017871 ABC transporter, conserved site AU28_RS07355 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS07360 IPR000515 MetI-like domain AU28_RS07360 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AU28_RS07365 IPR001638 Extracellular solute-binding protein, family 3 AU28_RS07370 IPR010718 Protein of unknown function DUF1294 AU28_RS07375 IPR001087 Lipase, GDSL AU28_RS07375 IPR010637 Sif AU28_RS07375 IPR013830 AU28_RS07375 AU28_RS07385 IPR003735 Metal-sensitive transcriptional repressor AU28_RS07390 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS07390 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AU28_RS07390 IPR011032 GroES (chaperonin 10)-like AU28_RS07390 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS07390 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS07390 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase AU28_RS07390 IPR016040 NAD(P)-binding domain AU28_RS07390 IPR020843 Polyketide synthase, enoylreductase AU28_RS07395 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding AU28_RS07395 IPR003660 HAMP linker domain AU28_RS07395 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AU28_RS07395 IPR004090 Chemotaxis methyl-accepting receptor AU28_RS07395 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AU28_RS07400 IPR000847 Transcription regulator HTH, LysR AU28_RS07400 IPR005119 LysR, substrate-binding AU28_RS07400 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07405 IPR009770 Domain of unknown function DUF1338 AU28_RS07410 IPR000997 Cholinesterase AU28_RS07410 IPR002018 Carboxylesterase, type B AU28_RS07410 IPR019819 Carboxylesterase type B, conserved site AU28_RS07410 IPR019826 Carboxylesterase type B, active site AU28_RS07410 IPR029058 Alpha/Beta hydrolase fold AU28_RS07415 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal AU28_RS07415 IPR011013 Galactose mutarotase-like domain AU28_RS07415 IPR013783 Immunoglobulin-like fold AU28_RS07415 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D AU28_RS07415 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup AU28_RS07415 IPR014756 Immunoglobulin E-set AU28_RS07415 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AU28_RS07415 IPR023724 Glucan biosynthesis, MdoD AU28_RS07420 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AU28_RS07425 IPR000524 Transcription regulator HTH, GntR AU28_RS07425 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS07425 IPR011711 GntR, C-terminal AU28_RS07425 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07430 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS07430 IPR011032 GroES (chaperonin 10)-like AU28_RS07430 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS07430 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS07430 IPR016040 NAD(P)-binding domain AU28_RS07435 IPR000849 Sugar phosphate transporter AU28_RS07435 IPR011701 Major facilitator superfamily AU28_RS07435 IPR020846 Major facilitator superfamily domain AU28_RS07440 IPR002347 Glucose/ribitol dehydrogenase AU28_RS07440 IPR016040 NAD(P)-binding domain AU28_RS07440 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS07445 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS07445 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AU28_RS07445 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS07445 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AU28_RS07445 IPR029017 Enolase N-terminal domain-like AU28_RS07445 IPR029065 Enolase C-terminal domain-like AU28_RS07450 IPR000182 GNAT domain AU28_RS07450 IPR016181 Acyl-CoA N-acyltransferase AU28_RS07450 IPR024170 Aminoglycoside N6-acetyltransferase AU28_RS07455 IPR001034 HTH DeoR N-terminal domain AU28_RS07455 IPR014036 DeoR C-terminal sensor domain AU28_RS07455 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS07460 IPR000056 Ribulose-phosphate 3-epimerase-like AU28_RS07460 IPR011060 Ribulose-phosphate binding barrel AU28_RS07460 IPR013785 Aldolase-type TIM barrel AU28_RS07465 IPR002178 PTS EIIA type-2 domain AU28_RS07465 IPR016152 Phosphotransferase/anion transporter AU28_RS07470 IPR005137 Photosystem I BtpA, assembly AU28_RS07470 IPR011060 Ribulose-phosphate binding barrel AU28_RS07475 IPR004703 Phosphotransferase system, sugar-specific permease component AU28_RS07475 IPR013853 Galactitol permease IIC component AU28_RS07480 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS07485 IPR008007 Peptidase M42 AU28_RS07485 IPR023367 Peptidase M42, domain 2 AU28_RS07490 IPR000182 GNAT domain AU28_RS07490 IPR016181 Acyl-CoA N-acyltransferase AU28_RS07495 IPR011004 Trimeric LpxA-like AU28_RS07500 IPR004695 Voltage-dependent anion channel AU28_RS07500 IPR011552 Tellurite resistance protein TehA/malic acid transport protein AU28_RS07505 IPR004537 Tellurite resistance methyltransferase, TehB AU28_RS07505 IPR015985 Tellurite resistance methyltransferase TehB-like domain AU28_RS07505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS07510 IPR021747 Protein of unknown function DUF3313 AU28_RS07515 IPR004711 Benzoate transporter AU28_RS07520 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS07520 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS07520 IPR011051 RmlC-like cupin domain AU28_RS07520 IPR013096 Cupin 2, conserved barrel AU28_RS07520 IPR014710 RmlC-like jelly roll fold AU28_RS07525 IPR001539 Peptidase U32 AU28_RS07525 IPR020988 Peptidase U32, collagenase AU28_RS07530 IPR020117 Uncharacterised protein family YncJ AU28_RS07535 IPR010637 Sif AU28_RS07550 IPR000755 Peptidase M15D, VanX D-ala-D-ala dipeptidase AU28_RS07550 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AU28_RS07555 IPR000524 Transcription regulator HTH, GntR AU28_RS07555 IPR004839 Aminotransferase, class I/classII AU28_RS07555 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07555 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS07555 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS07560 IPR015590 Aldehyde dehydrogenase domain AU28_RS07560 IPR015657 Aminobutyraldehyde dehydrogenase AU28_RS07560 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS07560 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS07560 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS07560 IPR017749 1-pyrroline dehydrogenase AU28_RS07560 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AU28_RS07565 IPR019689 Pseudomonas phage PaP3, Orf56 AU28_RS07570 IPR017030 Virulence effector, SrfC AU28_RS07575 IPR009216 Virulence factor SrfB AU28_RS07585 IPR019671 Protein of unknown function DUF2526 AU28_RS07590 IPR006750 Protein of unknown function DUF606 AU28_RS07595 IPR016181 Acyl-CoA N-acyltransferase AU28_RS07600 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS07600 IPR011032 GroES (chaperonin 10)-like AU28_RS07600 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS07600 IPR016040 NAD(P)-binding domain AU28_RS07600 IPR020843 Polyketide synthase, enoylreductase AU28_RS07605 IPR000524 Transcription regulator HTH, GntR AU28_RS07605 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS07605 IPR011711 GntR, C-terminal AU28_RS07605 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07610 IPR000531 TonB-dependent receptor, beta-barrel AU28_RS07610 IPR012910 TonB-dependent receptor, plug AU28_RS07615 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AU28_RS07615 IPR015943 WD40/YVTN repeat-like-containing domain AU28_RS07620 IPR010305 Protein of unknown function DUF903 AU28_RS07620 IPR010920 Like-Sm (LSM) domain AU28_RS07625 IPR002293 Amino acid/polyamine transporter I AU28_RS07625 IPR004840 Amino acid permease, conserved site AU28_RS07625 IPR004841 Amino acid permease/ SLC12A domain AU28_RS07635 IPR001447 Arylamine N-acetyltransferase AU28_RS07640 IPR003719 Phenazine biosynthesis PhzF protein AU28_RS07645 IPR003816 Nitrate reductase, gamma subunit AU28_RS07645 IPR023234 NarG-like domain AU28_RS07650 IPR003765 Nitrate reductase chaperone, NarJ AU28_RS07650 IPR020945 DMSO/Nitrate reductase chaperone AU28_RS07655 IPR006547 Nitrate reductase, beta subunit AU28_RS07655 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS07655 IPR029263 Respiratory nitrate reductase beta, C-terminal AU28_RS07660 IPR006468 Nitrate reductase, alpha subunit AU28_RS07660 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS07660 IPR006656 Molybdopterin oxidoreductase AU28_RS07660 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS07660 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS07660 IPR009010 Aspartate decarboxylase-like domain AU28_RS07660 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AU28_RS07660 IPR028189 Nitrate reductase, alpha subunit, N-terminal AU28_RS07665 IPR004737 Nitrate transporter AU28_RS07665 IPR011701 Major facilitator superfamily AU28_RS07665 IPR020846 Major facilitator superfamily domain AU28_RS07670 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS07670 IPR009057 Homeodomain-like AU28_RS07670 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS07670 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS07675 IPR011701 Major facilitator superfamily AU28_RS07675 IPR020846 Major facilitator superfamily domain AU28_RS07680 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V AU28_RS07680 IPR011057 Mss4-like AU28_RS07685 IPR001702 Porin, Gram-negative type AU28_RS07685 IPR001897 Porin, gammaproteobacterial AU28_RS07685 IPR013793 Porin, Gram-negative type, conserved site AU28_RS07685 IPR023614 Porin domain AU28_RS07690 IPR000620 Drug/metabolite transporter AU28_RS07695 IPR006656 Molybdopterin oxidoreductase AU28_RS07695 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS07695 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AU28_RS07700 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic AU28_RS07700 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS07700 IPR006656 Molybdopterin oxidoreductase AU28_RS07700 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS07700 IPR009010 Aspartate decarboxylase-like domain AU28_RS07705 IPR006470 Formate dehydrogenase, beta subunit AU28_RS07705 IPR014603 Formate dehydrogenase, iron-sulphur subunit AU28_RS07705 IPR015246 Formate dehydrogenase, transmembrane AU28_RS07705 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS07705 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS07710 IPR006471 Formate dehydrogenase, gamma subunit AU28_RS07710 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AU28_RS07710 IPR016174 Di-haem cytochrome, transmembrane AU28_RS07715 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS07715 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AU28_RS07715 IPR011032 GroES (chaperonin 10)-like AU28_RS07715 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS07715 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS07715 IPR016040 NAD(P)-binding domain AU28_RS07715 IPR020843 Polyketide synthase, enoylreductase AU28_RS07720 IPR001891 Malic oxidoreductase AU28_RS07720 IPR012301 Malic enzyme, N-terminal domain AU28_RS07720 IPR012302 Malic enzyme, NAD-binding AU28_RS07720 IPR015884 Malic enzyme, conserved site AU28_RS07720 IPR016040 NAD(P)-binding domain AU28_RS07720 IPR023667 NAD-dependent malic enzyme, proteobacteria AU28_RS07725 IPR012607 Ribosomal protein S22 AU28_RS07730 IPR019625 Biofilm-dependent modulation protein Bdm, putative AU28_RS07735 IPR003718 OsmC/Ohr family AU28_RS07735 IPR015946 K homology domain-like, alpha/beta AU28_RS07735 IPR019904 Peroxiredoxin OsmC AU28_RS07740 IPR010486 HNS-dependent expression A/B AU28_RS07740 IPR028623 HNS-dependent expression B AU28_RS07745 IPR010686 Protein of unknown function DUF1264 AU28_RS07750 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AU28_RS07750 IPR012768 Malto-oligosyltrehalose trehalohydrolase AU28_RS07750 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS07750 IPR013783 Immunoglobulin-like fold AU28_RS07750 IPR014756 Immunoglobulin E-set AU28_RS07750 IPR015902 Glycoside hydrolase, family 13 AU28_RS07750 IPR017853 Glycoside hydrolase, superfamily AU28_RS07750 IPR022567 Domain of unknown function DUF3459 AU28_RS07755 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AU28_RS07755 IPR012767 Malto-oligosyltrehalose synthase AU28_RS07755 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS07755 IPR013797 Maltooligosyl trehalose synthase, N-terminal AU28_RS07755 IPR015902 Glycoside hydrolase, family 13 AU28_RS07755 IPR017853 Glycoside hydrolase, superfamily AU28_RS07760 IPR004193 Glycoside hydrolase, family 13, N-terminal AU28_RS07760 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AU28_RS07760 IPR011837 Glycogen debranching enzyme, GlgX type AU28_RS07760 IPR013780 Glycosyl hydrolase, family 13, all-beta AU28_RS07760 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS07760 IPR013783 Immunoglobulin-like fold AU28_RS07760 IPR014756 Immunoglobulin E-set AU28_RS07760 IPR015902 Glycoside hydrolase, family 13 AU28_RS07760 IPR017853 Glycoside hydrolase, superfamily AU28_RS07765 IPR004839 Aminotransferase, class I/classII AU28_RS07765 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS07765 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS07765 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS07765 IPR027619 Putative C-S lyase AU28_RS07770 IPR004770 Na+/H+ antiporter NhaC AU28_RS07770 IPR018461 Na+/H+ antiporter, NhaC-like AU28_RS07775 IPR000843 Transcription regulator HTH, LacI AU28_RS07775 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS07775 IPR028082 Periplasmic binding protein-like I AU28_RS07785 IPR010862 Protein of unknown function DUF1493 AU28_RS07795 IPR006175 YjgF/Yer057p/UK114 family AU28_RS07795 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AU28_RS07800 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA AU28_RS07805 IPR000835 MarR-type HTH domain AU28_RS07805 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07805 IPR023187 Transcriptional regulator MarR-type, conserved site AU28_RS07810 IPR002938 Monooxygenase, FAD-binding AU28_RS07810 IPR012336 Thioredoxin-like fold AU28_RS07810 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS07815 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG AU28_RS07815 IPR011701 Major facilitator superfamily AU28_RS07815 IPR020846 Major facilitator superfamily domain AU28_RS07820 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type AU28_RS07820 IPR029058 Alpha/Beta hydrolase fold AU28_RS07825 IPR000849 Sugar phosphate transporter AU28_RS07825 IPR011701 Major facilitator superfamily AU28_RS07825 IPR020846 Major facilitator superfamily domain AU28_RS07830 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS07830 IPR011032 GroES (chaperonin 10)-like AU28_RS07830 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS07830 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS07830 IPR016040 NAD(P)-binding domain AU28_RS07835 IPR000524 Transcription regulator HTH, GntR AU28_RS07835 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS07835 IPR011711 GntR, C-terminal AU28_RS07835 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07840 IPR003199 Choloylglycine hydrolase/Peptidase C59 family AU28_RS07840 IPR029055 Nucleophile aminohydrolases, N-terminal AU28_RS07840 IPR029132 Choloylglycine hydrolase/NAAA C-terminal AU28_RS07845 IPR001821 [NiFe]-hydrogenase, small subunit AU28_RS07845 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AU28_RS07845 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AU28_RS07845 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AU28_RS07850 IPR001501 Nickel-dependent hydrogenase, large subunit AU28_RS07850 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site AU28_RS07850 IPR029014 NiFe hydrogenase-like AU28_RS07855 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit AU28_RS07855 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AU28_RS07855 IPR016174 Di-haem cytochrome, transmembrane AU28_RS07860 IPR000671 Peptidase A31 family AU28_RS07860 IPR004419 Peptidase A31, hydrogenase expression/formation protein AU28_RS07860 IPR023430 Peptidase HybD-like domain AU28_RS07865 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AU28_RS07865 IPR019812 Hydrogenase assembly chaperone, conserved site AU28_RS07870 IPR010893 [NiFe]-hydrogenase maturation factor HyaE AU28_RS07870 IPR012336 Thioredoxin-like fold AU28_RS07875 IPR004039 Rubredoxin-type fold AU28_RS07875 IPR006894 HupH hydrogenase expression protein, C-terminal AU28_RS07875 IPR024935 Rubredoxin domain AU28_RS07880 IPR029014 NiFe hydrogenase-like AU28_RS07885 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF AU28_RS07890 IPR001702 Porin, Gram-negative type AU28_RS07890 IPR001897 Porin, gammaproteobacterial AU28_RS07890 IPR013793 Porin, Gram-negative type, conserved site AU28_RS07890 IPR023614 Porin domain AU28_RS07895 IPR027843 Domain of unknown function DUF4440 AU28_RS07895 IPR032710 AU28_RS07895 AU28_RS07900 IPR021134 Bestrophin/UPF0187 AU28_RS07905 IPR020378 Protein of unknown function DUF4186 AU28_RS07910 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS07910 IPR015868 Glutaminase AU28_RS07915 IPR015590 Aldehyde dehydrogenase domain AU28_RS07915 IPR016160 Aldehyde dehydrogenase, cysteine active site AU28_RS07915 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS07915 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS07915 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS07920 IPR000847 Transcription regulator HTH, LysR AU28_RS07920 IPR005119 LysR, substrate-binding AU28_RS07920 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07925 IPR011701 Major facilitator superfamily AU28_RS07925 IPR020846 Major facilitator superfamily domain AU28_RS07925 IPR023495 Sugar efflux transporter, putative AU28_RS07930 IPR002771 Multiple antibiotic resistance (MarC)-related AU28_RS07935 IPR000835 MarR-type HTH domain AU28_RS07935 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07935 IPR023187 Transcriptional regulator MarR-type, conserved site AU28_RS07940 IPR009057 Homeodomain-like AU28_RS07940 IPR018060 DNA binding HTH domain, AraC-type AU28_RS07940 IPR018062 HTH domain AraC-type, conserved site AU28_RS07945 IPR025732 MarB protein AU28_RS07950 IPR000620 Drug/metabolite transporter AU28_RS07955 IPR011701 Major facilitator superfamily AU28_RS07955 IPR020846 Major facilitator superfamily domain AU28_RS07965 IPR005220 Viral OB-fold, YgiW AU28_RS07965 IPR016052 Bacteriophage 933W, L0136 AU28_RS07970 IPR008136 CinA, C-terminal AU28_RS07975 IPR019626 Stress-induced protein, KGG, repeat AU28_RS07980 IPR001567 Peptidase M3A/M3B AU28_RS07980 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AU28_RS07980 IPR024079 Metallopeptidase, catalytic domain AU28_RS07980 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AU28_RS07985 IPR002347 Glucose/ribitol dehydrogenase AU28_RS07985 IPR016040 NAD(P)-binding domain AU28_RS07985 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS07990 IPR000524 Transcription regulator HTH, GntR AU28_RS07990 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS07990 IPR011711 GntR, C-terminal AU28_RS07990 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS07995 IPR017704 Putative selenium-binding protein YdfZ AU28_RS08000 IPR000669 Mannitol dehydrogenase AU28_RS08000 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS08000 IPR013118 Mannitol dehydrogenase, C-terminal AU28_RS08000 IPR013131 Mannitol dehydrogenase, N-terminal AU28_RS08000 IPR013328 Dehydrogenase, multihelical AU28_RS08000 IPR016040 NAD(P)-binding domain AU28_RS08000 IPR023027 Mannitol dehydrogenase, conserved site AU28_RS08005 IPR011701 Major facilitator superfamily AU28_RS08005 IPR020846 Major facilitator superfamily domain AU28_RS08010 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS08010 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AU28_RS08010 IPR011032 GroES (chaperonin 10)-like AU28_RS08010 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS08010 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS08010 IPR016040 NAD(P)-binding domain AU28_RS08015 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS08015 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AU28_RS08015 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS08015 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AU28_RS08015 IPR029017 Enolase N-terminal domain-like AU28_RS08015 IPR029065 Enolase C-terminal domain-like AU28_RS08020 IPR003844 Uncharacterised protein family UPF0060 AU28_RS08025 IPR009700 Protein of unknown function DUF1283 AU28_RS08030 IPR000182 GNAT domain AU28_RS08030 IPR016181 Acyl-CoA N-acyltransferase AU28_RS08035 IPR010646 Uncharacterised protein family UPF0257 AU28_RS08040 IPR010595 Protein of unknown function DUF1161 AU28_RS08045 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS08045 IPR006656 Molybdopterin oxidoreductase AU28_RS08045 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS08045 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS08045 IPR009010 Aspartate decarboxylase-like domain AU28_RS08045 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE AU28_RS08050 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS08050 IPR006656 Molybdopterin oxidoreductase AU28_RS08050 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS08050 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS08050 IPR009010 Aspartate decarboxylase-like domain AU28_RS08050 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE AU28_RS08050 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AU28_RS08055 IPR014297 Dimethylsulphoxide reductase, chain B AU28_RS08055 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS08055 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS08060 IPR007059 DMSO reductase anchor subunit (DmsC) AU28_RS08065 IPR020945 DMSO/Nitrate reductase chaperone AU28_RS08065 IPR026269 Tat proofreading chaperone DmsD-type AU28_RS08065 IPR028611 Tat proofreading chaperone DmsD AU28_RS08070 IPR000515 MetI-like domain AU28_RS08075 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain AU28_RS08080 IPR000515 MetI-like domain AU28_RS08085 IPR000644 CBS domain AU28_RS08085 IPR003439 ABC transporter-like AU28_RS08085 IPR003593 AAA+ ATPase domain AU28_RS08085 IPR005892 Glycine betaine transport ATP-binding subunit AU28_RS08085 IPR017871 ABC transporter, conserved site AU28_RS08085 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS08090 IPR001807 Chloride channel, voltage gated AU28_RS08090 IPR014743 Chloride channel, core AU28_RS08090 IPR023790 Chloride channel, voltage-gated, ClcB AU28_RS08095 IPR004472 Dethiobiotin synthase BioD AU28_RS08095 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS08100 IPR000600 ROK AU28_RS08100 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS08105 IPR000847 Transcription regulator HTH, LysR AU28_RS08105 IPR005119 LysR, substrate-binding AU28_RS08105 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS08110 IPR005829 Sugar transporter, conserved site AU28_RS08110 IPR011701 Major facilitator superfamily AU28_RS08110 IPR020846 Major facilitator superfamily domain AU28_RS08115 IPR009435 Acid shock AU28_RS08120 IPR001254 Peptidase S1 AU28_RS08120 IPR008256 Peptidase S1B AU28_RS08120 IPR009003 Trypsin-like cysteine/serine peptidase domain AU28_RS08120 IPR018114 Peptidase S1, trypsin family, active site AU28_RS08120 IPR033116 AU28_RS08120 AU28_RS08125 IPR000390 Small multidrug resistance protein family AU28_RS08125 IPR023737 Spermidine export protein MdtI AU28_RS08130 IPR000390 Small multidrug resistance protein family AU28_RS08130 IPR023740 Spermidine export protein MdtJ AU28_RS08135 IPR002549 Uncharacterised protein family UPF0118 AU28_RS08140 IPR012136 NADP transhydrogenase, beta subunit AU28_RS08140 IPR029035 DHS-like NAD/FAD-binding domain AU28_RS08145 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AU28_RS08145 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AU28_RS08145 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 AU28_RS08145 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 AU28_RS08145 IPR016040 NAD(P)-binding domain AU28_RS08145 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS08145 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal AU28_RS08145 IPR026255 NAD(P) transhydrogenase, alpha subunit AU28_RS08150 IPR010854 Domain of unknown function DUF1471 AU28_RS08150 IPR025539 YdgH protein AU28_RS08150 IPR025543 Dodecin-like AU28_RS08155 IPR002293 Amino acid/polyamine transporter I AU28_RS08155 IPR004754 Amino acid antiporter AU28_RS08160 IPR009707 GlpM AU28_RS08165 IPR001789 Signal transduction response regulator, receiver domain AU28_RS08165 IPR001867 Signal transduction response regulator, C-terminal AU28_RS08165 IPR011006 CheY-like superfamily AU28_RS08165 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS08175 IPR001702 Porin, Gram-negative type AU28_RS08175 IPR001897 Porin, gammaproteobacterial AU28_RS08175 IPR023614 Porin domain AU28_RS08180 IPR011059 Metal-dependent hydrolase, composite domain AU28_RS08180 IPR013108 Amidohydrolase 3 AU28_RS08180 IPR032466 AU28_RS08180 AU28_RS08185 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS08185 IPR003660 HAMP linker domain AU28_RS08185 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS08185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS08190 IPR008865 DNA replication terminus site-binding protein AU28_RS08195 IPR000362 Fumarate lyase family AU28_RS08195 IPR005677 Fumarate hydratase, class II AU28_RS08195 IPR008948 L-Aspartase-like AU28_RS08195 IPR018951 Fumarase C, C-terminal AU28_RS08195 IPR020557 Fumarate lyase, conserved site AU28_RS08195 IPR022761 Fumarate lyase, N-terminal AU28_RS08195 IPR024083 Fumarase/histidase, N-terminal AU28_RS08200 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AU28_RS08200 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AU28_RS08200 IPR011167 Iron-dependent fumarate hydratase AU28_RS08200 IPR020557 Fumarate lyase, conserved site AU28_RS08205 IPR001250 Mannose-6-phosphate isomerase, type I AU28_RS08205 IPR011051 RmlC-like cupin domain AU28_RS08205 IPR014710 RmlC-like jelly roll fold AU28_RS08205 IPR016305 Mannose-6-phosphate isomerase AU28_RS08205 IPR018050 Phosphomannose isomerase, type I, conserved site AU28_RS08210 IPR010352 Protein of unknown function DUF945 AU28_RS08215 IPR001996 Phosphotransferase system, IIB component, type 1 AU28_RS08220 IPR001365 Adenosine/AMP deaminase domain AU28_RS08220 IPR006330 Adenosine/adenine deaminase AU28_RS08220 IPR006650 Adenosine/AMP deaminase active site AU28_RS08220 IPR028893 Adenosine deaminase AU28_RS08220 IPR032466 AU28_RS08220 AU28_RS08225 IPR000683 Oxidoreductase, N-terminal AU28_RS08225 IPR004104 Oxidoreductase, C-terminal AU28_RS08225 IPR016040 NAD(P)-binding domain AU28_RS08235 IPR007985 Haemolysin expression modulating, HHA AU28_RS08240 IPR019690 Protein of unknown function DUF2569 AU28_RS08245 IPR003667 Electron transport complex, Rnf/Nqr AU28_RS08245 IPR011293 Electron transport complex, RnfA AU28_RS08250 IPR007202 4Fe-4S domain AU28_RS08250 IPR010207 Electron transport complex, RnfB AU28_RS08250 IPR016463 Electron transport complex, RnfB, Proteobacteria AU28_RS08250 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS08255 IPR009051 Alpha-helical ferredoxin AU28_RS08255 IPR010208 Electron transport complex protein RnfC AU28_RS08255 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit AU28_RS08255 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS08255 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS08255 IPR019554 Soluble ligand binding domain AU28_RS08255 IPR026902 RnfC Barrel sandwich hybrid domain AU28_RS08260 IPR004338 NADH-quinone reductase NQR2/RnfD AU28_RS08260 IPR011303 Electron transport complex, RnfD AU28_RS08265 IPR007329 FMN-binding AU28_RS08265 IPR010209 Electron transport complex, RnfG AU28_RS08270 IPR003667 Electron transport complex, Rnf/Nqr AU28_RS08270 IPR010968 Electron transport complex, RnfE AU28_RS08275 IPR000445 Helix-hairpin-helix motif AU28_RS08275 IPR003265 HhH-GPD domain AU28_RS08275 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AU28_RS08275 IPR004035 Endonuclease III, iron-sulphur binding site AU28_RS08275 IPR004036 Endonuclease III-like, conserved site-2 AU28_RS08275 IPR005759 Endonuclease III AU28_RS08275 IPR011257 DNA glycosylase AU28_RS08275 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AU28_RS08280 IPR000109 Proton-dependent oligopeptide transporter family AU28_RS08280 IPR005279 Amino acid/peptide transporter family AU28_RS08280 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site AU28_RS08280 IPR020846 Major facilitator superfamily domain AU28_RS08280 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A AU28_RS08285 IPR004045 Glutathione S-transferase, N-terminal AU28_RS08285 IPR004046 Glutathione S-transferase, C-terminal AU28_RS08285 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS08285 IPR012336 Thioredoxin-like fold AU28_RS08290 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase AU28_RS08290 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AU28_RS08290 IPR023685 Pyridoxal kinase PdxY AU28_RS08290 IPR029056 Ribokinase-like AU28_RS08295 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AU28_RS08295 IPR002305 Aminoacyl-tRNA synthetase, class Ic AU28_RS08295 IPR002307 Tyrosine-tRNA ligase AU28_RS08295 IPR002942 RNA-binding S4 domain AU28_RS08295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS08295 IPR024088 Tyrosine-tRNA ligase, bacterial-type AU28_RS08295 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 AU28_RS08300 IPR000659 Pyridoxamine 5'-phosphate oxidase AU28_RS08300 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain AU28_RS08300 IPR012349 FMN-binding split barrel AU28_RS08300 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal AU28_RS08300 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site AU28_RS08305 IPR018660 C-type lysozyme, inhibitor AU28_RS08310 IPR005338 Anhydro-N-acetylmuramic acid kinase AU28_RS08315 IPR008816 Glycine zipper 2TM domain AU28_RS08320 IPR000835 MarR-type HTH domain AU28_RS08320 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS08320 IPR023071 Transcriptional regulator, SlyA AU28_RS08320 IPR023187 Transcriptional regulator MarR-type, conserved site AU28_RS08325 IPR012451 Protein of unknown function DUF1656 AU28_RS08330 IPR006143 RND efflux pump, membrane fusion protein AU28_RS08330 IPR032317 AU28_RS08330 AU28_RS08335 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein AU28_RS08340 IPR001424 Superoxide dismutase, copper/zinc binding domain AU28_RS08340 IPR018152 Superoxide dismutase, copper/zinc, binding site AU28_RS08340 IPR024134 AU28_RS08340 AU28_RS08345 IPR001395 Aldo/keto reductase AU28_RS08345 IPR020471 Aldo/keto reductase subgroup AU28_RS08345 IPR023210 NADP-dependent oxidoreductase domain AU28_RS08350 IPR010710 Protein of unknown function DUF1289 AU28_RS08355 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS08355 IPR009057 Homeodomain-like AU28_RS08355 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS08355 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS08360 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AU28_RS08360 IPR013785 Aldolase-type TIM barrel AU28_RS08365 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AU28_RS08365 IPR004361 Glyoxalase I AU28_RS08365 IPR018146 Glyoxalase I, conserved site AU28_RS08365 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AU28_RS08370 IPR005987 Ribonuclease T AU28_RS08370 IPR012337 Ribonuclease H-like domain AU28_RS08370 IPR013520 Exonuclease, RNase T/DNA polymerase III AU28_RS08375 IPR002109 Glutaredoxin AU28_RS08375 IPR004480 Monothiol glutaredoxin-related AU28_RS08375 IPR012336 Thioredoxin-like fold AU28_RS08375 IPR014434 Monothiol glutaredoxin AU28_RS08380 IPR000064 Endopeptidase, NLPC/P60 domain AU28_RS08385 IPR001189 Manganese/iron superoxide dismutase AU28_RS08385 IPR019831 Manganese/iron superoxide dismutase, N-terminal AU28_RS08385 IPR019832 Manganese/iron superoxide dismutase, C-terminal AU28_RS08385 IPR019833 Manganese/iron superoxide dismutase, binding site AU28_RS08390 IPR000843 Transcription regulator HTH, LacI AU28_RS08390 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS08390 IPR023588 Transcription regulator HTH, PurR AU28_RS08390 IPR028082 Periplasmic binding protein-like I AU28_RS08395 IPR000847 Transcription regulator HTH, LysR AU28_RS08395 IPR005119 LysR, substrate-binding AU28_RS08395 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS08400 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AU28_RS08400 IPR011701 Major facilitator superfamily AU28_RS08400 IPR020846 Major facilitator superfamily domain AU28_RS08405 IPR003333 Mycolic acid cyclopropane synthase AU28_RS08405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS08410 IPR001783 Lumazine-binding protein AU28_RS08410 IPR017938 Riboflavin synthase-like beta-barrel AU28_RS08410 IPR023366 ATP synthase subunit alpha-like domain AU28_RS08410 IPR026017 Lumazine-binding domain AU28_RS08415 IPR002528 Multi antimicrobial extrusion protein AU28_RS08415 IPR022913 Multidrug resistance protein MdtK AU28_RS08430 IPR006135 Type III secretion system substrate exporter AU28_RS08430 IPR006307 Type III exporter system, secretion apparatus protein BsaZ AU28_RS08430 IPR029025 Type III secretion system substrate exporter, C-terminal AU28_RS08435 IPR002010 Type III secretion system inner membrane R protein AU28_RS08435 IPR006304 Type III secretion protein SpaR/YscT AU28_RS08440 IPR002191 Bacterial export protein family 3 AU28_RS08440 IPR006306 Type III secretion protein HrpO AU28_RS08445 IPR005773 Yop virulence translocation protein R AU28_RS08445 IPR005838 Type III secretion system inner membrane P protein AU28_RS08450 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb AU28_RS08450 IPR001543 Surface presentation of antigen (SpoA) AU28_RS08450 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO AU28_RS08465 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AU28_RS08465 IPR003593 AAA+ ATPase domain AU28_RS08465 IPR005714 ATPase, type III secretion system, FliI/YscN AU28_RS08465 IPR013380 ATPase, type III secretion system, H+-transporting AU28_RS08465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS08470 IPR001712 Type III secretion system FHIPEP AU28_RS08470 IPR006302 Type III secretion protein HrcV AU28_RS08470 IPR025505 FHIPEP conserved site AU28_RS08475 IPR017033 Type III secretion system apparatus protein SsaM AU28_RS08480 IPR010812 Hypersensitivity response secretion-like, HrpJ AU28_RS08480 IPR013351 Type III secretion system effector delivery regulator TyeA-related AU28_RS08485 IPR012842 Type III secretion system HrpE/YscL AU28_RS08490 IPR025292 Type III secretion system protein AU28_RS08495 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ AU28_RS08495 IPR006182 Secretory protein YscJ/FliF AU28_RS08500 IPR012670 Type III secretion system, YscI/HrpB AU28_RS08505 IPR010437 Type III secretion system SsaH AU28_RS08510 IPR011841 Type III secretion system, needle protein AU28_RS08510 IPR021123 Type III secretion, needle-protein-like AU28_RS08525 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AU28_RS08525 IPR011990 Tetratricopeptide-like helical domain AU28_RS08525 IPR019734 Tetratricopeptide repeat AU28_RS08530 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 AU28_RS08540 IPR006972 Secretion system effector C, SseC-like AU28_RS08545 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AU28_RS08545 IPR011990 Tetratricopeptide-like helical domain AU28_RS08545 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup AU28_RS08550 IPR005095 EspA-like secreted protein AU28_RS08560 IPR012671 Type III secretion system, secretion protein E AU28_RS08565 IPR012843 Type III secretion system YscD/HrpQ AU28_RS08565 IPR032034 AU28_RS08565 AU28_RS08570 IPR003522 Type III secretion system outer membrane pore YscC/HrcC AU28_RS08570 IPR004845 Type II secretion system GspD, conserved site AU28_RS08570 IPR004846 Type II/III secretion system AU28_RS08570 IPR005644 NolW-like AU28_RS08580 IPR001789 Signal transduction response regulator, receiver domain AU28_RS08580 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS08580 IPR003660 HAMP linker domain AU28_RS08580 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS08580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS08580 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AU28_RS08580 IPR011006 CheY-like superfamily AU28_RS08585 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS08585 IPR001789 Signal transduction response regulator, receiver domain AU28_RS08585 IPR011006 CheY-like superfamily AU28_RS08585 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS08585 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS08590 IPR000551 MerR-type HTH domain AU28_RS08590 IPR009061 DNA binding domain, putative AU28_RS08595 IPR007553 Domain of unknown function DUF523 AU28_RS08595 IPR013560 Domain of unknown function DUF1722 AU28_RS08595 IPR017087 Uncharacterised conserved protein UCP037004 AU28_RS08600 IPR024493 Protein of unknown function DUF2767 AU28_RS08605 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS08605 IPR001789 Signal transduction response regulator, receiver domain AU28_RS08605 IPR011006 CheY-like superfamily AU28_RS08605 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS08610 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS08610 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS08610 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS08615 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS08615 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS08620 IPR005614 NrfD family AU28_RS08625 IPR006656 Molybdopterin oxidoreductase AU28_RS08625 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS08625 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS08625 IPR009010 Aspartate decarboxylase-like domain AU28_RS08630 IPR001034 HTH DeoR N-terminal domain AU28_RS08630 IPR002139 Ribokinase AU28_RS08630 IPR011611 Carbohydrate kinase PfkB AU28_RS08630 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS08630 IPR029056 Ribokinase-like AU28_RS08635 IPR010768 Domain of unknown function DUF1355 AU28_RS08635 IPR017027 Uncharacterised conserved protein UCP034405 AU28_RS08635 IPR029062 Class I glutamine amidotransferase-like AU28_RS08640 IPR000073 Alpha/beta hydrolase fold-1 AU28_RS08640 IPR002410 Peptidase S33 AU28_RS08640 IPR005945 Proline-specific peptidase AU28_RS08640 IPR029058 Alpha/Beta hydrolase fold AU28_RS08645 IPR002293 Amino acid/polyamine transporter I AU28_RS08650 IPR001697 Pyruvate kinase AU28_RS08650 IPR011037 Pyruvate kinase-like, insert domain AU28_RS08650 IPR015793 Pyruvate kinase, barrel AU28_RS08650 IPR015794 Pyruvate kinase, alpha/beta AU28_RS08650 IPR015795 Pyruvate kinase, C-terminal AU28_RS08650 IPR015806 Pyruvate kinase, beta-barrel insert domain AU28_RS08650 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS08650 IPR018209 Pyruvate kinase, active site AU28_RS08655 IPR006817 Lipoprotein leucine-zipper AU28_RS08655 IPR016367 Murein-lipoprotein AU28_RS08660 IPR006817 Lipoprotein leucine-zipper AU28_RS08660 IPR016367 Murein-lipoprotein AU28_RS08665 IPR005490 L,D-transpeptidase catalytic domain AU28_RS08665 IPR018392 LysM domain AU28_RS08670 IPR003808 Fe-S metabolism associated domain, SufE-like AU28_RS08670 IPR023939 Cysteine desulfuration protein SufE AU28_RS08675 IPR000192 Aminotransferase class V domain AU28_RS08675 IPR010970 Cysteine desulfurase, SufS AU28_RS08675 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS08675 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS08675 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS08675 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site AU28_RS08680 IPR000825 SUF system FeS cluster assembly, SufBD AU28_RS08680 IPR011542 SUF system FeS cluster assembly, SufD AU28_RS08685 IPR003439 ABC transporter-like AU28_RS08685 IPR003593 AAA+ ATPase domain AU28_RS08685 IPR010230 FeS cluster assembly SUF system, ATPase SufC AU28_RS08685 IPR017871 ABC transporter, conserved site AU28_RS08685 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS08690 IPR000825 SUF system FeS cluster assembly, SufBD AU28_RS08690 IPR010231 SUF system FeS cluster assembly, SufB AU28_RS08695 IPR000361 FeS cluster biogenesis AU28_RS08695 IPR011298 SUF system FeS cluster assembly, SufA scaffold AU28_RS08695 IPR016092 FeS cluster insertion protein AU28_RS08695 IPR017870 FeS cluster insertion, C-terminal, conserved site AU28_RS08700 IPR001991 Sodium:dicarboxylate symporter AU28_RS08705 IPR031830 AU28_RS08705 AU28_RS08710 IPR003736 Phenylacetic acid degradation-related domain AU28_RS08710 IPR006683 Thioesterase superfamily AU28_RS08710 IPR029069 HotDog domain AU28_RS08710 IPR030863 AU28_RS08710 AU28_RS08715 IPR004113 FAD-linked oxidase, C-terminal AU28_RS08715 IPR006094 FAD linked oxidase, N-terminal AU28_RS08715 IPR009051 Alpha-helical ferredoxin AU28_RS08715 IPR016164 FAD-linked oxidase-like, C-terminal AU28_RS08715 IPR016166 FAD-binding, type 2 AU28_RS08715 IPR016167 FAD-binding, type 2, subdomain 1 AU28_RS08715 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AU28_RS08715 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS08715 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS08720 IPR002549 Uncharacterised protein family UPF0118 AU28_RS08725 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS08725 IPR015060 Protein of unknown function DUF1870 AU28_RS08725 IPR027910 YdiL-like domain AU28_RS08730 IPR005829 Sugar transporter, conserved site AU28_RS08730 IPR011701 Major facilitator superfamily AU28_RS08730 IPR020846 Major facilitator superfamily domain AU28_RS08735 IPR011701 Major facilitator superfamily AU28_RS08735 IPR020846 Major facilitator superfamily domain AU28_RS08740 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AU28_RS08740 IPR016040 NAD(P)-binding domain AU28_RS08740 IPR022872 Quinate/Shikimate dehydrogenase AU28_RS08740 IPR022893 Shikimate, quinate/shikimate dehydrogenase AU28_RS08745 IPR001381 Dehydroquinase class I AU28_RS08745 IPR013785 Aldolase-type TIM barrel AU28_RS08745 IPR018508 3-dehydroquinate dehydratase, active site AU28_RS08750 IPR004165 Coenzyme A transferase family I AU28_RS08750 IPR014388 3-oxoacid CoA-transferase AU28_RS08755 IPR006089 Acyl-CoA dehydrogenase, conserved site AU28_RS08755 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AU28_RS08755 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AU28_RS08755 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AU28_RS08755 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AU28_RS08760 IPR009057 Homeodomain-like AU28_RS08760 IPR011051 RmlC-like cupin domain AU28_RS08760 IPR013096 Cupin 2, conserved barrel AU28_RS08760 IPR014710 RmlC-like jelly roll fold AU28_RS08760 IPR018060 DNA binding HTH domain, AraC-type AU28_RS08760 IPR020449 Transcription regulator HTH, AraC- type AU28_RS08765 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site AU28_RS08765 IPR012255 Electron transfer flavoprotein, beta subunit AU28_RS08765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS08765 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AU28_RS08775 IPR002938 Monooxygenase, FAD-binding AU28_RS08775 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS08780 IPR012206 Ferredoxin-like, FixX AU28_RS08780 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS08785 IPR000873 AMP-dependent synthetase/ligase AU28_RS08785 IPR020845 AMP-binding, conserved site AU28_RS08785 IPR025110 AMP-binding enzyme C-terminal domain AU28_RS08790 IPR000121 PEP-utilising enzyme, C-terminal AU28_RS08790 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding AU28_RS08790 IPR006319 Phosphoenolpyruvate synthase AU28_RS08790 IPR008279 PEP-utilising enzyme, mobile domain AU28_RS08790 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS08790 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS08790 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS08790 IPR018274 PEP-utilising enzyme, active site AU28_RS08790 IPR023151 PEP-utilising enzyme, conserved site AU28_RS08795 IPR005177 Bifunctional kinase-pyrophosphorylase AU28_RS08795 IPR026530 Phosphoenolpyruvate synthase regulatory protein AU28_RS08800 IPR006218 DAHP synthetase I/KDSA AU28_RS08800 IPR006219 DHAP synthase, class 1 AU28_RS08800 IPR013785 Aldolase-type TIM barrel AU28_RS08805 IPR019600 Hemin uptake protein HemP AU28_RS08810 IPR003846 Uncharacterised protein family UPF0061 AU28_RS08815 IPR001633 EAL domain AU28_RS08820 IPR000064 Endopeptidase, NLPC/P60 domain AU28_RS08825 IPR003439 ABC transporter-like AU28_RS08825 IPR003593 AAA+ ATPase domain AU28_RS08825 IPR017871 ABC transporter, conserved site AU28_RS08825 IPR023693 ABC transporter, vitamin B12, BtuD AU28_RS08825 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS08830 IPR000889 Glutathione peroxidase AU28_RS08830 IPR012336 Thioredoxin-like fold AU28_RS08830 IPR029759 Glutathione peroxidase active site AU28_RS08830 IPR029760 Glutathione peroxidase conserved site AU28_RS08835 IPR000522 ABC transporter, permease protein AU28_RS08835 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC AU28_RS08835 IPR029022 ABC transporter, BtuC-like AU28_RS08840 IPR000119 Histone-like bacterial DNA-binding protein AU28_RS08840 IPR005684 Integration host factor, alpha subunit AU28_RS08840 IPR010992 Integration host factor (IHF)-like DNA-binding domain AU28_RS08840 IPR020816 Histone-like DNA-binding protein, conserved site AU28_RS08845 IPR002547 tRNA-binding domain AU28_RS08845 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit AU28_RS08845 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding AU28_RS08845 IPR005146 B3/B4 tRNA-binding domain AU28_RS08845 IPR005147 tRNA synthetase, B5-domain AU28_RS08845 IPR009061 DNA binding domain, putative AU28_RS08845 IPR012340 Nucleic acid-binding, OB-fold AU28_RS08845 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AU28_RS08850 IPR002319 Phenylalanyl-tRNA synthetase AU28_RS08850 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal AU28_RS08850 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AU28_RS08850 IPR010978 tRNA-binding arm AU28_RS08850 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial AU28_RS08855 IPR005813 Ribosomal protein L20 AU28_RS08860 IPR001706 Ribosomal protein L35, non-mitochondrial AU28_RS08860 IPR018265 Ribosomal protein L35, conserved site AU28_RS08860 IPR021137 Ribosomal protein L35 AU28_RS08865 IPR001288 Translation initiation factor 3 AU28_RS08865 IPR019813 Translation initiation factor 3, conserved site AU28_RS08865 IPR019814 Translation initiation factor 3, N-terminal AU28_RS08865 IPR019815 Translation initiation factor 3, C-terminal AU28_RS08870 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain AU28_RS08870 IPR002320 Threonine-tRNA ligase, class IIa AU28_RS08870 IPR004095 TGS AU28_RS08870 IPR004154 Anticodon-binding AU28_RS08870 IPR012675 Beta-grasp domain AU28_RS08870 IPR012676 TGS-like AU28_RS08870 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AU28_RS08870 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain AU28_RS08890 IPR001604 DNA/RNA non-specific endonuclease AU28_RS08890 IPR018524 DNA/RNA non-specific endonuclease, active site AU28_RS08890 IPR020821 Extracellular Endonuclease, subunit A AU28_RS08900 IPR018707 Protein of unknown function DUF2219 AU28_RS08905 IPR007433 Protein of unknown function DUF481 AU28_RS08910 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS08910 IPR011611 Carbohydrate kinase PfkB AU28_RS08910 IPR017583 Tagatose/fructose phosphokinase AU28_RS08910 IPR029056 Ribokinase-like AU28_RS08915 IPR020499 Uncharacterised protein family YdiZ AU28_RS08915 IPR022597 Protein of unknown function DUF2622 AU28_RS08920 IPR011009 Protein kinase-like domain AU28_RS08920 IPR016477 Fructosamine/Ketosamine-3-kinase AU28_RS08925 IPR025229 YniB-like protein AU28_RS08930 IPR006439 HAD hydrolase, subfamily IA AU28_RS08930 IPR023198 Phosphoglycolate phosphatase, domain 2 AU28_RS08930 IPR023214 HAD-like domain AU28_RS08935 IPR007404 Protein of unknown function DUF457 AU28_RS08935 IPR016956 LexA regulated metal-dependent membrane hydrolase, predicted AU28_RS08940 IPR001991 Sodium:dicarboxylate symporter AU28_RS08945 IPR019666 Cell division activator CedA AU28_RS08950 IPR002226 Catalase haem-binding site AU28_RS08950 IPR010582 Catalase immune-responsive domain AU28_RS08950 IPR011614 Catalase core domain AU28_RS08950 IPR018028 Catalase, mono-functional, haem-containing AU28_RS08950 IPR020835 Catalase-like domain AU28_RS08950 IPR024708 Catalase active site AU28_RS08950 IPR024712 Catalase, mono-functional, haem-containing, clade 2 AU28_RS08950 IPR029062 Class I glutamine amidotransferase-like AU28_RS08955 IPR002509 Polysaccharide deacetylase AU28_RS08955 IPR006879 Uncharacterised protein family UPF0249/HpnK AU28_RS08955 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AU28_RS08955 IPR022948 Uncharacterised protein family UPF0249 AU28_RS08960 IPR001088 Glycoside hydrolase, family 4 AU28_RS08960 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AU28_RS08960 IPR016040 NAD(P)-binding domain AU28_RS08960 IPR019802 Glycoside hydrolase, family 4, conserved site AU28_RS08960 IPR022616 Glycosyl hydrolase, family 4, C-terminal AU28_RS08965 IPR009057 Homeodomain-like AU28_RS08965 IPR011051 RmlC-like cupin domain AU28_RS08965 IPR013096 Cupin 2, conserved barrel AU28_RS08965 IPR014710 RmlC-like jelly roll fold AU28_RS08965 IPR018060 DNA binding HTH domain, AraC-type AU28_RS08965 IPR018062 HTH domain AraC-type, conserved site AU28_RS08965 IPR020449 Transcription regulator HTH, AraC- type AU28_RS08970 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit AU28_RS08975 IPR003352 Phosphotransferase system, EIIC AU28_RS08975 IPR004501 Phosphotransferase system, EIIC component, type 3 AU28_RS08975 IPR004796 Phosphotransferase system, cellobiose-type IIC component AU28_RS08980 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS08980 IPR013012 Phosphotransferase system, EIIB component, type 3 AU28_RS08985 IPR007450 Lipoprotein SmpA/OmlA AU28_RS08990 IPR003694 NAD(+) synthetase AU28_RS08990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS08990 IPR022310 NAD/GMP synthase AU28_RS08990 IPR022926 NH(3)-dependent NAD(+) synthetase AU28_RS08995 IPR000305 GIY-YIG nuclease superfamily AU28_RS09000 IPR012899 LTXXQ motif family protein AU28_RS09005 IPR007036 Succinylglutamate desuccinylase/aspartoacylase AU28_RS09005 IPR016681 Succinylglutamate desuccinylase AU28_RS09010 IPR007079 Succinylarginine dihydrolase AU28_RS09015 IPR015590 Aldehyde dehydrogenase domain AU28_RS09015 IPR016160 Aldehyde dehydrogenase, cysteine active site AU28_RS09015 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS09015 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS09015 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS09015 IPR017649 Succinylglutamic semialdehyde dehydrogenase AU28_RS09015 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AU28_RS09020 IPR007041 Arginine N-succinyltransferase Ast/AOST AU28_RS09020 IPR016181 Acyl-CoA N-acyltransferase AU28_RS09020 IPR017650 Arginine N-succinyltransferase AstA AU28_RS09025 IPR004636 Acetylornithine/Succinylornithine transaminase family AU28_RS09025 IPR005814 Aminotransferase class-III AU28_RS09025 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS09025 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS09025 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS09025 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria AU28_RS09025 IPR026330 Succinylornithine transaminase AU28_RS09030 IPR004808 AP endonuclease 1 AU28_RS09030 IPR005135 Endonuclease/exonuclease/phosphatase AU28_RS09030 IPR020847 AP endonuclease 1, binding site AU28_RS09030 IPR020848 AP endonuclease 1, conserved site AU28_RS09035 IPR000086 NUDIX hydrolase domain AU28_RS09035 IPR015797 NUDIX hydrolase domain-like AU28_RS09035 IPR020084 NUDIX hydrolase, conserved site AU28_RS09035 IPR020476 NUDIX hydrolase AU28_RS09040 IPR009971 Protein of unknown function DUF1496 AU28_RS09045 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AU28_RS09045 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AU28_RS09045 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AU28_RS09045 IPR014362 Glutamate dehydrogenase AU28_RS09045 IPR016040 NAD(P)-binding domain AU28_RS09050 IPR000380 DNA topoisomerase, type IA AU28_RS09050 IPR003601 DNA topoisomerase, type IA, domain 2 AU28_RS09050 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AU28_RS09050 IPR005738 DNA topoisomerase III AU28_RS09050 IPR006171 Toprim domain AU28_RS09050 IPR013497 DNA topoisomerase, type IA, central AU28_RS09050 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AU28_RS09050 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AU28_RS09050 IPR023405 DNA topoisomerase, type IA, core domain AU28_RS09050 IPR023406 DNA topoisomerase, type IA, active site AU28_RS09055 IPR004536 Selenide water dikinase AU28_RS09055 IPR010918 AIR synthase-related protein, C-terminal domain AU28_RS09055 IPR016188 PurM, N-terminal-like AU28_RS09055 IPR023061 Selenide, water dikinase, class I AU28_RS09060 IPR000415 Nitroreductase-like AU28_RS09060 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AU28_RS09060 IPR029479 Nitroreductase AU28_RS09065 IPR002142 Peptidase S49 AU28_RS09065 IPR004634 Peptidase S49, protease IV AU28_RS09065 IPR004635 Peptidase S49, SppA AU28_RS09065 IPR029045 ClpP/crotonase-like domain AU28_RS09070 IPR006033 L-asparaginase, type I AU28_RS09070 IPR006034 Asparaginase/glutaminase AU28_RS09070 IPR020827 Asparaginase/glutaminase, active site 1 AU28_RS09070 IPR027473 L-asparaginase, C-terminal domain AU28_RS09070 IPR027474 L-asparaginase, N-terminal AU28_RS09070 IPR027475 Asparaginase/glutaminase, active site 2 AU28_RS09075 IPR000868 Isochorismatase-like AU28_RS09080 IPR005828 General substrate transporter AU28_RS09080 IPR020846 Major facilitator superfamily domain AU28_RS09085 IPR001034 HTH DeoR N-terminal domain AU28_RS09085 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS09085 IPR014036 DeoR C-terminal sensor domain AU28_RS09085 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS09090 IPR001395 Aldo/keto reductase AU28_RS09090 IPR020471 Aldo/keto reductase subgroup AU28_RS09090 IPR023210 NADP-dependent oxidoreductase domain AU28_RS09095 IPR002139 Ribokinase AU28_RS09095 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS09095 IPR011611 Carbohydrate kinase PfkB AU28_RS09095 IPR029056 Ribokinase-like AU28_RS09100 IPR000771 Ketose-bisphosphate aldolase, class-II AU28_RS09100 IPR013785 Aldolase-type TIM barrel AU28_RS09105 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS09105 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AU28_RS09105 IPR011032 GroES (chaperonin 10)-like AU28_RS09105 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS09105 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS09105 IPR016040 NAD(P)-binding domain AU28_RS09105 IPR020843 Polyketide synthase, enoylreductase AU28_RS09110 IPR005828 General substrate transporter AU28_RS09110 IPR020846 Major facilitator superfamily domain AU28_RS09115 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS09115 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AU28_RS09115 IPR011032 GroES (chaperonin 10)-like AU28_RS09115 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS09115 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS09115 IPR016040 NAD(P)-binding domain AU28_RS09115 IPR020843 Polyketide synthase, enoylreductase AU28_RS09120 IPR009749 Protein of unknown function DUF1315 AU28_RS09125 IPR002579 Peptide methionine sulphoxide reductase MrsB AU28_RS09125 IPR011057 Mss4-like AU28_RS09125 IPR028427 Peptide methionine sulfoxide reductase AU28_RS09130 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AU28_RS09130 IPR016040 NAD(P)-binding domain AU28_RS09130 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AU28_RS09130 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AU28_RS09130 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AU28_RS09130 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AU28_RS09135 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase AU28_RS09135 IPR011013 Galactose mutarotase-like domain AU28_RS09135 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup AU28_RS09135 IPR025532 Glucose-6-phosphate 1-epimerase AU28_RS09140 IPR001395 Aldo/keto reductase AU28_RS09140 IPR020471 Aldo/keto reductase subgroup AU28_RS09140 IPR023210 NADP-dependent oxidoreductase domain AU28_RS09145 IPR007197 Radical SAM AU28_RS09145 IPR013785 Aldolase-type TIM barrel AU28_RS09145 IPR023867 Anaerobic sulphatase maturase, radical SAM AU28_RS09145 IPR023885 4Fe4S-binding SPASM domain AU28_RS09150 IPR010583 MltA-interacting MipA AU28_RS09155 IPR010650 PrkA C-terminal domain AU28_RS09155 IPR013153 PrkA AAA domain AU28_RS09155 IPR016230 Serine-protein kinase, PrkA AU28_RS09155 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS09160 IPR006698 Thermus phage phiYS40, Orf56 AU28_RS09165 IPR000160 GGDEF domain AU28_RS09165 IPR029787 Nucleotide cyclase AU28_RS09165 IPR033420 AU28_RS09165 AU28_RS09170 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AU28_RS09180 IPR007382 Uncharacterised protein family UPF0756, transmembrame AU28_RS09185 IPR003313 AraC-type arabinose-binding/dimerisation domain AU28_RS09185 IPR009057 Homeodomain-like AU28_RS09185 IPR011051 RmlC-like cupin domain AU28_RS09185 IPR014710 RmlC-like jelly roll fold AU28_RS09185 IPR018060 DNA binding HTH domain, AraC-type AU28_RS09185 IPR018062 HTH domain AraC-type, conserved site AU28_RS09190 IPR004747 Cyanate transport system protein AU28_RS09190 IPR011701 Major facilitator superfamily AU28_RS09190 IPR020846 Major facilitator superfamily domain AU28_RS09195 IPR007438 Protein of unknown function DUF488 AU28_RS09205 IPR005590 Protein of unknown function DUF333 AU28_RS09210 IPR007341 Transglycosylase-associated protein AU28_RS09225 IPR015051 Protein YoaG AU28_RS09230 IPR014510 Tellurite resistance predicted, YeaR AU28_RS09230 IPR014710 RmlC-like jelly roll fold AU28_RS09230 IPR015392 Domain of unknown function DUF1971 AU28_RS09235 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AU28_RS09240 IPR002701 Chorismate mutase AU28_RS09240 IPR008240 Chorismate mutase, periplasmic AU28_RS09240 IPR020822 Chorismate mutase, type II AU28_RS09245 IPR024753 Regulatory protein AriR AU28_RS09250 IPR000551 MerR-type HTH domain AU28_RS09250 IPR009061 DNA binding domain, putative AU28_RS09255 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS09255 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS09255 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS09260 IPR002934 Nucleotidyl transferase domain AU28_RS09260 IPR024172 Streptomycin 3''-adenylyltransferase AU28_RS09260 IPR025184 Domain of unknown function DUF4111 AU28_RS09265 IPR011038 Calycin-like AU28_RS09265 IPR012674 Calycin AU28_RS09265 IPR015304 ZinT domain AU28_RS09275 IPR005560 Protein of unknown function DUF326 AU28_RS09280 IPR006685 Mechanosensitive ion channel MscS AU28_RS09280 IPR010920 Like-Sm (LSM) domain AU28_RS09280 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AU28_RS09280 IPR011066 Mechanosensitive ion channel MscS, C-terminal AU28_RS09285 IPR003439 ABC transporter-like AU28_RS09285 IPR003593 AAA+ ATPase domain AU28_RS09285 IPR017871 ABC transporter, conserved site AU28_RS09285 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS09290 IPR003439 ABC transporter-like AU28_RS09290 IPR003593 AAA+ ATPase domain AU28_RS09290 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS09295 IPR000515 MetI-like domain AU28_RS09300 IPR000515 MetI-like domain AU28_RS09305 IPR000914 Bacterial extracellular solute-binding protein, family 5 AU28_RS09305 IPR030678 AU28_RS09305 AU28_RS09310 IPR025113 TRL-like protein family AU28_RS09315 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AU28_RS09315 IPR016174 Di-haem cytochrome, transmembrane AU28_RS09320 IPR011040 Sialidases AU28_RS09330 IPR002068 Alpha crystallin/Hsp20 domain AU28_RS09330 IPR008978 HSP20-like chaperone AU28_RS09330 IPR031107 AU28_RS09330 AU28_RS09355 IPR018660 C-type lysozyme, inhibitor AU28_RS09370 IPR000758 Virulence-related outer membrane protein AU28_RS09370 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS09390 IPR002059 Cold-shock protein, DNA-binding AU28_RS09390 IPR011129 Cold shock protein AU28_RS09390 IPR012156 Cold shock, CspA AU28_RS09390 IPR012340 Nucleic acid-binding, OB-fold AU28_RS09390 IPR019844 Cold-shock conserved site AU28_RS09395 IPR000772 Ricin B lectin domain AU28_RS09400 IPR010391 DNA damage-inducible protein DinI-like AU28_RS09415 IPR022074 Protein of unknown function DUF3626 AU28_RS09420 IPR001804 Isocitrate and isopropylmalate dehydrogenases family AU28_RS09420 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic AU28_RS09420 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AU28_RS09420 IPR024084 Isopropylmalate dehydrogenase-like domain AU28_RS09425 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AU28_RS09425 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AU28_RS09425 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AU28_RS09425 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS09430 IPR017160 Uncharacterised conserved protein UCP037256 AU28_RS09435 IPR000086 NUDIX hydrolase domain AU28_RS09435 IPR015797 NUDIX hydrolase domain-like AU28_RS09435 IPR020084 NUDIX hydrolase, conserved site AU28_RS09435 IPR020476 NUDIX hydrolase AU28_RS09440 IPR004506 tRNA-specific 2-thiouridylase AU28_RS09440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS09440 IPR023382 Adenine nucleotide alpha hydrolase-like domains AU28_RS09445 IPR007451 Uncharacterised protein family UPF0274 AU28_RS09450 IPR000362 Fumarate lyase family AU28_RS09450 IPR004769 Adenylosuccinate lyase AU28_RS09450 IPR008948 L-Aspartase-like AU28_RS09450 IPR013539 Adenylosuccinate lyase PurB, C-terminal AU28_RS09450 IPR020557 Fumarate lyase, conserved site AU28_RS09450 IPR022761 Fumarate lyase, N-terminal AU28_RS09450 IPR024083 Fumarase/histidase, N-terminal AU28_RS09455 IPR001789 Signal transduction response regulator, receiver domain AU28_RS09455 IPR001867 Signal transduction response regulator, C-terminal AU28_RS09455 IPR011006 CheY-like superfamily AU28_RS09455 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS09460 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS09460 IPR003660 HAMP linker domain AU28_RS09460 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS09460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS09460 IPR015014 PhoQ Sensor AU28_RS09465 IPR003347 JmjC domain AU28_RS09470 IPR011990 Tetratricopeptide-like helical domain AU28_RS09475 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AU28_RS09475 IPR002933 Peptidase M20 AU28_RS09475 IPR010161 Peptidase M20B, tripeptide aminopeptidase AU28_RS09475 IPR011650 Peptidase M20, dimerisation domain AU28_RS09480 IPR003439 ABC transporter-like AU28_RS09480 IPR003593 AAA+ ATPase domain AU28_RS09480 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AU28_RS09480 IPR008995 Molybdate/tungstate binding, C-terminal AU28_RS09480 IPR013611 Transport-associated OB, type 2 AU28_RS09480 IPR017871 ABC transporter, conserved site AU28_RS09480 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS09485 IPR000515 MetI-like domain AU28_RS09490 IPR010637 Sif AU28_RS09495 IPR000515 MetI-like domain AU28_RS09500 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein AU28_RS09505 IPR003000 Sirtuin family AU28_RS09505 IPR026591 Sirtuin family, catalytic core small domain AU28_RS09505 IPR027546 Sirtuin, class III AU28_RS09505 IPR029035 DHS-like NAD/FAD-binding domain AU28_RS09510 IPR000600 ROK AU28_RS09510 IPR023505 N-acetyl-D-glucosamine kinase AU28_RS09515 IPR003838 Permease FtsX-like AU28_RS09515 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family AU28_RS09515 IPR011926 Lipoprotein releasing system, transmembrane protein LolE AU28_RS09515 IPR025857 MacB-like periplasmic core domain AU28_RS09520 IPR003439 ABC transporter-like AU28_RS09520 IPR003593 AAA+ ATPase domain AU28_RS09520 IPR011924 Lipoprotein releasing system, ATP-binding protein AU28_RS09520 IPR017871 ABC transporter, conserved site AU28_RS09520 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS09525 IPR003838 Permease FtsX-like AU28_RS09525 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family AU28_RS09525 IPR025857 MacB-like periplasmic core domain AU28_RS09530 IPR001650 Helicase, C-terminal AU28_RS09530 IPR003711 CarD-like/TRCF domain AU28_RS09530 IPR004576 Transcription-repair coupling factor AU28_RS09530 IPR005118 Transcription-repair-coupling factor, C-terminal domain AU28_RS09530 IPR011545 DEAD/DEAH box helicase domain AU28_RS09530 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS09530 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS09535 IPR005490 L,D-transpeptidase catalytic domain AU28_RS09535 IPR018392 LysM domain AU28_RS09540 IPR010854 Domain of unknown function DUF1471 AU28_RS09540 IPR025543 Dodecin-like AU28_RS09545 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS09545 IPR009057 Homeodomain-like AU28_RS09545 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS09545 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS09550 IPR008816 Glycine zipper 2TM domain AU28_RS09555 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS09560 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AU28_RS09560 IPR022987 Uncharacterised protein family UPF0227 AU28_RS09560 IPR029058 Alpha/Beta hydrolase fold AU28_RS09565 IPR001764 Glycoside hydrolase, family 3, N-terminal AU28_RS09565 IPR017853 Glycoside hydrolase, superfamily AU28_RS09565 IPR019800 Glycoside hydrolase, family 3, active site AU28_RS09565 IPR022956 Beta-hexosaminidase, bacterial AU28_RS09570 IPR002575 Aminoglycoside phosphotransferase AU28_RS09570 IPR011009 Protein kinase-like domain AU28_RS09570 IPR014093 Thiamine kinase AU28_RS09575 IPR014094 Penicillin-binding protein activator LpoB AU28_RS09580 IPR010824 Protein of unknown function DUF1425 AU28_RS09585 IPR001310 Histidine triad (HIT) protein AU28_RS09585 IPR011146 HIT-like domain AU28_RS09585 IPR019808 Histidine triad, conserved site AU28_RS09590 IPR000531 TonB-dependent receptor, beta-barrel AU28_RS09590 IPR010105 TonB-dependent siderophore receptor AU28_RS09590 IPR010916 TonB box, conserved site AU28_RS09590 IPR010917 TonB-dependent receptor, conserved site AU28_RS09590 IPR012910 TonB-dependent receptor, plug AU28_RS09595 IPR001996 Phosphotransferase system, IIB component, type 1 AU28_RS09595 IPR003352 Phosphotransferase system, EIIC AU28_RS09595 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component AU28_RS09595 IPR011299 PTS system glucose-specific IIBC component AU28_RS09595 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AU28_RS09600 IPR001130 TatD family AU28_RS09600 IPR015991 Uncharacterised deoxyribonuclease TatD-type AU28_RS09600 IPR018228 Deoxyribonuclease, TatD-related, conserved site AU28_RS09600 IPR032466 AU28_RS09600 AU28_RS09605 IPR004622 DNA polymerase III, delta prime subunit AU28_RS09605 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AU28_RS09605 IPR015199 DNA polymerase III, delta subunit, C-terminal AU28_RS09605 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS09610 IPR018094 Thymidylate kinase AU28_RS09610 IPR018095 Thymidylate kinase, conserved site AU28_RS09610 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS09615 IPR003770 Uncharacterised protein family UPF0755, YceG-like AU28_RS09615 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain AU28_RS09620 IPR001544 Aminotransferase, class IV AU28_RS09620 IPR017824 Aminodeoxychorismate lyase, class IV AU28_RS09620 IPR018300 Aminotransferase, class IV, conserved site AU28_RS09625 IPR014030 Beta-ketoacyl synthase, N-terminal AU28_RS09625 IPR014031 Beta-ketoacyl synthase, C-terminal AU28_RS09625 IPR016039 Thiolase-like AU28_RS09625 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 AU28_RS09625 IPR018201 Beta-ketoacyl synthase, active site AU28_RS09625 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AU28_RS09630 IPR003231 Acyl carrier protein (ACP) AU28_RS09630 IPR006162 Phosphopantetheine attachment site AU28_RS09630 IPR009081 Acyl carrier protein-like AU28_RS09635 IPR002347 Glucose/ribitol dehydrogenase AU28_RS09635 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AU28_RS09635 IPR016040 NAD(P)-binding domain AU28_RS09635 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS09640 IPR001227 Acyl transferase domain AU28_RS09640 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type AU28_RS09640 IPR014043 Acyl transferase AU28_RS09640 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AU28_RS09640 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AU28_RS09640 IPR020801 Polyketide synthase, acyl transferase domain AU28_RS09640 IPR024925 Malonyl CoA-acyl carrier protein transacylase AU28_RS09645 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AU28_RS09645 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal AU28_RS09645 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AU28_RS09645 IPR016039 Thiolase-like AU28_RS09650 IPR003664 Fatty acid synthesis PlsX protein AU28_RS09650 IPR012281 Phospholipid biosynthesis protein, PlsX-like AU28_RS09650 IPR024084 Isopropylmalate dehydrogenase-like domain AU28_RS09655 IPR002677 Ribosomal protein L32p AU28_RS09655 IPR011332 Zinc-binding ribosomal protein AU28_RS09660 IPR003772 Protein of unknown function DUF177 AU28_RS09665 IPR003697 Maf-like protein AU28_RS09665 IPR029001 Inosine triphosphate pyrophosphatase-like AU28_RS09675 IPR021413 Protein of unknown function DUF3053 AU28_RS09680 IPR002942 RNA-binding S4 domain AU28_RS09680 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AU28_RS09680 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AU28_RS09680 IPR006225 Pseudouridine synthase, RluC/RluD AU28_RS09680 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS09685 IPR020371 Uncharacterised protein family YceQ AU28_RS09690 IPR003029 Ribosomal protein S1, RNA-binding domain AU28_RS09690 IPR004659 Ribonuclease E/G AU28_RS09690 IPR012340 Nucleic acid-binding, OB-fold AU28_RS09690 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AU28_RS09690 IPR021968 Polyribonucleotide phosphorylase C-terminal AU28_RS09690 IPR022967 RNA-binding domain, S1 AU28_RS09690 IPR028878 Ribonuclease E AU28_RS09695 IPR001029 Flagellin, D0/D1 domain AU28_RS09695 IPR013384 Flagellar hook-associated protein 3 AU28_RS09700 IPR001444 Flagellar basal body rod protein, N-terminal AU28_RS09700 IPR002371 Flagellar hook-associated protein, FlgK AU28_RS09700 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AU28_RS09700 IPR019776 Flagellar basal body rod protein, conserved site AU28_RS09705 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain AU28_RS09705 IPR013377 Flagellar rod assembly protein/muramidase FlgJ AU28_RS09705 IPR019301 Flagellar protein FlgJ, N-terminal AU28_RS09710 IPR001782 Flagellar P-ring protein AU28_RS09715 IPR000527 Flagellar L-ring protein AU28_RS09720 IPR001444 Flagellar basal body rod protein, N-terminal AU28_RS09720 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AU28_RS09720 IPR012834 Flagellar basal-body rod FlgG AU28_RS09720 IPR019776 Flagellar basal body rod protein, conserved site AU28_RS09720 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AU28_RS09725 IPR001444 Flagellar basal body rod protein, N-terminal AU28_RS09725 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AU28_RS09725 IPR019776 Flagellar basal body rod protein, conserved site AU28_RS09725 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AU28_RS09730 IPR001444 Flagellar basal body rod protein, N-terminal AU28_RS09730 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AU28_RS09730 IPR011491 Flagellar basal body FlaE AU28_RS09730 IPR019776 Flagellar basal body rod protein, conserved site AU28_RS09730 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AU28_RS09735 IPR005648 Flagellar hook capping protein AU28_RS09735 IPR025963 FlgD Tudor-like domain AU28_RS09735 IPR025965 FlgD Ig-like domain AU28_RS09740 IPR001444 Flagellar basal body rod protein, N-terminal AU28_RS09740 IPR006299 Flagellar basal-body rod protein FlgC AU28_RS09740 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AU28_RS09740 IPR019776 Flagellar basal body rod protein, conserved site AU28_RS09745 IPR001444 Flagellar basal body rod protein, N-terminal AU28_RS09745 IPR006300 Flagellar basal-body rod protein FlgB AU28_RS09745 IPR019776 Flagellar basal body rod protein, conserved site AU28_RS09750 IPR013974 SAF domain AU28_RS09750 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AU28_RS09755 IPR007412 Anti-sigma-28 factor, FlgM AU28_RS09755 IPR031316 AU28_RS09755 AU28_RS09760 IPR007809 FlgN-like domain AU28_RS09765 IPR004268 Flagellin assembly, membrane protein MviN AU28_RS09770 IPR000683 Oxidoreductase, N-terminal AU28_RS09770 IPR016040 NAD(P)-binding domain AU28_RS09775 IPR007432 Protein of unknown function DUF480 AU28_RS09775 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS09780 IPR000182 GNAT domain AU28_RS09780 IPR016181 Acyl-CoA N-acyltransferase AU28_RS09785 IPR011701 Major facilitator superfamily AU28_RS09785 IPR020846 Major facilitator superfamily domain AU28_RS09785 IPR022855 Multidrug resistance protein MdtH AU28_RS09790 IPR004045 Glutathione S-transferase, N-terminal AU28_RS09790 IPR007494 Glutaredoxin 2, C-terminal AU28_RS09790 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS09790 IPR011767 Glutaredoxin active site AU28_RS09790 IPR011901 Glutaredoxin, GrxB AU28_RS09790 IPR012336 Thioredoxin-like fold AU28_RS09795 IPR010835 Protein of unknown function DUF1439 AU28_RS09800 IPR002195 Dihydroorotase, conserved site AU28_RS09800 IPR004721 Dihydroorotase homodimeric type AU28_RS09800 IPR006680 Amidohydrolase 1 AU28_RS09800 IPR032466 AU28_RS09800 AU28_RS09805 IPR010391 DNA damage-inducible protein DinI-like AU28_RS09810 IPR025730 Biofilm regulator BssS AU28_RS09815 IPR006076 FAD dependent oxidoreductase AU28_RS09815 IPR023493 N-methyl-L-tryptophan oxidase MTOX AU28_RS09815 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS09820 IPR024494 Protein of unknown function DUF2770 AU28_RS09825 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AU28_RS09825 IPR016174 Di-haem cytochrome, transmembrane AU28_RS09830 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AU28_RS09830 IPR023480 Uncharacterised protein family UPF0312/YceI AU28_RS09835 IPR001763 Rhodanese-like domain AU28_RS09835 IPR020936 Uncharacterised protein family UPF0176 AU28_RS09835 IPR022111 Protein of unknown function DUF3650 AU28_RS09840 IPR004960 Bacterial lipid A biosynthesis acyltransferase AU28_RS09840 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AU28_RS09845 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG AU28_RS09845 IPR011701 Major facilitator superfamily AU28_RS09845 IPR020846 Major facilitator superfamily domain AU28_RS09845 IPR023692 Multidrug resistance protein MdtG AU28_RS09850 IPR025729 MsyB protein AU28_RS09855 IPR010780 Protein of unknown function DUF1375 AU28_RS09860 IPR001173 Glycosyltransferase 2-like AU28_RS09860 IPR023725 Glucan biosynthesis glucosyltransferase H AU28_RS09860 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS09865 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal AU28_RS09865 IPR011013 Galactose mutarotase-like domain AU28_RS09865 IPR013783 Immunoglobulin-like fold AU28_RS09865 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D AU28_RS09865 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup AU28_RS09865 IPR014756 Immunoglobulin E-set AU28_RS09865 IPR023704 Glucan biosynthesis protein G AU28_RS09870 IPR002656 Acyltransferase 3 AU28_RS09870 IPR023723 Glucan biosynthesis protein C AU28_RS09875 IPR001736 Phospholipase D/Transphosphatidylase AU28_RS09875 IPR025202 Phospholipase D-like domain AU28_RS09875 IPR030871 AU28_RS09875 AU28_RS09880 IPR002589 Macro domain AU28_RS09880 IPR024900 O-acetyl-ADP-ribose deacetylase AU28_RS09890 IPR014491 Curli production protein CsgC AU28_RS09895 IPR009742 Curlin associated AU28_RS09900 IPR009742 Curlin associated AU28_RS09905 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS09905 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS09905 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS09910 IPR018900 Curli assembly protein CsgE AU28_RS09915 IPR018893 Type VIII secretion system, CsgF AU28_RS09920 IPR005534 Curli production assembly/transport component CsgG AU28_RS09925 IPR009476 Protein of unknown function DUF1097 AU28_RS09930 IPR020945 DMSO/Nitrate reductase chaperone AU28_RS09930 IPR026269 Tat proofreading chaperone DmsD-type AU28_RS09935 IPR003141 Polymerase/histidinol phosphatase, N-terminal AU28_RS09935 IPR004013 PHP, C-terminal AU28_RS09935 IPR016195 Polymerase/histidinol phosphatase-like AU28_RS09935 IPR023710 Probable phosphatase YcdX AU28_RS09940 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AU28_RS09940 IPR016040 NAD(P)-binding domain AU28_RS09940 IPR023514 Glyoxylate/hydroxypyruvate reductase A AU28_RS09955 IPR002514 Transposase IS3/IS911family AU28_RS09955 IPR009057 Homeodomain-like AU28_RS09960 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal AU28_RS09960 IPR003346 Transposase, IS116/IS110/IS902 AU28_RS09980 IPR010384 MtfA family AU28_RS09980 IPR024079 Metallopeptidase, catalytic domain AU28_RS09990 IPR025166 Domain of unknown function DUF4102 AU28_RS10005 IPR002104 Integrase, catalytic AU28_RS10005 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS10005 IPR013762 Integrase-like, catalytic core AU28_RS10005 IPR023109 Integrase/recombinase, N-terminal AU28_RS10005 IPR025166 Domain of unknown function DUF4102 AU28_RS10025 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain AU28_RS10030 IPR011083 Phage tail collar domain AU28_RS10030 IPR012902 Prokaryotic N-terminal methylation site AU28_RS10035 IPR012902 Prokaryotic N-terminal methylation site AU28_RS10035 IPR014911 Type 4 secretion system, PilS, N-terminal AU28_RS10040 IPR009444 Conjugal transfer, TraD, alpha-type AU28_RS10045 IPR005053 MobA/MobL protein AU28_RS10050 IPR021352 Protein of unknown function DUF2971 AU28_RS10065 IPR031863 AU28_RS10065 AU28_RS10095 IPR008813 Plasmid replication protein, RepL AU28_RS10095 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS10105 IPR031864 AU28_RS10105 AU28_RS10110 IPR001801 Histone-like protein H-NS AU28_RS10110 IPR027444 Histone-like protein H-NS, C-terminal domain AU28_RS10110 IPR027454 Histone-like protein H-NS family, oligomerisation domain AU28_RS10135 IPR010260 Bacteriophage P4, Orf88 AU28_RS10150 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS10150 IPR023109 Integrase/recombinase, N-terminal AU28_RS10150 IPR024456 Integrase catalytic domain, putative AU28_RS10150 IPR024457 Putative integrase, N-terminal AU28_RS10155 IPR006597 Sel1-like AU28_RS10155 IPR011652 MORN variant AU28_RS10155 IPR011990 Tetratricopeptide-like helical domain AU28_RS10160 IPR011990 Tetratricopeptide-like helical domain AU28_RS10170 IPR000845 Nucleoside phosphorylase domain AU28_RS10170 IPR011271 AMP nucleosidase AU28_RS10170 IPR018017 Nucleoside phosphorylase AU28_RS10170 IPR018953 AMP nucleoside phosphorylase, N-terminal AU28_RS10180 IPR010862 Protein of unknown function DUF1493 AU28_RS10200 IPR002528 Multi antimicrobial extrusion protein AU28_RS10215 IPR005490 L,D-transpeptidase catalytic domain AU28_RS10220 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like AU28_RS10220 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic AU28_RS10220 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal AU28_RS10225 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase AU28_RS10230 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase AU28_RS10230 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS10235 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AU28_RS10235 IPR004459 Cobyric acid synthase CobQ AU28_RS10235 IPR011698 CobB/CobQ-like glutamine amidotransferase AU28_RS10235 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS10235 IPR029062 Class I glutamine amidotransferase-like AU28_RS10240 IPR003439 ABC transporter-like AU28_RS10240 IPR003593 AAA+ ATPase domain AU28_RS10240 IPR005876 Cobalt transport protein ATP-binding subunit AU28_RS10240 IPR017871 ABC transporter, conserved site AU28_RS10240 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS10245 IPR003339 ABC/ECF transporter, transmembrane component AU28_RS10245 IPR012809 ECF transporter, transmembrane component CbiQ/NikQ AU28_RS10250 IPR003705 Cobalt transport protein CbiN AU28_RS10255 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family AU28_RS10255 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM AU28_RS10260 IPR000878 Tetrapyrrole methylase AU28_RS10260 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AU28_RS10260 IPR006364 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core AU28_RS10260 IPR012382 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase AU28_RS10260 IPR014777 Tetrapyrrole methylase, subdomain 1 AU28_RS10265 IPR010388 Anaerobic cobalt chelatase AU28_RS10270 IPR003723 Precorrin-6x reductase AU28_RS10275 IPR000878 Tetrapyrrole methylase AU28_RS10275 IPR006363 Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core AU28_RS10275 IPR014776 Tetrapyrrole methylase, subdomain 2 AU28_RS10275 IPR014777 Tetrapyrrole methylase, subdomain 1 AU28_RS10280 IPR002750 CobE/GbiG C-terminal domain AU28_RS10280 IPR021744 Cobalamin synthesis G, N-terminal AU28_RS10280 IPR021745 Cobalamin biosynthesis central region AU28_RS10285 IPR000878 Tetrapyrrole methylase AU28_RS10285 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AU28_RS10285 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase AU28_RS10285 IPR014776 Tetrapyrrole methylase, subdomain 2 AU28_RS10285 IPR014777 Tetrapyrrole methylase, subdomain 1 AU28_RS10290 IPR007848 Methyltransferase small domain AU28_RS10290 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit AU28_RS10290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS10295 IPR000878 Tetrapyrrole methylase AU28_RS10295 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase AU28_RS10295 IPR014776 Tetrapyrrole methylase, subdomain 2 AU28_RS10295 IPR014777 Tetrapyrrole methylase, subdomain 1 AU28_RS10300 IPR002748 Cobalamin (vitamin B12) biosynthesis CbiD AU28_RS10305 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase AU28_RS10310 IPR004485 Cobalamin biosynthesis CobD/CbiB AU28_RS10315 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AU28_RS10315 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA AU28_RS10315 IPR011698 CobB/CobQ-like glutamine amidotransferase AU28_RS10315 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS10315 IPR029062 Class I glutamine amidotransferase-like AU28_RS10320 IPR009057 Homeodomain-like AU28_RS10320 IPR018060 DNA binding HTH domain, AraC-type AU28_RS10320 IPR018062 HTH domain AraC-type, conserved site AU28_RS10320 IPR018771 PocR domain AU28_RS10320 IPR020449 Transcription regulator HTH, AraC- type AU28_RS10325 IPR000425 Major intrinsic protein AU28_RS10325 IPR022357 Major intrinsic protein, conserved site AU28_RS10325 IPR023271 Aquaporin-like AU28_RS10330 IPR000249 Microcompartment protein, bacteria AU28_RS10330 IPR020808 Bacterial microcompartments protein, conserved site AU28_RS10335 IPR000249 Microcompartment protein, bacteria AU28_RS10335 IPR009193 Polyhedral organelle shell protein, EutL/PduB type AU28_RS10335 IPR030984 AU28_RS10335 AU28_RS10340 IPR003206 Diol/glycerol dehydratase, large subunit AU28_RS10340 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic AU28_RS10345 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor AU28_RS10345 IPR010254 B12-dependent dehydratases, beta subunit AU28_RS10345 IPR025541 Propanediol/glycerol dehydratase, medium subunit AU28_RS10350 IPR003207 Propanediol/glycerol dehydratase, small subunit AU28_RS10355 IPR009191 Diol/glycerol dehydratase reactivating factor, large subunit AU28_RS10355 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain AU28_RS10355 IPR030994 AU28_RS10355 AU28_RS10360 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor AU28_RS10360 IPR009192 Diol/glycerol dehydratase reactivating factor, small subunit AU28_RS10360 IPR010254 B12-dependent dehydratases, beta subunit AU28_RS10365 IPR000249 Microcompartment protein, bacteria AU28_RS10365 IPR020808 Bacterial microcompartments protein, conserved site AU28_RS10370 IPR000249 Microcompartment protein, bacteria AU28_RS10375 IPR008300 Propanediol utilisation protein AU28_RS10380 IPR030992 AU28_RS10380 AU28_RS10385 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AU28_RS10385 IPR023414 Ethanolamine utilization protein-like domain AU28_RS10390 IPR005624 Domain of unknown function DUF336 AU28_RS10390 IPR009221 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, bifunctional PduO AU28_RS10390 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like AU28_RS10390 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type AU28_RS10395 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related AU28_RS10395 IPR015590 Aldehyde dehydrogenase domain AU28_RS10395 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS10395 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS10395 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS10400 IPR001670 Alcohol dehydrogenase, iron-type AU28_RS10400 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AU28_RS10405 IPR009051 Alpha-helical ferredoxin AU28_RS10405 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit AU28_RS10405 IPR017054 Propanediol utilization protein, PduS, predicted AU28_RS10405 IPR019554 Soluble ligand binding domain AU28_RS10405 IPR026902 RnfC Barrel sandwich hybrid domain AU28_RS10410 IPR000249 Microcompartment protein, bacteria AU28_RS10410 IPR011238 Polyhedral organelle shell protein PduT AU28_RS10415 IPR000249 Microcompartment protein, bacteria AU28_RS10415 IPR009307 Ethanolamine utilisation EutS AU28_RS10420 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV AU28_RS10420 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS10425 IPR000890 Aliphatic acid kinase, short-chain AU28_RS10425 IPR004372 Acetate/Proprionate kinase AU28_RS10425 IPR023865 Aliphatic acid kinase, short-chain, conserved site AU28_RS10425 IPR024896 Propionate kinase PduW AU28_RS10430 IPR006204 GHMP kinase N-terminal domain AU28_RS10430 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related AU28_RS10430 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS10430 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS10435 IPR007458 Protein of unknown function DUF496 AU28_RS10440 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein AU28_RS10445 IPR010499 Bacterial transcription activator, effector binding AU28_RS10445 IPR011256 Regulatory factor, effector binding domain AU28_RS10445 IPR024911 DNA gyrase inhibitor GyrI AU28_RS10445 IPR029442 GyrI-like small molecule binding domain AU28_RS10450 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AU28_RS10450 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS10450 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AU28_RS10450 IPR015956 Penicillin-binding protein-associated AU28_RS10450 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AU28_RS10455 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AU28_RS10455 IPR016174 Di-haem cytochrome, transmembrane AU28_RS10460 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS10460 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS10465 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS10465 IPR006656 Molybdopterin oxidoreductase AU28_RS10465 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS10465 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS10465 IPR009010 Aspartate decarboxylase-like domain AU28_RS10465 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AU28_RS10465 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AU28_RS10470 IPR001646 Pentapeptide repeat AU28_RS10470 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain AU28_RS10470 IPR025726 E3 ubiquitin ligase SopA-like central domain AU28_RS10475 IPR012337 Ribonuclease H-like domain AU28_RS10475 IPR013520 Exonuclease, RNase T/DNA polymerase III AU28_RS10475 IPR013620 Exonuclease C-terminal AU28_RS10475 IPR023607 Exodeoxyribonuclease I AU28_RS10480 IPR002293 Amino acid/polyamine transporter I AU28_RS10485 IPR000847 Transcription regulator HTH, LysR AU28_RS10485 IPR005119 LysR, substrate-binding AU28_RS10485 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS10490 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AU28_RS10490 IPR016040 NAD(P)-binding domain AU28_RS10495 IPR001348 ATP phosphoribosyltransferase HisG AU28_RS10495 IPR011322 Nitrogen regulatory PII-like, alpha/beta AU28_RS10495 IPR013115 Histidine biosynthesis HisG, C-terminal AU28_RS10495 IPR013820 ATP phosphoribosyltransferase, catalytic domain AU28_RS10495 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AU28_RS10495 IPR018198 ATP phosphoribosyltransferase, conserved site AU28_RS10495 IPR020621 ATP phosphoribosyltransferase HisG, long form AU28_RS10500 IPR001692 Histidinol dehydrogenase, conserved site AU28_RS10500 IPR012131 Histidinol dehydrogenase AU28_RS10500 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS10500 IPR022695 Histidinol dehydrogenase, monofunctional AU28_RS10505 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AU28_RS10505 IPR004839 Aminotransferase, class I/classII AU28_RS10505 IPR005861 Histidinol-phosphate aminotransferase family AU28_RS10505 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS10505 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS10505 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS10510 IPR000807 Imidazoleglycerol-phosphate dehydratase AU28_RS10510 IPR005954 Histidinol-phosphatase AU28_RS10510 IPR006543 Histidinol-phosphate phosphatase AU28_RS10510 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AU28_RS10510 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site AU28_RS10510 IPR020566 Histidine biosynthesis bifunctional protein HisB AU28_RS10510 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS10510 IPR023214 HAD-like domain AU28_RS10515 IPR010139 Imidazole glycerol phosphate synthase, subunit H AU28_RS10515 IPR017926 Glutamine amidotransferase AU28_RS10515 IPR029062 Class I glutamine amidotransferase-like AU28_RS10520 IPR006062 Histidine biosynthesis AU28_RS10520 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA AU28_RS10520 IPR011060 Ribulose-phosphate binding barrel AU28_RS10520 IPR013785 Aldolase-type TIM barrel AU28_RS10520 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase AU28_RS10525 IPR004651 Histidine biosynthesis, HisF AU28_RS10525 IPR006062 Histidine biosynthesis AU28_RS10525 IPR011060 Ribulose-phosphate binding barrel AU28_RS10525 IPR013785 Aldolase-type TIM barrel AU28_RS10530 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AU28_RS10530 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase AU28_RS10530 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like AU28_RS10530 IPR023019 Histidine biosynthesis bifunctional protein HisIE AU28_RS10535 IPR003856 Lipopolysaccharide biosynthesis AU28_RS10540 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AU28_RS10540 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS10540 IPR013328 Dehydrogenase, multihelical AU28_RS10540 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AU28_RS10540 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AU28_RS10540 IPR016040 NAD(P)-binding domain AU28_RS10540 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AU28_RS10540 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AU28_RS10545 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating AU28_RS10545 IPR006114 6-phosphogluconate dehydrogenase, C-terminal AU28_RS10545 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AU28_RS10545 IPR006183 AU28_RS10545 AU28_RS10545 IPR006184 6-phosphogluconate-binding site AU28_RS10545 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS10545 IPR012284 Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension AU28_RS10545 IPR013328 Dehydrogenase, multihelical AU28_RS10545 IPR016040 NAD(P)-binding domain AU28_RS10550 IPR003362 Bacterial sugar transferase AU28_RS10550 IPR016040 NAD(P)-binding domain AU28_RS10550 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP AU28_RS10550 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AU28_RS10555 IPR005843 Alpha-D-phosphohexomutase, C-terminal AU28_RS10555 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AU28_RS10555 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AU28_RS10555 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AU28_RS10555 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AU28_RS10555 IPR016066 Alpha-D-phosphohexomutase, conserved site AU28_RS10560 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal AU28_RS10560 IPR005835 Nucleotidyl transferase AU28_RS10560 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AU28_RS10560 IPR011051 RmlC-like cupin domain AU28_RS10560 IPR014710 RmlC-like jelly roll fold AU28_RS10560 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS10565 IPR001173 Glycosyltransferase 2-like AU28_RS10565 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS10570 IPR001296 Glycosyl transferase, family 1 AU28_RS10570 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AU28_RS10575 IPR001173 Glycosyltransferase 2-like AU28_RS10575 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS10585 IPR016040 NAD(P)-binding domain AU28_RS10590 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AU28_RS10590 IPR016040 NAD(P)-binding domain AU28_RS10595 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AU28_RS10595 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS10595 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS10595 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS10600 IPR013445 CDP-glucose 4,6-dehydratase AU28_RS10600 IPR016040 NAD(P)-binding domain AU28_RS10605 IPR005835 Nucleotidyl transferase AU28_RS10605 IPR013446 Glucose-1-phosphate cytidylyltransferase AU28_RS10605 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS10610 IPR001041 2Fe-2S ferredoxin-type domain AU28_RS10610 IPR001221 Phenol hydroxylase reductase AU28_RS10610 IPR001433 Oxidoreductase FAD/NAD(P)-binding AU28_RS10610 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AU28_RS10610 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AU28_RS10610 IPR008333 Oxidoreductase, FAD-binding domain AU28_RS10610 IPR012675 Beta-grasp domain AU28_RS10610 IPR017938 Riboflavin synthase-like beta-barrel AU28_RS10615 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AU28_RS10615 IPR011051 RmlC-like cupin domain AU28_RS10615 IPR014710 RmlC-like jelly roll fold AU28_RS10620 IPR005835 Nucleotidyl transferase AU28_RS10620 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form AU28_RS10620 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS10625 IPR005913 dTDP-4-dehydrorhamnose reductase AU28_RS10625 IPR016040 NAD(P)-binding domain AU28_RS10625 IPR029903 AU28_RS10625 AU28_RS10630 IPR005888 dTDP-glucose 4,6-dehydratase AU28_RS10630 IPR016040 NAD(P)-binding domain AU28_RS10635 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit AU28_RS10635 IPR005835 Nucleotidyl transferase AU28_RS10635 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS10640 IPR011050 Pectin lyase fold/virulence factor AU28_RS10640 IPR012334 Pectin lyase fold AU28_RS10640 IPR023882 Colanic acid biosynthesis WcaM AU28_RS10645 IPR001296 Glycosyl transferase, family 1 AU28_RS10645 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL AU28_RS10645 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AU28_RS10650 IPR007345 Polysaccharide pyruvyl transferase AU28_RS10650 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK AU28_RS10660 IPR003362 Bacterial sugar transferase AU28_RS10660 IPR016040 NAD(P)-binding domain AU28_RS10660 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ AU28_RS10660 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AU28_RS10665 IPR005841 Alpha-D-phosphohexomutase superfamily AU28_RS10665 IPR005843 Alpha-D-phosphohexomutase, C-terminal AU28_RS10665 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AU28_RS10665 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AU28_RS10665 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AU28_RS10665 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AU28_RS10665 IPR016066 Alpha-D-phosphohexomutase, conserved site AU28_RS10670 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal AU28_RS10670 IPR005835 Nucleotidyl transferase AU28_RS10670 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AU28_RS10670 IPR011051 RmlC-like cupin domain AU28_RS10670 IPR014710 RmlC-like jelly roll fold AU28_RS10670 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS10675 IPR001296 Glycosyl transferase, family 1 AU28_RS10675 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI AU28_RS10675 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AU28_RS10680 IPR000086 NUDIX hydrolase domain AU28_RS10680 IPR015797 NUDIX hydrolase domain-like AU28_RS10680 IPR020084 NUDIX hydrolase, conserved site AU28_RS10680 IPR028613 GDP-mannose mannosyl hydrolase Gmm AU28_RS10685 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AU28_RS10685 IPR016040 NAD(P)-binding domain AU28_RS10685 IPR028614 GDP-L-fucose synthase AU28_RS10690 IPR006368 GDP-mannose 4,6-dehydratase AU28_RS10690 IPR016040 NAD(P)-binding domain AU28_RS10695 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS10695 IPR011004 Trimeric LpxA-like AU28_RS10695 IPR018357 Hexapeptide transferase, conserved site AU28_RS10695 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF AU28_RS10700 IPR001173 Glycosyltransferase 2-like AU28_RS10700 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE AU28_RS10700 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS10705 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD AU28_RS10710 IPR023916 Colanic acid biosynthesis, glycosyl transferase, WcaC AU28_RS10710 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AU28_RS10715 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS10715 IPR005881 Serine O-acetyltransferase AU28_RS10715 IPR011004 Trimeric LpxA-like AU28_RS10715 IPR018357 Hexapeptide transferase, conserved site AU28_RS10715 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB AU28_RS10720 IPR001173 Glycosyltransferase 2-like AU28_RS10720 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA AU28_RS10720 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS10725 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AU28_RS10725 IPR003856 Lipopolysaccharide biosynthesis AU28_RS10725 IPR005702 Exopolysaccharide synthesis protein AU28_RS10725 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS10725 IPR032807 AU28_RS10725 AU28_RS10730 IPR017867 Protein-tyrosine phosphatase, low molecular weight AU28_RS10730 IPR023485 Phosphotyrosine protein phosphatase I superfamily AU28_RS10735 IPR003715 Polysaccharide export protein AU28_RS10735 IPR019554 Soluble ligand binding domain AU28_RS10740 IPR000644 CBS domain AU28_RS10740 IPR005170 Transporter-associated domain AU28_RS10740 IPR005496 Integral membrane protein TerC AU28_RS10740 IPR016166 FAD-binding, type 2 AU28_RS10740 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AU28_RS10745 IPR007844 AsmA AU28_RS10750 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase AU28_RS10750 IPR011962 Deoxycytidine triphosphate deaminase AU28_RS10750 IPR029054 dUTPase-like AU28_RS10755 IPR000764 Uridine kinase like AU28_RS10755 IPR006083 Phosphoribulokinase/uridine kinase AU28_RS10755 IPR026008 Uridine kinase AU28_RS10755 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS10760 IPR000014 PAS domain AU28_RS10760 IPR000160 GGDEF domain AU28_RS10760 IPR001610 PAC motif AU28_RS10760 IPR001633 EAL domain AU28_RS10760 IPR007895 MASE1 AU28_RS10760 IPR013655 PAS fold-3 AU28_RS10760 IPR013656 PAS fold-4 AU28_RS10760 IPR029787 Nucleotide cyclase AU28_RS10765 IPR000035 Alkylbase DNA glycosidase, conserved site AU28_RS10765 IPR003265 HhH-GPD domain AU28_RS10765 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AU28_RS10765 IPR011257 DNA glycosylase AU28_RS10765 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AU28_RS10770 IPR013126 Heat shock protein 70 family AU28_RS10770 IPR018181 Heat shock protein 70, conserved site AU28_RS10775 IPR006143 RND efflux pump, membrane fusion protein AU28_RS10775 IPR022824 Multidrug resistance protein MdtA AU28_RS10780 IPR001036 Acriflavin resistance protein AU28_RS10780 IPR022831 Multidrug resistance protein MdtB AU28_RS10780 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AU28_RS10785 IPR001036 Acriflavin resistance protein AU28_RS10785 IPR023931 Multidrug resistance protein MdtC AU28_RS10785 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AU28_RS10790 IPR011701 Major facilitator superfamily AU28_RS10790 IPR020846 Major facilitator superfamily domain AU28_RS10790 IPR023721 Multidrug resistance protein MdtD, putative AU28_RS10795 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS10795 IPR003660 HAMP linker domain AU28_RS10795 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS10795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS10800 IPR001789 Signal transduction response regulator, receiver domain AU28_RS10800 IPR001867 Signal transduction response regulator, C-terminal AU28_RS10800 IPR011006 CheY-like superfamily AU28_RS10800 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS10800 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS10810 IPR009677 Protein of unknown function DUF1266 AU28_RS10815 IPR025115 Domain of unknown function DUF4034 AU28_RS10820 IPR001539 Peptidase U32 AU28_RS10820 IPR032525 AU28_RS10820 AU28_RS10825 IPR010261 Tir chaperone protein (CesT) family AU28_RS10840 IPR001206 Diacylglycerol kinase, catalytic domain AU28_RS10840 IPR005218 Diacylglycerol/lipid kinase AU28_RS10840 IPR016064 ATP-NAD kinase-like domain AU28_RS10840 IPR022433 Lipid kinase YegS AU28_RS10845 IPR002915 DeoC/FbaB/ lacD aldolase AU28_RS10845 IPR013785 Aldolase-type TIM barrel AU28_RS10850 IPR004740 Nucleoside:H+ symporter AU28_RS10850 IPR020846 Major facilitator superfamily domain AU28_RS10855 IPR005502 ADP-ribosylation/Crystallin J1 AU28_RS10860 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS10860 IPR011611 Carbohydrate kinase PfkB AU28_RS10860 IPR029056 Ribokinase-like AU28_RS10865 IPR000524 Transcription regulator HTH, GntR AU28_RS10865 IPR011663 UbiC transcription regulator-associated AU28_RS10865 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS10865 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AU28_RS10870 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AU28_RS10870 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AU28_RS10870 IPR029056 Ribokinase-like AU28_RS10875 IPR000417 Hydroxyethylthiazole kinase AU28_RS10875 IPR029056 Ribokinase-like AU28_RS10880 IPR024572 Protein of unknown function DUF3315 AU28_RS10885 IPR000259 Fimbrial-type adhesion domain AU28_RS10885 IPR008966 Adhesion domain AU28_RS10885 IPR016959 Uncharacterised conserved protein UCP030811 AU28_RS10890 IPR000015 Outer membrane usher protein AU28_RS10890 IPR025885 PapC, N-terminal domain AU28_RS10890 IPR025949 PapC-like, C-terminal domain AU28_RS10895 IPR001829 Pili assembly chaperone, bacterial AU28_RS10895 IPR008962 PapD-like AU28_RS10895 IPR016147 PapD, N-terminal, bacterial AU28_RS10895 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS10895 IPR018046 Pili assembly chaperone, conserved site AU28_RS10900 IPR000259 Fimbrial-type adhesion domain AU28_RS10900 IPR008966 Adhesion domain AU28_RS10905 IPR020386 Uncharacterised protein family YehE AU28_RS10910 IPR000808 Mrp, conserved site AU28_RS10910 IPR019591 Mrp/NBP35 ATP-binding protein AU28_RS10910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS10915 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AU28_RS10915 IPR002547 tRNA-binding domain AU28_RS10915 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal AU28_RS10915 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AU28_RS10915 IPR012340 Nucleic acid-binding, OB-fold AU28_RS10915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS10915 IPR014758 Methionyl-tRNA synthetase AU28_RS10915 IPR015413 Methionyl/Leucyl tRNA synthetase AU28_RS10915 IPR023458 Methionine-tRNA ligase, type 1 AU28_RS10915 IPR029038 Methionyl-tRNA synthetase, Zn-domain AU28_RS10920 IPR009736 Protein of unknown function DUF1307 AU28_RS10925 IPR009736 Protein of unknown function DUF1307 AU28_RS10930 IPR009921 Domain of unknown function DUF1456 AU28_RS10935 IPR001789 Signal transduction response regulator, receiver domain AU28_RS10935 IPR007492 LytTR DNA-binding domain AU28_RS10935 IPR011006 CheY-like superfamily AU28_RS10940 IPR003018 GAF domain AU28_RS10940 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS10940 IPR010559 Signal transduction histidine kinase, internal region AU28_RS10940 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AU28_RS10940 IPR029016 GAF domain-like AU28_RS10945 IPR000551 MerR-type HTH domain AU28_RS10945 IPR009061 DNA binding domain, putative AU28_RS10950 IPR020870 Uncharacterised protein family UPF0387, membrane AU28_RS10955 IPR000515 MetI-like domain AU28_RS10960 IPR003439 ABC transporter-like AU28_RS10960 IPR003593 AAA+ ATPase domain AU28_RS10960 IPR017871 ABC transporter, conserved site AU28_RS10960 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS10965 IPR000515 MetI-like domain AU28_RS10970 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain AU28_RS10975 IPR001764 Glycoside hydrolase, family 3, N-terminal AU28_RS10975 IPR002772 Glycoside hydrolase family 3 C-terminal domain AU28_RS10975 IPR017853 Glycoside hydrolase, superfamily AU28_RS10975 IPR019800 Glycoside hydrolase, family 3, active site AU28_RS10975 IPR026891 Fibronectin type III-like domain AU28_RS10975 IPR026892 Glycoside hydrolase family 3 AU28_RS10980 IPR006094 FAD linked oxidase, N-terminal AU28_RS10980 IPR012256 D-lactate dehydrogenase AU28_RS10980 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal AU28_RS10980 IPR016164 FAD-linked oxidase-like, C-terminal AU28_RS10980 IPR016166 FAD-binding, type 2 AU28_RS10980 IPR016167 FAD-binding, type 2, subdomain 1 AU28_RS10980 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AU28_RS10980 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 AU28_RS10980 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 AU28_RS10985 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AU28_RS10985 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS10985 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AU28_RS10990 IPR009698 Protein of unknown function DUF1282 AU28_RS10995 IPR032816 AU28_RS10995 AU28_RS10995 IPR032818 AU28_RS10995 AU28_RS11000 IPR002347 Glucose/ribitol dehydrogenase AU28_RS11000 IPR016040 NAD(P)-binding domain AU28_RS11000 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS11005 IPR003423 Outer membrane efflux protein AU28_RS11005 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AU28_RS11010 IPR001269 tRNA-dihydrouridine synthase AU28_RS11010 IPR013785 Aldolase-type TIM barrel AU28_RS11010 IPR018517 tRNA-dihydrouridine synthase, conserved site AU28_RS11010 IPR032886 AU28_RS11010 AU28_RS11015 IPR002938 Monooxygenase, FAD-binding AU28_RS11015 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS11020 IPR004045 Glutathione S-transferase, N-terminal AU28_RS11020 IPR004046 Glutathione S-transferase, C-terminal AU28_RS11020 IPR005955 Maleylacetoacetate isomerase AU28_RS11020 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS11020 IPR012336 Thioredoxin-like fold AU28_RS11025 IPR011234 Fumarylacetoacetase, C-terminal-related AU28_RS11030 IPR011051 RmlC-like cupin domain AU28_RS11030 IPR011960 Gentisate 1,2-dioxygenase AU28_RS11030 IPR013096 Cupin 2, conserved barrel AU28_RS11030 IPR014710 RmlC-like jelly roll fold AU28_RS11035 IPR011701 Major facilitator superfamily AU28_RS11035 IPR020846 Major facilitator superfamily domain AU28_RS11040 IPR000847 Transcription regulator HTH, LysR AU28_RS11040 IPR005119 LysR, substrate-binding AU28_RS11040 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS11045 IPR005538 LrgA/CidA family AU28_RS11045 IPR022957 Uncharacterised protein family UPF0299 AU28_RS11050 IPR005261 Conserved hypothetical protein CHP00659 AU28_RS11050 IPR007300 CidB/LrgB family AU28_RS11055 IPR002125 CMP/dCMP deaminase, zinc-binding AU28_RS11055 IPR006263 Cytidine deaminase, homodimeric AU28_RS11055 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain AU28_RS11055 IPR016192 APOBEC/CMP deaminase, zinc-binding AU28_RS11055 IPR016193 Cytidine deaminase-like AU28_RS11055 IPR020797 Cytidine deaminase, bacteria AU28_RS11060 IPR003848 Domain of unknown function DUF218 AU28_RS11060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS11060 IPR023604 Uncharacterised protein family SanA AU28_RS11065 IPR020155 Uncharacterised protein family YeiS AU28_RS11070 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II AU28_RS11070 IPR009051 Alpha-helical ferredoxin AU28_RS11070 IPR016040 NAD(P)-binding domain AU28_RS11070 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS11070 IPR028261 Dihydroprymidine dehydrogenase domain II AU28_RS11075 IPR005720 Dihydroorotate dehydrogenase domain AU28_RS11075 IPR013785 Aldolase-type TIM barrel AU28_RS11075 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS11080 IPR001851 ABC transporter, permease AU28_RS11080 IPR030158 AU28_RS11080 AU28_RS11085 IPR003439 ABC transporter-like AU28_RS11085 IPR003593 AAA+ ATPase domain AU28_RS11085 IPR017871 ABC transporter, conserved site AU28_RS11085 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS11090 IPR025997 Periplasmic binding protein domain AU28_RS11090 IPR028082 Periplasmic binding protein-like I AU28_RS11095 IPR000843 Transcription regulator HTH, LacI AU28_RS11095 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS11095 IPR028082 Periplasmic binding protein-like I AU28_RS11100 IPR007349 Domain of unknown function DUF418 AU28_RS11105 IPR001474 GTP cyclohydrolase I AU28_RS11105 IPR018234 GTP cyclohydrolase I, conserved site AU28_RS11105 IPR020602 GTP cyclohydrolase I domain AU28_RS11110 IPR000801 Putative esterase AU28_RS11110 IPR014186 S-formylglutathione hydrolase AU28_RS11110 IPR029058 Alpha/Beta hydrolase fold AU28_RS11115 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS11115 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS11120 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AU28_RS11120 IPR005130 Serine dehydratase-like, alpha subunit AU28_RS11120 IPR005131 Serine dehydratase beta chain AU28_RS11120 IPR029009 Allosteric substrate binding domain AU28_RS11125 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like AU28_RS11125 IPR023190 Phosphoserine phosphatase, domain 2 AU28_RS11125 IPR023214 HAD-like domain AU28_RS11130 IPR000849 Sugar phosphate transporter AU28_RS11130 IPR011701 Major facilitator superfamily AU28_RS11130 IPR020846 Major facilitator superfamily domain AU28_RS11135 IPR000531 TonB-dependent receptor, beta-barrel AU28_RS11135 IPR010916 TonB box, conserved site AU28_RS11135 IPR010917 TonB-dependent receptor, conserved site AU28_RS11135 IPR012910 TonB-dependent receptor, plug AU28_RS11140 IPR002293 Amino acid/polyamine transporter I AU28_RS11140 IPR004840 Amino acid permease, conserved site AU28_RS11140 IPR004841 Amino acid permease/ SLC12A domain AU28_RS11145 IPR000847 Transcription regulator HTH, LysR AU28_RS11145 IPR005119 LysR, substrate-binding AU28_RS11145 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS11150 IPR004630 Uncharacterised protein family UPF0324, bacteria AU28_RS11150 IPR018383 Uncharacterised protein family UPF0324, prokaryote AU28_RS11155 IPR001719 AP endonuclease 2 AU28_RS11155 IPR013022 Xylose isomerase-like, TIM barrel domain AU28_RS11155 IPR018246 AP endonuclease 2, zinc binding site AU28_RS11160 IPR003352 Phosphotransferase system, EIIC AU28_RS11160 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AU28_RS11160 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS11160 IPR006327 Phosphotransferase system, fructose IIC component AU28_RS11165 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS11165 IPR011611 Carbohydrate kinase PfkB AU28_RS11165 IPR017583 Tagatose/fructose phosphokinase AU28_RS11165 IPR022463 Fructose 1-phosphate kinase AU28_RS11165 IPR029056 Ribokinase-like AU28_RS11170 IPR000032 Phosphocarrier HPr protein-like AU28_RS11170 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AU28_RS11170 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AU28_RS11170 IPR002178 PTS EIIA type-2 domain AU28_RS11170 IPR016152 Phosphotransferase/anion transporter AU28_RS11175 IPR004750 Sugar efflux AU28_RS11175 IPR011701 Major facilitator superfamily AU28_RS11175 IPR020846 Major facilitator superfamily domain AU28_RS11180 IPR032807 AU28_RS11180 AU28_RS11190 IPR005358 Putative zinc- or iron-chelating domain containing protein AU28_RS11195 IPR001059 Translation elongation factor P/YeiP, central AU28_RS11195 IPR008991 Translation protein SH3-like domain AU28_RS11195 IPR011897 Translation elongation factor P-like, YeiP AU28_RS11195 IPR012340 Nucleic acid-binding, OB-fold AU28_RS11195 IPR013185 Translation elongation factor, KOW-like AU28_RS11195 IPR013852 Translation elongation factor P/YeiP, conserved site AU28_RS11195 IPR014722 Ribosomal protein L2 domain 2 AU28_RS11195 IPR015365 Elongation factor P, C-terminal AU28_RS11195 IPR020599 Translation elongation factor P/YeiP AU28_RS11200 IPR003495 CobW/HypB/UreG domain AU28_RS11200 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AU28_RS11200 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS11205 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AU28_RS11205 IPR032908 AU28_RS11205 AU28_RS11210 IPR000064 Endopeptidase, NLPC/P60 domain AU28_RS11215 IPR001633 EAL domain AU28_RS11215 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AU28_RS11220 IPR000914 Bacterial extracellular solute-binding protein, family 5 AU28_RS11220 IPR030678 AU28_RS11220 AU28_RS11225 IPR000515 MetI-like domain AU28_RS11230 IPR000515 MetI-like domain AU28_RS11230 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AU28_RS11235 IPR003439 ABC transporter-like AU28_RS11235 IPR003593 AAA+ ATPase domain AU28_RS11235 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AU28_RS11235 IPR017871 ABC transporter, conserved site AU28_RS11235 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS11240 IPR020489 Uncharacterised protein family YejG AU28_RS11250 IPR004734 Multidrug resistance protein AU28_RS11250 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AU28_RS11250 IPR011701 Major facilitator superfamily AU28_RS11250 IPR020846 Major facilitator superfamily domain AU28_RS11255 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AU28_RS11255 IPR002942 RNA-binding S4 domain AU28_RS11255 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AU28_RS11255 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AU28_RS11255 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS11260 IPR001650 Helicase, C-terminal AU28_RS11260 IPR006935 Helicase/UvrB domain AU28_RS11260 IPR011332 Zinc-binding ribosomal protein AU28_RS11260 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS11260 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS11265 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain AU28_RS11265 IPR020055 Ribosomal protein L25, short-form AU28_RS11265 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain AU28_RS11265 IPR029751 Ribosomal protein L25 AU28_RS11275 IPR007358 Nucleoid-associated protein NdpA AU28_RS11280 IPR009857 Uncharacterised protein family UPF0352 AU28_RS11280 IPR023202 YejL-like domain AU28_RS11285 IPR000917 Sulfatase AU28_RS11285 IPR012159 Membrane sulfatase, HI0842-related AU28_RS11285 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS11285 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS11285 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain AU28_RS11295 IPR003591 Leucine-rich repeat, typical subtype AU28_RS11295 IPR029487 Novel E3 ligase domain AU28_RS11295 IPR032674 AU28_RS11295 AU28_RS11295 IPR032675 AU28_RS11295 AU28_RS11315 IPR010391 DNA damage-inducible protein DinI-like AU28_RS11320 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS11320 IPR018550 Lipid A 3-O-deacylase-related AU28_RS11325 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS11325 IPR001789 Signal transduction response regulator, receiver domain AU28_RS11325 IPR011006 CheY-like superfamily AU28_RS11325 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS11325 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS11330 IPR005616 Cytochrome C biogenesis protein CcmH AU28_RS11330 IPR011990 Tetratricopeptide-like helical domain AU28_RS11335 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AU28_RS11335 IPR012336 Thioredoxin-like fold AU28_RS11335 IPR013740 Redoxin AU28_RS11335 IPR017937 Thioredoxin, conserved site AU28_RS11340 IPR002541 Cytochrome c assembly protein AU28_RS11340 IPR003567 Cytochrome c-type biogenesis protein AU28_RS11340 IPR003568 Cytochrome c-type biogenesis protein CcmF AU28_RS11340 IPR032523 AU28_RS11340 AU28_RS11345 IPR004329 CcmE/CycJ protein AU28_RS11345 IPR012340 Nucleic acid-binding, OB-fold AU28_RS11350 IPR007078 Haem exporter protein D (CcmD) AU28_RS11355 IPR002541 Cytochrome c assembly protein AU28_RS11355 IPR003557 Cytochrome c-type biogenesis protein CcmC AU28_RS11360 IPR003544 Cytochrome c-type biogenesis protein CcmB AU28_RS11360 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AU28_RS11365 IPR003439 ABC transporter-like AU28_RS11365 IPR003593 AAA+ ATPase domain AU28_RS11365 IPR005895 ABC transporter, haem export, CcmA AU28_RS11365 IPR017871 ABC transporter, conserved site AU28_RS11365 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS11370 IPR005126 NapC/NirT cytochrome c, N-terminal AU28_RS11370 IPR011031 Multihaem cytochrome AU28_RS11370 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT AU28_RS11370 IPR024717 Denitrification system component NapC/NirT/NrfH AU28_RS11375 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AU28_RS11375 IPR011031 Multihaem cytochrome AU28_RS11375 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain AU28_RS11380 IPR011886 Ferredoxin-type protein, NapH/MauN family AU28_RS11380 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS11380 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS11385 IPR004494 MauM/NapG ferredoxin-type protein AU28_RS11385 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS11385 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS11390 IPR006656 Molybdopterin oxidoreductase AU28_RS11390 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS11390 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS11390 IPR009010 Aspartate decarboxylase-like domain AU28_RS11390 IPR010051 Periplasmic nitrate reductase, large subunit AU28_RS11390 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AU28_RS11390 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AU28_RS11395 IPR005623 Chaperone NapD, nitrate reductase assembly AU28_RS11400 IPR004496 Ferredoxin-type protein NapF AU28_RS11400 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS11400 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS11405 IPR005658 Proteinase inhibitor I11, ecotin AU28_RS11405 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria AU28_RS11405 IPR023189 Proteinase inhibitor I11, ecotin domain AU28_RS11405 IPR027438 Ecotin, C-terminal AU28_RS11410 IPR003439 ABC transporter-like AU28_RS11410 IPR003593 AAA+ ATPase domain AU28_RS11410 IPR005898 Cyclic peptide transporter AU28_RS11410 IPR011527 ABC transporter type 1, transmembrane domain AU28_RS11410 IPR017871 ABC transporter, conserved site AU28_RS11410 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS11415 IPR004574 Alkylated DNA repair protein AlkB AU28_RS11415 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AU28_RS11420 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AU28_RS11420 IPR004026 Ada DNA repair, metal-binding AU28_RS11420 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AU28_RS11420 IPR009057 Homeodomain-like AU28_RS11420 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS11420 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AU28_RS11420 IPR016221 Bifunctional regulatory protein Ada AU28_RS11420 IPR018060 DNA binding HTH domain, AraC-type AU28_RS11420 IPR018062 HTH domain AraC-type, conserved site AU28_RS11425 IPR003374 ApbE-like domain AU28_RS11425 IPR024932 Flavin transferase ApbE AU28_RS11430 IPR001702 Porin, Gram-negative type AU28_RS11430 IPR001897 Porin, gammaproteobacterial AU28_RS11430 IPR013793 Porin, Gram-negative type, conserved site AU28_RS11430 IPR023614 Porin domain AU28_RS11435 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS11435 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AU28_RS11435 IPR030861 AU28_RS11435 AU28_RS11435 IPR032306 AU28_RS11435 AU28_RS11440 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS11440 IPR001789 Signal transduction response regulator, receiver domain AU28_RS11440 IPR011006 CheY-like superfamily AU28_RS11440 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS11440 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS11440 IPR030864 AU28_RS11440 AU28_RS11445 IPR001789 Signal transduction response regulator, receiver domain AU28_RS11445 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS11445 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS11445 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS11445 IPR011006 CheY-like superfamily AU28_RS11445 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal AU28_RS11445 IPR030856 AU28_RS11445 AU28_RS11450 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AU28_RS11450 IPR005743 DNA gyrase, subunit A AU28_RS11450 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel AU28_RS11450 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain AU28_RS11450 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AU28_RS11450 IPR013760 DNA topoisomerase, type IIA-like domain AU28_RS11450 IPR024946 Arginine repressor C-terminal-like domain AU28_RS11455 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS11455 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AU28_RS11455 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS11455 IPR029017 Enolase N-terminal domain-like AU28_RS11455 IPR029065 Enolase C-terminal domain-like AU28_RS11460 IPR000849 Sugar phosphate transporter AU28_RS11460 IPR011701 Major facilitator superfamily AU28_RS11460 IPR020846 Major facilitator superfamily domain AU28_RS11465 IPR000524 Transcription regulator HTH, GntR AU28_RS11465 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS11465 IPR011711 GntR, C-terminal AU28_RS11465 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS11470 IPR010233 Ubiquinone biosynthesis O-methyltransferase AU28_RS11470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS11475 IPR000788 Ribonucleotide reductase large subunit, C-terminal AU28_RS11475 IPR005144 ATP-cone AU28_RS11475 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal AU28_RS11475 IPR013346 Ribonucleotide reductase, class I , alpha subunit AU28_RS11475 IPR013509 Ribonucleotide reductase large subunit, N-terminal AU28_RS11480 IPR000358 Ribonucleotide reductase small subunit AU28_RS11480 IPR009078 Ferritin-like superfamily AU28_RS11480 IPR012348 Ribonucleotide reductase-related AU28_RS11480 IPR030475 AU28_RS11480 AU28_RS11485 IPR001041 2Fe-2S ferredoxin-type domain AU28_RS11485 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AU28_RS11485 IPR012675 Beta-grasp domain AU28_RS11490 IPR011701 Major facilitator superfamily AU28_RS11490 IPR020846 Major facilitator superfamily domain AU28_RS11495 IPR000847 Transcription regulator HTH, LysR AU28_RS11495 IPR005119 LysR, substrate-binding AU28_RS11495 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS11495 IPR020093 Uncharacterised domain YfaH, C-terminal AU28_RS11500 IPR004129 Glycerophosphoryl diester phosphodiesterase AU28_RS11500 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain AU28_RS11500 IPR030395 AU28_RS11500 AU28_RS11505 IPR000849 Sugar phosphate transporter AU28_RS11505 IPR005267 Glycerol-3-phosphate transporter AU28_RS11505 IPR011701 Major facilitator superfamily AU28_RS11505 IPR020846 Major facilitator superfamily domain AU28_RS11505 IPR021159 Glycerate/sugar phosphate transporter, conserved site AU28_RS11510 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase AU28_RS11510 IPR006076 FAD dependent oxidoreductase AU28_RS11510 IPR007419 BFD-like [2Fe-2S]-binding domain AU28_RS11510 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit AU28_RS11510 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS11515 IPR003953 FAD binding domain AU28_RS11515 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit AU28_RS11515 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS11520 IPR004017 Cysteine-rich domain AU28_RS11520 IPR009051 Alpha-helical ferredoxin AU28_RS11520 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit AU28_RS11520 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS11520 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS11535 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AU28_RS11535 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS11535 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase AU28_RS11540 IPR011701 Major facilitator superfamily AU28_RS11540 IPR020846 Major facilitator superfamily domain AU28_RS11545 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS11545 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AU28_RS11545 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS11545 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AU28_RS11545 IPR023444 L-rhamnonate dehydratase AU28_RS11545 IPR029017 Enolase N-terminal domain-like AU28_RS11545 IPR029065 Enolase C-terminal domain-like AU28_RS11550 IPR005471 Transcription regulator IclR, N-terminal AU28_RS11550 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS11550 IPR014757 Transcription regulator IclR, C-terminal AU28_RS11550 IPR029016 GAF domain-like AU28_RS11555 IPR001453 Molybdopterin binding domain AU28_RS11555 IPR008135 Competence-induced protein CinA AU28_RS11555 IPR008136 CinA, C-terminal AU28_RS11560 IPR009998 YfaZ AU28_RS11560 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS11560 IPR023614 Porin domain AU28_RS11565 IPR000086 NUDIX hydrolase domain AU28_RS11565 IPR015797 NUDIX hydrolase domain-like AU28_RS11565 IPR020084 NUDIX hydrolase, conserved site AU28_RS11565 IPR020476 NUDIX hydrolase AU28_RS11565 IPR023781 Nucleoside triphosphatase NudI AU28_RS11570 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase AU28_RS11570 IPR013078 Histidine phosphatase superfamily, clade-1 AU28_RS11570 IPR029033 Histidine phosphatase superfamily AU28_RS11575 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AU28_RS11575 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS11575 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS11575 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS11575 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB AU28_RS11580 IPR001173 Glycosyltransferase 2-like AU28_RS11580 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase AU28_RS11580 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS11585 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AU28_RS11585 IPR002376 Formyl transferase, N-terminal AU28_RS11585 IPR005793 Formyl transferase, C-terminal AU28_RS11585 IPR011034 Formyl transferase, C-terminal-like AU28_RS11585 IPR016040 NAD(P)-binding domain AU28_RS11585 IPR021168 Bifunctional polymyxin resistance protein, ArnA AU28_RS11590 IPR002509 Polysaccharide deacetylase AU28_RS11590 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AU28_RS11590 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable AU28_RS11595 IPR003342 Glycosyl transferase, family 39 AU28_RS11595 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase AU28_RS11600 IPR000620 Drug/metabolite transporter AU28_RS11600 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE AU28_RS11605 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF AU28_RS11610 IPR020146 Signal transduction protein PmrD AU28_RS11615 IPR000873 AMP-dependent synthetase/ligase AU28_RS11615 IPR010192 2-succinylbenzoate--CoA ligase AU28_RS11615 IPR020845 AMP-binding, conserved site AU28_RS11615 IPR025110 AMP-binding enzyme C-terminal domain AU28_RS11620 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS11620 IPR010196 O-succinylbenzoic acid (OSB) synthetase AU28_RS11620 IPR010197 O-succinylbenzoate synthase, low GC Gram-positive bacteria-type AU28_RS11620 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS11620 IPR029017 Enolase N-terminal domain-like AU28_RS11620 IPR029065 Enolase C-terminal domain-like AU28_RS11625 IPR001753 Crotonase superfamily AU28_RS11625 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase AU28_RS11625 IPR014748 Crontonase, C-terminal AU28_RS11625 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AU28_RS11625 IPR029045 ClpP/crotonase-like domain AU28_RS11630 IPR000073 Alpha/beta hydrolase fold-1 AU28_RS11630 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase AU28_RS11630 IPR029058 Alpha/Beta hydrolase fold AU28_RS11635 IPR004433 Menaquinone biosynthesis protein MenD AU28_RS11635 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AU28_RS11635 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AU28_RS11635 IPR029061 Thiamin diphosphate-binding fold AU28_RS11635 IPR032264 AU28_RS11635 AU28_RS11640 IPR004561 Isochorismate synthase AU28_RS11640 IPR005801 ADC synthase AU28_RS11640 IPR015890 Chorismate binding, C-terminal AU28_RS11645 IPR010279 Protein of unknown function DUF883, ElaB AU28_RS11650 IPR000182 GNAT domain AU28_RS11650 IPR016181 Acyl-CoA N-acyltransferase AU28_RS11655 IPR001279 Beta-lactamase-like AU28_RS11655 IPR013469 Ribonuclease BN AU28_RS11655 IPR013471 Ribonuclease Z/BN AU28_RS11660 IPR001789 Signal transduction response regulator, receiver domain AU28_RS11660 IPR002545 CheW-like protein AU28_RS11660 IPR011006 CheY-like superfamily AU28_RS11660 IPR024181 Chemotaxis response regulator CheV AU28_RS11665 IPR002035 von Willebrand factor, type A AU28_RS11665 IPR021908 Protein of unknown function DUF3520 AU28_RS11665 IPR022156 Uncharacterised protein YfbK, N-terminal AU28_RS11670 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase AU28_RS11670 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 AU28_RS11675 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase AU28_RS11675 IPR003918 NADH:ubiquinone oxidoreductase AU28_RS11675 IPR010227 NADH-quinone oxidoreductase, chain M/4 AU28_RS11680 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal AU28_RS11680 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase AU28_RS11680 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 AU28_RS11680 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup AU28_RS11685 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K AU28_RS11690 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 AU28_RS11695 IPR010226 NADH-quinone oxidoreductase, chain I AU28_RS11695 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS11695 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS11700 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H AU28_RS11700 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site AU28_RS11705 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site AU28_RS11705 IPR001041 2Fe-2S ferredoxin-type domain AU28_RS11705 IPR006656 Molybdopterin oxidoreductase AU28_RS11705 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS11705 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS11705 IPR009010 Aspartate decarboxylase-like domain AU28_RS11705 IPR010228 NADH:ubiquinone oxidoreductase, subunit G AU28_RS11705 IPR012675 Beta-grasp domain AU28_RS11705 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding AU28_RS11710 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site AU28_RS11710 IPR011537 NADH ubiquinone oxidoreductase, F subunit AU28_RS11710 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit AU28_RS11710 IPR019554 Soluble ligand binding domain AU28_RS11710 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding AU28_RS11715 IPR002023 NADH-quinone oxidoreductase subunit E-like AU28_RS11715 IPR012336 Thioredoxin-like fold AU28_RS11720 IPR001135 NADH-quinone oxidoreductase, subunit D AU28_RS11720 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit AU28_RS11720 IPR010218 NADH dehydrogenase, subunit C AU28_RS11720 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site AU28_RS11720 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H AU28_RS11720 IPR023062 NADH dehydrogenase, subunit CD AU28_RS11720 IPR029014 NiFe hydrogenase-like AU28_RS11725 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AU28_RS11725 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit AU28_RS11730 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 AU28_RS11730 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid AU28_RS11740 IPR000847 Transcription regulator HTH, LysR AU28_RS11740 IPR005119 LysR, substrate-binding AU28_RS11740 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS11750 IPR004839 Aminotransferase, class I/classII AU28_RS11750 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS11750 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS11750 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS11755 IPR003607 HD/PDEase domain AU28_RS11755 IPR006674 HD domain AU28_RS11755 IPR022971 5'-deoxynucleotidase YfbR AU28_RS11760 IPR004680 Citrate transporter-like domain AU28_RS11760 IPR006037 Regulator of K+ conductance, C-terminal AU28_RS11760 IPR031312 AU28_RS11760 AU28_RS11765 IPR006439 HAD hydrolase, subfamily IA AU28_RS11765 IPR023214 HAD-like domain AU28_RS11770 IPR005587 Uncharacterised protein family UPF0304, YfbU AU28_RS11770 IPR023145 YfbU, helix-hairpin domain AU28_RS11770 IPR023146 YfbU, alpha-helical bundle domain AU28_RS11775 IPR007334 Uncharacterised protein family UPF0208 AU28_RS11780 IPR000890 Aliphatic acid kinase, short-chain AU28_RS11780 IPR004372 Acetate/Proprionate kinase AU28_RS11780 IPR023865 Aliphatic acid kinase, short-chain, conserved site AU28_RS11785 IPR002505 Phosphate acetyl/butaryl transferase AU28_RS11785 IPR004614 Phosphate acetyltransferase AU28_RS11785 IPR010766 DRTGG AU28_RS11785 IPR016475 Phosphate acetyltransferase, bacteria AU28_RS11785 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS11785 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like AU28_RS11790 IPR018385 C4-dicarboxylate anaerobic carrier-like AU28_RS11795 IPR005475 Transketolase-like, pyrimidine-binding domain AU28_RS11795 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AU28_RS11795 IPR029061 Thiamin diphosphate-binding fold AU28_RS11795 IPR033247 AU28_RS11795 AU28_RS11795 IPR033248 AU28_RS11795 AU28_RS11800 IPR005474 Transketolase, N-terminal AU28_RS11800 IPR029061 Thiamin diphosphate-binding fold AU28_RS11800 IPR033247 AU28_RS11800 AU28_RS11805 IPR004703 Phosphotransferase system, sugar-specific permease component AU28_RS11810 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS11815 IPR002178 PTS EIIA type-2 domain AU28_RS11815 IPR016152 Phosphotransferase/anion transporter AU28_RS11825 IPR000843 Transcription regulator HTH, LacI AU28_RS11825 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS11825 IPR028082 Periplasmic binding protein-like I AU28_RS11830 IPR000086 NUDIX hydrolase domain AU28_RS11830 IPR015797 NUDIX hydrolase domain-like AU28_RS11830 IPR024195 NUDIX hydrolase, YfcD, predicted AU28_RS11835 IPR000979 Phosphodiesterase MJ0936/Vps29 AU28_RS11835 IPR020935 Phosphodiesterase YfcE, conserved site AU28_RS11835 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type AU28_RS11835 IPR029052 Metallo-dependent phosphatase-like AU28_RS11840 IPR004045 Glutathione S-transferase, N-terminal AU28_RS11840 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS11840 IPR012336 Thioredoxin-like fold AU28_RS11845 IPR004045 Glutathione S-transferase, N-terminal AU28_RS11845 IPR004046 Glutathione S-transferase, C-terminal AU28_RS11845 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS11845 IPR012336 Thioredoxin-like fold AU28_RS11850 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AU28_RS11850 IPR010099 Sugar nucleotide epimerase YfcH,-like putative AU28_RS11850 IPR013549 Domain of unknown function DUF1731 AU28_RS11850 IPR016040 NAD(P)-binding domain AU28_RS11855 IPR003439 ABC transporter-like AU28_RS11855 IPR003593 AAA+ ATPase domain AU28_RS11855 IPR017871 ABC transporter, conserved site AU28_RS11855 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS11855 IPR030679 AU28_RS11855 AU28_RS11860 IPR000515 MetI-like domain AU28_RS11860 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AU28_RS11865 IPR000515 MetI-like domain AU28_RS11865 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AU28_RS11865 IPR030199 AU28_RS11865 AU28_RS11870 IPR001638 Extracellular solute-binding protein, family 3 AU28_RS11870 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein AU28_RS11870 IPR018313 Extracellular solute-binding protein, family 3, conserved site AU28_RS11875 IPR001638 Extracellular solute-binding protein, family 3 AU28_RS11875 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein AU28_RS11875 IPR018313 Extracellular solute-binding protein, family 3, conserved site AU28_RS11880 IPR003382 Flavoprotein AU28_RS11880 IPR004507 Decarboxylase UbiX/Pad1 AU28_RS11885 IPR002293 Amino acid/polyamine transporter I AU28_RS11885 IPR004841 Amino acid permease/ SLC12A domain AU28_RS11890 IPR001608 Alanine racemase, N-terminal AU28_RS11890 IPR029066 PLP-binding barrel AU28_RS11895 IPR002293 Amino acid/polyamine transporter I AU28_RS11900 IPR000183 Ornithine/DAP/Arg decarboxylase AU28_RS11900 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AU28_RS11900 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AU28_RS11900 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AU28_RS11900 IPR029066 PLP-binding barrel AU28_RS11905 IPR000014 PAS domain AU28_RS11905 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS11905 IPR002197 DNA binding HTH domain, Fis-type AU28_RS11905 IPR003593 AAA+ ATPase domain AU28_RS11905 IPR009057 Homeodomain-like AU28_RS11905 IPR013656 PAS fold-4 AU28_RS11905 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS11905 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS11910 IPR000836 Phosphoribosyltransferase domain AU28_RS11910 IPR005854 Amidophosphoribosyl transferase AU28_RS11910 IPR029055 Nucleophile aminohydrolases, N-terminal AU28_RS11910 IPR029057 Phosphoribosyltransferase-like AU28_RS11915 IPR003825 Colicin V production, CvpA AU28_RS11920 IPR007730 Sporulation-related domain AU28_RS11920 IPR032898 AU28_RS11920 AU28_RS11925 IPR001645 Folylpolyglutamate synthetase AU28_RS11925 IPR004101 Mur ligase, C-terminal AU28_RS11925 IPR013221 Mur ligase, central AU28_RS11925 IPR018109 Folylpolyglutamate synthetase, conserved site AU28_RS11930 IPR000022 Carboxyl transferase AU28_RS11930 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AU28_RS11930 IPR029045 ClpP/crotonase-like domain AU28_RS11935 IPR032816 AU28_RS11935 AU28_RS11935 IPR032818 AU28_RS11935 AU28_RS11940 IPR001406 Pseudouridine synthase I, TruA AU28_RS11940 IPR020094 Pseudouridine synthase I, TruA, N-terminal AU28_RS11940 IPR020095 Pseudouridine synthase I, TruA, C-terminal AU28_RS11940 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain AU28_RS11940 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS11945 IPR000534 Semialdehyde dehydrogenase, NAD-binding AU28_RS11945 IPR012080 Aspartate-semialdehyde dehydrogenase AU28_RS11945 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AU28_RS11945 IPR016040 NAD(P)-binding domain AU28_RS11950 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AU28_RS11950 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AU28_RS11950 IPR016040 NAD(P)-binding domain AU28_RS11950 IPR020921 Erythronate-4-phosphate dehydrogenase AU28_RS11950 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain AU28_RS11950 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AU28_RS11950 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AU28_RS11955 IPR023597 Flagellar regulator Flk AU28_RS11960 IPR011701 Major facilitator superfamily AU28_RS11960 IPR020846 Major facilitator superfamily domain AU28_RS11965 IPR009061 DNA binding domain, putative AU28_RS11965 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS11970 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS11970 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS11975 IPR000064 Endopeptidase, NLPC/P60 domain AU28_RS11980 IPR024289 Domain of unknown function DUF3828 AU28_RS11985 IPR003675 CAAX amino terminal protease AU28_RS11990 IPR014030 Beta-ketoacyl synthase, N-terminal AU28_RS11990 IPR014031 Beta-ketoacyl synthase, C-terminal AU28_RS11990 IPR016039 Thiolase-like AU28_RS11990 IPR018201 Beta-ketoacyl synthase, active site AU28_RS11990 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AU28_RS11995 IPR006076 FAD dependent oxidoreductase AU28_RS11995 IPR008471 MnmC-like methyltransferase AU28_RS11995 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal AU28_RS11995 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC AU28_RS11995 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS11995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS12000 IPR014987 Uncharacterised protein family YfcL AU28_RS12005 IPR007411 Protein of unknown function DUF462 AU28_RS12010 IPR002781 Transmembrane protein TauE like AU28_RS12015 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase AU28_RS12015 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AU28_RS12020 IPR000453 Chorismate synthase AU28_RS12020 IPR020541 Chorismate synthase, conserved site AU28_RS12025 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS12025 IPR004556 Modification methylase HemK AU28_RS12025 IPR007848 Methyltransferase small domain AU28_RS12025 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase AU28_RS12025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS12030 IPR002625 Smr protein/MutS2 C-terminal AU28_RS12030 IPR022990 Uncharacterised protein family UPF0115 AU28_RS12035 IPR004449 Phosphohistidine phosphatase SixA, subgroup AU28_RS12035 IPR013078 Histidine phosphatase superfamily, clade-1 AU28_RS12035 IPR029033 Histidine phosphatase superfamily AU28_RS12040 IPR001753 Crotonase superfamily AU28_RS12040 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AU28_RS12040 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AU28_RS12040 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AU28_RS12040 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS12040 IPR012802 Fatty oxidation complex, alpha subunit FadJ AU28_RS12040 IPR013328 Dehydrogenase, multihelical AU28_RS12040 IPR016040 NAD(P)-binding domain AU28_RS12040 IPR029045 ClpP/crotonase-like domain AU28_RS12045 IPR002155 Thiolase AU28_RS12045 IPR012806 Acetyl-CoA C-acyltransferase FadI AU28_RS12045 IPR016039 Thiolase-like AU28_RS12045 IPR020610 Thiolase, active site AU28_RS12045 IPR020613 Thiolase, conserved site AU28_RS12045 IPR020615 Thiolase, acyl-enzyme intermediate active site AU28_RS12045 IPR020616 Thiolase, N-terminal AU28_RS12045 IPR020617 Thiolase, C-terminal AU28_RS12050 IPR005272 Conserved hypothetical protein CHP00743 AU28_RS12055 IPR005017 Membrane protein, aromatic hydrocarbon degradation AU28_RS12060 IPR007428 VacJ-like lipoprotein AU28_RS12065 IPR000292 Formate/nitrite transporter AU28_RS12065 IPR023271 Aquaporin-like AU28_RS12075 IPR007267 GtrA-like protein AU28_RS12075 IPR016480 Glucose translocase, bactoprenol-linked AU28_RS12080 IPR001173 Glycosyltransferase 2-like AU28_RS12080 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS12085 IPR002656 Acyltransferase 3 AU28_RS12085 IPR013830 AU28_RS12085 AU28_RS12090 IPR001207 Transposase, mutator type AU28_RS12095 IPR000036 Peptidase A26, omptin AU28_RS12095 IPR020079 Peptidase A26, omptin, conserved site AU28_RS12095 IPR020080 Outer membrane adhesin/peptidase omptin AU28_RS12095 IPR023619 Peptidase A26 AU28_RS12100 IPR001789 Signal transduction response regulator, receiver domain AU28_RS12100 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS12100 IPR002197 DNA binding HTH domain, Fis-type AU28_RS12100 IPR009057 Homeodomain-like AU28_RS12100 IPR011006 CheY-like superfamily AU28_RS12100 IPR025944 Sigma-54 interaction domain, conserved site AU28_RS12100 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS12105 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS12105 IPR003660 HAMP linker domain AU28_RS12105 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS12115 IPR000849 Sugar phosphate transporter AU28_RS12115 IPR011701 Major facilitator superfamily AU28_RS12115 IPR020846 Major facilitator superfamily domain AU28_RS12115 IPR021159 Glycerate/sugar phosphate transporter, conserved site AU28_RS12120 IPR024470 Protein of unknown function DUF2545 AU28_RS12130 IPR004960 Bacterial lipid A biosynthesis acyltransferase AU28_RS12130 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AU28_RS12130 IPR030857 AU28_RS12130 AU28_RS12135 IPR004839 Aminotransferase, class I/classII AU28_RS12135 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS12135 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS12135 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS12140 IPR003836 Glucokinase AU28_RS12145 IPR001807 Chloride channel, voltage gated AU28_RS12145 IPR014743 Chloride channel, core AU28_RS12145 IPR022969 Chloride channel YfeO AU28_RS12150 IPR000399 TPP-binding enzyme, conserved site AU28_RS12150 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AU28_RS12150 IPR012000 Thiamine pyrophosphate enzyme, central domain AU28_RS12150 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AU28_RS12150 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme AU28_RS12150 IPR029035 DHS-like NAD/FAD-binding domain AU28_RS12150 IPR029061 Thiamin diphosphate-binding fold AU28_RS12155 IPR001395 Aldo/keto reductase AU28_RS12155 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related AU28_RS12155 IPR023210 NADP-dependent oxidoreductase domain AU28_RS12160 IPR019638 Protein of unknown function DUF2502 AU28_RS12165 IPR001046 NRAMP family AU28_RS12170 IPR002668 Concentrative nucleoside transporter N-terminal domain AU28_RS12170 IPR008276 Concentrative nucleoside transporter AU28_RS12170 IPR011642 Nucleoside recognition Gate AU28_RS12170 IPR011657 Concentrative nucleoside transporter C-terminal domain AU28_RS12170 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial AU28_RS12175 IPR000160 GGDEF domain AU28_RS12175 IPR001633 EAL domain AU28_RS12175 IPR007895 MASE1 AU28_RS12175 IPR029787 Nucleotide cyclase AU28_RS12190 IPR009061 DNA binding domain, putative AU28_RS12190 IPR010749 Protein of unknown function DUF1323 AU28_RS12190 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS12195 IPR009061 DNA binding domain, putative AU28_RS12195 IPR010749 Protein of unknown function DUF1323 AU28_RS12195 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS12200 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AU28_RS12200 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AU28_RS12200 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial AU28_RS12200 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding AU28_RS12200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS12200 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AU28_RS12200 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain AU28_RS12200 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 AU28_RS12225 IPR000847 Transcription regulator HTH, LysR AU28_RS12225 IPR005119 LysR, substrate-binding AU28_RS12225 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS12230 IPR020017 XapX domain AU28_RS12235 IPR004740 Nucleoside:H+ symporter AU28_RS12235 IPR020846 Major facilitator superfamily domain AU28_RS12240 IPR000845 Nucleoside phosphorylase domain AU28_RS12240 IPR001369 PNP/MTAP phosphorylase AU28_RS12240 IPR010943 Xanthosine phosphorylase AU28_RS12240 IPR011268 Purine nucleoside phosphorylase AU28_RS12245 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like AU28_RS12250 IPR000847 Transcription regulator HTH, LysR AU28_RS12250 IPR005119 LysR, substrate-binding AU28_RS12250 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS12255 IPR016833 Putative sodium bile acid cotransporter AU28_RS12260 IPR024530 Protein of unknown function DUF3820 AU28_RS12265 IPR001357 BRCT domain AU28_RS12265 IPR001679 NAD-dependent DNA ligase AU28_RS12265 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AU28_RS12265 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type AU28_RS12265 IPR004150 NAD-dependent DNA ligase, OB-fold AU28_RS12265 IPR010994 RuvA domain 2-like AU28_RS12265 IPR012340 Nucleic acid-binding, OB-fold AU28_RS12265 IPR013839 NAD-dependent DNA ligase, adenylation AU28_RS12265 IPR013840 NAD-dependent DNA ligase, N-terminal AU28_RS12265 IPR018239 NAD-dependent DNA ligase, active site AU28_RS12265 IPR033136 AU28_RS12265 AU28_RS12270 IPR007449 ZipA, C-terminal FtsZ-binding domain AU28_RS12270 IPR011919 Cell division protein ZipA AU28_RS12275 IPR022985 CysZ, gammaproteobacteria AU28_RS12280 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AU28_RS12280 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS12280 IPR005856 Cysteine synthase K/M AU28_RS12280 IPR005859 Cysteine synthase A AU28_RS12290 IPR000032 Phosphocarrier HPr protein-like AU28_RS12290 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AU28_RS12290 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AU28_RS12295 IPR000121 PEP-utilising enzyme, C-terminal AU28_RS12295 IPR006318 Phosphoenolpyruvate-utilising enzyme AU28_RS12295 IPR008279 PEP-utilising enzyme, mobile domain AU28_RS12295 IPR008731 Phosphotransferase system, enzyme I N-terminal AU28_RS12295 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS12295 IPR018274 PEP-utilising enzyme, active site AU28_RS12295 IPR023151 PEP-utilising enzyme, conserved site AU28_RS12295 IPR024692 Phosphotransferase system, enzyme I AU28_RS12300 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 AU28_RS12300 IPR011055 Duplicated hybrid motif AU28_RS12310 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase AU28_RS12310 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AU28_RS12310 IPR023479 Pyridoxal kinase AU28_RS12310 IPR029056 Ribokinase-like AU28_RS12315 IPR000524 Transcription regulator HTH, GntR AU28_RS12315 IPR004839 Aminotransferase, class I/classII AU28_RS12315 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS12315 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS12315 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS12315 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS12320 IPR017926 Glutamine amidotransferase AU28_RS12320 IPR029062 Class I glutamine amidotransferase-like AU28_RS12330 IPR006597 Sel1-like AU28_RS12330 IPR011990 Tetratricopeptide-like helical domain AU28_RS12335 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AU28_RS12335 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS12335 IPR005856 Cysteine synthase K/M AU28_RS12335 IPR005858 Cysteine synthase B AU28_RS12340 IPR003439 ABC transporter-like AU28_RS12340 IPR003593 AAA+ ATPase domain AU28_RS12340 IPR005666 Sulphate transport system permease protein 1 AU28_RS12340 IPR008995 Molybdate/tungstate binding, C-terminal AU28_RS12340 IPR017871 ABC transporter, conserved site AU28_RS12340 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS12345 IPR000515 MetI-like domain AU28_RS12345 IPR005667 Sulphate ABC transporter permease protein 2 AU28_RS12345 IPR011866 Sulphate ABC transporter, permease protein CysW AU28_RS12350 IPR000515 MetI-like domain AU28_RS12350 IPR005667 Sulphate ABC transporter permease protein 2 AU28_RS12350 IPR011865 Sulphate ABC transporter, permease protein CysT AU28_RS12355 IPR000957 Sulphate/thiosulphate-binding, conserved site AU28_RS12355 IPR005669 Thiosulphate/Sulfate-binding protein AU28_RS12360 IPR002347 Glucose/ribitol dehydrogenase AU28_RS12360 IPR016040 NAD(P)-binding domain AU28_RS12365 IPR006314 Dyp-type peroxidase AU28_RS12365 IPR011008 Dimeric alpha-beta barrel AU28_RS12370 IPR010938 Protein of unknown function DUF1131 AU28_RS12375 IPR021318 Protein of unknown function DUF2919 AU28_RS12380 IPR000182 GNAT domain AU28_RS12380 IPR016181 Acyl-CoA N-acyltransferase AU28_RS12380 IPR017255 Acetyltransferase, GNAT, predicted AU28_RS12380 IPR023072 Acetyltransferase, YpeA AU28_RS12385 IPR002508 Cell wall hydrolase/autolysin, catalytic AU28_RS12390 IPR001260 Coproporphyrinogen III oxidase, aerobic AU28_RS12390 IPR018375 Coproporphyrinogen III oxidase, conserved site AU28_RS12400 IPR009057 Homeodomain-like AU28_RS12400 IPR018060 DNA binding HTH domain, AraC-type AU28_RS12400 IPR018062 HTH domain AraC-type, conserved site AU28_RS12405 IPR000249 Microcompartment protein, bacteria AU28_RS12405 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS12405 IPR020808 Bacterial microcompartments protein, conserved site AU28_RS12405 IPR032298 AU28_RS12405 AU28_RS12410 IPR000249 Microcompartment protein, bacteria AU28_RS12410 IPR009193 Polyhedral organelle shell protein, EutL/PduB type AU28_RS12410 IPR030983 AU28_RS12410 AU28_RS12415 IPR009246 Ethanolamine ammonia-lyase light chain AU28_RS12420 IPR010628 Ethanolamine ammonia lyase large subunit AU28_RS12420 IPR013785 Aldolase-type TIM barrel AU28_RS12425 IPR009377 Ethanolamine utilisation EutA AU28_RS12430 IPR007441 Ethanolamine utilisation protein EutH AU28_RS12435 IPR001670 Alcohol dehydrogenase, iron-type AU28_RS12435 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AU28_RS12440 IPR013366 Ethanolamine utilisation EutJ AU28_RS12445 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related AU28_RS12445 IPR015590 Aldehyde dehydrogenase domain AU28_RS12445 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS12445 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS12445 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS12450 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AU28_RS12450 IPR023414 Ethanolamine utilization protein-like domain AU28_RS12455 IPR000249 Microcompartment protein, bacteria AU28_RS12455 IPR020808 Bacterial microcompartments protein, conserved site AU28_RS12460 IPR002505 Phosphate acetyl/butaryl transferase AU28_RS12460 IPR004614 Phosphate acetyltransferase AU28_RS12460 IPR012147 Phosphate acetyl/butyryltransferase AU28_RS12465 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type AU28_RS12465 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like AU28_RS12470 IPR010424 Ethanolamine utilisation EutQ AU28_RS12470 IPR011051 RmlC-like cupin domain AU28_RS12470 IPR014710 RmlC-like jelly roll fold AU28_RS12475 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV AU28_RS12475 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS12480 IPR000249 Microcompartment protein, bacteria AU28_RS12480 IPR009307 Ethanolamine utilisation EutS AU28_RS12485 IPR002505 Phosphate acetyl/butaryl transferase AU28_RS12485 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase AU28_RS12485 IPR012301 Malic enzyme, N-terminal domain AU28_RS12485 IPR012302 Malic enzyme, NAD-binding AU28_RS12485 IPR015884 Malic enzyme, conserved site AU28_RS12485 IPR016040 NAD(P)-binding domain AU28_RS12490 IPR001585 Transaldolase AU28_RS12490 IPR004730 Transaldolase type 1 AU28_RS12490 IPR013785 Aldolase-type TIM barrel AU28_RS12490 IPR018225 Transaldolase, active site AU28_RS12495 IPR005474 Transketolase, N-terminal AU28_RS12495 IPR005475 Transketolase-like, pyrimidine-binding domain AU28_RS12495 IPR005478 Transketolase, bacterial-like AU28_RS12495 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AU28_RS12495 IPR020826 Transketolase binding site AU28_RS12495 IPR029061 Thiamin diphosphate-binding fold AU28_RS12495 IPR033247 AU28_RS12495 AU28_RS12495 IPR033248 AU28_RS12495 AU28_RS12505 IPR009560 Protein of unknown function DUF1176 AU28_RS12510 IPR000086 NUDIX hydrolase domain AU28_RS12510 IPR004385 Nucleoside diphosphate pyrophosphatase AU28_RS12510 IPR015797 NUDIX hydrolase domain-like AU28_RS12515 IPR001466 Beta-lactamase-related AU28_RS12515 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS12515 IPR022849 Peptidase S12, UPF0214, YfeW-type AU28_RS12520 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 AU28_RS12520 IPR016040 NAD(P)-binding domain AU28_RS12520 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS12520 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS12520 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS12520 IPR028261 Dihydroprymidine dehydrogenase domain II AU28_RS12525 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS12525 IPR003660 HAMP linker domain AU28_RS12525 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AU28_RS12525 IPR029095 NarX-like, N-terminal AU28_RS12530 IPR001036 Acriflavin resistance protein AU28_RS12530 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AU28_RS12530 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AU28_RS12535 IPR006504 Transcriptional regulator Spx/MgsR AU28_RS12535 IPR006660 Arsenate reductase-like AU28_RS12535 IPR012336 Thioredoxin-like fold AU28_RS12540 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AU28_RS12540 IPR002933 Peptidase M20 AU28_RS12540 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AU28_RS12540 IPR011650 Peptidase M20, dimerisation domain AU28_RS12545 IPR020910 Uncharacterised protein family UPF0370 AU28_RS12550 IPR000182 GNAT domain AU28_RS12550 IPR007807 Helicase domain AU28_RS12550 IPR013562 Domain of unknown function DUF1726 AU28_RS12550 IPR016181 Acyl-CoA N-acyltransferase AU28_RS12550 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA AU28_RS12550 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS12550 IPR032672 AU28_RS12550 AU28_RS12550 IPR033442 AU28_RS12550 AU28_RS12555 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AU28_RS12560 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase AU28_RS12560 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS12560 IPR018236 SAICAR synthetase, conserved site AU28_RS12560 IPR028923 SAICAR synthetase/ADE2, N-terminal AU28_RS12565 IPR010653 Lipoprotein, NlpB AU28_RS12565 IPR014524 Outer membrane protein assembly factor BamC AU28_RS12570 IPR002220 DapA-like AU28_RS12570 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AU28_RS12570 IPR013785 Aldolase-type TIM barrel AU28_RS12570 IPR020624 Dihydrodipicolinate synthetase, conserved site AU28_RS12570 IPR020625 Dihydrodipicolinate synthetase, active site AU28_RS12575 IPR016867 Glycine cleavage repressor GcvR AU28_RS12580 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AU28_RS12580 IPR012336 Thioredoxin-like fold AU28_RS12580 IPR024706 Peroxiredoxin, AhpC-type AU28_RS12585 IPR004381 Glycerate kinase AU28_RS12585 IPR018193 Glycerate kinase, flavodoxin-like domain AU28_RS12590 IPR003474 Gluconate transporter AU28_RS12595 IPR008599 Putative sugar diacid recognition AU28_RS12595 IPR009057 Homeodomain-like AU28_RS12595 IPR025736 PucR C-terminal helix-turn-helix domain AU28_RS12600 IPR002549 Uncharacterised protein family UPF0118 AU28_RS12605 IPR001915 Peptidase M48 AU28_RS12605 IPR011990 Tetratricopeptide-like helical domain AU28_RS12605 IPR030873 AU28_RS12605 AU28_RS12610 IPR006659 Arsenate reductase AU28_RS12610 IPR006660 Arsenate reductase-like AU28_RS12610 IPR012336 Thioredoxin-like fold AU28_RS12615 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) AU28_RS12615 IPR017788 DnaA regulatory inactivator Hda AU28_RS12615 IPR020591 Chromosomal replication control, initiator DnaA-like AU28_RS12615 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae AU28_RS12615 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS12620 IPR006042 Xanthine/uracil permease AU28_RS12620 IPR006043 Xanthine/uracil/vitamin C permease AU28_RS12625 IPR005765 Uracil phosphoribosyl transferase AU28_RS12625 IPR029057 Phosphoribosyltransferase-like AU28_RS12630 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase AU28_RS12630 IPR010918 AIR synthase-related protein, C-terminal domain AU28_RS12630 IPR016188 PurM, N-terminal-like AU28_RS12635 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AU28_RS12635 IPR002376 Formyl transferase, N-terminal AU28_RS12635 IPR004607 Phosphoribosylglycinamide formyltransferase AU28_RS12640 IPR003414 Polyphosphate kinase AU28_RS12640 IPR024953 Polyphosphate kinase middle domain AU28_RS12640 IPR025198 Polyphosphate kinase N-terminal domain AU28_RS12640 IPR025200 Polyphosphate kinase C-terminal domain AU28_RS12645 IPR003695 Ppx/GppA phosphatase AU28_RS12645 IPR022371 Exopolyphosphatase AU28_RS12645 IPR030673 AU28_RS12645 AU28_RS12650 IPR000160 GGDEF domain AU28_RS12650 IPR001633 EAL domain AU28_RS12650 IPR007895 MASE1 AU28_RS12660 IPR022576 Protein of unknown function DUF2633 AU28_RS12670 IPR010862 Protein of unknown function DUF1493 AU28_RS12675 IPR001584 Integrase, catalytic core AU28_RS12675 IPR012337 Ribonuclease H-like domain AU28_RS12680 IPR001674 GMP synthase, C-terminal AU28_RS12680 IPR004739 GMP synthase, N-terminal AU28_RS12680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS12680 IPR017926 Glutamine amidotransferase AU28_RS12680 IPR022310 NAD/GMP synthase AU28_RS12680 IPR022955 GMP synthase AU28_RS12680 IPR029062 Class I glutamine amidotransferase-like AU28_RS12685 IPR000644 CBS domain AU28_RS12685 IPR001093 IMP dehydrogenase/GMP reductase AU28_RS12685 IPR005990 Inosine-5'-monophosphate dehydrogenase AU28_RS12685 IPR013785 Aldolase-type TIM barrel AU28_RS12685 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AU28_RS12690 IPR003753 Exonuclease VII, large subunit AU28_RS12690 IPR020579 Exonuclease VII, large subunit, C-terminal AU28_RS12690 IPR025824 OB-fold nucleic acid binding domain AU28_RS12695 IPR005546 Autotransporter beta-domain AU28_RS12695 IPR006315 Outer membrane autotransporter barrel AU28_RS12695 IPR011050 Pectin lyase fold/virulence factor AU28_RS12695 IPR012332 P22 tailspike C-terminal domain-like AU28_RS12695 IPR013425 Autotransporter-associated beta strand repeat AU28_RS12700 IPR008541 Protein of unknown function DUF823 AU28_RS12700 IPR008542 Protein of unknown function DUF824 AU28_RS12705 IPR008541 Protein of unknown function DUF823 AU28_RS12705 IPR008542 Protein of unknown function DUF824 AU28_RS12715 IPR003535 Intimin/invasin bacterial adhesion mediator protein AU28_RS12715 IPR024519 Domain of unknown function DUF3442, intimin/invasin AU28_RS12720 IPR010807 Protein of unknown function DUF1407 AU28_RS12720 IPR029037 YfgJ-like AU28_RS12725 IPR005225 Small GTP-binding protein domain AU28_RS12725 IPR006073 GTP binding domain AU28_RS12725 IPR015946 K homology domain-like, alpha/beta AU28_RS12725 IPR016484 GTP-binding protein EngA AU28_RS12725 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS12725 IPR032859 AU28_RS12725 AU28_RS12730 IPR002372 Pyrrolo-quinoline quinone repeat AU28_RS12730 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily AU28_RS12730 IPR017687 Outer membrane protein assembly factor BamB AU28_RS12730 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AU28_RS12730 IPR027295 Quinonprotein alcohol dehydrogenase-like domain AU28_RS12735 IPR011990 Tetratricopeptide-like helical domain AU28_RS12735 IPR018704 Domain of unknown function DUF09976 AU28_RS12735 IPR026039 Uncharacterised protein family UPF0070 AU28_RS12740 IPR004154 Anticodon-binding AU28_RS12740 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AU28_RS12740 IPR015807 Histidine-tRNA ligase AU28_RS12745 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type AU28_RS12745 IPR011005 Dihydropteroate synthase-like AU28_RS12745 IPR013785 Aldolase-type TIM barrel AU28_RS12745 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial AU28_RS12750 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS12750 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS12750 IPR023690 Cytoskeleton protein RodZ AU28_RS12750 IPR025194 Domain of unknown function DUF4115 AU28_RS12755 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr AU28_RS12755 IPR007197 Radical SAM AU28_RS12755 IPR013785 Aldolase-type TIM barrel AU28_RS12755 IPR027492 Dual-specificity RNA methyltransferase RlmN AU28_RS12760 IPR001564 Nucleoside diphosphate kinase AU28_RS12760 IPR023005 Nucleoside diphosphate kinase, active site AU28_RS12765 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS12765 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS12770 IPR007059 DMSO reductase anchor subunit (DmsC) AU28_RS12775 IPR014297 Dimethylsulphoxide reductase, chain B AU28_RS12775 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS12775 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS12780 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS12780 IPR006656 Molybdopterin oxidoreductase AU28_RS12780 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS12780 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS12780 IPR009010 Aspartate decarboxylase-like domain AU28_RS12780 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE AU28_RS12785 IPR001264 Glycosyl transferase, family 51 AU28_RS12785 IPR001460 Penicillin-binding protein, transpeptidase AU28_RS12785 IPR009647 Penicillin-binding, C-terminal AU28_RS12785 IPR011815 Penicillin-binding protein 1C AU28_RS12785 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS12785 IPR023346 Lysozyme-like domain AU28_RS12790 IPR001599 Alpha-2-macroglobulin AU28_RS12790 IPR002890 Alpha-2-macroglobulin, N-terminal AU28_RS12790 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AU28_RS12790 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AU28_RS12790 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming AU28_RS12790 IPR021868 Alpha-2-macroglobulin MG1 domain AU28_RS12790 IPR026284 Alpha-2-macroglobulin domain protein, bacteria AU28_RS12795 IPR001307 Thiosulphate sulfurtransferase, conserved site AU28_RS12795 IPR001763 Rhodanese-like domain AU28_RS12800 IPR031990 AU28_RS12800 AU28_RS12805 IPR009839 SseB protein N-terminal domain AU28_RS12805 IPR027945 SseB protein, C-terminal AU28_RS12810 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AU28_RS12810 IPR008330 Peptidase M17, peptidase B AU28_RS12810 IPR011356 Leucine aminopeptidase/peptidase B AU28_RS12815 IPR007479 ISC system FeS cluster assembly, IscX AU28_RS12820 IPR001041 2Fe-2S ferredoxin-type domain AU28_RS12820 IPR001055 Adrenodoxin AU28_RS12820 IPR011536 Ferredoxin, 2Fe-2S type AU28_RS12820 IPR012675 Beta-grasp domain AU28_RS12820 IPR018298 Adrenodoxin, iron-sulphur binding site AU28_RS12825 IPR010236 ISC system FeS cluster assembly, HscA chaperone AU28_RS12825 IPR013126 Heat shock protein 70 family AU28_RS12825 IPR018181 Heat shock protein 70, conserved site AU28_RS12825 IPR029047 Heat shock protein 70kD, peptide-binding domain AU28_RS12825 IPR029048 Heat shock protein 70kD, C-terminal domain AU28_RS12830 IPR001623 DnaJ domain AU28_RS12830 IPR004640 Co-chaperone Hsc20 AU28_RS12830 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain AU28_RS12835 IPR000361 FeS cluster biogenesis AU28_RS12835 IPR011302 ISC system FeS cluster assembly, IscA scaffold AU28_RS12835 IPR016092 FeS cluster insertion protein AU28_RS12835 IPR017870 FeS cluster insertion, C-terminal, conserved site AU28_RS12835 IPR031108 AU28_RS12835 AU28_RS12840 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal AU28_RS12840 IPR011339 ISC system FeS cluster assembly, IscU scaffold AU28_RS12845 IPR000192 Aminotransferase class V domain AU28_RS12845 IPR010240 Cysteine desulfurase AU28_RS12845 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS12845 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS12845 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS12845 IPR016454 Cysteine desulfurase, NifS AU28_RS12845 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site AU28_RS12850 IPR000944 Transcription regulator Rrf2-like AU28_RS12850 IPR010242 Transcription factor HTH, IscR AU28_RS12850 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS12850 IPR030489 AU28_RS12850 AU28_RS12855 IPR001537 tRNA/rRNA methyltransferase, SpoU type AU28_RS12855 IPR004384 RNA methyltransferase TrmH, group 1 AU28_RS12855 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AU28_RS12855 IPR029028 Alpha/beta knot methyltransferases AU28_RS12860 IPR000760 Inositol monophosphatase AU28_RS12860 IPR020550 Inositol monophosphatase, conserved site AU28_RS12860 IPR020583 Inositol monophosphatase, metal-binding site AU28_RS12860 IPR022337 Inositol monophosphatase, SuhB AU28_RS12865 IPR022742 Putative lysophospholipase AU28_RS12865 IPR029058 Alpha/Beta hydrolase fold AU28_RS12875 IPR001433 Oxidoreductase FAD/NAD(P)-binding AU28_RS12875 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit AU28_RS12875 IPR014260 Sulphite reductase, subunit B AU28_RS12875 IPR017938 Riboflavin synthase-like beta-barrel AU28_RS12875 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain AU28_RS12880 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AU28_RS12880 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site AU28_RS12880 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AU28_RS12880 IPR014261 Sulphite reductase, subunit C AU28_RS12880 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS12885 IPR011541 Nickel/cobalt transporter, high-affinity AU28_RS12890 IPR010412 Protein of unknown function DUF1007 AU28_RS12890 IPR016537 Uncharacterised conserved protein UCP008159, AU28_RS12895 IPR011608 PRD domain AU28_RS12900 IPR020846 Major facilitator superfamily domain AU28_RS12900 IPR024989 Major facilitator superfamily associated domain AU28_RS12900 IPR026032 Phenylproprionate/maltose permease AU28_RS12905 IPR001085 Serine hydroxymethyltransferase AU28_RS12905 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS12905 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS12905 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS12905 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AU28_RS12910 IPR000971 Globin AU28_RS12910 IPR001221 Phenol hydroxylase reductase AU28_RS12910 IPR001433 Oxidoreductase FAD/NAD(P)-binding AU28_RS12910 IPR008333 Oxidoreductase, FAD-binding domain AU28_RS12910 IPR009050 Globin-like AU28_RS12910 IPR012292 Globin, structural domain AU28_RS12910 IPR017938 Riboflavin synthase-like beta-barrel AU28_RS12910 IPR023950 Flavohemoprotein AU28_RS12915 IPR001867 Signal transduction response regulator, C-terminal AU28_RS12915 IPR011990 Tetratricopeptide-like helical domain AU28_RS12915 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS12915 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS12920 IPR002293 Amino acid/polyamine transporter I AU28_RS12920 IPR004754 Amino acid antiporter AU28_RS12925 IPR000310 Orn/Lys/Arg decarboxylase, major domain AU28_RS12925 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal AU28_RS12925 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal AU28_RS12925 IPR011193 Ornithine/lysine/arginine decarboxylase AU28_RS12925 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS12925 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS12925 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS12930 IPR000109 Proton-dependent oligopeptide transporter family AU28_RS12930 IPR005279 Amino acid/peptide transporter family AU28_RS12930 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site AU28_RS12930 IPR020846 Major facilitator superfamily domain AU28_RS12935 IPR002187 Nitrogen regulatory protein PII AU28_RS12935 IPR002332 Nitrogen regulatory protein P-II, urydylation site AU28_RS12935 IPR011322 Nitrogen regulatory PII-like, alpha/beta AU28_RS12935 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AU28_RS12935 IPR017918 Nitrogen regulatory protein PII, conserved site AU28_RS12940 IPR001789 Signal transduction response regulator, receiver domain AU28_RS12940 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS12940 IPR003593 AAA+ ATPase domain AU28_RS12940 IPR009057 Homeodomain-like AU28_RS12940 IPR011006 CheY-like superfamily AU28_RS12940 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AU28_RS12940 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS12940 IPR025944 Sigma-54 interaction domain, conserved site AU28_RS12940 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS12945 IPR025262 Quorum-sensing regulator protein G AU28_RS12950 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS12950 IPR003660 HAMP linker domain AU28_RS12950 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS12950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS12955 IPR010073 Phosphoribosylformylglycinamidine synthase AU28_RS12955 IPR010918 AIR synthase-related protein, C-terminal domain AU28_RS12955 IPR016188 PurM, N-terminal-like AU28_RS12955 IPR029062 Class I glutamine amidotransferase-like AU28_RS12965 IPR000189 Prokaryotic transglycosylase, active site AU28_RS12965 IPR001638 Extracellular solute-binding protein, family 3 AU28_RS12965 IPR008258 Lytic transglycosylase-like SLT domain AU28_RS12965 IPR023346 Lysozyme-like domain AU28_RS12965 IPR023703 Membrane-bound lytic murein transglycosylase F AU28_RS12970 IPR016192 APOBEC/CMP deaminase, zinc-binding AU28_RS12970 IPR016193 Cytidine deaminase-like AU28_RS12970 IPR028883 tRNA-specific adenosine deaminase AU28_RS12975 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB AU28_RS12975 IPR023214 HAD-like domain AU28_RS12980 IPR001996 Phosphotransferase system, IIB component, type 1 AU28_RS12980 IPR003352 Phosphotransferase system, EIIC AU28_RS12980 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AU28_RS12985 IPR001347 Sugar isomerase (SIS) AU28_RS12985 IPR005486 Glucokinase regulatory protein, conserved site AU28_RS12985 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ AU28_RS12990 IPR000281 Helix-turn-helix protein RpiR AU28_RS12990 IPR001347 Sugar isomerase (SIS) AU28_RS12990 IPR009057 Homeodomain-like AU28_RS12990 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS12995 IPR003710 Ketopantoate reductase ApbA/PanE AU28_RS12995 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS12995 IPR013328 Dehydrogenase, multihelical AU28_RS12995 IPR013332 Ketopantoate reductase, N-terminal domain AU28_RS12995 IPR013752 Ketopantoate reductase, C-terminal domain AU28_RS12995 IPR016040 NAD(P)-binding domain AU28_RS13000 IPR011701 Major facilitator superfamily AU28_RS13000 IPR020846 Major facilitator superfamily domain AU28_RS13005 IPR000847 Transcription regulator HTH, LysR AU28_RS13005 IPR005119 LysR, substrate-binding AU28_RS13005 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS13010 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS13015 IPR002582 Holo-[acyl carrier protein] synthase AU28_RS13015 IPR004568 Phosphopantethiene-protein transferase domain AU28_RS13015 IPR008278 4'-phosphopantetheinyl transferase superfamily AU28_RS13020 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ AU28_RS13020 IPR013785 Aldolase-type TIM barrel AU28_RS13025 IPR003717 Recombination protein O, RecO AU28_RS13025 IPR012340 Nucleic acid-binding, OB-fold AU28_RS13025 IPR022572 DNA replication/recombination mediator RecO, N-terminal AU28_RS13030 IPR004044 K Homology domain, type 2 AU28_RS13030 IPR005225 Small GTP-binding protein domain AU28_RS13030 IPR005662 GTP-binding protein Era AU28_RS13030 IPR006073 GTP binding domain AU28_RS13030 IPR009019 K homology domain, prokaryotic type AU28_RS13030 IPR015946 K homology domain-like, alpha/beta AU28_RS13030 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13035 IPR000999 Ribonuclease III domain AU28_RS13035 IPR011907 Ribonuclease III AU28_RS13035 IPR014720 Double-stranded RNA-binding domain AU28_RS13040 IPR000223 Peptidase S26A, signal peptidase I AU28_RS13040 IPR015927 Peptidase S24/S26A/S26B/S26C AU28_RS13040 IPR019533 Peptidase S26 AU28_RS13040 IPR019756 Peptidase S26A, signal peptidase I, serine active site AU28_RS13040 IPR019757 Peptidase S26A, signal peptidase I, lysine active site AU28_RS13040 IPR019758 Peptidase S26A, signal peptidase I, conserved site AU28_RS13040 IPR019759 Peptidase S24/S26A/S26B AU28_RS13040 IPR019766 Peptidase S26A, all-beta subdomain AU28_RS13040 IPR028360 Peptidase S24/S26, beta-ribbon domain AU28_RS13045 IPR000640 Translation elongation factor EFG, V domain AU28_RS13045 IPR000795 Elongation factor, GTP-binding domain AU28_RS13045 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AU28_RS13045 IPR005225 Small GTP-binding protein domain AU28_RS13045 IPR006297 Elongation factor 4 AU28_RS13045 IPR009022 Elongation factor G, III-V domain AU28_RS13045 IPR013842 GTP-binding protein LepA, C-terminal AU28_RS13045 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13045 IPR031157 AU28_RS13045 AU28_RS13050 IPR007359 Positive regulator of sigma(E), RseC/MucC AU28_RS13050 IPR026268 Protein RseC AU28_RS13055 IPR005588 MucB/RseB AU28_RS13055 IPR033434 AU28_RS13055 AU28_RS13055 IPR033436 AU28_RS13055 AU28_RS13060 IPR005572 Anti sigma-E protein RseA, N-terminal AU28_RS13060 IPR005573 Anti sigma-E protein RseA, C-terminal AU28_RS13060 IPR026279 Sigma-E factor negative regulatory protein RseA AU28_RS13065 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AU28_RS13065 IPR007627 RNA polymerase sigma-70 region 2 AU28_RS13065 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13065 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AU28_RS13065 IPR013324 RNA polymerase sigma factor, region 3/4 AU28_RS13065 IPR013325 RNA polymerase sigma factor, region 2 AU28_RS13065 IPR014284 RNA polymerase sigma-70 like domain AU28_RS13065 IPR014286 RNA polymerase sigma-70 RpoE type AU28_RS13070 IPR003953 FAD binding domain AU28_RS13070 IPR005288 L-aspartate oxidase AU28_RS13070 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AU28_RS13070 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS13070 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AU28_RS13075 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS13075 IPR007848 Methyltransferase small domain AU28_RS13075 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase AU28_RS13075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS13080 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AU28_RS13080 IPR001650 Helicase, C-terminal AU28_RS13080 IPR011545 DEAD/DEAH box helicase domain AU28_RS13080 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS13080 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13080 IPR028621 ATP-dependent RNA helicase SrmB AU28_RS13085 IPR000847 Transcription regulator HTH, LysR AU28_RS13085 IPR005119 LysR, substrate-binding AU28_RS13085 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13090 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AU28_RS13095 IPR001150 Glycine radical domain AU28_RS13095 IPR011140 Autonomous glycyl radical cofactor GrcA AU28_RS13095 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AU28_RS13100 IPR002043 Uracil-DNA glycosylase AU28_RS13100 IPR005122 Uracil-DNA glycosylase-like AU28_RS13100 IPR018085 Uracil-DNA glycosylase, active site AU28_RS13105 IPR001537 tRNA/rRNA methyltransferase, SpoU type AU28_RS13105 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AU28_RS13105 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted AU28_RS13105 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AU28_RS13105 IPR029028 Alpha/beta knot methyltransferases AU28_RS13105 IPR029064 50S ribosomal protein L30e-like AU28_RS13110 IPR005746 Thioredoxin AU28_RS13110 IPR012336 Thioredoxin-like fold AU28_RS13110 IPR013766 Thioredoxin domain AU28_RS13115 IPR005636 DTW AU28_RS13120 IPR000182 GNAT domain AU28_RS13120 IPR003781 CoA-binding AU28_RS13120 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS13120 IPR016040 NAD(P)-binding domain AU28_RS13120 IPR016102 Succinyl-CoA synthetase-like AU28_RS13120 IPR016181 Acyl-CoA N-acyltransferase AU28_RS13120 IPR032875 AU28_RS13120 AU28_RS13125 IPR001736 Phospholipase D/Transphosphatidylase AU28_RS13125 IPR016270 Phospholipase D, phosphatidylserine synthase type AU28_RS13125 IPR025202 Phospholipase D-like domain AU28_RS13130 IPR017028 Uncharacterised conserved protein UCP034456 AU28_RS13130 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein AU28_RS13135 IPR004736 Citrate-proton symport AU28_RS13135 IPR005828 General substrate transporter AU28_RS13135 IPR005829 Sugar transporter, conserved site AU28_RS13135 IPR020846 Major facilitator superfamily domain AU28_RS13140 IPR025494 Protein of unknown function DUF4385 AU28_RS13165 IPR001270 ClpA/B family AU28_RS13165 IPR003593 AAA+ ATPase domain AU28_RS13165 IPR003959 ATPase, AAA-type, core AU28_RS13165 IPR004176 Clp, N-terminal AU28_RS13165 IPR017730 Chaperonin ClpB AU28_RS13165 IPR018368 ClpA/B, conserved site 1 AU28_RS13165 IPR019489 Clp ATPase, C-terminal AU28_RS13165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13165 IPR028299 ClpA/B, conserved site 2 AU28_RS13170 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AU28_RS13170 IPR011324 Cytotoxic necrotizing factor-like, catalytic AU28_RS13175 IPR002942 RNA-binding S4 domain AU28_RS13175 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AU28_RS13175 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AU28_RS13175 IPR006225 Pseudouridine synthase, RluC/RluD AU28_RS13175 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS13180 IPR011990 Tetratricopeptide-like helical domain AU28_RS13180 IPR017689 Outer membrane protein assembly factor BamD AU28_RS13185 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein AU28_RS13190 IPR001086 Prephenate dehydratase AU28_RS13190 IPR002701 Chorismate mutase AU28_RS13190 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase AU28_RS13190 IPR010952 Chorismate mutase, gammaproteobacteria AU28_RS13190 IPR018528 Prephenate dehydratase, conserved site AU28_RS13190 IPR020822 Chorismate mutase, type II AU28_RS13195 IPR005511 Senescence marker protein-30 (SMP-30) AU28_RS13195 IPR011042 Six-bladed beta-propeller, TolB-like AU28_RS13195 IPR013658 SMP-30/Gluconolactonase/LRE-like region AU28_RS13200 IPR002701 Chorismate mutase AU28_RS13200 IPR003099 Prephenate dehydrogenase AU28_RS13200 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein AU28_RS13200 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS13200 IPR011277 Chorismate mutase, T-protein AU28_RS13200 IPR016040 NAD(P)-binding domain AU28_RS13200 IPR020822 Chorismate mutase, type II AU28_RS13205 IPR006218 DAHP synthetase I/KDSA AU28_RS13205 IPR006219 DHAP synthase, class 1 AU28_RS13205 IPR013785 Aldolase-type TIM barrel AU28_RS13210 IPR025293 Protein of unknown function DUF4154 AU28_RS13215 IPR000160 GGDEF domain AU28_RS13215 IPR029787 Nucleotide cyclase AU28_RS13215 IPR033417 AU28_RS13215 AU28_RS13220 IPR001857 Ribosomal protein L19 AU28_RS13220 IPR008991 Translation protein SH3-like domain AU28_RS13220 IPR018257 Ribosomal protein L19, conserved site AU28_RS13225 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria AU28_RS13225 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain AU28_RS13225 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal AU28_RS13225 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AU28_RS13225 IPR029028 Alpha/beta knot methyltransferases AU28_RS13230 IPR002676 RimM protein AU28_RS13230 IPR009000 Translation protein, beta-barrel domain AU28_RS13230 IPR011033 PRC-barrel-like AU28_RS13230 IPR011961 16S rRNA processing protein RimM AU28_RS13230 IPR027275 PRC-barrel domain AU28_RS13235 IPR000307 Ribosomal protein S16 AU28_RS13235 IPR020592 Ribosomal protein S16, conserved site AU28_RS13235 IPR023803 Ribosomal protein S16 domain AU28_RS13240 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AU28_RS13240 IPR003593 AAA+ ATPase domain AU28_RS13240 IPR004125 Signal recognition particle, SRP54 subunit, M-domain AU28_RS13240 IPR004780 Signal recognition particle protein Ffh AU28_RS13240 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle AU28_RS13240 IPR022941 Signal recognition particle, SRP54 subunit AU28_RS13240 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13245 IPR002541 Cytochrome c assembly protein AU28_RS13250 IPR000644 CBS domain AU28_RS13250 IPR002550 Domain of unknown function DUF21 AU28_RS13250 IPR005170 Transporter-associated domain AU28_RS13250 IPR016166 FAD-binding, type 2 AU28_RS13250 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AU28_RS13260 IPR000740 GrpE nucleotide exchange factor AU28_RS13260 IPR009012 GrpE nucleotide exchange factor, head AU28_RS13260 IPR013805 GrpE nucleotide exchange factor, coiled-coil AU28_RS13265 IPR002504 Inorganic polyphosphate/ATP-NAD kinase AU28_RS13265 IPR016064 ATP-NAD kinase-like domain AU28_RS13265 IPR017437 ATP-NAD kinase, PpnK-type, all-beta AU28_RS13265 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 AU28_RS13270 IPR003395 RecF/RecN/SMC, N-terminal AU28_RS13270 IPR004604 DNA recombination/repair protein RecN AU28_RS13270 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13275 IPR007450 Lipoprotein SmpA/OmlA AU28_RS13275 IPR026592 Outer membrane protein assembly factor BamE AU28_RS13280 IPR005346 RnfH protein AU28_RS13280 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AU28_RS13285 IPR005031 Streptomyces cyclase/dehydrase AU28_RS13285 IPR023393 START-like domain AU28_RS13290 IPR000037 SsrA-binding protein AU28_RS13290 IPR020081 SsrA-binding protein, conserved site AU28_RS13290 IPR023620 Small protein B AU28_RS13295 IPR010221 VCBS repeat AU28_RS13295 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AU28_RS13295 IPR022038 Bacterial Ig-like domain AU28_RS13300 IPR003423 Outer membrane efflux protein AU28_RS13300 IPR010130 Type I secretion outer membrane protein, TolC AU28_RS13305 IPR003439 ABC transporter-like AU28_RS13305 IPR003593 AAA+ ATPase domain AU28_RS13305 IPR011527 ABC transporter type 1, transmembrane domain AU28_RS13305 IPR017750 ATPase, type I secretion system AU28_RS13305 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13310 IPR003997 RTX secretion protein D, Gram-negative bacteria AU28_RS13310 IPR010129 Type I secretion membrane fusion protein, HlyD AU28_RS13315 IPR007684 Zinc finger, Ogr/Delta-type AU28_RS13325 IPR009734 Myoviridae, GpU AU28_RS13325 IPR016912 Bacteriophage P2, GpU AU28_RS13330 IPR010090 Phage tail tape measure protein AU28_RS13335 IPR009493 Burkholderia phage phiE202, Gp27 AU28_RS13340 IPR019289 Bacteriophage tail protein Gp41, putative AU28_RS13345 IPR006498 Bacteriophage P2, FII, major tail tube protein AU28_RS13350 IPR007067 Tail sheath protein AU28_RS13355 IPR006120 Resolvase, HTH domain AU28_RS13355 IPR009057 Homeodomain-like AU28_RS13365 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AU28_RS13370 IPR011083 Phage tail collar domain AU28_RS13370 IPR022225 Phage tail fibre protein AU28_RS13375 IPR006521 Tail protein I AU28_RS13380 IPR006949 Baseplate assembly protein J-like, predicted AU28_RS13380 IPR014507 Baseplate assembly protein J, predicted AU28_RS13385 IPR007048 GpW/Gp25/anti-adapter protein IraD AU28_RS13390 IPR006531 Gp5 N-terminal AU28_RS13390 IPR013046 Bacteriophage Mu/P2, baseplate assembly AU28_RS13400 IPR006522 Phage virion morphogensis protein AU28_RS13405 IPR009678 Bacteriophage tail completion protein R AU28_RS13410 IPR020000 Bacteriophage P2, LysB AU28_RS13415 IPR002196 Glycoside hydrolase, family 24 AU28_RS13415 IPR023346 Lysozyme-like domain AU28_RS13415 IPR023347 Lysozyme domain AU28_RS13420 IPR032118 AU28_RS13420 AU28_RS13425 IPR008861 Bacteriophage P2, GpX AU28_RS13430 IPR009225 Bacteriophage head completion protein GpL AU28_RS13435 IPR010270 Bacteriophage P2, GpM AU28_RS13440 IPR006441 Bacteriophage P2, GpN, major capsid AU28_RS13445 IPR009228 Capsid scaffolding protein GpO AU28_RS13450 IPR004921 Terminase, large subunit AU28_RS13450 IPR010332 ATPase terminase subunit, putative AU28_RS13450 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13455 IPR006430 Phage portal protein, PBSX family AU28_RS13455 IPR006944 Bacteriophage/Gene transfer agent portal protein AU28_RS13455 IPR030935 AU28_RS13455 AU28_RS13460 IPR018891 Abortive bacteriophage infection, resistance AU28_RS13475 IPR010391 DNA damage-inducible protein DinI-like AU28_RS13485 IPR008766 Replication gene A protein AU28_RS13485 IPR020220 Retron, EC67, C-terminal AU28_RS13490 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS13490 IPR012263 Adenine modification methylase, M.EcoRV-type AU28_RS13490 IPR012327 D12 class N6 adenine-specific DNA methyltransferase AU28_RS13490 IPR023095 Adenine-specific methyltransferase, domain 2 AU28_RS13490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS13495 IPR000962 Zinc finger, DksA/TraR C4-type AU28_RS13495 IPR012783 Zinc finger, C4 DksA/TraR-type AU28_RS13500 IPR020126 Protein of unknown function DUF2732 AU28_RS13510 IPR021221 Bacteriophage 186, Fil AU28_RS13515 IPR009679 Bacteriophage 186, CII AU28_RS13525 IPR010744 Bacteriophage CI repressor AU28_RS13525 IPR032499 AU28_RS13525 AU28_RS13530 IPR002104 Integrase, catalytic AU28_RS13530 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS13530 IPR013762 Integrase-like, catalytic core AU28_RS13545 IPR024524 Protein of unknown function DUF3800 AU28_RS13555 IPR001584 Integrase, catalytic core AU28_RS13555 IPR012337 Ribonuclease H-like domain AU28_RS13555 IPR025948 HTH-like domain AU28_RS13560 IPR002514 Transposase IS3/IS911family AU28_RS13560 IPR009057 Homeodomain-like AU28_RS13565 IPR002686 Transposase IS200-like AU28_RS13570 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase AU28_RS13570 IPR010610 Domain of unknown function DUF1205 AU28_RS13575 IPR003439 ABC transporter-like AU28_RS13575 IPR003593 AAA+ ATPase domain AU28_RS13575 IPR011527 ABC transporter type 1, transmembrane domain AU28_RS13575 IPR017871 ABC transporter, conserved site AU28_RS13575 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13580 IPR000801 Putative esterase AU28_RS13580 IPR013783 Immunoglobulin-like fold AU28_RS13580 IPR014756 Immunoglobulin E-set AU28_RS13580 IPR021764 Enterochelin esterase, N-terminal AU28_RS13580 IPR029058 Alpha/Beta hydrolase fold AU28_RS13585 IPR000801 Putative esterase AU28_RS13585 IPR029058 Alpha/Beta hydrolase fold AU28_RS13590 IPR000531 TonB-dependent receptor, beta-barrel AU28_RS13590 IPR010105 TonB-dependent siderophore receptor AU28_RS13590 IPR010917 TonB-dependent receptor, conserved site AU28_RS13590 IPR012910 TonB-dependent receptor, plug AU28_RS13600 IPR001646 Pentapeptide repeat AU28_RS13605 IPR007488 Protein of unknown function DUF535 AU28_RS13610 IPR009977 Mig-14 AU28_RS13610 IPR016181 Acyl-CoA N-acyltransferase AU28_RS13620 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria AU28_RS13620 IPR011541 Nickel/cobalt transporter, high-affinity AU28_RS13625 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS13625 IPR003660 HAMP linker domain AU28_RS13625 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS13625 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS13625 IPR013727 Two-component sensor kinase N-terminal AU28_RS13630 IPR001789 Signal transduction response regulator, receiver domain AU28_RS13630 IPR001867 Signal transduction response regulator, C-terminal AU28_RS13630 IPR011006 CheY-like superfamily AU28_RS13630 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13630 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS13640 IPR005064 Bordetella uptake gene AU28_RS13645 IPR009936 Protein of unknown function DUF1468 AU28_RS13650 IPR002823 Protein of unknown function DUF112, transmembrane AU28_RS13655 IPR015038 Uncharacterised protein family CsiD AU28_RS13660 IPR006076 FAD dependent oxidoreductase AU28_RS13660 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS13660 IPR030862 AU28_RS13660 AU28_RS13665 IPR010102 Succinate semialdehyde dehydrogenase AU28_RS13665 IPR015590 Aldehyde dehydrogenase domain AU28_RS13665 IPR016160 Aldehyde dehydrogenase, cysteine active site AU28_RS13665 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS13665 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS13665 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS13665 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AU28_RS13670 IPR004632 4-aminobutyrate aminotransferase, bacterial AU28_RS13670 IPR005814 Aminotransferase class-III AU28_RS13670 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS13670 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS13670 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS13675 IPR002293 Amino acid/polyamine transporter I AU28_RS13675 IPR004840 Amino acid permease, conserved site AU28_RS13675 IPR004841 Amino acid permease/ SLC12A domain AU28_RS13675 IPR011265 GABA permease AU28_RS13680 IPR000524 Transcription regulator HTH, GntR AU28_RS13680 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS13680 IPR011711 GntR, C-terminal AU28_RS13680 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13685 IPR007055 BON domain AU28_RS13685 IPR014004 Transport-associated and nodulation domain, bacteria AU28_RS13685 IPR018392 LysM domain AU28_RS13690 IPR000612 Proteolipid membrane potential modulator AU28_RS13695 IPR001845 HTH ArsR-type DNA-binding domain AU28_RS13695 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13700 IPR001763 Rhodanese-like domain AU28_RS13700 IPR021309 Protein of unknown function DUF2892 AU28_RS13710 IPR001801 Histone-like protein H-NS AU28_RS13710 IPR027444 Histone-like protein H-NS, C-terminal domain AU28_RS13710 IPR027454 Histone-like protein H-NS family, oligomerisation domain AU28_RS13715 IPR010574 L-alanine exporter AlaE AU28_RS13720 IPR018994 Protein of unknown function DUF2002 AU28_RS13725 IPR010279 Protein of unknown function DUF883, ElaB AU28_RS13730 IPR000524 Transcription regulator HTH, GntR AU28_RS13730 IPR004839 Aminotransferase, class I/classII AU28_RS13730 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13730 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS13730 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS13735 IPR003779 Carboxymuconolactone decarboxylase-like AU28_RS13735 IPR004675 Alkylhydroperoxidase AhpD core AU28_RS13735 IPR029032 AhpD-like AU28_RS13745 IPR002109 Glutaredoxin AU28_RS13745 IPR011909 Glutaredoxin-like protein NrdH AU28_RS13745 IPR012336 Thioredoxin-like fold AU28_RS13750 IPR004465 Ribonucleotide reductase Class Ib, NrdI AU28_RS13750 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial AU28_RS13750 IPR029039 Flavoprotein-like AU28_RS13755 IPR000788 Ribonucleotide reductase large subunit, C-terminal AU28_RS13755 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal AU28_RS13755 IPR013346 Ribonucleotide reductase, class I , alpha subunit AU28_RS13755 IPR013509 Ribonucleotide reductase large subunit, N-terminal AU28_RS13755 IPR013554 Ribonucleotide reductase N-terminal AU28_RS13755 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE AU28_RS13760 IPR000358 Ribonucleotide reductase small subunit AU28_RS13760 IPR009078 Ferritin-like superfamily AU28_RS13760 IPR012348 Ribonucleotide reductase-related AU28_RS13760 IPR026494 Ribonucleoside reductase subunit beta, NrdF AU28_RS13760 IPR030475 AU28_RS13760 AU28_RS13765 IPR000644 CBS domain AU28_RS13765 IPR003439 ABC transporter-like AU28_RS13765 IPR003593 AAA+ ATPase domain AU28_RS13765 IPR005892 Glycine betaine transport ATP-binding subunit AU28_RS13765 IPR017871 ABC transporter, conserved site AU28_RS13765 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13770 IPR000515 MetI-like domain AU28_RS13775 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain AU28_RS13780 IPR011701 Major facilitator superfamily AU28_RS13780 IPR020846 Major facilitator superfamily domain AU28_RS13785 IPR000835 MarR-type HTH domain AU28_RS13785 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13785 IPR023187 Transcriptional regulator MarR-type, conserved site AU28_RS13790 IPR005694 Efflux pump membrane protein Emr AU28_RS13790 IPR006143 RND efflux pump, membrane fusion protein AU28_RS13790 IPR032317 AU28_RS13790 AU28_RS13795 IPR004638 Drug resistance transporter EmrB/QacA subfamily AU28_RS13795 IPR011701 Major facilitator superfamily AU28_RS13795 IPR020846 Major facilitator superfamily domain AU28_RS13800 IPR016963 Glycoporin RafY AU28_RS13800 IPR021570 LamB-type porin N-terminal domain AU28_RS13805 IPR003815 S-ribosylhomocysteinase (LuxS) AU28_RS13805 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AU28_RS13810 IPR006334 Glutamate--cysteine ligase, monofunctional AU28_RS13810 IPR007370 Glutamate--cysteine ligase AU28_RS13815 IPR020143 Uncharacterised protein family, RP436 AU28_RS13815 IPR032816 AU28_RS13815 AU28_RS13815 IPR032818 AU28_RS13815 AU28_RS13820 IPR006439 HAD hydrolase, subfamily IA AU28_RS13820 IPR010976 Beta-phosphoglucomutase hydrolase AU28_RS13820 IPR023198 Phosphoglycolate phosphatase, domain 2 AU28_RS13820 IPR023214 HAD-like domain AU28_RS13840 IPR003751 Carbon storage regulator AU28_RS13845 IPR002318 Alanine-tRNA ligase, class IIc AU28_RS13845 IPR003156 DHHA1 domain AU28_RS13845 IPR009000 Translation protein, beta-barrel domain AU28_RS13845 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AU28_RS13845 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain AU28_RS13845 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain AU28_RS13845 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AU28_RS13845 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AU28_RS13850 IPR003783 Regulatory protein RecX AU28_RS13850 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13855 IPR003593 AAA+ ATPase domain AU28_RS13855 IPR013765 DNA recombination and repair protein RecA AU28_RS13855 IPR020584 DNA recombination/repair protein RecA, conserved site AU28_RS13855 IPR023400 DNA recombination and repair protein RecA, C-terminal AU28_RS13855 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13860 IPR008136 CinA, C-terminal AU28_RS13865 IPR011757 Lytic transglycosylase MltB AU28_RS13865 IPR023346 Lysozyme-like domain AU28_RS13865 IPR031304 AU28_RS13865 AU28_RS13870 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor AU28_RS13875 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II AU28_RS13875 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal AU28_RS13875 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal AU28_RS13880 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component AU28_RS13885 IPR002347 Glucose/ribitol dehydrogenase AU28_RS13885 IPR016040 NAD(P)-binding domain AU28_RS13885 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS13890 IPR009693 Glucitol operon activator AU28_RS13900 IPR001034 HTH DeoR N-terminal domain AU28_RS13900 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS13900 IPR014036 DeoR C-terminal sensor domain AU28_RS13900 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS13905 IPR000644 CBS domain AU28_RS13905 IPR001347 Sugar isomerase (SIS) AU28_RS13905 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type AU28_RS13910 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS13910 IPR003018 GAF domain AU28_RS13910 IPR003593 AAA+ ATPase domain AU28_RS13910 IPR009057 Homeodomain-like AU28_RS13910 IPR023944 Anaerobic nitric oxide reductase transcription regulator AU28_RS13910 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AU28_RS13910 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS13910 IPR025944 Sigma-54 interaction domain, conserved site AU28_RS13910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13910 IPR029016 GAF domain-like AU28_RS13915 IPR001279 Beta-lactamase-like AU28_RS13915 IPR004039 Rubredoxin-type fold AU28_RS13915 IPR008254 Flavodoxin/nitric oxide synthase AU28_RS13915 IPR016440 Rubredoxin-oxygen oxidoreductase AU28_RS13915 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin AU28_RS13915 IPR024935 Rubredoxin domain AU28_RS13915 IPR029039 Flavoprotein-like AU28_RS13920 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS13920 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase AU28_RS13925 IPR001792 Acylphosphatase-like domain AU28_RS13925 IPR004421 Carbamoyltransferase, HypF-type AU28_RS13925 IPR006070 YrdC-like domain AU28_RS13925 IPR011125 Zinc finger, HypF-type AU28_RS13925 IPR017945 DHBP synthase RibB-like alpha/beta domain AU28_RS13925 IPR017968 Acylphosphatase, conserved site AU28_RS13930 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS13930 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS13940 IPR000671 Peptidase A31 family AU28_RS13940 IPR004420 Peptidase A31, hydrogenase maturation protease HycI AU28_RS13940 IPR023430 Peptidase HybD-like domain AU28_RS13945 IPR010005 Formate hydrogenlyase maturation HycH AU28_RS13950 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AU28_RS13950 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit AU28_RS13955 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS13955 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS13960 IPR001135 NADH-quinone oxidoreductase, subunit D AU28_RS13960 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit AU28_RS13960 IPR001501 Nickel-dependent hydrogenase, large subunit AU28_RS13960 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site AU28_RS13960 IPR029014 NiFe hydrogenase-like AU28_RS13965 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H AU28_RS13965 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site AU28_RS13970 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase AU28_RS13975 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS13975 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS13980 IPR021285 Transcription regulator, HycA AU28_RS13985 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF AU28_RS13985 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site AU28_RS13990 IPR003495 CobW/HypB/UreG domain AU28_RS13990 IPR004392 Hydrogenase accessory protein HypB AU28_RS13990 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS13995 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AU28_RS13995 IPR019812 Hydrogenase assembly chaperone, conserved site AU28_RS14000 IPR002780 Hydrogenase formation HypD protein AU28_RS14005 IPR010918 AIR synthase-related protein, C-terminal domain AU28_RS14005 IPR011854 Hydrogenase expression/formation protein HypE AU28_RS14005 IPR016188 PurM, N-terminal-like AU28_RS14010 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS14010 IPR002197 DNA binding HTH domain, Fis-type AU28_RS14010 IPR003018 GAF domain AU28_RS14010 IPR003593 AAA+ ATPase domain AU28_RS14010 IPR009057 Homeodomain-like AU28_RS14010 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AU28_RS14010 IPR025944 Sigma-54 interaction domain, conserved site AU28_RS14010 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14010 IPR029016 GAF domain-like AU28_RS14015 IPR020483 Uncharacterised protein family YgbA AU28_RS14020 IPR006127 Periplasmic solute binding protein family AU28_RS14020 IPR006128 Adhesion lipoprotein AU28_RS14020 IPR006129 Adhesin B AU28_RS14025 IPR003439 ABC transporter-like AU28_RS14025 IPR003593 AAA+ ATPase domain AU28_RS14025 IPR017871 ABC transporter, conserved site AU28_RS14025 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14030 IPR001626 ABC-3 AU28_RS14030 IPR029022 ABC transporter, BtuC-like AU28_RS14035 IPR001626 ABC-3 AU28_RS14035 IPR029022 ABC transporter, BtuC-like AU28_RS14040 IPR005083 Serine/Threonine acetyltransferase, YopJ AU28_RS14045 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS14050 IPR009057 Homeodomain-like AU28_RS14050 IPR018060 DNA binding HTH domain, AraC-type AU28_RS14050 IPR018062 HTH domain AraC-type, conserved site AU28_RS14050 IPR020449 Transcription regulator HTH, AraC- type AU28_RS14065 IPR013388 Type III secretion apparatus protein OrgA/MxiK AU28_RS14070 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ AU28_RS14070 IPR006182 Secretory protein YscJ/FliF AU28_RS14080 IPR011841 Type III secretion system, needle protein AU28_RS14080 IPR021123 Type III secretion, needle-protein-like AU28_RS14085 IPR013387 Type III secretion system, PrgH/EprH AU28_RS14085 IPR019029 Type III secretion system, PrgH/EprH-like AU28_RS14090 IPR009057 Homeodomain-like AU28_RS14090 IPR018060 DNA binding HTH domain, AraC-type AU28_RS14090 IPR018062 HTH domain AraC-type, conserved site AU28_RS14090 IPR020449 Transcription regulator HTH, AraC- type AU28_RS14095 IPR001867 Signal transduction response regulator, C-terminal AU28_RS14095 IPR011990 Tetratricopeptide-like helical domain AU28_RS14095 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS14095 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS14100 IPR008258 Lytic transglycosylase-like SLT domain AU28_RS14100 IPR023346 Lysozyme-like domain AU28_RS14105 IPR000242 Protein-tyrosine phosphatase, receptor/non-receptor type AU28_RS14105 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH AU28_RS14105 IPR003595 Protein-tyrosine phosphatase, catalytic AU28_RS14105 IPR011070 Globular protein, non-globular alpha/beta subunit AU28_RS14105 IPR014773 Virulence factor YopE uncharacterised domain AU28_RS14105 IPR015203 SicP binding AU28_RS14105 IPR016130 Protein-tyrosine phosphatase, active site AU28_RS14105 IPR029021 Protein-tyrosine phosphatase-like AU28_RS14110 IPR010261 Tir chaperone protein (CesT) family AU28_RS14120 IPR003231 Acyl carrier protein (ACP) AU28_RS14120 IPR009081 Acyl carrier protein-like AU28_RS14125 IPR015138 Salmonella invasion protein A AU28_RS14125 IPR023224 Salmonella invasion protein A, C-terminal actin-binding domain AU28_RS14125 IPR023225 Salmonella invasion protein A, chaperone-binding AU28_RS14130 IPR009483 Invasion plasmid antigen IpaD AU28_RS14130 IPR013386 Type III effector protein IpaD/SipD/SspD AU28_RS14135 IPR005427 Salmonella/Shigella invasin protein C AU28_RS14140 IPR003895 Type III secretion system, invasin protein B AU28_RS14140 IPR006972 Secretion system effector C, SseC-like AU28_RS14140 IPR032391 AU28_RS14140 AU28_RS14145 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AU28_RS14145 IPR011716 Tetratricopeptide TPR-3 AU28_RS14145 IPR011990 Tetratricopeptide-like helical domain AU28_RS14145 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup AU28_RS14150 IPR006135 Type III secretion system substrate exporter AU28_RS14150 IPR006307 Type III exporter system, secretion apparatus protein BsaZ AU28_RS14150 IPR029025 Type III secretion system substrate exporter, C-terminal AU28_RS14155 IPR002010 Type III secretion system inner membrane R protein AU28_RS14155 IPR006304 Type III secretion protein SpaR/YscT AU28_RS14160 IPR002191 Bacterial export protein family 3 AU28_RS14160 IPR006306 Type III secretion protein HrpO AU28_RS14165 IPR005773 Yop virulence translocation protein R AU28_RS14165 IPR005838 Type III secretion system inner membrane P protein AU28_RS14170 IPR001543 Surface presentation of antigen (SpoA) AU28_RS14170 IPR003283 Type III secretion system outer membrane, SpaO AU28_RS14170 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO AU28_RS14175 IPR003066 Salmonella invasion protein InvJ AU28_RS14180 IPR002954 Salmonella surface presentation of antigen M protein AU28_RS14185 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AU28_RS14185 IPR003593 AAA+ ATPase domain AU28_RS14185 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain AU28_RS14185 IPR005714 ATPase, type III secretion system, FliI/YscN AU28_RS14185 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AU28_RS14185 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14185 IPR032463 AU28_RS14185 AU28_RS14190 IPR003065 Surface presentation of antigens protein SpaK AU28_RS14195 IPR001712 Type III secretion system FHIPEP AU28_RS14195 IPR006302 Type III secretion protein HrcV AU28_RS14195 IPR025505 FHIPEP conserved site AU28_RS14200 IPR003520 Salmonella/Shigella invasion protein E AU28_RS14200 IPR010812 Hypersensitivity response secretion-like, HrpJ AU28_RS14200 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC AU28_RS14205 IPR003522 Type III secretion system outer membrane pore YscC/HrcC AU28_RS14205 IPR004845 Type II secretion system GspD, conserved site AU28_RS14205 IPR004846 Type II/III secretion system AU28_RS14205 IPR005644 NolW-like AU28_RS14210 IPR009057 Homeodomain-like AU28_RS14210 IPR018060 DNA binding HTH domain, AraC-type AU28_RS14210 IPR018062 HTH domain AraC-type, conserved site AU28_RS14215 IPR006830 InvH outer membrane lipoprotein AU28_RS14220 IPR010985 Ribbon-helix-helix AU28_RS14220 IPR014795 Vibrio phage ICP1, Orf50 AU28_RS14225 IPR000182 GNAT domain AU28_RS14225 IPR016181 Acyl-CoA N-acyltransferase AU28_RS14235 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AU28_RS14235 IPR029052 Metallo-dependent phosphatase-like AU28_RS14255 IPR000432 DNA mismatch repair protein MutS, C-terminal AU28_RS14255 IPR005748 DNA mismatch repair protein MutS, type 1 AU28_RS14255 IPR007695 DNA mismatch repair protein MutS-like, N-terminal AU28_RS14255 IPR007696 DNA mismatch repair protein MutS, core AU28_RS14255 IPR007860 DNA mismatch repair protein MutS, connector domain AU28_RS14255 IPR007861 DNA mismatch repair protein MutS, clamp AU28_RS14255 IPR016151 DNA mismatch repair protein MutS, N-terminal AU28_RS14255 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14260 IPR016918 Uncharacterised conserved protein UCP029394 AU28_RS14260 IPR027843 Domain of unknown function DUF4440 AU28_RS14260 IPR032710 AU28_RS14260 AU28_RS14265 IPR005829 Sugar transporter, conserved site AU28_RS14265 IPR011701 Major facilitator superfamily AU28_RS14265 IPR020846 Major facilitator superfamily domain AU28_RS14270 IPR000847 Transcription regulator HTH, LysR AU28_RS14270 IPR005119 LysR, substrate-binding AU28_RS14270 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS14275 IPR003474 Gluconate transporter AU28_RS14280 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AU28_RS14280 IPR016040 NAD(P)-binding domain AU28_RS14285 IPR013022 Xylose isomerase-like, TIM barrel domain AU28_RS14285 IPR026040 Hydroxypyruvate isomerase-like AU28_RS14290 IPR001303 Class II aldolase/adducin N-terminal AU28_RS14295 IPR010737 Protein of unknown function, DUF1537 AU28_RS14295 IPR031475 AU28_RS14295 AU28_RS14300 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AU28_RS14300 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AU28_RS14300 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS14300 IPR013328 Dehydrogenase, multihelical AU28_RS14300 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type AU28_RS14300 IPR016040 NAD(P)-binding domain AU28_RS14300 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AU28_RS14305 IPR001034 HTH DeoR N-terminal domain AU28_RS14305 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS14305 IPR014036 DeoR C-terminal sensor domain AU28_RS14305 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS14310 IPR000835 MarR-type HTH domain AU28_RS14310 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS14310 IPR023187 Transcriptional regulator MarR-type, conserved site AU28_RS14315 IPR003382 Flavoprotein AU28_RS14315 IPR004507 Decarboxylase UbiX/Pad1 AU28_RS14315 IPR032901 AU28_RS14315 AU28_RS14320 IPR002830 UbiD decarboxylyase family AU28_RS14320 IPR012349 FMN-binding split barrel AU28_RS14320 IPR032902 AU28_RS14320 AU28_RS14330 IPR000943 RNA polymerase sigma-70 AU28_RS14330 IPR007624 RNA polymerase sigma-70 region 3 AU28_RS14330 IPR007627 RNA polymerase sigma-70 region 2 AU28_RS14330 IPR007630 RNA polymerase sigma-70 region 4 AU28_RS14330 IPR009042 RNA polymerase sigma-70 region 1.2 AU28_RS14330 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS14330 IPR012761 RNA polymerase sigma factor RpoS AU28_RS14330 IPR013324 RNA polymerase sigma factor, region 3/4 AU28_RS14330 IPR013325 RNA polymerase sigma factor, region 2 AU28_RS14330 IPR014284 RNA polymerase sigma-70 like domain AU28_RS14335 IPR011055 Duplicated hybrid motif AU28_RS14335 IPR016047 Peptidase M23 AU28_RS14335 IPR018392 LysM domain AU28_RS14340 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AU28_RS14340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS14345 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AU28_RS14345 IPR030048 AU28_RS14345 AU28_RS14350 IPR001656 Pseudouridine synthase, TruD AU28_RS14350 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS14350 IPR020119 Pseudouridine synthase TruD, conserved site AU28_RS14355 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase AU28_RS14355 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site AU28_RS14360 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AU28_RS14360 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site AU28_RS14360 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS14365 IPR007060 Septum formation initiator FtsL/DivIC AU28_RS14365 IPR023081 Cell division protein FtsB AU28_RS14370 IPR022721 Protein of unknown function DUF3561 AU28_RS14375 IPR002891 Adenylylsulphate kinase AU28_RS14375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14380 IPR000795 Elongation factor, GTP-binding domain AU28_RS14380 IPR005225 Small GTP-binding protein domain AU28_RS14380 IPR009000 Translation protein, beta-barrel domain AU28_RS14380 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AU28_RS14380 IPR011779 Sulphate adenylyltransferase, large subunit AU28_RS14380 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14380 IPR031157 AU28_RS14380 AU28_RS14385 IPR002500 Phosphoadenosine phosphosulphate reductase AU28_RS14385 IPR011784 Sulphate adenylyltransferase, small subunit AU28_RS14385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS14390 IPR007484 Peptidase M28 AU28_RS14395 IPR010152 CRISPR-associated protein Cas2 subtype AU28_RS14400 IPR002729 CRISPR-associated protein Cas1 AU28_RS14400 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype AU28_RS14405 IPR010179 CRISPR-associated protein Cse3 AU28_RS14410 IPR010147 CRISPR-associated protein, CasD AU28_RS14410 IPR013422 CRISPR-associated protein Cas5, N-terminal AU28_RS14410 IPR021124 CRISPR-associated protein, Cas5 AU28_RS14415 IPR010148 CRISPR-associated protein, CT1975 AU28_RS14420 IPR013382 CRISPR-associated protein Cse2 AU28_RS14425 IPR013381 CRISPR-associated protein Cse1 AU28_RS14430 IPR006474 Helicase Cas3, CRISPR-associated, core AU28_RS14430 IPR006483 CRISPR-associated Cas3-HD domain AU28_RS14430 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS14430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14435 IPR022747 Salmonella outer protein D AU28_RS14440 IPR002500 Phosphoadenosine phosphosulphate reductase AU28_RS14440 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase AU28_RS14440 IPR011800 Phosphoadenosine phosphosulphate reductase CysH AU28_RS14440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS14445 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AU28_RS14445 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site AU28_RS14445 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AU28_RS14445 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit AU28_RS14450 IPR001094 Flavodoxin AU28_RS14450 IPR001433 Oxidoreductase FAD/NAD(P)-binding AU28_RS14450 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AU28_RS14450 IPR003097 FAD-binding, type 1 AU28_RS14450 IPR008254 Flavodoxin/nitric oxide synthase AU28_RS14450 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AU28_RS14450 IPR017938 Riboflavin synthase-like beta-barrel AU28_RS14450 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 AU28_RS14450 IPR029039 Flavoprotein-like AU28_RS14450 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AU28_RS14455 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein AU28_RS14460 IPR001279 Beta-lactamase-like AU28_RS14465 IPR007197 Radical SAM AU28_RS14465 IPR013785 Aldolase-type TIM barrel AU28_RS14465 IPR024924 7-carboxy-7-deazaguanine synthase-like AU28_RS14465 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria AU28_RS14470 IPR000941 Enolase AU28_RS14470 IPR020809 Enolase, conserved site AU28_RS14470 IPR020810 Enolase, C-terminal AU28_RS14470 IPR020811 Enolase, N-terminal AU28_RS14470 IPR029017 Enolase N-terminal domain-like AU28_RS14470 IPR029065 Enolase C-terminal domain-like AU28_RS14475 IPR004468 CTP synthase AU28_RS14475 IPR017456 CTP synthase, N-terminal AU28_RS14475 IPR017926 Glutamine amidotransferase AU28_RS14475 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14475 IPR029062 Class I glutamine amidotransferase-like AU28_RS14480 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AU28_RS14480 IPR011551 NTP pyrophosphohydrolase MazG, bacterial AU28_RS14485 IPR000259 Fimbrial-type adhesion domain AU28_RS14485 IPR008966 Adhesion domain AU28_RS14490 IPR000015 Outer membrane usher protein AU28_RS14490 IPR018030 Fimbrial membrane usher, conserved site AU28_RS14490 IPR025885 PapC, N-terminal domain AU28_RS14490 IPR025949 PapC-like, C-terminal domain AU28_RS14495 IPR001829 Pili assembly chaperone, bacterial AU28_RS14495 IPR008962 PapD-like AU28_RS14495 IPR016147 PapD, N-terminal, bacterial AU28_RS14495 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS14495 IPR018046 Pili assembly chaperone, conserved site AU28_RS14500 IPR000259 Fimbrial-type adhesion domain AU28_RS14500 IPR008966 Adhesion domain AU28_RS14505 IPR000259 Fimbrial-type adhesion domain AU28_RS14505 IPR008966 Adhesion domain AU28_RS14510 IPR000259 Fimbrial-type adhesion domain AU28_RS14510 IPR008966 Adhesion domain AU28_RS14520 IPR002912 ACT domain AU28_RS14520 IPR003607 HD/PDEase domain AU28_RS14520 IPR004095 TGS AU28_RS14520 IPR004811 RelA/SpoT family AU28_RS14520 IPR007685 RelA/SpoT AU28_RS14520 IPR012675 Beta-grasp domain AU28_RS14520 IPR012676 TGS-like AU28_RS14525 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD AU28_RS14525 IPR002792 TRAM domain AU28_RS14525 IPR010280 (Uracil-5)-methyltransferase family AU28_RS14525 IPR012340 Nucleic acid-binding, OB-fold AU28_RS14525 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS14525 IPR030390 AU28_RS14525 AU28_RS14525 IPR030391 AU28_RS14525 AU28_RS14530 IPR001789 Signal transduction response regulator, receiver domain AU28_RS14530 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS14530 IPR003660 HAMP linker domain AU28_RS14530 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS14530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS14530 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AU28_RS14530 IPR011006 CheY-like superfamily AU28_RS14530 IPR019247 Histidine kinase BarA, N-terminal AU28_RS14535 IPR004381 Glycerate kinase AU28_RS14535 IPR018193 Glycerate kinase, flavodoxin-like domain AU28_RS14540 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS14540 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS14540 IPR017653 Glucarate dehydratase AU28_RS14540 IPR029017 Enolase N-terminal domain-like AU28_RS14540 IPR029065 Enolase C-terminal domain-like AU28_RS14545 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS14545 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AU28_RS14545 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS14545 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AU28_RS14545 IPR029017 Enolase N-terminal domain-like AU28_RS14545 IPR029065 Enolase C-terminal domain-like AU28_RS14550 IPR000849 Sugar phosphate transporter AU28_RS14550 IPR004744 D-galactonate transporter AU28_RS14550 IPR011701 Major facilitator superfamily AU28_RS14550 IPR020846 Major facilitator superfamily domain AU28_RS14555 IPR001094 Flavodoxin AU28_RS14555 IPR008254 Flavodoxin/nitric oxide synthase AU28_RS14555 IPR029039 Flavoprotein-like AU28_RS14560 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AU28_RS14560 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AU28_RS14560 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS14565 IPR007384 Protein of unknown function UCP006257 AU28_RS14565 IPR023376 YqcC-like domain AU28_RS14570 IPR009948 Syd AU28_RS14575 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 AU28_RS14575 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal AU28_RS14575 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF AU28_RS14580 IPR021826 Protein of unknown function DUF3412 AU28_RS14580 IPR027820 Domain of unknown function DUF4478 AU28_RS14580 IPR031100 AU28_RS14580 AU28_RS14585 IPR004694 Hydroxy amino acid transporter AU28_RS14590 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AU28_RS14590 IPR005130 Serine dehydratase-like, alpha subunit AU28_RS14590 IPR005131 Serine dehydratase beta chain AU28_RS14590 IPR029009 Allosteric substrate binding domain AU28_RS14595 IPR002421 5'-3' exonuclease, N-terminal AU28_RS14595 IPR008918 Helix-hairpin-helix motif, class 2 AU28_RS14595 IPR020045 5'-3' exonuclease, C-terminal domain AU28_RS14595 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AU28_RS14595 IPR022895 Flap endonuclease Xni AU28_RS14595 IPR029060 PIN domain-like AU28_RS14600 IPR001670 Alcohol dehydrogenase, iron-type AU28_RS14600 IPR013460 Lactaldehyde reductase AU28_RS14600 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AU28_RS14605 IPR001303 Class II aldolase/adducin N-terminal AU28_RS14605 IPR004782 L-fucose phosphate aldolase AU28_RS14610 IPR005275 L-fucose permease FucP AU28_RS14610 IPR011701 Major facilitator superfamily AU28_RS14610 IPR020846 Major facilitator superfamily domain AU28_RS14615 IPR004216 L-fucose/L-arabinose isomerase, C-terminal AU28_RS14615 IPR005763 L-fucose isomerase AU28_RS14615 IPR009015 L-fucose isomerase, N-terminal/central domain AU28_RS14615 IPR012888 L-fucose isomerase, N-terminal-1 AU28_RS14615 IPR012889 L-fucose isomerase, N-terminal-2 AU28_RS14615 IPR015888 L-fucose isomerase, C-terminal AU28_RS14620 IPR000577 AU28_RS14620 AU28_RS14620 IPR013450 L-fuculokinase AU28_RS14620 IPR018483 Carbohydrate kinase, FGGY, conserved site AU28_RS14620 IPR018484 Carbohydrate kinase, FGGY, N-terminal AU28_RS14620 IPR018485 Carbohydrate kinase, FGGY, C-terminal AU28_RS14625 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU AU28_RS14625 IPR023750 RbsD-like domain AU28_RS14625 IPR023751 L-fucose mutarotase AU28_RS14630 IPR001034 HTH DeoR N-terminal domain AU28_RS14630 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS14630 IPR014036 DeoR C-terminal sensor domain AU28_RS14630 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS14635 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AU28_RS14635 IPR011224 Ribosomal RNA large subunit methyltransferase M AU28_RS14635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS14640 IPR006696 Protein of unknown function DUF423 AU28_RS14645 IPR000847 Transcription regulator HTH, LysR AU28_RS14645 IPR005119 LysR, substrate-binding AU28_RS14645 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS14650 IPR010305 Protein of unknown function DUF903 AU28_RS14650 IPR010920 Like-Sm (LSM) domain AU28_RS14655 IPR000192 Aminotransferase class V domain AU28_RS14655 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS14655 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS14655 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS14655 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site AU28_RS14655 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA AU28_RS14660 IPR003808 Fe-S metabolism associated domain, SufE-like AU28_RS14660 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE AU28_RS14665 IPR000620 Drug/metabolite transporter AU28_RS14665 IPR004626 RarD protein AU28_RS14670 IPR000594 UBA/THIF-type NAD/FAD binding fold AU28_RS14670 IPR016040 NAD(P)-binding domain AU28_RS14675 IPR005300 Lytic transglycosylase MltA AU28_RS14675 IPR009009 RlpA-like double-psi beta-barrel domain AU28_RS14675 IPR010611 3D domain AU28_RS14690 IPR002508 Cell wall hydrolase/autolysin, catalytic AU28_RS14690 IPR021731 AMIN domain AU28_RS14695 IPR000182 GNAT domain AU28_RS14695 IPR001048 Aspartate/glutamate/uridylate kinase AU28_RS14695 IPR010167 Amino-acid N-acetyltransferase (ArgA) AU28_RS14695 IPR016181 Acyl-CoA N-acyltransferase AU28_RS14700 IPR003593 AAA+ ATPase domain AU28_RS14700 IPR006344 Exodeoxyribonuclease V, alpha subunit AU28_RS14700 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14700 IPR027785 UvrD-like helicase C-terminal domain AU28_RS14705 IPR000212 DNA helicase, UvrD/REP type AU28_RS14705 IPR004586 Exodeoxyribonuclease V, beta subunit AU28_RS14705 IPR011335 Restriction endonuclease type II-like AU28_RS14705 IPR011604 Exonuclease, phage-type/RecB, C-terminal AU28_RS14705 IPR014016 UvrD-like Helicase, ATP-binding domain AU28_RS14705 IPR014017 DNA helicase, UvrD-like, C-terminal AU28_RS14705 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14710 IPR001431 Peptidase M16, zinc-binding site AU28_RS14710 IPR007863 Peptidase M16, C-terminal domain AU28_RS14710 IPR011237 Peptidase M16 domain AU28_RS14710 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AU28_RS14710 IPR011765 Peptidase M16, N-terminal AU28_RS14710 IPR032632 AU28_RS14710 AU28_RS14715 IPR006697 Exodeoxyribonuclease V, gamma subunit AU28_RS14715 IPR011335 Restriction endonuclease type II-like AU28_RS14715 IPR013986 DExx box DNA helicase domain AU28_RS14715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS14720 IPR012902 Prokaryotic N-terminal methylation site AU28_RS14720 IPR022204 Prepilin peptidase dependent protein C AU28_RS14725 IPR019652 Protein of unknown function DUF2509 AU28_RS14730 IPR012902 Prokaryotic N-terminal methylation site AU28_RS14730 IPR016419 Prepilin peptidase-dependent protein B, predicted AU28_RS14735 IPR012902 Prokaryotic N-terminal methylation site AU28_RS14745 IPR000398 Thymidylate synthase AU28_RS14745 IPR020940 Thymidylate synthase, active site AU28_RS14745 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain AU28_RS14750 IPR001640 Prolipoprotein diacylglyceryl transferase AU28_RS14755 IPR000121 PEP-utilising enzyme, C-terminal AU28_RS14755 IPR003018 GAF domain AU28_RS14755 IPR006318 Phosphoenolpyruvate-utilising enzyme AU28_RS14755 IPR008279 PEP-utilising enzyme, mobile domain AU28_RS14755 IPR008731 Phosphotransferase system, enzyme I N-terminal AU28_RS14755 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS14755 IPR018274 PEP-utilising enzyme, active site AU28_RS14755 IPR023151 PEP-utilising enzyme, conserved site AU28_RS14755 IPR029016 GAF domain-like AU28_RS14760 IPR000086 NUDIX hydrolase domain AU28_RS14760 IPR015797 NUDIX hydrolase domain-like AU28_RS14760 IPR020084 NUDIX hydrolase, conserved site AU28_RS14760 IPR020476 NUDIX hydrolase AU28_RS14760 IPR022927 RNA pyrophosphohydrolase RppH AU28_RS14770 IPR004230 DNA mismatch repair protein MutH AU28_RS14770 IPR011335 Restriction endonuclease type II-like AU28_RS14770 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II AU28_RS14775 IPR005496 Integral membrane protein TerC AU28_RS14780 IPR010305 Protein of unknown function DUF903 AU28_RS14780 IPR010920 Like-Sm (LSM) domain AU28_RS14785 IPR001395 Aldo/keto reductase AU28_RS14785 IPR020471 Aldo/keto reductase subgroup AU28_RS14785 IPR023210 NADP-dependent oxidoreductase domain AU28_RS14790 IPR011701 Major facilitator superfamily AU28_RS14790 IPR020846 Major facilitator superfamily domain AU28_RS14790 IPR023727 Lysophospholipid transporter LplT AU28_RS14795 IPR000873 AMP-dependent synthetase/ligase AU28_RS14795 IPR002123 Phospholipid/glycerol acyltransferase AU28_RS14795 IPR020845 AMP-binding, conserved site AU28_RS14795 IPR023775 Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl synthetase Aas AU28_RS14800 IPR000843 Transcription regulator HTH, LacI AU28_RS14800 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS14800 IPR028082 Periplasmic binding protein-like I AU28_RS14805 IPR000843 Transcription regulator HTH, LacI AU28_RS14805 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS14805 IPR028082 Periplasmic binding protein-like I AU28_RS14810 IPR000183 Ornithine/DAP/Arg decarboxylase AU28_RS14810 IPR002986 Diaminopimelate decarboxylase, LysA AU28_RS14810 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AU28_RS14810 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AU28_RS14810 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AU28_RS14810 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AU28_RS14810 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AU28_RS14810 IPR029066 PLP-binding barrel AU28_RS14815 IPR000847 Transcription regulator HTH, LysR AU28_RS14815 IPR005119 LysR, substrate-binding AU28_RS14815 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS14820 IPR001920 Asp/Glu racemase AU28_RS14820 IPR004380 Aspartate racemase AU28_RS14820 IPR015942 Asp/Glu/hydantoin racemase AU28_RS14820 IPR033134 AU28_RS14820 AU28_RS14825 IPR003663 Sugar/inositol transporter AU28_RS14825 IPR005828 General substrate transporter AU28_RS14825 IPR005829 Sugar transporter, conserved site AU28_RS14825 IPR020846 Major facilitator superfamily domain AU28_RS14830 IPR002347 Glucose/ribitol dehydrogenase AU28_RS14830 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase AU28_RS14830 IPR016040 NAD(P)-binding domain AU28_RS14830 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS14835 IPR007045 5-keto 4-deoxyuronate isomerase AU28_RS14835 IPR011051 RmlC-like cupin domain AU28_RS14835 IPR021120 KduI/IolB isomerase AU28_RS14835 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain AU28_RS14835 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain AU28_RS14840 IPR002155 Thiolase AU28_RS14840 IPR016039 Thiolase-like AU28_RS14840 IPR020610 Thiolase, active site AU28_RS14840 IPR020613 Thiolase, conserved site AU28_RS14840 IPR020615 Thiolase, acyl-enzyme intermediate active site AU28_RS14840 IPR020616 Thiolase, N-terminal AU28_RS14840 IPR020617 Thiolase, C-terminal AU28_RS14845 IPR000847 Transcription regulator HTH, LysR AU28_RS14845 IPR005119 LysR, substrate-binding AU28_RS14845 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS14850 IPR007896 Transmembrane pair, bacterial AU28_RS14855 IPR018227 Tryptophan/tyrosine permease AU28_RS14860 IPR003735 Metal-sensitive transcriptional repressor AU28_RS14865 IPR011541 Nickel/cobalt transporter, high-affinity AU28_RS14875 IPR020357 Transcription regulator CaiF AU28_RS14880 IPR000259 Fimbrial-type adhesion domain AU28_RS14880 IPR008966 Adhesion domain AU28_RS14885 IPR001829 Pili assembly chaperone, bacterial AU28_RS14885 IPR008962 PapD-like AU28_RS14885 IPR016147 PapD, N-terminal, bacterial AU28_RS14885 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS14885 IPR018046 Pili assembly chaperone, conserved site AU28_RS14890 IPR000015 Outer membrane usher protein AU28_RS14890 IPR018030 Fimbrial membrane usher, conserved site AU28_RS14890 IPR025885 PapC, N-terminal domain AU28_RS14890 IPR025949 PapC-like, C-terminal domain AU28_RS14895 IPR000259 Fimbrial-type adhesion domain AU28_RS14895 IPR008966 Adhesion domain AU28_RS14900 IPR021236 Uncharacterised protein family YfdX AU28_RS14905 IPR000758 Virulence-related outer membrane protein AU28_RS14905 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AU28_RS14905 IPR027385 Outer membrane protein beta-barrel AU28_RS14910 IPR002716 PIN domain AU28_RS14910 IPR022907 VapC family AU28_RS14910 IPR029060 PIN domain-like AU28_RS14925 IPR010846 Protein of unknown function DUF1460 AU28_RS14925 IPR023360 Putative xylanase-like C-terminal AU28_RS14935 IPR011055 Duplicated hybrid motif AU28_RS14935 IPR016047 Peptidase M23 AU28_RS14935 IPR018392 LysM domain AU28_RS14940 IPR000086 NUDIX hydrolase domain AU28_RS14940 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 AU28_RS14940 IPR015797 NUDIX hydrolase domain-like AU28_RS14945 IPR002313 Lysine-tRNA ligase, class II AU28_RS14945 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AU28_RS14945 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AU28_RS14945 IPR012340 Nucleic acid-binding, OB-fold AU28_RS14945 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AU28_RS14945 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like AU28_RS14950 IPR000352 Peptide chain release factor class I/class II AU28_RS14950 IPR004374 Peptide chain release factor 2 AU28_RS14950 IPR005139 Peptide chain release factor AU28_RS14950 IPR014720 Double-stranded RNA-binding domain AU28_RS14955 IPR001667 DDH domain AU28_RS14955 IPR003156 DHHA1 domain AU28_RS14955 IPR004610 Bacterial RecJ exonuclease AU28_RS14960 IPR009094 Disulphide bond isomerase, DsbC, N-terminal AU28_RS14960 IPR012336 Thioredoxin-like fold AU28_RS14960 IPR017937 Thioredoxin, conserved site AU28_RS14960 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AU28_RS14965 IPR002104 Integrase, catalytic AU28_RS14965 IPR004107 Integrase, SAM-like, N-terminal AU28_RS14965 IPR010998 Integrase, Lambda-type, N-terminal AU28_RS14965 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS14965 IPR011932 Tyrosine recombinase XerD AU28_RS14965 IPR013762 Integrase-like, catalytic core AU28_RS14965 IPR023009 Tyrosine recombinase XerC/XerD AU28_RS14965 IPR023109 Integrase/recombinase, N-terminal AU28_RS14970 IPR001226 Flavodoxin, conserved site AU28_RS14970 IPR008254 Flavodoxin/nitric oxide synthase AU28_RS14970 IPR010086 Flavodoxin, long chain AU28_RS14970 IPR029039 Flavoprotein-like AU28_RS14975 IPR009883 Protein of unknown function DUF1434 AU28_RS14980 IPR005631 Flavinator of succinate dehydrogenase AU28_RS14990 IPR006222 Glycine cleavage T-protein, N-terminal AU28_RS14990 IPR017703 YgfZ/GcvT conserved site AU28_RS14990 IPR023758 tRNA-modifying protein YgfZ AU28_RS14990 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AU28_RS14995 IPR004254 Hly-III-related AU28_RS14995 IPR005744 HylII AU28_RS15000 IPR007374 ASCH domain AU28_RS15000 IPR008314 Uncharacterised conserved protein UCP029143 AU28_RS15000 IPR015947 PUA-like domain AU28_RS15005 IPR001360 Glycoside hydrolase, family 1 AU28_RS15005 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS15005 IPR017853 Glycoside hydrolase, superfamily AU28_RS15005 IPR018120 Glycoside hydrolase, family 1, active site AU28_RS15005 IPR033132 AU28_RS15005 AU28_RS15010 IPR025737 MetA-pathway of phenol degradation, putative AU28_RS15015 IPR003437 Glycine cleavage system P protein, homodimeric AU28_RS15015 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS15015 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS15015 IPR020580 Glycine cleavage system P-protein, N-terminal AU28_RS15015 IPR020581 Glycine cleavage system P protein AU28_RS15020 IPR002930 Glycine cleavage system H-protein AU28_RS15020 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AU28_RS15020 IPR011053 Single hybrid motif AU28_RS15020 IPR017453 Glycine cleavage system H-protein, subgroup AU28_RS15025 IPR006222 Glycine cleavage T-protein, N-terminal AU28_RS15025 IPR006223 Glycine cleavage system T protein AU28_RS15025 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AU28_RS15025 IPR022903 Glycine cleavage system T protein, bacteria AU28_RS15025 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AU28_RS15025 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA AU28_RS15025 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AU28_RS15030 IPR002938 Monooxygenase, FAD-binding AU28_RS15030 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 AU28_RS15030 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AU28_RS15030 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS15035 IPR002938 Monooxygenase, FAD-binding AU28_RS15035 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 AU28_RS15035 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase AU28_RS15035 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AU28_RS15035 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS15040 IPR000994 Peptidase M24, structural domain AU28_RS15040 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AU28_RS15040 IPR001714 Peptidase M24, methionine aminopeptidase AU28_RS15040 IPR007865 Aminopeptidase P, N-terminal AU28_RS15040 IPR028980 Creatinase/Aminopeptidase P, N-terminal AU28_RS15040 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AU28_RS15045 IPR011978 Uncharacterised protein family UPF0149 AU28_RS15050 IPR007838 Cell division protein ZapA-like AU28_RS15050 IPR023771 Cell division protein ZapA, eubacteria AU28_RS15055 IPR002698 5-formyltetrahydrofolate cyclo-ligase AU28_RS15055 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AU28_RS15060 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AU28_RS15060 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AU28_RS15060 IPR016040 NAD(P)-binding domain AU28_RS15060 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 AU28_RS15060 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AU28_RS15060 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AU28_RS15065 IPR004788 Ribose 5-phosphate isomerase, type A AU28_RS15065 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup AU28_RS15070 IPR000847 Transcription regulator HTH, LysR AU28_RS15070 IPR005119 LysR, substrate-binding AU28_RS15070 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS15070 IPR017685 Transcription regulator ArgP AU28_RS15070 IPR023490 Chromosome initiation inhibitor AU28_RS15075 IPR007497 Protein of unknown function DUF541 AU28_RS15080 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AU28_RS15080 IPR004777 L-lysine exporter/arginine exporter AU28_RS15080 IPR023445 Arginine exporter protein ArgO, enterobacteria AU28_RS15085 IPR006685 Mechanosensitive ion channel MscS AU28_RS15085 IPR006686 Mechanosensitive ion channel MscS, conserved site AU28_RS15085 IPR008910 Conserved TM helix AU28_RS15085 IPR010920 Like-Sm (LSM) domain AU28_RS15085 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AU28_RS15085 IPR011066 Mechanosensitive ion channel MscS, C-terminal AU28_RS15090 IPR000771 Ketose-bisphosphate aldolase, class-II AU28_RS15090 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype AU28_RS15090 IPR013785 Aldolase-type TIM barrel AU28_RS15095 IPR001576 Phosphoglycerate kinase AU28_RS15095 IPR015824 Phosphoglycerate kinase, N-terminal AU28_RS15095 IPR015901 Phosphoglycerate kinase, C-terminal AU28_RS15095 IPR015911 Phosphoglycerate kinase, conserved site AU28_RS15100 IPR006422 D-erythrose-4-phosphate dehydrogenase AU28_RS15100 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AU28_RS15100 IPR016040 NAD(P)-binding domain AU28_RS15100 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AU28_RS15100 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AU28_RS15100 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AU28_RS15100 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AU28_RS15105 IPR005175 Domain of unknown function DUF296 AU28_RS15110 IPR024529 ECF transporter, substrate-specific component AU28_RS15115 IPR003339 ABC/ECF transporter, transmembrane component AU28_RS15120 IPR003439 ABC transporter-like AU28_RS15120 IPR003593 AAA+ ATPase domain AU28_RS15120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS15125 IPR003439 ABC transporter-like AU28_RS15125 IPR003593 AAA+ ATPase domain AU28_RS15125 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS15130 IPR005474 Transketolase, N-terminal AU28_RS15130 IPR005475 Transketolase-like, pyrimidine-binding domain AU28_RS15130 IPR005478 Transketolase, bacterial-like AU28_RS15130 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AU28_RS15130 IPR020826 Transketolase binding site AU28_RS15130 IPR029061 Thiamin diphosphate-binding fold AU28_RS15130 IPR033247 AU28_RS15130 AU28_RS15130 IPR033248 AU28_RS15130 AU28_RS15135 IPR001915 Peptidase M48 AU28_RS15140 IPR005925 Agmatinase-related AU28_RS15140 IPR006035 Ureohydrolase AU28_RS15140 IPR020855 Ureohydrolase, manganese-binding site AU28_RS15140 IPR023694 Agmatinase AU28_RS15140 IPR023696 Ureohydrolase domain AU28_RS15145 IPR000073 Alpha/beta hydrolase fold-1 AU28_RS15145 IPR022742 Putative lysophospholipase AU28_RS15145 IPR029058 Alpha/Beta hydrolase fold AU28_RS15150 IPR004375 Conserved hypothetical protein CHP00022 AU28_RS15155 IPR003767 Malate/L-lactate dehydrogenase AU28_RS15160 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS15160 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AU28_RS15160 IPR011032 GroES (chaperonin 10)-like AU28_RS15160 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS15160 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS15160 IPR016040 NAD(P)-binding domain AU28_RS15160 IPR020843 Polyketide synthase, enoylreductase AU28_RS15165 IPR000669 Mannitol dehydrogenase AU28_RS15165 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS15165 IPR013118 Mannitol dehydrogenase, C-terminal AU28_RS15165 IPR013131 Mannitol dehydrogenase, N-terminal AU28_RS15165 IPR013328 Dehydrogenase, multihelical AU28_RS15165 IPR016040 NAD(P)-binding domain AU28_RS15165 IPR023027 Mannitol dehydrogenase, conserved site AU28_RS15170 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AU28_RS15170 IPR029017 Enolase N-terminal domain-like AU28_RS15175 IPR000524 Transcription regulator HTH, GntR AU28_RS15175 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS15175 IPR011711 GntR, C-terminal AU28_RS15175 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS15185 IPR000183 Ornithine/DAP/Arg decarboxylase AU28_RS15185 IPR002985 Arginine decarboxylase AU28_RS15185 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AU28_RS15185 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AU28_RS15185 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AU28_RS15185 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AU28_RS15185 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AU28_RS15185 IPR029066 PLP-binding barrel AU28_RS15190 IPR020196 Uncharacterised protein family YqgB AU28_RS15195 IPR020263 Uncharacterised protein family YqgD AU28_RS15200 IPR002133 S-adenosylmethionine synthetase AU28_RS15200 IPR022628 S-adenosylmethionine synthetase, N-terminal AU28_RS15200 IPR022629 S-adenosylmethionine synthetase, central domain AU28_RS15200 IPR022630 S-adenosylmethionine synthetase, C-terminal AU28_RS15200 IPR022631 S-adenosylmethionine synthetase, conserved site AU28_RS15200 IPR022636 S-adenosylmethionine synthetase superfamily AU28_RS15205 IPR003663 Sugar/inositol transporter AU28_RS15205 IPR005828 General substrate transporter AU28_RS15205 IPR005829 Sugar transporter, conserved site AU28_RS15205 IPR020846 Major facilitator superfamily domain AU28_RS15210 IPR006640 Domain of unknown function SprT-like AU28_RS15210 IPR023483 Uncharacterised protein family SprT AU28_RS15215 IPR007346 Endonuclease I AU28_RS15220 IPR006700 Ribosomal RNA small subunit methyltransferase E AU28_RS15220 IPR015947 PUA-like domain AU28_RS15220 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AU28_RS15220 IPR029028 Alpha/beta knot methyltransferases AU28_RS15225 IPR004215 Prokaryotic glutathione synthetase, N-terminal AU28_RS15225 IPR004218 Prokaryotic glutathione synthetase, ATP-binding AU28_RS15225 IPR006284 Glutathione synthetase, prokaryotic AU28_RS15225 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS15225 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS15225 IPR016185 Pre-ATP-grasp domain AU28_RS15230 IPR003774 Protein of unknown function UPF0301 AU28_RS15235 IPR005227 Resolvase, holliday junction-type, YqgF-like AU28_RS15235 IPR006641 YqgF/RNase H-like domain AU28_RS15235 IPR012337 Ribonuclease H-like domain AU28_RS15240 IPR005471 Transcription regulator IclR, N-terminal AU28_RS15240 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS15240 IPR029016 GAF domain-like AU28_RS15245 IPR001482 Type II secretion system protein E AU28_RS15245 IPR003593 AAA+ ATPase domain AU28_RS15245 IPR006321 Pilus retraction protein PilT AU28_RS15245 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS15250 IPR001608 Alanine racemase, N-terminal AU28_RS15250 IPR011078 Uncharacterised protein family UPF0001 AU28_RS15250 IPR029066 PLP-binding barrel AU28_RS15255 IPR003425 Uncharacterised protein family Ycf19 AU28_RS15260 IPR003746 Protein of unknown function DUF167 AU28_RS15260 IPR005228 Conserved hypothetical protein CHP00251 AU28_RS15265 IPR002637 Ham1-like protein AU28_RS15265 IPR020922 Non-canonical purine NTP pyrophosphatase AU28_RS15265 IPR029001 Inosine triphosphate pyrophosphatase-like AU28_RS15270 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related AU28_RS15270 IPR006638 Elongator protein 3/MiaB/NifB AU28_RS15270 IPR007197 Radical SAM AU28_RS15270 IPR010723 HemN, C-terminal domain AU28_RS15270 IPR023404 Radical SAM, alpha/beta horseshoe AU28_RS15275 IPR009592 Protein of unknown function DUF1202 AU28_RS15280 IPR004550 L-asparaginase, type II AU28_RS15280 IPR006034 Asparaginase/glutaminase AU28_RS15280 IPR020827 Asparaginase/glutaminase, active site 1 AU28_RS15280 IPR027473 L-asparaginase, C-terminal domain AU28_RS15280 IPR027474 L-asparaginase, N-terminal AU28_RS15280 IPR027475 Asparaginase/glutaminase, active site 2 AU28_RS15285 IPR021307 Protein of unknown function DUF2884 AU28_RS15290 IPR007416 Protein of unknown function DUF469 AU28_RS15295 IPR003358 tRNA (guanine-N-7) methyltransferase AU28_RS15295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS15300 IPR000445 Helix-hairpin-helix motif AU28_RS15300 IPR003265 HhH-GPD domain AU28_RS15300 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AU28_RS15300 IPR004035 Endonuclease III, iron-sulphur binding site AU28_RS15300 IPR004036 Endonuclease III-like, conserved site-2 AU28_RS15300 IPR005760 A/G-specific adenine glycosylase MutY AU28_RS15300 IPR011257 DNA glycosylase AU28_RS15300 IPR015797 NUDIX hydrolase domain-like AU28_RS15300 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AU28_RS15300 IPR029119 MutY, C-terminal AU28_RS15305 IPR007457 Fe(II) trafficking protein YggX AU28_RS15310 IPR000189 Prokaryotic transglycosylase, active site AU28_RS15310 IPR008258 Lytic transglycosylase-like SLT domain AU28_RS15310 IPR023346 Lysozyme-like domain AU28_RS15310 IPR023664 Murein transglycosylase-C AU28_RS15310 IPR024570 Murein transglycosylase-C, N-terminal AU28_RS15320 IPR000310 Orn/Lys/Arg decarboxylase, major domain AU28_RS15320 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal AU28_RS15320 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal AU28_RS15320 IPR011006 CheY-like superfamily AU28_RS15320 IPR011193 Ornithine/lysine/arginine decarboxylase AU28_RS15320 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS15320 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS15320 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS15320 IPR027464 Ornithine decarboxylase, N-terminal domain AU28_RS15330 IPR007563 Protein of unknown function DUF554 AU28_RS15340 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AU28_RS15340 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AU28_RS15345 IPR003702 Acetyl-CoA hydrolase/transferase AU28_RS15345 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AU28_RS15350 IPR002539 MaoC-like domain AU28_RS15350 IPR029069 HotDog domain AU28_RS15355 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AU28_RS15355 IPR011206 Citrate lyase beta subunit-like AU28_RS15355 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS15360 IPR000847 Transcription regulator HTH, LysR AU28_RS15360 IPR005119 LysR, substrate-binding AU28_RS15360 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS15365 IPR000917 Sulfatase AU28_RS15365 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS15365 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS15365 IPR024607 Sulfatase, conserved site AU28_RS15370 IPR007197 Radical SAM AU28_RS15370 IPR013785 Aldolase-type TIM barrel AU28_RS15370 IPR023867 Anaerobic sulphatase maturase, radical SAM AU28_RS15370 IPR023885 4Fe4S-binding SPASM domain AU28_RS15375 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS15375 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS15375 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS15380 IPR021500 Protein of unknown function DUF3156 AU28_RS15385 IPR002293 Amino acid/polyamine transporter I AU28_RS15390 IPR008579 Domain of unknown function DUF861, cupin-3 AU28_RS15390 IPR011051 RmlC-like cupin domain AU28_RS15390 IPR014710 RmlC-like jelly roll fold AU28_RS15395 IPR006076 FAD dependent oxidoreductase AU28_RS15395 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS15400 IPR015590 Aldehyde dehydrogenase domain AU28_RS15400 IPR016160 Aldehyde dehydrogenase, cysteine active site AU28_RS15400 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS15400 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS15400 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS15400 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AU28_RS15405 IPR007048 GpW/Gp25/anti-adapter protein IraD AU28_RS15405 IPR023776 Anti-adapter protein, IraD AU28_RS15410 IPR008514 Type VI secretion system effector, Hcp AU28_RS15415 IPR002509 Polysaccharide deacetylase AU28_RS15415 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AU28_RS15420 IPR003010 Carbon-nitrogen hydrolase AU28_RS15425 IPR000849 Sugar phosphate transporter AU28_RS15425 IPR011701 Major facilitator superfamily AU28_RS15425 IPR020846 Major facilitator superfamily domain AU28_RS15430 IPR004628 Mannonate dehydratase AU28_RS15430 IPR013022 Xylose isomerase-like, TIM barrel domain AU28_RS15435 IPR000669 Mannitol dehydrogenase AU28_RS15435 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS15435 IPR013118 Mannitol dehydrogenase, C-terminal AU28_RS15435 IPR013131 Mannitol dehydrogenase, N-terminal AU28_RS15435 IPR013328 Dehydrogenase, multihelical AU28_RS15435 IPR016040 NAD(P)-binding domain AU28_RS15435 IPR023027 Mannitol dehydrogenase, conserved site AU28_RS15440 IPR003766 Uronate isomerase AU28_RS15440 IPR023177 Uronate isomerase, domain 2 AU28_RS15440 IPR032466 AU28_RS15440 AU28_RS15445 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AU28_RS15445 IPR004090 Chemotaxis methyl-accepting receptor AU28_RS15445 IPR025991 Chemoreceptor zinc-binding domain AU28_RS15450 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AU28_RS15450 IPR007921 CHAP domain AU28_RS15450 IPR016185 Pre-ATP-grasp domain AU28_RS15455 IPR004045 Glutathione S-transferase, N-terminal AU28_RS15455 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS15455 IPR012336 Thioredoxin-like fold AU28_RS15465 IPR002491 ABC transporter periplasmic binding domain AU28_RS15470 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AU28_RS15470 IPR019812 Hydrogenase assembly chaperone, conserved site AU28_RS15475 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF AU28_RS15475 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site AU28_RS15480 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE AU28_RS15485 IPR000671 Peptidase A31 family AU28_RS15485 IPR004419 Peptidase A31, hydrogenase expression/formation protein AU28_RS15485 IPR023430 Peptidase HybD-like domain AU28_RS15490 IPR001501 Nickel-dependent hydrogenase, large subunit AU28_RS15490 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site AU28_RS15490 IPR029014 NiFe hydrogenase-like AU28_RS15495 IPR005614 NrfD family AU28_RS15500 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS15500 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS15500 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AU28_RS15505 IPR001821 [NiFe]-hydrogenase, small subunit AU28_RS15505 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AU28_RS15505 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AU28_RS15505 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AU28_RS15510 IPR022574 Protein of unknown function DUF2623 AU28_RS15515 IPR003660 HAMP linker domain AU28_RS15515 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AU28_RS15515 IPR004090 Chemotaxis methyl-accepting receptor AU28_RS15515 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AU28_RS15520 IPR005134 Uncharacterised protein family UPF0114 AU28_RS15520 IPR020761 Uncharacterised protein family UPF0114, bacteria AU28_RS15520 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria AU28_RS15540 IPR002347 Glucose/ribitol dehydrogenase AU28_RS15540 IPR016040 NAD(P)-binding domain AU28_RS15540 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS15545 IPR003400 Biopolymer transport protein ExbD/TolR AU28_RS15545 IPR014170 TonB system transport protein ExbD type-1 AU28_RS15550 IPR002898 MotA/TolQ/ExbB proton channel AU28_RS15550 IPR014164 TonB-system energizer ExbB type-1 AU28_RS15560 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AU28_RS15560 IPR006233 Cystathionine beta-lyase, bacterial AU28_RS15560 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS15560 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS15560 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS15565 IPR032816 AU28_RS15565 AU28_RS15565 IPR032818 AU28_RS15565 AU28_RS15570 IPR009057 Homeodomain-like AU28_RS15570 IPR009594 Transcription regulator HTH, AraC, N-terminal AU28_RS15570 IPR018060 DNA binding HTH domain, AraC-type AU28_RS15575 IPR001670 Alcohol dehydrogenase, iron-type AU28_RS15575 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AU28_RS15580 IPR001395 Aldo/keto reductase AU28_RS15580 IPR018170 Aldo/keto reductase, conserved site AU28_RS15580 IPR020471 Aldo/keto reductase subgroup AU28_RS15580 IPR023210 NADP-dependent oxidoreductase domain AU28_RS15585 IPR001898 Sodium/sulphate symporter AU28_RS15585 IPR030676 AU28_RS15585 AU28_RS15590 IPR001310 Histidine triad (HIT) protein AU28_RS15590 IPR011146 HIT-like domain AU28_RS15600 IPR006638 Elongator protein 3/MiaB/NifB AU28_RS15600 IPR007197 Radical SAM AU28_RS15600 IPR013704 Uncharacterised protein family UPF0313, N-terminal AU28_RS15600 IPR020612 Methylthiotransferase, conserved site AU28_RS15600 IPR022946 Uncharacterised protein family UPF0313 AU28_RS15600 IPR023404 Radical SAM, alpha/beta horseshoe AU28_RS15600 IPR024560 Uncharacterised protein family UPF0313, C-terminal AU28_RS15605 IPR004682 TRAP dicarboxylate transporter AU28_RS15605 IPR018389 Bacterial extracellular solute-binding protein, family 7 AU28_RS15610 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AU28_RS15615 IPR004681 TRAP transporter permease protein AU28_RS15615 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AU28_RS15620 IPR001117 Multicopper oxidase, type 1 AU28_RS15620 IPR008972 Cupredoxin AU28_RS15620 IPR011706 Multicopper oxidase, type 2 AU28_RS15620 IPR011707 Multicopper oxidase, type 3 AU28_RS15620 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AU28_RS15620 IPR026589 Cell division protein FtsP AU28_RS15625 IPR002123 Phospholipid/glycerol acyltransferase AU28_RS15625 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase AU28_RS15630 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AU28_RS15630 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative AU28_RS15630 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel AU28_RS15630 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AU28_RS15630 IPR013760 DNA topoisomerase, type IIA-like domain AU28_RS15630 IPR024946 Arginine repressor C-terminal-like domain AU28_RS15635 IPR009057 Homeodomain-like AU28_RS15635 IPR010499 Bacterial transcription activator, effector binding AU28_RS15635 IPR011256 Regulatory factor, effector binding domain AU28_RS15635 IPR018060 DNA binding HTH domain, AraC-type AU28_RS15635 IPR018062 HTH domain AraC-type, conserved site AU28_RS15635 IPR020449 Transcription regulator HTH, AraC- type AU28_RS15635 IPR029442 GyrI-like small molecule binding domain AU28_RS15640 IPR005220 Viral OB-fold, YgiW AU28_RS15640 IPR016052 Bacteriophage 933W, L0136 AU28_RS15645 IPR001789 Signal transduction response regulator, receiver domain AU28_RS15645 IPR001867 Signal transduction response regulator, C-terminal AU28_RS15645 IPR011006 CheY-like superfamily AU28_RS15645 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS15645 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS15650 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS15650 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS15650 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS15650 IPR013727 Two-component sensor kinase N-terminal AU28_RS15655 IPR003680 Flavodoxin-like fold AU28_RS15655 IPR029039 Flavoprotein-like AU28_RS15660 IPR007138 Antibiotic biosynthesis monooxygenase-like domain AU28_RS15660 IPR011008 Dimeric alpha-beta barrel AU28_RS15665 IPR001241 DNA topoisomerase, type IIA AU28_RS15665 IPR002288 DNA gyrase B subunit, C-terminal AU28_RS15665 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS15665 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative AU28_RS15665 IPR006171 Toprim domain AU28_RS15665 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AU28_RS15665 IPR013759 DNA topoisomerase, type IIA, central domain AU28_RS15665 IPR013760 DNA topoisomerase, type IIA-like domain AU28_RS15665 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS15665 IPR018522 DNA topoisomerase, type IIA, conserved site AU28_RS15665 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS15670 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AU28_RS15670 IPR029058 Alpha/Beta hydrolase fold AU28_RS15675 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AU28_RS15675 IPR013622 Calcineurin-like phosphoesterase C-terminal AU28_RS15675 IPR014739 Channel forming colicin, N-terminal domain AU28_RS15675 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA AU28_RS15675 IPR029052 Metallo-dependent phosphatase-like AU28_RS15680 IPR009659 Protein of unknown function DUF1249 AU28_RS15685 IPR000086 NUDIX hydrolase domain AU28_RS15685 IPR004385 Nucleoside diphosphate pyrophosphatase AU28_RS15685 IPR015797 NUDIX hydrolase domain-like AU28_RS15685 IPR020084 NUDIX hydrolase, conserved site AU28_RS15690 IPR003423 Outer membrane efflux protein AU28_RS15690 IPR010130 Type I secretion outer membrane protein, TolC AU28_RS15695 IPR009576 Biofilm formation YgiB AU28_RS15700 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AU28_RS15700 IPR016185 Pre-ATP-grasp domain AU28_RS15705 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AU28_RS15705 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type AU28_RS15710 IPR003689 Zinc/iron permease AU28_RS15710 IPR023498 Zinc transporter ZupT AU28_RS15715 IPR025125 Protein of unknown function DUF4051 AU28_RS15720 IPR010262 Arylsulfotransferase AU28_RS15720 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria AU28_RS15725 IPR001853 DSBA-like thioredoxin domain AU28_RS15725 IPR012336 Thioredoxin-like fold AU28_RS15725 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AU28_RS15725 IPR028588 Thiol:disulfide interchange protein DsbL AU28_RS15730 IPR003752 Disulphide bond formation protein DsbB/BdbC AU28_RS15730 IPR023380 Disulphide bond formation protein DsbB-like domain AU28_RS15735 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AU28_RS15735 IPR017945 DHBP synthase RibB-like alpha/beta domain AU28_RS15740 IPR007475 Membrane fusogenic activity AU28_RS15745 IPR015065 Glycogen synthesis protein AU28_RS15750 IPR010840 Protein of unknown function DUF1449 AU28_RS15755 IPR001107 Band 7 protein AU28_RS15755 IPR027705 Flotillin family AU28_RS15755 IPR031905 AU28_RS15755 AU28_RS15760 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS15760 IPR004821 Cytidyltransferase-like domain AU28_RS15760 IPR011611 Carbohydrate kinase PfkB AU28_RS15760 IPR011913 RfaE bifunctional protein, domain I AU28_RS15760 IPR011914 RfaE bifunctional protein, domain II AU28_RS15760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS15760 IPR023030 Bifunctional protein HldE AU28_RS15760 IPR029056 Ribokinase-like AU28_RS15765 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain AU28_RS15765 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AU28_RS15765 IPR023057 Glutamate-ammonia-ligase adenylyltransferase AU28_RS15770 IPR023577 CYTH-like domain AU28_RS15770 IPR033469 AU28_RS15770 AU28_RS15775 IPR003646 SH3-like domain, bacterial-type AU28_RS15775 IPR016476 SH3 domain protein AU28_RS15780 IPR002646 Poly A polymerase, head domain AU28_RS15780 IPR003607 HD/PDEase domain AU28_RS15780 IPR006674 HD domain AU28_RS15780 IPR012006 tRNA nucleotidyltransferase, proteobacteria AU28_RS15780 IPR032828 AU28_RS15780 AU28_RS15785 IPR003824 Undecaprenyl-diphosphatase UppP AU28_RS15790 IPR006156 Dihydroneopterin aldolase AU28_RS15790 IPR006157 Dihydroneopterin aldolase/epimerase domain AU28_RS15795 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY AU28_RS15805 IPR000905 Gcp-like domain AU28_RS15805 IPR017860 Peptidase M22, conserved site AU28_RS15805 IPR017861 Kae1/YgjD family AU28_RS15805 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD AU28_RS15810 IPR001911 Ribosomal protein S21 AU28_RS15810 IPR018278 Ribosomal protein S21, conserved site AU28_RS15815 IPR002694 Zinc finger, CHC2-type AU28_RS15815 IPR006171 Toprim domain AU28_RS15815 IPR006295 DNA primase, DnaG AU28_RS15815 IPR013173 DNA primase DnaG, DnaB-binding domain AU28_RS15815 IPR013264 DNA primase, catalytic core, N-terminal AU28_RS15815 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AU28_RS15815 IPR019475 DNA primase, DnaB-helicase binding domain AU28_RS15815 IPR030846 AU28_RS15815 AU28_RS15820 IPR000943 RNA polymerase sigma-70 AU28_RS15820 IPR007127 RNA polymerase sigma factor 70, region 1.1 AU28_RS15820 IPR007624 RNA polymerase sigma-70 region 3 AU28_RS15820 IPR007627 RNA polymerase sigma-70 region 2 AU28_RS15820 IPR007630 RNA polymerase sigma-70 region 4 AU28_RS15820 IPR007631 RNA polymerase sigma factor 70, non-essential domain AU28_RS15820 IPR009042 RNA polymerase sigma-70 region 1.2 AU28_RS15820 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS15820 IPR012760 RNA polymerase sigma factor RpoD, C-terminal AU28_RS15820 IPR013324 RNA polymerase sigma factor, region 3/4 AU28_RS15820 IPR013325 RNA polymerase sigma factor, region 2 AU28_RS15820 IPR014284 RNA polymerase sigma-70 like domain AU28_RS15820 IPR028630 RNA polymerase sigma factor RpoD AU28_RS15825 IPR005122 Uracil-DNA glycosylase-like AU28_RS15825 IPR015637 DNA glycosylase, G/T mismatch AU28_RS15825 IPR023502 DNA glycosylase, G/T mismatch, bacterial AU28_RS15835 IPR007037 Siderophore-interacting protein AU28_RS15835 IPR013113 FAD-binding 9, siderophore-interacting AU28_RS15835 IPR017938 Riboflavin synthase-like beta-barrel AU28_RS15840 IPR005149 Transcription regulator PadR N-terminal AU28_RS15840 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS15845 IPR003660 HAMP linker domain AU28_RS15845 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AU28_RS15845 IPR004090 Chemotaxis methyl-accepting receptor AU28_RS15845 IPR024478 4HB MCP domain AU28_RS15850 IPR000014 PAS domain AU28_RS15850 IPR001610 PAC motif AU28_RS15850 IPR003660 HAMP linker domain AU28_RS15850 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AU28_RS15850 IPR004090 Chemotaxis methyl-accepting receptor AU28_RS15850 IPR013655 PAS fold-3 AU28_RS15855 IPR005814 Aminotransferase class-III AU28_RS15855 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS15855 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS15855 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS15855 IPR017747 Putrescine aminotransferase AU28_RS15860 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AU28_RS15860 IPR013785 Aldolase-type TIM barrel AU28_RS15860 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS15865 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS15865 IPR007848 Methyltransferase small domain AU28_RS15865 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD AU28_RS15865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS15870 IPR002725 Protein of unknown function DUF45 AU28_RS15875 IPR003848 Domain of unknown function DUF218 AU28_RS15875 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS15880 IPR000683 Oxidoreductase, N-terminal AU28_RS15880 IPR016040 NAD(P)-binding domain AU28_RS15885 IPR005496 Integral membrane protein TerC AU28_RS15885 IPR022369 Integral membrane protein TerC, riboswitch-linked AU28_RS15890 IPR001991 Sodium:dicarboxylate symporter AU28_RS15890 IPR023025 Serine/threonine transporter SstT AU28_RS15895 IPR032816 AU28_RS15895 AU28_RS15895 IPR032818 AU28_RS15895 AU28_RS15900 IPR026574 Modulator protein MzrA AU28_RS15900 IPR027398 SecD export protein N-terminal TM domain AU28_RS15905 IPR009468 Protein of unknown function DUF1090 AU28_RS15910 IPR010279 Protein of unknown function DUF883, ElaB AU28_RS15915 IPR009937 Protein of unknown function DUF1469 AU28_RS15920 IPR025612 YqjK-like protein AU28_RS15925 IPR032808 AU28_RS15925 AU28_RS15930 IPR004045 Glutathione S-transferase, N-terminal AU28_RS15930 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS15930 IPR012336 Thioredoxin-like fold AU28_RS15930 IPR016639 Glutathione S-transferase (GST) AU28_RS15935 IPR008523 Lactobacillus phage LBR48, DUF805 AU28_RS15940 IPR000847 Transcription regulator HTH, LysR AU28_RS15940 IPR005119 LysR, substrate-binding AU28_RS15940 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS15945 IPR003829 Pirin, N-terminal domain AU28_RS15945 IPR011051 RmlC-like cupin domain AU28_RS15945 IPR012093 Pirin AU28_RS15945 IPR014710 RmlC-like jelly roll fold AU28_RS15955 IPR005130 Serine dehydratase-like, alpha subunit AU28_RS15955 IPR021144 Uncharacterised protein family UPF0597 AU28_RS15965 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AU28_RS15965 IPR005130 Serine dehydratase-like, alpha subunit AU28_RS15965 IPR005131 Serine dehydratase beta chain AU28_RS15965 IPR029009 Allosteric substrate binding domain AU28_RS15970 IPR001150 Glycine radical domain AU28_RS15970 IPR004184 Pyruvate formate lyase domain AU28_RS15970 IPR005949 Formate acetyltransferase AU28_RS15970 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AU28_RS15975 IPR000890 Aliphatic acid kinase, short-chain AU28_RS15975 IPR004372 Acetate/Proprionate kinase AU28_RS15975 IPR023865 Aliphatic acid kinase, short-chain, conserved site AU28_RS15975 IPR024917 Propionate kinase AU28_RS15980 IPR004694 Hydroxy amino acid transporter AU28_RS15980 IPR018227 Tryptophan/tyrosine permease AU28_RS15980 IPR023726 Threonine/serine transporter TdcC AU28_RS15985 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AU28_RS15985 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS15985 IPR005789 Threonine dehydratase, catabolic AU28_RS15990 IPR000847 Transcription regulator HTH, LysR AU28_RS15990 IPR005119 LysR, substrate-binding AU28_RS15990 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS15995 IPR004381 Glycerate kinase AU28_RS15995 IPR018193 Glycerate kinase, flavodoxin-like domain AU28_RS16000 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AU28_RS16000 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AU28_RS16000 IPR006398 2-hydroxy-3-oxopropionate reductase AU28_RS16000 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS16000 IPR013328 Dehydrogenase, multihelical AU28_RS16000 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type AU28_RS16000 IPR016040 NAD(P)-binding domain AU28_RS16000 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AU28_RS16005 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AU28_RS16005 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS16005 IPR017648 2-dehydro-3-deoxyglucarate aldolase, GarL AU28_RS16010 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal AU28_RS16010 IPR013974 SAF domain AU28_RS16010 IPR017654 Galactarate dehydratase AU28_RS16010 IPR032893 AU28_RS16010 AU28_RS16015 IPR000771 Ketose-bisphosphate aldolase, class-II AU28_RS16015 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY AU28_RS16015 IPR013785 Aldolase-type TIM barrel AU28_RS16015 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY AU28_RS16020 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ AU28_RS16020 IPR013785 Aldolase-type TIM barrel AU28_RS16020 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ AU28_RS16025 IPR002178 PTS EIIA type-2 domain AU28_RS16025 IPR016152 Phosphotransferase/anion transporter AU28_RS16030 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS16035 IPR004703 Phosphotransferase system, sugar-specific permease component AU28_RS16035 IPR013853 Galactitol permease IIC component AU28_RS16040 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS16040 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AU28_RS16040 IPR011032 GroES (chaperonin 10)-like AU28_RS16040 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS16040 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS16040 IPR016040 NAD(P)-binding domain AU28_RS16040 IPR020843 Polyketide synthase, enoylreductase AU28_RS16045 IPR001034 HTH DeoR N-terminal domain AU28_RS16045 IPR001969 Aspartic peptidase, active site AU28_RS16045 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS16045 IPR014036 DeoR C-terminal sensor domain AU28_RS16045 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS16050 IPR000878 Tetrapyrrole methylase AU28_RS16050 IPR008189 rRNA small subunit methyltransferase I AU28_RS16050 IPR014776 Tetrapyrrole methylase, subdomain 2 AU28_RS16050 IPR014777 Tetrapyrrole methylase, subdomain 1 AU28_RS16050 IPR018063 SAM-dependent methyltransferase RsmI, conserved site AU28_RS16055 IPR007443 Penicillin-binding protein activator LpoA AU28_RS16055 IPR028082 Periplasmic binding protein-like I AU28_RS16060 IPR003509 Uncharacterised protein family UPF0102 AU28_RS16060 IPR011335 Restriction endonuclease type II-like AU28_RS16060 IPR011856 tRNA endonuclease-like domain AU28_RS16065 IPR001347 Sugar isomerase (SIS) AU28_RS16065 IPR023070 DnaA initiator-associating protein AU28_RS16070 IPR007055 BON domain AU28_RS16070 IPR014004 Transport-associated and nodulation domain, bacteria AU28_RS16075 IPR000534 Semialdehyde dehydrogenase, NAD-binding AU28_RS16075 IPR016040 NAD(P)-binding domain AU28_RS16080 IPR002818 ThiJ/PfpI AU28_RS16080 IPR006286 Peptidase C56, PfpI AU28_RS16080 IPR029062 Class I glutamine amidotransferase-like AU28_RS16085 IPR011194 Uncharacterised protein family UPF0306 AU28_RS16085 IPR012349 FMN-binding split barrel AU28_RS16090 IPR000305 GIY-YIG nuclease superfamily AU28_RS16090 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease AU28_RS16095 IPR000182 GNAT domain AU28_RS16095 IPR016181 Acyl-CoA N-acyltransferase AU28_RS16100 IPR003033 SCP2 sterol-binding domain AU28_RS16100 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AU28_RS16105 IPR001539 Peptidase U32 AU28_RS16105 IPR022998 Thiamin phosphate synthase superfamily AU28_RS16110 IPR001539 Peptidase U32 AU28_RS16115 IPR011251 Luciferase-like domain AU28_RS16115 IPR019949 Luciferase family oxidoreductase, group 1 AU28_RS16130 IPR002091 Aromatic amino acid permease AU28_RS16130 IPR013059 Tryptophan/tyrosine transporter AU28_RS16130 IPR013061 Tryptophan/tryrosine permease, conserved site AU28_RS16130 IPR018227 Tryptophan/tyrosine permease AU28_RS16135 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AU28_RS16135 IPR001650 Helicase, C-terminal AU28_RS16135 IPR005580 DbpA, RNA-binding AU28_RS16135 IPR011545 DEAD/DEAH box helicase domain AU28_RS16135 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS16135 IPR021046 Cold-shock protein, DEAD box A, C-terminal AU28_RS16135 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS16135 IPR028618 ATP-dependent RNA helicase DeaD AU28_RS16140 IPR011990 Tetratricopeptide-like helical domain AU28_RS16140 IPR013105 Tetratricopeptide TPR2 AU28_RS16140 IPR019734 Tetratricopeptide repeat AU28_RS16140 IPR023605 Lipoprotein NlpI AU28_RS16145 IPR001247 Exoribonuclease, phosphorolytic domain 1 AU28_RS16145 IPR003029 Ribosomal protein S1, RNA-binding domain AU28_RS16145 IPR004087 K Homology domain AU28_RS16145 IPR004088 K Homology domain, type 1 AU28_RS16145 IPR012162 Polyribonucleotide nucleotidyltransferase AU28_RS16145 IPR012340 Nucleic acid-binding, OB-fold AU28_RS16145 IPR015847 Exoribonuclease, phosphorolytic domain 2 AU28_RS16145 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AU28_RS16145 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS16145 IPR022967 RNA-binding domain, S1 AU28_RS16145 IPR027408 PNPase/RNase PH domain AU28_RS16150 IPR000589 Ribosomal protein S15 AU28_RS16150 IPR005290 Ribosomal protein S15, bacterial-type AU28_RS16150 IPR009068 S15/NS1, RNA-binding AU28_RS16155 IPR002501 Pseudouridine synthase II AU28_RS16155 IPR014780 tRNA pseudouridine synthase II, TruB AU28_RS16155 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal AU28_RS16155 IPR015947 PUA-like domain AU28_RS16155 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS16155 IPR032819 AU28_RS16155 AU28_RS16160 IPR000238 Ribosome-binding factor A AU28_RS16160 IPR015946 K homology domain-like, alpha/beta AU28_RS16160 IPR020053 Ribosome-binding factor A, conserved site AU28_RS16160 IPR023799 Ribosome-binding factor A domain AU28_RS16165 IPR000178 Translation initiation factor aIF-2, bacterial-like AU28_RS16165 IPR005225 Small GTP-binding protein domain AU28_RS16165 IPR006847 Translation initiation factor IF-2, N-terminal AU28_RS16165 IPR009000 Translation protein, beta-barrel domain AU28_RS16165 IPR009061 DNA binding domain, putative AU28_RS16165 IPR013575 Initiation factor 2 associated domain, bacterial AU28_RS16165 IPR023115 Translation initiation factor IF- 2, domain 3 AU28_RS16165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS16170 IPR004087 K Homology domain AU28_RS16170 IPR009019 K homology domain, prokaryotic type AU28_RS16170 IPR010213 Transcription termination factor NusA AU28_RS16170 IPR010214 Transcription termination factor NusA, C-terminal duplication AU28_RS16170 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical AU28_RS16170 IPR012340 Nucleic acid-binding, OB-fold AU28_RS16170 IPR013735 Transcription factor NusA, N-terminal AU28_RS16170 IPR015946 K homology domain-like, alpha/beta AU28_RS16170 IPR022967 RNA-binding domain, S1 AU28_RS16170 IPR025249 KH domain, NusA-like AU28_RS16170 IPR030842 AU28_RS16170 AU28_RS16175 IPR003728 Ribosome maturation factor RimP AU28_RS16175 IPR028989 Ribosome maturation factor RimP, N-terminal AU28_RS16175 IPR028998 Ribosome maturation factor RimP, C-terminal AU28_RS16185 IPR001518 Argininosuccinate synthase AU28_RS16185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS16185 IPR018223 Argininosuccinate synthase, conserved site AU28_RS16185 IPR023437 Argininosuccinate synthase, type 2 subfamily AU28_RS16185 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail AU28_RS16185 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body AU28_RS16190 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS16200 IPR004692 Preprotein translocase SecG subunit AU28_RS16205 IPR005841 Alpha-D-phosphohexomutase superfamily AU28_RS16205 IPR005843 Alpha-D-phosphohexomutase, C-terminal AU28_RS16205 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AU28_RS16205 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AU28_RS16205 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AU28_RS16205 IPR006352 Phosphoglucosamine mutase AU28_RS16205 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AU28_RS16205 IPR016066 Alpha-D-phosphohexomutase, conserved site AU28_RS16210 IPR000489 Pterin-binding AU28_RS16210 IPR006390 Dihydropteroate synthase AU28_RS16210 IPR011005 Dihydropteroate synthase-like AU28_RS16215 IPR000642 Peptidase M41 AU28_RS16215 IPR003593 AAA+ ATPase domain AU28_RS16215 IPR003959 ATPase, AAA-type, core AU28_RS16215 IPR003960 ATPase, AAA-type, conserved site AU28_RS16215 IPR005936 Peptidase, FtsH AU28_RS16215 IPR011546 Peptidase M41, FtsH extracellular AU28_RS16215 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS16220 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AU28_RS16220 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria AU28_RS16220 IPR015507 Ribosomal RNA large subunit methyltransferase E AU28_RS16220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS16225 IPR001890 RNA-binding, CRM domain AU28_RS16225 IPR017924 RNA-binding protein YhbY AU28_RS16230 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AU28_RS16230 IPR006359 Transcription elongation factor GreA AU28_RS16230 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AU28_RS16230 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AU28_RS16230 IPR023459 Transcription elongation factor GreA/GreB family AU28_RS16230 IPR028624 Transcription elongation factor GreA/GreB AU28_RS16240 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C AU28_RS16240 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS16245 IPR006073 GTP binding domain AU28_RS16245 IPR006074 GTP1/OBG, conserved site AU28_RS16245 IPR006169 GTP1/OBG domain AU28_RS16245 IPR014100 GTP-binding protein Obg/CgtA AU28_RS16245 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS16250 IPR000620 Drug/metabolite transporter AU28_RS16255 IPR001684 Ribosomal protein L27 AU28_RS16255 IPR018261 Ribosomal protein L27, conserved site AU28_RS16260 IPR001787 Ribosomal protein L21 AU28_RS16260 IPR018258 Ribosomal protein L21, conserved site AU28_RS16260 IPR028909 Ribosomal protein L21-like AU28_RS16265 IPR000092 Polyprenyl synthetase AU28_RS16265 IPR008949 Terpenoid synthase AU28_RS16265 IPR017446 Polyprenyl synthetase-related AU28_RS16270 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS16275 IPR001986 Enolpyruvate transferase domain AU28_RS16275 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase AU28_RS16275 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AU28_RS16280 IPR002634 BolA protein AU28_RS16285 IPR002645 STAS domain AU28_RS16290 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AU28_RS16290 IPR023094 Toluene tolerance protein, alpha-helical AU28_RS16290 IPR032710 AU28_RS16290 AU28_RS16295 IPR003399 Mammalian cell entry-related AU28_RS16295 IPR030970 AU28_RS16295 AU28_RS16300 IPR003453 Permease domain AU28_RS16300 IPR030802 AU28_RS16300 AU28_RS16305 IPR003439 ABC transporter-like AU28_RS16305 IPR003593 AAA+ ATPase domain AU28_RS16305 IPR017871 ABC transporter, conserved site AU28_RS16305 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS16310 IPR004481 Sodium/potassium/calcium exchanger AU28_RS16310 IPR004837 Sodium/calcium exchanger membrane region AU28_RS16315 IPR000644 CBS domain AU28_RS16315 IPR001347 Sugar isomerase (SIS) AU28_RS16315 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type AU28_RS16320 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase AU28_RS16320 IPR023214 HAD-like domain AU28_RS16325 IPR010664 Lipopolysaccharide assembly, LptC-related AU28_RS16325 IPR026265 Lipopolysaccharide export system protein LptC AU28_RS16330 IPR005653 Organic solvent tolerance-like, N-terminal AU28_RS16330 IPR014340 Lipopolysaccharide assembly, LptA AU28_RS16335 IPR003439 ABC transporter-like AU28_RS16335 IPR003593 AAA+ ATPase domain AU28_RS16335 IPR017871 ABC transporter, conserved site AU28_RS16335 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS16335 IPR030921 AU28_RS16335 AU28_RS16335 IPR032823 AU28_RS16335 AU28_RS16340 IPR000394 RNA polymerase sigma factor 54 AU28_RS16340 IPR007046 RNA polymerase sigma factor 54, core-binding AU28_RS16340 IPR007634 RNA polymerase sigma factor 54, DNA-binding AU28_RS16345 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein AU28_RS16350 IPR002178 PTS EIIA type-2 domain AU28_RS16350 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN AU28_RS16350 IPR016152 Phosphotransferase/anion transporter AU28_RS16355 IPR005337 ATPase, P-loop-containing AU28_RS16355 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS16360 IPR000032 Phosphocarrier HPr protein-like AU28_RS16360 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AU28_RS16360 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AU28_RS16365 IPR011009 Protein kinase-like domain AU28_RS16365 IPR019647 PhoP regulatory network protein YrbL AU28_RS16370 IPR001264 Glycosyl transferase, family 51 AU28_RS16370 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase AU28_RS16370 IPR023346 Lysozyme-like domain AU28_RS16375 IPR002818 ThiJ/PfpI AU28_RS16375 IPR026041 Enhancing lycopene biosynthesis protein 2 AU28_RS16375 IPR029062 Class I glutamine amidotransferase-like AU28_RS16380 IPR000014 PAS domain AU28_RS16380 IPR001789 Signal transduction response regulator, receiver domain AU28_RS16380 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS16380 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS16380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS16380 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AU28_RS16380 IPR011006 CheY-like superfamily AU28_RS16380 IPR013767 PAS fold AU28_RS16380 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB AU28_RS16380 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain AU28_RS16385 IPR005911 Conserved hypothetical protein CHP01212 AU28_RS16385 IPR006638 Elongator protein 3/MiaB/NifB AU28_RS16385 IPR007197 Radical SAM AU28_RS16385 IPR023404 Radical SAM, alpha/beta horseshoe AU28_RS16385 IPR032432 AU28_RS16385 AU28_RS16395 IPR002489 Glutamate synthase, alpha subunit, C-terminal AU28_RS16395 IPR002932 Glutamate synthase domain AU28_RS16395 IPR006982 Glutamate synthase, central-N AU28_RS16395 IPR013785 Aldolase-type TIM barrel AU28_RS16395 IPR017932 Glutamine amidotransferase type 2 domain AU28_RS16395 IPR029055 Nucleophile aminohydrolases, N-terminal AU28_RS16400 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 AU28_RS16400 IPR009051 Alpha-helical ferredoxin AU28_RS16400 IPR016040 NAD(P)-binding domain AU28_RS16400 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS16400 IPR028261 Dihydroprymidine dehydrogenase domain II AU28_RS16405 IPR009362 Protein of unknown function DUF1016 AU28_RS16410 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin AU28_RS16410 IPR030191 AU28_RS16410 AU28_RS16415 IPR011059 Metal-dependent hydrolase, composite domain AU28_RS16415 IPR013108 Amidohydrolase 3 AU28_RS16415 IPR032466 AU28_RS16415 AU28_RS16420 IPR004375 Conserved hypothetical protein CHP00022 AU28_RS16425 IPR000600 ROK AU28_RS16425 IPR023945 N-acetylmannosamine kinase, bacterial AU28_RS16430 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase AU28_RS16430 IPR011060 Ribulose-phosphate binding barrel AU28_RS16430 IPR013785 Aldolase-type TIM barrel AU28_RS16435 IPR004742 Sialic acid transporter AU28_RS16435 IPR011701 Major facilitator superfamily AU28_RS16435 IPR020846 Major facilitator superfamily domain AU28_RS16440 IPR002220 DapA-like AU28_RS16440 IPR005264 N-acetylneuraminate lyase AU28_RS16440 IPR013785 Aldolase-type TIM barrel AU28_RS16440 IPR020624 Dihydrodipicolinate synthetase, conserved site AU28_RS16440 IPR020625 Dihydrodipicolinate synthetase, active site AU28_RS16445 IPR000524 Transcription regulator HTH, GntR AU28_RS16445 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS16445 IPR011711 GntR, C-terminal AU28_RS16445 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS16445 IPR023730 Transcriptional regulator NanR AU28_RS16450 IPR007481 Stringent starvation protein B AU28_RS16455 IPR004045 Glutathione S-transferase, N-terminal AU28_RS16455 IPR004046 Glutathione S-transferase, C-terminal AU28_RS16455 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS16455 IPR012336 Thioredoxin-like fold AU28_RS16460 IPR006506 Conserved hypothetical protein CHP01619 AU28_RS16460 IPR009671 Regulator of ribonuclease activity B domain AU28_RS16460 IPR016097 Domain of unknown function DUF695 AU28_RS16465 IPR000754 Ribosomal protein S9 AU28_RS16465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS16465 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS16465 IPR020574 Ribosomal protein S9, conserved site AU28_RS16465 IPR023035 Ribosomal protein S9, bacterial/plastid AU28_RS16470 IPR005822 Ribosomal protein L13 AU28_RS16470 IPR005823 Ribosomal protein L13, bacterial-type AU28_RS16470 IPR023563 Ribosomal protein L13, conserved site AU28_RS16470 IPR023564 Ribosomal protein L13 domain AU28_RS16475 IPR005654 ATPase, AFG1-like AU28_RS16475 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS16475 IPR030870 AU28_RS16475 AU28_RS16480 IPR009386 Protein of unknown function DUF1043 AU28_RS16485 IPR001478 PDZ domain AU28_RS16485 IPR001940 Peptidase S1C AU28_RS16485 IPR009003 Trypsin-like cysteine/serine peptidase domain AU28_RS16485 IPR011782 Peptidase S1C, Do AU28_RS16490 IPR001478 PDZ domain AU28_RS16490 IPR001940 Peptidase S1C AU28_RS16490 IPR009003 Trypsin-like cysteine/serine peptidase domain AU28_RS16490 IPR011783 Peptidase S1C, DegS AU28_RS16495 IPR002736 Triphosphoribosyl-dephospho-CoA protein AU28_RS16500 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit AU28_RS16505 IPR000089 Biotin/lipoyl attachment AU28_RS16505 IPR000891 Pyruvate carboxyltransferase AU28_RS16505 IPR001882 Biotin-binding site AU28_RS16505 IPR003379 Carboxylase, conserved domain AU28_RS16505 IPR005776 Oxaloacetate decarboxylase, alpha subunit AU28_RS16505 IPR011053 Single hybrid motif AU28_RS16505 IPR013785 Aldolase-type TIM barrel AU28_RS16510 IPR005899 Sodium ion-translocating decarboxylase AU28_RS16510 IPR023424 Oxaloacetate decarboxylase gamma chain, probable AU28_RS16515 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AU28_RS16520 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AU28_RS16525 IPR001898 Sodium/sulphate symporter AU28_RS16525 IPR004680 Citrate transporter-like domain AU28_RS16530 IPR000524 Transcription regulator HTH, GntR AU28_RS16530 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS16530 IPR011711 GntR, C-terminal AU28_RS16530 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS16535 IPR000524 Transcription regulator HTH, GntR AU28_RS16535 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS16535 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS16540 IPR001236 Lactate/malate dehydrogenase, N-terminal AU28_RS16540 IPR001252 Malate dehydrogenase, active site AU28_RS16540 IPR001557 L-lactate/malate dehydrogenase AU28_RS16540 IPR010097 Malate dehydrogenase, type 1 AU28_RS16540 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AU28_RS16540 IPR016040 NAD(P)-binding domain AU28_RS16540 IPR022383 Lactate/malate dehydrogenase, C-terminal AU28_RS16540 IPR023958 Malate dehydrogenase, type 1, bacterial AU28_RS16545 IPR001669 Arginine repressor AU28_RS16545 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS16545 IPR020899 Arginine repressor, C-terminal AU28_RS16545 IPR020900 Arginine repressor, DNA-binding domain AU28_RS16545 IPR024946 Arginine repressor C-terminal-like domain AU28_RS16550 IPR010854 Domain of unknown function DUF1471 AU28_RS16550 IPR025543 Dodecin-like AU28_RS16555 IPR010854 Domain of unknown function DUF1471 AU28_RS16555 IPR025543 Dodecin-like AU28_RS16560 IPR000468 Barstar (barnase inhibitor) AU28_RS16565 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein AU28_RS16565 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB AU28_RS16570 IPR006143 RND efflux pump, membrane fusion protein AU28_RS16570 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA AU28_RS16575 IPR012451 Protein of unknown function DUF1656 AU28_RS16580 IPR000847 Transcription regulator HTH, LysR AU28_RS16580 IPR005119 LysR, substrate-binding AU28_RS16580 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS16585 IPR002510 TldD/PmbA AU28_RS16585 IPR025502 TldD AU28_RS16590 IPR011836 Conserved hypothetical protein CHP02099 AU28_RS16590 IPR025263 Domain of unknown function DUF3971 AU28_RS16590 IPR032712 AU28_RS16590 AU28_RS16595 IPR003029 Ribosomal protein S1, RNA-binding domain AU28_RS16595 IPR004659 Ribonuclease E/G AU28_RS16595 IPR012340 Nucleic acid-binding, OB-fold AU28_RS16595 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AU28_RS16595 IPR022967 RNA-binding domain, S1 AU28_RS16600 IPR003697 Maf-like protein AU28_RS16600 IPR029001 Inosine triphosphate pyrophosphatase-like AU28_RS16605 IPR007227 Cell shape-determining protein MreD AU28_RS16605 IPR026034 Cell shape-determining protein MreD, proteobacterial type AU28_RS16610 IPR007221 Rod shape-determining protein MreC AU28_RS16615 IPR004753 Cell shape determining protein MreB/Mrl AU28_RS16625 IPR000160 GGDEF domain AU28_RS16625 IPR001633 EAL domain AU28_RS16625 IPR029787 Nucleotide cyclase AU28_RS16625 IPR033423 AU28_RS16625 AU28_RS16630 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS16630 IPR011032 GroES (chaperonin 10)-like AU28_RS16630 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS16630 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS16630 IPR014188 Acrylyl-CoA reductase AcuI AU28_RS16630 IPR016040 NAD(P)-binding domain AU28_RS16630 IPR020843 Polyketide synthase, enoylreductase AU28_RS16635 IPR000572 Oxidoreductase, molybdopterin-binding domain AU28_RS16635 IPR022867 Sulphoxide reductase catalytic subunit YedY AU28_RS16640 IPR013130 Ferric reductase transmembrane component-like domain AU28_RS16640 IPR022837 Sulphoxide reductase heme-binding subunit YedZ AU28_RS16645 IPR000089 Biotin/lipoyl attachment AU28_RS16645 IPR001249 Acetyl-CoA biotin carboxyl carrier AU28_RS16645 IPR001882 Biotin-binding site AU28_RS16645 IPR011053 Single hybrid motif AU28_RS16650 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase AU28_RS16650 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AU28_RS16650 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal AU28_RS16650 IPR005482 Biotin carboxylase, C-terminal AU28_RS16650 IPR011054 Rudiment single hybrid motif AU28_RS16650 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS16650 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS16650 IPR016185 Pre-ATP-grasp domain AU28_RS16655 IPR010398 Protein of unknown function DUF997 AU28_RS16660 IPR001734 Sodium/solute symporter AU28_RS16660 IPR011849 Sodium/pantothenate symporter AU28_RS16660 IPR018212 Sodium/solute symporter, conserved site AU28_RS16665 IPR004498 Ribosomal protein L11 methyltransferase AU28_RS16665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS16670 IPR001269 tRNA-dihydrouridine synthase AU28_RS16670 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 AU28_RS16670 IPR013785 Aldolase-type TIM barrel AU28_RS16670 IPR018517 tRNA-dihydrouridine synthase, conserved site AU28_RS16670 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal AU28_RS16670 IPR032887 AU28_RS16670 AU28_RS16675 IPR002197 DNA binding HTH domain, Fis-type AU28_RS16675 IPR005412 DNA-binding protein Fis AU28_RS16675 IPR009057 Homeodomain-like AU28_RS16680 IPR001091 Restriction/modification DNA-methylase AU28_RS16680 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS16680 IPR002941 DNA methylase N-4/N-6 AU28_RS16680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS16685 IPR022540 Protein of unknown function DUF2556 AU28_RS16690 IPR000160 GGDEF domain AU28_RS16690 IPR001633 EAL domain AU28_RS16690 IPR005330 MHYT AU28_RS16690 IPR029787 Nucleotide cyclase AU28_RS16695 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS16695 IPR009057 Homeodomain-like AU28_RS16695 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS16695 IPR013572 Transcription regulator MAATS, C-terminal AU28_RS16695 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS16695 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AU28_RS16700 IPR006143 RND efflux pump, membrane fusion protein AU28_RS16700 IPR032317 AU28_RS16700 AU28_RS16705 IPR001036 Acriflavin resistance protein AU28_RS16705 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AU28_RS16705 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AU28_RS16745 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS16745 IPR011004 Trimeric LpxA-like AU28_RS16750 IPR009962 Protein of unknown function DUF1488 AU28_RS16755 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AU28_RS16755 IPR011342 Shikimate dehydrogenase AU28_RS16755 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AU28_RS16755 IPR016040 NAD(P)-binding domain AU28_RS16755 IPR022893 Shikimate, quinate/shikimate dehydrogenase AU28_RS16760 IPR006070 YrdC-like domain AU28_RS16760 IPR017945 DHBP synthase RibB-like alpha/beta domain AU28_RS16760 IPR023535 Threonylcarbamoyl-AMP synthase AU28_RS16765 IPR000380 DNA topoisomerase, type IA AU28_RS16765 IPR013498 DNA topoisomerase, type IA, zn finger AU28_RS16770 IPR007456 Protein of unknown function DUF494 AU28_RS16775 IPR003488 DNA recombination-mediator protein A AU28_RS16780 IPR000181 Formylmethionine deformylase AU28_RS16780 IPR023635 Peptide deformylase AU28_RS16785 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AU28_RS16785 IPR002376 Formyl transferase, N-terminal AU28_RS16785 IPR005793 Formyl transferase, C-terminal AU28_RS16785 IPR005794 Methionyl-tRNA formyltransferase AU28_RS16785 IPR011034 Formyl transferase, C-terminal-like AU28_RS16790 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p AU28_RS16790 IPR004573 rRNA small subunit methyltransferase B AU28_RS16790 IPR006027 NusB/RsmB/TIM44 AU28_RS16790 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AU28_RS16790 IPR023267 RNA (C5-cytosine) methyltransferase AU28_RS16790 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae AU28_RS16790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS16795 IPR003148 Regulator of K+ conductance, N-terminal AU28_RS16795 IPR006036 Potassium uptake protein TrkA AU28_RS16795 IPR006037 Regulator of K+ conductance, C-terminal AU28_RS16795 IPR016040 NAD(P)-binding domain AU28_RS16800 IPR001185 Large-conductance mechanosensitive channel AU28_RS16800 IPR019823 Large-conductance mechanosensitive channel, conserved site AU28_RS16805 IPR005589 Protein of unknown function DUF331 AU28_RS16810 IPR000551 MerR-type HTH domain AU28_RS16810 IPR009061 DNA binding domain, putative AU28_RS16810 IPR011788 Zn(II)-responsive transcriptional regulator AU28_RS16815 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain AU28_RS16820 IPR000456 Ribosomal protein L17 AU28_RS16825 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain AU28_RS16825 IPR011260 RNA polymerase, alpha subunit, C-terminal AU28_RS16825 IPR011262 DNA-directed RNA polymerase, insert domain AU28_RS16825 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type AU28_RS16825 IPR011773 DNA-directed RNA polymerase, alpha subunit AU28_RS16830 IPR001912 Ribosomal protein S4/S9, N-terminal AU28_RS16830 IPR002942 RNA-binding S4 domain AU28_RS16830 IPR005709 Ribosomal protein S4, bacterial-type AU28_RS16830 IPR018079 Ribosomal protein S4, conserved site AU28_RS16830 IPR022801 Ribosomal protein S4/S9 AU28_RS16835 IPR001971 Ribosomal protein S11 AU28_RS16835 IPR018102 Ribosomal S11, conserved site AU28_RS16835 IPR019981 Ribosomal protein S11, bacterial-type AU28_RS16840 IPR001892 Ribosomal protein S13 AU28_RS16840 IPR010979 Ribosomal protein S13-like, H2TH AU28_RS16840 IPR018269 Ribosomal protein S13, conserved site AU28_RS16840 IPR019980 Ribosomal protein S13, bacterial-type AU28_RS16840 IPR027437 30s ribosomal protein S13, C-terminal AU28_RS16845 IPR000473 Ribosomal protein L36 AU28_RS16850 IPR002208 SecY/SEC61-alpha family AU28_RS16850 IPR023201 SecY subunit domain AU28_RS16850 IPR026593 Protein translocase subunit SecY AU28_RS16850 IPR030659 AU28_RS16850 AU28_RS16855 IPR001196 Ribosomal protein L15, conserved site AU28_RS16855 IPR005749 Ribosomal protein L15, bacterial-type AU28_RS16855 IPR021131 Ribosomal protein L18e/L15P AU28_RS16855 IPR030878 AU28_RS16855 AU28_RS16860 IPR005996 Ribosomal protein L30, bacterial-type AU28_RS16860 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AU28_RS16860 IPR018038 Ribosomal protein L30, conserved site AU28_RS16865 IPR000851 Ribosomal protein S5 AU28_RS16865 IPR005324 Ribosomal protein S5, C-terminal AU28_RS16865 IPR005712 Ribosomal protein S5, bacterial-type AU28_RS16865 IPR013810 Ribosomal protein S5, N-terminal AU28_RS16865 IPR014720 Double-stranded RNA-binding domain AU28_RS16865 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS16865 IPR018192 Ribosomal protein S5, N-terminal, conserved site AU28_RS16865 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS16870 IPR004389 Ribosomal protein L18, bacterial-type AU28_RS16870 IPR005484 Ribosomal protein L18/L5 AU28_RS16875 IPR000702 Ribosomal protein L6 AU28_RS16875 IPR002358 Ribosomal protein L6, conserved site AU28_RS16875 IPR019906 Ribosomal protein L6, bacterial-type AU28_RS16875 IPR020040 Ribosomal protein L6, alpha-beta domain AU28_RS16880 IPR000630 Ribosomal protein S8 AU28_RS16885 IPR001209 Ribosomal protein S14 AU28_RS16885 IPR018271 Ribosomal protein S14, conserved site AU28_RS16885 IPR023036 Ribosomal protein S14, bacterial/plastid AU28_RS16890 IPR002132 Ribosomal protein L5 AU28_RS16890 IPR020929 Ribosomal protein L5, conserved site AU28_RS16890 IPR020930 Ribosomal protein L5, bacterial-type AU28_RS16890 IPR022803 Ribosomal protein L5 domain AU28_RS16890 IPR031309 AU28_RS16890 AU28_RS16890 IPR031310 AU28_RS16890 AU28_RS16895 IPR003256 Ribosomal protein L24 AU28_RS16895 IPR005824 KOW AU28_RS16895 IPR005825 Ribosomal protein L24/L26, conserved site AU28_RS16895 IPR008991 Translation protein SH3-like domain AU28_RS16895 IPR014722 Ribosomal protein L2 domain 2 AU28_RS16900 IPR000218 Ribosomal protein L14b/L23e AU28_RS16900 IPR005745 Ribosomal protein L14, bacterial-type AU28_RS16900 IPR019972 Ribosomal protein L14 conserved site AU28_RS16905 IPR000266 Ribosomal protein S17 AU28_RS16905 IPR012340 Nucleic acid-binding, OB-fold AU28_RS16905 IPR019979 Ribosomal protein S17, conserved site AU28_RS16905 IPR019984 Ribosomal protein S17, bacterial-type AU28_RS16910 IPR001854 Ribosomal protein L29 AU28_RS16910 IPR018254 Ribosomal protein L29, conserved site AU28_RS16915 IPR000114 Ribosomal protein L16 AU28_RS16915 IPR016180 Ribosomal protein L10e/L16 AU28_RS16915 IPR020798 Ribosomal protein L16, conserved site AU28_RS16920 IPR001351 Ribosomal protein S3, C-terminal AU28_RS16920 IPR004044 K Homology domain, type 2 AU28_RS16920 IPR004087 K Homology domain AU28_RS16920 IPR005704 Ribosomal protein S3, bacterial AU28_RS16920 IPR009019 K homology domain, prokaryotic type AU28_RS16920 IPR015946 K homology domain-like, alpha/beta AU28_RS16920 IPR018280 Ribosomal protein S3, conserved site AU28_RS16925 IPR001063 Ribosomal protein L22/L17 AU28_RS16925 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type AU28_RS16925 IPR018260 Ribosomal protein L22/L17, conserved site AU28_RS16930 IPR002222 Ribosomal protein S19/S15 AU28_RS16930 IPR005732 Ribosomal protein S19, bacterial-type AU28_RS16930 IPR020934 Ribosomal protein S19 conserved site AU28_RS16930 IPR023575 Ribosomal protein S19, superfamily AU28_RS16935 IPR002171 Ribosomal protein L2 AU28_RS16935 IPR005880 Ribosomal protein L2, bacterial/organellar-type AU28_RS16935 IPR008991 Translation protein SH3-like domain AU28_RS16935 IPR012340 Nucleic acid-binding, OB-fold AU28_RS16935 IPR014722 Ribosomal protein L2 domain 2 AU28_RS16935 IPR014726 Ribosomal protein L2, domain 3 AU28_RS16935 IPR022666 Ribosomal Proteins L2, RNA binding domain AU28_RS16935 IPR022669 Ribosomal protein L2, C-terminal AU28_RS16935 IPR022671 Ribosomal protein L2, conserved site AU28_RS16940 IPR001014 Ribosomal protein L23/L25, conserved site AU28_RS16940 IPR012677 Nucleotide-binding, alpha-beta plait AU28_RS16940 IPR012678 Ribosomal protein L23/L15e core domain AU28_RS16940 IPR013025 Ribosomal protein L25/L23 AU28_RS16945 IPR002136 Ribosomal protein L4/L1e AU28_RS16945 IPR013005 Ribosomal protein L4/L1e, bacterial-type AU28_RS16945 IPR023574 Ribosomal protein L4 domain AU28_RS16950 IPR000597 Ribosomal protein L3 AU28_RS16950 IPR009000 Translation protein, beta-barrel domain AU28_RS16950 IPR019926 Ribosomal protein L3, conserved site AU28_RS16950 IPR019927 Ribosomal protein L3, bacterial/organelle-type AU28_RS16955 IPR001848 Ribosomal protein S10 AU28_RS16955 IPR018268 Ribosomal protein S10, conserved site AU28_RS16955 IPR027486 Ribosomal protein S10 domain AU28_RS16960 IPR000045 Prepilin type IV endopeptidase, peptidase domain AU28_RS16960 IPR014032 Peptidase A24A, prepilin type IV, bacterial AU28_RS16965 IPR002024 Bacterioferritin AU28_RS16965 IPR008331 Ferritin/DPS protein domain AU28_RS16965 IPR009078 Ferritin-like superfamily AU28_RS16965 IPR012347 Ferritin-related AU28_RS16970 IPR007419 BFD-like [2Fe-2S]-binding domain AU28_RS16975 IPR000795 Elongation factor, GTP-binding domain AU28_RS16975 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AU28_RS16975 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AU28_RS16975 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AU28_RS16975 IPR005225 Small GTP-binding protein domain AU28_RS16975 IPR009000 Translation protein, beta-barrel domain AU28_RS16975 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AU28_RS16975 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS16975 IPR031157 AU28_RS16975 AU28_RS16980 IPR000640 Translation elongation factor EFG, V domain AU28_RS16980 IPR000795 Elongation factor, GTP-binding domain AU28_RS16980 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AU28_RS16980 IPR004540 Translation elongation factor EFG/EF2 AU28_RS16980 IPR005225 Small GTP-binding protein domain AU28_RS16980 IPR005517 Translation elongation factor EFG/EF2, domain IV AU28_RS16980 IPR009000 Translation protein, beta-barrel domain AU28_RS16980 IPR009022 Elongation factor G, III-V domain AU28_RS16980 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS16980 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS16980 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS16980 IPR031157 AU28_RS16980 AU28_RS16985 IPR000235 Ribosomal protein S5/S7 AU28_RS16985 IPR005717 Ribosomal protein S7, bacterial/organellar-type AU28_RS16985 IPR020606 Ribosomal protein S7, conserved site AU28_RS16985 IPR023798 Ribosomal protein S7 domain AU28_RS16990 IPR005679 Ribosomal protein S12, bacteria AU28_RS16990 IPR006032 Ribosomal protein S12/S23 AU28_RS16990 IPR012340 Nucleic acid-binding, OB-fold AU28_RS16995 IPR007215 Sulphur relay, TusB/DsrH AU28_RS16995 IPR023526 Sulphur relay, TusB AU28_RS16995 IPR027396 DsrEFH-like AU28_RS17000 IPR003787 Sulphur relay, DsrE/F-like protein AU28_RS17000 IPR017462 Sulphur relay, TusC/DsrF AU28_RS17000 IPR027396 DsrEFH-like AU28_RS17005 IPR003787 Sulphur relay, DsrE/F-like protein AU28_RS17005 IPR017463 Sulphur relay, TusD/DsrE AU28_RS17005 IPR027396 DsrEFH-like AU28_RS17010 IPR013559 YheO-like AU28_RS17015 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AU28_RS17015 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AU28_RS17015 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type AU28_RS17020 IPR007236 SlyX AU28_RS17025 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AU28_RS17025 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type AU28_RS17030 IPR012658 Conserved hypothetical protein CHP02443 AU28_RS17030 IPR013088 Zinc finger, NHR/GATA-type AU28_RS17035 IPR003148 Regulator of K+ conductance, N-terminal AU28_RS17035 IPR004771 K+/H+ exchanger AU28_RS17035 IPR006036 Potassium uptake protein TrkA AU28_RS17035 IPR006153 Cation/H+ exchanger AU28_RS17035 IPR016040 NAD(P)-binding domain AU28_RS17035 IPR020884 Glutathione-regulated potassium-efflux system protein KefB AU28_RS17040 IPR003680 Flavodoxin-like fold AU28_RS17040 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG AU28_RS17040 IPR029039 Flavoprotein-like AU28_RS17045 IPR003439 ABC transporter-like AU28_RS17045 IPR003593 AAA+ ATPase domain AU28_RS17045 IPR017871 ABC transporter, conserved site AU28_RS17045 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17045 IPR032781 AU28_RS17045 AU28_RS17055 IPR011008 Dimeric alpha-beta barrel AU28_RS17055 IPR014910 Mono-oxygenase, YdhR AU28_RS17060 IPR000073 Alpha/beta hydrolase fold-1 AU28_RS17060 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site AU28_RS17060 IPR012020 AB-hydrolase YheT, putative AU28_RS17060 IPR029058 Alpha/Beta hydrolase fold AU28_RS17065 IPR010648 Uncharacterised protein family UPF0270 AU28_RS17070 IPR006082 Phosphoribulokinase AU28_RS17070 IPR006083 Phosphoribulokinase/uridine kinase AU28_RS17070 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17075 IPR003718 OsmC/Ohr family AU28_RS17075 IPR015946 K homology domain-like, alpha/beta AU28_RS17080 IPR000595 Cyclic nucleotide-binding domain AU28_RS17080 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17080 IPR012318 Helix-turn-helix motif, Crp-type AU28_RS17080 IPR014710 RmlC-like jelly roll fold AU28_RS17080 IPR018335 Transcription regulator HTH, Crp-type, conserved site AU28_RS17080 IPR018488 Cyclic nucleotide-binding, conserved site AU28_RS17080 IPR018490 Cyclic nucleotide-binding-like AU28_RS17085 IPR010020 Integral membrane protein, YccS/YhfK AU28_RS17085 IPR032692 AU28_RS17085 AU28_RS17090 IPR004636 Acetylornithine/Succinylornithine transaminase family AU28_RS17090 IPR005814 Aminotransferase class-III AU28_RS17090 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS17090 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS17090 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS17090 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria AU28_RS17095 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AU28_RS17095 IPR017926 Glutamine amidotransferase AU28_RS17095 IPR029062 Class I glutamine amidotransferase-like AU28_RS17100 IPR003812 Fido domain AU28_RS17105 IPR022541 Protein of unknown function DUF2559 AU28_RS17110 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AU28_RS17110 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AU28_RS17110 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AU28_RS17110 IPR029000 Cyclophilin-like domain AU28_RS17115 IPR011701 Major facilitator superfamily AU28_RS17115 IPR020846 Major facilitator superfamily domain AU28_RS17115 IPR023528 Major facilitator superfamily transporter, TsgA AU28_RS17120 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AU28_RS17120 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site AU28_RS17120 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AU28_RS17120 IPR007419 BFD-like [2Fe-2S]-binding domain AU28_RS17120 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AU28_RS17120 IPR017121 Nitrite reductase [NAD(P)H], large subunit AU28_RS17120 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS17125 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD AU28_RS17125 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AU28_RS17130 IPR000292 Formate/nitrite transporter AU28_RS17130 IPR023271 Aquaporin-like AU28_RS17130 IPR024002 Formate/nitrite transporter, conserved site AU28_RS17135 IPR000878 Tetrapyrrole methylase AU28_RS17135 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AU28_RS17135 IPR006366 Uroporphyrin-III C-methyltransferase AU28_RS17135 IPR006367 Sirohaem synthase, N-terminal AU28_RS17135 IPR012409 Sirohaem synthase AU28_RS17135 IPR014776 Tetrapyrrole methylase, subdomain 2 AU28_RS17135 IPR014777 Tetrapyrrole methylase, subdomain 1 AU28_RS17135 IPR016040 NAD(P)-binding domain AU28_RS17135 IPR019478 Sirohaem synthase, dimerisation domain AU28_RS17135 IPR028281 Siroheme synthase, central domain AU28_RS17140 IPR005546 Autotransporter beta-domain AU28_RS17145 IPR025318 Protein of unknown function DUF4223 AU28_RS17150 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AU28_RS17150 IPR002305 Aminoacyl-tRNA synthetase, class Ic AU28_RS17150 IPR002306 Tryptophan-tRNA ligase AU28_RS17150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS17150 IPR024109 Tryptophan-tRNA ligase, bacterial-type AU28_RS17155 IPR006346 2-phosphoglycolate phosphatase, prokaryotic AU28_RS17155 IPR006439 HAD hydrolase, subfamily IA AU28_RS17155 IPR023198 Phosphoglycolate phosphatase, domain 2 AU28_RS17155 IPR023214 HAD-like domain AU28_RS17160 IPR000056 Ribulose-phosphate 3-epimerase-like AU28_RS17160 IPR011060 Ribulose-phosphate binding barrel AU28_RS17160 IPR013785 Aldolase-type TIM barrel AU28_RS17160 IPR026019 Ribulose-phosphate 3-epimerase AU28_RS17165 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS17165 IPR012263 Adenine modification methylase, M.EcoRV-type AU28_RS17165 IPR012327 D12 class N6 adenine-specific DNA methyltransferase AU28_RS17165 IPR023095 Adenine-specific methyltransferase, domain 2 AU28_RS17165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS17170 IPR007730 Sporulation-related domain AU28_RS17170 IPR032899 AU28_RS17170 AU28_RS17175 IPR016037 3-dehydroquinate synthase AroB AU28_RS17175 IPR030960 AU28_RS17175 AU28_RS17175 IPR030963 AU28_RS17175 AU28_RS17180 IPR000623 Shikimate kinase/Threonine synthase-like 1 AU28_RS17180 IPR023000 Shikimate kinase, conserved site AU28_RS17180 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17180 IPR031322 AU28_RS17180 AU28_RS17185 IPR001775 GspD/PilQ family AU28_RS17185 IPR004845 Type II secretion system GspD, conserved site AU28_RS17185 IPR004846 Type II/III secretion system AU28_RS17185 IPR005644 NolW-like AU28_RS17185 IPR011662 Secretin/TonB, short N-terminal AU28_RS17185 IPR013355 Type IV pilus secretin PilQ AU28_RS17190 IPR019684 Protein of unknown function DUF2531 AU28_RS17200 IPR007813 Fimbrial assembly PilN AU28_RS17210 IPR001264 Glycosyl transferase, family 51 AU28_RS17210 IPR001460 Penicillin-binding protein, transpeptidase AU28_RS17210 IPR012338 Beta-lactamase/transpeptidase-like AU28_RS17210 IPR012340 Nucleic acid-binding, OB-fold AU28_RS17210 IPR023346 Lysozyme-like domain AU28_RS17210 IPR031376 AU28_RS17210 AU28_RS17215 IPR000086 NUDIX hydrolase domain AU28_RS17215 IPR015797 NUDIX hydrolase domain-like AU28_RS17215 IPR020084 NUDIX hydrolase, conserved site AU28_RS17220 IPR010771 Intracellular growth attenuator IgaA AU28_RS17225 IPR006439 HAD hydrolase, subfamily IA AU28_RS17225 IPR023214 HAD-like domain AU28_RS17230 IPR002942 RNA-binding S4 domain AU28_RS17230 IPR025708 Heat shock protein 15 AU28_RS17235 IPR000397 Heat shock protein Hsp33 AU28_RS17235 IPR016153 Heat shock protein Hsp33, N-terminal AU28_RS17235 IPR016154 Heat shock protein Hsp33, C-terminal AU28_RS17235 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain AU28_RS17240 IPR025291 Protein of unknown function DUF4153 AU28_RS17245 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising AU28_RS17245 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal AU28_RS17245 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal AU28_RS17245 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site AU28_RS17250 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS17250 IPR003660 HAMP linker domain AU28_RS17250 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS17250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS17255 IPR001789 Signal transduction response regulator, receiver domain AU28_RS17255 IPR001867 Signal transduction response regulator, C-terminal AU28_RS17255 IPR011006 CheY-like superfamily AU28_RS17255 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17255 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS17260 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AU28_RS17260 IPR006358 Transcription elongation factor GreB AU28_RS17260 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AU28_RS17260 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AU28_RS17260 IPR023459 Transcription elongation factor GreA/GreB family AU28_RS17260 IPR028624 Transcription elongation factor GreA/GreB AU28_RS17265 IPR003029 Ribosomal protein S1, RNA-binding domain AU28_RS17265 IPR006641 YqgF/RNase H-like domain AU28_RS17265 IPR010994 RuvA domain 2-like AU28_RS17265 IPR012337 Ribonuclease H-like domain AU28_RS17265 IPR012340 Nucleic acid-binding, OB-fold AU28_RS17265 IPR018974 Tex-like protein, N-terminal AU28_RS17265 IPR022967 RNA-binding domain, S1 AU28_RS17265 IPR023097 Tex RuvX-like domain AU28_RS17265 IPR023319 Tex-like protein, HTH domain AU28_RS17265 IPR023323 Tex-like domain AU28_RS17265 IPR032639 AU28_RS17265 AU28_RS17270 IPR007167 Ferrous iron transporter FeoA domain AU28_RS17270 IPR008988 Transcriptional repressor, C-terminal AU28_RS17275 IPR003373 Ferrous iron transport protein B AU28_RS17275 IPR005225 Small GTP-binding protein domain AU28_RS17275 IPR011619 Ferrous iron transport protein B, N-terminal AU28_RS17275 IPR011640 Ferrous iron transport protein B, C-terminal AU28_RS17275 IPR011642 Nucleoside recognition Gate AU28_RS17275 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17280 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17280 IPR015102 Transcriptional regulator HTH-type, FeoC AU28_RS17280 IPR023732 Ferrous iron transport protein C AU28_RS17285 IPR006842 Transposase (putative), YhgA-like AU28_RS17285 IPR010106 Conserved hypothetical protein CHP01784 AU28_RS17290 IPR000073 Alpha/beta hydrolase fold-1 AU28_RS17290 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase AU28_RS17290 IPR029058 Alpha/Beta hydrolase fold AU28_RS17295 IPR000836 Phosphoribosyltransferase domain AU28_RS17295 IPR005222 Competence protein ComF AU28_RS17295 IPR029057 Phosphoribosyltransferase-like AU28_RS17300 IPR000361 FeS cluster biogenesis AU28_RS17300 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal AU28_RS17300 IPR017726 Fe/S biogenesis protein NfuA AU28_RS17305 IPR003474 Gluconate transporter AU28_RS17310 IPR003385 Glycoside hydrolase, family 77 AU28_RS17310 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS17310 IPR017853 Glycoside hydrolase, superfamily AU28_RS17315 IPR000811 Glycosyl transferase, family 35 AU28_RS17315 IPR011833 Glycogen/starch/alpha-glucan phosphorylase AU28_RS17320 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS17320 IPR011990 Tetratricopeptide-like helical domain AU28_RS17320 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17320 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS17320 IPR023768 Transcriptional regulator HTH-type, MalT AU28_RS17320 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17325 IPR004386 Toxin-antitoxin system, YafQ-like toxin AU28_RS17325 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AU28_RS17330 IPR007337 RelB antitoxin/Antitoxin DinJ AU28_RS17330 IPR026262 Antitoxin DinJ AU28_RS17335 IPR000228 RNA 3'-terminal phosphate cyclase AU28_RS17335 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain AU28_RS17335 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AU28_RS17335 IPR017770 RNA 3'-terminal phosphate cyclase type 1 AU28_RS17335 IPR023797 RNA 3'-terminal phosphate cyclase domain AU28_RS17340 IPR001233 tRNA-splicing ligase, RtcB AU28_RS17345 IPR002035 von Willebrand factor, type A AU28_RS17345 IPR008858 TROVE AU28_RS17350 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS17350 IPR003593 AAA+ ATPase domain AU28_RS17350 IPR009715 Regulator of RNA terminal phosphate cyclase AU28_RS17350 IPR017183 Sigma54-dependent transcriptional activator, RtcR AU28_RS17350 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS17350 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17355 IPR001034 HTH DeoR N-terminal domain AU28_RS17355 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17355 IPR014036 DeoR C-terminal sensor domain AU28_RS17355 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS17360 IPR002610 Peptidase S54, rhomboid AU28_RS17360 IPR022732 Peptidase S54, GlpG peptidase, N-terminal AU28_RS17360 IPR022764 Peptidase S54, rhomboid domain AU28_RS17360 IPR023662 Rhomboid protease GlpG AU28_RS17365 IPR001763 Rhodanese-like domain AU28_RS17365 IPR023695 Thiosulfate sulfurtransferase, bacterial AU28_RS17370 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase AU28_RS17370 IPR006076 FAD dependent oxidoreductase AU28_RS17370 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS17370 IPR031656 AU28_RS17370 AU28_RS17380 IPR024370 PBP domain AU28_RS17385 IPR001670 Alcohol dehydrogenase, iron-type AU28_RS17385 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AU28_RS17390 IPR011701 Major facilitator superfamily AU28_RS17390 IPR020846 Major facilitator superfamily domain AU28_RS17395 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AU28_RS17395 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AU28_RS17395 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AU28_RS17400 IPR002220 DapA-like AU28_RS17400 IPR013785 Aldolase-type TIM barrel AU28_RS17400 IPR020625 Dihydrodipicolinate synthetase, active site AU28_RS17405 IPR005471 Transcription regulator IclR, N-terminal AU28_RS17405 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17405 IPR014757 Transcription regulator IclR, C-terminal AU28_RS17405 IPR029016 GAF domain-like AU28_RS17410 IPR000811 Glycosyl transferase, family 35 AU28_RS17410 IPR011833 Glycogen/starch/alpha-glucan phosphorylase AU28_RS17415 IPR001296 Glycosyl transferase, family 1 AU28_RS17415 IPR011835 Glycogen/starch synthase, ADP-glucose type AU28_RS17415 IPR013534 Starch synthase, catalytic domain AU28_RS17420 IPR005835 Nucleotidyl transferase AU28_RS17420 IPR005836 ADP-glucose pyrophosphorylase, conserved site AU28_RS17420 IPR011004 Trimeric LpxA-like AU28_RS17420 IPR011831 Glucose-1-phosphate adenylyltransferase AU28_RS17420 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial AU28_RS17420 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS17425 IPR004193 Glycoside hydrolase, family 13, N-terminal AU28_RS17425 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AU28_RS17425 IPR011837 Glycogen debranching enzyme, GlgX type AU28_RS17425 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS17425 IPR013783 Immunoglobulin-like fold AU28_RS17425 IPR014756 Immunoglobulin E-set AU28_RS17425 IPR015902 Glycoside hydrolase, family 13 AU28_RS17425 IPR017853 Glycoside hydrolase, superfamily AU28_RS17425 IPR022844 Glycogen debranching enzyme, bacterial AU28_RS17430 IPR004193 Glycoside hydrolase, family 13, N-terminal AU28_RS17430 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AU28_RS17430 IPR006048 Alpha-amylase, C-terminal all beta AU28_RS17430 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB AU28_RS17430 IPR013780 Glycosyl hydrolase, family 13, all-beta AU28_RS17430 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS17430 IPR013783 Immunoglobulin-like fold AU28_RS17430 IPR014756 Immunoglobulin E-set AU28_RS17430 IPR015902 Glycoside hydrolase, family 13 AU28_RS17430 IPR017853 Glycoside hydrolase, superfamily AU28_RS17435 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site AU28_RS17435 IPR000534 Semialdehyde dehydrogenase, NAD-binding AU28_RS17435 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type AU28_RS17435 IPR012080 Aspartate-semialdehyde dehydrogenase AU28_RS17435 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AU28_RS17435 IPR016040 NAD(P)-binding domain AU28_RS17440 IPR003474 Gluconate transporter AU28_RS17445 IPR006001 Carbohydrate kinase, thermoresistant glucokinase AU28_RS17445 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17445 IPR031322 AU28_RS17445 AU28_RS17450 IPR000843 Transcription regulator HTH, LacI AU28_RS17450 IPR001761 Periplasmic binding protein/LacI sugar binding domain AU28_RS17450 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS17450 IPR028082 Periplasmic binding protein-like I AU28_RS17455 IPR003829 Pirin, N-terminal domain AU28_RS17455 IPR011051 RmlC-like cupin domain AU28_RS17455 IPR012093 Pirin AU28_RS17455 IPR014710 RmlC-like jelly roll fold AU28_RS17460 IPR000683 Oxidoreductase, N-terminal AU28_RS17460 IPR004104 Oxidoreductase, C-terminal AU28_RS17460 IPR016040 NAD(P)-binding domain AU28_RS17465 IPR000182 GNAT domain AU28_RS17465 IPR016181 Acyl-CoA N-acyltransferase AU28_RS17470 IPR001034 HTH DeoR N-terminal domain AU28_RS17470 IPR002139 Ribokinase AU28_RS17470 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS17470 IPR011611 Carbohydrate kinase PfkB AU28_RS17470 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17470 IPR029056 Ribokinase-like AU28_RS17475 IPR010768 Domain of unknown function DUF1355 AU28_RS17475 IPR017027 Uncharacterised conserved protein UCP034405 AU28_RS17475 IPR029062 Class I glutamine amidotransferase-like AU28_RS17480 IPR006750 Protein of unknown function DUF606 AU28_RS17480 IPR020846 Major facilitator superfamily domain AU28_RS17485 IPR001559 Aryldialkylphosphatase AU28_RS17485 IPR017947 Aryldialkylphosphatase, zinc-binding site AU28_RS17485 IPR032466 AU28_RS17485 AU28_RS17490 IPR000101 Gamma-glutamyltranspeptidase AU28_RS17490 IPR029055 Nucleophile aminohydrolases, N-terminal AU28_RS17495 IPR020158 Protein of unknown function DUF2756 AU28_RS17500 IPR004129 Glycerophosphoryl diester phosphodiesterase AU28_RS17500 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain AU28_RS17500 IPR030395 AU28_RS17500 AU28_RS17505 IPR003439 ABC transporter-like AU28_RS17505 IPR003593 AAA+ ATPase domain AU28_RS17505 IPR008995 Molybdate/tungstate binding, C-terminal AU28_RS17505 IPR012340 Nucleic acid-binding, OB-fold AU28_RS17505 IPR013611 Transport-associated OB, type 2 AU28_RS17505 IPR017871 ABC transporter, conserved site AU28_RS17505 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17510 IPR000515 MetI-like domain AU28_RS17510 IPR030165 AU28_RS17510 AU28_RS17515 IPR000515 MetI-like domain AU28_RS17520 IPR006061 Bacterial extracellular solute-binding family 1, conserved site AU28_RS17525 IPR003812 Fido domain AU28_RS17525 IPR006440 Death on curing protein AU28_RS17530 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AU28_RS17535 IPR003439 ABC transporter-like AU28_RS17535 IPR003593 AAA+ ATPase domain AU28_RS17535 IPR017871 ABC transporter, conserved site AU28_RS17535 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17535 IPR030660 AU28_RS17535 AU28_RS17540 IPR003439 ABC transporter-like AU28_RS17540 IPR003593 AAA+ ATPase domain AU28_RS17540 IPR017871 ABC transporter, conserved site AU28_RS17540 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17540 IPR032823 AU28_RS17540 AU28_RS17545 IPR001851 ABC transporter, permease AU28_RS17545 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AU28_RS17550 IPR001851 ABC transporter, permease AU28_RS17555 IPR000709 Leu/Ile/Val-binding protein AU28_RS17555 IPR028081 Leucine-binding protein domain AU28_RS17555 IPR028082 Periplasmic binding protein-like I AU28_RS17560 IPR000182 GNAT domain AU28_RS17560 IPR016181 Acyl-CoA N-acyltransferase AU28_RS17560 IPR032900 AU28_RS17560 AU28_RS17570 IPR000709 Leu/Ile/Val-binding protein AU28_RS17570 IPR028081 Leucine-binding protein domain AU28_RS17570 IPR028082 Periplasmic binding protein-like I AU28_RS17575 IPR000943 RNA polymerase sigma-70 AU28_RS17575 IPR007627 RNA polymerase sigma-70 region 2 AU28_RS17575 IPR007630 RNA polymerase sigma-70 region 4 AU28_RS17575 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17575 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria AU28_RS17575 IPR013324 RNA polymerase sigma factor, region 3/4 AU28_RS17575 IPR013325 RNA polymerase sigma factor, region 2 AU28_RS17575 IPR014284 RNA polymerase sigma-70 like domain AU28_RS17575 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE AU28_RS17580 IPR003838 Permease FtsX-like AU28_RS17580 IPR004513 ABC transporter, cell division protein FtsX AU28_RS17585 IPR003439 ABC transporter-like AU28_RS17585 IPR003593 AAA+ ATPase domain AU28_RS17585 IPR005286 Cell division protein FtsE, ATP-binding AU28_RS17585 IPR017871 ABC transporter, conserved site AU28_RS17585 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17590 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AU28_RS17590 IPR003593 AAA+ ATPase domain AU28_RS17590 IPR004390 Signal-recognition particle receptor FtsY AU28_RS17590 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle AU28_RS17590 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17595 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS17595 IPR004398 RNA methyltransferase, RsmD AU28_RS17595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS17600 IPR009525 Protein of unknown function DUF1145 AU28_RS17605 IPR019635 Protein of unknown function DUF2500 AU28_RS17610 IPR012506 YhhN-like AU28_RS17615 IPR001757 Cation-transporting P-type ATPase AU28_RS17615 IPR006121 Heavy metal-associated domain, HMA AU28_RS17615 IPR008250 P-type ATPase, A domain AU28_RS17615 IPR017969 Heavy-metal-associated, conserved site AU28_RS17615 IPR018303 P-type ATPase, phosphorylation site AU28_RS17615 IPR023214 HAD-like domain AU28_RS17615 IPR023299 P-type ATPase, cytoplasmic domain N AU28_RS17615 IPR027256 Cation-transporting P-type ATPase, subfamily IB AU28_RS17620 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding AU28_RS17620 IPR003660 HAMP linker domain AU28_RS17620 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AU28_RS17620 IPR004090 Chemotaxis methyl-accepting receptor AU28_RS17620 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AU28_RS17625 IPR001455 TusA-like domain AU28_RS17625 IPR022931 Sulphurtransferase TusA AU28_RS17630 IPR003744 Protein of unknown function DUF165 AU28_RS17635 IPR014894 Protein DcrB AU28_RS17635 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich AU28_RS17640 IPR011701 Major facilitator superfamily AU28_RS17640 IPR020846 Major facilitator superfamily domain AU28_RS17640 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily AU28_RS17645 IPR002549 Uncharacterised protein family UPF0118 AU28_RS17650 IPR008278 4'-phosphopantetheinyl transferase superfamily AU28_RS17655 IPR002145 Ribbon-helix-helix protein, copG AU28_RS17655 IPR010985 Ribbon-helix-helix AU28_RS17655 IPR013321 Arc-type ribbon-helix-helix AU28_RS17655 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria AU28_RS17655 IPR014864 Transcription factor, NikR, nickel binding C-terminal AU28_RS17655 IPR022988 Nickel-responsive transcriptional regulator NikR AU28_RS17665 IPR003439 ABC transporter-like AU28_RS17665 IPR003593 AAA+ ATPase domain AU28_RS17665 IPR017871 ABC transporter, conserved site AU28_RS17665 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17670 IPR003997 RTX secretion protein D, Gram-negative bacteria AU28_RS17675 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AU28_RS17675 IPR023166 HI0933 insert-like domain AU28_RS17675 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS17680 IPR001204 Phosphate transporter AU28_RS17685 IPR019598 Universal stress protein B AU28_RS17690 IPR006015 Universal stress protein A AU28_RS17690 IPR006016 UspA AU28_RS17690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS17695 IPR000109 Proton-dependent oligopeptide transporter family AU28_RS17695 IPR005279 Amino acid/peptide transporter family AU28_RS17695 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site AU28_RS17695 IPR020846 Major facilitator superfamily domain AU28_RS17695 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B AU28_RS17700 IPR007536 Ribosomal RNA small subunit methyltransferase J AU28_RS17700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS17705 IPR001567 Peptidase M3A/M3B AU28_RS17705 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AU28_RS17705 IPR024079 Metallopeptidase, catalytic domain AU28_RS17705 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AU28_RS17710 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AU28_RS17715 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS17715 IPR007473 Ribosomal RNA large subunit methyltransferase J AU28_RS17715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS17720 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AU28_RS17720 IPR006322 Glutathione reductase, eukaryote/bacterial AU28_RS17720 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AU28_RS17720 IPR016156 FAD/NAD-linked reductase, dimerisation domain AU28_RS17720 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS17725 IPR004550 L-asparaginase, type II AU28_RS17725 IPR006034 Asparaginase/glutaminase AU28_RS17725 IPR020827 Asparaginase/glutaminase, active site 1 AU28_RS17725 IPR027473 L-asparaginase, C-terminal domain AU28_RS17725 IPR027474 L-asparaginase, N-terminal AU28_RS17725 IPR027475 Asparaginase/glutaminase, active site 2 AU28_RS17730 IPR004668 Anaerobic c4-dicarboxylate membrane transporter AU28_RS17735 IPR011611 Carbohydrate kinase PfkB AU28_RS17735 IPR029056 Ribokinase-like AU28_RS17740 IPR001347 Sugar isomerase (SIS) AU28_RS17740 IPR024713 Fructosamine deglycase FrlB AU28_RS17745 IPR000524 Transcription regulator HTH, GntR AU28_RS17745 IPR011663 UbiC transcription regulator-associated AU28_RS17745 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17745 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AU28_RS17750 IPR001661 Glycoside hydrolase, family 37 AU28_RS17750 IPR008928 Six-hairpin glycosidase-like AU28_RS17750 IPR018232 Glycoside hydrolase, family 37, conserved site AU28_RS17750 IPR023715 Trehalase, cytoplasmic AU28_RS17760 IPR023346 Lysozyme-like domain AU28_RS17760 IPR023347 Lysozyme domain AU28_RS17765 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS17765 IPR011006 CheY-like superfamily AU28_RS17765 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17765 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS17770 IPR000847 Transcription regulator HTH, LysR AU28_RS17770 IPR005119 LysR, substrate-binding AU28_RS17770 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS17775 IPR005274 Inner membrane protein YhjD AU28_RS17775 IPR017039 Virulence factor BrkB AU28_RS17780 IPR004736 Citrate-proton symport AU28_RS17780 IPR005828 General substrate transporter AU28_RS17780 IPR005829 Sugar transporter, conserved site AU28_RS17780 IPR011701 Major facilitator superfamily AU28_RS17780 IPR020846 Major facilitator superfamily domain AU28_RS17785 IPR007844 AsmA AU28_RS17790 IPR001633 EAL domain AU28_RS17795 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS17795 IPR011611 Carbohydrate kinase PfkB AU28_RS17795 IPR029056 Ribokinase-like AU28_RS17800 IPR007863 Peptidase M16, C-terminal domain AU28_RS17800 IPR011237 Peptidase M16 domain AU28_RS17800 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AU28_RS17800 IPR011765 Peptidase M16, N-terminal AU28_RS17805 IPR001991 Sodium:dicarboxylate symporter AU28_RS17805 IPR018107 Sodium:dicarboxylate symporter, conserved site AU28_RS17805 IPR023954 C4-dicarboxylate transport protein AU28_RS17810 IPR000160 GGDEF domain AU28_RS17810 IPR001633 EAL domain AU28_RS17810 IPR003660 HAMP linker domain AU28_RS17810 IPR029787 Nucleotide cyclase AU28_RS17810 IPR033419 AU28_RS17810 AU28_RS17815 IPR008410 Cellulose synthase operon C, C-terminal AU28_RS17815 IPR011990 Tetratricopeptide-like helical domain AU28_RS17815 IPR019734 Tetratricopeptide repeat AU28_RS17820 IPR002037 Glycoside hydrolase, family 8 AU28_RS17820 IPR008928 Six-hairpin glycosidase-like AU28_RS17820 IPR012341 Six-hairpin glycosidase AU28_RS17820 IPR019834 Glycoside hydrolase, family 8, conserved site AU28_RS17825 IPR003920 Cellulose synthase, subunit B AU28_RS17825 IPR018513 Cellulose synthase BcsB, bacterial AU28_RS17830 IPR001173 Glycosyltransferase 2-like AU28_RS17830 IPR003919 Cellulose synthase, subunit A AU28_RS17830 IPR005150 Cellulose synthase AU28_RS17830 IPR009875 PilZ domain AU28_RS17830 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS17835 IPR017746 Cellulose synthase operon protein YhjQ AU28_RS17835 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17840 IPR024487 Protein of unknown function DUF2629 AU28_RS17845 IPR017745 Cellulose biosynthesis protein BcsE AU28_RS17850 IPR019995 Cellulose biosynthesis, BcsF/YhjT AU28_RS17855 IPR017744 Cellulose synthase operon protein YhjU AU28_RS17860 IPR025253 Type I toxin-antitoxin system, toxin Ldr AU28_RS17865 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AU28_RS17865 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS17865 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS17870 IPR018227 Tryptophan/tyrosine permease AU28_RS17875 IPR003439 ABC transporter-like AU28_RS17875 IPR003593 AAA+ ATPase domain AU28_RS17875 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AU28_RS17875 IPR017871 ABC transporter, conserved site AU28_RS17875 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17880 IPR003439 ABC transporter-like AU28_RS17880 IPR003593 AAA+ ATPase domain AU28_RS17880 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AU28_RS17880 IPR017871 ABC transporter, conserved site AU28_RS17880 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS17885 IPR000515 MetI-like domain AU28_RS17885 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AU28_RS17890 IPR000515 MetI-like domain AU28_RS17895 IPR000914 Bacterial extracellular solute-binding protein, family 5 AU28_RS17895 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site AU28_RS17895 IPR030678 AU28_RS17895 AU28_RS17900 IPR006043 Xanthine/uracil/vitamin C permease AU28_RS17905 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily AU28_RS17905 IPR027295 Quinonprotein alcohol dehydrogenase-like domain AU28_RS17910 IPR000843 Transcription regulator HTH, LacI AU28_RS17910 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS17910 IPR028082 Periplasmic binding protein-like I AU28_RS17930 IPR000917 Sulfatase AU28_RS17930 IPR012549 Domain of unknown function DUF1705 AU28_RS17930 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS17930 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS17935 IPR000259 Fimbrial-type adhesion domain AU28_RS17935 IPR008966 Adhesion domain AU28_RS17940 IPR000259 Fimbrial-type adhesion domain AU28_RS17940 IPR008966 Adhesion domain AU28_RS17945 IPR000015 Outer membrane usher protein AU28_RS17945 IPR018030 Fimbrial membrane usher, conserved site AU28_RS17945 IPR025885 PapC, N-terminal domain AU28_RS17945 IPR025949 PapC-like, C-terminal domain AU28_RS17950 IPR001829 Pili assembly chaperone, bacterial AU28_RS17950 IPR008962 PapD-like AU28_RS17950 IPR016147 PapD, N-terminal, bacterial AU28_RS17950 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS17950 IPR018046 Pili assembly chaperone, conserved site AU28_RS17955 IPR000259 Fimbrial-type adhesion domain AU28_RS17955 IPR008966 Adhesion domain AU28_RS17960 IPR005546 Autotransporter beta-domain AU28_RS17960 IPR006315 Outer membrane autotransporter barrel AU28_RS17960 IPR016955 Autotransporter, YhjY, predicted AU28_RS17965 IPR004597 DNA-3-methyladenine glycosylase I AU28_RS17965 IPR005019 Methyladenine glycosylase AU28_RS17965 IPR011257 DNA glycosylase AU28_RS17970 IPR000182 GNAT domain AU28_RS17970 IPR016181 Acyl-CoA N-acyltransferase AU28_RS17975 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS17975 IPR006656 Molybdopterin oxidoreductase AU28_RS17975 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS17975 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase AU28_RS17975 IPR009010 Aspartate decarboxylase-like domain AU28_RS17980 IPR006664 Outer membrane protein, bacterial AU28_RS17980 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AU28_RS17980 IPR006690 Outer membrane protein, OmpA-like, conserved site AU28_RS17985 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AU28_RS17985 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AU28_RS17985 IPR016040 NAD(P)-binding domain AU28_RS17985 IPR023756 Glyoxylate/hydroxypyruvate reductase B AU28_RS17985 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AU28_RS17990 IPR021413 Protein of unknown function DUF3053 AU28_RS17995 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS18000 IPR002059 Cold-shock protein, DNA-binding AU28_RS18000 IPR011129 Cold shock protein AU28_RS18000 IPR012156 Cold shock, CspA AU28_RS18000 IPR012340 Nucleic acid-binding, OB-fold AU28_RS18000 IPR019844 Cold-shock conserved site AU28_RS18010 IPR000182 GNAT domain AU28_RS18010 IPR016181 Acyl-CoA N-acyltransferase AU28_RS18015 IPR010985 Ribbon-helix-helix AU28_RS18015 IPR014795 Vibrio phage ICP1, Orf50 AU28_RS18020 IPR000182 GNAT domain AU28_RS18020 IPR016181 Acyl-CoA N-acyltransferase AU28_RS18025 IPR012337 Ribonuclease H-like domain AU28_RS18030 IPR008909 DALR anticodon binding AU28_RS18030 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AU28_RS18030 IPR015944 Glycine-tRNA ligase, beta subunit AU28_RS18035 IPR002310 Glycine-tRNA ligase, alpha subunit AU28_RS18040 IPR025728 YsaB-like lipoprotein AU28_RS18045 IPR002656 Acyltransferase 3 AU28_RS18045 IPR032905 AU28_RS18045 AU28_RS18050 IPR008024 YiaAB two helix AU28_RS18055 IPR000577 AU28_RS18055 AU28_RS18055 IPR006000 Xylulokinase AU28_RS18055 IPR018483 Carbohydrate kinase, FGGY, conserved site AU28_RS18055 IPR018484 Carbohydrate kinase, FGGY, N-terminal AU28_RS18055 IPR018485 Carbohydrate kinase, FGGY, C-terminal AU28_RS18060 IPR001998 Xylose isomerase AU28_RS18060 IPR013022 Xylose isomerase-like, TIM barrel domain AU28_RS18060 IPR013452 Xylose isomerase, bacterial-type AU28_RS18065 IPR009057 Homeodomain-like AU28_RS18065 IPR018060 DNA binding HTH domain, AraC-type AU28_RS18065 IPR020449 Transcription regulator HTH, AraC- type AU28_RS18065 IPR028082 Periplasmic binding protein-like I AU28_RS18070 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain AU28_RS18080 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AU28_RS18080 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS18080 IPR014635 Alpha-amylase, MalS type AU28_RS18080 IPR015902 Glycoside hydrolase, family 13 AU28_RS18080 IPR017853 Glycoside hydrolase, superfamily AU28_RS18085 IPR004839 Aminotransferase, class I/classII AU28_RS18085 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS18085 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS18085 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS18090 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS18090 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS18095 IPR005471 Transcription regulator IclR, N-terminal AU28_RS18095 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18095 IPR014757 Transcription regulator IclR, C-terminal AU28_RS18095 IPR029016 GAF domain-like AU28_RS18100 IPR003767 Malate/L-lactate dehydrogenase AU28_RS18100 IPR023689 2,3-diketo-L-gulonate reductase AU28_RS18105 IPR004375 Conserved hypothetical protein CHP00022 AU28_RS18110 IPR013022 Xylose isomerase-like, TIM barrel domain AU28_RS18110 IPR032344 AU28_RS18110 AU28_RS18115 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AU28_RS18120 IPR004681 TRAP transporter permease protein AU28_RS18120 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AU28_RS18125 IPR004682 TRAP dicarboxylate transporter AU28_RS18125 IPR018389 Bacterial extracellular solute-binding protein, family 7 AU28_RS18130 IPR000577 AU28_RS18130 AU28_RS18130 IPR018484 Carbohydrate kinase, FGGY, N-terminal AU28_RS18130 IPR018485 Carbohydrate kinase, FGGY, C-terminal AU28_RS18135 IPR001754 Orotidine 5'-phosphate decarboxylase domain AU28_RS18135 IPR011060 Ribulose-phosphate binding barrel AU28_RS18135 IPR013785 Aldolase-type TIM barrel AU28_RS18140 IPR004560 L-ribulose-5-phosphate 3-epimerase AU28_RS18140 IPR013022 Xylose isomerase-like, TIM barrel domain AU28_RS18145 IPR001303 Class II aldolase/adducin N-terminal AU28_RS18145 IPR004661 L-ribulose-5-phosphate 4-epimerase AU28_RS18150 IPR003313 AraC-type arabinose-binding/dimerisation domain AU28_RS18150 IPR009057 Homeodomain-like AU28_RS18150 IPR018060 DNA binding HTH domain, AraC-type AU28_RS18150 IPR018062 HTH domain AraC-type, conserved site AU28_RS18150 IPR020449 Transcription regulator HTH, AraC- type AU28_RS18155 IPR008928 Six-hairpin glycosidase-like AU28_RS18155 IPR012341 Six-hairpin glycosidase AU28_RS18155 IPR012878 Protein of unknown function DUF1680 AU28_RS18160 IPR015590 Aldehyde dehydrogenase domain AU28_RS18160 IPR016160 Aldehyde dehydrogenase, cysteine active site AU28_RS18160 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS18160 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS18160 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS18160 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AU28_RS18165 IPR000600 ROK AU28_RS18170 IPR000795 Elongation factor, GTP-binding domain AU28_RS18170 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AU28_RS18170 IPR004535 Translation elongation factor, selenocysteine-specific AU28_RS18170 IPR009000 Translation protein, beta-barrel domain AU28_RS18170 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AU28_RS18170 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18170 IPR015190 Translation elongation factor SelB, winged helix, type 2 AU28_RS18170 IPR015191 Translation elongation factor SelB, winged helix, type 3 AU28_RS18170 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS18170 IPR031157 AU28_RS18170 AU28_RS18175 IPR004534 L-seryl-tRNA selenium transferase AU28_RS18175 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS18175 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS18175 IPR018319 L-seryl-tRNA selenium transferase-like AU28_RS18175 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain AU28_RS18180 IPR004045 Glutathione S-transferase, N-terminal AU28_RS18180 IPR004046 Glutathione S-transferase, C-terminal AU28_RS18180 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS18180 IPR012336 Thioredoxin-like fold AU28_RS18185 IPR002178 PTS EIIA type-2 domain AU28_RS18185 IPR003352 Phosphotransferase system, EIIC AU28_RS18185 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS18185 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC AU28_RS18185 IPR016152 Phosphotransferase/anion transporter AU28_RS18185 IPR029503 Phosphotransferase system EIIB component, mannitol-specific AU28_RS18190 IPR000669 Mannitol dehydrogenase AU28_RS18190 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS18190 IPR013118 Mannitol dehydrogenase, C-terminal AU28_RS18190 IPR013131 Mannitol dehydrogenase, N-terminal AU28_RS18190 IPR013328 Dehydrogenase, multihelical AU28_RS18190 IPR016040 NAD(P)-binding domain AU28_RS18190 IPR023027 Mannitol dehydrogenase, conserved site AU28_RS18190 IPR023028 Mannitol-1-phosphate 5-dehydrogenase AU28_RS18195 IPR007761 Mannitol repressor AU28_RS18200 IPR009052 DNA polymerase III-theta, bacterial AU28_RS18200 IPR011326 Homologue of theta DNA polymerase III AU28_RS18205 IPR021230 Protein of unknown function DUF2810 AU28_RS18210 IPR021658 Domain of unknown function DUF3251 AU28_RS18215 IPR005594 YadA-like, C-terminal AU28_RS18215 IPR008635 Coiled stalk of trimeric autotransporter adhesin AU28_RS18215 IPR008640 Head domain of trimeric autotransporter adhesin AU28_RS18215 IPR011049 Serralysin-like metalloprotease, C-terminal AU28_RS18215 IPR024973 ESPR domain AU28_RS18220 IPR003804 L-lactate permease AU28_RS18225 IPR000524 Transcription regulator HTH, GntR AU28_RS18225 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS18225 IPR011711 GntR, C-terminal AU28_RS18225 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18230 IPR000262 FMN-dependent dehydrogenase AU28_RS18230 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AU28_RS18230 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AU28_RS18230 IPR013785 Aldolase-type TIM barrel AU28_RS18230 IPR020920 L-lactate dehydrogenase, bacterial AU28_RS18235 IPR001537 tRNA/rRNA methyltransferase, SpoU type AU28_RS18235 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase AU28_RS18235 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AU28_RS18235 IPR029028 Alpha/beta knot methyltransferases AU28_RS18240 IPR000843 Transcription regulator HTH, LacI AU28_RS18240 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS18240 IPR028082 Periplasmic binding protein-like I AU28_RS18245 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS18245 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AU28_RS18245 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS18245 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AU28_RS18245 IPR029017 Enolase N-terminal domain-like AU28_RS18245 IPR029065 Enolase C-terminal domain-like AU28_RS18250 IPR000849 Sugar phosphate transporter AU28_RS18250 IPR004744 D-galactonate transporter AU28_RS18250 IPR011701 Major facilitator superfamily AU28_RS18250 IPR020846 Major facilitator superfamily domain AU28_RS18255 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS18255 IPR005881 Serine O-acetyltransferase AU28_RS18255 IPR010493 Serine acetyltransferase, N-terminal AU28_RS18255 IPR011004 Trimeric LpxA-like AU28_RS18255 IPR018357 Hexapeptide transferase, conserved site AU28_RS18260 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal AU28_RS18260 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent AU28_RS18260 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS18260 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal AU28_RS18260 IPR013328 Dehydrogenase, multihelical AU28_RS18260 IPR016040 NAD(P)-binding domain AU28_RS18265 IPR003708 Bacterial protein export chaperone SecB AU28_RS18270 IPR002109 Glutaredoxin AU28_RS18270 IPR011767 Glutaredoxin active site AU28_RS18270 IPR011900 Glutaredoxin, GrxC AU28_RS18270 IPR012336 Thioredoxin-like fold AU28_RS18270 IPR014025 Glutaredoxin subgroup AU28_RS18275 IPR001763 Rhodanese-like domain AU28_RS18280 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent AU28_RS18280 IPR006124 Metalloenzyme AU28_RS18280 IPR011258 BPG-independent PGAM, N-terminal AU28_RS18280 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS18280 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS18285 IPR011055 Duplicated hybrid motif AU28_RS18285 IPR016047 Peptidase M23 AU28_RS18290 IPR002509 Polysaccharide deacetylase AU28_RS18290 IPR006837 Protein of unknown function DUF610, YibQ AU28_RS18290 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AU28_RS18295 IPR001173 Glycosyltransferase 2-like AU28_RS18295 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS18300 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS18300 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AU28_RS18300 IPR004627 L-threonine 3-dehydrogenase AU28_RS18300 IPR011032 GroES (chaperonin 10)-like AU28_RS18300 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS18300 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS18300 IPR016040 NAD(P)-binding domain AU28_RS18300 IPR020843 Polyketide synthase, enoylreductase AU28_RS18305 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AU28_RS18305 IPR004839 Aminotransferase, class I/classII AU28_RS18305 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase AU28_RS18305 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS18305 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS18305 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS18310 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AU28_RS18310 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase AU28_RS18310 IPR016040 NAD(P)-binding domain AU28_RS18315 IPR002201 Glycosyl transferase, family 9 AU28_RS18315 IPR011910 Lipopolysaccharide heptosyltransferase II AU28_RS18320 IPR002201 Glycosyl transferase, family 9 AU28_RS18320 IPR011908 Lipopolysaccharide heptosyltransferase I AU28_RS18325 IPR007016 O-antigen ligase-related AU28_RS18330 IPR001296 Glycosyl transferase, family 1 AU28_RS18335 IPR031026 AU28_RS18335 AU28_RS18340 IPR009330 Lipopolysaccharide core heptose(II) kinase AU28_RS18340 IPR011009 Protein kinase-like domain AU28_RS18345 IPR002495 Glycosyl transferase, family 8 AU28_RS18345 IPR013645 Glycosyl transferase, family 8, C-terminal AU28_RS18345 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS18350 IPR002495 Glycosyl transferase, family 8 AU28_RS18350 IPR013645 Glycosyl transferase, family 8, C-terminal AU28_RS18350 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS18355 IPR001296 Glycosyl transferase, family 1 AU28_RS18360 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS18365 IPR010440 Lipopolysaccharide kinase AU28_RS18365 IPR011009 Protein kinase-like domain AU28_RS18365 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP AU28_RS18370 IPR001296 Glycosyl transferase, family 1 AU28_RS18370 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AU28_RS18375 IPR002201 Glycosyl transferase, family 9 AU28_RS18375 IPR011916 Lipopolysaccharide heptosyltransferase III, putative AU28_RS18380 IPR001296 Glycosyl transferase, family 1 AU28_RS18380 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal AU28_RS18385 IPR001980 Coenzyme A biosynthesis protein AU28_RS18385 IPR004821 Cytidyltransferase-like domain AU28_RS18385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS18390 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase AU28_RS18390 IPR010979 Ribosomal protein S13-like, H2TH AU28_RS18390 IPR012319 DNA glycosylase/AP lyase, catalytic domain AU28_RS18390 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AU28_RS18390 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site AU28_RS18390 IPR020629 Formamidopyrimidine-DNA glycosylase AU28_RS18395 IPR001705 Ribosomal protein L33 AU28_RS18395 IPR011332 Zinc-binding ribosomal protein AU28_RS18395 IPR018264 Ribosomal protein L33, conserved site AU28_RS18400 IPR001383 Ribosomal protein L28 AU28_RS18400 IPR026569 Ribosomal protein L28/L24 AU28_RS18405 IPR001405 RadC protein AU28_RS18405 IPR010994 RuvA domain 2-like AU28_RS18405 IPR020891 Uncharacterised protein family UPF0758, conserved site AU28_RS18405 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily AU28_RS18405 IPR025657 RadC-like JAB domain AU28_RS18410 IPR003382 Flavoprotein AU28_RS18410 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AU28_RS18410 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AU28_RS18415 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase AU28_RS18415 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase AU28_RS18415 IPR029054 dUTPase-like AU28_RS18420 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS18420 IPR009057 Homeodomain-like AU28_RS18420 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS18420 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS18420 IPR023769 Nucleoid occlusion factor SlmA AU28_RS18420 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AU28_RS18425 IPR000836 Phosphoribosyltransferase domain AU28_RS18425 IPR004467 Orotate phosphoribosyl transferase domain AU28_RS18425 IPR023031 Orotate phosphoribosyltransferase AU28_RS18425 IPR029057 Phosphoribosyltransferase-like AU28_RS18430 IPR001247 Exoribonuclease, phosphorolytic domain 1 AU28_RS18430 IPR002381 Ribonuclease phosphorolytic, bacterial-type AU28_RS18430 IPR015847 Exoribonuclease, phosphorolytic domain 2 AU28_RS18430 IPR018336 Ribonuclease PH, conserved site AU28_RS18430 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS18430 IPR027408 PNPase/RNase PH domain AU28_RS18435 IPR005229 Conserved hypothetical protein CHP00255 AU28_RS18435 IPR013527 YicC-like, N-terminal AU28_RS18435 IPR013551 Domain of unknown function DUF1732 AU28_RS18440 IPR000847 Transcription regulator HTH, LysR AU28_RS18440 IPR005119 LysR, substrate-binding AU28_RS18440 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18445 IPR001279 Beta-lactamase-like AU28_RS18450 IPR005115 Uncharacterised domain UPF0126 AU28_RS18455 IPR004150 NAD-dependent DNA ligase, OB-fold AU28_RS18455 IPR010994 RuvA domain 2-like AU28_RS18455 IPR012340 Nucleic acid-binding, OB-fold AU28_RS18455 IPR013839 NAD-dependent DNA ligase, adenylation AU28_RS18455 IPR013840 NAD-dependent DNA ligase, N-terminal AU28_RS18455 IPR018239 NAD-dependent DNA ligase, active site AU28_RS18455 IPR020923 DNA ligase B AU28_RS18455 IPR033136 AU28_RS18455 AU28_RS18460 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AU28_RS18460 IPR017665 Guanylate kinase AU28_RS18460 IPR020590 Guanylate kinase, conserved site AU28_RS18460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS18465 IPR003716 DNA-directed RNA polymerase, omega subunit AU28_RS18465 IPR006110 RNA polymerase, subunit omega/K/RPB6 AU28_RS18465 IPR012293 RNA polymerase subunit, RPB6/omega AU28_RS18470 IPR002912 ACT domain AU28_RS18470 IPR003607 HD/PDEase domain AU28_RS18470 IPR004095 TGS AU28_RS18470 IPR004811 RelA/SpoT family AU28_RS18470 IPR007685 RelA/SpoT AU28_RS18470 IPR012675 Beta-grasp domain AU28_RS18470 IPR012676 TGS-like AU28_RS18475 IPR001537 tRNA/rRNA methyltransferase, SpoU type AU28_RS18475 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal AU28_RS18475 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AU28_RS18475 IPR029028 Alpha/beta knot methyltransferases AU28_RS18480 IPR001650 Helicase, C-terminal AU28_RS18480 IPR004609 ATP-dependent DNA helicase RecG AU28_RS18480 IPR011545 DEAD/DEAH box helicase domain AU28_RS18480 IPR012340 Nucleic acid-binding, OB-fold AU28_RS18480 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS18480 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS18480 IPR033454 AU28_RS18480 AU28_RS18485 IPR004445 Sodium/glutamate symporter AU28_RS18490 IPR006042 Xanthine/uracil permease AU28_RS18490 IPR006043 Xanthine/uracil/vitamin C permease AU28_RS18495 IPR007844 AsmA AU28_RS18500 IPR000322 Glycoside hydrolase, family 31 AU28_RS18500 IPR011013 Galactose mutarotase-like domain AU28_RS18500 IPR013785 Aldolase-type TIM barrel AU28_RS18500 IPR017853 Glycoside hydrolase, superfamily AU28_RS18500 IPR025887 Glycoside hydrolase family 31, N-terminal domain AU28_RS18505 IPR001927 Sodium:galactoside symporter AU28_RS18505 IPR018043 Sodium:galactoside symporter, conserved site AU28_RS18505 IPR020846 Major facilitator superfamily domain AU28_RS18530 IPR011204 Virulence protein RhuM-like AU28_RS18540 IPR004899 Pertactin, central region AU28_RS18540 IPR005546 Autotransporter beta-domain AU28_RS18540 IPR006315 Outer membrane autotransporter barrel AU28_RS18540 IPR011050 Pectin lyase fold/virulence factor AU28_RS18540 IPR012332 P22 tailspike C-terminal domain-like AU28_RS18550 IPR001867 Signal transduction response regulator, C-terminal AU28_RS18550 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18550 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS18555 IPR000868 Isochorismatase-like AU28_RS18565 IPR001757 Cation-transporting P-type ATPase AU28_RS18565 IPR004014 Cation-transporting P-type ATPase, N-terminal AU28_RS18565 IPR006068 Cation-transporting P-type ATPase, C-terminal AU28_RS18565 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB AU28_RS18565 IPR008250 P-type ATPase, A domain AU28_RS18565 IPR018303 P-type ATPase, phosphorylation site AU28_RS18565 IPR023214 HAD-like domain AU28_RS18565 IPR023298 P-type ATPase, transmembrane domain AU28_RS18565 IPR023299 P-type ATPase, cytoplasmic domain N AU28_RS18570 IPR003416 MgtC/SapB/SrpB transporter AU28_RS18575 IPR000620 Drug/metabolite transporter AU28_RS18580 IPR006842 Transposase (putative), YhgA-like AU28_RS18580 IPR010106 Conserved hypothetical protein CHP01784 AU28_RS18585 IPR010763 Protein of unknown function DUF1341 AU28_RS18585 IPR013785 Aldolase-type TIM barrel AU28_RS18590 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like AU28_RS18590 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS18590 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS18590 IPR018319 L-seryl-tRNA selenium transferase-like AU28_RS18595 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component AU28_RS18600 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit AU28_RS18605 IPR004720 Phosphotransferase system, sorbose subfamily IIB component AU28_RS18610 IPR004701 Phosphotransferase system, mannose-type IIA component AU28_RS18615 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS18615 IPR003593 AAA+ ATPase domain AU28_RS18615 IPR004701 Phosphotransferase system, mannose-type IIA component AU28_RS18615 IPR011608 PRD domain AU28_RS18615 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18615 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS18625 IPR001360 Glycoside hydrolase, family 1 AU28_RS18625 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS18625 IPR017853 Glycoside hydrolase, superfamily AU28_RS18625 IPR018120 Glycoside hydrolase, family 1, active site AU28_RS18630 IPR011701 Major facilitator superfamily AU28_RS18630 IPR020846 Major facilitator superfamily domain AU28_RS18630 IPR023680 Purine ribonucleoside efflux pump, NepI AU28_RS18635 IPR009387 Toxin HigB AU28_RS18640 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS18640 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS18645 IPR009587 Protein of unknown function DUF1198 AU28_RS18650 IPR000849 Sugar phosphate transporter AU28_RS18650 IPR011701 Major facilitator superfamily AU28_RS18650 IPR020846 Major facilitator superfamily domain AU28_RS18650 IPR021159 Glycerate/sugar phosphate transporter, conserved site AU28_RS18655 IPR000849 Sugar phosphate transporter AU28_RS18655 IPR011701 Major facilitator superfamily AU28_RS18655 IPR020846 Major facilitator superfamily domain AU28_RS18655 IPR021159 Glycerate/sugar phosphate transporter, conserved site AU28_RS18660 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS18660 IPR007895 MASE1 AU28_RS18660 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AU28_RS18665 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS18665 IPR001789 Signal transduction response regulator, receiver domain AU28_RS18665 IPR011006 CheY-like superfamily AU28_RS18665 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18665 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS18670 IPR011013 Galactose mutarotase-like domain AU28_RS18670 IPR027839 Protein of unknown function DUF4432 AU28_RS18675 IPR005275 L-fucose permease FucP AU28_RS18675 IPR011701 Major facilitator superfamily AU28_RS18675 IPR020846 Major facilitator superfamily domain AU28_RS18680 IPR002139 Ribokinase AU28_RS18680 IPR011611 Carbohydrate kinase PfkB AU28_RS18680 IPR011877 Ribokinase, bacterial AU28_RS18680 IPR029056 Ribokinase-like AU28_RS18685 IPR001034 HTH DeoR N-terminal domain AU28_RS18685 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18685 IPR014036 DeoR C-terminal sensor domain AU28_RS18685 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS18695 IPR000399 TPP-binding enzyme, conserved site AU28_RS18695 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AU28_RS18695 IPR012000 Thiamine pyrophosphate enzyme, central domain AU28_RS18695 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AU28_RS18695 IPR012846 Acetolactate synthase, large subunit, biosynthetic AU28_RS18695 IPR029035 DHS-like NAD/FAD-binding domain AU28_RS18695 IPR029061 Thiamin diphosphate-binding fold AU28_RS18700 IPR012566 IlvB leader peptide AU28_RS18705 IPR025211 Toxin TisB, type I toxin-antitoxin system AU28_RS18710 IPR000620 Drug/metabolite transporter AU28_RS18715 IPR004734 Multidrug resistance protein AU28_RS18715 IPR011701 Major facilitator superfamily AU28_RS18715 IPR020846 Major facilitator superfamily domain AU28_RS18720 IPR001547 Glycoside hydrolase, family 5 AU28_RS18720 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS18720 IPR017853 Glycoside hydrolase, superfamily AU28_RS18725 IPR000847 Transcription regulator HTH, LysR AU28_RS18725 IPR005119 LysR, substrate-binding AU28_RS18725 IPR011781 D-serine deaminase transcriptional activator AU28_RS18725 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18730 IPR003474 Gluconate transporter AU28_RS18735 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AU28_RS18735 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS18735 IPR011780 D-serine ammonia-lyase AU28_RS18740 IPR013785 Aldolase-type TIM barrel AU28_RS18745 IPR003807 Domain of unknown function DUF202 AU28_RS18745 IPR020264 Uncharacterised protein family YidG AU28_RS18750 IPR003807 Domain of unknown function DUF202 AU28_RS18755 IPR006037 Regulator of K+ conductance, C-terminal AU28_RS18755 IPR006512 YidE/YbjL duplication AU28_RS18755 IPR023018 Transport protein YidE, putative AU28_RS18760 IPR002068 Alpha crystallin/Hsp20 domain AU28_RS18760 IPR008978 HSP20-like chaperone AU28_RS18760 IPR022848 Small heat shock protein IbpB AU28_RS18760 IPR031107 AU28_RS18760 AU28_RS18765 IPR002068 Alpha crystallin/Hsp20 domain AU28_RS18765 IPR008978 HSP20-like chaperone AU28_RS18765 IPR023728 Small heat shock protein IbpA AU28_RS18765 IPR031107 AU28_RS18765 AU28_RS18770 IPR010780 Protein of unknown function DUF1375 AU28_RS18775 IPR011042 Six-bladed beta-propeller, TolB-like AU28_RS18775 IPR022223 Protein of unknown function DUF3748 AU28_RS18780 IPR005616 Cytochrome C biogenesis protein CcmH AU28_RS18780 IPR011990 Tetratricopeptide-like helical domain AU28_RS18785 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AU28_RS18785 IPR012336 Thioredoxin-like fold AU28_RS18785 IPR013740 Redoxin AU28_RS18785 IPR017937 Thioredoxin, conserved site AU28_RS18790 IPR002541 Cytochrome c assembly protein AU28_RS18790 IPR003567 Cytochrome c-type biogenesis protein AU28_RS18790 IPR003568 Cytochrome c-type biogenesis protein CcmF AU28_RS18790 IPR032523 AU28_RS18790 AU28_RS18795 IPR004329 CcmE/CycJ protein AU28_RS18795 IPR012340 Nucleic acid-binding, OB-fold AU28_RS18800 IPR007078 Haem exporter protein D (CcmD) AU28_RS18805 IPR002541 Cytochrome c assembly protein AU28_RS18805 IPR003557 Cytochrome c-type biogenesis protein CcmC AU28_RS18810 IPR003544 Cytochrome c-type biogenesis protein CcmB AU28_RS18810 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AU28_RS18815 IPR003439 ABC transporter-like AU28_RS18815 IPR003593 AAA+ ATPase domain AU28_RS18815 IPR005895 ABC transporter, haem export, CcmA AU28_RS18815 IPR017871 ABC transporter, conserved site AU28_RS18815 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS18820 IPR004852 Di-haem cytochrome c peroxidase AU28_RS18820 IPR009056 Cytochrome c-like domain AU28_RS18820 IPR025992 Haem-binding domain AU28_RS18825 IPR020945 DMSO/Nitrate reductase chaperone AU28_RS18825 IPR023069 Chaperone TorD AU28_RS18830 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS18830 IPR006656 Molybdopterin oxidoreductase AU28_RS18830 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS18830 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase AU28_RS18830 IPR009010 Aspartate decarboxylase-like domain AU28_RS18830 IPR011887 Trimethylamine-N-oxide reductase TorA AU28_RS18835 IPR005126 NapC/NirT cytochrome c, N-terminal AU28_RS18835 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK AU28_RS18835 IPR011031 Multihaem cytochrome AU28_RS18840 IPR001789 Signal transduction response regulator, receiver domain AU28_RS18840 IPR001867 Signal transduction response regulator, C-terminal AU28_RS18840 IPR011006 CheY-like superfamily AU28_RS18840 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18840 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS18845 IPR001761 Periplasmic binding protein/LacI sugar binding domain AU28_RS18845 IPR014301 TMAO reductase system periplasmic, TorT AU28_RS18845 IPR028082 Periplasmic binding protein-like I AU28_RS18850 IPR001789 Signal transduction response regulator, receiver domain AU28_RS18850 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS18850 IPR003660 HAMP linker domain AU28_RS18850 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS18850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS18850 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AU28_RS18850 IPR011006 CheY-like superfamily AU28_RS18850 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS AU28_RS18855 IPR000849 Sugar phosphate transporter AU28_RS18855 IPR004744 D-galactonate transporter AU28_RS18855 IPR011701 Major facilitator superfamily AU28_RS18855 IPR020846 Major facilitator superfamily domain AU28_RS18860 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS18860 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AU28_RS18860 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS18860 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AU28_RS18860 IPR023592 D-galactonate dehydratase AU28_RS18860 IPR029017 Enolase N-terminal domain-like AU28_RS18860 IPR029065 Enolase C-terminal domain-like AU28_RS18865 IPR000887 KDPG/KHG aldolase AU28_RS18865 IPR013785 Aldolase-type TIM barrel AU28_RS18870 IPR007729 2-keto-3-deoxy-galactonokinase AU28_RS18875 IPR000524 Transcription regulator HTH, GntR AU28_RS18875 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS18875 IPR011711 GntR, C-terminal AU28_RS18875 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18880 IPR000150 Cof protein AU28_RS18880 IPR006379 HAD-superfamily hydrolase, subfamily IIB AU28_RS18880 IPR023214 HAD-like domain AU28_RS18885 IPR011701 Major facilitator superfamily AU28_RS18885 IPR020846 Major facilitator superfamily domain AU28_RS18890 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase AU28_RS18890 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AU28_RS18890 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AU28_RS18890 IPR029017 Enolase N-terminal domain-like AU28_RS18890 IPR029065 Enolase C-terminal domain-like AU28_RS18895 IPR000847 Transcription regulator HTH, LysR AU28_RS18895 IPR005119 LysR, substrate-binding AU28_RS18895 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18900 IPR000565 DNA topoisomerase, type IIA, subunit B AU28_RS18900 IPR001241 DNA topoisomerase, type IIA AU28_RS18900 IPR002288 DNA gyrase B subunit, C-terminal AU28_RS18900 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS18900 IPR006171 Toprim domain AU28_RS18900 IPR011557 DNA gyrase, subunit B AU28_RS18900 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AU28_RS18900 IPR013759 DNA topoisomerase, type IIA, central domain AU28_RS18900 IPR013760 DNA topoisomerase, type IIA-like domain AU28_RS18900 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS18900 IPR018522 DNA topoisomerase, type IIA, conserved site AU28_RS18900 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS18905 IPR001238 DNA-binding, RecF AU28_RS18905 IPR003395 RecF/RecN/SMC, N-terminal AU28_RS18905 IPR018078 DNA-binding, RecF, conserved site AU28_RS18905 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS18910 IPR001001 DNA polymerase III, beta chain AU28_RS18910 IPR022634 DNA polymerase III, beta chain, N-terminal AU28_RS18910 IPR022635 DNA polymerase III, beta chain, C-terminal AU28_RS18910 IPR022637 DNA polymerase III, beta chain, central AU28_RS18915 IPR001957 Chromosomal replication control, initiator DnaA AU28_RS18915 IPR003593 AAA+ ATPase domain AU28_RS18915 IPR010921 Trp repressor/replication initiator AU28_RS18915 IPR013159 Chromosomal replication initiator, DnaA C-terminal AU28_RS18915 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) AU28_RS18915 IPR018312 Chromosomal replication control, initiator DnaA, conserved site AU28_RS18915 IPR020591 Chromosomal replication control, initiator DnaA-like AU28_RS18915 IPR024633 DnaA N-terminal domain AU28_RS18915 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS18920 IPR000271 Ribosomal protein L34 AU28_RS18920 IPR020939 Ribosomal protein L34, conserved site AU28_RS18925 IPR000100 Ribonuclease P AU28_RS18925 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS18925 IPR020539 Ribonuclease P, conserved site AU28_RS18925 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS18930 IPR002696 Putative membrane protein insertion efficiency factor AU28_RS18935 IPR001708 Membrane insertase OXA1/ALB3/YidC AU28_RS18935 IPR019998 Membrane insertase YidC AU28_RS18935 IPR028053 Membrane insertase YidC, N-terminal AU28_RS18935 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AU28_RS18940 IPR004520 tRNA modification GTPase MnmE AU28_RS18940 IPR005225 Small GTP-binding protein domain AU28_RS18940 IPR006073 GTP binding domain AU28_RS18940 IPR018948 GTP-binding protein TrmE, N-terminal AU28_RS18940 IPR025867 tRNA modification GTPase MnmE C-terminal domain AU28_RS18940 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AU28_RS18940 IPR027368 tRNA modification GTPase MnmE domain 2 AU28_RS18940 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS18945 IPR011701 Major facilitator superfamily AU28_RS18945 IPR020846 Major facilitator superfamily domain AU28_RS18945 IPR023697 Multidrug resistance protein MdtL AU28_RS18950 IPR000847 Transcription regulator HTH, LysR AU28_RS18950 IPR005119 LysR, substrate-binding AU28_RS18950 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS18950 IPR023746 Transcription regulator HTH, YidZ AU28_RS18955 IPR008278 4'-phosphopantetheinyl transferase superfamily AU28_RS18960 IPR005025 NADPH-dependent FMN reductase-like AU28_RS18960 IPR029039 Flavoprotein-like AU28_RS18965 IPR006043 Xanthine/uracil/vitamin C permease AU28_RS18965 IPR026033 Purine permease PbuG-like AU28_RS18965 IPR029940 AU28_RS18965 AU28_RS18970 IPR006439 HAD hydrolase, subfamily IA AU28_RS18970 IPR023198 Phosphoglycolate phosphatase, domain 2 AU28_RS18970 IPR023214 HAD-like domain AU28_RS18975 IPR026022 PhoU domain AU28_RS18975 IPR028366 Phosphate transport system protein PhoU AU28_RS18980 IPR003439 ABC transporter-like AU28_RS18980 IPR003593 AAA+ ATPase domain AU28_RS18980 IPR005670 Phosphate transport system permease protein 1 AU28_RS18980 IPR017871 ABC transporter, conserved site AU28_RS18980 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS18985 IPR000515 MetI-like domain AU28_RS18985 IPR005672 Phosphate transport system permease protein PstA AU28_RS18990 IPR000515 MetI-like domain AU28_RS18990 IPR011864 Phosphate ABC transporter, permease protein PstC AU28_RS18995 IPR005673 ABC transporter, phosphate-binding protein PstS AU28_RS18995 IPR024370 PBP domain AU28_RS19000 IPR003352 Phosphotransferase system, EIIC AU28_RS19000 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AU28_RS19000 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS19000 IPR006327 Phosphotransferase system, fructose IIC component AU28_RS19005 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AU28_RS19005 IPR016040 NAD(P)-binding domain AU28_RS19010 IPR000914 Bacterial extracellular solute-binding protein, family 5 AU28_RS19010 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AU28_RS19015 IPR001347 Sugar isomerase (SIS) AU28_RS19015 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AU28_RS19015 IPR029055 Nucleophile aminohydrolases, N-terminal AU28_RS19020 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS19020 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase AU28_RS19020 IPR011004 Trimeric LpxA-like AU28_RS19020 IPR018357 Hexapeptide transferase, conserved site AU28_RS19020 IPR025877 MobA-like NTP transferase domain AU28_RS19020 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS19025 IPR006214 Bax inhibitor 1-related AU28_RS19030 IPR001469 ATPase, F1 complex, delta/epsilon subunit AU28_RS19030 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal AU28_RS19030 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain AU28_RS19035 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AU28_RS19035 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal AU28_RS19035 IPR003593 AAA+ ATPase domain AU28_RS19035 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain AU28_RS19035 IPR005722 ATPase, F1 complex, beta subunit AU28_RS19035 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AU28_RS19035 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal AU28_RS19035 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19040 IPR000131 ATPase, F1 complex, gamma subunit AU28_RS19040 IPR023632 ATPase, F1 complex, gamma subunit conserved site AU28_RS19040 IPR023633 ATPase, F1 complex, gamma subunit domain AU28_RS19045 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AU28_RS19045 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal AU28_RS19045 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain AU28_RS19045 IPR005294 ATPase, F1 complex, alpha subunit AU28_RS19045 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AU28_RS19045 IPR023366 ATP synthase subunit alpha-like domain AU28_RS19045 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19050 IPR000711 ATPase, OSCP/delta subunit AU28_RS19050 IPR020781 ATPase, OSCP/delta subunit, conserved site AU28_RS19050 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AU28_RS19055 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast AU28_RS19055 IPR005864 ATPase, F0 complex, subunit B, bacterial AU28_RS19055 IPR028987 F-type ATP synthase subunit B-like, membrane domain AU28_RS19060 IPR000454 ATPase, F0 complex, subunit C AU28_RS19060 IPR002379 V-ATPase proteolipid subunit C-like domain AU28_RS19060 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast AU28_RS19060 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site AU28_RS19065 IPR000568 ATPase, F0 complex, subunit A AU28_RS19065 IPR023011 ATPase, F0 complex, subunit A, active site AU28_RS19070 IPR005598 ATP synthase protein I AU28_RS19075 IPR003682 rRNA small subunit methyltransferase G AU28_RS19075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS19080 IPR002218 Glucose-inhibited division protein A-related AU28_RS19080 IPR004416 Glucose-inhibited division protein A AU28_RS19080 IPR020595 Glucose-inhibited division protein A-related, conserved site AU28_RS19080 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS19080 IPR026904 GidA associated domain 3 AU28_RS19085 IPR008254 Flavodoxin/nitric oxide synthase AU28_RS19085 IPR029039 Flavoprotein-like AU28_RS19090 IPR000485 AsnC-type HTH domain AU28_RS19090 IPR011008 Dimeric alpha-beta barrel AU28_RS19090 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS19090 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AU28_RS19090 IPR019887 Transcription regulator AsnC-type, C-terminal AU28_RS19090 IPR019888 Transcription regulator AsnC-type AU28_RS19095 IPR004618 Aspartate--ammonia ligase AU28_RS19100 IPR002035 von Willebrand factor, type A AU28_RS19100 IPR008912 Uncharacterised protein family CoxE-like AU28_RS19100 IPR023481 Uncharacterised protein family ViaA AU28_RS19105 IPR003593 AAA+ ATPase domain AU28_RS19105 IPR011704 ATPase, dynein-related, AAA domain AU28_RS19105 IPR022547 ATPase, RavA, C-terminal AU28_RS19105 IPR023671 ATPase RavA AU28_RS19105 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19110 IPR003855 K+ potassium transporter AU28_RS19110 IPR023051 Potassium uptake protein, low affinity, Kup AU28_RS19115 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU AU28_RS19115 IPR023064 D-ribose pyranase AU28_RS19115 IPR023750 RbsD-like domain AU28_RS19120 IPR003439 ABC transporter-like AU28_RS19120 IPR003593 AAA+ ATPase domain AU28_RS19120 IPR017871 ABC transporter, conserved site AU28_RS19120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19125 IPR001851 ABC transporter, permease AU28_RS19130 IPR025997 Periplasmic binding protein domain AU28_RS19130 IPR028082 Periplasmic binding protein-like I AU28_RS19135 IPR002139 Ribokinase AU28_RS19135 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS19135 IPR011611 Carbohydrate kinase PfkB AU28_RS19135 IPR011877 Ribokinase, bacterial AU28_RS19135 IPR029056 Ribokinase-like AU28_RS19140 IPR000843 Transcription regulator HTH, LacI AU28_RS19140 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS19140 IPR028082 Periplasmic binding protein-like I AU28_RS19150 IPR000524 Transcription regulator HTH, GntR AU28_RS19150 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS19150 IPR011711 GntR, C-terminal AU28_RS19150 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS19185 IPR000847 Transcription regulator HTH, LysR AU28_RS19185 IPR005119 LysR, substrate-binding AU28_RS19185 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS19185 IPR020890 Transcription regulator HTH, HdfR AU28_RS19190 IPR007335 Protein of unknown function DUF413 AU28_RS19195 IPR000523 Magnesium chelatase, ChlI subunit AU28_RS19195 IPR003593 AAA+ ATPase domain AU28_RS19195 IPR004482 Mg chelatase-related protein AU28_RS19195 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS19195 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS19195 IPR025158 Mg chelatase-related protein, C-terminal domain AU28_RS19195 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS19195 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19200 IPR012567 IlvGEDA operon leader peptide AU28_RS19205 IPR000399 TPP-binding enzyme, conserved site AU28_RS19205 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AU28_RS19205 IPR012000 Thiamine pyrophosphate enzyme, central domain AU28_RS19205 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AU28_RS19205 IPR012846 Acetolactate synthase, large subunit, biosynthetic AU28_RS19205 IPR029035 DHS-like NAD/FAD-binding domain AU28_RS19205 IPR029061 Thiamin diphosphate-binding fold AU28_RS19215 IPR001544 Aminotransferase, class IV AU28_RS19215 IPR005785 Branched-chain amino acid aminotransferase I AU28_RS19215 IPR018300 Aminotransferase, class IV, conserved site AU28_RS19220 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AU28_RS19220 IPR004404 Dihydroxy-acid dehydratase AU28_RS19220 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AU28_RS19220 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AU28_RS19225 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AU28_RS19225 IPR001721 ACT-like domain AU28_RS19225 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AU28_RS19225 IPR005787 Threonine dehydratase, biosynthetic AU28_RS19230 IPR009241 Addiction module killer protein AU28_RS19235 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS19240 IPR000847 Transcription regulator HTH, LysR AU28_RS19240 IPR005119 LysR, substrate-binding AU28_RS19240 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS19245 IPR000506 Acetohydroxy acid isomeroreductase C-terminal AU28_RS19245 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS19245 IPR013023 Acetohydroxy acid isomeroreductase AU28_RS19245 IPR013116 Acetohydroxy acid isomeroreductase, catalytic AU28_RS19245 IPR013328 Dehydrogenase, multihelical AU28_RS19245 IPR016040 NAD(P)-binding domain AU28_RS19250 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AU28_RS19260 IPR000212 DNA helicase, UvrD/REP type AU28_RS19260 IPR005752 DNA helicase, ATP-dependent, RepA type AU28_RS19260 IPR013986 DExx box DNA helicase domain AU28_RS19260 IPR014016 UvrD-like Helicase, ATP-binding domain AU28_RS19260 IPR014017 DNA helicase, UvrD-like, C-terminal AU28_RS19260 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19265 IPR003695 Ppx/GppA phosphatase AU28_RS19265 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase AU28_RS19265 IPR030673 AU28_RS19265 AU28_RS19270 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AU28_RS19270 IPR001650 Helicase, C-terminal AU28_RS19270 IPR011545 DEAD/DEAH box helicase domain AU28_RS19270 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS19270 IPR023554 RNA helicase, ATP-dependent, RhlB-type AU28_RS19270 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19275 IPR005746 Thioredoxin AU28_RS19275 IPR012336 Thioredoxin-like fold AU28_RS19275 IPR013766 Thioredoxin domain AU28_RS19275 IPR017937 Thioredoxin, conserved site AU28_RS19280 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AU28_RS19280 IPR003593 AAA+ ATPase domain AU28_RS19280 IPR004665 Transcription termination factor Rho AU28_RS19280 IPR011112 Rho termination factor, N-terminal AU28_RS19280 IPR011113 Rho termination factor, RNA-binding AU28_RS19280 IPR011129 Cold shock protein AU28_RS19280 IPR012340 Nucleic acid-binding, OB-fold AU28_RS19280 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19285 IPR000715 Glycosyl transferase, family 4 AU28_RS19285 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase AU28_RS19290 IPR003856 Lipopolysaccharide biosynthesis AU28_RS19290 IPR032895 AU28_RS19290 AU28_RS19295 IPR003331 UDP-N-acetylglucosamine 2-epimerase AU28_RS19295 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type AU28_RS19295 IPR032892 AU28_RS19295 AU28_RS19300 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AU28_RS19300 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS19300 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AU28_RS19300 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AU28_RS19300 IPR016040 NAD(P)-binding domain AU28_RS19300 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AU28_RS19300 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase AU28_RS19300 IPR032891 AU28_RS19300 AU28_RS19305 IPR005888 dTDP-glucose 4,6-dehydratase AU28_RS19305 IPR016040 NAD(P)-binding domain AU28_RS19310 IPR005835 Nucleotidyl transferase AU28_RS19310 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS19315 IPR012752 TDP-D-fucosamine acetyltransferase WecD AU28_RS19315 IPR016181 Acyl-CoA N-acyltransferase AU28_RS19320 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AU28_RS19320 IPR012749 TDP-4-keto-6-deoxy-D-glucose transaminase AU28_RS19320 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS19320 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS19320 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS19320 IPR032894 AU28_RS19320 AU28_RS19325 IPR002797 Polysaccharide biosynthesis protein AU28_RS19325 IPR032896 AU28_RS19325 AU28_RS19330 IPR009993 4-alpha-L-fucosyltransferase AU28_RS19335 IPR010691 Uncharacterised protein family WzyE AU28_RS19340 IPR004629 Glycosyl transferase WecB/TagA/CpsF AU28_RS19340 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase AU28_RS19345 IPR002293 Amino acid/polyamine transporter I AU28_RS19345 IPR004840 Amino acid permease, conserved site AU28_RS19345 IPR004841 Amino acid permease/ SLC12A domain AU28_RS19370 IPR005254 Heme biosynthesis-associated TPR protein AU28_RS19370 IPR010817 HemY, N-terminal AU28_RS19370 IPR011990 Tetratricopeptide-like helical domain AU28_RS19370 IPR013105 Tetratricopeptide TPR2 AU28_RS19375 IPR007470 HemX AU28_RS19380 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase AU28_RS19385 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase AU28_RS19385 IPR022417 Porphobilinogen deaminase, N-terminal AU28_RS19385 IPR022418 Porphobilinogen deaminase, C-terminal AU28_RS19385 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site AU28_RS19390 IPR000274 Adenylate cyclase, class-I AU28_RS19390 IPR024685 Adenylate cyclase class-I, N-terminal domain AU28_RS19390 IPR024686 Adenylate cyclase class-I, conserved site AU28_RS19395 IPR002908 Frataxin/CyaY AU28_RS19395 IPR020895 Frataxin conserved site AU28_RS19400 IPR021560 Protein of unknown function DUF3021 AU28_RS19410 IPR032831 AU28_RS19410 AU28_RS19415 IPR001653 Diaminopimelate epimerase, DapF AU28_RS19415 IPR018510 Diaminopimelate epimerase, active site AU28_RS19420 IPR007435 Protein of unknown function DUF484 AU28_RS19425 IPR002104 Integrase, catalytic AU28_RS19425 IPR004107 Integrase, SAM-like, N-terminal AU28_RS19425 IPR010998 Integrase, Lambda-type, N-terminal AU28_RS19425 IPR011010 DNA breaking-rejoining enzyme, catalytic core AU28_RS19425 IPR011931 Tyrosine recombinase XerC AU28_RS19425 IPR013762 Integrase-like, catalytic core AU28_RS19425 IPR023009 Tyrosine recombinase XerC/XerD AU28_RS19425 IPR023109 Integrase/recombinase, N-terminal AU28_RS19430 IPR006439 HAD hydrolase, subfamily IA AU28_RS19430 IPR023214 HAD-like domain AU28_RS19435 IPR000212 DNA helicase, UvrD/REP type AU28_RS19435 IPR005753 DNA helicase, ATP-dependent, UvrD type AU28_RS19435 IPR013986 DExx box DNA helicase domain AU28_RS19435 IPR014016 UvrD-like Helicase, ATP-binding domain AU28_RS19435 IPR014017 DNA helicase, UvrD-like, C-terminal AU28_RS19435 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19440 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB AU28_RS19440 IPR004488 Magnesium/cobalt transport protein CorA AU28_RS19455 IPR000620 Drug/metabolite transporter AU28_RS19455 IPR004626 RarD protein AU28_RS19460 IPR003736 Phenylacetic acid degradation-related domain AU28_RS19460 IPR006683 Thioesterase superfamily AU28_RS19460 IPR029069 HotDog domain AU28_RS19465 IPR003187 Phospholipase A1 AU28_RS19470 IPR001650 Helicase, C-terminal AU28_RS19470 IPR002121 HRDC domain AU28_RS19470 IPR004589 DNA helicase, ATP-dependent, RecQ type AU28_RS19470 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial AU28_RS19470 IPR010997 HRDC-like AU28_RS19470 IPR011545 DEAD/DEAH box helicase domain AU28_RS19470 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS19470 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS19470 IPR018982 RQC domain AU28_RS19470 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19470 IPR032284 AU28_RS19470 AU28_RS19475 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AU28_RS19475 IPR004778 Homoserine/Threonine efflux protein AU28_RS19480 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AU28_RS19480 IPR004778 Homoserine/Threonine efflux protein AU28_RS19485 IPR022742 Putative lysophospholipase AU28_RS19485 IPR029058 Alpha/Beta hydrolase fold AU28_RS19490 IPR000150 Cof protein AU28_RS19490 IPR006379 HAD-superfamily hydrolase, subfamily IIB AU28_RS19490 IPR023214 HAD-like domain AU28_RS19495 IPR000620 Drug/metabolite transporter AU28_RS19495 IPR004779 Carboxylate/Amino Acid/Amine Transporter AU28_RS19500 IPR000847 Transcription regulator HTH, LysR AU28_RS19500 IPR005119 LysR, substrate-binding AU28_RS19500 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS19505 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AU28_RS19505 IPR006276 Cobalamin-independent methionine synthase AU28_RS19505 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal AU28_RS19510 IPR004027 SEC-C motif AU28_RS19510 IPR007197 Radical SAM AU28_RS19510 IPR013785 Aldolase-type TIM barrel AU28_RS19510 IPR023867 Anaerobic sulphatase maturase, radical SAM AU28_RS19510 IPR023885 4Fe4S-binding SPASM domain AU28_RS19510 IPR032710 AU28_RS19510 AU28_RS19515 IPR002925 Dienelactone hydrolase AU28_RS19515 IPR029058 Alpha/Beta hydrolase fold AU28_RS19520 IPR000845 Nucleoside phosphorylase domain AU28_RS19520 IPR010058 Uridine phosphorylase AU28_RS19520 IPR018016 Nucleoside phosphorylase, conserved site AU28_RS19520 IPR018017 Nucleoside phosphorylase AU28_RS19525 IPR003798 DNA recombination RmuC AU28_RS19530 IPR004033 UbiE/COQ5 methyltransferase AU28_RS19530 IPR023576 UbiE/COQ5 methyltransferase, conserved site AU28_RS19530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS19535 IPR003033 SCP2 sterol-binding domain AU28_RS19540 IPR004147 UbiB domain AU28_RS19540 IPR010232 Probable protein kinase UbiB AU28_RS19540 IPR011009 Protein kinase-like domain AU28_RS19545 IPR003369 Sec-independent protein translocase protein TatA/B/E AU28_RS19545 IPR006312 Sec-independent protein translocase protein TatA/E AU28_RS19550 IPR003998 Twin-arginine translocation protein TatB-like AU28_RS19550 IPR018448 Twin-arginine translocation protein TatB AU28_RS19555 IPR002033 Sec-independent periplasmic protein translocase TatC AU28_RS19555 IPR019820 Sec-independent periplasmic protein translocase, conserved site AU28_RS19560 IPR001130 TatD family AU28_RS19560 IPR018228 Deoxyribonuclease, TatD-related, conserved site AU28_RS19560 IPR024918 Tat-linked quality control protein TatD AU28_RS19560 IPR032466 AU28_RS19560 AU28_RS19565 IPR006645 NusG, N-terminal AU28_RS19565 IPR010215 Transcription antitermination protein RfaH AU28_RS19570 IPR002830 UbiD decarboxylyase family AU28_RS19570 IPR012349 FMN-binding split barrel AU28_RS19570 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AU28_RS19575 IPR001221 Phenol hydroxylase reductase AU28_RS19575 IPR001433 Oxidoreductase FAD/NAD(P)-binding AU28_RS19575 IPR008333 Oxidoreductase, FAD-binding domain AU28_RS19575 IPR017938 Riboflavin synthase-like beta-barrel AU28_RS19580 IPR010262 Arylsulfotransferase AU28_RS19585 IPR002155 Thiolase AU28_RS19585 IPR012805 Acetyl-CoA C-acyltransferase FadA AU28_RS19585 IPR016039 Thiolase-like AU28_RS19585 IPR020610 Thiolase, active site AU28_RS19585 IPR020613 Thiolase, conserved site AU28_RS19585 IPR020615 Thiolase, acyl-enzyme intermediate active site AU28_RS19585 IPR020616 Thiolase, N-terminal AU28_RS19585 IPR020617 Thiolase, C-terminal AU28_RS19590 IPR001753 Crotonase superfamily AU28_RS19590 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AU28_RS19590 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AU28_RS19590 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AU28_RS19590 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS19590 IPR012799 Fatty oxidation complex, alpha subunit FadB AU28_RS19590 IPR013328 Dehydrogenase, multihelical AU28_RS19590 IPR016040 NAD(P)-binding domain AU28_RS19590 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AU28_RS19590 IPR029045 ClpP/crotonase-like domain AU28_RS19595 IPR000994 Peptidase M24, structural domain AU28_RS19595 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AU28_RS19595 IPR022846 Xaa-Pro dipeptidase AU28_RS19600 IPR000640 Translation elongation factor EFG, V domain AU28_RS19600 IPR001498 Impact, N-terminal AU28_RS19600 IPR009022 Elongation factor G, III-V domain AU28_RS19600 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AU28_RS19600 IPR015796 Impact family, bacterial/archaeal AU28_RS19600 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS19600 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AU28_RS19600 IPR023582 Impact family AU28_RS19605 IPR003445 Cation transporter AU28_RS19605 IPR004772 Potassium uptake protein TrkH family AU28_RS19610 IPR001226 Flavodoxin, conserved site AU28_RS19610 IPR026816 Flavodoxin domain AU28_RS19610 IPR029039 Flavoprotein-like AU28_RS19640 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain AU28_RS19640 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19645 IPR013482 Molybdenum cofactor guanylyltransferase AU28_RS19645 IPR025877 MobA-like NTP transferase domain AU28_RS19645 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS19650 IPR009383 Protein of unknown function DUF1040 AU28_RS19655 IPR002575 Aminoglycoside phosphotransferase AU28_RS19655 IPR011009 Protein kinase-like domain AU28_RS19655 IPR032882 AU28_RS19655 AU28_RS19660 IPR001853 DSBA-like thioredoxin domain AU28_RS19660 IPR012336 Thioredoxin-like fold AU28_RS19660 IPR017937 Thioredoxin, conserved site AU28_RS19660 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AU28_RS19665 IPR002123 Phospholipid/glycerol acyltransferase AU28_RS19675 IPR001098 DNA-directed DNA polymerase, family A, palm domain AU28_RS19675 IPR002298 DNA polymerase A AU28_RS19675 IPR002421 5'-3' exonuclease, N-terminal AU28_RS19675 IPR002562 3'-5' exonuclease domain AU28_RS19675 IPR008918 Helix-hairpin-helix motif, class 2 AU28_RS19675 IPR012337 Ribonuclease H-like domain AU28_RS19675 IPR018320 DNA polymerase 1 AU28_RS19675 IPR019760 DNA-directed DNA polymerase, family A, conserved site AU28_RS19675 IPR020045 5'-3' exonuclease, C-terminal domain AU28_RS19675 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AU28_RS19675 IPR029060 PIN domain-like AU28_RS19680 IPR006073 GTP binding domain AU28_RS19680 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC AU28_RS19680 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19690 IPR007336 Der GTPase activator AU28_RS19695 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN AU28_RS19695 IPR006638 Elongator protein 3/MiaB/NifB AU28_RS19695 IPR007197 Radical SAM AU28_RS19695 IPR010723 HemN, C-terminal domain AU28_RS19695 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS19695 IPR023404 Radical SAM, alpha/beta horseshoe AU28_RS19700 IPR001789 Signal transduction response regulator, receiver domain AU28_RS19700 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS19700 IPR002197 DNA binding HTH domain, Fis-type AU28_RS19700 IPR003593 AAA+ ATPase domain AU28_RS19700 IPR009057 Homeodomain-like AU28_RS19700 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) AU28_RS19700 IPR011006 CheY-like superfamily AU28_RS19700 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AU28_RS19700 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS19700 IPR025944 Sigma-54 interaction domain, conserved site AU28_RS19700 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19705 IPR000014 PAS domain AU28_RS19705 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS19705 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS19705 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS19705 IPR013767 PAS fold AU28_RS19710 IPR001637 Glutamine synthetase class-I, adenylation site AU28_RS19710 IPR004809 Glutamine synthetase type I AU28_RS19710 IPR008146 Glutamine synthetase, catalytic domain AU28_RS19710 IPR008147 Glutamine synthetase, beta-Grasp AU28_RS19710 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AU28_RS19710 IPR027302 Glutamine synthetase, N-terminal conserved site AU28_RS19710 IPR027303 Glutamine synthetase, glycine-rich site AU28_RS19715 IPR000640 Translation elongation factor EFG, V domain AU28_RS19715 IPR000795 Elongation factor, GTP-binding domain AU28_RS19715 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AU28_RS19715 IPR005225 Small GTP-binding protein domain AU28_RS19715 IPR006298 GTP-binding protein TypA AU28_RS19715 IPR009000 Translation protein, beta-barrel domain AU28_RS19715 IPR009022 Elongation factor G, III-V domain AU28_RS19715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS19715 IPR031157 AU28_RS19715 AU28_RS19720 IPR000150 Cof protein AU28_RS19720 IPR006379 HAD-superfamily hydrolase, subfamily IIB AU28_RS19720 IPR023214 HAD-like domain AU28_RS19725 IPR013785 Aldolase-type TIM barrel AU28_RS19730 IPR006638 Elongator protein 3/MiaB/NifB AU28_RS19730 IPR007197 Radical SAM AU28_RS19730 IPR010723 HemN, C-terminal domain AU28_RS19730 IPR023404 Radical SAM, alpha/beta horseshoe AU28_RS19735 IPR000917 Sulfatase AU28_RS19735 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS19735 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS19740 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS19745 IPR032675 AU28_RS19745 AU28_RS19750 IPR009331 Oligogalacturonate-specific porin AU28_RS19760 IPR001927 Sodium:galactoside symporter AU28_RS19760 IPR018043 Sodium:galactoside symporter, conserved site AU28_RS19760 IPR020846 Major facilitator superfamily domain AU28_RS19765 IPR000322 Glycoside hydrolase, family 31 AU28_RS19765 IPR011013 Galactose mutarotase-like domain AU28_RS19765 IPR017853 Glycoside hydrolase, superfamily AU28_RS19770 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase AU28_RS19770 IPR011013 Galactose mutarotase-like domain AU28_RS19770 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup AU28_RS19775 IPR008928 Six-hairpin glycosidase-like AU28_RS19775 IPR012341 Six-hairpin glycosidase AU28_RS19775 IPR030875 AU28_RS19775 AU28_RS19780 IPR002915 DeoC/FbaB/ lacD aldolase AU28_RS19780 IPR013785 Aldolase-type TIM barrel AU28_RS19780 IPR017291 Aldolase, YihT AU28_RS19785 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AU28_RS19785 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AU28_RS19785 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AU28_RS19785 IPR013328 Dehydrogenase, multihelical AU28_RS19785 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type AU28_RS19785 IPR016040 NAD(P)-binding domain AU28_RS19785 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AU28_RS19785 IPR030876 AU28_RS19785 AU28_RS19790 IPR002139 Ribokinase AU28_RS19790 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS19790 IPR011611 Carbohydrate kinase PfkB AU28_RS19790 IPR029056 Ribokinase-like AU28_RS19790 IPR030877 AU28_RS19790 AU28_RS19795 IPR001034 HTH DeoR N-terminal domain AU28_RS19795 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS19795 IPR014036 DeoR C-terminal sensor domain AU28_RS19795 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS19800 IPR006439 HAD hydrolase, subfamily IA AU28_RS19800 IPR023198 Phosphoglycolate phosphatase, domain 2 AU28_RS19800 IPR023214 HAD-like domain AU28_RS19805 IPR017039 Virulence factor BrkB AU28_RS19805 IPR023679 Uncharacterised protein family UPF0761, bacterial AU28_RS19810 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase AU28_RS19810 IPR023509 D-Tyr tRNAtyr deacylase-like domain AU28_RS19815 IPR000182 GNAT domain AU28_RS19815 IPR012660 Thioesterase, putative AU28_RS19815 IPR016181 Acyl-CoA N-acyltransferase AU28_RS19815 IPR029069 HotDog domain AU28_RS19820 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS19820 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS19825 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative AU28_RS19830 IPR013094 Alpha/beta hydrolase fold-3 AU28_RS19830 IPR029058 Alpha/Beta hydrolase fold AU28_RS19830 IPR033140 AU28_RS19830 AU28_RS19835 IPR009387 Toxin HigB AU28_RS19840 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS19840 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS19845 IPR006452 Formate dehydrogenase accessory protein AU28_RS19845 IPR024064 FdhE-like AU28_RS19850 IPR006471 Formate dehydrogenase, gamma subunit AU28_RS19850 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AU28_RS19850 IPR016174 Di-haem cytochrome, transmembrane AU28_RS19855 IPR006470 Formate dehydrogenase, beta subunit AU28_RS19855 IPR014603 Formate dehydrogenase, iron-sulphur subunit AU28_RS19855 IPR015246 Formate dehydrogenase, transmembrane AU28_RS19855 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS19855 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS19860 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic AU28_RS19860 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS19860 IPR006656 Molybdopterin oxidoreductase AU28_RS19860 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS19860 IPR009010 Aspartate decarboxylase-like domain AU28_RS19865 IPR006656 Molybdopterin oxidoreductase AU28_RS19865 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS19865 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AU28_RS19870 IPR003786 Protein FdhD AU28_RS19870 IPR016193 Cytidine deaminase-like AU28_RS19875 IPR024291 Protein of unknown function DUF3829 AU28_RS19880 IPR024291 Protein of unknown function DUF3829 AU28_RS19885 IPR024291 Protein of unknown function DUF3829 AU28_RS19890 IPR008407 Branched-chain amino acid transport, AzlD AU28_RS19895 IPR011606 Branched-chain amino acid transport, permease AU28_RS19900 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS19900 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS19900 IPR011051 RmlC-like cupin domain AU28_RS19900 IPR014710 RmlC-like jelly roll fold AU28_RS19905 IPR008000 Rhamnose mutarotase AU28_RS19905 IPR011008 Dimeric alpha-beta barrel AU28_RS19905 IPR013448 L-rhamnose 1-epimerase AU28_RS19910 IPR001670 Alcohol dehydrogenase, iron-type AU28_RS19910 IPR013460 Lactaldehyde reductase AU28_RS19910 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AU28_RS19915 IPR001303 Class II aldolase/adducin N-terminal AU28_RS19915 IPR013447 Rhamnulose-1-phosphate aldolase AU28_RS19920 IPR009308 Rhamnose isomerase AU28_RS19920 IPR013022 Xylose isomerase-like, TIM barrel domain AU28_RS19925 IPR013449 Rhamnulokinase AU28_RS19925 IPR018484 Carbohydrate kinase, FGGY, N-terminal AU28_RS19925 IPR018485 Carbohydrate kinase, FGGY, C-terminal AU28_RS19930 IPR003313 AraC-type arabinose-binding/dimerisation domain AU28_RS19930 IPR009057 Homeodomain-like AU28_RS19930 IPR018060 DNA binding HTH domain, AraC-type AU28_RS19930 IPR018062 HTH domain AraC-type, conserved site AU28_RS19930 IPR020449 Transcription regulator HTH, AraC- type AU28_RS19930 IPR023609 Transcription regulator HTH, RhaS AU28_RS19935 IPR003313 AraC-type arabinose-binding/dimerisation domain AU28_RS19935 IPR009057 Homeodomain-like AU28_RS19935 IPR011051 RmlC-like cupin domain AU28_RS19935 IPR018060 DNA binding HTH domain, AraC-type AU28_RS19935 IPR018062 HTH domain AraC-type, conserved site AU28_RS19935 IPR020449 Transcription regulator HTH, AraC- type AU28_RS19935 IPR023699 Transcription activator HTH, RhaR AU28_RS19940 IPR004673 L-rhamnose-proton symport, RhaT AU28_RS19950 IPR009331 Oligogalacturonate-specific porin AU28_RS19955 IPR004681 TRAP transporter permease protein AU28_RS19955 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AU28_RS19960 IPR018389 Bacterial extracellular solute-binding protein, family 7 AU28_RS19965 IPR001189 Manganese/iron superoxide dismutase AU28_RS19965 IPR019831 Manganese/iron superoxide dismutase, N-terminal AU28_RS19965 IPR019832 Manganese/iron superoxide dismutase, C-terminal AU28_RS19965 IPR019833 Manganese/iron superoxide dismutase, binding site AU28_RS19970 IPR005163 3-alpha domain AU28_RS19970 IPR005302 Molybdenum cofactor sulfurase, C-terminal AU28_RS19970 IPR011037 Pyruvate kinase-like, insert domain AU28_RS19970 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like AU28_RS19975 IPR009959 Polyketide cyclase SnoaL-like domain AU28_RS19975 IPR032710 AU28_RS19975 AU28_RS19985 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS19985 IPR003660 HAMP linker domain AU28_RS19985 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS19985 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS19985 IPR032404 AU28_RS19985 AU28_RS19990 IPR001789 Signal transduction response regulator, receiver domain AU28_RS19990 IPR001867 Signal transduction response regulator, C-terminal AU28_RS19990 IPR011006 CheY-like superfamily AU28_RS19990 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS19995 IPR012899 LTXXQ motif family protein AU28_RS20000 IPR002524 Cation efflux protein AU28_RS20000 IPR023783 Cation efflux pump FieF AU28_RS20000 IPR027469 Cation efflux protein transmembrane domain AU28_RS20000 IPR027470 Cation efflux protein cytoplasmic domain AU28_RS20005 IPR000023 Phosphofructokinase domain AU28_RS20005 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type AU28_RS20005 IPR012828 6-phosphofructokinase AU28_RS20005 IPR015912 Phosphofructokinase, conserved site AU28_RS20005 IPR022953 Phosphofructokinase AU28_RS20010 IPR000957 Sulphate/thiosulphate-binding, conserved site AU28_RS20010 IPR005669 Thiosulphate/Sulfate-binding protein AU28_RS20015 IPR003763 CDP-diacylglycerol pyrophosphatase AU28_RS20015 IPR011146 HIT-like domain AU28_RS20015 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial AU28_RS20020 IPR001927 Sodium:galactoside symporter AU28_RS20020 IPR020846 Major facilitator superfamily domain AU28_RS20025 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AU28_RS20025 IPR011611 Carbohydrate kinase PfkB AU28_RS20025 IPR029056 Ribokinase-like AU28_RS20030 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AU28_RS20030 IPR005502 ADP-ribosylation/Crystallin J1 AU28_RS20035 IPR000524 Transcription regulator HTH, GntR AU28_RS20035 IPR011663 UbiC transcription regulator-associated AU28_RS20035 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS20035 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AU28_RS20045 IPR011051 RmlC-like cupin domain AU28_RS20045 IPR013096 Cupin 2, conserved barrel AU28_RS20045 IPR014710 RmlC-like jelly roll fold AU28_RS20050 IPR000577 AU28_RS20050 AU28_RS20050 IPR018484 Carbohydrate kinase, FGGY, N-terminal AU28_RS20050 IPR018485 Carbohydrate kinase, FGGY, C-terminal AU28_RS20055 IPR007324 Sugar-binding domain, putative AU28_RS20055 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS20060 IPR003439 ABC transporter-like AU28_RS20060 IPR003593 AAA+ ATPase domain AU28_RS20060 IPR017871 ABC transporter, conserved site AU28_RS20060 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS20060 IPR030281 AU28_RS20060 AU28_RS20065 IPR001851 ABC transporter, permease AU28_RS20070 IPR001851 ABC transporter, permease AU28_RS20075 IPR025997 Periplasmic binding protein domain AU28_RS20075 IPR028082 Periplasmic binding protein-like I AU28_RS20075 IPR030159 AU28_RS20075 AU28_RS20080 IPR002915 DeoC/FbaB/ lacD aldolase AU28_RS20080 IPR013785 Aldolase-type TIM barrel AU28_RS20085 IPR007138 Antibiotic biosynthesis monooxygenase-like domain AU28_RS20085 IPR011008 Dimeric alpha-beta barrel AU28_RS20090 IPR000056 Ribulose-phosphate 3-epimerase-like AU28_RS20090 IPR011060 Ribulose-phosphate binding barrel AU28_RS20090 IPR013785 Aldolase-type TIM barrel AU28_RS20095 IPR000652 Triosephosphate isomerase AU28_RS20095 IPR013785 Aldolase-type TIM barrel AU28_RS20095 IPR020861 Triosephosphate isomerase, active site AU28_RS20095 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic AU28_RS20100 IPR009918 Protein of unknown function DUF1454 AU28_RS20105 IPR008523 Lactobacillus phage LBR48, DUF805 AU28_RS20110 IPR001433 Oxidoreductase FAD/NAD(P)-binding AU28_RS20110 IPR008333 Oxidoreductase, FAD-binding domain AU28_RS20110 IPR017938 Riboflavin synthase-like beta-barrel AU28_RS20115 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase AU28_RS20120 IPR000577 AU28_RS20120 AU28_RS20120 IPR005999 Glycerol kinase AU28_RS20120 IPR018483 Carbohydrate kinase, FGGY, conserved site AU28_RS20120 IPR018484 Carbohydrate kinase, FGGY, N-terminal AU28_RS20120 IPR018485 Carbohydrate kinase, FGGY, C-terminal AU28_RS20125 IPR000425 Major intrinsic protein AU28_RS20125 IPR022357 Major intrinsic protein, conserved site AU28_RS20125 IPR023271 Aquaporin-like AU28_RS20130 IPR009252 Cell division protein ZapB AU28_RS20135 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase AU28_RS20135 IPR010203 Regulator of ribonuclease activity A AU28_RS20135 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria AU28_RS20140 IPR000537 UbiA prenyltransferase family AU28_RS20140 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase AU28_RS20140 IPR026046 UbiA prenyltransferase domain containing protein 1 AU28_RS20145 IPR003593 AAA+ ATPase domain AU28_RS20145 IPR003959 ATPase, AAA-type, core AU28_RS20145 IPR004491 Heat shock protein HslU AU28_RS20145 IPR019489 Clp ATPase, C-terminal AU28_RS20145 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS20150 IPR001353 Proteasome, subunit alpha/beta AU28_RS20150 IPR022281 ATP-dependent protease, HslV subunit AU28_RS20150 IPR029055 Nucleophile aminohydrolases, N-terminal AU28_RS20155 IPR007730 Sporulation-related domain AU28_RS20155 IPR011930 Cell division protein FtsN AU28_RS20160 IPR000843 Transcription regulator HTH, LacI AU28_RS20160 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS20160 IPR028082 Periplasmic binding protein-like I AU28_RS20165 IPR001650 Helicase, C-terminal AU28_RS20165 IPR005259 Primosomal protein n AU28_RS20165 IPR011545 DEAD/DEAH box helicase domain AU28_RS20165 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS20165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS20170 IPR002150 Ribosomal protein L31 AU28_RS20170 IPR027491 Ribosomal protein L31 type A AU28_RS20175 IPR011727 Conserved hypothetical protein CHP02117 AU28_RS20180 IPR010262 Arylsulfotransferase AU28_RS20185 IPR002084 Methionine repressor MetJ AU28_RS20185 IPR010985 Ribbon-helix-helix AU28_RS20185 IPR023453 Methionine repressor MetJ domain AU28_RS20190 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AU28_RS20190 IPR011821 O-succinylhomoserine (thiol)-lyase AU28_RS20190 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS20190 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS20190 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS20195 IPR001048 Aspartate/glutamate/uridylate kinase AU28_RS20195 IPR001341 Aspartate kinase domain AU28_RS20195 IPR001342 Homoserine dehydrogenase, catalytic AU28_RS20195 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AU28_RS20195 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I AU28_RS20195 IPR016040 NAD(P)-binding domain AU28_RS20195 IPR018042 Aspartate kinase, conserved site AU28_RS20195 IPR019811 Homoserine dehydrogenase, conserved site AU28_RS20200 IPR006685 Mechanosensitive ion channel MscS AU28_RS20200 IPR006686 Mechanosensitive ion channel MscS, conserved site AU28_RS20200 IPR008910 Conserved TM helix AU28_RS20200 IPR010920 Like-Sm (LSM) domain AU28_RS20200 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AU28_RS20200 IPR011066 Mechanosensitive ion channel MscS, C-terminal AU28_RS20205 IPR020846 Major facilitator superfamily domain AU28_RS20215 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AU28_RS20215 IPR006146 5'-Nucleotidase, conserved site AU28_RS20215 IPR006179 5'-Nucleotidase/apyrase AU28_RS20215 IPR008334 5'-Nucleotidase, C-terminal AU28_RS20215 IPR029052 Metallo-dependent phosphatase-like AU28_RS20220 IPR001085 Serine hydroxymethyltransferase AU28_RS20220 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS20220 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS20220 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS20220 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AU28_RS20225 IPR000821 Alanine racemase AU28_RS20225 IPR001608 Alanine racemase, N-terminal AU28_RS20225 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AU28_RS20225 IPR011079 Alanine racemase, C-terminal AU28_RS20225 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site AU28_RS20225 IPR029066 PLP-binding barrel AU28_RS20230 IPR000524 Transcription regulator HTH, GntR AU28_RS20230 IPR004839 Aminotransferase, class I/classII AU28_RS20230 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS20230 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS20230 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS20240 IPR003171 Methylenetetrahydrofolate reductase AU28_RS20240 IPR004620 5,10-methylenetetrahydrofolate reductase AU28_RS20240 IPR029041 FAD-linked oxidoreductase-like AU28_RS20245 IPR000763 Catalase-peroxidase haem AU28_RS20245 IPR002016 Haem peroxidase, plant/fungal/bacterial AU28_RS20245 IPR010255 Haem peroxidase AU28_RS20245 IPR019793 Peroxidases heam-ligand binding site AU28_RS20245 IPR019794 Peroxidase, active site AU28_RS20250 IPR009706 Protein of unknown function DUF1287 AU28_RS20255 IPR001670 Alcohol dehydrogenase, iron-type AU28_RS20255 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AU28_RS20260 IPR001585 Transaldolase AU28_RS20260 IPR004731 Transaldolase 3A/3B AU28_RS20260 IPR013785 Aldolase-type TIM barrel AU28_RS20260 IPR018225 Transaldolase, active site AU28_RS20260 IPR023001 Fructose-6-phosphate aldolase AU28_RS20265 IPR000032 Phosphocarrier HPr protein-like AU28_RS20265 IPR000121 PEP-utilising enzyme, C-terminal AU28_RS20265 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AU28_RS20265 IPR002178 PTS EIIA type-2 domain AU28_RS20265 IPR006318 Phosphoenolpyruvate-utilising enzyme AU28_RS20265 IPR008279 PEP-utilising enzyme, mobile domain AU28_RS20265 IPR008731 Phosphotransferase system, enzyme I N-terminal AU28_RS20265 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS20265 IPR016152 Phosphotransferase/anion transporter AU28_RS20265 IPR018274 PEP-utilising enzyme, active site AU28_RS20265 IPR023151 PEP-utilising enzyme, conserved site AU28_RS20270 IPR006327 Phosphotransferase system, fructose IIC component AU28_RS20275 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AU28_RS20275 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS20280 IPR001150 Glycine radical domain AU28_RS20280 IPR004184 Pyruvate formate lyase domain AU28_RS20280 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family AU28_RS20280 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AU28_RS20285 IPR001989 Radical-activating enzyme, conserved site AU28_RS20285 IPR007197 Radical SAM AU28_RS20285 IPR012839 Glycyl radical enzyme activase AU28_RS20290 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AU28_RS20290 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS20295 IPR009057 Homeodomain-like AU28_RS20295 IPR018060 DNA binding HTH domain, AraC-type AU28_RS20295 IPR018062 HTH domain AraC-type, conserved site AU28_RS20295 IPR020449 Transcription regulator HTH, AraC- type AU28_RS20300 IPR000917 Sulfatase AU28_RS20300 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS20300 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS20305 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS20305 IPR018129 Phosphoenolpyruvate carboxylase, active site AU28_RS20305 IPR021135 Phosphoenolpyruvate carboxylase AU28_RS20305 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type AU28_RS20305 IPR033129 AU28_RS20305 AU28_RS20310 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AU28_RS20310 IPR002933 Peptidase M20 AU28_RS20310 IPR010169 Acetylornithine deacetylase (ArgE) AU28_RS20310 IPR011650 Peptidase M20, dimerisation domain AU28_RS20315 IPR000534 Semialdehyde dehydrogenase, NAD-binding AU28_RS20315 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 AU28_RS20315 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AU28_RS20315 IPR016040 NAD(P)-binding domain AU28_RS20315 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site AU28_RS20320 IPR001048 Aspartate/glutamate/uridylate kinase AU28_RS20320 IPR004662 Acetylglutamate kinase AU28_RS20325 IPR000362 Fumarate lyase family AU28_RS20325 IPR008948 L-Aspartase-like AU28_RS20325 IPR009049 Argininosuccinate lyase AU28_RS20325 IPR020557 Fumarate lyase, conserved site AU28_RS20325 IPR022761 Fumarate lyase, N-terminal AU28_RS20325 IPR024083 Fumarase/histidase, N-terminal AU28_RS20325 IPR029419 Argininosuccinate lyase, C-terminal AU28_RS20330 IPR000847 Transcription regulator HTH, LysR AU28_RS20330 IPR005119 LysR, substrate-binding AU28_RS20330 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS20335 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AU28_RS20335 IPR016156 FAD/NAD-linked reductase, dimerisation domain AU28_RS20335 IPR022962 Soluble pyridine nucleotide transhydrogenase AU28_RS20335 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS20340 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS20340 IPR009057 Homeodomain-like AU28_RS20340 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS20340 IPR023764 Transcriptional repressor HTH, FabR AU28_RS20345 IPR009867 Protein of unknown function DUF1422 AU28_RS20350 IPR010280 (Uracil-5)-methyltransferase family AU28_RS20350 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA AU28_RS20350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS20350 IPR030390 AU28_RS20350 AU28_RS20350 IPR030391 AU28_RS20350 AU28_RS20355 IPR000531 TonB-dependent receptor, beta-barrel AU28_RS20355 IPR010101 TonB-dependent vitamin B12 transporter BtuB AU28_RS20355 IPR010916 TonB box, conserved site AU28_RS20355 IPR010917 TonB-dependent receptor, conserved site AU28_RS20355 IPR012910 TonB-dependent receptor, plug AU28_RS20360 IPR001920 Asp/Glu racemase AU28_RS20360 IPR004391 Glutamate racemase AU28_RS20360 IPR015942 Asp/Glu/hydantoin racemase AU28_RS20360 IPR018187 Asp/Glu racemase, active site AU28_RS20360 IPR033134 AU28_RS20360 AU28_RS20390 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase AU28_RS20390 IPR006094 FAD linked oxidase, N-terminal AU28_RS20390 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal AU28_RS20390 IPR016166 FAD-binding, type 2 AU28_RS20390 IPR016167 FAD-binding, type 2, subdomain 1 AU28_RS20390 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AU28_RS20395 IPR003142 Biotin protein ligase, C-terminal AU28_RS20395 IPR004143 Biotin/lipoate A/B protein ligase AU28_RS20395 IPR004408 Biotin--acetyl-CoA-carboxylase ligase AU28_RS20395 IPR004409 Biotin operon repressor, helix-turn-helix domain AU28_RS20395 IPR008988 Transcriptional repressor, C-terminal AU28_RS20395 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS20395 IPR013196 Helix-turn-helix, type 11 AU28_RS20395 IPR030855 AU28_RS20395 AU28_RS20400 IPR004566 Bacterial pantothenate kinase AU28_RS20400 IPR006083 Phosphoribulokinase/uridine kinase AU28_RS20400 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS20430 IPR000795 Elongation factor, GTP-binding domain AU28_RS20430 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AU28_RS20430 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AU28_RS20430 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AU28_RS20430 IPR005225 Small GTP-binding protein domain AU28_RS20430 IPR009000 Translation protein, beta-barrel domain AU28_RS20430 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AU28_RS20430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS20430 IPR031157 AU28_RS20430 AU28_RS20435 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit AU28_RS20435 IPR005807 SecE subunit of protein translocation complex AU28_RS20435 IPR022943 Preprotein translocase subunit SecE AU28_RS20440 IPR001062 Transcription antitermination protein, NusG AU28_RS20440 IPR005824 KOW AU28_RS20440 IPR006645 NusG, N-terminal AU28_RS20440 IPR008991 Translation protein SH3-like domain AU28_RS20440 IPR014722 Ribosomal protein L2 domain 2 AU28_RS20440 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AU28_RS20445 IPR000911 Ribosomal protein L11/L12 AU28_RS20445 IPR006519 Ribosomal protein L11, bacterial-type AU28_RS20445 IPR020783 Ribosomal protein L11, C-terminal AU28_RS20445 IPR020784 Ribosomal protein L11, N-terminal AU28_RS20445 IPR020785 Ribosomal protein L11, conserved site AU28_RS20450 IPR002143 Ribosomal protein L1 AU28_RS20450 IPR005878 Ribosomal protein L1, bacterial-type AU28_RS20450 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich AU28_RS20450 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AU28_RS20450 IPR023673 Ribosomal protein L1, conserved site AU28_RS20450 IPR023674 Ribosomal protein L1-like AU28_RS20450 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AU28_RS20455 IPR001790 Ribosomal protein L10/acidic P0 AU28_RS20455 IPR002363 Ribosomal protein L10, eubacterial, conserved site AU28_RS20455 IPR022973 Ribosomal protein L10 AU28_RS20460 IPR000206 Ribosomal protein L7/L12 AU28_RS20460 IPR008932 Ribosomal protein L7/L12, oligomerisation AU28_RS20460 IPR013823 Ribosomal protein L7/L12, C-terminal AU28_RS20460 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AU28_RS20465 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 AU28_RS20465 IPR007121 RNA polymerase, beta subunit, conserved site AU28_RS20465 IPR007641 RNA polymerase Rpb2, domain 7 AU28_RS20465 IPR007642 RNA polymerase Rpb2, domain 2 AU28_RS20465 IPR007644 RNA polymerase, beta subunit, protrusion AU28_RS20465 IPR007645 RNA polymerase Rpb2, domain 3 AU28_RS20465 IPR010243 DNA-directed RNA polymerase, beta subunit AU28_RS20465 IPR014724 RNA polymerase Rpb2, OB-fold AU28_RS20465 IPR015712 DNA-directed RNA polymerase, subunit 2 AU28_RS20465 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain AU28_RS20470 IPR000722 RNA polymerase, alpha subunit AU28_RS20470 IPR006592 RNA polymerase, N-terminal AU28_RS20470 IPR007066 RNA polymerase Rpb1, domain 3 AU28_RS20470 IPR007080 RNA polymerase Rpb1, domain 1 AU28_RS20470 IPR007081 RNA polymerase Rpb1, domain 5 AU28_RS20470 IPR007083 RNA polymerase Rpb1, domain 4 AU28_RS20470 IPR012754 DNA-directed RNA polymerase, subunit beta-prime AU28_RS20495 IPR007197 Radical SAM AU28_RS20495 IPR010722 Biotin and thiamin synthesis-associated domain AU28_RS20495 IPR012726 Thiazole biosynthesis ThiH AU28_RS20495 IPR013785 Aldolase-type TIM barrel AU28_RS20500 IPR008867 Thiazole biosynthesis AU28_RS20500 IPR013785 Aldolase-type TIM barrel AU28_RS20505 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 AU28_RS20505 IPR010035 ThiS, thiamine-biosynthesis AU28_RS20505 IPR012675 Beta-grasp domain AU28_RS20505 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AU28_RS20510 IPR000594 UBA/THIF-type NAD/FAD binding fold AU28_RS20510 IPR016040 NAD(P)-binding domain AU28_RS20515 IPR003733 Thiamine phosphate synthase AU28_RS20515 IPR013785 Aldolase-type TIM barrel AU28_RS20515 IPR022998 Thiamin phosphate synthase superfamily AU28_RS20520 IPR002817 Thiamine biosynthesis protein ThiC AU28_RS20520 IPR025747 ThiC-associated domain AU28_RS20525 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AU28_RS20525 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd AU28_RS20530 IPR000086 NUDIX hydrolase domain AU28_RS20530 IPR015376 Zinc ribbon, NADH pyrophosphatase AU28_RS20530 IPR015797 NUDIX hydrolase domain-like AU28_RS20530 IPR020084 NUDIX hydrolase, conserved site AU28_RS20530 IPR022925 NADH pyrophosphatase NudC AU28_RS20535 IPR000257 Uroporphyrinogen decarboxylase (URO-D) AU28_RS20535 IPR006361 Uroporphyrinogen decarboxylase HemE AU28_RS20540 IPR007581 Endonuclease V AU28_RS20545 IPR007338 Protein of unknown function DUF416 AU28_RS20545 IPR023381 YP001051499.1-like domain AU28_RS20550 IPR000119 Histone-like bacterial DNA-binding protein AU28_RS20550 IPR010992 Integration host factor (IHF)-like DNA-binding domain AU28_RS20550 IPR020816 Histone-like DNA-binding protein, conserved site AU28_RS20555 IPR010858 Protein of unknown function DUF1481 AU28_RS20555 IPR016500 Uncharacterised conserved protein UCP006993 AU28_RS20560 IPR020365 Zinc resistance-associated protein, ZraP AU28_RS20560 IPR025961 Heavy-metal resistance protein AU28_RS20565 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS20565 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS20565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS20565 IPR029151 Periplasmic sensor domain-like AU28_RS20570 IPR001789 Signal transduction response regulator, receiver domain AU28_RS20570 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS20570 IPR002197 DNA binding HTH domain, Fis-type AU28_RS20570 IPR003593 AAA+ ATPase domain AU28_RS20570 IPR009057 Homeodomain-like AU28_RS20570 IPR011006 CheY-like superfamily AU28_RS20570 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AU28_RS20570 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS20570 IPR025944 Sigma-54 interaction domain, conserved site AU28_RS20570 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS20575 IPR000115 Phosphoribosylglycinamide synthetase AU28_RS20575 IPR011054 Rudiment single hybrid motif AU28_RS20575 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS20575 IPR013816 ATP-grasp fold, subdomain 2 AU28_RS20575 IPR016185 Pre-ATP-grasp domain AU28_RS20575 IPR020559 Phosphoribosylglycinamide synthetase, conserved site AU28_RS20575 IPR020560 Phosphoribosylglycinamide synthetase, C-domain AU28_RS20575 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AU28_RS20575 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal AU28_RS20580 IPR002695 AICARFT/IMPCHase bienzyme AU28_RS20580 IPR011607 Methylglyoxal synthase-like domain AU28_RS20580 IPR016193 Cytidine deaminase-like AU28_RS20580 IPR024051 AICAR transformylase domain AU28_RS20605 IPR000182 GNAT domain AU28_RS20605 IPR016181 Acyl-CoA N-acyltransferase AU28_RS20610 IPR005697 Homoserine O-succinyltransferase AU28_RS20610 IPR029062 Class I glutamine amidotransferase-like AU28_RS20615 IPR001465 Malate synthase AU28_RS20615 IPR006252 Malate synthase A AU28_RS20615 IPR011076 Malate synthase-like AU28_RS20615 IPR019830 Malate synthase, conserved site AU28_RS20620 IPR006254 Isocitrate lyase AU28_RS20620 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AU28_RS20620 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AU28_RS20625 IPR010452 Isocitrate dehydrogenase kinasephosphatase AU28_RS20630 IPR007374 ASCH domain AU28_RS20630 IPR009326 Protein of unknown function DUF984 AU28_RS20630 IPR015947 PUA-like domain AU28_RS20635 IPR005471 Transcription regulator IclR, N-terminal AU28_RS20635 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS20635 IPR014757 Transcription regulator IclR, C-terminal AU28_RS20635 IPR029016 GAF domain-like AU28_RS20640 IPR000489 Pterin-binding AU28_RS20640 IPR003726 Homocysteine S-methyltransferase AU28_RS20640 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AU28_RS20640 IPR004223 Vitamin B12-dependent methionine synthase, activation domain AU28_RS20640 IPR006158 Cobalamin (vitamin B12)-binding domain AU28_RS20640 IPR011005 Dihydropteroate synthase-like AU28_RS20640 IPR011822 Cobalamin-dependent methionine synthase AU28_RS20645 IPR003841 Sodium-dependent phosphate transport protein AU28_RS20645 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein AU28_RS20650 IPR005320 Peptidase S51 AU28_RS20650 IPR029062 Class I glutamine amidotransferase-like AU28_RS20660 IPR018636 Protein of unknown function DUF2058 AU28_RS20665 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AU28_RS20665 IPR002942 RNA-binding S4 domain AU28_RS20665 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AU28_RS20665 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AU28_RS20665 IPR020103 Pseudouridine synthase, catalytic domain AU28_RS20670 IPR020317 Uncharacterised protein family YjbD AU28_RS20675 IPR001034 HTH DeoR N-terminal domain AU28_RS20675 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS20675 IPR014036 DeoR C-terminal sensor domain AU28_RS20675 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS20680 IPR000150 Cof protein AU28_RS20680 IPR006379 HAD-superfamily hydrolase, subfamily IIB AU28_RS20680 IPR023214 HAD-like domain AU28_RS20685 IPR011060 Ribulose-phosphate binding barrel AU28_RS20685 IPR013785 Aldolase-type TIM barrel AU28_RS20695 IPR029044 Nucleotide-diphospho-sugar transferases AU28_RS20700 IPR001451 Bacterial transferase hexapeptide repeat AU28_RS20700 IPR011004 Trimeric LpxA-like AU28_RS20700 IPR018357 Hexapeptide transferase, conserved site AU28_RS20710 IPR009057 Homeodomain-like AU28_RS20710 IPR014875 Mor transcription activator AU28_RS20715 IPR001048 Aspartate/glutamate/uridylate kinase AU28_RS20715 IPR001341 Aspartate kinase domain AU28_RS20715 IPR002912 ACT domain AU28_RS20715 IPR005260 Aspartate kinase, monofunctional class AU28_RS20715 IPR018042 Aspartate kinase, conserved site AU28_RS20720 IPR001672 Phosphoglucose isomerase (PGI) AU28_RS20720 IPR018189 Phosphoglucose isomerase, conserved site AU28_RS20720 IPR023096 Phosphoglucose isomerase, C-terminal AU28_RS20725 IPR025858 Exopolysaccharide production protein YjbE AU28_RS20730 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB AU28_RS20730 IPR023373 YmcC-like domain AU28_RS20735 IPR010425 Domain of unknown function DUF1017 AU28_RS20740 IPR010344 Protein of unknown function DUF940 AU28_RS20745 IPR009315 Phosphate-starvation-induced PsiE AU28_RS20745 IPR020948 Phosphate-starvation-induced PsiE-like AU28_RS20750 IPR000515 MetI-like domain AU28_RS20755 IPR000515 MetI-like domain AU28_RS20755 IPR029345 Maltose transport system permease protein MalF, P2 domain AU28_RS20760 IPR006060 Maltose binding protein AU28_RS20760 IPR006061 Bacterial extracellular solute-binding family 1, conserved site AU28_RS20765 IPR003439 ABC transporter-like AU28_RS20765 IPR003593 AAA+ ATPase domain AU28_RS20765 IPR008995 Molybdate/tungstate binding, C-terminal AU28_RS20765 IPR012340 Nucleic acid-binding, OB-fold AU28_RS20765 IPR013611 Transport-associated OB, type 2 AU28_RS20765 IPR017871 ABC transporter, conserved site AU28_RS20765 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS20770 IPR003192 Porin, LamB type AU28_RS20770 IPR023738 Maltoporin AU28_RS20775 IPR010794 Maltose operon periplasmic AU28_RS20780 IPR007440 Chorismate--pyruvate lyase AU28_RS20780 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AU28_RS20785 IPR000537 UbiA prenyltransferase family AU28_RS20785 IPR006370 4-hydroxybenzoate polyprenyl transferase AU28_RS20785 IPR030470 AU28_RS20785 AU28_RS20785 IPR031103 AU28_RS20785 AU28_RS20790 IPR002123 Phospholipid/glycerol acyltransferase AU28_RS20790 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase AU28_RS20790 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB AU28_RS20795 IPR000829 Diacylglycerol kinase, prokaryotic AU28_RS20800 IPR006197 Peptidase S24, LexA-like AU28_RS20800 IPR006199 LexA repressor, DNA-binding domain AU28_RS20800 IPR006200 LexA repressor AU28_RS20800 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS20800 IPR015927 Peptidase S24/S26A/S26B/S26C AU28_RS20800 IPR019759 Peptidase S24/S26A/S26B AU28_RS20800 IPR028360 Peptidase S24/S26, beta-ribbon domain AU28_RS20805 IPR002528 Multi antimicrobial extrusion protein AU28_RS20815 IPR008462 CsbD-like AU28_RS20815 IPR026042 Stress response protein YjbJ AU28_RS20820 IPR002481 Ferric-uptake regulator AU28_RS20820 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS20825 IPR032811 AU28_RS20825 AU28_RS20830 IPR001269 tRNA-dihydrouridine synthase AU28_RS20830 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN AU28_RS20830 IPR013785 Aldolase-type TIM barrel AU28_RS20830 IPR018517 tRNA-dihydrouridine synthase, conserved site AU28_RS20835 IPR014318 Phage shock protein, PspG AU28_RS20840 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS20840 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AU28_RS20840 IPR011032 GroES (chaperonin 10)-like AU28_RS20840 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS20840 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS20840 IPR016040 NAD(P)-binding domain AU28_RS20840 IPR020843 Polyketide synthase, enoylreductase AU28_RS20845 IPR003593 AAA+ ATPase domain AU28_RS20845 IPR007692 DNA helicase, DnaB type AU28_RS20845 IPR007693 DNA helicase, DnaB-like, N-terminal AU28_RS20845 IPR007694 DNA helicase, DnaB-like, C-terminal AU28_RS20845 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AU28_RS20845 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS20850 IPR000821 Alanine racemase AU28_RS20850 IPR001608 Alanine racemase, N-terminal AU28_RS20850 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AU28_RS20850 IPR011079 Alanine racemase, C-terminal AU28_RS20850 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site AU28_RS20850 IPR029066 PLP-binding barrel AU28_RS20855 IPR000796 Aspartate/other aminotransferase AU28_RS20855 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AU28_RS20855 IPR004839 Aminotransferase, class I/classII AU28_RS20855 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS20855 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS20860 IPR005519 Acid phosphatase (Class B) AU28_RS20860 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA AU28_RS20860 IPR023214 HAD-like domain AU28_RS20865 IPR001602 Uncharacterised protein family UPF0047 AU28_RS20870 IPR007351 Uncharacterised protein YjbR AU28_RS20885 IPR003439 ABC transporter-like AU28_RS20885 IPR004602 UvrABC system subunit A AU28_RS20885 IPR013815 ATP-grasp fold, subdomain 1 AU28_RS20885 IPR017871 ABC transporter, conserved site AU28_RS20885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS20895 IPR000424 Primosome PriB/single-strand DNA-binding AU28_RS20895 IPR011344 Single-stranded DNA-binding protein AU28_RS20895 IPR012340 Nucleic acid-binding, OB-fold AU28_RS20905 IPR002898 MotA/TolQ/ExbB proton channel AU28_RS20910 IPR003423 Outer membrane efflux protein AU28_RS20915 IPR003997 RTX secretion protein D, Gram-negative bacteria AU28_RS20915 IPR010129 Type I secretion membrane fusion protein, HlyD AU28_RS20920 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation AU28_RS20920 IPR014756 Immunoglobulin E-set AU28_RS20920 IPR022038 Bacterial Ig-like domain AU28_RS20925 IPR003439 ABC transporter-like AU28_RS20925 IPR003593 AAA+ ATPase domain AU28_RS20925 IPR011527 ABC transporter type 1, transmembrane domain AU28_RS20925 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS20930 IPR016958 Uncharacterised conserved protein UCP030798 AU28_RS20935 IPR001633 EAL domain AU28_RS20935 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AU28_RS20940 IPR009057 Homeodomain-like AU28_RS20940 IPR018060 DNA binding HTH domain, AraC-type AU28_RS20940 IPR018062 HTH domain AraC-type, conserved site AU28_RS20940 IPR020449 Transcription regulator HTH, AraC- type AU28_RS20945 IPR000551 MerR-type HTH domain AU28_RS20945 IPR009061 DNA binding domain, putative AU28_RS20945 IPR010211 Redox-sensitive transcriptional activator SoxR AU28_RS20945 IPR015358 Transcription regulator MerR, DNA binding AU28_RS20950 IPR004045 Glutathione S-transferase, N-terminal AU28_RS20950 IPR004046 Glutathione S-transferase, C-terminal AU28_RS20950 IPR010987 Glutathione S-transferase, C-terminal-like AU28_RS20950 IPR012336 Thioredoxin-like fold AU28_RS20955 IPR006043 Xanthine/uracil/vitamin C permease AU28_RS20960 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria AU28_RS20960 IPR006153 Cation/H+ exchanger AU28_RS20960 IPR018422 Cation/H+ exchanger, CPA1 family AU28_RS20965 IPR000847 Transcription regulator HTH, LysR AU28_RS20965 IPR005119 LysR, substrate-binding AU28_RS20965 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS20970 IPR005538 LrgA/CidA family AU28_RS20975 IPR007300 CidB/LrgB family AU28_RS20980 IPR001734 Sodium/solute symporter AU28_RS20980 IPR014083 Cation/acetate symporter ActP AU28_RS20980 IPR018212 Sodium/solute symporter, conserved site AU28_RS20985 IPR007436 Protein of unknown function DUF485 AU28_RS20990 IPR000873 AMP-dependent synthetase/ligase AU28_RS20990 IPR011904 Acetate-CoA ligase AU28_RS20990 IPR020845 AMP-binding, conserved site AU28_RS20990 IPR025110 AMP-binding enzyme C-terminal domain AU28_RS20990 IPR032387 AU28_RS20990 AU28_RS21000 IPR003321 Cytochrome c552 AU28_RS21000 IPR011031 Multihaem cytochrome AU28_RS21000 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit AU28_RS21000 IPR023155 Cytochrome c-552/4 AU28_RS21005 IPR010177 Doubled CXXCH motif AU28_RS21005 IPR011031 Multihaem cytochrome AU28_RS21005 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit AU28_RS21010 IPR017567 Cytochrome c nitrite reductase, Fe-S protein AU28_RS21010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS21010 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS21015 IPR005614 NrfD family AU28_RS21015 IPR017566 NrfD AU28_RS21020 IPR002541 Cytochrome c assembly protein AU28_RS21020 IPR003567 Cytochrome c-type biogenesis protein AU28_RS21020 IPR003570 Cytochrome c-type biogenesis protein NrfE AU28_RS21020 IPR032523 AU28_RS21020 AU28_RS21025 IPR005616 Cytochrome C biogenesis protein CcmH AU28_RS21025 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF AU28_RS21025 IPR031873 AU28_RS21025 AU28_RS21030 IPR011990 Tetratricopeptide-like helical domain AU28_RS21030 IPR019734 Tetratricopeptide repeat AU28_RS21035 IPR001991 Sodium:dicarboxylate symporter AU28_RS21035 IPR018107 Sodium:dicarboxylate symporter, conserved site AU28_RS21035 IPR033380 AU28_RS21035 AU28_RS21040 IPR006597 Sel1-like AU28_RS21040 IPR011990 Tetratricopeptide-like helical domain AU28_RS21045 IPR006478 Formate dehydrogenase, alpha subunit AU28_RS21045 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS21045 IPR006656 Molybdopterin oxidoreductase AU28_RS21045 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS21045 IPR009010 Aspartate decarboxylase-like domain AU28_RS21050 IPR006656 Molybdopterin oxidoreductase AU28_RS21050 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AU28_RS21050 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AU28_RS21055 IPR007803 Arginine/Asparagine/Proline hydroxylase AU28_RS21055 IPR027443 Isopenicillin N synthase-like AU28_RS21060 IPR000182 GNAT domain AU28_RS21060 IPR016181 Acyl-CoA N-acyltransferase AU28_RS21065 IPR028973 3-demethylubiquinone-9 3-methyltransferase AU28_RS21065 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AU28_RS21070 IPR004624 PhnA protein AU28_RS21070 IPR013987 PhnA protein, N-terminal AU28_RS21070 IPR013988 PhnA protein, C-terminal AU28_RS21075 IPR004736 Citrate-proton symport AU28_RS21075 IPR005828 General substrate transporter AU28_RS21075 IPR005829 Sugar transporter, conserved site AU28_RS21075 IPR015041 Osmosensory transporter coiled coil AU28_RS21075 IPR020846 Major facilitator superfamily domain AU28_RS21085 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS21085 IPR003660 HAMP linker domain AU28_RS21085 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS21085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS21090 IPR001789 Signal transduction response regulator, receiver domain AU28_RS21090 IPR001867 Signal transduction response regulator, C-terminal AU28_RS21090 IPR011006 CheY-like superfamily AU28_RS21090 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS21090 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS21095 IPR000917 Sulfatase AU28_RS21095 IPR012549 Domain of unknown function DUF1705 AU28_RS21095 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS21095 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS21100 IPR002293 Amino acid/polyamine transporter I AU28_RS21105 IPR009057 Homeodomain-like AU28_RS21105 IPR018060 DNA binding HTH domain, AraC-type AU28_RS21105 IPR018062 HTH domain AraC-type, conserved site AU28_RS21105 IPR020449 Transcription regulator HTH, AraC- type AU28_RS21115 IPR000310 Orn/Lys/Arg decarboxylase, major domain AU28_RS21115 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal AU28_RS21115 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal AU28_RS21115 IPR011193 Ornithine/lysine/arginine decarboxylase AU28_RS21115 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS21115 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AU28_RS21115 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS21120 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain AU28_RS21120 IPR009057 Homeodomain-like AU28_RS21120 IPR011051 RmlC-like cupin domain AU28_RS21120 IPR014710 RmlC-like jelly roll fold AU28_RS21120 IPR018060 DNA binding HTH domain, AraC-type AU28_RS21120 IPR018062 HTH domain AraC-type, conserved site AU28_RS21120 IPR020449 Transcription regulator HTH, AraC- type AU28_RS21125 IPR001088 Glycoside hydrolase, family 4 AU28_RS21125 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AU28_RS21125 IPR016040 NAD(P)-binding domain AU28_RS21125 IPR019802 Glycoside hydrolase, family 4, conserved site AU28_RS21125 IPR022616 Glycosyl hydrolase, family 4, C-terminal AU28_RS21130 IPR001927 Sodium:galactoside symporter AU28_RS21130 IPR018043 Sodium:galactoside symporter, conserved site AU28_RS21130 IPR020846 Major facilitator superfamily domain AU28_RS21135 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AU28_RS21135 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AU28_RS21135 IPR011167 Iron-dependent fumarate hydratase AU28_RS21135 IPR020557 Fumarate lyase, conserved site AU28_RS21140 IPR004668 Anaerobic c4-dicarboxylate membrane transporter AU28_RS21150 IPR001789 Signal transduction response regulator, receiver domain AU28_RS21150 IPR009057 Homeodomain-like AU28_RS21150 IPR011006 CheY-like superfamily AU28_RS21150 IPR024187 Signal transduction response regulator, citrate/malate metabolism AU28_RS21155 IPR000014 PAS domain AU28_RS21155 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS21155 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS21155 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS21155 IPR013767 PAS fold AU28_RS21155 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB AU28_RS21155 IPR029151 Periplasmic sensor domain-like AU28_RS21155 IPR033463 AU28_RS21155 AU28_RS21160 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AU28_RS21160 IPR006656 Molybdopterin oxidoreductase AU28_RS21160 IPR006657 Molydopterin dinucleotide-binding domain AU28_RS21160 IPR009010 Aspartate decarboxylase-like domain AU28_RS21160 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE AU28_RS21165 IPR014297 Dimethylsulphoxide reductase, chain B AU28_RS21165 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS21165 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS21170 IPR007059 DMSO reductase anchor subunit (DmsC) AU28_RS21175 IPR020945 DMSO/Nitrate reductase chaperone AU28_RS21175 IPR026269 Tat proofreading chaperone DmsD-type AU28_RS21180 IPR018535 Domain of unknown function DUF1996 AU28_RS21185 IPR009722 SdiA-regulated AU28_RS21185 IPR011042 Six-bladed beta-propeller, TolB-like AU28_RS21195 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS21195 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS21195 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS21200 IPR009057 Homeodomain-like AU28_RS21200 IPR018060 DNA binding HTH domain, AraC-type AU28_RS21200 IPR018062 HTH domain AraC-type, conserved site AU28_RS21200 IPR020449 Transcription regulator HTH, AraC- type AU28_RS21210 IPR010985 Ribbon-helix-helix AU28_RS21210 IPR014795 Vibrio phage ICP1, Orf50 AU28_RS21215 IPR000182 GNAT domain AU28_RS21215 IPR016181 Acyl-CoA N-acyltransferase AU28_RS21220 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AU28_RS21220 IPR001011 Acid phosphatase, class A, bacterial AU28_RS21220 IPR011158 Nonspecific acid phosphatase, class A AU28_RS21220 IPR018296 Acid phosphatase, class A, bacterial, conserved site AU28_RS21235 IPR001647 DNA-binding HTH domain, TetR-type AU28_RS21235 IPR009057 Homeodomain-like AU28_RS21235 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AU28_RS21235 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal AU28_RS21240 IPR003834 Cytochrome c assembly protein, transmembrane domain AU28_RS21240 IPR012336 Thioredoxin-like fold AU28_RS21240 IPR017937 Thioredoxin, conserved site AU28_RS21240 IPR022910 Thiol:disulphide interchange protein DsbD AU28_RS21240 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AU28_RS21245 IPR004323 Divalent ion tolerance protein, CutA AU28_RS21245 IPR011322 Nitrogen regulatory PII-like, alpha/beta AU28_RS21245 IPR023700 Divalent cation tolerance protein CutA, bacteria AU28_RS21250 IPR004668 Anaerobic c4-dicarboxylate membrane transporter AU28_RS21255 IPR000362 Fumarate lyase family AU28_RS21255 IPR004708 Aspartate ammonia-lyase AU28_RS21255 IPR008948 L-Aspartase-like AU28_RS21255 IPR018951 Fumarase C, C-terminal AU28_RS21255 IPR020557 Fumarate lyase, conserved site AU28_RS21255 IPR022761 Fumarate lyase, N-terminal AU28_RS21255 IPR024083 Fumarase/histidase, N-terminal AU28_RS21265 IPR007313 FxsA cytoplasmic membrane protein AU28_RS21270 IPR002293 Amino acid/polyamine transporter I AU28_RS21275 IPR011032 GroES (chaperonin 10)-like AU28_RS21275 IPR018369 Chaperonin Cpn10, conserved site AU28_RS21275 IPR020818 Chaperonin Cpn10 AU28_RS21280 IPR001844 Chaperonin Cpn60 AU28_RS21280 IPR002423 Chaperonin Cpn60/TCP-1 AU28_RS21280 IPR018370 Chaperonin Cpn60, conserved site AU28_RS21280 IPR027409 GroEL-like apical domain AU28_RS21280 IPR027413 GroEL-like equatorial domain AU28_RS21285 IPR025294 Protein of unknown function DUF4156 AU28_RS21290 IPR031810 AU28_RS21290 AU28_RS21295 IPR003739 Lysine-2,3-aminomutase family AU28_RS21295 IPR007197 Radical SAM AU28_RS21295 IPR013785 Aldolase-type TIM barrel AU28_RS21295 IPR022462 Lysine-2,3-aminomutase-like AU28_RS21300 IPR001059 Translation elongation factor P/YeiP, central AU28_RS21300 IPR008991 Translation protein SH3-like domain AU28_RS21300 IPR011768 Translation elongation factor P AU28_RS21300 IPR012340 Nucleic acid-binding, OB-fold AU28_RS21300 IPR013185 Translation elongation factor, KOW-like AU28_RS21300 IPR013852 Translation elongation factor P/YeiP, conserved site AU28_RS21300 IPR014722 Ribosomal protein L2 domain 2 AU28_RS21300 IPR015365 Elongation factor P, C-terminal AU28_RS21300 IPR020599 Translation elongation factor P/YeiP AU28_RS21305 IPR012556 Entericidin EcnAB AU28_RS21310 IPR012556 Entericidin EcnAB AU28_RS21315 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS21315 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS21315 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS21320 IPR000390 Small multidrug resistance protein family AU28_RS21325 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AU28_RS21325 IPR002446 Lipocalin, bacterial AU28_RS21325 IPR011038 Calycin-like AU28_RS21325 IPR012674 Calycin AU28_RS21325 IPR022271 Lipocalin, ApoD type AU28_RS21325 IPR022272 Lipocalin family conserved site AU28_RS21330 IPR003418 Fumarate reductase, D subunit AU28_RS21335 IPR003510 Fumarate reductase, subunit C AU28_RS21340 IPR001041 2Fe-2S ferredoxin-type domain AU28_RS21340 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AU28_RS21340 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AU28_RS21340 IPR009051 Alpha-helical ferredoxin AU28_RS21340 IPR012675 Beta-grasp domain AU28_RS21340 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AU28_RS21340 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS21340 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AU28_RS21345 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AU28_RS21345 IPR003953 FAD binding domain AU28_RS21345 IPR005884 Fumarate reductase, flavoprotein subunit AU28_RS21345 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AU28_RS21345 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AU28_RS21345 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AU28_RS21345 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AU28_RS21345 IPR030664 AU28_RS21345 AU28_RS21350 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AU28_RS21350 IPR004525 Elongation factor P--(R)-beta-lysine ligase AU28_RS21350 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AU28_RS21350 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like AU28_RS21355 IPR002293 Amino acid/polyamine transporter I AU28_RS21360 IPR022553 Protein of unknown function DUF2645 AU28_RS21365 IPR006685 Mechanosensitive ion channel MscS AU28_RS21365 IPR006686 Mechanosensitive ion channel MscS, conserved site AU28_RS21365 IPR010920 Like-Sm (LSM) domain AU28_RS21365 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AU28_RS21365 IPR011066 Mechanosensitive ion channel MscS, C-terminal AU28_RS21365 IPR024393 Mechanosensitive ion channel MscS, porin domain AU28_RS21365 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AU28_RS21370 IPR003817 Phosphatidylserine decarboxylase-related AU28_RS21370 IPR033177 AU28_RS21370 AU28_RS21370 IPR033178 AU28_RS21370 AU28_RS21375 IPR004881 Ribosome biogenesis GTPase RsgA, putative AU28_RS21375 IPR010914 EngC GTPase AU28_RS21375 IPR012340 Nucleic acid-binding, OB-fold AU28_RS21375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS21380 IPR012337 Ribonuclease H-like domain AU28_RS21380 IPR013520 Exonuclease, RNase T/DNA polymerase III AU28_RS21380 IPR022894 Oligoribonuclease AU28_RS21385 IPR001320 Ionotropic glutamate receptor AU28_RS21385 IPR001638 Extracellular solute-binding protein, family 3 AU28_RS21385 IPR018313 Extracellular solute-binding protein, family 3, conserved site AU28_RS21405 IPR004453 Epoxyqueuosine reductase QueG AU28_RS21405 IPR013542 Domain of unknown function DUF1730 AU28_RS21405 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS21410 IPR000631 YjeF C-terminal domain AU28_RS21410 IPR004443 YjeF N-terminal domain AU28_RS21410 IPR017953 Carbohydrate kinase, predicted, conserved site AU28_RS21410 IPR029056 Ribokinase-like AU28_RS21410 IPR030677 AU28_RS21410 AU28_RS21415 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE AU28_RS21415 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS21420 IPR002508 Cell wall hydrolase/autolysin, catalytic AU28_RS21425 IPR002099 DNA mismatch repair protein family AU28_RS21425 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS21425 IPR013507 DNA mismatch repair protein, C-terminal AU28_RS21425 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS21425 IPR014762 DNA mismatch repair, conserved site AU28_RS21425 IPR014790 MutL, C-terminal, dimerisation AU28_RS21425 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS21425 IPR020667 DNA mismatch repair protein, MutL AU28_RS21430 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase AU28_RS21430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS21435 IPR005001 Host factor Hfq AU28_RS21435 IPR010920 Like-Sm (LSM) domain AU28_RS21440 IPR006073 GTP binding domain AU28_RS21440 IPR009022 Elongation factor G, III-V domain AU28_RS21440 IPR016496 GTPase HflX AU28_RS21440 IPR025121 GTPase HflX N-terminal domain AU28_RS21440 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS21440 IPR032305 AU28_RS21440 AU28_RS21445 IPR001107 Band 7 protein AU28_RS21445 IPR001972 Stomatin family AU28_RS21445 IPR010201 HflK AU28_RS21445 IPR020980 Menbrane protein HflK, N-terminal AU28_RS21450 IPR001107 Band 7 protein AU28_RS21450 IPR001972 Stomatin family AU28_RS21450 IPR010200 HflC AU28_RS21455 IPR019201 Protein of unknown function DUF2065 AU28_RS21460 IPR001114 Adenylosuccinate synthetase AU28_RS21460 IPR018220 Adenylosuccinate synthase, active site AU28_RS21460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS21460 IPR033128 AU28_RS21460 AU28_RS21465 IPR000944 Transcription regulator Rrf2-like AU28_RS21465 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS21465 IPR023761 Transcriptional repressor HTH, NsrR AU28_RS21470 IPR003029 Ribosomal protein S1, RNA-binding domain AU28_RS21470 IPR004476 Ribonuclease II/ribonuclease R AU28_RS21470 IPR011129 Cold shock protein AU28_RS21470 IPR011805 Ribonuclease R AU28_RS21470 IPR012340 Nucleic acid-binding, OB-fold AU28_RS21470 IPR013223 Ribonuclease B, N-terminal OB domain AU28_RS21470 IPR013668 Ribonuclease R winged-helix domain AU28_RS21470 IPR022966 Ribonuclease II/R, conserved site AU28_RS21470 IPR022967 RNA-binding domain, S1 AU28_RS21475 IPR001537 tRNA/rRNA methyltransferase, SpoU type AU28_RS21475 IPR004441 RNA methyltransferase TrmH family AU28_RS21475 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AU28_RS21475 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AU28_RS21475 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AU28_RS21475 IPR029028 Alpha/beta knot methyltransferases AU28_RS21475 IPR029064 50S ribosomal protein L30e-like AU28_RS21480 IPR019231 Protein of unknown function DUF2170 AU28_RS21485 IPR007157 PspA/IM30 AU28_RS21490 IPR013099 Two pore domain potassium channel domain AU28_RS21490 IPR016040 NAD(P)-binding domain AU28_RS21495 IPR019621 Protein of unknown function DUF2491 AU28_RS21500 IPR007140 Protein of unknown function DUF350 AU28_RS21505 IPR009576 Biofilm formation YgiB AU28_RS21510 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AU28_RS21510 IPR016185 Pre-ATP-grasp domain AU28_RS21515 IPR006089 Acyl-CoA dehydrogenase, conserved site AU28_RS21515 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AU28_RS21515 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AU28_RS21515 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AU28_RS21520 IPR010854 Domain of unknown function DUF1471 AU28_RS21520 IPR025543 Dodecin-like AU28_RS21525 IPR010854 Domain of unknown function DUF1471 AU28_RS21525 IPR025543 Dodecin-like AU28_RS21530 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AU28_RS21530 IPR029058 Alpha/Beta hydrolase fold AU28_RS21535 IPR001034 HTH DeoR N-terminal domain AU28_RS21535 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS21535 IPR014036 DeoR C-terminal sensor domain AU28_RS21535 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS21535 IPR023711 Transcription regulator HTH, UlaR AU28_RS21540 IPR001279 Beta-lactamase-like AU28_RS21540 IPR023951 L-ascorbate-6-phosphate lactonase UlaG AU28_RS21545 IPR004703 Phosphotransferase system, sugar-specific permease component AU28_RS21550 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS21555 IPR002178 PTS EIIA type-2 domain AU28_RS21555 IPR016152 Phosphotransferase/anion transporter AU28_RS21560 IPR001754 Orotidine 5'-phosphate decarboxylase domain AU28_RS21560 IPR011060 Ribulose-phosphate binding barrel AU28_RS21560 IPR013785 Aldolase-type TIM barrel AU28_RS21560 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD AU28_RS21565 IPR004560 L-ribulose-5-phosphate 3-epimerase AU28_RS21565 IPR013022 Xylose isomerase-like, TIM barrel domain AU28_RS21565 IPR023492 L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae AU28_RS21570 IPR001303 Class II aldolase/adducin N-terminal AU28_RS21570 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF AU28_RS21575 IPR010854 Domain of unknown function DUF1471 AU28_RS21575 IPR025543 Dodecin-like AU28_RS21585 IPR000529 Ribosomal protein S6 AU28_RS21585 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AU28_RS21585 IPR020814 Ribosomal protein S6, plastid/chloroplast AU28_RS21585 IPR020815 Ribosomal protein S6, conserved site AU28_RS21590 IPR000424 Primosome PriB/single-strand DNA-binding AU28_RS21590 IPR012340 Nucleic acid-binding, OB-fold AU28_RS21590 IPR023646 Primosomal replication protein PriB AU28_RS21595 IPR001648 Ribosomal protein S18 AU28_RS21595 IPR018275 Ribosomal protein S18, conserved site AU28_RS21600 IPR000244 Ribosomal protein L9 AU28_RS21600 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AU28_RS21600 IPR020069 Ribosomal protein L9, C-terminal AU28_RS21600 IPR020070 Ribosomal protein L9, N-terminal AU28_RS21600 IPR020594 Ribosomal protein L9, bacteria/chloroplast AU28_RS21605 IPR000620 Drug/metabolite transporter AU28_RS21610 IPR007340 Opacity-associated protein A AU28_RS21610 IPR013731 Opacity-associated protein A, N-terminal AU28_RS21615 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AU28_RS21615 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AU28_RS21615 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type AU28_RS21620 IPR002293 Amino acid/polyamine transporter I AU28_RS21620 IPR004840 Amino acid permease, conserved site AU28_RS21620 IPR004841 Amino acid permease/ SLC12A domain AU28_RS21625 IPR027375 DKNYY family AU28_RS21635 IPR012312 Haemerythrin/HHE cation-binding motif AU28_RS21635 IPR019903 Repair of iron centres family AU28_RS21635 IPR023742 Iron-sulfur cluster repair protein YftE AU28_RS21640 IPR000620 Drug/metabolite transporter AU28_RS21645 IPR008030 NmrA-like domain AU28_RS21645 IPR016040 NAD(P)-binding domain AU28_RS21650 IPR002577 Helix-turn-helix, HxlR type AU28_RS21650 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS21655 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AU28_RS21655 IPR006146 5'-Nucleotidase, conserved site AU28_RS21655 IPR006179 5'-Nucleotidase/apyrase AU28_RS21655 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase AU28_RS21655 IPR008334 5'-Nucleotidase, C-terminal AU28_RS21655 IPR029052 Metallo-dependent phosphatase-like AU28_RS21660 IPR000760 Inositol monophosphatase AU28_RS21660 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial AU28_RS21660 IPR020550 Inositol monophosphatase, conserved site AU28_RS21660 IPR020583 Inositol monophosphatase, metal-binding site AU28_RS21665 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AU28_RS21670 IPR009491 Protein of unknown function DUF1107 AU28_RS21675 IPR000644 CBS domain AU28_RS21675 IPR002550 Domain of unknown function DUF21 AU28_RS21675 IPR005170 Transporter-associated domain AU28_RS21675 IPR016166 FAD-binding, type 2 AU28_RS21675 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AU28_RS21680 IPR002569 Peptide methionine sulphoxide reductase MsrA AU28_RS21680 IPR028427 Peptide methionine sulfoxide reductase AU28_RS21685 IPR000184 Bacterial surface antigen (D15) AU28_RS21685 IPR010827 Surface antigen variable number AU28_RS21690 IPR007452 Protein of unknown function DUF490 AU28_RS21695 IPR009288 AIG2-like AU28_RS21695 IPR013024 Butirosin biosynthesis, BtrG-like AU28_RS21700 IPR011701 Major facilitator superfamily AU28_RS21700 IPR020846 Major facilitator superfamily domain AU28_RS21705 IPR006680 Amidohydrolase 1 AU28_RS21705 IPR011059 Metal-dependent hydrolase, composite domain AU28_RS21705 IPR032466 AU28_RS21705 AU28_RS21710 IPR008162 Inorganic pyrophosphatase AU28_RS21715 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase AU28_RS21715 IPR020548 Fructose-1,6-bisphosphatase, active site AU28_RS21715 IPR028343 Fructose-1,6-bisphosphatase AU28_RS21715 IPR033391 AU28_RS21715 AU28_RS21720 IPR000713 Mur ligase, N-terminal AU28_RS21720 IPR004101 Mur ligase, C-terminal AU28_RS21720 IPR005757 Murein peptide ligase AU28_RS21720 IPR013221 Mur ligase, central AU28_RS21720 IPR016040 NAD(P)-binding domain AU28_RS21725 IPR006839 Ribosome-associated, YjgA AU28_RS21725 IPR023153 PSPTO4464-like domain AU28_RS21730 IPR002510 TldD/PmbA AU28_RS21735 IPR009155 Cytochrome b562 AU28_RS21735 IPR010980 Cytochrome c/b562 AU28_RS21740 IPR011608 PRD domain AU28_RS21740 IPR020044 PRD domain protein, EF0829/AHA3910 AU28_RS21745 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 AU28_RS21750 IPR020037 Protein of unknown function DUF4312 AU28_RS21755 IPR020042 Protein of unknown function DUF4311 AU28_RS21760 IPR025456 Protein of unknown function DUF4310 AU28_RS21765 IPR006680 Amidohydrolase 1 AU28_RS21765 IPR011059 Metal-dependent hydrolase, composite domain AU28_RS21765 IPR020043 Amidohydrolase EF0837/AHA3915, putative AU28_RS21765 IPR032466 AU28_RS21765 AU28_RS21770 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like AU28_RS21770 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AU28_RS21770 IPR015424 Pyridoxal phosphate-dependent transferase AU28_RS21770 IPR018319 L-seryl-tRNA selenium transferase-like AU28_RS21775 IPR010763 Protein of unknown function DUF1341 AU28_RS21780 IPR002178 PTS EIIA type-2 domain AU28_RS21780 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AU28_RS21780 IPR007737 Mga helix-turn-helix domain AU28_RS21780 IPR011608 PRD domain AU28_RS21780 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS21780 IPR013196 Helix-turn-helix, type 11 AU28_RS21780 IPR016152 Phosphotransferase/anion transporter AU28_RS21780 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AU28_RS21785 IPR007337 RelB antitoxin/Antitoxin DinJ AU28_RS21790 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AU28_RS21795 IPR001989 Radical-activating enzyme, conserved site AU28_RS21795 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic AU28_RS21795 IPR013785 Aldolase-type TIM barrel AU28_RS21800 IPR005144 ATP-cone AU28_RS21800 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic AU28_RS21800 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AU28_RS21810 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AU28_RS21810 IPR012769 Trehalose-6-phosphate hydrolase AU28_RS21810 IPR013780 Glycosyl hydrolase, family 13, all-beta AU28_RS21810 IPR013781 Glycoside hydrolase, catalytic domain AU28_RS21810 IPR015902 Glycoside hydrolase, family 13 AU28_RS21810 IPR017853 Glycoside hydrolase, superfamily AU28_RS21810 IPR022567 Domain of unknown function DUF3459 AU28_RS21815 IPR001996 Phosphotransferase system, IIB component, type 1 AU28_RS21815 IPR003352 Phosphotransferase system, EIIC AU28_RS21815 IPR011296 Phosphotransferase system, trehalose-specific IIBC component AU28_RS21815 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AU28_RS21820 IPR000843 Transcription regulator HTH, LacI AU28_RS21820 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS21820 IPR012771 Trehalose operon repressor AU28_RS21820 IPR028082 Periplasmic binding protein-like I AU28_RS21825 IPR001757 Cation-transporting P-type ATPase AU28_RS21825 IPR004014 Cation-transporting P-type ATPase, N-terminal AU28_RS21825 IPR006068 Cation-transporting P-type ATPase, C-terminal AU28_RS21825 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB AU28_RS21825 IPR008250 P-type ATPase, A domain AU28_RS21825 IPR018303 P-type ATPase, phosphorylation site AU28_RS21825 IPR023214 HAD-like domain AU28_RS21825 IPR023298 P-type ATPase, transmembrane domain AU28_RS21825 IPR023299 P-type ATPase, cytoplasmic domain N AU28_RS21830 IPR002514 Transposase IS3/IS911family AU28_RS21830 IPR009057 Homeodomain-like AU28_RS21835 IPR006056 Enamine/imine deaminase YjgF-like AU28_RS21835 IPR006175 YjgF/Yer057p/UK114 family AU28_RS21835 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AU28_RS21835 IPR019897 YjgF-like protein, conserved site AU28_RS21840 IPR002801 Aspartate transcarbamylase regulatory subunit AU28_RS21840 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AU28_RS21840 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AU28_RS21845 IPR002082 Aspartate carbamoyltransferase AU28_RS21845 IPR006130 Aspartate/ornithine carbamoyltransferase AU28_RS21845 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AU28_RS21845 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AU28_RS21850 IPR012602 PyrBI operon leader peptide AU28_RS21855 IPR001669 Arginine repressor AU28_RS21855 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS21855 IPR020899 Arginine repressor, C-terminal AU28_RS21855 IPR020900 Arginine repressor, DNA-binding domain AU28_RS21855 IPR024946 Arginine repressor C-terminal-like domain AU28_RS21860 IPR018385 C4-dicarboxylate anaerobic carrier-like AU28_RS21865 IPR002292 Ornithine/putrescine carbamoyltransferase AU28_RS21865 IPR006130 Aspartate/ornithine carbamoyltransferase AU28_RS21865 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AU28_RS21865 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AU28_RS21865 IPR024904 Ornithine carbamoyltransferase AU28_RS21870 IPR001048 Aspartate/glutamate/uridylate kinase AU28_RS21870 IPR003964 Carbamate kinase AU28_RS21875 IPR003876 Arginine deiminase AU28_RS21875 IPR033199 AU28_RS21875 AU28_RS21880 IPR004375 Conserved hypothetical protein CHP00022 AU28_RS21885 IPR002292 Ornithine/putrescine carbamoyltransferase AU28_RS21885 IPR006130 Aspartate/ornithine carbamoyltransferase AU28_RS21885 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AU28_RS21885 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AU28_RS21885 IPR024904 Ornithine carbamoyltransferase AU28_RS21890 IPR009671 Regulator of ribonuclease activity B domain AU28_RS21890 IPR016716 Regulator of ribonuclease activity B AU28_RS21895 IPR009078 Ferritin-like superfamily AU28_RS21895 IPR010386 tRNA-hydroxylase MiaE AU28_RS21895 IPR012347 Ferritin-related AU28_RS21900 IPR022061 Protein of unknown function DUF3617 AU28_RS21905 IPR022061 Protein of unknown function DUF3617 AU28_RS21910 IPR000182 GNAT domain AU28_RS21910 IPR016181 Acyl-CoA N-acyltransferase AU28_RS21915 IPR010295 Protein of unknown function DUF898 AU28_RS21920 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AU28_RS21920 IPR002300 Aminoacyl-tRNA synthetase, class Ia AU28_RS21920 IPR002303 Valine-tRNA ligase AU28_RS21920 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AU28_RS21920 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AU28_RS21920 IPR010978 tRNA-binding arm AU28_RS21920 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AU28_RS21920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS21920 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm AU28_RS21925 IPR007459 DNA polymerase III chi subunit, HolC AU28_RS21930 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AU28_RS21930 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal AU28_RS21930 IPR011356 Leucine aminopeptidase/peptidase B AU28_RS21930 IPR023042 Peptidase M17, leucine aminopeptidase AU28_RS21940 IPR005495 Permease YjgP/YjgQ, predicted AU28_RS21940 IPR030922 AU28_RS21940 AU28_RS21945 IPR005495 Permease YjgP/YjgQ, predicted AU28_RS21945 IPR030923 AU28_RS21945 AU28_RS21950 IPR000843 Transcription regulator HTH, LacI AU28_RS21950 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS21950 IPR028082 Periplasmic binding protein-like I AU28_RS21955 IPR003474 Gluconate transporter AU28_RS21960 IPR002347 Glucose/ribitol dehydrogenase AU28_RS21960 IPR016040 NAD(P)-binding domain AU28_RS21960 IPR020904 Short-chain dehydrogenase/reductase, conserved site AU28_RS21965 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS21965 IPR011032 GroES (chaperonin 10)-like AU28_RS21965 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS21965 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS21965 IPR016040 NAD(P)-binding domain AU28_RS21970 IPR006001 Carbohydrate kinase, thermoresistant glucokinase AU28_RS21970 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS21970 IPR031322 AU28_RS21970 AU28_RS21975 IPR002085 Alcohol dehydrogenase superfamily, zinc-type AU28_RS21975 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AU28_RS21975 IPR011032 GroES (chaperonin 10)-like AU28_RS21975 IPR013149 Alcohol dehydrogenase, C-terminal AU28_RS21975 IPR013154 Alcohol dehydrogenase GroES-like AU28_RS21975 IPR016040 NAD(P)-binding domain AU28_RS21975 IPR020843 Polyketide synthase, enoylreductase AU28_RS21975 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AU28_RS21985 IPR009057 Homeodomain-like AU28_RS21985 IPR031339 AU28_RS21985 AU28_RS21990 IPR002145 Ribbon-helix-helix protein, copG AU28_RS21990 IPR010985 Ribbon-helix-helix AU28_RS21995 IPR009956 Post-segregation antitoxin CcdA AU28_RS22000 IPR002712 Toxin CcdB AU28_RS22000 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AU28_RS22005 IPR001584 Integrase, catalytic core AU28_RS22005 IPR012337 Ribonuclease H-like domain AU28_RS22010 IPR009057 Homeodomain-like AU28_RS22010 IPR025948 HTH-like domain AU28_RS22015 IPR010498 Fimbrial protein SefA AU28_RS22020 IPR001829 Pili assembly chaperone, bacterial AU28_RS22020 IPR008962 PapD-like AU28_RS22020 IPR016147 PapD, N-terminal, bacterial AU28_RS22020 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS22020 IPR018046 Pili assembly chaperone, conserved site AU28_RS22025 IPR000015 Outer membrane usher protein AU28_RS22025 IPR025885 PapC, N-terminal domain AU28_RS22025 IPR025949 PapC-like, C-terminal domain AU28_RS22030 IPR008394 Enterobacteria AfaD invasin AU28_RS22030 IPR008966 Adhesion domain AU28_RS22035 IPR009057 Homeodomain-like AU28_RS22035 IPR018060 DNA binding HTH domain, AraC-type AU28_RS22035 IPR018062 HTH domain AraC-type, conserved site AU28_RS22040 IPR006793 FaeA-like protein AU28_RS22040 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS22045 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS22045 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS22045 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS22055 IPR001853 DSBA-like thioredoxin domain AU28_RS22055 IPR012336 Thioredoxin-like fold AU28_RS22055 IPR017937 Thioredoxin, conserved site AU28_RS22055 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AU28_RS22060 IPR009722 SdiA-regulated AU28_RS22060 IPR015943 WD40/YVTN repeat-like-containing domain AU28_RS22065 IPR002514 Transposase IS3/IS911family AU28_RS22065 IPR009057 Homeodomain-like AU28_RS22075 IPR001584 Integrase, catalytic core AU28_RS22075 IPR012337 Ribonuclease H-like domain AU28_RS22085 IPR002876 Transcriptional regulator TACO1-like AU28_RS22085 IPR017856 Integrase, N-terminal zinc-binding domain-like AU28_RS22085 IPR026562 Probable transcriptional regulatory protein YeeN AU28_RS22085 IPR026563 Transcriptional regulator TACO1-like, domain 2 AU28_RS22085 IPR026564 Transcriptional regulator TACO1-like, domain 3 AU28_RS22085 IPR029072 YebC-like AU28_RS22090 IPR025714 Methyltransferase domain AU28_RS22090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS22095 IPR018654 Protein of unknown function DUF2084 AU28_RS22105 IPR009412 Protein of unknown function DUF1062 AU28_RS22115 IPR005180 Domain of unknown function DUF302 AU28_RS22120 IPR002925 Dienelactone hydrolase AU28_RS22120 IPR029058 Alpha/Beta hydrolase fold AU28_RS22125 IPR000524 Transcription regulator HTH, GntR AU28_RS22125 IPR008920 Transcription regulator FadR/GntR, C-terminal AU28_RS22125 IPR011711 GntR, C-terminal AU28_RS22125 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS22130 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AU28_RS22130 IPR002305 Aminoacyl-tRNA synthetase, class Ic AU28_RS22130 IPR002306 Tryptophan-tRNA ligase AU28_RS22130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS22140 IPR008514 Type VI secretion system effector, Hcp AU28_RS22145 IPR001920 Asp/Glu racemase AU28_RS22145 IPR004380 Aspartate racemase AU28_RS22145 IPR015942 Asp/Glu/hydantoin racemase AU28_RS22145 IPR018187 Asp/Glu racemase, active site AU28_RS22145 IPR033134 AU28_RS22145 AU28_RS22150 IPR000847 Transcription regulator HTH, LysR AU28_RS22150 IPR005119 LysR, substrate-binding AU28_RS22150 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS22155 IPR006680 Amidohydrolase 1 AU28_RS22155 IPR010229 Peptidase M38, beta-aspartyl dipeptidase AU28_RS22155 IPR011059 Metal-dependent hydrolase, composite domain AU28_RS22155 IPR013108 Amidohydrolase 3 AU28_RS22155 IPR032466 AU28_RS22155 AU28_RS22160 IPR011642 Nucleoside recognition Gate AU28_RS22165 IPR011642 Nucleoside recognition Gate AU28_RS22175 IPR010645 Domain of unknown function DUF1228 AU28_RS22175 IPR020846 Major facilitator superfamily domain AU28_RS22180 IPR007383 Protein of unknown function DUF445 AU28_RS22185 IPR005829 Sugar transporter, conserved site AU28_RS22185 IPR011701 Major facilitator superfamily AU28_RS22185 IPR020846 Major facilitator superfamily domain AU28_RS22190 IPR006842 Transposase (putative), YhgA-like AU28_RS22190 IPR010106 Conserved hypothetical protein CHP01784 AU28_RS22195 IPR015590 Aldehyde dehydrogenase domain AU28_RS22195 IPR016160 Aldehyde dehydrogenase, cysteine active site AU28_RS22195 IPR016161 Aldehyde/histidinol dehydrogenase AU28_RS22195 IPR016162 Aldehyde dehydrogenase, N-terminal AU28_RS22195 IPR016163 Aldehyde dehydrogenase, C-terminal AU28_RS22195 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AU28_RS22205 IPR009506 Protein of unknown function DUF1127 AU28_RS22210 IPR002793 Endonuclease NucS AU28_RS22215 IPR004473 Restriction endonuclease, type I, HsdR AU28_RS22215 IPR006935 Helicase/UvrB domain AU28_RS22215 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal AU28_RS22215 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AU28_RS22215 IPR021810 Protein of unknown function DUF3387 AU28_RS22215 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS22220 IPR000055 Restriction endonuclease, type I, HsdS AU28_RS22225 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS22225 IPR003356 DNA methylase, adenine-specific AU28_RS22225 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AU28_RS22225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS22230 IPR007560 Restriction endonuclease type IV, Mrr AU28_RS22235 IPR007560 Restriction endonuclease type IV, Mrr AU28_RS22235 IPR011856 tRNA endonuclease-like domain AU28_RS22245 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS22245 IPR003356 DNA methylase, adenine-specific AU28_RS22245 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS22250 IPR000055 Restriction endonuclease, type I, HsdS AU28_RS22260 IPR000212 DNA helicase, UvrD/REP type AU28_RS22260 IPR011528 Nuclease-related domain, NERD AU28_RS22260 IPR014017 DNA helicase, UvrD-like, C-terminal AU28_RS22260 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS22265 IPR007460 Burkholderia phage Bups phi1, Orf7.3 AU28_RS22270 IPR025528 Protein of unknown function DUF4415 AU28_RS22275 IPR003495 CobW/HypB/UreG domain AU28_RS22275 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AU28_RS22275 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS22280 IPR007423 Protein of unknown function DUF466 AU28_RS22285 IPR003706 Carbon starvation protein CstA AU28_RS22285 IPR025299 CstA C-terminal domain AU28_RS22290 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding AU28_RS22290 IPR003660 HAMP linker domain AU28_RS22290 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AU28_RS22290 IPR004090 Chemotaxis methyl-accepting receptor AU28_RS22290 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AU28_RS22295 IPR002078 RNA polymerase sigma factor 54 interaction domain AU28_RS22295 IPR003593 AAA+ ATPase domain AU28_RS22295 IPR004701 Phosphotransferase system, mannose-type IIA component AU28_RS22295 IPR011608 PRD domain AU28_RS22295 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS22295 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AU28_RS22295 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AU28_RS22295 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS22300 IPR004701 Phosphotransferase system, mannose-type IIA component AU28_RS22305 IPR004720 Phosphotransferase system, sorbose subfamily IIB component AU28_RS22310 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit AU28_RS22315 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component AU28_RS22320 IPR001347 Sugar isomerase (SIS) AU28_RS22325 IPR001347 Sugar isomerase (SIS) AU28_RS22325 IPR024713 Fructosamine deglycase FrlB AU28_RS22330 IPR000917 Sulfatase AU28_RS22330 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS22330 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS22330 IPR020881 Phosphoglycerol transferase I AU28_RS22335 IPR019637 Protein of unknown function DUF2501 AU28_RS22340 IPR002611 IstB-like ATP-binding protein AU28_RS22340 IPR003593 AAA+ ATPase domain AU28_RS22340 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS22340 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AU28_RS22345 IPR020917 Primosomal protein 1 AU28_RS22350 IPR020914 Uncharacterised protein family UPF0442 AU28_RS22350 IPR024528 Domain of unknown function DUF3815 AU28_RS22355 IPR010619 Domain of unknown function DUF1212 AU28_RS22360 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS22360 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS22360 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS22365 IPR000792 Transcription regulator LuxR, C-terminal AU28_RS22365 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS22365 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS22370 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AU28_RS22375 IPR008090 Ferric iron reductase AU28_RS22375 IPR022770 Ferric iron reductase FhuF domain AU28_RS22375 IPR024726 Ferric iron reductase, C-terminal AU28_RS22380 IPR000160 GGDEF domain AU28_RS22380 IPR029787 Nucleotide cyclase AU28_RS22385 IPR009885 Protein of unknown function DUF1435 AU28_RS22405 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AU28_RS22405 IPR007848 Methyltransferase small domain AU28_RS22405 IPR013675 Methyltransferase small, N-terminal AU28_RS22405 IPR023543 rRNA small subunit methyltransferase C AU28_RS22405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AU28_RS22410 IPR004615 DNA polymerase III, psi subunit AU28_RS22410 IPR018382 DNA polymerase III, psi subunit, subgroup AU28_RS22415 IPR000182 GNAT domain AU28_RS22415 IPR006464 Ribosomal-protein-alanine acetyltransferase AU28_RS22415 IPR016181 Acyl-CoA N-acyltransferase AU28_RS22420 IPR006439 HAD hydrolase, subfamily IA AU28_RS22420 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB AU28_RS22420 IPR023198 Phosphoglycolate phosphatase, domain 2 AU28_RS22420 IPR023214 HAD-like domain AU28_RS22425 IPR000795 Elongation factor, GTP-binding domain AU28_RS22425 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AU28_RS22425 IPR004548 Peptide chain release factor 3 AU28_RS22425 IPR005225 Small GTP-binding protein domain AU28_RS22425 IPR009000 Translation protein, beta-barrel domain AU28_RS22425 IPR009022 Elongation factor G, III-V domain AU28_RS22425 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS22425 IPR031157 AU28_RS22425 AU28_RS22425 IPR032090 AU28_RS22425 AU28_RS22430 IPR007055 BON domain AU28_RS22430 IPR014004 Transport-associated and nodulation domain, bacteria AU28_RS22435 IPR009760 Protein of unknown function DUF1328 AU28_RS22440 IPR002641 Patatin/Phospholipase A2-related AU28_RS22440 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AU28_RS22445 IPR001130 TatD family AU28_RS22445 IPR018228 Deoxyribonuclease, TatD-related, conserved site AU28_RS22445 IPR032466 AU28_RS22445 AU28_RS22450 IPR001989 Radical-activating enzyme, conserved site AU28_RS22450 IPR007197 Radical SAM AU28_RS22450 IPR012839 Glycyl radical enzyme activase AU28_RS22450 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AU28_RS22450 IPR023912 Glycyl radical enzyme activase, YjjW, bact AU28_RS22455 IPR016905 Glycyl radical enzyme, HI0521, predicted AU28_RS22460 IPR002915 DeoC/FbaB/ lacD aldolase AU28_RS22460 IPR011343 Deoxyribose-phosphate aldolase AU28_RS22460 IPR013785 Aldolase-type TIM barrel AU28_RS22460 IPR023649 Deoxyribose-phosphate aldolase type II AU28_RS22465 IPR000053 Pyrimidine-nucleoside phosphorylase AU28_RS22465 IPR000312 Glycosyl transferase, family 3 AU28_RS22465 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal AU28_RS22465 IPR013465 Thymidine phosphorylase AU28_RS22465 IPR017459 Glycosyl transferase family 3, N-terminal domain AU28_RS22465 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site AU28_RS22465 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic AU28_RS22470 IPR006124 Metalloenzyme AU28_RS22470 IPR010045 Phosphopentomutase AU28_RS22470 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AU28_RS22470 IPR017850 Alkaline-phosphatase-like, core domain AU28_RS22470 IPR024052 Phosphopentomutase DeoB cap domain AU28_RS22475 IPR000845 Nucleoside phosphorylase domain AU28_RS22475 IPR004402 Purine nucleoside phosphorylase DeoD-type AU28_RS22475 IPR018016 Nucleoside phosphorylase, conserved site AU28_RS22475 IPR018017 Nucleoside phosphorylase AU28_RS22480 IPR012893 HipA-like, C-terminal AU28_RS22480 IPR012894 HipA, N-terminal subdomain 2 AU28_RS22485 IPR004143 Biotin/lipoate A/B protein ligase AU28_RS22485 IPR004562 Lipoyltransferase/lipoate-protein ligase AU28_RS22485 IPR019491 Lipoate protein ligase, C-terminal AU28_RS22485 IPR023741 Lipoate-protein ligase A AU28_RS22490 IPR019305 Uncharacterised protein family Smp AU28_RS22495 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like AU28_RS22495 IPR023190 Phosphoserine phosphatase, domain 2 AU28_RS22495 IPR023214 HAD-like domain AU28_RS22500 IPR003593 AAA+ ATPase domain AU28_RS22500 IPR004504 DNA repair protein RadA AU28_RS22500 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS22500 IPR020568 Ribosomal protein S5 domain 2-type fold AU28_RS22500 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS22505 IPR001387 Cro/C1-type helix-turn-helix domain AU28_RS22505 IPR004821 Cytidyltransferase-like domain AU28_RS22505 IPR006417 Nicotinamide-nucleotide adenylyltransferase AU28_RS22505 IPR010982 Lambda repressor-like, DNA-binding domain AU28_RS22505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AU28_RS22505 IPR016429 Bifunctional transcriptional regulator NadR AU28_RS22505 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS22510 IPR003439 ABC transporter-like AU28_RS22510 IPR003593 AAA+ ATPase domain AU28_RS22510 IPR017871 ABC transporter, conserved site AU28_RS22510 IPR022374 ABC transporter, ATP-binding protein, ChvD AU28_RS22510 IPR027417 P-loop containing nucleoside triphosphate hydrolase AU28_RS22510 IPR032781 AU28_RS22510 AU28_RS22515 IPR000189 Prokaryotic transglycosylase, active site AU28_RS22515 IPR008258 Lytic transglycosylase-like SLT domain AU28_RS22515 IPR008939 Lytic transglycosylase, superhelical U-shaped AU28_RS22515 IPR012289 Lytic transglycosylase, superhelical linker AU28_RS22515 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain AU28_RS22515 IPR023346 Lysozyme-like domain AU28_RS22520 IPR000831 Trp repressor AU28_RS22520 IPR010921 Trp repressor/replication initiator AU28_RS22520 IPR013335 Trp repressor, bacterial AU28_RS22525 IPR002786 Non-canonical purine NTP phosphatase AU28_RS22525 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AU28_RS22525 IPR029001 Inosine triphosphate pyrophosphatase-like AU28_RS22530 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site AU28_RS22530 IPR013078 Histidine phosphatase superfamily, clade-1 AU28_RS22530 IPR023086 Phosphoglycerate mutase, GpmB, probable AU28_RS22530 IPR029033 Histidine phosphatase superfamily AU28_RS22535 IPR009057 Homeodomain-like AU28_RS22535 IPR010499 Bacterial transcription activator, effector binding AU28_RS22535 IPR011256 Regulatory factor, effector binding domain AU28_RS22535 IPR018060 DNA binding HTH domain, AraC-type AU28_RS22535 IPR018062 HTH domain AraC-type, conserved site AU28_RS22535 IPR020449 Transcription regulator HTH, AraC- type AU28_RS22535 IPR029442 GyrI-like small molecule binding domain AU28_RS22540 IPR010292 Uncharacterised protein family CreA AU28_RS22545 IPR001789 Signal transduction response regulator, receiver domain AU28_RS22545 IPR001867 Signal transduction response regulator, C-terminal AU28_RS22545 IPR011006 CheY-like superfamily AU28_RS22545 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS22545 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS22550 IPR003594 Histidine kinase-like ATPase, C-terminal domain AU28_RS22550 IPR003660 HAMP linker domain AU28_RS22550 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AU28_RS22550 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AU28_RS22550 IPR029151 Periplasmic sensor domain-like AU28_RS22550 IPR033463 AU28_RS22550 AU28_RS22555 IPR010364 Uncharacterised protein family, inner membrane CreD AU28_RS22560 IPR000259 Fimbrial-type adhesion domain AU28_RS22560 IPR008966 Adhesion domain AU28_RS22565 IPR000259 Fimbrial-type adhesion domain AU28_RS22565 IPR008966 Adhesion domain AU28_RS22570 IPR000015 Outer membrane usher protein AU28_RS22570 IPR018030 Fimbrial membrane usher, conserved site AU28_RS22570 IPR025885 PapC, N-terminal domain AU28_RS22570 IPR025949 PapC-like, C-terminal domain AU28_RS22575 IPR001829 Pili assembly chaperone, bacterial AU28_RS22575 IPR008962 PapD-like AU28_RS22575 IPR016147 PapD, N-terminal, bacterial AU28_RS22575 IPR016148 Pili assembly chaperone, C-terminal domain AU28_RS22575 IPR018046 Pili assembly chaperone, conserved site AU28_RS22580 IPR000259 Fimbrial-type adhesion domain AU28_RS22580 IPR008966 Adhesion domain AU28_RS22585 IPR018490 Cyclic nucleotide-binding-like AU28_RS22595 IPR001789 Signal transduction response regulator, receiver domain AU28_RS22595 IPR001867 Signal transduction response regulator, C-terminal AU28_RS22595 IPR011006 CheY-like superfamily AU28_RS22595 IPR011991 Winged helix-turn-helix DNA-binding domain AU28_RS22595 IPR016032 Signal transduction response regulator, C-terminal effector AU28_RS22605 IPR001537 tRNA/rRNA methyltransferase, SpoU type AU28_RS22605 IPR004384 RNA methyltransferase TrmH, group 1 AU28_RS22605 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AU28_RS22605 IPR029028 Alpha/beta knot methyltransferases AU28_RS22610 IPR011720 Thr operon leader peptide AU28_RS22615 IPR001048 Aspartate/glutamate/uridylate kinase AU28_RS22615 IPR001341 Aspartate kinase domain AU28_RS22615 IPR001342 Homoserine dehydrogenase, catalytic AU28_RS22615 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AU28_RS22615 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I AU28_RS22615 IPR016040 NAD(P)-binding domain AU28_RS22615 IPR018042 Aspartate kinase, conserved site AU28_RS22615 IPR019811 Homoserine dehydrogenase, conserved site AU28_RS22615 IPR027795 GATS-like ACT domain AU28_RS22620 IPR000870 Homoserine kinase AU28_RS22620 IPR006203 GHMP kinase, ATP-binding, conserved site AU28_RS22620 IPR006204 GHMP kinase N-terminal domain AU28_RS22620 IPR013750 GHMP kinase, C-terminal domain AU28_RS22620 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AU28_RS22620 IPR020568 Ribosomal protein S5 domain 2-type fold