AU46_RS00040	SM00852	Probable molybdopterin binding domain
AU46_RS00065	SM00271	DnaJ molecular chaperone homology domain
AU46_RS00090	SM00495	Chitin-binding domain type 3
AU46_RS00090	SM00636	AU46_RS00090
AU46_RS00150	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS00230	SM00904	Riboflavin kinase
AU46_RS00270	SM00448	cheY-homologous receiver domain
AU46_RS00275	SM00091	PAS domain
AU46_RS00275	SM00387	Histidine kinase-like ATPases
AU46_RS00300	SM00764	Citrate lyase ligase C-terminal domain
AU46_RS00335	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AU46_RS00340	SM00851	MGS-like domain
AU46_RS00340	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AU46_RS00385	SM00893	Electron transfer flavoprotein domain
AU46_RS00390	SM00893	Electron transfer flavoprotein domain
AU46_RS00465	SM00650	Ribosomal RNA adenine dimethylases
AU46_RS00485	SM00271	DnaJ molecular chaperone homology domain
AU46_RS00495	SM00487	DEAD-like helicases superfamily
AU46_RS00495	SM00490	helicase superfamily c-terminal domain
AU46_RS00500	SM00486	DNA polymerase type-B family
AU46_RS00515	SM01007	Class II Aldolase and Adducin N-terminal domain
AU46_RS00530	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS00540	SM00382	ATPases associated with a variety of cellular activities
AU46_RS00580	SM01329	AU46_RS00580
AU46_RS00585	SM00917	LeuA allosteric (dimerisation) domain
AU46_RS00610	SM00354	helix_turn _helix lactose operon repressor
AU46_RS00680	SM00842	Cell division protein FtsA
AU46_RS00685	SM00864	Tubulin/FtsZ family, GTPase domain
AU46_RS00685	SM00865	Tubulin/FtsZ family, C-terminal domain
AU46_RS00700	SM00957	SecA DEAD-like domain
AU46_RS00700	SM00958	SecA preprotein cross-linking domain
AU46_RS00735	SM01240	AU46_RS00735
AU46_RS00760	SM00644	AU46_RS00760
AU46_RS00785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS00785	SM00895	AU46_RS00785
AU46_RS00830	SM00226	Low molecular weight phosphatase family
AU46_RS00855	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS00855	SM01134	AU46_RS00855
AU46_RS00880	SM00564	beta-propeller repeat
AU46_RS00890	SM00947	Carbonic anhydrase
AU46_RS00895	SM00382	ATPases associated with a variety of cellular activities
AU46_RS00980	SM00487	DEAD-like helicases superfamily
AU46_RS00980	SM00490	helicase superfamily c-terminal domain
AU46_RS00980	SM00847	Helicase associated domain (HA2)  Add an annotation
AU46_RS00995	SM00382	ATPases associated with a variety of cellular activities
AU46_RS01075	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AU46_RS01080	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AU46_RS01090	SM01276	AU46_RS01090
AU46_RS01110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AU46_RS01155	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AU46_RS01165	SM00935	Outer membrane protein (OmpH-like)
AU46_RS01195	SM00481	DNA polymerase alpha chain like domain
AU46_RS01205	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AU46_RS01220	SM00977	TilS substrate C-terminal domain
AU46_RS01235	SM01322	AU46_RS01235
AU46_RS01275	SM00382	ATPases associated with a variety of cellular activities
AU46_RS01275	SM00930	AU46_RS01275
AU46_RS01340	SM00257	Lysin motif
AU46_RS01345	SM00849	Metallo-beta-lactamase superfamily
AU46_RS01360	SM00479	AU46_RS01360
AU46_RS01555	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AU46_RS01665	SM00052	Putative diguanylate phosphodiesterase
AU46_RS01720	SM00422	helix_turn_helix, mercury resistance
AU46_RS01770	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS01790	SM00382	ATPases associated with a variety of cellular activities
AU46_RS01815	SM01004	Delta-aminolevulinic acid dehydratase
AU46_RS01820	SM00869	Autotransporter beta-domain
AU46_RS01880	SM00267	diguanylate cyclase
AU46_RS01945	SM00448	cheY-homologous receiver domain
AU46_RS01945	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS01950	SM00091	PAS domain
AU46_RS01950	SM00387	Histidine kinase-like ATPases
AU46_RS01950	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS01965	SM00642	Alpha-amylase domain
AU46_RS01990	SM01323	AU46_RS01990
AU46_RS02015	SM00507	HNH nucleases
AU46_RS02070	SM00861	Transketolase, pyrimidine binding domain
AU46_RS02085	SM00981	AU46_RS02085
AU46_RS02100	SM00382	ATPases associated with a variety of cellular activities
AU46_RS02110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS02110	SM00866	AU46_RS02110
AU46_RS02145	SM00671	Sel1-like repeats.
AU46_RS02150	SM00671	Sel1-like repeats.
AU46_RS02205	SM00382	ATPases associated with a variety of cellular activities
AU46_RS02205	SM00994	ClpX C4-type zinc finger
AU46_RS02205	SM01086	C-terminal, D2-small domain, of ClpB protein
AU46_RS02210	SM00382	ATPases associated with a variety of cellular activities
AU46_RS02210	SM00464	Found in ATP-dependent protease La (LON)
AU46_RS02215	SM00411	bacterial (prokaryotic) histone like domain
AU46_RS02255	SM00344	helix_turn_helix ASNC type
AU46_RS02260	SM00382	ATPases associated with a variety of cellular activities
AU46_RS02265	SM00382	ATPases associated with a variety of cellular activities
AU46_RS02270	SM00938	Nitrogen regulatory protein P-II
AU46_RS02295	SM00052	Putative diguanylate phosphodiesterase
AU46_RS02315	SM01266	AU46_RS02315
AU46_RS02375	SM00382	ATPases associated with a variety of cellular activities
AU46_RS02385	SM00493	AU46_RS02385
AU46_RS02390	SM00387	Histidine kinase-like ATPases
AU46_RS02450	SM00422	helix_turn_helix, mercury resistance
AU46_RS02460	SM00244	prohibitin homologues
AU46_RS02465	SM00382	ATPases associated with a variety of cellular activities
AU46_RS02480	SM00822	AU46_RS02480
AU46_RS02490	SM00382	ATPases associated with a variety of cellular activities
AU46_RS02510	SM00382	ATPases associated with a variety of cellular activities
AU46_RS02510	SM00930	AU46_RS02510
AU46_RS02520	SM00450	Rhodanese Homology Domain
AU46_RS02535	SM00346	helix_turn_helix isocitrate lyase regulation
AU46_RS02620	SM01001	AIR carboxylase
AU46_RS02635	SM00840	AU46_RS02635
AU46_RS02695	SM00421	helix_turn_helix, Lux Regulon
AU46_RS02695	SM00448	cheY-homologous receiver domain
AU46_RS02710	SM00421	helix_turn_helix, Lux Regulon
AU46_RS02745	SM00387	Histidine kinase-like ATPases
AU46_RS02755	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS02790	SM00869	Autotransporter beta-domain
AU46_RS02810	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS02840	SM00923	MbtH-like protein
AU46_RS02845	SM00824	Thioesterase
AU46_RS02855	SM00382	ATPases associated with a variety of cellular activities
AU46_RS02895	SM00822	AU46_RS02895
AU46_RS02925	SM00470	ParB-like nuclease domain
AU46_RS02960	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS03025	SM00764	Citrate lyase ligase C-terminal domain
AU46_RS03030	SM00091	PAS domain
AU46_RS03030	SM00387	Histidine kinase-like ATPases
AU46_RS03035	SM00448	cheY-homologous receiver domain
AU46_RS03050	SM00357	Cold shock protein domain
AU46_RS03070	SM00729	Elongator protein 3, MiaB family, Radical SAM
AU46_RS03090	SM00936	Penicillin-binding protein 5, C-terminal domain 
AU46_RS03125	SM00855	Phosphoglycerate mutase family
AU46_RS03155	SM00858	AU46_RS03155
AU46_RS03170	SM00382	ATPases associated with a variety of cellular activities
AU46_RS03180	SM00671	Sel1-like repeats.
AU46_RS03190	SM00271	DnaJ molecular chaperone homology domain
AU46_RS03220	SM00382	ATPases associated with a variety of cellular activities
AU46_RS03235	SM00062	Bacterial periplasmic substrate-binding proteins
AU46_RS03245	SM00116	Domain in cystathionine beta-synthase and other proteins.
AU46_RS03245	SM01091	Transporter associated domain
AU46_RS03260	SM00729	Elongator protein 3, MiaB family, Radical SAM
AU46_RS03425	SM00448	cheY-homologous receiver domain
AU46_RS03425	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS03430	SM00387	Histidine kinase-like ATPases
AU46_RS03430	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS03475	SM00796	Allophanate hydrolase subunit 1
AU46_RS03480	SM00797	Allophanate hydrolase subunit 2
AU46_RS03490	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AU46_RS03490	SM01232	AU46_RS03490
AU46_RS03530	SM00861	Transketolase, pyrimidine binding domain
AU46_RS03545	SM00881	CoA binding domain
AU46_RS03720	SM00382	ATPases associated with a variety of cellular activities
AU46_RS03725	SM00855	Phosphoglycerate mutase family
AU46_RS03755	SM00382	ATPases associated with a variety of cellular activities
AU46_RS03780	SM00382	ATPases associated with a variety of cellular activities
AU46_RS03810	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS03810	SM00866	AU46_RS03810
AU46_RS03835	SM00729	Elongator protein 3, MiaB family, Radical SAM
AU46_RS03835	SM00876	Biotin and Thiamin Synthesis associated domain
AU46_RS03855	SM00487	DEAD-like helicases superfamily
AU46_RS03855	SM00490	helicase superfamily c-terminal domain
AU46_RS03875	SM00729	Elongator protein 3, MiaB family, Radical SAM
AU46_RS03880	SM00852	Probable molybdopterin binding domain
AU46_RS03925	SM00155	Phospholipase D. Active site motifs.
AU46_RS03950	SM00382	ATPases associated with a variety of cellular activities
AU46_RS03965	SM00487	DEAD-like helicases superfamily
AU46_RS03965	SM00490	helicase superfamily c-terminal domain
AU46_RS03970	SM00487	DEAD-like helicases superfamily
AU46_RS03970	SM00488	AU46_RS03970
AU46_RS03970	SM00491	AU46_RS03970
AU46_RS04005	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04015	SM00062	Bacterial periplasmic substrate-binding proteins
AU46_RS04015	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AU46_RS04040	SM00529	Helix-turn-helix diphteria tox regulatory element
AU46_RS04055	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04095	SM00852	Probable molybdopterin binding domain
AU46_RS04105	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04125	SM00729	Elongator protein 3, MiaB family, Radical SAM
AU46_RS04140	SM00893	Electron transfer flavoprotein domain
AU46_RS04145	SM00893	Electron transfer flavoprotein domain
AU46_RS04190	SM00936	Penicillin-binding protein 5, C-terminal domain 
AU46_RS04195	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS04195	SM01134	AU46_RS04195
AU46_RS04200	SM00014	Acid phosphatase homologues
AU46_RS04265	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04305	SM00062	Bacterial periplasmic substrate-binding proteins
AU46_RS04305	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AU46_RS04320	SM00062	Bacterial periplasmic substrate-binding proteins
AU46_RS04320	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AU46_RS04325	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04340	SM00644	AU46_RS04340
AU46_RS04395	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04400	SM00357	Cold shock protein domain
AU46_RS04410	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04410	SM01086	C-terminal, D2-small domain, of ClpB protein
AU46_RS04450	SM00316	Ribosomal protein S1-like RNA-binding domain
AU46_RS04465	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04470	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04480	SM00344	helix_turn_helix ASNC type
AU46_RS04485	SM00843	AU46_RS04485
AU46_RS04495	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04505	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS04585	SM00316	Ribosomal protein S1-like RNA-binding domain
AU46_RS04590	SM00411	bacterial (prokaryotic) histone like domain
AU46_RS04595	SM00849	Metallo-beta-lactamase superfamily
AU46_RS04600	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04665	SM00849	Metallo-beta-lactamase superfamily
AU46_RS04685	SM00344	helix_turn_helix ASNC type
AU46_RS04780	SM00981	AU46_RS04780
AU46_RS04785	SM00382	ATPases associated with a variety of cellular activities
AU46_RS04855	SM00851	MGS-like domain
AU46_RS04865	SM00881	CoA binding domain
AU46_RS04870	SM00992	Hemimethylated DNA-binding protein YccV like
AU46_RS04875	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AU46_RS04885	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS04955	SM00387	Histidine kinase-like ATPases
AU46_RS04955	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS04960	SM00448	cheY-homologous receiver domain
AU46_RS04960	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS04965	SM00095	Transthyretin
AU46_RS04970	SM00903	Flavin reductase like domain
AU46_RS04980	SM00347	helix_turn_helix multiple antibiotic resistance protein
AU46_RS05020	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS05025	SM00849	Metallo-beta-lactamase superfamily
AU46_RS05040	SM00271	DnaJ molecular chaperone homology domain
AU46_RS05180	SM00257	Lysin motif
AU46_RS05215	SM00671	Sel1-like repeats.
AU46_RS05220	SM00671	Sel1-like repeats.
AU46_RS05250	SM00357	Cold shock protein domain
AU46_RS05265	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AU46_RS05295	SM00267	diguanylate cyclase
AU46_RS05315	SM00421	helix_turn_helix, Lux Regulon
AU46_RS05365	SM00382	ATPases associated with a variety of cellular activities
AU46_RS05410	SM00642	Alpha-amylase domain
AU46_RS05455	SM00062	Bacterial periplasmic substrate-binding proteins
AU46_RS05455	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AU46_RS05470	SM00382	ATPases associated with a variety of cellular activities
AU46_RS05475	SM00421	helix_turn_helix, Lux Regulon
AU46_RS05490	SM00421	helix_turn_helix, Lux Regulon
AU46_RS05490	SM00448	cheY-homologous receiver domain
AU46_RS05495	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AU46_RS05495	SM00465	GIY-YIG type nucleases (URI domain)
AU46_RS05620	SM00073	Histidine Phosphotransfer domain
AU46_RS05620	SM00260	Two component signalling adaptor domain
AU46_RS05620	SM00387	Histidine kinase-like ATPases
AU46_RS05620	SM01231	AU46_RS05620
AU46_RS05625	SM00260	Two component signalling adaptor domain
AU46_RS05630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AU46_RS05630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS05630	SM00319	Homologues of the ligand binding domain of Tar
AU46_RS05635	SM00138	Methyltransferase, chemotaxis proteins 
AU46_RS05640	SM00448	cheY-homologous receiver domain
AU46_RS05645	SM00448	cheY-homologous receiver domain
AU46_RS05680	SM00836	DALR anticodon binding domain
AU46_RS05680	SM01016	Arginyl tRNA synthetase N terminal dom
AU46_RS05750	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AU46_RS05755	SM00382	ATPases associated with a variety of cellular activities
AU46_RS05765	SM00382	ATPases associated with a variety of cellular activities
AU46_RS05775	SM00257	Lysin motif
AU46_RS05835	SM00479	AU46_RS05835
AU46_RS05880	SM00849	Metallo-beta-lactamase superfamily
AU46_RS06045	SM00506	Appr-1"-p processing enzyme
AU46_RS06160	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AU46_RS06165	SM00945	ProQ/FINO family
AU46_RS06170	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AU46_RS06170	SM00245	tail specific protease
AU46_RS06185	SM00346	helix_turn_helix isocitrate lyase regulation
AU46_RS06210	SM00357	Cold shock protein domain
AU46_RS06255	SM01091	Transporter associated domain
AU46_RS06260	SM00052	Putative diguanylate phosphodiesterase
AU46_RS06290	SM00487	DEAD-like helicases superfamily
AU46_RS06290	SM00491	AU46_RS06290
AU46_RS06310	SM00341	Helicase and RNase D C-terminal
AU46_RS06310	SM00474	3'-5' exonuclease
AU46_RS06370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS06385	SM01005	Alanine racemase, C-terminal domain
AU46_RS06390	SM01091	Transporter associated domain
AU46_RS06420	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AU46_RS06500	SM01400	AU46_RS06500
AU46_RS06520	SM00937	AU46_RS06520
AU46_RS06565	SM00421	helix_turn_helix, Lux Regulon
AU46_RS06565	SM00448	cheY-homologous receiver domain
AU46_RS06570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS06570	SM00387	Histidine kinase-like ATPases
AU46_RS06580	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS06600	SM00671	Sel1-like repeats.
AU46_RS06630	SM00448	cheY-homologous receiver domain
AU46_RS06640	SM00528	Domain in histone-like proteins of HNS family
AU46_RS06675	SM00382	ATPases associated with a variety of cellular activities
AU46_RS06680	SM00382	ATPases associated with a variety of cellular activities
AU46_RS06695	SM00155	Phospholipase D. Active site motifs.
AU46_RS06780	SM00481	DNA polymerase alpha chain like domain
AU46_RS06790	SM00363	S4 RNA-binding domain
AU46_RS06800	SM00822	AU46_RS06800
AU46_RS06815	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AU46_RS06815	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AU46_RS06815	SM00493	AU46_RS06815
AU46_RS06840	SM00014	Acid phosphatase homologues
AU46_RS06850	SM00028	Tetratricopeptide repeats
AU46_RS06855	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AU46_RS06870	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS06870	SM01134	AU46_RS06870
AU46_RS06880	SM00052	Putative diguanylate phosphodiesterase
AU46_RS06880	SM00091	PAS domain
AU46_RS06880	SM00267	diguanylate cyclase
AU46_RS06885	SM00357	Cold shock protein domain
AU46_RS06885	SM00955	AU46_RS06885
AU46_RS06920	SM00382	ATPases associated with a variety of cellular activities
AU46_RS06925	SM00382	ATPases associated with a variety of cellular activities
AU46_RS06945	SM00382	ATPases associated with a variety of cellular activities
AU46_RS06970	SM00450	Rhodanese Homology Domain
AU46_RS06985	SM00091	PAS domain
AU46_RS06985	SM00382	ATPases associated with a variety of cellular activities
AU46_RS06995	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS07025	SM00822	AU46_RS07025
AU46_RS07045	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS07045	SM00871	Bacterial transcription activator, effector binding domain
AU46_RS07080	SM00873	B3/4 domain
AU46_RS07085	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS07105	SM00100	Cyclic nucleotide-monophosphate binding domain
AU46_RS07105	SM00419	helix_turn_helix, cAMP Regulatory protein
AU46_RS07115	SM00463	Small MutS-related domain
AU46_RS07120	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AU46_RS07130	SM00487	DEAD-like helicases superfamily
AU46_RS07130	SM00490	helicase superfamily c-terminal domain
AU46_RS07170	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS07255	SM00890	Domain of unknown function
AU46_RS07305	SM00382	ATPases associated with a variety of cellular activities
AU46_RS07305	SM00487	DEAD-like helicases superfamily
AU46_RS07305	SM00490	helicase superfamily c-terminal domain
AU46_RS07305	SM00847	Helicase associated domain (HA2)  Add an annotation
AU46_RS07340	SM00382	ATPases associated with a variety of cellular activities
AU46_RS07350	SM00062	Bacterial periplasmic substrate-binding proteins
AU46_RS07375	SM00829	Enoylreductase
AU46_RS07380	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AU46_RS07380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS07380	SM00319	Homologues of the ligand binding domain of Tar
AU46_RS07390	SM01150	AU46_RS07390
AU46_RS07405	SM00867	YceI-like domain 
AU46_RS07410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS07410	SM00895	AU46_RS07410
AU46_RS07430	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS07440	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS07440	SM01134	AU46_RS07440
AU46_RS07505	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS07540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS07585	SM00829	Enoylreductase
AU46_RS07590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS07590	SM00895	AU46_RS07590
AU46_RS07645	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS07680	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS07700	SM00829	Enoylreductase
AU46_RS07705	SM00919	Malic enzyme, NAD binding domain
AU46_RS07705	SM01274	AU46_RS07705
AU46_RS07735	SM00642	Alpha-amylase domain
AU46_RS07740	SM00642	Alpha-amylase domain
AU46_RS07745	SM00642	Alpha-amylase domain
AU46_RS07760	SM00354	helix_turn _helix lactose operon repressor
AU46_RS07790	SM00347	helix_turn_helix multiple antibiotic resistance protein
AU46_RS07820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS07820	SM00895	AU46_RS07820
AU46_RS07920	SM00347	helix_turn_helix multiple antibiotic resistance protein
AU46_RS07925	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS07975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS07975	SM00895	AU46_RS07975
AU46_RS08000	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS08030	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS08035	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS08070	SM00116	Domain in cystathionine beta-synthase and other proteins.
AU46_RS08070	SM00382	ATPases associated with a variety of cellular activities
AU46_RS08130	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AU46_RS08130	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AU46_RS08150	SM00448	cheY-homologous receiver domain
AU46_RS08150	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS08170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS08170	SM00387	Histidine kinase-like ATPases
AU46_RS08170	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS08250	SM00900	AU46_RS08250
AU46_RS08260	SM00478	endonuclease III
AU46_RS08260	SM00525	AU46_RS08260
AU46_RS08280	SM00363	S4 RNA-binding domain
AU46_RS08305	SM00347	helix_turn_helix multiple antibiotic resistance protein
AU46_RS08355	SM00479	AU46_RS08355
AU46_RS08375	SM00354	helix_turn _helix lactose operon repressor
AU46_RS08450	SM00382	ATPases associated with a variety of cellular activities
AU46_RS08510	SM00028	Tetratricopeptide repeats
AU46_RS08565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS08565	SM00387	Histidine kinase-like ATPases
AU46_RS08565	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS08565	SM00448	cheY-homologous receiver domain
AU46_RS08570	SM00421	helix_turn_helix, Lux Regulon
AU46_RS08570	SM00448	cheY-homologous receiver domain
AU46_RS08575	SM00422	helix_turn_helix, mercury resistance
AU46_RS08590	SM00421	helix_turn_helix, Lux Regulon
AU46_RS08590	SM00448	cheY-homologous receiver domain
AU46_RS08595	SM00387	Histidine kinase-like ATPases
AU46_RS08595	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS08610	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS08615	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS08650	SM00257	Lysin motif
AU46_RS08670	SM00382	ATPases associated with a variety of cellular activities
AU46_RS08735	SM00882	Coenzyme A transferase
AU46_RS08745	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS08750	SM00893	Electron transfer flavoprotein domain
AU46_RS08810	SM00382	ATPases associated with a variety of cellular activities
AU46_RS08825	SM00411	bacterial (prokaryotic) histone like domain
AU46_RS08830	SM00873	B3/4 domain
AU46_RS08830	SM00874	tRNA synthetase B5 domain
AU46_RS08830	SM00896	Ferredoxin-fold anticodon binding domain
AU46_RS08855	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AU46_RS08870	SM00477	DNA/RNA non-specific endonuclease
AU46_RS08870	SM00892	DNA/RNA non-specific endonuclease
AU46_RS08930	SM01060	AU46_RS08930
AU46_RS08945	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS08975	SM00465	GIY-YIG type nucleases (URI domain)
AU46_RS09025	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AU46_RS09030	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AU46_RS09030	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AU46_RS09030	SM00493	AU46_RS09030
AU46_RS09050	SM00870	AU46_RS09050
AU46_RS09065	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS09065	SM01134	AU46_RS09065
AU46_RS09085	SM00829	Enoylreductase
AU46_RS09095	SM00829	Enoylreductase
AU46_RS09110	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AU46_RS09135	SM00763	PrkA AAA domain
AU46_RS09145	SM00267	diguanylate cyclase
AU46_RS09165	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS09220	SM00830	Chorismate mutase type II
AU46_RS09230	SM00422	helix_turn_helix, mercury resistance
AU46_RS09235	SM00421	helix_turn_helix, Lux Regulon
AU46_RS09265	SM00382	ATPases associated with a variety of cellular activities
AU46_RS09270	SM00382	ATPases associated with a variety of cellular activities
AU46_RS09370	SM00357	Cold shock protein domain
AU46_RS09375	SM00458	Ricin-type beta-trefoil
AU46_RS09400	SM01329	AU46_RS09400
AU46_RS09435	SM00448	cheY-homologous receiver domain
AU46_RS09435	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS09440	SM00387	Histidine kinase-like ATPases
AU46_RS09445	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AU46_RS09460	SM00382	ATPases associated with a variety of cellular activities
AU46_RS09500	SM00382	ATPases associated with a variety of cellular activities
AU46_RS09510	SM00487	DEAD-like helicases superfamily
AU46_RS09510	SM00490	helicase superfamily c-terminal domain
AU46_RS09510	SM00982	AU46_RS09510
AU46_RS09510	SM01058	CarD-like/TRCF domain
AU46_RS09515	SM00257	Lysin motif
AU46_RS09605	SM00825	Beta-ketoacyl synthase
AU46_RS09615	SM00822	AU46_RS09615
AU46_RS09620	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AU46_RS09660	SM00363	S4 RNA-binding domain
AU46_RS09670	SM00316	Ribosomal protein S1-like RNA-binding domain
AU46_RS09685	SM00047	Lysozyme subfamily 2
AU46_RS09730	SM00858	AU46_RS09730
AU46_RS09810	SM00867	YceI-like domain 
AU46_RS09815	SM00450	Rhodanese Homology Domain
AU46_RS09855	SM00155	Phospholipase D. Active site motifs.
AU46_RS09860	SM00506	Appr-1"-p processing enzyme
AU46_RS09885	SM00421	helix_turn_helix, Lux Regulon
AU46_RS09915	SM00481	DNA polymerase alpha chain like domain
AU46_RS10000	SM00255	Toll - interleukin 1 - resistance
AU46_RS10085	SM00528	Domain in histone-like proteins of HNS family
AU46_RS10130	SM00671	Sel1-like repeats.
AU46_RS10215	SM00382	ATPases associated with a variety of cellular activities
AU46_RS10295	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS10305	SM00877	AU46_RS10305
AU46_RS10310	SM00877	AU46_RS10310
AU46_RS10340	SM00877	AU46_RS10340
AU46_RS10345	SM00877	AU46_RS10345
AU46_RS10385	SM00877	AU46_RS10385
AU46_RS10390	SM00877	AU46_RS10390
AU46_RS10420	SM00871	Bacterial transcription activator, effector binding domain
AU46_RS10425	SM00936	Penicillin-binding protein 5, C-terminal domain 
AU46_RS10440	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS10450	SM00479	AU46_RS10450
AU46_RS10515	SM00984	UDP binding domain
AU46_RS10520	SM01350	AU46_RS10520
AU46_RS10705	SM00226	Low molecular weight phosphatase family
AU46_RS10715	SM01091	Transporter associated domain
AU46_RS10735	SM00052	Putative diguanylate phosphodiesterase
AU46_RS10735	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AU46_RS10735	SM00091	PAS domain
AU46_RS10735	SM00267	diguanylate cyclase
AU46_RS10740	SM00478	endonuclease III
AU46_RS10740	SM01009	AlkA N-terminal domain
AU46_RS10770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS10770	SM00387	Histidine kinase-like ATPases
AU46_RS10770	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS10775	SM00448	cheY-homologous receiver domain
AU46_RS10775	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS10815	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AU46_RS10820	SM01133	AU46_RS10820
AU46_RS10840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS10840	SM00866	AU46_RS10840
AU46_RS10910	SM00448	cheY-homologous receiver domain
AU46_RS10910	SM00850	LytTr DNA-binding domain
AU46_RS10915	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AU46_RS10915	SM00387	Histidine kinase-like ATPases
AU46_RS10920	SM00422	helix_turn_helix, mercury resistance
AU46_RS10935	SM00382	ATPases associated with a variety of cellular activities
AU46_RS10950	SM01217	AU46_RS10950
AU46_RS11060	SM00382	ATPases associated with a variety of cellular activities
AU46_RS11070	SM00354	helix_turn _helix lactose operon repressor
AU46_RS11090	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS11130	SM00518	AP endonuclease family 2
AU46_RS11170	SM00841	Elongation factor P, C-terminal
AU46_RS11170	SM01185	AU46_RS11170
AU46_RS11180	SM00014	Acid phosphatase homologues
AU46_RS11190	SM00052	Putative diguanylate phosphodiesterase
AU46_RS11210	SM00382	ATPases associated with a variety of cellular activities
AU46_RS11230	SM00363	S4 RNA-binding domain
AU46_RS11235	SM00487	DEAD-like helicases superfamily
AU46_RS11235	SM00490	helicase superfamily c-terminal domain
AU46_RS11270	SM00364	Leucine-rich repeats, bacterial type
AU46_RS11270	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AU46_RS11300	SM00421	helix_turn_helix, Lux Regulon
AU46_RS11300	SM00448	cheY-homologous receiver domain
AU46_RS11340	SM00382	ATPases associated with a variety of cellular activities
AU46_RS11365	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS11385	SM00382	ATPases associated with a variety of cellular activities
AU46_RS11395	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS11410	SM00387	Histidine kinase-like ATPases
AU46_RS11415	SM00421	helix_turn_helix, Lux Regulon
AU46_RS11415	SM00448	cheY-homologous receiver domain
AU46_RS11420	SM00387	Histidine kinase-like ATPases
AU46_RS11420	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS11420	SM00448	cheY-homologous receiver domain
AU46_RS11425	SM00434	DNA Topoisomerase IV
AU46_RS11430	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS11440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS11440	SM00895	AU46_RS11440
AU46_RS11520	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS11525	SM00346	helix_turn_helix isocitrate lyase regulation
AU46_RS11530	SM00852	Probable molybdopterin binding domain
AU46_RS11595	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS11635	SM00260	Two component signalling adaptor domain
AU46_RS11635	SM00448	cheY-homologous receiver domain
AU46_RS11640	SM00327	von Willebrand factor (vWF) type A domain
AU46_RS11680	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS11680	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AU46_RS11685	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AU46_RS11730	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AU46_RS11770	SM00861	Transketolase, pyrimidine binding domain
AU46_RS11800	SM00354	helix_turn _helix lactose operon repressor
AU46_RS11830	SM00382	ATPases associated with a variety of cellular activities
AU46_RS11845	SM00062	Bacterial periplasmic substrate-binding proteins
AU46_RS11850	SM00062	Bacterial periplasmic substrate-binding proteins
AU46_RS11880	SM00382	ATPases associated with a variety of cellular activities
AU46_RS11920	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AU46_RS11945	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS11965	SM00825	Beta-ketoacyl synthase
AU46_RS12005	SM00463	Small MutS-related domain
AU46_RS12075	SM00448	cheY-homologous receiver domain
AU46_RS12080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS12080	SM00387	Histidine kinase-like ATPases
AU46_RS12080	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS12150	SM00052	Putative diguanylate phosphodiesterase
AU46_RS12150	SM00267	diguanylate cyclase
AU46_RS12240	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AU46_RS12240	SM00292	breast cancer carboxy-terminal domain
AU46_RS12240	SM00532	Ligase N family
AU46_RS12245	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AU46_RS12290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS12305	SM00671	Sel1-like repeats.
AU46_RS12315	SM00382	ATPases associated with a variety of cellular activities
AU46_RS12335	SM00822	AU46_RS12335
AU46_RS12360	SM00646	AU46_RS12360
AU46_RS12375	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS12380	SM00877	AU46_RS12380
AU46_RS12385	SM00877	AU46_RS12385
AU46_RS12430	SM00877	AU46_RS12430
AU46_RS12455	SM00877	AU46_RS12455
AU46_RS12460	SM00919	Malic enzyme, NAD binding domain
AU46_RS12460	SM01274	AU46_RS12460
AU46_RS12470	SM00861	Transketolase, pyrimidine binding domain
AU46_RS12500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS12500	SM00387	Histidine kinase-like ATPases
AU46_RS12545	SM01130	AU46_RS12545
AU46_RS12625	SM00052	Putative diguanylate phosphodiesterase
AU46_RS12625	SM00267	diguanylate cyclase
AU46_RS12655	SM00116	Domain in cystathionine beta-synthase and other proteins.
AU46_RS12655	SM01240	AU46_RS12655
AU46_RS12665	SM00869	Autotransporter beta-domain
AU46_RS12700	SM00564	beta-propeller repeat
AU46_RS12720	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS12730	SM00562	AU46_RS12730
AU46_RS12750	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS12760	SM01359	AU46_RS12760
AU46_RS12760	SM01360	AU46_RS12760
AU46_RS12765	SM00450	Rhodanese Homology Domain
AU46_RS12800	SM00271	DnaJ molecular chaperone homology domain
AU46_RS12885	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS12905	SM00938	Nitrogen regulatory protein P-II
AU46_RS12910	SM00382	ATPases associated with a variety of cellular activities
AU46_RS12910	SM00448	cheY-homologous receiver domain
AU46_RS12920	SM00387	Histidine kinase-like ATPases
AU46_RS12920	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS12925	SM01211	AU46_RS12925
AU46_RS12935	SM00062	Bacterial periplasmic substrate-binding proteins
AU46_RS13005	SM00358	Double-stranded RNA binding motif
AU46_RS13005	SM00535	Ribonuclease III family
AU46_RS13050	SM00487	DEAD-like helicases superfamily
AU46_RS13050	SM00490	helicase superfamily c-terminal domain
AU46_RS13070	SM00986	Uracil DNA glycosylase superfamily
AU46_RS13070	SM00987	UreE urease accessory protein, C-terminal domain 
AU46_RS13075	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AU46_RS13085	SM01144	AU46_RS13085
AU46_RS13090	SM00881	CoA binding domain
AU46_RS13095	SM00155	Phospholipase D. Active site motifs.
AU46_RS13135	SM00382	ATPases associated with a variety of cellular activities
AU46_RS13135	SM01086	C-terminal, D2-small domain, of ClpB protein
AU46_RS13145	SM00363	S4 RNA-binding domain
AU46_RS13160	SM00830	Chorismate mutase type II
AU46_RS13170	SM00830	Chorismate mutase type II
AU46_RS13185	SM00267	diguanylate cyclase
AU46_RS13210	SM00382	ATPases associated with a variety of cellular activities
AU46_RS13210	SM00962	SRP54-type protein, GTPase domain
AU46_RS13210	SM00963	SRP54-type protein, helical bundle domain
AU46_RS13220	SM01091	Transporter associated domain
AU46_RS13275	SM00382	ATPases associated with a variety of cellular activities
AU46_RS13535	SM01321	AU46_RS13535
AU46_RS13545	SM00382	ATPases associated with a variety of cellular activities
AU46_RS13595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS13595	SM00387	Histidine kinase-like ATPases
AU46_RS13595	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS13600	SM00448	cheY-homologous receiver domain
AU46_RS13600	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS13650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS13650	SM00895	AU46_RS13650
AU46_RS13655	SM00257	Lysin motif
AU46_RS13655	SM00749	bacterial OsmY and nodulation domain
AU46_RS13665	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AU46_RS13670	SM00450	Rhodanese Homology Domain
AU46_RS13680	SM00528	Domain in histone-like proteins of HNS family
AU46_RS13700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS13735	SM00382	ATPases associated with a variety of cellular activities
AU46_RS13755	SM00347	helix_turn_helix multiple antibiotic resistance protein
AU46_RS13825	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AU46_RS13835	SM00382	ATPases associated with a variety of cellular activities
AU46_RS13880	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS13880	SM01134	AU46_RS13880
AU46_RS13890	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AU46_RS13890	SM00382	ATPases associated with a variety of cellular activities
AU46_RS13895	SM00849	Metallo-beta-lactamase superfamily
AU46_RS13990	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AU46_RS13990	SM00382	ATPases associated with a variety of cellular activities
AU46_RS14005	SM00382	ATPases associated with a variety of cellular activities
AU46_RS14030	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS14070	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS14075	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS14085	SM00194	Protein tyrosine phosphatase, catalytic domain
AU46_RS14085	SM00404	Protein tyrosine phosphatase, catalytic domain motif
AU46_RS14165	SM00382	ATPases associated with a variety of cellular activities
AU46_RS14190	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS14235	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AU46_RS14235	SM00534	ATPase domain of DNA mismatch repair MUTS family
AU46_RS14270	SM01007	Class II Aldolase and Adducin N-terminal domain
AU46_RS14285	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS14285	SM01134	AU46_RS14285
AU46_RS14290	SM00347	helix_turn_helix multiple antibiotic resistance protein
AU46_RS14315	SM00257	Lysin motif
AU46_RS14385	SM01101	AU46_RS14385
AU46_RS14410	SM00487	DEAD-like helicases superfamily
AU46_RS14440	SM00849	Metallo-beta-lactamase superfamily
AU46_RS14450	SM01192	AU46_RS14450
AU46_RS14450	SM01193	AU46_RS14450
AU46_RS14500	SM00954	Region found in RelA / SpoT proteins
AU46_RS14510	SM00073	Histidine Phosphotransfer domain
AU46_RS14510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS14510	SM00387	Histidine kinase-like ATPases
AU46_RS14510	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS14510	SM00448	cheY-homologous receiver domain
AU46_RS14520	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS14525	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS14575	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AU46_RS14575	SM00475	5'-3' exonuclease
AU46_RS14585	SM01007	Class II Aldolase and Adducin N-terminal domain
AU46_RS14610	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS14610	SM01134	AU46_RS14610
AU46_RS14655	SM00925	MltA specific insert domain
AU46_RS14670	SM00646	AU46_RS14670
AU46_RS14680	SM00382	ATPases associated with a variety of cellular activities
AU46_RS14735	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AU46_RS14750	SM00927	DNA mismatch repair enzyme MutH
AU46_RS14775	SM00563	Phosphate acyltransferases
AU46_RS14780	SM00354	helix_turn _helix lactose operon repressor
AU46_RS14785	SM00354	helix_turn _helix lactose operon repressor
AU46_RS14915	SM00257	Lysin motif
AU46_RS14930	SM00937	AU46_RS14930
AU46_RS14980	SM01022	AU46_RS14980
AU46_RS15020	SM01011	Aminopeptidase P, N-terminal domain
AU46_RS15080	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AU46_RS15100	SM00382	ATPases associated with a variety of cellular activities
AU46_RS15105	SM00382	ATPases associated with a variety of cellular activities
AU46_RS15110	SM00861	Transketolase, pyrimidine binding domain
AU46_RS15140	SM00829	Enoylreductase
AU46_RS15155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS15155	SM00895	AU46_RS15155
AU46_RS15190	SM00731	SprT homologues.
AU46_RS15215	SM00732	Likely ribonuclease with RNase H fold.
AU46_RS15220	SM00346	helix_turn_helix isocitrate lyase regulation
AU46_RS15225	SM00382	ATPases associated with a variety of cellular activities
AU46_RS15240	SM01152	AU46_RS15240
AU46_RS15250	SM00729	Elongator protein 3, MiaB family, Radical SAM
AU46_RS15260	SM00870	AU46_RS15260
AU46_RS15280	SM00478	endonuclease III
AU46_RS15280	SM00525	AU46_RS15280
AU46_RS15355	SM00421	helix_turn_helix, Lux Regulon
AU46_RS15425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AU46_RS15495	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AU46_RS15495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS15550	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS15580	SM00729	Elongator protein 3, MiaB family, Radical SAM
AU46_RS15605	SM00563	Phosphate acyltransferases
AU46_RS15610	SM00434	DNA Topoisomerase IV
AU46_RS15615	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS15615	SM00871	Bacterial transcription activator, effector binding domain
AU46_RS15625	SM00448	cheY-homologous receiver domain
AU46_RS15625	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS15630	SM00387	Histidine kinase-like ATPases
AU46_RS15630	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS15645	SM00387	Histidine kinase-like ATPases
AU46_RS15645	SM00433	TopoisomeraseII
AU46_RS15735	SM00244	prohibitin homologues
AU46_RS15750	SM01118	AU46_RS15750
AU46_RS15755	SM00287	Bacterial SH3 domain homologues
AU46_RS15760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AU46_RS15770	SM00905	Dihydroneopterin aldolase
AU46_RS15775	SM01207	AU46_RS15775
AU46_RS15795	SM00400	zinc finger
AU46_RS15795	SM00493	AU46_RS15795
AU46_RS15795	SM00766	DNA primase DnaG DnaB-binding
AU46_RS15825	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AU46_RS15825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS15830	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AU46_RS15830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AU46_RS15990	SM00858	AU46_RS15990
AU46_RS16020	SM00829	Enoylreductase
AU46_RS16025	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS16025	SM01134	AU46_RS16025
AU46_RS16050	SM00749	bacterial OsmY and nodulation domain
AU46_RS16055	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AU46_RS16070	SM00465	GIY-YIG type nucleases (URI domain)
AU46_RS16115	SM00487	DEAD-like helicases superfamily
AU46_RS16115	SM00490	helicase superfamily c-terminal domain
AU46_RS16120	SM00028	Tetratricopeptide repeats
AU46_RS16125	SM00316	Ribosomal protein S1-like RNA-binding domain
AU46_RS16125	SM00322	K homology RNA-binding domain
AU46_RS16130	SM01387	AU46_RS16130
AU46_RS16150	SM00316	Ribosomal protein S1-like RNA-binding domain
AU46_RS16150	SM00322	K homology RNA-binding domain
AU46_RS16195	SM00382	ATPases associated with a variety of cellular activities
AU46_RS16205	SM01103	AU46_RS16205
AU46_RS16285	SM00382	ATPases associated with a variety of cellular activities
AU46_RS16315	SM00382	ATPases associated with a variety of cellular activities
AU46_RS16360	SM00073	Histidine Phosphotransfer domain
AU46_RS16360	SM00091	PAS domain
AU46_RS16360	SM00387	Histidine kinase-like ATPases
AU46_RS16360	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS16360	SM00448	cheY-homologous receiver domain
AU46_RS16365	SM00729	Elongator protein 3, MiaB family, Radical SAM
AU46_RS16420	SM01130	AU46_RS16420
AU46_RS16425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS16425	SM00895	AU46_RS16425
AU46_RS16465	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AU46_RS16470	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AU46_RS16510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS16510	SM00895	AU46_RS16510
AU46_RS16515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS16575	SM00316	Ribosomal protein S1-like RNA-binding domain
AU46_RS16605	SM00052	Putative diguanylate phosphodiesterase
AU46_RS16605	SM00267	diguanylate cyclase
AU46_RS16610	SM00829	Enoylreductase
AU46_RS16630	SM00878	Biotin carboxylase C-terminal domain
AU46_RS16670	SM00052	Putative diguanylate phosphodiesterase
AU46_RS16670	SM00267	diguanylate cyclase
AU46_RS16795	SM00422	helix_turn_helix, mercury resistance
AU46_RS16810	SM00662	RNA polymerases D
AU46_RS16815	SM00363	S4 RNA-binding domain
AU46_RS16815	SM01390	AU46_RS16815
AU46_RS16880	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AU46_RS16885	SM01374	AU46_RS16885
AU46_RS16905	SM00322	K homology RNA-binding domain
AU46_RS16920	SM01382	AU46_RS16920
AU46_RS16920	SM01383	AU46_RS16920
AU46_RS16940	SM01403	AU46_RS16940
AU46_RS16965	SM00838	Elongation factor G C-terminus
AU46_RS16965	SM00889	Elongation factor G, domain IV
AU46_RS17030	SM00382	ATPases associated with a variety of cellular activities
AU46_RS17065	SM00100	Cyclic nucleotide-monophosphate binding domain
AU46_RS17065	SM00419	helix_turn_helix, cAMP Regulatory protein
AU46_RS17125	SM00869	Autotransporter beta-domain
AU46_RS17170	SM00965	Secretin and TonB N terminus short domain
AU46_RS17215	SM00363	S4 RNA-binding domain
AU46_RS17235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS17235	SM00387	Histidine kinase-like ATPases
AU46_RS17235	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS17240	SM00448	cheY-homologous receiver domain
AU46_RS17240	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS17250	SM00316	Ribosomal protein S1-like RNA-binding domain
AU46_RS17250	SM00732	Likely ribonuclease with RNase H fold.
AU46_RS17255	SM00899	AU46_RS17255
AU46_RS17305	SM00421	helix_turn_helix, Lux Regulon
AU46_RS17335	SM00382	ATPases associated with a variety of cellular activities
AU46_RS17340	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS17340	SM01134	AU46_RS17340
AU46_RS17350	SM00450	Rhodanese Homology Domain
AU46_RS17385	SM01130	AU46_RS17385
AU46_RS17390	SM00346	helix_turn_helix isocitrate lyase regulation
AU46_RS17410	SM00642	Alpha-amylase domain
AU46_RS17415	SM00642	Alpha-amylase domain
AU46_RS17420	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AU46_RS17435	SM00354	helix_turn _helix lactose operon repressor
AU46_RS17455	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS17490	SM00382	ATPases associated with a variety of cellular activities
AU46_RS17520	SM00382	ATPases associated with a variety of cellular activities
AU46_RS17525	SM00382	ATPases associated with a variety of cellular activities
AU46_RS17570	SM00382	ATPases associated with a variety of cellular activities
AU46_RS17575	SM00382	ATPases associated with a variety of cellular activities
AU46_RS17575	SM00962	SRP54-type protein, GTPase domain
AU46_RS17575	SM00963	SRP54-type protein, helical bundle domain
AU46_RS17605	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AU46_RS17605	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS17605	SM00319	Homologues of the ligand binding domain of Tar
AU46_RS17650	SM00382	ATPases associated with a variety of cellular activities
AU46_RS17695	SM00014	Acid phosphatase homologues
AU46_RS17710	SM00870	AU46_RS17710
AU46_RS17730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS17730	SM00866	AU46_RS17730
AU46_RS17750	SM00421	helix_turn_helix, Lux Regulon
AU46_RS17775	SM00052	Putative diguanylate phosphodiesterase
AU46_RS17795	SM00052	Putative diguanylate phosphodiesterase
AU46_RS17795	SM00267	diguanylate cyclase
AU46_RS17800	SM00028	Tetratricopeptide repeats
AU46_RS17860	SM00382	ATPases associated with a variety of cellular activities
AU46_RS17865	SM00382	ATPases associated with a variety of cellular activities
AU46_RS17895	SM00354	helix_turn _helix lactose operon repressor
AU46_RS17985	SM00357	Cold shock protein domain
AU46_RS18050	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS18055	SM00047	Lysozyme subfamily 2
AU46_RS18065	SM00642	Alpha-amylase domain
AU46_RS18080	SM00346	helix_turn_helix isocitrate lyase regulation
AU46_RS18120	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AU46_RS18130	SM01007	Class II Aldolase and Adducin N-terminal domain
AU46_RS18135	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS18210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS18210	SM00895	AU46_RS18210
AU46_RS18225	SM00354	helix_turn _helix lactose operon repressor
AU46_RS18230	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS18240	SM00971	Serine acetyltransferase, N-terminal
AU46_RS18260	SM00450	Rhodanese Homology Domain
AU46_RS18285	SM00829	Enoylreductase
AU46_RS18375	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AU46_RS18375	SM01232	AU46_RS18375
AU46_RS18430	SM00849	Metallo-beta-lactamase superfamily
AU46_RS18440	SM00532	Ligase N family
AU46_RS18445	SM00072	Guanylate kinase homologues.
AU46_RS18450	SM01409	AU46_RS18450
AU46_RS18455	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AU46_RS18455	SM00954	Region found in RelA / SpoT proteins
AU46_RS18465	SM00487	DEAD-like helicases superfamily
AU46_RS18465	SM00490	helicase superfamily c-terminal domain
AU46_RS18525	SM00869	Autotransporter beta-domain
AU46_RS18535	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS18550	SM00831	Cation transporter/ATPase, N-terminus
AU46_RS18600	SM00382	ATPases associated with a variety of cellular activities
AU46_RS18625	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS18645	SM00387	Histidine kinase-like ATPases
AU46_RS18650	SM00421	helix_turn_helix, Lux Regulon
AU46_RS18650	SM00448	cheY-homologous receiver domain
AU46_RS18670	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS18670	SM01134	AU46_RS18670
AU46_RS18800	SM00382	ATPases associated with a variety of cellular activities
AU46_RS18805	SM01235	AU46_RS18805
AU46_RS18825	SM00448	cheY-homologous receiver domain
AU46_RS18825	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS18835	SM00073	Histidine Phosphotransfer domain
AU46_RS18835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS18835	SM00387	Histidine kinase-like ATPases
AU46_RS18835	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS18835	SM00448	cheY-homologous receiver domain
AU46_RS18845	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS18860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS18860	SM00895	AU46_RS18860
AU46_RS18875	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AU46_RS18885	SM00387	Histidine kinase-like ATPases
AU46_RS18885	SM00433	TopoisomeraseII
AU46_RS18895	SM00480	DNA polymerase III beta subunit
AU46_RS18900	SM00382	ATPases associated with a variety of cellular activities
AU46_RS18900	SM00760	Bacterial dnaA protein helix-turn-helix domain
AU46_RS18915	SM01234	AU46_RS18915
AU46_RS18965	SM00382	ATPases associated with a variety of cellular activities
AU46_RS19020	SM00382	ATPases associated with a variety of cellular activities
AU46_RS19065	SM01228	AU46_RS19065
AU46_RS19075	SM00344	helix_turn_helix ASNC type
AU46_RS19085	SM00327	von Willebrand factor (vWF) type A domain
AU46_RS19090	SM00382	ATPases associated with a variety of cellular activities
AU46_RS19105	SM00382	ATPases associated with a variety of cellular activities
AU46_RS19125	SM00354	helix_turn _helix lactose operon repressor
AU46_RS19135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS19135	SM00895	AU46_RS19135
AU46_RS19180	SM00382	ATPases associated with a variety of cellular activities
AU46_RS19255	SM00487	DEAD-like helicases superfamily
AU46_RS19255	SM00490	helicase superfamily c-terminal domain
AU46_RS19265	SM00357	Cold shock protein domain
AU46_RS19265	SM00382	ATPases associated with a variety of cellular activities
AU46_RS19265	SM00959	Rho termination factor, N-terminal domain
AU46_RS19285	SM00984	UDP binding domain
AU46_RS19380	SM01219	AU46_RS19380
AU46_RS19455	SM00341	Helicase and RNase D C-terminal
AU46_RS19455	SM00487	DEAD-like helicases superfamily
AU46_RS19455	SM00490	helicase superfamily c-terminal domain
AU46_RS19455	SM00956	AU46_RS19455
AU46_RS19550	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AU46_RS19650	SM00563	Phosphate acyltransferases
AU46_RS19660	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AU46_RS19660	SM00474	3'-5' exonuclease
AU46_RS19660	SM00475	5'-3' exonuclease
AU46_RS19660	SM00482	DNA polymerase A domain
AU46_RS19680	SM00729	Elongator protein 3, MiaB family, Radical SAM
AU46_RS19685	SM00382	ATPases associated with a variety of cellular activities
AU46_RS19685	SM00448	cheY-homologous receiver domain
AU46_RS19690	SM00091	PAS domain
AU46_RS19690	SM00387	Histidine kinase-like ATPases
AU46_RS19690	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS19695	SM01230	AU46_RS19695
AU46_RS19715	SM00729	Elongator protein 3, MiaB family, Radical SAM
AU46_RS19765	SM01133	AU46_RS19765
AU46_RS19780	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS19780	SM01134	AU46_RS19780
AU46_RS19805	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS19825	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS19850	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS19885	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS19900	SM01007	Class II Aldolase and Adducin N-terminal domain
AU46_RS19915	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS19920	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS19970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS19970	SM00387	Histidine kinase-like ATPases
AU46_RS19970	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS19975	SM00448	cheY-homologous receiver domain
AU46_RS19975	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS20020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS20020	SM00866	AU46_RS20020
AU46_RS20045	SM00382	ATPases associated with a variety of cellular activities
AU46_RS20065	SM01133	AU46_RS20065
AU46_RS20130	SM00382	ATPases associated with a variety of cellular activities
AU46_RS20130	SM01086	C-terminal, D2-small domain, of ClpB protein
AU46_RS20145	SM00354	helix_turn _helix lactose operon repressor
AU46_RS20150	SM00487	DEAD-like helicases superfamily
AU46_RS20150	SM00490	helicase superfamily c-terminal domain
AU46_RS20210	SM01005	Alanine racemase, C-terminal domain
AU46_RS20215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS20280	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS20300	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AU46_RS20425	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AU46_RS20425	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AU46_RS20430	SM00649	Ribosomal protein L11/L12
AU46_RS20455	SM00663	RNA polymerase I subunit A N-terminus
AU46_RS20480	SM00876	Biotin and Thiamin Synthesis associated domain
AU46_RS20535	SM00411	bacterial (prokaryotic) histone like domain
AU46_RS20550	SM00387	Histidine kinase-like ATPases
AU46_RS20550	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS20555	SM00382	ATPases associated with a variety of cellular activities
AU46_RS20555	SM00448	cheY-homologous receiver domain
AU46_RS20560	SM01209	AU46_RS20560
AU46_RS20560	SM01210	AU46_RS20560
AU46_RS20565	SM00798	AICARFT/IMPCHase bienzyme
AU46_RS20565	SM00851	MGS-like domain
AU46_RS20615	SM01022	AU46_RS20615
AU46_RS20620	SM00346	helix_turn_helix isocitrate lyase regulation
AU46_RS20625	SM01018	B12 binding domain
AU46_RS20650	SM00363	S4 RNA-binding domain
AU46_RS20660	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS20660	SM01134	AU46_RS20660
AU46_RS20750	SM00382	ATPases associated with a variety of cellular activities
AU46_RS20775	SM00563	Phosphate acyltransferases
AU46_RS20825	SM00829	Enoylreductase
AU46_RS20830	SM00382	ATPases associated with a variety of cellular activities
AU46_RS20835	SM01005	Alanine racemase, C-terminal domain
AU46_RS20910	SM00382	ATPases associated with a variety of cellular activities
AU46_RS20920	SM00052	Putative diguanylate phosphodiesterase
AU46_RS20925	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS20930	SM00422	helix_turn_helix, mercury resistance
AU46_RS21015	SM00028	Tetratricopeptide repeats
AU46_RS21025	SM00671	Sel1-like repeats.
AU46_RS21035	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AU46_RS21065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS21065	SM00387	Histidine kinase-like ATPases
AU46_RS21065	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS21070	SM00448	cheY-homologous receiver domain
AU46_RS21070	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS21085	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS21100	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS21130	SM00448	cheY-homologous receiver domain
AU46_RS21135	SM00091	PAS domain
AU46_RS21135	SM00387	Histidine kinase-like ATPases
AU46_RS21175	SM00421	helix_turn_helix, Lux Regulon
AU46_RS21180	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS21200	SM00014	Acid phosphatase homologues
AU46_RS21250	SM00883	Chaperonin 10 Kd subunit
AU46_RS21275	SM00841	Elongation factor P, C-terminal
AU46_RS21275	SM01185	AU46_RS21275
AU46_RS21290	SM00421	helix_turn_helix, Lux Regulon
AU46_RS21355	SM00479	AU46_RS21355
AU46_RS21360	SM00062	Bacterial periplasmic substrate-binding proteins
AU46_RS21360	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AU46_RS21395	SM00646	AU46_RS21395
AU46_RS21400	SM00853	MutL C terminal dimerisation domain
AU46_RS21400	SM01340	AU46_RS21400
AU46_RS21420	SM00244	prohibitin homologues
AU46_RS21425	SM00244	prohibitin homologues
AU46_RS21435	SM00788	Adenylosuccinate synthetase
AU46_RS21445	SM00316	Ribosomal protein S1-like RNA-binding domain
AU46_RS21445	SM00357	Cold shock protein domain
AU46_RS21445	SM00955	AU46_RS21445
AU46_RS21450	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AU46_RS21510	SM00420	helix_turn_helix, Deoxyribose operon repressor
AU46_RS21510	SM01134	AU46_RS21510
AU46_RS21535	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AU46_RS21545	SM01007	Class II Aldolase and Adducin N-terminal domain
AU46_RS21650	SM01091	Transporter associated domain
AU46_RS21785	SM00642	Alpha-amylase domain
AU46_RS21795	SM00354	helix_turn _helix lactose operon repressor
AU46_RS21800	SM00831	Cation transporter/ATPase, N-terminus
AU46_RS21925	SM00354	helix_turn _helix lactose operon repressor
AU46_RS21950	SM00829	Enoylreductase
AU46_RS22005	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS22015	SM00421	helix_turn_helix, Lux Regulon
AU46_RS22090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AU46_RS22090	SM00895	AU46_RS22090
AU46_RS22180	SM00487	DEAD-like helicases superfamily
AU46_RS22240	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AU46_RS22255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AU46_RS22255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS22255	SM00319	Homologues of the ligand binding domain of Tar
AU46_RS22260	SM00382	ATPases associated with a variety of cellular activities
AU46_RS22305	SM00382	ATPases associated with a variety of cellular activities
AU46_RS22325	SM00421	helix_turn_helix, Lux Regulon
AU46_RS22330	SM00421	helix_turn_helix, Lux Regulon
AU46_RS22345	SM00267	diguanylate cyclase
AU46_RS22395	SM00749	bacterial OsmY and nodulation domain
AU46_RS22425	SM01133	AU46_RS22425
AU46_RS22430	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AU46_RS22465	SM00382	ATPases associated with a variety of cellular activities
AU46_RS22470	SM00530	Helix-turn-helix XRE-family like proteins 
AU46_RS22475	SM00382	ATPases associated with a variety of cellular activities
AU46_RS22495	SM00855	Phosphoglycerate mutase family
AU46_RS22500	SM00342	helix_turn_helix, arabinose operon control protein
AU46_RS22500	SM00871	Bacterial transcription activator, effector binding domain
AU46_RS22510	SM00448	cheY-homologous receiver domain
AU46_RS22510	SM00862	Transcriptional regulatory protein, C terminal
AU46_RS22515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AU46_RS22515	SM00387	Histidine kinase-like ATPases
AU46_RS22515	SM00388	His Kinase A (phosphoacceptor) domain
AU46_RS22560	SM00448	cheY-homologous receiver domain
AU46_RS22560	SM00862	Transcriptional regulatory protein, C terminal
