locus-tag class description APS46_RS00005 PF08254 Threonine leader peptide APS46_RS00010 PF00696 Amino acid kinase family APS46_RS00010 PF01842 ACT domain APS46_RS00010 PF13840 ACT domain APS46_RS00010 PF00742 Homoserine dehydrogenase APS46_RS00010 PF03447 Homoserine dehydrogenase, NAD binding domain APS46_RS00015 PF08544 GHMP kinases C terminal APS46_RS00015 PF00288 GHMP kinases N terminal domain APS46_RS00020 PF00291 Pyridoxal-phosphate dependent enzyme APS46_RS00020 PF14821 Threonine synthase N terminus APS46_RS00025 PF03883 Peroxide stress protein YaaA APS46_RS00030 PF01235 Sodium:alanine symporter family APS46_RS00035 PF00923 Transaldolase/Fructose-6-phosphate aldolase APS46_RS00040 PF00994 Probable molybdopterin binding domain APS46_RS00045 PF01184 GPR1/FUN34/yaaH family APS46_RS00050 PF03981 Ubiquinol-cytochrome C chaperone APS46_RS00050 PF13099 Domain of unknown function (DUF3944) APS46_RS00055 PF10807 Protein of unknown function (DUF2541) APS46_RS00060 PF00012 Hsp70 protein APS46_RS00065 PF00226 DnaJ domain APS46_RS00065 PF01556 DnaJ C terminal domain APS46_RS00065 PF00684 DnaJ central domain APS46_RS00070 PF03466 LysR substrate binding domain APS46_RS00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS00090 PF00704 Glycosyl hydrolases family 18 APS46_RS00105 PF00419 Fimbrial protein APS46_RS00110 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS00110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS00115 PF13953 PapC C-terminal domain APS46_RS00115 PF00577 Outer membrane usher protein APS46_RS00115 PF13954 PapC N-terminal domain APS46_RS00120 PF00419 Fimbrial protein APS46_RS00125 PF00419 Fimbrial protein APS46_RS00130 PF16970 Type-1 fimbrial protein, A APS46_RS00135 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS00135 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS00170 PF16385 Domain of unknown function APS46_RS00170 PF00884 Sulfatase APS46_RS00175 PF13186 Iron-sulfur cluster-binding domain APS46_RS00175 PF04055 Radical SAM superfamily APS46_RS00190 PF06965 Na+/H+ antiporter 1 APS46_RS00195 PF03466 LysR substrate binding domain APS46_RS00195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS00200 PF01055 Glycosyl hydrolases family 31 APS46_RS00210 PF01649 Ribosomal protein S20 APS46_RS00215 PF10837 Protein of unknown function (DUF2575) APS46_RS00220 PF01687 Riboflavin kinase APS46_RS00220 PF06574 FAD synthetase APS46_RS00225 PF08264 Anticodon-binding domain of tRNA APS46_RS00225 PF06827 Zinc finger found in FPG and IleRS APS46_RS00225 PF00133 tRNA synthetases class I (I, L, M and V) APS46_RS00230 PF01252 Signal peptidase (SPase) II APS46_RS00235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS46_RS00240 PF02401 LytB protein APS46_RS00250 PF01156 Inosine-uridine preferring nucleoside hydrolase APS46_RS00255 PF12431 Transcriptional regulator APS46_RS00255 PF00072 Response regulator receiver domain APS46_RS00260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS00260 PF17203 Single cache domain 3 APS46_RS00265 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit APS46_RS00270 PF00682 HMGL-like APS46_RS00270 PF02436 Conserved carboxylase domain APS46_RS00270 PF00364 Biotin-requiring enzyme APS46_RS00275 PF04277 Oxaloacetate decarboxylase, gamma chain APS46_RS00280 PF03390 2-hydroxycarboxylate transporter family APS46_RS00285 PF00583 Acetyltransferase (GNAT) family APS46_RS00285 PF08218 Citrate lyase ligase C-terminal domain APS46_RS00290 PF06857 Malonate decarboxylase delta subunit (MdcD) APS46_RS00295 PF03328 HpcH/HpaI aldolase/citrate lyase family APS46_RS00300 PF04223 Citrate lyase, alpha subunit (CitF) APS46_RS00305 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase APS46_RS00310 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase APS46_RS00315 PF05173 Dihydrodipicolinate reductase, C-terminus APS46_RS00315 PF01113 Dihydrodipicolinate reductase, N-terminus APS46_RS00320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APS46_RS00320 PF00117 Glutamine amidotransferase class-I APS46_RS00325 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APS46_RS00325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS46_RS00325 PF02142 MGS-like domain APS46_RS00330 PF07180 CaiF/GrlA transcriptional regulator APS46_RS00335 PF00132 Bacterial transferase hexapeptide (six repeats) APS46_RS00340 PF00378 Enoyl-CoA hydratase/isomerase APS46_RS00345 PF13193 AMP-binding enzyme C-terminal domain APS46_RS00345 PF00501 AMP-binding enzyme APS46_RS00350 PF02515 CoA-transferase family III APS46_RS00355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS46_RS00355 PF02770 Acyl-CoA dehydrogenase, middle domain APS46_RS00355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS46_RS00360 PF02028 BCCT, betaine/carnitine/choline family transporter APS46_RS00370 PF01012 Electron transfer flavoprotein domain APS46_RS00375 PF01012 Electron transfer flavoprotein domain APS46_RS00375 PF00766 Electron transfer flavoprotein FAD-binding domain APS46_RS00380 PF01494 FAD binding domain APS46_RS00390 PF00083 Sugar (and other) transporter APS46_RS00395 PF06004 Bacterial protein of unknown function (DUF903) APS46_RS00415 PF00884 Sulfatase APS46_RS00420 PF02525 Flavodoxin-like fold APS46_RS00425 PF02254 TrkA-N domain APS46_RS00425 PF00999 Sodium/hydrogen exchanger family APS46_RS00430 PF00186 Dihydrofolate reductase APS46_RS00435 PF00149 Calcineurin-like phosphoesterase APS46_RS00440 PF04379 ApaG domain APS46_RS00445 PF00398 Ribosomal RNA adenine dimethylase APS46_RS00450 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APS46_RS00455 PF09312 SurA N-terminal domain APS46_RS00455 PF00639 PPIC-type PPIASE domain APS46_RS00460 PF04453 LPS transport system D APS46_RS00460 PF03968 OstA-like protein APS46_RS00465 PF00226 DnaJ domain APS46_RS00465 PF05099 Tellurite resistance protein TerB APS46_RS00470 PF00849 RNA pseudouridylate synthase APS46_RS00475 PF18339 RapA N-terminal Tudor like domain 1 APS46_RS00475 PF18337 RapA N-terminal Tudor like domain APS46_RS00475 PF00271 Helicase conserved C-terminal domain APS46_RS00475 PF12137 RNA polymerase recycling family C-terminal APS46_RS00475 PF00176 SNF2 family N-terminal domain APS46_RS00480 PF03104 DNA polymerase family B, exonuclease domain APS46_RS00480 PF00136 DNA polymerase family B APS46_RS00495 PF00596 Class II Aldolase and Adducin N-terminal domain APS46_RS00500 PF02610 L-arabinose isomerase APS46_RS00500 PF11762 L-arabinose isomerase C-terminal domain APS46_RS00505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS46_RS00510 PF12833 Helix-turn-helix domain APS46_RS00510 PF02311 AraC-like ligand binding domain APS46_RS00515 PF09335 SNARE associated Golgi protein APS46_RS00520 PF00005 ABC transporter APS46_RS00525 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS00535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS46_RS00535 PF12793 Sugar transport-related sRNA regulator N-term APS46_RS00545 PF00694 Aconitase C-terminal domain APS46_RS00550 PF00330 Aconitase family (aconitate hydratase) APS46_RS00555 PF00180 Isocitrate/isopropylmalate dehydrogenase APS46_RS00560 PF08502 LeuA allosteric (dimerisation) domain APS46_RS00560 PF00682 HMGL-like APS46_RS00565 PF08054 Leucine operon leader peptide APS46_RS00570 PF03466 LysR substrate binding domain APS46_RS00570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS00575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS46_RS00575 PF00205 Thiamine pyrophosphate enzyme, central domain APS46_RS00575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS46_RS00580 PF10369 Small subunit of acetolactate synthase APS46_RS00585 PF00356 Bacterial regulatory proteins, lacI family APS46_RS00585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APS46_RS00590 PF02381 MraZ protein, putative antitoxin-like APS46_RS00595 PF01795 MraW methylase family APS46_RS00600 PF04999 Cell division protein FtsL APS46_RS00605 PF00905 Penicillin binding protein transpeptidase domain APS46_RS00605 PF03717 Penicillin-binding Protein dimerisation domain APS46_RS00610 PF02875 Mur ligase family, glutamate ligase domain APS46_RS00610 PF01225 Mur ligase family, catalytic domain APS46_RS00610 PF08245 Mur ligase middle domain APS46_RS00615 PF08245 Mur ligase middle domain APS46_RS00615 PF02875 Mur ligase family, glutamate ligase domain APS46_RS00615 PF01225 Mur ligase family, catalytic domain APS46_RS00620 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APS46_RS00620 PF00953 Glycosyl transferase family 4 APS46_RS00625 PF08245 Mur ligase middle domain APS46_RS00625 PF02875 Mur ligase family, glutamate ligase domain APS46_RS00630 PF01098 Cell cycle protein APS46_RS00635 PF04101 Glycosyltransferase family 28 C-terminal domain APS46_RS00635 PF03033 Glycosyltransferase family 28 N-terminal domain APS46_RS00640 PF08245 Mur ligase middle domain APS46_RS00640 PF02875 Mur ligase family, glutamate ligase domain APS46_RS00640 PF01225 Mur ligase family, catalytic domain APS46_RS00645 PF01820 D-ala D-ala ligase N-terminus APS46_RS00645 PF07478 D-ala D-ala ligase C-terminus APS46_RS00650 PF03799 Cell division protein FtsQ APS46_RS00650 PF08478 POTRA domain, FtsQ-type APS46_RS00655 PF02491 SHS2 domain inserted in FTSA APS46_RS00660 PF12327 FtsZ family, C-terminal domain APS46_RS00660 PF00091 Tubulin/FtsZ family, GTPase domain APS46_RS00665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase APS46_RS00670 PF06558 Secretion monitor precursor protein (SecM) APS46_RS00675 PF07516 SecA Wing and Scaffold domain APS46_RS00675 PF01043 SecA preprotein cross-linking domain APS46_RS00675 PF07517 SecA DEAD-like domain APS46_RS00675 PF02810 SEC-C motif APS46_RS00680 PF00293 NUDIX domain APS46_RS00690 PF03884 DNA gyrase inhibitor YacG APS46_RS00695 PF07072 Cell division protein APS46_RS00700 PF01121 Dephospho-CoA kinase APS46_RS00705 PF00478 IMP dehydrogenase / GMP reductase domain APS46_RS00710 PF00482 Type II secretion system (T2SS), protein F APS46_RS00715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain APS46_RS00715 PF00437 Type II/IV secretion system protein APS46_RS00720 PF07963 Prokaryotic N-terminal methylation motif APS46_RS00725 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain APS46_RS00725 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain APS46_RS00730 PF01510 N-acetylmuramoyl-L-alanine amidase APS46_RS00735 PF17113 Regulatory signalling modulator protein AmpE APS46_RS00740 PF04616 Glycosyl hydrolases family 43 APS46_RS00740 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain APS46_RS00750 PF00324 Amino acid permease APS46_RS00755 PF00392 Bacterial regulatory proteins, gntR family APS46_RS00755 PF07729 FCD domain APS46_RS00760 PF17831 Pyruvate dehydrogenase E1 component middle domain APS46_RS00760 PF00456 Transketolase, thiamine diphosphate binding domain APS46_RS00765 PF02817 e3 binding domain APS46_RS00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APS46_RS00765 PF00364 Biotin-requiring enzyme APS46_RS00770 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS00770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS46_RS00785 PF11737 Protein of unknown function (DUF3300) APS46_RS00790 PF11791 Aconitate B N-terminal domain APS46_RS00790 PF06434 Aconitate hydratase 2 N-terminus APS46_RS00790 PF00330 Aconitase family (aconitate hydratase) APS46_RS00820 PF06434 Aconitate hydratase 2 N-terminus APS46_RS00820 PF11791 Aconitate B N-terminal domain APS46_RS00820 PF00330 Aconitase family (aconitate hydratase) APS46_RS00835 PF06062 Uncharacterised protein family (UPF0231) APS46_RS00840 PF03812 2-keto-3-deoxygluconate permease APS46_RS00850 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APS46_RS00855 PF08220 DeoR-like helix-turn-helix domain APS46_RS00855 PF00455 DeoR C terminal sensor domain APS46_RS00860 PF02675 S-adenosylmethionine decarboxylase APS46_RS00865 PF17284 Spermidine synthase tetramerisation domain APS46_RS00870 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) APS46_RS00875 PF07732 Multicopper oxidase APS46_RS00875 PF07731 Multicopper oxidase APS46_RS00875 PF00394 Multicopper oxidase APS46_RS00880 PF01011 PQQ enzyme repeat APS46_RS00885 PF00156 Phosphoribosyl transferase domain APS46_RS00890 PF00484 Carbonic anhydrase APS46_RS00895 PF00005 ABC transporter APS46_RS00900 PF01061 ABC-2 type transporter APS46_RS00905 PF00419 Fimbrial protein APS46_RS00910 PF13954 PapC N-terminal domain APS46_RS00910 PF00577 Outer membrane usher protein APS46_RS00910 PF13953 PapC C-terminal domain APS46_RS00915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS00915 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS00925 PF03610 PTS system fructose IIA component APS46_RS00930 PF01522 Polysaccharide deacetylase APS46_RS00950 PF00419 Fimbrial protein APS46_RS00955 PF13953 PapC C-terminal domain APS46_RS00955 PF13954 PapC N-terminal domain APS46_RS00955 PF00577 Outer membrane usher protein APS46_RS00960 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS00960 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS00970 PF02261 Aspartate decarboxylase APS46_RS00975 PF02569 Pantoate-beta-alanine ligase APS46_RS00980 PF02548 Ketopantoate hydroxymethyltransferase APS46_RS00985 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) APS46_RS00990 PF12626 Polymerase A arginine-rich C-terminus APS46_RS00990 PF12627 Probable RNA and SrmB- binding site of polymerase A APS46_RS00990 PF01743 Poly A polymerase head domain APS46_RS00995 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS46_RS01000 PF01258 Prokaryotic dksA/traR C4-type zinc finger APS46_RS01005 PF03749 Sugar fermentation stimulation protein RE domain APS46_RS01005 PF17746 SfsA N-terminal OB domain APS46_RS01010 PF02834 LigT like Phosphoesterase APS46_RS01015 PF00271 Helicase conserved C-terminal domain APS46_RS01015 PF04408 Helicase associated domain (HA2) APS46_RS01015 PF08482 ATP-dependent helicase C-terminal APS46_RS01015 PF00270 DEAD/DEAH box helicase APS46_RS01020 PF14814 Bifunctional transglycosylase second domain APS46_RS01020 PF00905 Penicillin binding protein transpeptidase domain APS46_RS01020 PF00912 Transglycosylase APS46_RS01020 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal APS46_RS01025 PF00593 TonB dependent receptor APS46_RS01025 PF07715 TonB-dependent Receptor Plug Domain APS46_RS01030 PF00005 ABC transporter APS46_RS01035 PF01497 Periplasmic binding protein APS46_RS01040 PF01032 FecCD transport family APS46_RS01050 PF13953 PapC C-terminal domain APS46_RS01050 PF13954 PapC N-terminal domain APS46_RS01050 PF00577 Outer membrane usher protein APS46_RS01055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS01055 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS01060 PF00419 Fimbrial protein APS46_RS01065 PF00419 Fimbrial protein APS46_RS01070 PF00419 Fimbrial protein APS46_RS01075 PF11245 Protein of unknown function (DUF2544) APS46_RS01080 PF00202 Aminotransferase class-III APS46_RS01085 PF00654 Voltage gated chloride channel APS46_RS01090 PF01521 Iron-sulphur cluster biosynthesis APS46_RS01095 PF03458 UPF0126 domain APS46_RS01100 PF01497 Periplasmic binding protein APS46_RS01105 PF01048 Phosphorylase superfamily APS46_RS01110 PF13286 Phosphohydrolase-associated domain APS46_RS01110 PF01966 HD domain APS46_RS01115 PF00595 PDZ domain APS46_RS01120 PF17853 GGDEF-like domain APS46_RS01120 PF05651 Putative sugar diacid recognition APS46_RS01120 PF13556 PucR C-terminal helix-turn-helix domain APS46_RS01125 PF11944 Protein of unknown function (DUF3461) APS46_RS01130 PF00083 Sugar (and other) transporter APS46_RS01130 PF07690 Major Facilitator Superfamily APS46_RS01135 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal APS46_RS01135 PF14602 Hexapeptide repeat of succinyl-transferase APS46_RS01135 PF00132 Bacterial transferase hexapeptide (six repeats) APS46_RS01140 PF01966 HD domain APS46_RS01140 PF08335 GlnD PII-uridylyltransferase APS46_RS01140 PF01842 ACT domain APS46_RS01140 PF01909 Nucleotidyltransferase domain APS46_RS01145 PF00557 Metallopeptidase family M24 APS46_RS01150 PF00318 Ribosomal protein S2 APS46_RS01155 PF00889 Elongation factor TS APS46_RS01160 PF00696 Amino acid kinase family APS46_RS01165 PF01765 Ribosome recycling factor APS46_RS01170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain APS46_RS01170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase APS46_RS01170 PF13288 DXP reductoisomerase C-terminal domain APS46_RS01175 PF01255 Putative undecaprenyl diphosphate synthase APS46_RS01185 PF17820 PDZ domain APS46_RS01185 PF02163 Peptidase family M50 APS46_RS01190 PF07244 Surface antigen variable number repeat APS46_RS01190 PF01103 Surface antigen APS46_RS01195 PF03938 Outer membrane protein (OmpH-like) APS46_RS01200 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APS46_RS01200 PF00132 Bacterial transferase hexapeptide (six repeats) APS46_RS01205 PF07977 FabA-like domain APS46_RS01210 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 APS46_RS01210 PF00132 Bacterial transferase hexapeptide (six repeats) APS46_RS01215 PF02684 Lipid-A-disaccharide synthetase APS46_RS01220 PF01351 Ribonuclease HII APS46_RS01225 PF14579 Helix-hairpin-helix motif APS46_RS01225 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS46_RS01225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS46_RS01225 PF01336 OB-fold nucleic acid binding domain APS46_RS01225 PF02811 PHP domain APS46_RS01230 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APS46_RS01235 PF18416 N-acetylglucosamine binding protein domain 2 APS46_RS01235 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading APS46_RS01240 PF01276 Orn/Lys/Arg decarboxylase, major domain APS46_RS01240 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain APS46_RS01240 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain APS46_RS01245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS46_RS01250 PF01171 PP-loop family APS46_RS01250 PF09179 TilS substrate binding domain APS46_RS01250 PF11734 TilS substrate C-terminal domain APS46_RS01255 PF07073 Modulator of Rho-dependent transcription termination (ROF) APS46_RS01260 PF06786 Uncharacterised protein family (UPF0253) APS46_RS01265 PF07152 YaeQ protein APS46_RS01270 PF00472 RF-1 domain APS46_RS01275 PF17185 NlpE C-terminal OB domain APS46_RS01275 PF04170 NlpE N-terminal domain APS46_RS01280 PF03129 Anticodon binding domain APS46_RS01280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS46_RS01280 PF04073 Aminoacyl-tRNA editing domain APS46_RS01285 PF01980 tRNA-methyltransferase O APS46_RS01285 PF18389 TrmO C-terminal domain APS46_RS01290 PF16358 RcsF lipoprotein APS46_RS01295 PF03180 NLPA lipoprotein APS46_RS01300 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS01305 PF00005 ABC transporter APS46_RS01305 PF09383 NIL domain APS46_RS01345 PF00248 Aldo/keto reductase family APS46_RS01350 PF03466 LysR substrate binding domain APS46_RS01350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS01355 PF07690 Major Facilitator Superfamily APS46_RS01360 PF03372 Endonuclease/Exonuclease/phosphatase family APS46_RS01365 PF08241 Methyltransferase domain APS46_RS01370 PF01476 LysM domain APS46_RS01370 PF01464 Transglycosylase SLT domain APS46_RS01375 PF16123 Hydroxyacylglutathione hydrolase C-terminus APS46_RS01375 PF00753 Metallo-beta-lactamase superfamily APS46_RS01380 PF08241 Methyltransferase domain APS46_RS01385 PF00075 RNase H APS46_RS01390 PF00929 Exonuclease APS46_RS01410 PF05947 Type VI secretion system, TssF APS46_RS01415 PF04965 Gene 25-like lysozyme APS46_RS01435 PF07724 AAA domain (Cdc48 subfamily) APS46_RS01435 PF00004 ATPase family associated with various cellular activities (AAA) APS46_RS01435 PF17871 AAA lid domain APS46_RS01435 PF10431 C-terminal, D2-small domain, of ClpB protein APS46_RS01440 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 APS46_RS01445 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath APS46_RS01485 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE APS46_RS01490 PF05736 OprF membrane domain APS46_RS01490 PF00691 OmpA family APS46_RS01505 PF06761 Intracellular multiplication and human macrophage-killing APS46_RS01505 PF06744 Type VI secretion protein IcmF C-terminal APS46_RS01505 PF14331 ImcF-related N-terminal domain APS46_RS01535 PF04717 Type VI secretion system, phage-baseplate injector APS46_RS01535 PF06715 Gp5 C-terminal repeat (3 copies) APS46_RS01545 PF03527 RHS protein APS46_RS01545 PF05593 RHS Repeat APS46_RS01575 PF01695 IstB-like ATP binding protein APS46_RS01600 PF01037 Lrp/AsnC ligand binding domain APS46_RS01600 PF13404 AsnC-type helix-turn-helix domain APS46_RS01615 PF13505 Outer membrane protein beta-barrel domain APS46_RS01625 PF00795 Carbon-nitrogen hydrolase APS46_RS01630 PF02770 Acyl-CoA dehydrogenase, middle domain APS46_RS01630 PF09317 Domain of unknown function (DUF1974) APS46_RS01630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS46_RS01630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS46_RS01635 PF13580 SIS domain APS46_RS01640 PF13230 Glutamine amidotransferases class-II APS46_RS01645 PF03734 L,D-transpeptidase catalytic domain APS46_RS01650 PF11798 IMS family HHH motif APS46_RS01650 PF11799 impB/mucB/samB family C-terminal domain APS46_RS01650 PF00817 impB/mucB/samB family APS46_RS01660 PF00472 RF-1 domain APS46_RS01665 PF07687 Peptidase dimerisation domain APS46_RS01665 PF01546 Peptidase family M20/M25/M40 APS46_RS01670 PF00156 Phosphoribosyl transferase domain APS46_RS01675 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) APS46_RS01680 PF07417 Sigma factor-binding transcriptional regulator Crl APS46_RS01685 PF00267 Gram-negative porin APS46_RS01690 PF00696 Amino acid kinase family APS46_RS01690 PF01472 PUA domain APS46_RS01695 PF00171 Aldehyde dehydrogenase family APS46_RS01705 PF00589 Phage integrase family APS46_RS01795 PF00717 Peptidase S24-like APS46_RS01795 PF01381 Helix-turn-helix APS46_RS01815 PF00772 DnaB-like helicase N terminal domain APS46_RS01815 PF03796 DnaB-like helicase C terminal domain APS46_RS01820 PF05772 NinB protein APS46_RS01850 PF03589 Antitermination protein APS46_RS01860 PF00959 Phage lysozyme APS46_RS01865 PF03245 Bacteriophage Rz lysis protein APS46_RS01975 PF00535 Glycosyl transferase family 2 APS46_RS01980 PF04138 GtrA-like protein APS46_RS01990 PF08841 Diol dehydratase reactivase ATPase-like domain APS46_RS01990 PF18427 DD-reactivating factor swiveling domain APS46_RS01995 PF08986 Domain of unknown function (DUF1889) APS46_RS02000 PF07690 Major Facilitator Superfamily APS46_RS02005 PF00330 Aconitase family (aconitate hydratase) APS46_RS02010 PF00694 Aconitase C-terminal domain APS46_RS02015 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS46_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS02025 PF03466 LysR substrate binding domain APS46_RS02040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS02040 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS02050 PF00577 Outer membrane usher protein APS46_RS02050 PF13954 PapC N-terminal domain APS46_RS02050 PF13953 PapC C-terminal domain APS46_RS02055 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS02055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS02060 PF16970 Type-1 fimbrial protein, A APS46_RS02075 PF12792 CSS motif domain associated with EAL APS46_RS02075 PF00563 EAL domain APS46_RS02090 PF13505 Outer membrane protein beta-barrel domain APS46_RS02110 PF02321 Outer membrane efflux protein APS46_RS02115 PF00873 AcrB/AcrD/AcrF family APS46_RS02120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS46_RS02125 PF00403 Heavy-metal-associated domain APS46_RS02130 PF09278 MerR, DNA binding APS46_RS02130 PF00376 MerR family regulatory protein APS46_RS02145 PF07690 Major Facilitator Superfamily APS46_RS02150 PF01555 DNA methylase APS46_RS02150 PF18273 Type III R-M EcoP15I C-terminal domain APS46_RS02155 PF08774 VRR-NUC domain APS46_RS02155 PF04851 Type III restriction enzyme, res subunit APS46_RS02165 PF01654 Cytochrome bd terminal oxidase subunit I APS46_RS02170 PF02322 Cytochrome bd terminal oxidase subunit II APS46_RS02185 PF07715 TonB-dependent Receptor Plug Domain APS46_RS02185 PF00593 TonB dependent receptor APS46_RS02190 PF01810 LysE type translocator APS46_RS02195 PF07338 Protein of unknown function (DUF1471) APS46_RS02200 PF06506 Propionate catabolism activator APS46_RS02200 PF00158 Sigma-54 interaction domain APS46_RS02200 PF02954 Bacterial regulatory protein, Fis family APS46_RS02210 PF00285 Citrate synthase, C-terminal domain APS46_RS02215 PF03972 MmgE/PrpD family APS46_RS02220 PF00501 AMP-binding enzyme APS46_RS02220 PF13193 AMP-binding enzyme C-terminal domain APS46_RS02220 PF16177 Acetyl-coenzyme A synthetase N-terminus APS46_RS02225 PF00490 Delta-aminolevulinic acid dehydratase APS46_RS02230 PF03797 Autotransporter beta-domain APS46_RS02235 PF15977 Winged helix-turn-helix DNA binding APS46_RS02240 PF00144 Beta-lactamase APS46_RS02245 PF05992 SbmA/BacA-like family APS46_RS02250 PF07759 Protein of unknown function (DUF1615) APS46_RS02255 PF10954 Protein of unknown function (DUF2755) APS46_RS02260 PF10953 Protein of unknown function (DUF2754) APS46_RS02265 PF07478 D-ala D-ala ligase C-terminus APS46_RS02265 PF01820 D-ala D-ala ligase N-terminus APS46_RS02275 PF07690 Major Facilitator Superfamily APS46_RS02280 PF10796 Sigma-S stabilisation anti-adaptor protein APS46_RS02285 PF07769 psiF repeat APS46_RS02290 PF05230 MASE2 domain APS46_RS02290 PF00990 Diguanylate cyclase, GGDEF domain APS46_RS02295 PF14748 Pyrroline-5-carboxylate reductase dimerisation APS46_RS02295 PF03807 NADP oxidoreductase coenzyme F420-dependent APS46_RS02300 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 APS46_RS02305 PF01202 Shikimate kinase APS46_RS02310 PF16362 YaiA protein APS46_RS02315 PF07302 AroM protein APS46_RS02320 PF06865 Pyrimidine/purine nucleoside phosphorylase APS46_RS02325 PF04381 Putative exonuclease, RdgC APS46_RS02330 PF00480 ROK family APS46_RS02335 PF07690 Major Facilitator Superfamily APS46_RS02340 PF13476 AAA domain APS46_RS02345 PF12320 Type 5 capsule protein repressor C-terminal domain APS46_RS02345 PF00149 Calcineurin-like phosphoesterase APS46_RS02355 PF00486 Transcriptional regulatory protein, C terminal APS46_RS02355 PF00072 Response regulator receiver domain APS46_RS02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS02360 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS02360 PF00989 PAS fold APS46_RS02360 PF11808 Phosphate regulon sensor protein PhoR APS46_RS02365 PF05525 Branched-chain amino acid transport protein APS46_RS02370 PF00324 Amino acid permease APS46_RS02375 PF02903 Alpha amylase, N-terminal ig-like domain APS46_RS02375 PF00128 Alpha amylase, catalytic domain APS46_RS02380 PF00578 AhpC/TSA family APS46_RS02380 PF10417 C-terminal domain of 1-Cys peroxiredoxin APS46_RS02385 PF04336 Acyl carrier protein phosphodiesterase APS46_RS02390 PF02547 Queuosine biosynthesis protein APS46_RS02395 PF01702 Queuine tRNA-ribosyltransferase APS46_RS02400 PF02699 Preprotein translocase subunit APS46_RS02405 PF07549 SecD/SecF GG Motif APS46_RS02405 PF13721 SecD export protein N-terminal TM region APS46_RS02405 PF02355 Protein export membrane protein APS46_RS02410 PF07549 SecD/SecF GG Motif APS46_RS02410 PF02355 Protein export membrane protein APS46_RS02425 PF01844 HNH endonuclease APS46_RS02435 PF03502 Nucleoside-specific channel-forming protein, Tsx APS46_RS02440 PF11622 Protein of unknown function (DUF3251) APS46_RS02445 PF03477 ATP cone domain APS46_RS02450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APS46_RS02450 PF01872 RibD C-terminal domain APS46_RS02455 PF00885 6,7-dimethyl-8-ribityllumazine synthase APS46_RS02460 PF01029 NusB family APS46_RS02465 PF02769 AIR synthase related protein, C-terminal domain APS46_RS02465 PF00586 AIR synthase related protein, N-terminal domain APS46_RS02470 PF04608 Phosphatidylglycerophosphatase A APS46_RS02475 PF00248 Aldo/keto reductase family APS46_RS02480 PF02779 Transketolase, pyrimidine binding domain APS46_RS02480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APS46_RS02480 PF02780 Transketolase, C-terminal domain APS46_RS02485 PF00348 Polyprenyl synthetase APS46_RS02490 PF02609 Exonuclease VII small subunit APS46_RS02495 PF02926 THUMP domain APS46_RS02495 PF02568 Thiamine biosynthesis protein (ThiI) APS46_RS02500 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS02505 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS02510 PF08402 TOBE domain APS46_RS02510 PF00005 ABC transporter APS46_RS02515 PF01547 Bacterial extracellular solute-binding protein APS46_RS02520 PF00392 Bacterial regulatory proteins, gntR family APS46_RS02520 PF07702 UTRA domain APS46_RS02525 PF00266 Aminotransferase class-V APS46_RS02535 PF01965 DJ-1/PfpI family APS46_RS02540 PF08546 Ketopantoate reductase PanE/ApbA C terminal APS46_RS02540 PF02558 Ketopantoate reductase PanE/ApbA APS46_RS02545 PF04461 Protein of unknown function (DUF520) APS46_RS02550 PF07690 Major Facilitator Superfamily APS46_RS02565 PF01040 UbiA prenyltransferase family APS46_RS02570 PF03626 Prokaryotic Cytochrome C oxidase subunit IV APS46_RS02575 PF00510 Cytochrome c oxidase subunit III APS46_RS02580 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS46_RS02585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APS46_RS02585 PF06481 COX Aromatic Rich Motif APS46_RS02590 PF07690 Major Facilitator Superfamily APS46_RS02595 PF08139 Prokaryotic membrane lipoprotein lipid attachment site APS46_RS02595 PF03923 Uncharacterized lipoprotein APS46_RS02600 PF01722 BolA-like protein APS46_RS02605 PF05698 Bacterial trigger factor protein (TF) C-terminus APS46_RS02605 PF05697 Bacterial trigger factor protein (TF) APS46_RS02605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS46_RS02610 PF00574 Clp protease APS46_RS02615 PF10431 C-terminal, D2-small domain, of ClpB protein APS46_RS02615 PF07724 AAA domain (Cdc48 subfamily) APS46_RS02615 PF06689 ClpX C4-type zinc finger APS46_RS02620 PF02190 ATP-dependent protease La (LON) substrate-binding domain APS46_RS02620 PF05362 Lon protease (S16) C-terminal proteolytic domain APS46_RS02620 PF00004 ATPase family associated with various cellular activities (AAA) APS46_RS02625 PF00216 Bacterial DNA-binding protein APS46_RS02630 PF13145 PPIC-type PPIASE domain APS46_RS02645 PF06508 Queuosine biosynthesis protein QueC APS46_RS02650 PF12793 Sugar transport-related sRNA regulator N-term APS46_RS02650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS46_RS02665 PF13404 AsnC-type helix-turn-helix domain APS46_RS02665 PF01037 Lrp/AsnC ligand binding domain APS46_RS02670 PF00005 ABC transporter APS46_RS02670 PF00664 ABC transporter transmembrane region APS46_RS02675 PF00664 ABC transporter transmembrane region APS46_RS02675 PF00005 ABC transporter APS46_RS02680 PF00543 Nitrogen regulatory protein P-II APS46_RS02685 PF00909 Ammonium Transporter Family APS46_RS02695 PF09619 Type III secretion system lipoprotein chaperone (YscW) APS46_RS02700 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APS46_RS02710 PF12792 CSS motif domain associated with EAL APS46_RS02710 PF00563 EAL domain APS46_RS02715 PF01197 Ribosomal protein L31 APS46_RS02720 PF00444 Ribosomal protein L36 APS46_RS02725 PF10777 Inner membrane protein YlaC APS46_RS02730 PF14602 Hexapeptide repeat of succinyl-transferase APS46_RS02730 PF12464 Maltose acetyltransferase APS46_RS02735 PF05321 Haemolysin expression modulating protein APS46_RS02740 PF10757 Biofilm formation regulator YbaJ APS46_RS02745 PF00873 AcrB/AcrD/AcrF family APS46_RS02750 PF00529 HlyD membrane-fusion protein of T1SS APS46_RS02750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS46_RS02755 PF00440 Bacterial regulatory proteins, tetR family APS46_RS02755 PF08361 MAATS-type transcriptional repressor, C-terminal region APS46_RS02760 PF00924 Mechanosensitive ion channel APS46_RS02760 PF12795 Mechanosensitive ion channel porin domain APS46_RS02760 PF12794 Mechanosensitive ion channel inner membrane domain 1 APS46_RS02765 PF04754 Putative transposase, YhgA-like APS46_RS02770 PF04754 Putative transposase, YhgA-like APS46_RS02775 PF10689 Protein of unknown function (DUF2496) APS46_RS02780 PF07445 Primosomal replication protein priC APS46_RS02785 PF04304 Protein of unknown function (DUF454) APS46_RS02790 PF00156 Phosphoribosyl transferase domain APS46_RS02795 PF12169 DNA polymerase III subunits gamma and tau domain III APS46_RS02795 PF12170 DNA polymerase III tau subunit V interacting with alpha APS46_RS02795 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding APS46_RS02800 PF02575 YbaB/EbfC DNA-binding family APS46_RS02805 PF13662 Toprim domain APS46_RS02805 PF02132 RecR protein APS46_RS02810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS02810 PF00183 Hsp90 protein APS46_RS02815 PF05191 Adenylate kinase, active site lid APS46_RS02820 PF00762 Ferrochelatase APS46_RS02825 PF07859 alpha/beta hydrolase fold APS46_RS02835 PF02254 TrkA-N domain APS46_RS02835 PF00999 Sodium/hydrogen exchanger family APS46_RS02840 PF07690 Major Facilitator Superfamily APS46_RS02845 PF00149 Calcineurin-like phosphoesterase APS46_RS02845 PF02872 5'-nucleotidase, C-terminal domain APS46_RS02850 PF04073 Aminoacyl-tRNA editing domain APS46_RS02855 PF01963 TraB family APS46_RS02865 PF00403 Heavy-metal-associated domain APS46_RS02870 PF13411 MerR HTH family regulatory protein APS46_RS02875 PF01957 NfeD-like C-terminal, partner-binding APS46_RS02880 PF16200 C-terminal region of band_7 APS46_RS02880 PF01145 SPFH domain / Band 7 family APS46_RS02885 PF00005 ABC transporter APS46_RS02890 PF03649 Uncharacterised protein family (UPF0014) APS46_RS02895 PF00085 Thioredoxin APS46_RS02900 PF00106 short chain dehydrogenase APS46_RS02905 PF13472 GDSL-like Lipase/Acylhydrolase family APS46_RS02910 PF00005 ABC transporter APS46_RS02925 PF03180 NLPA lipoprotein APS46_RS02930 PF00005 ABC transporter APS46_RS02930 PF09383 NIL domain APS46_RS02935 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS02945 PF03466 LysR substrate binding domain APS46_RS02945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS02950 PF04115 Ureidoglycolate lyase APS46_RS02955 PF01614 Bacterial transcriptional regulator APS46_RS02955 PF09339 IclR helix-turn-helix domain APS46_RS02960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS46_RS02960 PF00205 Thiamine pyrophosphate enzyme, central domain APS46_RS02960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS46_RS02965 PF01261 Xylose isomerase-like TIM barrel APS46_RS02970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APS46_RS02970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS46_RS02980 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APS46_RS02985 PF01979 Amidohydrolase family APS46_RS02990 PF00860 Permease family APS46_RS02995 PF02595 Glycerate kinase family APS46_RS03000 PF07883 Cupin domain APS46_RS03000 PF05899 Protein of unknown function (DUF861) APS46_RS03005 PF01546 Peptidase family M20/M25/M40 APS46_RS03010 PF02615 Malate/L-lactate dehydrogenase APS46_RS03015 PF02629 CoA binding domain APS46_RS03015 PF00549 CoA-ligase APS46_RS03020 PF06545 Protein of unknown function (DUF1116) APS46_RS03025 PF11392 Protein of unknown function (DUF2877) APS46_RS03030 PF00696 Amino acid kinase family APS46_RS03035 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain APS46_RS03035 PF02222 ATP-grasp domain APS46_RS03040 PF00731 AIR carboxylase APS46_RS03045 PF12850 Calcineurin-like phosphoesterase superfamily domain APS46_RS03050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APS46_RS03055 PF01406 tRNA synthetases class I (C) catalytic domain APS46_RS03055 PF09190 DALR domain APS46_RS03070 PF04307 LexA-binding, inner membrane-associated putative hydrolase APS46_RS03080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APS46_RS03080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APS46_RS03085 PF00419 Fimbrial protein APS46_RS03095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS03095 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS03100 PF13953 PapC C-terminal domain APS46_RS03100 PF13954 PapC N-terminal domain APS46_RS03100 PF00577 Outer membrane usher protein APS46_RS03105 PF00419 Fimbrial protein APS46_RS03110 PF00419 Fimbrial protein APS46_RS03115 PF00196 Bacterial regulatory proteins, luxR family APS46_RS03115 PF00072 Response regulator receiver domain APS46_RS03130 PF00196 Bacterial regulatory proteins, luxR family APS46_RS03140 PF00589 Phage integrase family APS46_RS03145 PF01527 Transposase APS46_RS03155 PF00535 Glycosyl transferase family 2 APS46_RS03160 PF04138 GtrA-like protein APS46_RS03170 PF00672 HAMP domain APS46_RS03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS03170 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS03175 PF00873 AcrB/AcrD/AcrF family APS46_RS03180 PF12852 Cupin APS46_RS03180 PF12833 Helix-turn-helix domain APS46_RS03185 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS03185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS46_RS03190 PF07338 Protein of unknown function (DUF1471) APS46_RS03195 PF04224 Protein of unknown function, DUF417 APS46_RS03205 PF00324 Amino acid permease APS46_RS03210 PF00924 Mechanosensitive ion channel APS46_RS03215 PF00657 GDSL-like Lipase/Acylhydrolase APS46_RS03215 PF03797 Autotransporter beta-domain APS46_RS03220 PF03610 PTS system fructose IIA component APS46_RS03220 PF00874 PRD domain APS46_RS03220 PF00158 Sigma-54 interaction domain APS46_RS03225 PF01380 SIS domain APS46_RS03235 PF03613 PTS system mannose/fructose/sorbose family IID component APS46_RS03245 PF03830 PTS system sorbose subfamily IIB component APS46_RS03255 PF00881 Nitroreductase family APS46_RS03260 PF04237 YjbR APS46_RS03265 PF16295 Tetracyclin repressor-like, C-terminal domain APS46_RS03265 PF00440 Bacterial regulatory proteins, tetR family APS46_RS03270 PF12833 Helix-turn-helix domain APS46_RS03275 PF06643 Protein of unknown function (DUF1158) APS46_RS03280 PF04107 Glutamate-cysteine ligase family 2(GCS2) APS46_RS03285 PF17837 4'-phosphopantetheinyl transferase N-terminal domain APS46_RS03285 PF01648 4'-phosphopantetheinyl transferase superfamily APS46_RS03290 PF07715 TonB-dependent Receptor Plug Domain APS46_RS03290 PF00593 TonB dependent receptor APS46_RS03295 PF11806 Domain of unknown function (DUF3327) APS46_RS03295 PF00756 Putative esterase APS46_RS03300 PF03621 MbtH-like protein APS46_RS03305 PF00975 Thioesterase domain APS46_RS03305 PF00550 Phosphopantetheine attachment site APS46_RS03305 PF00501 AMP-binding enzyme APS46_RS03305 PF00668 Condensation domain APS46_RS03305 PF13193 AMP-binding enzyme C-terminal domain APS46_RS03310 PF02706 Chain length determinant protein APS46_RS03315 PF00005 ABC transporter APS46_RS03320 PF01032 FecCD transport family APS46_RS03325 PF01032 FecCD transport family APS46_RS03330 PF05977 Transmembrane secretion effector APS46_RS03335 PF01497 Periplasmic binding protein APS46_RS03340 PF00425 chorismate binding enzyme APS46_RS03345 PF13193 AMP-binding enzyme C-terminal domain APS46_RS03345 PF00501 AMP-binding enzyme APS46_RS03350 PF00857 Isochorismatase family APS46_RS03350 PF00550 Phosphopantetheine attachment site APS46_RS03360 PF03061 Thioesterase superfamily APS46_RS03365 PF13722 5TM C-terminal transporter carbon starvation CstA APS46_RS03365 PF02554 Carbon starvation protein CstA APS46_RS03370 PF04328 Selenoprotein, putative APS46_RS03375 PF00465 Iron-containing alcohol dehydrogenase APS46_RS03380 PF00155 Aminotransferase class I and II APS46_RS03385 PF02195 ParB-like nuclease domain APS46_RS03390 PF01507 Phosphoadenosine phosphosulfate reductase family APS46_RS03390 PF11922 Domain of unknown function (DUF3440) APS46_RS03395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS03395 PF03466 LysR substrate binding domain APS46_RS03400 PF13098 Thioredoxin-like domain APS46_RS03405 PF10417 C-terminal domain of 1-Cys peroxiredoxin APS46_RS03405 PF00578 AhpC/TSA family APS46_RS03410 PF13192 Thioredoxin domain APS46_RS03410 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS03420 PF00384 Molybdopterin oxidoreductase APS46_RS03420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS03420 PF01568 Molydopterin dinucleotide binding domain APS46_RS03425 PF13247 4Fe-4S dicluster domain APS46_RS03435 PF00582 Universal stress protein family APS46_RS03440 PF00107 Zinc-binding dehydrogenase APS46_RS03440 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS03440 PF13823 Alcohol dehydrogenase GroES-associated APS46_RS03445 PF14760 Rnk N-terminus APS46_RS03445 PF01272 Transcription elongation factor, GreA/GreB, C-term APS46_RS03450 PF00445 Ribonuclease T2 family APS46_RS03455 PF00939 Sodium:sulfate symporter transmembrane region APS46_RS03460 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase APS46_RS03465 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase APS46_RS03470 PF04223 Citrate lyase, alpha subunit (CitF) APS46_RS03475 PF03328 HpcH/HpaI aldolase/citrate lyase family APS46_RS03480 PF06857 Malonate decarboxylase delta subunit (MdcD) APS46_RS03485 PF08218 Citrate lyase ligase C-terminal domain APS46_RS03490 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain APS46_RS03490 PF17203 Single cache domain 3 APS46_RS03490 PF00989 PAS fold APS46_RS03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS03495 PF00072 Response regulator receiver domain APS46_RS03495 PF12431 Transcriptional regulator APS46_RS03500 PF03606 C4-dicarboxylate anaerobic carrier APS46_RS03505 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP APS46_RS03510 PF00313 'Cold-shock' DNA-binding domain APS46_RS03515 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APS46_RS03520 PF00795 Carbon-nitrogen hydrolase APS46_RS03525 PF02416 mttA/Hcf106 family APS46_RS03530 PF04055 Radical SAM superfamily APS46_RS03530 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family APS46_RS03535 PF03466 LysR substrate binding domain APS46_RS03535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS03540 PF03099 Biotin/lipoate A/B protein ligase family APS46_RS03545 PF04359 Protein of unknown function (DUF493) APS46_RS03550 PF00768 D-alanyl-D-alanine carboxypeptidase APS46_RS03550 PF07943 Penicillin-binding protein 5, C-terminal domain APS46_RS03555 PF05036 Sporulation related domain APS46_RS03555 PF03330 Lytic transglycolase APS46_RS03560 PF01098 Cell cycle protein APS46_RS03565 PF03717 Penicillin-binding Protein dimerisation domain APS46_RS03565 PF00905 Penicillin binding protein transpeptidase domain APS46_RS03570 PF02590 Predicted SPOUT methyltransferase APS46_RS03585 PF00300 Histidine phosphatase superfamily (branch 1) APS46_RS03590 PF00155 Aminotransferase class I and II APS46_RS03595 PF01467 Cytidylyltransferase-like APS46_RS03600 PF06144 DNA polymerase III, delta subunit APS46_RS03600 PF14840 Processivity clamp loader gamma complex DNA pol III C-term APS46_RS03605 PF04390 Lipopolysaccharide-assembly APS46_RS03610 PF08264 Anticodon-binding domain of tRNA APS46_RS03610 PF13603 Leucyl-tRNA synthetase, Domain 2 APS46_RS03610 PF00133 tRNA synthetases class I (I, L, M and V) APS46_RS03620 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus APS46_RS03625 PF03812 2-keto-3-deoxygluconate permease APS46_RS03630 PF00158 Sigma-54 interaction domain APS46_RS03630 PF02954 Bacterial regulatory protein, Fis family APS46_RS03630 PF00989 PAS fold APS46_RS03635 PF07295 Zinc-ribbon containing domain APS46_RS03645 PF06889 Protein of unknown function (DUF1266) APS46_RS03655 PF06889 Protein of unknown function (DUF1266) APS46_RS03665 PF00012 Hsp70 protein APS46_RS03675 PF01156 Inosine-uridine preferring nucleoside hydrolase APS46_RS03680 PF00005 ABC transporter APS46_RS03685 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS03690 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS03695 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS46_RS03700 PF00795 Carbon-nitrogen hydrolase APS46_RS03705 PF00571 CBS domain APS46_RS03705 PF03471 Transporter associated domain APS46_RS03710 PF02130 Uncharacterized protein family UPF0054 APS46_RS03715 PF02562 PhoH-like protein APS46_RS03720 PF01938 TRAM domain APS46_RS03720 PF04055 Radical SAM superfamily APS46_RS03720 PF00919 Uncharacterized protein family UPF0004 APS46_RS03725 PF01494 FAD binding domain APS46_RS03770 PF00733 Asparagine synthase APS46_RS03770 PF13537 Glutamine amidotransferase domain APS46_RS03775 PF13344 Haloacid dehalogenase-like hydrolase APS46_RS03780 PF01047 MarR family APS46_RS03780 PF00480 ROK family APS46_RS03785 PF01979 Amidohydrolase family APS46_RS03790 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APS46_RS03795 PF00367 phosphotransferase system, EIIB APS46_RS03795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APS46_RS03795 PF02378 Phosphotransferase system, EIIC APS46_RS03800 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS46_RS03800 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain APS46_RS03805 PF03573 outer membrane porin, OprD family APS46_RS03810 PF13982 YbfN-like lipoprotein APS46_RS03815 PF07690 Major Facilitator Superfamily APS46_RS03825 PF00890 FAD binding domain APS46_RS03825 PF14537 Cytochrome c3 APS46_RS03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS03830 PF03466 LysR substrate binding domain APS46_RS03835 PF01475 Ferric uptake regulator family APS46_RS03840 PF00258 Flavodoxin APS46_RS03845 PF01402 Ribbon-helix-helix protein, copG family APS46_RS03850 PF12697 Alpha/beta hydrolase family APS46_RS03855 PF17206 SeqA protein N-terminal domain APS46_RS03855 PF03925 SeqA protein C-terminal domain APS46_RS03860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS46_RS03860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS46_RS03860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS46_RS03860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS46_RS03870 PF13520 Amino acid permease APS46_RS03875 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain APS46_RS03875 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain APS46_RS03875 PF01276 Orn/Lys/Arg decarboxylase, major domain APS46_RS03885 PF00072 Response regulator receiver domain APS46_RS03885 PF00486 Transcriptional regulatory protein, C terminal APS46_RS03890 PF13493 Domain of unknown function (DUF4118) APS46_RS03890 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS03890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS03890 PF02702 Osmosensitive K+ channel His kinase sensor domain APS46_RS03890 PF13492 GAF domain APS46_RS03895 PF02669 K+-transporting ATPase, c chain APS46_RS03905 PF03814 Potassium-transporting ATPase A subunit APS46_RS03910 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) APS46_RS03915 PF10725 Protein of unknown function (DUF2517) APS46_RS03920 PF03441 FAD binding domain of DNA photolyase APS46_RS03920 PF00875 DNA photolyase APS46_RS03925 PF00854 POT family APS46_RS03930 PF01784 NIF3 (NGG1p interacting factor 3) APS46_RS03935 PF02682 Carboxyltransferase domain, subdomain C and D APS46_RS03940 PF02626 Carboxyltransferase domain, subdomain A and B APS46_RS03945 PF03746 LamB/YcsF family APS46_RS03955 PF00589 Phage integrase family APS46_RS03970 PF03275 UDP-galactopyranose mutase APS46_RS03985 PF01061 ABC-2 type transporter APS46_RS03990 PF00005 ABC transporter APS46_RS03995 PF17994 Galactofuranosyltransferase 2 N-terminal APS46_RS04015 PF06827 Zinc finger found in FPG and IleRS APS46_RS04015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APS46_RS04015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APS46_RS04020 PF05145 Transition state regulatory protein AbrB APS46_RS04025 PF00285 Citrate synthase, C-terminal domain APS46_RS04035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit APS46_RS04040 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit APS46_RS04045 PF02910 Fumarate reductase flavoprotein C-term APS46_RS04045 PF00890 FAD binding domain APS46_RS04050 PF13085 2Fe-2S iron-sulfur cluster binding domain APS46_RS04055 PF16870 2-oxoglutarate dehydrogenase C-terminal APS46_RS04055 PF02779 Transketolase, pyrimidine binding domain APS46_RS04055 PF00676 Dehydrogenase E1 component APS46_RS04055 PF16078 2-oxoglutarate dehydrogenase N-terminus APS46_RS04060 PF00364 Biotin-requiring enzyme APS46_RS04060 PF02817 e3 binding domain APS46_RS04060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APS46_RS04065 PF00549 CoA-ligase APS46_RS04065 PF08442 ATP-grasp domain APS46_RS04070 PF00549 CoA-ligase APS46_RS04070 PF02629 CoA binding domain APS46_RS04080 PF01654 Cytochrome bd terminal oxidase subunit I APS46_RS04085 PF02322 Cytochrome bd terminal oxidase subunit II APS46_RS04090 PF08173 Membrane bound YbgT-like protein APS46_RS04095 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) APS46_RS04100 PF03061 Thioesterase superfamily APS46_RS04105 PF01618 MotA/TolQ/ExbB proton channel family APS46_RS04110 PF02472 Biopolymer transport protein ExbD/TolR APS46_RS04115 PF06519 TolA C-terminal APS46_RS04120 PF07676 WD40-like Beta Propeller Repeat APS46_RS04120 PF04052 TolB amino-terminal domain APS46_RS04125 PF00691 OmpA family APS46_RS04130 PF13174 Tetratricopeptide repeat APS46_RS04130 PF16331 TolA binding protein trimerisation APS46_RS04185 PF02445 Quinolinate synthetase A protein APS46_RS04190 PF04973 Nicotinamide mononucleotide transporter APS46_RS04195 PF01545 Cation efflux family APS46_RS04200 PF13985 YbgS-like protein APS46_RS04205 PF00793 DAHP synthetase I family APS46_RS04210 PF05681 Fumarate hydratase (Fumerase) APS46_RS04210 PF05683 Fumarase C-terminus APS46_RS04215 PF05681 Fumarate hydratase (Fumerase) APS46_RS04220 PF03466 LysR substrate binding domain APS46_RS04220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS04225 PF03466 LysR substrate binding domain APS46_RS04230 PF03600 Citrate transporter APS46_RS04230 PF02080 TrkA-C domain APS46_RS04235 PF04277 Oxaloacetate decarboxylase, gamma chain APS46_RS04240 PF00682 HMGL-like APS46_RS04240 PF02436 Conserved carboxylase domain APS46_RS04240 PF00364 Biotin-requiring enzyme APS46_RS04245 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit APS46_RS04250 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase APS46_RS04255 PF01032 FecCD transport family APS46_RS04260 PF00005 ABC transporter APS46_RS04265 PF00300 Histidine phosphatase superfamily (branch 1) APS46_RS04270 PF01263 Aldose 1-epimerase APS46_RS04275 PF10509 Galactokinase galactose-binding signature APS46_RS04275 PF08544 GHMP kinases C terminal APS46_RS04275 PF00288 GHMP kinases N terminal domain APS46_RS04280 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain APS46_RS04280 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain APS46_RS04285 PF16363 GDP-mannose 4,6 dehydratase APS46_RS04295 PF00005 ABC transporter APS46_RS04300 PF03459 TOBE domain APS46_RS04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS04305 PF10766 Multidrug efflux pump-associated protein AcrZ APS46_RS04315 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS04320 PF03459 TOBE domain APS46_RS04320 PF00005 ABC transporter APS46_RS04330 PF10282 Lactonase, 7-bladed beta-propeller APS46_RS04335 PF01095 Pectinesterase APS46_RS04340 PF01979 Amidohydrolase family APS46_RS04345 PF00491 Arginase family APS46_RS04350 PF07702 UTRA domain APS46_RS04350 PF00392 Bacterial regulatory proteins, gntR family APS46_RS04355 PF01175 Urocanase Rossmann-like domain APS46_RS04355 PF17391 Urocanase N-terminal domain APS46_RS04355 PF17392 Urocanase C-terminal domain APS46_RS04360 PF00221 Aromatic amino acid lyase APS46_RS04365 PF01161 Phosphatidylethanolamine-binding protein APS46_RS04370 PF00202 Aminotransferase class-III APS46_RS04375 PF04055 Radical SAM superfamily APS46_RS04375 PF06968 Biotin and Thiamin Synthesis associated domain APS46_RS04380 PF00155 Aminotransferase class I and II APS46_RS04385 PF08241 Methyltransferase domain APS46_RS04395 PF17757 UvrB interaction domain APS46_RS04395 PF12344 Ultra-violet resistance protein B APS46_RS04395 PF02151 UvrB/uvrC motif APS46_RS04395 PF00271 Helicase conserved C-terminal domain APS46_RS04395 PF04851 Type III restriction enzyme, res subunit APS46_RS04405 PF12468 Type III secretion system leucine rich repeat protein APS46_RS04405 PF14496 C-terminal novel E3 ligase, LRR-interacting APS46_RS04410 PF01933 Uncharacterised protein family UPF0052 APS46_RS04415 PF04055 Radical SAM superfamily APS46_RS04415 PF06463 Molybdenum Cofactor Synthesis C APS46_RS04420 PF00994 Probable molybdopterin binding domain APS46_RS04425 PF01967 MoaC family APS46_RS04430 PF02597 ThiS family APS46_RS04435 PF02391 MoaE protein APS46_RS04440 PF01027 Inhibitor of apoptosis-promoting Bax1 APS46_RS04460 PF03706 Lysylphosphatidylglycerol synthase TM region APS46_RS04465 PF13091 PLD-like domain APS46_RS04470 PF03372 Endonuclease/Exonuclease/phosphatase family APS46_RS04475 PF11076 Putative inner membrane protein YbhQ APS46_RS04490 PF00005 ABC transporter APS46_RS04495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS46_RS04500 PF09209 Tetracyclin repressor-like, C-terminal domain APS46_RS04500 PF00440 Bacterial regulatory proteins, tetR family APS46_RS04505 PF00271 Helicase conserved C-terminal domain APS46_RS04505 PF00270 DEAD/DEAH box helicase APS46_RS04510 PF06733 DEAD_2 APS46_RS04510 PF13307 Helicase C-terminal domain APS46_RS04515 PF02885 Glycosyl transferase family, helical bundle domain APS46_RS04520 PF07338 Protein of unknown function (DUF1471) APS46_RS04530 PF01258 Prokaryotic dksA/traR C4-type zinc finger APS46_RS04535 PF05971 RNA methyltransferase APS46_RS04540 PF00924 Mechanosensitive ion channel APS46_RS04545 PF00005 ABC transporter APS46_RS04550 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS04555 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS46_RS04560 PF00210 Ferritin-like domain APS46_RS04565 PF00892 EamA-like transporter family APS46_RS04570 PF13505 Outer membrane protein beta-barrel domain APS46_RS04575 PF00884 Sulfatase APS46_RS04580 PF01325 Iron dependent repressor, N-terminal DNA binding domain APS46_RS04580 PF02742 Iron dependent repressor, metal binding and dimerisation domain APS46_RS04585 PF03600 Citrate transporter APS46_RS04590 PF17969 L,D-transpeptidase C-terminal domain APS46_RS04590 PF03734 L,D-transpeptidase catalytic domain APS46_RS04595 PF12848 ABC transporter APS46_RS04595 PF00005 ABC transporter APS46_RS04600 PF07350 Protein of unknown function (DUF1479) APS46_RS04610 PF01228 Glycine radical APS46_RS04610 PF02901 Pyruvate formate lyase-like APS46_RS04615 PF04055 Radical SAM superfamily APS46_RS04620 PF00899 ThiF family APS46_RS04625 PF03453 MoeA N-terminal region (domain I and II) APS46_RS04625 PF03454 MoeA C-terminal region (domain IV) APS46_RS04625 PF00994 Probable molybdopterin binding domain APS46_RS04630 PF01112 Asparaginase APS46_RS04635 PF00005 ABC transporter APS46_RS04635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS46_RS04640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS46_RS04645 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS04650 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS04650 PF12911 N-terminal TM domain of oligopeptide transport permease C APS46_RS04655 PF00919 Uncharacterized protein family UPF0004 APS46_RS04655 PF18693 TRAM domain APS46_RS04655 PF04055 Radical SAM superfamily APS46_RS04660 PF10799 Biofilm formation protein (YliH/bssR) APS46_RS04665 PF03328 HpcH/HpaI aldolase/citrate lyase family APS46_RS04670 PF01012 Electron transfer flavoprotein domain APS46_RS04675 PF00766 Electron transfer flavoprotein FAD-binding domain APS46_RS04675 PF01012 Electron transfer flavoprotein domain APS46_RS04685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS46_RS04685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS46_RS04685 PF02770 Acyl-CoA dehydrogenase, middle domain APS46_RS04695 PF03466 LysR substrate binding domain APS46_RS04695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS04705 PF07995 Glucose / Sorbosone dehydrogenase APS46_RS04710 PF07995 Glucose / Sorbosone dehydrogenase APS46_RS04715 PF13417 Glutathione S-transferase, N-terminal domain APS46_RS04715 PF00043 Glutathione S-transferase, C-terminal domain APS46_RS04720 PF00768 D-alanyl-D-alanine carboxypeptidase APS46_RS04720 PF07943 Penicillin-binding protein 5, C-terminal domain APS46_RS04725 PF08220 DeoR-like helix-turn-helix domain APS46_RS04725 PF00455 DeoR C terminal sensor domain APS46_RS04730 PF01569 PAP2 superfamily APS46_RS04735 PF07690 Major Facilitator Superfamily APS46_RS04745 PF07690 Major Facilitator Superfamily APS46_RS04750 PF00440 Bacterial regulatory proteins, tetR family APS46_RS04755 PF06826 Predicted Permease Membrane Region APS46_RS04755 PF02080 TrkA-C domain APS46_RS04760 PF11045 Putative inner membrane protein of Enterobacteriaceae APS46_RS04765 PF00462 Glutaredoxin APS46_RS04770 PF07214 Protein of unknown function (DUF1418) APS46_RS04775 PF00881 Nitroreductase family APS46_RS04780 PF08443 RimK-like ATP-grasp domain APS46_RS04780 PF18030 RimK PreATP-grasp domain APS46_RS04785 PF10722 Putative bacterial sensory transduction regulator APS46_RS04790 PF13416 Bacterial extracellular solute-binding protein APS46_RS04795 PF08402 TOBE domain APS46_RS04795 PF00005 ABC transporter APS46_RS04800 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS04805 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS04810 PF10767 Protein of unknown function (DUF2593) APS46_RS04815 PF05958 tRNA (Uracil-5-)-methyltransferase APS46_RS04820 PF03611 PTS system sugar-specific permease component APS46_RS04835 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS46_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS04845 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS04850 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS46_RS04855 PF00005 ABC transporter APS46_RS04860 PF12883 Protein of unknown function (DUF3828) APS46_RS04865 PF01906 Putative heavy-metal-binding APS46_RS04870 PF01510 N-acetylmuramoyl-L-alanine amidase APS46_RS04875 PF01370 NAD dependent epimerase/dehydratase family APS46_RS04880 PF13460 NAD(P)H-binding APS46_RS04880 PF11066 Protein of unknown function (DUF2867) APS46_RS04885 PF01212 Beta-eliminating lyase APS46_RS04890 PF00205 Thiamine pyrophosphate enzyme, central domain APS46_RS04890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS46_RS04890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS46_RS04895 PF00111 2Fe-2S iron-sulfur cluster binding domain APS46_RS04895 PF00970 Oxidoreductase FAD-binding domain APS46_RS04895 PF00175 Oxidoreductase NAD-binding domain APS46_RS04900 PF03063 Prismane/CO dehydrogenase family APS46_RS04905 PF03956 Lysine exporter LysO APS46_RS04910 PF11398 Protein of unknown function (DUF2813) APS46_RS04915 PF04393 Protein of unknown function (DUF535) APS46_RS04920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS46_RS04925 PF02687 FtsX-like permease family APS46_RS04925 PF00005 ABC transporter APS46_RS04925 PF12704 MacB-like periplasmic core domain APS46_RS04930 PF00313 'Cold-shock' DNA-binding domain APS46_RS04935 PF02617 ATP-dependent Clp protease adaptor protein ClpS APS46_RS04940 PF07724 AAA domain (Cdc48 subfamily) APS46_RS04940 PF00004 ATPase family associated with various cellular activities (AAA) APS46_RS04940 PF02861 Clp amino terminal domain, pathogenicity island component APS46_RS04940 PF10431 C-terminal, D2-small domain, of ClpB protein APS46_RS04940 PF17871 AAA lid domain APS46_RS04945 PF01797 Transposase IS200 like APS46_RS04970 PF00857 Isochorismatase family APS46_RS04975 PF05726 Pirin C-terminal cupin domain APS46_RS04975 PF02678 Pirin APS46_RS04980 PF03466 LysR substrate binding domain APS46_RS04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS04985 PF01176 Translation initiation factor 1A / IF-1 APS46_RS04995 PF03588 Leucyl/phenylalanyl-tRNA protein transferase APS46_RS05000 PF00664 ABC transporter transmembrane region APS46_RS05000 PF00005 ABC transporter APS46_RS05005 PF00664 ABC transporter transmembrane region APS46_RS05005 PF00005 ABC transporter APS46_RS05010 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS05015 PF01037 Lrp/AsnC ligand binding domain APS46_RS05020 PF01580 FtsK/SpoIIIE family APS46_RS05020 PF09397 Ftsk gamma domain APS46_RS05020 PF13491 4TM region of DNA translocase FtsK/SpoIIIE APS46_RS05020 PF17854 FtsK alpha domain APS46_RS05025 PF03548 Outer membrane lipoprotein carrier protein LolA APS46_RS05030 PF16193 AAA C-terminal domain APS46_RS05030 PF12002 MgsA AAA+ ATPase C terminal APS46_RS05030 PF00004 ATPase family associated with various cellular activities (AAA) APS46_RS05035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS46_RS05035 PF02403 Seryl-tRNA synthetase N-terminal domain APS46_RS05040 PF00384 Molybdopterin oxidoreductase APS46_RS05040 PF01568 Molydopterin dinucleotide binding domain APS46_RS05040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS05045 PF12800 4Fe-4S binding domain APS46_RS05045 PF13247 4Fe-4S dicluster domain APS46_RS05050 PF04976 DMSO reductase anchor subunit (DmsC) APS46_RS05060 PF07690 Major Facilitator Superfamily APS46_RS05065 PF13520 Amino acid permease APS46_RS05070 PF04055 Radical SAM superfamily APS46_RS05075 PF11047 Salmonella outer protein D APS46_RS05080 PF02901 Pyruvate formate lyase-like APS46_RS05080 PF01228 Glycine radical APS46_RS05085 PF01226 Formate/nitrite transporter APS46_RS05090 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding APS46_RS05090 PF18381 YcaO cyclodehydratase C-terminal domain APS46_RS05095 PF04239 Protein of unknown function (DUF421) APS46_RS05100 PF00266 Aminotransferase class-V APS46_RS05105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS46_RS05110 PF01435 Peptidase family M48 APS46_RS05115 PF02224 Cytidylate kinase APS46_RS05120 PF00575 S1 RNA binding domain APS46_RS05125 PF00216 Bacterial DNA-binding protein APS46_RS05130 PF00753 Metallo-beta-lactamase superfamily APS46_RS05130 PF03772 Competence protein APS46_RS05135 PF00664 ABC transporter transmembrane region APS46_RS05135 PF00005 ABC transporter APS46_RS05140 PF02606 Tetraacyldisaccharide-1-P 4'-kinase APS46_RS05145 PF06224 Winged helix DNA-binding domain APS46_RS05150 PF03966 Trm112p-like protein APS46_RS05155 PF02348 Cytidylyltransferase APS46_RS05160 PF01636 Phosphotransferase enzyme family APS46_RS05165 PF02698 DUF218 domain APS46_RS05170 PF13847 Methyltransferase domain APS46_RS05175 PF17192 MukF middle domain APS46_RS05175 PF17193 MukF C-terminal domain APS46_RS05175 PF03882 MukF winged-helix domain APS46_RS05180 PF04288 MukE-like family APS46_RS05185 PF16330 MukB hinge domain APS46_RS05185 PF04310 MukB N-terminal APS46_RS05190 PF01471 Putative peptidoglycan binding domain APS46_RS05190 PF03734 L,D-transpeptidase catalytic domain APS46_RS05195 PF05951 Bacterial protein of unknown function (DUF882) APS46_RS05200 PF00753 Metallo-beta-lactamase superfamily APS46_RS05205 PF00155 Aminotransferase class I and II APS46_RS05210 PF00267 Gram-negative porin APS46_RS05215 PF01336 OB-fold nucleic acid binding domain APS46_RS05215 PF00152 tRNA synthetases class II (D, K and N) APS46_RS05220 PF13404 AsnC-type helix-turn-helix domain APS46_RS05220 PF01037 Lrp/AsnC ligand binding domain APS46_RS05230 PF00291 Pyridoxal-phosphate dependent enzyme APS46_RS05235 PF01235 Sodium:alanine symporter family APS46_RS05240 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family APS46_RS05240 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain APS46_RS05245 PF12167 Arm DNA-binding domain APS46_RS05245 PF00589 Phage integrase family APS46_RS05260 PF02086 D12 class N6 adenine-specific DNA methyltransferase APS46_RS05320 PF06992 Replication protein P APS46_RS05350 PF06183 DinI-like family APS46_RS05375 PF03589 Antitermination protein APS46_RS05400 PF00959 Phage lysozyme APS46_RS05405 PF03245 Bacteriophage Rz lysis protein APS46_RS05430 PF00574 Clp protease APS46_RS05480 PF13505 Outer membrane protein beta-barrel domain APS46_RS05485 PF00080 Copper/zinc superoxide dismutase (SODC) APS46_RS05515 PF07484 Phage Tail Collar Domain APS46_RS05515 PF03335 Phage tail fibre repeat APS46_RS05525 PF02413 Caudovirales tail fibre assembly protein, lambda gpK APS46_RS05530 PF05364 Salmonella type III secretion SopE effector N-terminus APS46_RS05530 PF07487 SopE GEF domain APS46_RS05535 PF00239 Resolvase, N terminal domain APS46_RS05535 PF02796 Helix-turn-helix domain of resolvase APS46_RS05545 PF01433 Peptidase family M1 domain APS46_RS05545 PF17432 Domain of unknown function (DUF3458_C) ARM repeats APS46_RS05545 PF11940 Domain of unknown function (DUF3458) Ig-like fold APS46_RS05550 PF01180 Dihydroorotate dehydrogenase APS46_RS05555 PF07126 Cell-division protein ZapC APS46_RS05560 PF03473 MOSC domain APS46_RS05560 PF00111 2Fe-2S iron-sulfur cluster binding domain APS46_RS05560 PF03476 MOSC N-terminal beta barrel domain APS46_RS05565 PF10672 S-adenosylmethionine-dependent methyltransferase APS46_RS05565 PF01170 Putative RNA methylase family UPF0020 APS46_RS05565 PF02926 THUMP domain APS46_RS05570 PF12848 ABC transporter APS46_RS05570 PF16326 ABC transporter C-terminal domain APS46_RS05570 PF00005 ABC transporter APS46_RS05575 PF04403 Paraquat-inducible protein A APS46_RS05580 PF02470 MlaD protein APS46_RS05585 PF03886 ABC-type transport auxiliary lipoprotein component APS46_RS05590 PF04957 Ribosome modulation factor APS46_RS05595 PF07977 FabA-like domain APS46_RS05600 PF13654 AAA domain APS46_RS05600 PF05362 Lon protease (S16) C-terminal proteolytic domain APS46_RS05605 PF17414 MatP C-terminal ribbon-helix-helix domain APS46_RS05605 PF06303 MatP N-terminal domain APS46_RS05610 PF00691 OmpA family APS46_RS05610 PF01389 OmpA-like transmembrane domain APS46_RS05615 PF03846 Cell division inhibitor SulA APS46_RS05620 PF04993 TfoX N-terminal domain APS46_RS05620 PF04994 TfoX C-terminal domain APS46_RS05625 PF12805 FUSC-like inner membrane protein yccS APS46_RS05630 PF03733 Inner membrane component domain APS46_RS05635 PF13361 UvrD-like helicase C-terminal domain APS46_RS05635 PF12462 DNA helicase IV / RNA helicase N terminal APS46_RS05635 PF00580 UvrD/REP helicase N-terminal domain APS46_RS05640 PF02142 MGS-like domain APS46_RS05645 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) APS46_RS05650 PF13380 CoA binding domain APS46_RS05655 PF08755 Hemimethylated DNA-binding protein YccV like APS46_RS05660 PF17785 PUA-like domain APS46_RS05660 PF10672 S-adenosylmethionine-dependent methyltransferase APS46_RS05665 PF01161 Phosphatidylethanolamine-binding protein APS46_RS05670 PF12833 Helix-turn-helix domain APS46_RS05675 PF00708 Acylphosphatase APS46_RS05680 PF04358 DsrC like protein APS46_RS05685 PF01027 Inhibitor of apoptosis-promoting Bax1 APS46_RS05700 PF00805 Pentapeptide repeats (8 copies) APS46_RS05710 PF07824 Type III secretion chaperone domain APS46_RS05715 PF05925 Enterobacterial virulence protein IpgD APS46_RS05720 PF13132 Domain of unknown function (DUF3950) APS46_RS05730 PF03577 Peptidase family C69 APS46_RS05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS05735 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS05745 PF00576 HIUase/Transthyretin family APS46_RS05750 PF01613 Flavin reductase like domain APS46_RS05755 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal APS46_RS05755 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal APS46_RS05760 PF01047 MarR family APS46_RS05765 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS46_RS05770 PF00171 Aldehyde dehydrogenase family APS46_RS05775 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase APS46_RS05780 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase APS46_RS05785 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS46_RS05790 PF03328 HpcH/HpaI aldolase/citrate lyase family APS46_RS05795 PF07690 Major Facilitator Superfamily APS46_RS05805 PF12706 Beta-lactamase superfamily domain APS46_RS05820 PF01556 DnaJ C terminal domain APS46_RS05820 PF00226 DnaJ domain APS46_RS05830 PF11412 Disulphide bond corrector protein DsbC APS46_RS05830 PF02683 Cytochrome C biogenesis protein transmembrane region APS46_RS05830 PF13098 Thioredoxin-like domain APS46_RS05835 PF06965 Na+/H+ antiporter 1 APS46_RS05835 PF13462 Thioredoxin APS46_RS05840 PF00578 AhpC/TSA family APS46_RS05845 PF00328 Histidine phosphatase superfamily (branch 2) APS46_RS05850 PF13993 YccJ-like protein APS46_RS05855 PF03358 NADPH-dependent FMN reductase APS46_RS05860 PF10685 Stress-induced bacterial acidophilic repeat motif APS46_RS05865 PF08362 YcdC-like protein, C-terminal region APS46_RS05865 PF00440 Bacterial regulatory proteins, tetR family APS46_RS05875 PF00171 Aldehyde dehydrogenase family APS46_RS05875 PF14850 DNA-binding domain of Proline dehydrogenase APS46_RS05875 PF18327 Proline utilization A proline dehydrogenase N-terminal domain APS46_RS05875 PF01619 Proline dehydrogenase APS46_RS05880 PF00474 Sodium:solute symporter family APS46_RS05890 PF02562 PhoH-like protein APS46_RS05895 PF01418 Helix-turn-helix domain, rpiR family APS46_RS05895 PF01380 SIS domain APS46_RS05900 PF00474 Sodium:solute symporter family APS46_RS05905 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase APS46_RS05910 PF01344 Kelch motif APS46_RS05915 PF06178 Oligogalacturonate-specific porin protein (KdgM) APS46_RS05920 PF07690 Major Facilitator Superfamily APS46_RS05925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS46_RS05925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS46_RS05945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS46_RS05950 PF02811 PHP domain APS46_RS05955 PF02613 Nitrate reductase delta subunit APS46_RS05960 PF06496 Protein of unknown function (DUF1097) APS46_RS05965 PF03783 Curli production assembly/transport component CsgG APS46_RS05970 PF10614 Type VIII secretion system (T8SS), CsgF protein APS46_RS05975 PF10627 Curli assembly protein CsgE APS46_RS05980 PF00196 Bacterial regulatory proteins, luxR family APS46_RS05985 PF07012 Curlin associated repeat APS46_RS05990 PF07012 Curlin associated repeat APS46_RS05995 PF10610 Thin aggregative fimbriae synthesis protein APS46_RS06005 PF01661 Macro domain APS46_RS06010 PF13091 PLD-like domain APS46_RS06015 PF01757 Acyltransferase family APS46_RS06020 PF04349 Periplasmic glucan biosynthesis protein, MdoG APS46_RS06025 PF00535 Glycosyl transferase family 2 APS46_RS06030 PF07119 Protein of unknown function (DUF1375) APS46_RS06035 PF13984 MsyB protein APS46_RS06040 PF07690 Major Facilitator Superfamily APS46_RS06045 PF03279 Bacterial lipid A biosynthesis acyltransferase APS46_RS06050 PF12368 Rhodanase C-terminal APS46_RS06050 PF17773 UPF0176 acylphosphatase like domain APS46_RS06050 PF00581 Rhodanese-like domain APS46_RS06055 PF04264 YceI-like domain APS46_RS06060 PF01292 Prokaryotic cytochrome b561 APS46_RS06065 PF10968 Protein of unknown function (DUF2770) APS46_RS06070 PF01266 FAD dependent oxidoreductase APS46_RS06075 PF13991 BssS protein family APS46_RS06080 PF06183 DinI-like family APS46_RS06085 PF01979 Amidohydrolase family APS46_RS06090 PF07273 Protein of unknown function (DUF1439) APS46_RS06095 PF04399 Glutaredoxin 2, C terminal domain APS46_RS06095 PF13417 Glutathione S-transferase, N-terminal domain APS46_RS06100 PF07690 Major Facilitator Superfamily APS46_RS06105 PF13302 Acetyltransferase (GNAT) domain APS46_RS06110 PF04337 Protein of unknown function, DUF480 APS46_RS06115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS46_RS06120 PF03023 Lipid II flippase MurJ APS46_RS06125 PF05130 FlgN protein APS46_RS06130 PF04316 Anti-sigma-28 factor, FlgM APS46_RS06135 PF13144 Chaperone for flagella basal body P-ring formation APS46_RS06140 PF00460 Flagella basal body rod protein APS46_RS06145 PF00460 Flagella basal body rod protein APS46_RS06145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS46_RS06150 PF13861 FlgD Tudor-like domain APS46_RS06150 PF13860 FlgD Ig-like domain APS46_RS06150 PF03963 Flagellar hook capping protein - N-terminal region APS46_RS06155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS46_RS06155 PF00460 Flagella basal body rod protein APS46_RS06155 PF07559 Flagellar basal body protein FlaE APS46_RS06160 PF00460 Flagella basal body rod protein APS46_RS06160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS46_RS06165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS46_RS06165 PF00460 Flagella basal body rod protein APS46_RS06170 PF02107 Flagellar L-ring protein APS46_RS06175 PF02119 Flagellar P-ring protein APS46_RS06180 PF10135 Rod binding protein APS46_RS06180 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase APS46_RS06185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APS46_RS06185 PF00460 Flagella basal body rod protein APS46_RS06190 PF00669 Bacterial flagellin N-terminal helical region APS46_RS06195 PF12111 Polyribonucleotide phosphorylase C terminal APS46_RS06195 PF10150 Ribonuclease E/G family APS46_RS06195 PF00575 S1 RNA binding domain APS46_RS06205 PF01479 S4 domain APS46_RS06205 PF00849 RNA pseudouridylate synthase APS46_RS06220 PF02545 Maf-like protein APS46_RS06225 PF02620 Large ribosomal RNA subunit accumulation protein YceD APS46_RS06230 PF01783 Ribosomal L32p protein family APS46_RS06235 PF02504 Fatty acid synthesis protein APS46_RS06240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APS46_RS06240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APS46_RS06245 PF00698 Acyl transferase domain APS46_RS06255 PF00550 Phosphopantetheine attachment site APS46_RS06260 PF02801 Beta-ketoacyl synthase, C-terminal domain APS46_RS06260 PF00109 Beta-ketoacyl synthase, N-terminal domain APS46_RS06265 PF01063 Amino-transferase class IV APS46_RS06270 PF02618 YceG-like family APS46_RS06275 PF02223 Thymidylate kinase APS46_RS06280 PF09115 DNA polymerase III, delta subunit, C terminal APS46_RS06285 PF01026 TatD related DNase APS46_RS06290 PF00367 phosphotransferase system, EIIB APS46_RS06290 PF02378 Phosphotransferase system, EIIC APS46_RS06295 PF07715 TonB-dependent Receptor Plug Domain APS46_RS06295 PF00593 TonB dependent receptor APS46_RS06300 PF01230 HIT domain APS46_RS06305 PF07233 Protein of unknown function (DUF1425) APS46_RS06310 PF13036 Peptidoglycan-synthase activator LpoB APS46_RS06315 PF01636 Phosphotransferase enzyme family APS46_RS06320 PF00933 Glycosyl hydrolase family 3 N terminal domain APS46_RS06325 PF05728 Uncharacterised protein family (UPF0227) APS46_RS06330 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS06335 PF05433 Glycine zipper 2TM domain APS46_RS06340 PF00440 Bacterial regulatory proteins, tetR family APS46_RS06345 PF07338 Protein of unknown function (DUF1471) APS46_RS06350 PF17969 L,D-transpeptidase C-terminal domain APS46_RS06350 PF03734 L,D-transpeptidase catalytic domain APS46_RS06350 PF01476 LysM domain APS46_RS06355 PF02559 CarD-like/TRCF domain APS46_RS06355 PF00270 DEAD/DEAH box helicase APS46_RS06355 PF17757 UvrB interaction domain APS46_RS06355 PF03461 TRCF domain APS46_RS06355 PF00271 Helicase conserved C-terminal domain APS46_RS06360 PF12704 MacB-like periplasmic core domain APS46_RS06360 PF02687 FtsX-like permease family APS46_RS06365 PF00005 ABC transporter APS46_RS06370 PF02687 FtsX-like permease family APS46_RS06370 PF12704 MacB-like periplasmic core domain APS46_RS06375 PF00480 ROK family APS46_RS06380 PF02146 Sir2 family APS46_RS06385 PF13416 Bacterial extracellular solute-binding protein APS46_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS06395 PF06767 Sif protein APS46_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS06405 PF08402 TOBE domain APS46_RS06405 PF00005 ABC transporter APS46_RS06410 PF07687 Peptidase dimerisation domain APS46_RS06410 PF01546 Peptidase family M20/M25/M40 APS46_RS06420 PF08007 Cupin superfamily protein APS46_RS06425 PF08918 PhoQ Sensor APS46_RS06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS06430 PF00072 Response regulator receiver domain APS46_RS06430 PF00486 Transcriptional regulatory protein, C terminal APS46_RS06435 PF08328 Adenylosuccinate lyase C-terminal APS46_RS06435 PF00206 Lyase APS46_RS06440 PF04356 Protein of unknown function (DUF489) APS46_RS06450 PF00293 NUDIX domain APS46_RS06460 PF00849 RNA pseudouridylate synthase APS46_RS06465 PF00180 Isocitrate/isopropylmalate dehydrogenase APS46_RS06470 PF01797 Transposase IS200 like APS46_RS06490 PF06183 DinI-like family APS46_RS06495 PF00652 Ricin-type beta-trefoil lectin domain APS46_RS06500 PF00313 'Cold-shock' DNA-binding domain APS46_RS06520 PF06316 Enterobacterial Ail/Lom protein APS46_RS06560 PF00011 Hsp20/alpha crystallin family APS46_RS06575 PF01292 Prokaryotic cytochrome b561 APS46_RS06585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS46_RS06590 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS06595 PF12911 N-terminal TM domain of oligopeptide transport permease C APS46_RS06600 PF00005 ABC transporter APS46_RS06605 PF00005 ABC transporter APS46_RS06610 PF00924 Mechanosensitive ion channel APS46_RS06625 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment APS46_RS06630 PF01909 Nucleotidyltransferase domain APS46_RS06630 PF13427 Domain of unknown function (DUF4111) APS46_RS06640 PF09278 MerR, DNA binding APS46_RS06640 PF00376 MerR family regulatory protein APS46_RS06655 PF01817 Chorismate mutase type II APS46_RS06660 PF01810 LysE type translocator APS46_RS06665 PF09313 Domain of unknown function (DUF1971) APS46_RS06670 PF08956 Domain of unknown function (DUF1869) APS46_RS06685 PF04226 Transglycosylase associated protein APS46_RS06690 PF03891 Domain of unknown function (DUF333) APS46_RS06700 PF04343 Protein of unknown function, DUF488 APS46_RS06705 PF07690 Major Facilitator Superfamily APS46_RS06710 PF02311 AraC-like ligand binding domain APS46_RS06710 PF12833 Helix-turn-helix domain APS46_RS06715 PF04284 Protein of unknown function (DUF441) APS46_RS06725 PF04073 Aminoacyl-tRNA editing domain APS46_RS06730 PF00990 Diguanylate cyclase, GGDEF domain APS46_RS06730 PF17155 Gammaproteobacterial periplasmic sensor domain APS46_RS06735 PF04285 Protein of unknown function (DUF444) APS46_RS06740 PF08298 PrkA AAA domain APS46_RS06740 PF06798 PrkA serine protein kinase C-terminal domain APS46_RS06745 PF06629 MltA-interacting protein MipA APS46_RS06750 PF13186 Iron-sulfur cluster-binding domain APS46_RS06750 PF04055 Radical SAM superfamily APS46_RS06755 PF00248 Aldo/keto reductase family APS46_RS06760 PF01263 Aldose 1-epimerase APS46_RS06765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APS46_RS06765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APS46_RS06770 PF01641 SelR domain APS46_RS06775 PF07023 Protein of unknown function (DUF1315) APS46_RS06780 PF00857 Isochorismatase family APS46_RS06785 PF17763 Glutaminase/Asparaginase C-terminal domain APS46_RS06785 PF00710 Asparaginase, N-terminal APS46_RS06790 PF01343 Peptidase family S49 APS46_RS06795 PF00881 Nitroreductase family APS46_RS06800 PF02769 AIR synthase related protein, C-terminal domain APS46_RS06800 PF00586 AIR synthase related protein, N-terminal domain APS46_RS06805 PF01131 DNA topoisomerase APS46_RS06805 PF01751 Toprim domain APS46_RS06810 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain APS46_RS06810 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APS46_RS06815 PF07383 Protein of unknown function (DUF1496) APS46_RS06820 PF00293 NUDIX domain APS46_RS06825 PF03372 Endonuclease/Exonuclease/phosphatase family APS46_RS06830 PF00202 Aminotransferase class-III APS46_RS06835 PF04958 Arginine N-succinyltransferase beta subunit APS46_RS06840 PF00171 Aldehyde dehydrogenase family APS46_RS06845 PF04996 Succinylarginine dihydrolase APS46_RS06850 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family APS46_RS06855 PF07813 LTXXQ motif family protein APS46_RS06865 PF02540 NAD synthase APS46_RS06870 PF04355 SmpA / OmlA family APS46_RS06875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS06880 PF02378 Phosphotransferase system, EIIC APS46_RS06885 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit APS46_RS06890 PF12833 Helix-turn-helix domain APS46_RS06890 PF07883 Cupin domain APS46_RS06895 PF11975 Family 4 glycosyl hydrolase C-terminal domain APS46_RS06895 PF02056 Family 4 glycosyl hydrolase APS46_RS06900 PF04794 YdjC-like protein APS46_RS06905 PF00199 Catalase APS46_RS06905 PF18011 C-terminal domain found in long catalases APS46_RS06905 PF06628 Catalase-related immune-responsive APS46_RS06910 PF10729 Cell division activator CedA APS46_RS06915 PF00375 Sodium:dicarboxylate symporter family APS46_RS06920 PF04307 LexA-binding, inner membrane-associated putative hydrolase APS46_RS06925 PF13419 Haloacid dehalogenase-like hydrolase APS46_RS06930 PF14002 YniB-like protein APS46_RS06935 PF03881 Fructosamine kinase APS46_RS06940 PF11080 Endoribonuclease GhoS APS46_RS06945 PF00294 pfkB family carbohydrate kinase APS46_RS06950 PF04338 Protein of unknown function, DUF481 APS46_RS06965 PF01223 DNA/RNA non-specific endonuclease APS46_RS06980 PF03129 Anticodon binding domain APS46_RS06980 PF02824 TGS domain APS46_RS06980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS46_RS06980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS46_RS06985 PF05198 Translation initiation factor IF-3, N-terminal domain APS46_RS06985 PF00707 Translation initiation factor IF-3, C-terminal domain APS46_RS06990 PF01632 Ribosomal protein L35 APS46_RS06995 PF00453 Ribosomal protein L20 APS46_RS07000 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APS46_RS07000 PF01409 tRNA synthetases class II core domain (F) APS46_RS07005 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain APS46_RS07005 PF01588 Putative tRNA binding domain APS46_RS07005 PF03147 Ferredoxin-fold anticodon binding domain APS46_RS07005 PF03484 tRNA synthetase B5 domain APS46_RS07005 PF03483 B3/4 domain APS46_RS07010 PF00216 Bacterial DNA-binding protein APS46_RS07015 PF01032 FecCD transport family APS46_RS07020 PF00255 Glutathione peroxidase APS46_RS07025 PF00005 ABC transporter APS46_RS07030 PF00877 NlpC/P60 family APS46_RS07035 PF00563 EAL domain APS46_RS07040 PF02696 Uncharacterized ACR, YdiU/UPF0061 family APS46_RS07045 PF10636 Hemin uptake protein hemP APS46_RS07050 PF00793 DAHP synthetase I family APS46_RS07055 PF03618 Kinase/pyrophosphorylase APS46_RS07060 PF00391 PEP-utilising enzyme, mobile domain APS46_RS07060 PF02896 PEP-utilising enzyme, TIM barrel domain APS46_RS07060 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain APS46_RS07065 PF00501 AMP-binding enzyme APS46_RS07065 PF13193 AMP-binding enzyme C-terminal domain APS46_RS07075 PF01494 FAD binding domain APS46_RS07080 PF00766 Electron transfer flavoprotein FAD-binding domain APS46_RS07080 PF01012 Electron transfer flavoprotein domain APS46_RS07085 PF01012 Electron transfer flavoprotein domain APS46_RS07090 PF12833 Helix-turn-helix domain APS46_RS07090 PF02311 AraC-like ligand binding domain APS46_RS07095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS46_RS07095 PF02770 Acyl-CoA dehydrogenase, middle domain APS46_RS07095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS46_RS07100 PF01144 Coenzyme A transferase APS46_RS07105 PF01487 Type I 3-dehydroquinase APS46_RS07110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain APS46_RS07110 PF08501 Shikimate dehydrogenase substrate binding domain APS46_RS07115 PF07690 Major Facilitator Superfamily APS46_RS07120 PF07690 Major Facilitator Superfamily APS46_RS07125 PF08965 Domain of unknown function (DUF1870) APS46_RS07135 PF01594 AI-2E family transporter APS46_RS07140 PF02913 FAD linked oxidases, C-terminal domain APS46_RS07140 PF01565 FAD binding domain APS46_RS07140 PF13183 4Fe-4S dicluster domain APS46_RS07145 PF03061 Thioesterase superfamily APS46_RS07150 PF15930 Domain of unknown function APS46_RS07155 PF00375 Sodium:dicarboxylate symporter family APS46_RS07160 PF01521 Iron-sulphur cluster biosynthesis APS46_RS07165 PF01458 Uncharacterized protein family (UPF0051) APS46_RS07170 PF00005 ABC transporter APS46_RS07175 PF01458 Uncharacterized protein family (UPF0051) APS46_RS07180 PF00266 Aminotransferase class-V APS46_RS07185 PF02657 Fe-S metabolism associated domain APS46_RS07190 PF01476 LysM domain APS46_RS07190 PF03734 L,D-transpeptidase catalytic domain APS46_RS07190 PF17969 L,D-transpeptidase C-terminal domain APS46_RS07195 PF04728 Lipoprotein leucine-zipper APS46_RS07200 PF04728 Lipoprotein leucine-zipper APS46_RS07205 PF04728 Lipoprotein leucine-zipper APS46_RS07210 PF02887 Pyruvate kinase, alpha/beta domain APS46_RS07210 PF00224 Pyruvate kinase, barrel domain APS46_RS07215 PF00324 Amino acid permease APS46_RS07220 PF00561 alpha/beta hydrolase fold APS46_RS07230 PF00294 pfkB family carbohydrate kinase APS46_RS07235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS07235 PF00384 Molybdopterin oxidoreductase APS46_RS07235 PF01568 Molydopterin dinucleotide binding domain APS46_RS07240 PF03916 Polysulphide reductase, NrfD APS46_RS07245 PF13247 4Fe-4S dicluster domain APS46_RS07250 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS07255 PF00196 Bacterial regulatory proteins, luxR family APS46_RS07255 PF00072 Response regulator receiver domain APS46_RS07260 PF10965 Protein of unknown function (DUF2767) APS46_RS07265 PF08349 Protein of unknown function (DUF1722) APS46_RS07270 PF13411 MerR HTH family regulatory protein APS46_RS07275 PF00196 Bacterial regulatory proteins, luxR family APS46_RS07275 PF00072 Response regulator receiver domain APS46_RS07280 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS07280 PF01627 Hpt domain APS46_RS07280 PF00672 HAMP domain APS46_RS07280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) APS46_RS07280 PF00072 Response regulator receiver domain APS46_RS07280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS07290 PF03958 Bacterial type II/III secretion system short domain APS46_RS07290 PF00263 Bacterial type II and III secretion system protein APS46_RS07310 PF03433 EspA-like secreted protein APS46_RS07320 PF04888 Secretion system effector C (SseC) like family APS46_RS07325 PF05802 Enterobacterial EspB protein APS46_RS07365 PF01514 Secretory protein of YscJ/FliF family APS46_RS07380 PF07201 HrpJ-like domain APS46_RS07390 PF00771 FHIPEP family APS46_RS07395 PF18269 T3SS EscN ATPase C-terminal domain APS46_RS07395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS46_RS07410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APS46_RS07415 PF00813 FliP family APS46_RS07420 PF01313 Bacterial export proteins, family 3 APS46_RS07425 PF01311 Bacterial export proteins, family 1 APS46_RS07430 PF01312 FlhB HrpN YscU SpaS Family APS46_RS07445 PF01554 MatE APS46_RS07450 PF00677 Lumazine binding domain APS46_RS07460 PF07690 Major Facilitator Superfamily APS46_RS07465 PF03466 LysR substrate binding domain APS46_RS07465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS07470 PF00356 Bacterial regulatory proteins, lacI family APS46_RS07475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APS46_RS07475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APS46_RS07480 PF00877 NlpC/P60 family APS46_RS07485 PF00462 Glutaredoxin APS46_RS07490 PF00929 Exonuclease APS46_RS07495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS46_RS07500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APS46_RS07505 PF16925 Tetracyclin repressor-like, C-terminal domain APS46_RS07505 PF00440 Bacterial regulatory proteins, tetR family APS46_RS07510 PF06945 Protein of unknown function (DUF1289) APS46_RS07515 PF00248 Aldo/keto reductase family APS46_RS07520 PF00080 Copper/zinc superoxide dismutase (SODC) APS46_RS07525 PF04632 Fusaric acid resistance protein family APS46_RS07530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS46_RS07530 PF00529 HlyD membrane-fusion protein of T1SS APS46_RS07535 PF07869 Protein of unknown function (DUF1656) APS46_RS07540 PF01047 MarR family APS46_RS07545 PF05433 Glycine zipper 2TM domain APS46_RS07550 PF03702 Anhydro-N-acetylmuramic acid kinase APS46_RS07555 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme APS46_RS07560 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region APS46_RS07560 PF01243 Pyridoxamine 5'-phosphate oxidase APS46_RS07565 PF01479 S4 domain APS46_RS07565 PF00579 tRNA synthetases class I (W and Y) APS46_RS07570 PF08543 Phosphomethylpyrimidine kinase APS46_RS07575 PF00043 Glutathione S-transferase, C-terminal domain APS46_RS07575 PF02798 Glutathione S-transferase, N-terminal domain APS46_RS07580 PF00854 POT family APS46_RS07585 PF00633 Helix-hairpin-helix motif APS46_RS07585 PF10576 Iron-sulfur binding domain of endonuclease III APS46_RS07585 PF00730 HhH-GPD superfamily base excision DNA repair protein APS46_RS07590 PF02508 Rnf-Nqr subunit, membrane protein APS46_RS07595 PF04205 FMN-binding domain APS46_RS07600 PF03116 NQR2, RnfD, RnfE family APS46_RS07605 PF13375 RnfC Barrel sandwich hybrid domain APS46_RS07605 PF10531 SLBB domain APS46_RS07605 PF12838 4Fe-4S dicluster domain APS46_RS07605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APS46_RS07610 PF04060 Putative Fe-S cluster APS46_RS07615 PF02508 Rnf-Nqr subunit, membrane protein APS46_RS07620 PF10754 Protein of unknown function (DUF2569) APS46_RS07625 PF05321 Haemolysin expression modulating protein APS46_RS07635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS46_RS07635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS46_RS07640 PF00962 Adenosine/AMP deaminase APS46_RS07645 PF06097 Bacterial protein of unknown function (DUF945) APS46_RS07650 PF01238 Phosphomannose isomerase type I APS46_RS07655 PF05683 Fumarase C-terminus APS46_RS07655 PF05681 Fumarate hydratase (Fumerase) APS46_RS07660 PF00206 Lyase APS46_RS07660 PF10415 Fumarase C C-terminus APS46_RS07665 PF05472 DNA replication terminus site-binding protein (Ter protein) APS46_RS07670 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS07670 PF00672 HAMP domain APS46_RS07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS07675 PF13382 Adenine deaminase C-terminal domain APS46_RS07675 PF01979 Amidohydrolase family APS46_RS07680 PF00267 Gram-negative porin APS46_RS07690 PF00486 Transcriptional regulatory protein, C terminal APS46_RS07690 PF00072 Response regulator receiver domain APS46_RS07695 PF06942 GlpM protein APS46_RS07700 PF13520 Amino acid permease APS46_RS07705 PF07338 Protein of unknown function (DUF1471) APS46_RS07710 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APS46_RS07710 PF05222 Alanine dehydrogenase/PNT, N-terminal domain APS46_RS07710 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch APS46_RS07715 PF02233 NAD(P) transhydrogenase beta subunit APS46_RS07720 PF01594 AI-2E family transporter APS46_RS07725 PF00893 Small Multidrug Resistance protein APS46_RS07730 PF00893 Small Multidrug Resistance protein APS46_RS07735 PF00089 Trypsin APS46_RS07745 PF07690 Major Facilitator Superfamily APS46_RS07750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS07750 PF03466 LysR substrate binding domain APS46_RS07755 PF00480 ROK family APS46_RS07765 PF00654 Voltage gated chloride channel APS46_RS07770 PF00571 CBS domain APS46_RS07770 PF00005 ABC transporter APS46_RS07775 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS07780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APS46_RS07785 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS07790 PF02613 Nitrate reductase delta subunit APS46_RS07795 PF04976 DMSO reductase anchor subunit (DmsC) APS46_RS07800 PF12800 4Fe-4S binding domain APS46_RS07800 PF13247 4Fe-4S dicluster domain APS46_RS07805 PF01568 Molydopterin dinucleotide binding domain APS46_RS07805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS07805 PF00384 Molybdopterin oxidoreductase APS46_RS07810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS07810 PF01568 Molydopterin dinucleotide binding domain APS46_RS07810 PF00384 Molybdopterin oxidoreductase APS46_RS07815 PF06649 Protein of unknown function (DUF1161) APS46_RS07820 PF06788 Uncharacterised protein family (UPF0257) APS46_RS07825 PF13302 Acetyltransferase (GNAT) domain APS46_RS07830 PF06932 Protein of unknown function (DUF1283) APS46_RS07835 PF02694 Uncharacterised BCR, YnfA/UPF0060 family APS46_RS07840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS46_RS07840 PF13378 Enolase C-terminal domain-like APS46_RS07845 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS07845 PF00107 Zinc-binding dehydrogenase APS46_RS07850 PF00083 Sugar (and other) transporter APS46_RS07850 PF07690 Major Facilitator Superfamily APS46_RS07855 PF08125 Mannitol dehydrogenase C-terminal domain APS46_RS07855 PF01232 Mannitol dehydrogenase Rossmann domain APS46_RS07860 PF14001 YdfZ protein APS46_RS07865 PF07729 FCD domain APS46_RS07865 PF00392 Bacterial regulatory proteins, gntR family APS46_RS07870 PF00106 short chain dehydrogenase APS46_RS07875 PF01432 Peptidase family M3 APS46_RS07880 PF10685 Stress-induced bacterial acidophilic repeat motif APS46_RS07885 PF02464 Competence-damaged protein APS46_RS07890 PF04076 Bacterial OB fold (BOF) protein APS46_RS07900 PF07690 Major Facilitator Superfamily APS46_RS07905 PF00892 EamA-like transporter family APS46_RS07910 PF13999 MarB protein APS46_RS07915 PF12833 Helix-turn-helix domain APS46_RS07920 PF01047 MarR family APS46_RS07925 PF01914 MarC family integral membrane protein APS46_RS07930 PF07690 Major Facilitator Superfamily APS46_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS07935 PF03466 LysR substrate binding domain APS46_RS07940 PF00171 Aldehyde dehydrogenase family APS46_RS07945 PF04960 Glutaminase APS46_RS07950 PF13811 Domain of unknown function (DUF4186) APS46_RS07955 PF01062 Bestrophin, RFP-TM, chloride channel APS46_RS07965 PF00267 Gram-negative porin APS46_RS07970 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA APS46_RS07980 PF04809 HupH hydrogenase expression protein, C-terminal conserved region APS46_RS07990 PF01455 HupF/HypC family APS46_RS07995 PF01750 Hydrogenase maturation protease APS46_RS08000 PF01292 Prokaryotic cytochrome b561 APS46_RS08005 PF00374 Nickel-dependent hydrogenase APS46_RS08010 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal APS46_RS08010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APS46_RS08020 PF00392 Bacterial regulatory proteins, gntR family APS46_RS08020 PF07729 FCD domain APS46_RS08025 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS08025 PF00107 Zinc-binding dehydrogenase APS46_RS08030 PF07690 Major Facilitator Superfamily APS46_RS08040 PF07690 Major Facilitator Superfamily APS46_RS08045 PF01494 FAD binding domain APS46_RS08055 PF02547 Queuosine biosynthesis protein APS46_RS08060 PF01042 Endoribonuclease L-PSP APS46_RS08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS08100 PF03466 LysR substrate binding domain APS46_RS08105 PF03060 Nitronate monooxygenase APS46_RS08110 PF00356 Bacterial regulatory proteins, lacI family APS46_RS08115 PF03553 Na+/H+ antiporter family APS46_RS08120 PF00155 Aminotransferase class I and II APS46_RS08125 PF00128 Alpha amylase, catalytic domain APS46_RS08125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS46_RS08130 PF00128 Alpha amylase, catalytic domain APS46_RS08135 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS46_RS08135 PF00128 Alpha amylase, catalytic domain APS46_RS08135 PF11941 Domain of unknown function (DUF3459) APS46_RS08145 PF06411 HdeA/HdeB family APS46_RS08150 PF02566 OsmC-like protein APS46_RS08155 PF10684 Putative biofilm-dependent modulation protein APS46_RS08160 PF08136 30S ribosomal protein subunit S22 family APS46_RS08165 PF00390 Malic enzyme, N-terminal domain APS46_RS08165 PF03949 Malic enzyme, NAD binding domain APS46_RS08170 PF00107 Zinc-binding dehydrogenase APS46_RS08170 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS08175 PF01292 Prokaryotic cytochrome b561 APS46_RS08180 PF12800 4Fe-4S binding domain APS46_RS08180 PF13247 4Fe-4S dicluster domain APS46_RS08180 PF09163 Formate dehydrogenase N, transmembrane APS46_RS08185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS08185 PF00384 Molybdopterin oxidoreductase APS46_RS08185 PF01568 Molydopterin dinucleotide binding domain APS46_RS08190 PF00384 Molybdopterin oxidoreductase APS46_RS08190 PF01568 Molydopterin dinucleotide binding domain APS46_RS08190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS08195 PF00892 EamA-like transporter family APS46_RS08200 PF00267 Gram-negative porin APS46_RS08210 PF07690 Major Facilitator Superfamily APS46_RS08220 PF07690 Major Facilitator Superfamily APS46_RS08225 PF14710 Respiratory nitrate reductase alpha N-terminal APS46_RS08225 PF00384 Molybdopterin oxidoreductase APS46_RS08225 PF01568 Molydopterin dinucleotide binding domain APS46_RS08230 PF13247 4Fe-4S dicluster domain APS46_RS08230 PF14711 Respiratory nitrate reductase beta C-terminal APS46_RS08235 PF02613 Nitrate reductase delta subunit APS46_RS08240 PF02665 Nitrate reductase gamma subunit APS46_RS08245 PF02567 Phenazine biosynthesis-like protein APS46_RS08250 PF00797 N-acetyltransferase APS46_RS08260 PF00324 Amino acid permease APS46_RS08265 PF06004 Bacterial protein of unknown function (DUF903) APS46_RS08275 PF00593 TonB dependent receptor APS46_RS08275 PF07715 TonB-dependent Receptor Plug Domain APS46_RS08280 PF07729 FCD domain APS46_RS08280 PF00392 Bacterial regulatory proteins, gntR family APS46_RS08285 PF00107 Zinc-binding dehydrogenase APS46_RS08285 PF16884 N-terminal domain of oxidoreductase APS46_RS08295 PF04657 Putative inner membrane exporter, YdcZ APS46_RS08300 PF10735 Protein of unknown function (DUF2526) APS46_RS08320 PF10753 Toxin GhoT_OrtT APS46_RS08325 PF00171 Aldehyde dehydrogenase family APS46_RS08330 PF00155 Aminotransferase class I and II APS46_RS08330 PF00392 Bacterial regulatory proteins, gntR family APS46_RS08335 PF01427 D-ala-D-ala dipeptidase APS46_RS08350 PF06767 Sif protein APS46_RS08355 PF10829 Protein of unknown function (DUF2554) APS46_RS08360 PF01136 Peptidase family U32 APS46_RS08360 PF12392 Collagenase APS46_RS08365 PF01381 Helix-turn-helix APS46_RS08365 PF07883 Cupin domain APS46_RS08370 PF03594 Benzoate membrane transport protein APS46_RS08375 PF11769 Protein of unknown function (DUF3313) APS46_RS08380 PF03848 Tellurite resistance protein TehB APS46_RS08385 PF03595 Voltage-dependent anion channel APS46_RS08390 PF18836 Beta solenoid repeat from YDCK APS46_RS08395 PF13302 Acetyltransferase (GNAT) domain APS46_RS08400 PF05343 M42 glutamyl aminopeptidase APS46_RS08405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS08410 PF03611 PTS system sugar-specific permease component APS46_RS08415 PF03437 BtpA family APS46_RS08420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS08425 PF00834 Ribulose-phosphate 3 epimerase family APS46_RS08430 PF08220 DeoR-like helix-turn-helix domain APS46_RS08430 PF00455 DeoR C terminal sensor domain APS46_RS08435 PF00583 Acetyltransferase (GNAT) family APS46_RS08440 PF01070 FMN-dependent dehydrogenase APS46_RS08445 PF04264 YceI-like domain APS46_RS08450 PF04349 Periplasmic glucan biosynthesis protein, MdoG APS46_RS08455 PF00135 Carboxylesterase family APS46_RS08460 PF07063 Domain of unknown function (DUF1338) APS46_RS08465 PF03466 LysR substrate binding domain APS46_RS08465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS08470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS46_RS08470 PF00672 HAMP domain APS46_RS08470 PF02203 Tar ligand binding domain homologue APS46_RS08475 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS08475 PF00107 Zinc-binding dehydrogenase APS46_RS08480 PF02583 Metal-sensitive transcriptional repressor APS46_RS08490 PF00657 GDSL-like Lipase/Acylhydrolase APS46_RS08490 PF06767 Sif protein APS46_RS08500 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS46_RS08505 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS08510 PF00005 ABC transporter APS46_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS08525 PF08242 Methyltransferase domain APS46_RS08530 PF01292 Prokaryotic cytochrome b561 APS46_RS08535 PF02698 DUF218 domain APS46_RS08540 PF11898 Domain of unknown function (DUF3418) APS46_RS08540 PF04408 Helicase associated domain (HA2) APS46_RS08540 PF00271 Helicase conserved C-terminal domain APS46_RS08540 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold APS46_RS08540 PF00270 DEAD/DEAH box helicase APS46_RS08545 PF02525 Flavodoxin-like fold APS46_RS08555 PF07027 Protein of unknown function (DUF1318) APS46_RS08560 PF13617 YnbE-like lipoprotein APS46_RS08565 PF11739 Dicarboxylate transport APS46_RS08570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS46_RS08570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS46_RS08575 PF03724 META domain APS46_RS08580 PF03891 Domain of unknown function (DUF333) APS46_RS08590 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II APS46_RS08590 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase APS46_RS08590 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg APS46_RS08590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS46_RS08590 PF10371 Domain of unknown function APS46_RS08600 PF00582 Universal stress protein family APS46_RS08605 PF00893 Small Multidrug Resistance protein APS46_RS08615 PF01171 PP-loop family APS46_RS08620 PF00271 Helicase conserved C-terminal domain APS46_RS08620 PF03880 DbpA RNA binding domain APS46_RS08620 PF00270 DEAD/DEAH box helicase APS46_RS08625 PF01544 CorA-like Mg2+ transporter protein APS46_RS08630 PF00672 HAMP domain APS46_RS08630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS46_RS08630 PF02203 Tar ligand binding domain homologue APS46_RS08635 PF01713 Smr domain APS46_RS08640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APS46_RS08640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APS46_RS08645 PF00027 Cyclic nucleotide-binding domain APS46_RS08645 PF13545 Crp-like helix-turn-helix domain APS46_RS08650 PF00582 Universal stress protein family APS46_RS08655 PF10749 Protein of unknown function (DUF2534) APS46_RS08660 PF00924 Mechanosensitive ion channel APS46_RS08680 PF08534 Redoxin APS46_RS08700 PF12833 Helix-turn-helix domain APS46_RS08700 PF06445 GyrI-like small molecule binding domain APS46_RS08715 PF00440 Bacterial regulatory proteins, tetR family APS46_RS08725 PF00248 Aldo/keto reductase family APS46_RS08730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS08730 PF03466 LysR substrate binding domain APS46_RS08740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS46_RS08745 PF00246 Zinc carboxypeptidase APS46_RS08750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS46_RS08750 PF13378 Enolase C-terminal domain-like APS46_RS08755 PF08534 Redoxin APS46_RS08760 PF00158 Sigma-54 interaction domain APS46_RS08760 PF18024 Helix-turn-helix domain APS46_RS08765 PF05128 Domain of unknown function (DUF697) APS46_RS08770 PF04317 YcjX-like family, DUF463 APS46_RS08775 PF00581 Rhodanese-like domain APS46_RS08780 PF09584 Phage shock protein PspD (Phageshock_PspD) APS46_RS08785 PF04024 PspC domain APS46_RS08790 PF06667 Phage shock protein B APS46_RS08795 PF04012 PspA/IM30 family APS46_RS08800 PF00158 Sigma-54 interaction domain APS46_RS08800 PF02954 Bacterial regulatory protein, Fis family APS46_RS08805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS46_RS08810 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS08815 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS08815 PF12911 N-terminal TM domain of oligopeptide transport permease C APS46_RS08820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS46_RS08820 PF00005 ABC transporter APS46_RS08825 PF00005 ABC transporter APS46_RS08860 PF00773 RNB domain APS46_RS08860 PF17876 Cold shock domain APS46_RS08860 PF08206 Ribonuclease B OB domain APS46_RS08860 PF00575 S1 RNA binding domain APS46_RS08865 PF00990 Diguanylate cyclase, GGDEF domain APS46_RS08865 PF00563 EAL domain APS46_RS08865 PF13426 PAS domain APS46_RS08875 PF00455 DeoR C terminal sensor domain APS46_RS08875 PF08220 DeoR-like helix-turn-helix domain APS46_RS08880 PF05433 Glycine zipper 2TM domain APS46_RS08885 PF01253 Translation initiation factor SUI1 APS46_RS08890 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APS46_RS08895 PF18073 Rubredoxin metal binding domain APS46_RS08900 PF06305 Lipopolysaccharide assembly protein A domain APS46_RS08905 PF01569 PAP2 superfamily APS46_RS08910 PF00925 GTP cyclohydrolase II APS46_RS08915 PF00330 Aconitase family (aconitate hydratase) APS46_RS08915 PF00694 Aconitase C-terminal domain APS46_RS08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS08925 PF03466 LysR substrate binding domain APS46_RS08930 PF01751 Toprim domain APS46_RS08930 PF01131 DNA topoisomerase APS46_RS08930 PF08272 Topoisomerase I zinc-ribbon-like APS46_RS08930 PF01396 Topoisomerase DNA binding C4 zinc finger APS46_RS08935 PF10692 Protein of unknown function (DUF2498) APS46_RS08940 PF01343 Peptidase family S49 APS46_RS08940 PF08496 Peptidase family S49 N-terminal APS46_RS08945 PF00106 short chain dehydrogenase APS46_RS08950 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP APS46_RS08955 PF00849 RNA pseudouridylate synthase APS46_RS08955 PF01479 S4 domain APS46_RS08960 PF01300 Telomere recombination APS46_RS08965 PF02811 PHP domain APS46_RS08970 PF04715 Anthranilate synthase component I, N terminal region APS46_RS08970 PF00425 chorismate binding enzyme APS46_RS08975 PF00591 Glycosyl transferase family, a/b domain APS46_RS08975 PF02885 Glycosyl transferase family, helical bundle domain APS46_RS08975 PF00117 Glutamine amidotransferase class-I APS46_RS08980 PF00218 Indole-3-glycerol phosphate synthase APS46_RS08980 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase APS46_RS08985 PF00291 Pyridoxal-phosphate dependent enzyme APS46_RS08990 PF00290 Tryptophan synthase alpha chain APS46_RS08995 PF10685 Stress-induced bacterial acidophilic repeat motif APS46_RS09000 PF05974 Domain of unknown function (DUF892) APS46_RS09005 PF05974 Domain of unknown function (DUF892) APS46_RS09010 PF05067 Manganese containing catalase APS46_RS09015 PF03922 OmpW family APS46_RS09020 PF03692 Putative zinc- or iron-chelating domain APS46_RS09030 PF04279 Intracellular septation protein A APS46_RS09035 PF03061 Thioesterase superfamily APS46_RS09040 PF03544 Gram-negative bacterial TonB protein C-terminal APS46_RS09045 PF03795 YCII-related domain APS46_RS09050 PF13396 Phospholipase_D-nuclease N-terminal APS46_RS09050 PF13091 PLD-like domain APS46_RS09055 PF04269 Protein of unknown function, DUF440 APS46_RS09060 PF00027 Cyclic nucleotide-binding domain APS46_RS09060 PF00520 Ion transport protein APS46_RS09065 PF00005 ABC transporter APS46_RS09065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS46_RS09070 PF00005 ABC transporter APS46_RS09070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS46_RS09075 PF12911 N-terminal TM domain of oligopeptide transport permease C APS46_RS09075 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS09080 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS09085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS46_RS09090 PF01914 MarC family integral membrane protein APS46_RS09095 PF00171 Aldehyde dehydrogenase family APS46_RS09095 PF00465 Iron-containing alcohol dehydrogenase APS46_RS09100 PF00265 Thymidine kinase APS46_RS09105 PF00816 H-NS histone family APS46_RS09110 PF00483 Nucleotidyl transferase APS46_RS09115 PF00072 Response regulator receiver domain APS46_RS09120 PF01734 Patatin-like phospholipase APS46_RS09125 PF02810 SEC-C motif APS46_RS09130 PF00551 Formyl transferase APS46_RS09130 PF01842 ACT domain APS46_RS09175 PF02665 Nitrate reductase gamma subunit APS46_RS09180 PF02613 Nitrate reductase delta subunit APS46_RS09185 PF13247 4Fe-4S dicluster domain APS46_RS09185 PF14711 Respiratory nitrate reductase beta C-terminal APS46_RS09190 PF01568 Molydopterin dinucleotide binding domain APS46_RS09190 PF14710 Respiratory nitrate reductase alpha N-terminal APS46_RS09190 PF00384 Molybdopterin oxidoreductase APS46_RS09195 PF07690 Major Facilitator Superfamily APS46_RS09200 PF00672 HAMP domain APS46_RS09200 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term APS46_RS09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS09200 PF07730 Histidine kinase APS46_RS09205 PF00072 Response regulator receiver domain APS46_RS09205 PF00196 Bacterial regulatory proteins, luxR family APS46_RS09210 PF11924 Inverse autotransporter, beta-domain APS46_RS09215 PF02635 DsrE/DsrF-like family APS46_RS09220 PF06150 ChaB APS46_RS09225 PF01699 Sodium/calcium exchanger protein APS46_RS09230 PF00793 DAHP synthetase I family APS46_RS09235 PF13369 Transglutaminase-like superfamily APS46_RS09240 PF04247 Invasion gene expression up-regulator, SirB APS46_RS09245 PF17827 PrmC N-terminal domain APS46_RS09245 PF13847 Methyltransferase domain APS46_RS09250 PF00472 RF-1 domain APS46_RS09250 PF03462 PCRF domain APS46_RS09255 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain APS46_RS09255 PF01488 Shikimate / quinate 5-dehydrogenase APS46_RS09255 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain APS46_RS09260 PF03550 Outer membrane lipoprotein LolB APS46_RS09265 PF08544 GHMP kinases C terminal APS46_RS09265 PF00288 GHMP kinases N terminal domain APS46_RS09270 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APS46_RS09270 PF14572 Phosphoribosyl synthetase-associated domain APS46_RS09275 PF01740 STAS domain APS46_RS09275 PF00916 Sulfate permease family APS46_RS09280 PF10762 Protein of unknown function (DUF2583) APS46_RS09285 PF01195 Peptidyl-tRNA hydrolase APS46_RS09290 PF01926 50S ribosome-binding GTPase APS46_RS09290 PF06071 Protein of unknown function (DUF933) APS46_RS09300 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal APS46_RS09300 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APS46_RS09305 PF00374 Nickel-dependent hydrogenase APS46_RS09310 PF01292 Prokaryotic cytochrome b561 APS46_RS09315 PF01750 Hydrogenase maturation protease APS46_RS09320 PF07449 Hydrogenase-1 expression protein HyaE APS46_RS09325 PF04809 HupH hydrogenase expression protein, C-terminal conserved region APS46_RS09330 PF01654 Cytochrome bd terminal oxidase subunit I APS46_RS09335 PF02322 Cytochrome bd terminal oxidase subunit II APS46_RS09340 PF08173 Membrane bound YbgT-like protein APS46_RS09345 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain APS46_RS09345 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APS46_RS09350 PF01204 Trehalase APS46_RS09355 PF04226 Transglycosylase associated protein APS46_RS09360 PF07317 Flagellar regulator YcgR APS46_RS09360 PF07238 PilZ domain APS46_RS09365 PF01464 Transglycosylase SLT domain APS46_RS09370 PF17676 LD-carboxypeptidase C-terminal domain APS46_RS09370 PF02016 LD-carboxypeptidase N-terminal domain APS46_RS09375 PF02080 TrkA-C domain APS46_RS09375 PF03471 Transporter associated domain APS46_RS09375 PF00999 Sodium/hydrogen exchanger family APS46_RS09380 PF00842 Alanine racemase, C-terminal domain APS46_RS09380 PF01168 Alanine racemase, N-terminal domain APS46_RS09385 PF01266 FAD dependent oxidoreductase APS46_RS09390 PF04293 SpoVR like protein APS46_RS09395 PF00392 Bacterial regulatory proteins, gntR family APS46_RS09395 PF07840 FadR C-terminal domain APS46_RS09400 PF06450 Bacterial Na+/H+ antiporter B (NhaB) APS46_RS09405 PF02600 Disulfide bond formation protein DsbB APS46_RS09415 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system APS46_RS09425 PF03692 Putative zinc- or iron-chelating domain APS46_RS09430 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS46_RS09435 PF05166 YcgL domain APS46_RS09440 PF03775 Septum formation inhibitor MinC, C-terminal domain APS46_RS09440 PF05209 Septum formation inhibitor MinC, N-terminal domain APS46_RS09445 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APS46_RS09450 PF03776 Septum formation topological specificity factor MinE APS46_RS09455 PF00570 HRDC domain APS46_RS09455 PF01612 3'-5' exonuclease APS46_RS09460 PF00501 AMP-binding enzyme APS46_RS09460 PF13193 AMP-binding enzyme C-terminal domain APS46_RS09465 PF03843 Outer membrane lipoprotein Slp family APS46_RS09470 PF00814 Glycoprotease family APS46_RS09475 PF04851 Type III restriction enzyme, res subunit APS46_RS09475 PF13307 Helicase C-terminal domain APS46_RS09480 PF01042 Endoribonuclease L-PSP APS46_RS09485 PF03701 Uncharacterised protein family (UPF0181) APS46_RS09490 PF04715 Anthranilate synthase component I, N terminal region APS46_RS09490 PF00425 chorismate binding enzyme APS46_RS09495 PF00293 NUDIX domain APS46_RS09500 PF03313 Serine dehydratase alpha chain APS46_RS09500 PF03315 Serine dehydratase beta chain APS46_RS09505 PF00563 EAL domain APS46_RS09505 PF12792 CSS motif domain associated with EAL APS46_RS09510 PF03471 Transporter associated domain APS46_RS09510 PF03741 Integral membrane protein TerC family APS46_RS09520 PF03830 PTS system sorbose subfamily IIB component APS46_RS09520 PF03610 PTS system fructose IIA component APS46_RS09525 PF03609 PTS system sorbose-specific iic component APS46_RS09530 PF03613 PTS system mannose/fructose/sorbose family IID component APS46_RS09535 PF06173 Protein of unknown function (DUF986) APS46_RS09540 PF02659 Putative manganese efflux pump APS46_RS09545 PF13847 Methyltransferase domain APS46_RS09550 PF00905 Penicillin binding protein transpeptidase domain APS46_RS09550 PF03717 Penicillin-binding Protein dimerisation domain APS46_RS09555 PF00313 'Cold-shock' DNA-binding domain APS46_RS09560 PF10736 Protein of unknown function (DUF2627) APS46_RS09565 PF13974 YebO-like protein APS46_RS09570 PF13998 MgrB protein APS46_RS09575 PF13996 YobH-like protein APS46_RS09580 PF01614 Bacterial transcriptional regulator APS46_RS09580 PF09339 IclR helix-turn-helix domain APS46_RS09585 PF07690 Major Facilitator Superfamily APS46_RS09590 PF01435 Peptidase family M48 APS46_RS09595 PF17804 Tail specific protease N-terminal domain APS46_RS09595 PF11818 C-terminal domain of tail specific protease (DUF3340) APS46_RS09595 PF03572 Peptidase family S41 APS46_RS09595 PF00595 PDZ domain APS46_RS09600 PF04352 ProQ/FINO family APS46_RS09600 PF17516 ProQ C-terminal domain APS46_RS09605 PF13185 GAF domain APS46_RS09610 PF04403 Paraquat-inducible protein A APS46_RS09615 PF02470 MlaD protein APS46_RS09620 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF APS46_RS09620 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF APS46_RS09620 PF01189 16S rRNA methyltransferase RsmB/F APS46_RS09625 PF07351 Protein of unknown function (DUF1480) APS46_RS09630 PF07358 Protein of unknown function (DUF1482) APS46_RS09635 PF00149 Calcineurin-like phosphoesterase APS46_RS09645 PF05364 Salmonella type III secretion SopE effector N-terminus APS46_RS09645 PF07487 SopE GEF domain APS46_RS09650 PF07166 Protein of unknown function (DUF1398) APS46_RS09660 PF00583 Acetyltransferase (GNAT) family APS46_RS09685 PF00892 EamA-like transporter family APS46_RS09725 PF10721 Protein of unknown function (DUF2514) APS46_RS09735 PF06630 Enterobacterial exodeoxyribonuclease VIII APS46_RS09735 PF12684 PDDEXK-like domain of unknown function (DUF3799) APS46_RS09750 PF10709 Protein of unknown function (DUF2511) APS46_RS09755 PF05425 Copper resistance protein D APS46_RS09760 PF04234 CopC domain APS46_RS09765 PF06440 DNA polymerase III, theta subunit APS46_RS09770 PF00795 Carbon-nitrogen hydrolase APS46_RS09775 PF00929 Exonuclease APS46_RS09780 PF00326 Prolyl oligopeptidase family APS46_RS09780 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain APS46_RS09785 PF04391 Protein of unknown function (DUF533) APS46_RS09790 PF13995 YebF-like protein APS46_RS09795 PF07130 YebG protein APS46_RS09800 PF02222 ATP-grasp domain APS46_RS09805 PF01081 KDPG and KHG aldolase APS46_RS09810 PF00920 Dehydratase family APS46_RS09815 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain APS46_RS09815 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain APS46_RS09820 PF01380 SIS domain APS46_RS09820 PF01418 Helix-turn-helix domain, rpiR family APS46_RS09825 PF02887 Pyruvate kinase, alpha/beta domain APS46_RS09825 PF00224 Pyruvate kinase, barrel domain APS46_RS09830 PF03279 Bacterial lipid A biosynthesis acyltransferase APS46_RS09835 PF01476 LysM domain APS46_RS09835 PF08525 Opacity-associated protein A N-terminal motif APS46_RS09835 PF01551 Peptidase family M23 APS46_RS09840 PF01297 Zinc-uptake complex component A periplasmic APS46_RS09845 PF00005 ABC transporter APS46_RS09850 PF00950 ABC 3 transport family APS46_RS09855 PF17864 RuvB AAA lid domain APS46_RS09855 PF05491 RuvB C-terminal winged helix domain APS46_RS09855 PF05496 Holliday junction DNA helicase RuvB P-loop domain APS46_RS09860 PF01330 RuvA N terminal domain APS46_RS09860 PF07499 RuvA, C-terminal domain APS46_RS09870 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family APS46_RS09875 PF02075 Crossover junction endodeoxyribonuclease RuvC APS46_RS09880 PF01709 Transcriptional regulator APS46_RS09885 PF00293 NUDIX domain APS46_RS09890 PF02938 GAD domain APS46_RS09890 PF00152 tRNA synthetases class II (D, K and N) APS46_RS09890 PF01336 OB-fold nucleic acid binding domain APS46_RS09895 PF00857 Isochorismatase family APS46_RS09900 PF01904 Protein of unknown function DUF72 APS46_RS09905 PF01124 MAPEG family APS46_RS09910 PF13649 Methyltransferase domain APS46_RS09915 PF08003 Protein of unknown function (DUF1698) APS46_RS09920 PF03932 CutC family APS46_RS09925 PF06185 YecM protein APS46_RS09930 PF00750 tRNA synthetases class I (R) APS46_RS09930 PF05746 DALR anticodon binding domain APS46_RS09930 PF03485 Arginyl tRNA synthetase N terminal domain APS46_RS09935 PF00905 Penicillin binding protein transpeptidase domain APS46_RS09935 PF03717 Penicillin-binding Protein dimerisation domain APS46_RS09940 PF07470 Glycosyl Hydrolase Family 88 APS46_RS09945 PF06366 Flagellar protein FlhE APS46_RS09950 PF00771 FHIPEP family APS46_RS09955 PF01312 FlhB HrpN YscU SpaS Family APS46_RS09960 PF04344 Chemotaxis phosphatase, CheZ APS46_RS09965 PF00072 Response regulator receiver domain APS46_RS09970 PF01339 CheB methylesterase APS46_RS09970 PF00072 Response regulator receiver domain APS46_RS09975 PF01739 CheR methyltransferase, SAM binding domain APS46_RS09975 PF03705 CheR methyltransferase, all-alpha domain APS46_RS09980 PF00672 HAMP domain APS46_RS09980 PF02203 Tar ligand binding domain homologue APS46_RS09980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS46_RS09985 PF01584 CheW-like domain APS46_RS09990 PF02895 Signal transducing histidine kinase, homodimeric domain APS46_RS09990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS09990 PF09078 CheY binding APS46_RS09990 PF01584 CheW-like domain APS46_RS09990 PF01627 Hpt domain APS46_RS09995 PF00691 OmpA family APS46_RS09995 PF13677 Membrane MotB of proton-channel complex MotA/MotB APS46_RS10000 PF01618 MotA/TolQ/ExbB proton channel family APS46_RS10005 PF05280 Flagellar transcriptional activator (FlhC) APS46_RS10010 PF05247 Flagellar transcriptional activator (FlhD) APS46_RS10020 PF00582 Universal stress protein family APS46_RS10025 PF00982 Glycosyltransferase family 20 APS46_RS10030 PF02358 Trehalose-phosphatase APS46_RS10040 PF00210 Ferritin-like domain APS46_RS10050 PF13992 YecR-like lipoprotein APS46_RS10055 PF00210 Ferritin-like domain APS46_RS10060 PF10678 Protein of unknown function (DUF2492) APS46_RS10065 PF03222 Tryptophan/tyrosine permease family APS46_RS10070 PF03695 Uncharacterised protein family (UPF0149) APS46_RS10070 PF02810 SEC-C motif APS46_RS10105 PF01066 CDP-alcohol phosphatidyltransferase APS46_RS10110 PF08459 UvrC Helix-hairpin-helix N-terminal APS46_RS10110 PF02151 UvrB/uvrC motif APS46_RS10110 PF01541 GIY-YIG catalytic domain APS46_RS10115 PF00072 Response regulator receiver domain APS46_RS10115 PF00196 Bacterial regulatory proteins, luxR family APS46_RS10125 PF10769 Protein of unknown function (DUF2594) APS46_RS10130 PF00196 Bacterial regulatory proteins, luxR family APS46_RS10130 PF03472 Autoinducer binding domain APS46_RS10135 PF00005 ABC transporter APS46_RS10140 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS10145 PF00291 Pyridoxal-phosphate dependent enzyme APS46_RS10150 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS46_RS10155 PF02899 Phage integrase, N-terminal SAM-like domain APS46_RS10160 PF04539 Sigma-70 region 3 APS46_RS10160 PF04545 Sigma-70, region 4 APS46_RS10160 PF04542 Sigma-70 region 2 APS46_RS10170 PF08884 Flagellin D3 domain APS46_RS10170 PF00669 Bacterial flagellin N-terminal helical region APS46_RS10170 PF00700 Bacterial flagellin C-terminal helical region APS46_RS10175 PF02465 Flagellar hook-associated protein 2 N-terminus APS46_RS10175 PF07195 Flagellar hook-associated protein 2 C-terminus APS46_RS10175 PF07196 Flagellin hook IN motif APS46_RS10180 PF02561 Flagellar protein FliS APS46_RS10185 PF05400 Flagellar protein FliT APS46_RS10190 PF02806 Alpha amylase, C-terminal all-beta domain APS46_RS10190 PF00128 Alpha amylase, catalytic domain APS46_RS10195 PF13987 YedD-like protein APS46_RS10200 PF04143 Sulphur transport APS46_RS10205 PF01206 Sulfurtransferase TusA APS46_RS10215 PF02049 Flagellar hook-basal body complex protein FliE APS46_RS10220 PF01514 Secretory protein of YscJ/FliF family APS46_RS10220 PF08345 Flagellar M-ring protein C-terminal APS46_RS10225 PF14841 FliG middle domain APS46_RS10225 PF14842 FliG N-terminal domain APS46_RS10225 PF01706 FliG C-terminal domain APS46_RS10230 PF02108 Flagellar assembly protein FliH APS46_RS10235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS46_RS10235 PF18269 T3SS EscN ATPase C-terminal domain APS46_RS10240 PF02050 Flagellar FliJ protein APS46_RS10245 PF02120 Flagellar hook-length control protein FliK APS46_RS10250 PF03748 Flagellar basal body-associated protein FliL APS46_RS10255 PF02154 Flagellar motor switch protein FliM APS46_RS10255 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APS46_RS10260 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APS46_RS10260 PF16973 Flagellar motor switch protein FliN N-terminal APS46_RS10265 PF04347 Flagellar biosynthesis protein, FliO APS46_RS10270 PF00813 FliP family APS46_RS10275 PF01313 Bacterial export proteins, family 3 APS46_RS10280 PF01311 Bacterial export proteins, family 1 APS46_RS10285 PF00196 Bacterial regulatory proteins, luxR family APS46_RS10290 PF10781 Dextransucrase DSRB APS46_RS10295 PF10733 Protein of unknown function (DUF2525) APS46_RS10305 PF00990 Diguanylate cyclase, GGDEF domain APS46_RS10305 PF17151 Periplasmic sensor domain APS46_RS10310 PF09926 Uncharacterized small protein (DUF2158) APS46_RS10315 PF05661 Protein of unknown function (DUF808) APS46_RS10320 PF00892 EamA-like transporter family APS46_RS10325 PF03852 DNA mismatch endonuclease Vsr APS46_RS10330 PF00145 C-5 cytosine-specific DNA methylase APS46_RS10330 PF18284 DNA methylase N-terminal domain APS46_RS10335 PF01966 HD domain APS46_RS10345 PF00267 Gram-negative porin APS46_RS10350 PF00313 'Cold-shock' DNA-binding domain APS46_RS10355 PF13438 Domain of unknown function (DUF4113) APS46_RS10355 PF11799 impB/mucB/samB family C-terminal domain APS46_RS10355 PF00817 impB/mucB/samB family APS46_RS10360 PF00717 Peptidase S24-like APS46_RS10375 PF06167 Glucose-regulated metallo-peptidase M90 APS46_RS10385 PF13356 Arm DNA-binding domain APS46_RS10385 PF00589 Phage integrase family APS46_RS10425 PF01048 Phosphorylase superfamily APS46_RS10425 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus APS46_RS10455 PF01554 MatE APS46_RS10470 PF17969 L,D-transpeptidase C-terminal domain APS46_RS10470 PF03734 L,D-transpeptidase catalytic domain APS46_RS10475 PF02277 Phosphoribosyltransferase APS46_RS10480 PF02654 Cobalamin-5-phosphate synthase APS46_RS10485 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase APS46_RS10490 PF07685 CobB/CobQ-like glutamine amidotransferase domain APS46_RS10495 PF00005 ABC transporter APS46_RS10500 PF02361 Cobalt transport protein APS46_RS10505 PF02553 Cobalt transport protein component CbiN APS46_RS10510 PF01891 Cobalt uptake substrate-specific transmembrane region APS46_RS10515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS46_RS10520 PF06180 Cobalt chelatase (CbiK) APS46_RS10525 PF02571 Precorrin-6x reductase CbiJ/CobK APS46_RS10530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS46_RS10535 PF11760 Cobalamin synthesis G N-terminal APS46_RS10535 PF11761 Cobalamin biosynthesis central region APS46_RS10535 PF01890 Cobalamin synthesis G C-terminus APS46_RS10540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS46_RS10545 PF05175 Methyltransferase small domain APS46_RS10550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS46_RS10555 PF01888 CbiD APS46_RS10560 PF02570 Precorrin-8X methylmutase APS46_RS10565 PF03186 CobD/Cbib protein APS46_RS10570 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APS46_RS10570 PF07685 CobB/CobQ-like glutamine amidotransferase domain APS46_RS10575 PF12833 Helix-turn-helix domain APS46_RS10575 PF10114 Sensory domain found in PocR APS46_RS10580 PF00230 Major intrinsic protein APS46_RS10585 PF00936 BMC domain APS46_RS10590 PF00936 BMC domain APS46_RS10595 PF02286 Dehydratase large subunit APS46_RS10600 PF02288 Dehydratase medium subunit APS46_RS10605 PF02287 Dehydratase small subunit APS46_RS10610 PF18427 DD-reactivating factor swiveling domain APS46_RS10610 PF08841 Diol dehydratase reactivase ATPase-like domain APS46_RS10620 PF00936 BMC domain APS46_RS10625 PF00936 BMC domain APS46_RS10630 PF06130 Phosphate propanoyltransferase APS46_RS10640 PF03319 Ethanolamine utilisation protein EutN/carboxysome APS46_RS10645 PF01923 Cobalamin adenosyltransferase APS46_RS10650 PF00171 Aldehyde dehydrogenase family APS46_RS10655 PF00465 Iron-containing alcohol dehydrogenase APS46_RS10655 PF00171 Aldehyde dehydrogenase family APS46_RS10660 PF10531 SLBB domain APS46_RS10660 PF13375 RnfC Barrel sandwich hybrid domain APS46_RS10660 PF13237 4Fe-4S dicluster domain APS46_RS10660 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APS46_RS10670 PF00936 BMC domain APS46_RS10675 PF10662 Ethanolamine utilisation - propanediol utilisation APS46_RS10680 PF00871 Acetokinase family APS46_RS10685 PF00288 GHMP kinases N terminal domain APS46_RS10690 PF04363 Protein of unknown function (DUF496) APS46_RS10695 PF04632 Fusaric acid resistance protein family APS46_RS10700 PF06445 GyrI-like small molecule binding domain APS46_RS10705 PF00768 D-alanyl-D-alanine carboxypeptidase APS46_RS10705 PF07943 Penicillin-binding protein 5, C-terminal domain APS46_RS10710 PF01292 Prokaryotic cytochrome b561 APS46_RS10715 PF12800 4Fe-4S binding domain APS46_RS10715 PF13247 4Fe-4S dicluster domain APS46_RS10725 PF13981 SopA-like central domain APS46_RS10725 PF13979 SopA-like catalytic domain APS46_RS10730 PF08411 Exonuclease C-terminal APS46_RS10730 PF00929 Exonuclease APS46_RS10735 PF13520 Amino acid permease APS46_RS10740 PF03466 LysR substrate binding domain APS46_RS10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS10745 PF01370 NAD dependent epimerase/dehydratase family APS46_RS10750 PF01634 ATP phosphoribosyltransferase APS46_RS10750 PF08029 HisG, C-terminal domain APS46_RS10755 PF00815 Histidinol dehydrogenase APS46_RS10760 PF00155 Aminotransferase class I and II APS46_RS10765 PF00475 Imidazoleglycerol-phosphate dehydratase APS46_RS10770 PF00117 Glutamine amidotransferase class-I APS46_RS10775 PF00977 Histidine biosynthesis protein APS46_RS10780 PF00977 Histidine biosynthesis protein APS46_RS10785 PF01502 Phosphoribosyl-AMP cyclohydrolase APS46_RS10785 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase APS46_RS10790 PF02706 Chain length determinant protein APS46_RS10795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APS46_RS10795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APS46_RS10800 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APS46_RS10800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS46_RS10805 PF02397 Bacterial sugar transferase APS46_RS10810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS46_RS10810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS46_RS10810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS46_RS10810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS46_RS10815 PF01050 Mannose-6-phosphate isomerase APS46_RS10815 PF00483 Nucleotidyl transferase APS46_RS10820 PF00535 Glycosyl transferase family 2 APS46_RS10825 PF00534 Glycosyl transferases group 1 APS46_RS10825 PF13439 Glycosyltransferase Family 4 APS46_RS10830 PF00535 Glycosyl transferase family 2 APS46_RS10840 PF01370 NAD dependent epimerase/dehydratase family APS46_RS10845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APS46_RS10850 PF16363 GDP-mannose 4,6 dehydratase APS46_RS10855 PF00483 Nucleotidyl transferase APS46_RS10860 PF00175 Oxidoreductase NAD-binding domain APS46_RS10860 PF00111 2Fe-2S iron-sulfur cluster binding domain APS46_RS10860 PF00970 Oxidoreductase FAD-binding domain APS46_RS10865 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase APS46_RS10870 PF00483 Nucleotidyl transferase APS46_RS10875 PF04321 RmlD substrate binding domain APS46_RS10880 PF16363 GDP-mannose 4,6 dehydratase APS46_RS10885 PF00483 Nucleotidyl transferase APS46_RS10895 PF00534 Glycosyl transferases group 1 APS46_RS10895 PF13439 Glycosyltransferase Family 4 APS46_RS10900 PF04230 Polysaccharide pyruvyl transferase APS46_RS10910 PF02397 Bacterial sugar transferase APS46_RS10915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS46_RS10915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS46_RS10915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS46_RS10915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS46_RS10920 PF00483 Nucleotidyl transferase APS46_RS10920 PF01050 Mannose-6-phosphate isomerase APS46_RS10925 PF00534 Glycosyl transferases group 1 APS46_RS10925 PF13579 Glycosyl transferase 4-like domain APS46_RS10930 PF00293 NUDIX domain APS46_RS10935 PF01370 NAD dependent epimerase/dehydratase family APS46_RS10940 PF16363 GDP-mannose 4,6 dehydratase APS46_RS10945 PF00132 Bacterial transferase hexapeptide (six repeats) APS46_RS10950 PF00535 Glycosyl transferase family 2 APS46_RS10960 PF13439 Glycosyltransferase Family 4 APS46_RS10960 PF00534 Glycosyl transferases group 1 APS46_RS10965 PF00132 Bacterial transferase hexapeptide (six repeats) APS46_RS10970 PF00535 Glycosyl transferase family 2 APS46_RS10975 PF02706 Chain length determinant protein APS46_RS10975 PF13807 G-rich domain on putative tyrosine kinase APS46_RS10975 PF13614 AAA domain APS46_RS10980 PF01451 Low molecular weight phosphotyrosine protein phosphatase APS46_RS10985 PF10531 SLBB domain APS46_RS10985 PF18412 Outer-membrane lipoprotein Wza C-terminal domain APS46_RS10985 PF02563 Polysaccharide biosynthesis/export protein APS46_RS10990 PF03471 Transporter associated domain APS46_RS10990 PF03741 Integral membrane protein TerC family APS46_RS10990 PF00571 CBS domain APS46_RS10995 PF05170 AsmA family APS46_RS11000 PF00692 dUTPase APS46_RS11005 PF00485 Phosphoribulokinase / Uridine kinase family APS46_RS11010 PF05231 MASE1 APS46_RS11010 PF00990 Diguanylate cyclase, GGDEF domain APS46_RS11010 PF00563 EAL domain APS46_RS11010 PF13426 PAS domain APS46_RS11010 PF08448 PAS fold APS46_RS11010 PF08447 PAS fold APS46_RS11015 PF06029 AlkA N-terminal domain APS46_RS11015 PF00730 HhH-GPD superfamily base excision DNA repair protein APS46_RS11020 PF00012 Hsp70 protein APS46_RS11025 PF13533 Biotin-lipoyl like APS46_RS11030 PF00873 AcrB/AcrD/AcrF family APS46_RS11035 PF00873 AcrB/AcrD/AcrF family APS46_RS11040 PF07690 Major Facilitator Superfamily APS46_RS11045 PF00672 HAMP domain APS46_RS11045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS11045 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS11050 PF00486 Transcriptional regulatory protein, C terminal APS46_RS11050 PF00072 Response regulator receiver domain APS46_RS11070 PF01136 Peptidase family U32 APS46_RS11070 PF16325 Peptidase family U32 C-terminal domain APS46_RS11080 PF05932 Tir chaperone protein (CesT) family APS46_RS11095 PF00781 Diacylglycerol kinase catalytic domain APS46_RS11100 PF01791 DeoC/LacD family aldolase APS46_RS11105 PF03825 Nucleoside H+ symporter APS46_RS11110 PF03747 ADP-ribosylglycohydrolase APS46_RS11115 PF00294 pfkB family carbohydrate kinase APS46_RS11120 PF07702 UTRA domain APS46_RS11120 PF00392 Bacterial regulatory proteins, gntR family APS46_RS11125 PF08543 Phosphomethylpyrimidine kinase APS46_RS11130 PF02110 Hydroxyethylthiazole kinase family APS46_RS11135 PF11776 Nickel/cobalt transporter regulator APS46_RS11140 PF00419 Fimbrial protein APS46_RS11145 PF00577 Outer membrane usher protein APS46_RS11145 PF13954 PapC N-terminal domain APS46_RS11145 PF13953 PapC C-terminal domain APS46_RS11150 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS11150 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS11165 PF10609 NUBPL iron-transfer P-loop NTPase APS46_RS11175 PF06998 Protein of unknown function (DUF1307) APS46_RS11185 PF07308 Protein of unknown function (DUF1456) APS46_RS11190 PF04397 LytTr DNA-binding domain APS46_RS11190 PF00072 Response regulator receiver domain APS46_RS11195 PF07694 5TMR of 5TMR-LYT APS46_RS11195 PF06580 Histidine kinase APS46_RS11200 PF13411 MerR HTH family regulatory protein APS46_RS11210 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS11215 PF00005 ABC transporter APS46_RS11220 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS11225 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APS46_RS11230 PF01915 Glycosyl hydrolase family 3 C-terminal domain APS46_RS11230 PF00933 Glycosyl hydrolase family 3 N terminal domain APS46_RS11230 PF14310 Fibronectin type III-like domain APS46_RS11235 PF09330 D-lactate dehydrogenase, membrane binding APS46_RS11235 PF01565 FAD binding domain APS46_RS11240 PF00768 D-alanyl-D-alanine carboxypeptidase APS46_RS11245 PF04893 Yip1 domain APS46_RS11250 PF09335 SNARE associated Golgi protein APS46_RS11260 PF02321 Outer membrane efflux protein APS46_RS11265 PF01207 Dihydrouridine synthase (Dus) APS46_RS11270 PF01494 FAD binding domain APS46_RS11275 PF14497 Glutathione S-transferase, C-terminal domain APS46_RS11275 PF02798 Glutathione S-transferase, N-terminal domain APS46_RS11280 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS46_RS11285 PF07883 Cupin domain APS46_RS11290 PF07690 Major Facilitator Superfamily APS46_RS11295 PF03466 LysR substrate binding domain APS46_RS11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS11300 PF03788 LrgA family APS46_RS11305 PF04172 LrgB-like family APS46_RS11310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APS46_RS11310 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region APS46_RS11315 PF02698 DUF218 domain APS46_RS11320 PF10808 Protein of unknown function (DUF2542) APS46_RS11325 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS11325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APS46_RS11330 PF01180 Dihydroorotate dehydrogenase APS46_RS11335 PF02653 Branched-chain amino acid transport system / permease component APS46_RS11340 PF00005 ABC transporter APS46_RS11345 PF13407 Periplasmic binding protein domain APS46_RS11350 PF00356 Bacterial regulatory proteins, lacI family APS46_RS11355 PF04235 Protein of unknown function (DUF418) APS46_RS11360 PF01227 GTP cyclohydrolase I APS46_RS11365 PF00756 Putative esterase APS46_RS11375 PF03315 Serine dehydratase beta chain APS46_RS11375 PF03313 Serine dehydratase alpha chain APS46_RS11380 PF18429 Domain of unknown function (DUF5609) APS46_RS11385 PF07690 Major Facilitator Superfamily APS46_RS11390 PF07715 TonB-dependent Receptor Plug Domain APS46_RS11390 PF00593 TonB dependent receptor APS46_RS11395 PF00324 Amino acid permease APS46_RS11400 PF03466 LysR substrate binding domain APS46_RS11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS11405 PF03601 Conserved hypothetical protein 698 APS46_RS11410 PF01261 Xylose isomerase-like TIM barrel APS46_RS11415 PF02378 Phosphotransferase system, EIIC APS46_RS11415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS11420 PF00294 pfkB family carbohydrate kinase APS46_RS11425 PF00381 PTS HPr component phosphorylation site APS46_RS11425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS11430 PF07690 Major Facilitator Superfamily APS46_RS11445 PF03692 Putative zinc- or iron-chelating domain APS46_RS11450 PF08207 Elongation factor P (EF-P) KOW-like domain APS46_RS11450 PF09285 Elongation factor P, C-terminal APS46_RS11450 PF01132 Elongation factor P (EF-P) OB domain APS46_RS11455 PF02492 CobW/HypB/UreG, nucleotide-binding domain APS46_RS11455 PF07683 Cobalamin synthesis protein cobW C-terminal domain APS46_RS11460 PF01569 PAP2 superfamily APS46_RS11465 PF00877 NlpC/P60 family APS46_RS11470 PF12792 CSS motif domain associated with EAL APS46_RS11470 PF00563 EAL domain APS46_RS11475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS46_RS11480 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS11485 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS11485 PF12911 N-terminal TM domain of oligopeptide transport permease C APS46_RS11490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS46_RS11490 PF00005 ABC transporter APS46_RS11495 PF13989 YejG-like protein APS46_RS11505 PF07690 Major Facilitator Superfamily APS46_RS11510 PF01479 S4 domain APS46_RS11510 PF00849 RNA pseudouridylate synthase APS46_RS11515 PF00271 Helicase conserved C-terminal domain APS46_RS11515 PF04851 Type III restriction enzyme, res subunit APS46_RS11520 PF01386 Ribosomal L25p family APS46_RS11530 PF04245 37-kD nucleoid-associated bacterial protein APS46_RS11535 PF07208 Protein of unknown function (DUF1414) APS46_RS11540 PF00884 Sulfatase APS46_RS11540 PF11893 Domain of unknown function (DUF3413) APS46_RS11550 PF00717 Peptidase S24-like APS46_RS11555 PF06183 DinI-like family APS46_RS11565 PF02413 Caudovirales tail fibre assembly protein, lambda gpK APS46_RS11595 PF06530 Phage antitermination protein Q APS46_RS11600 PF06147 Protein of unknown function (DUF968) APS46_RS11610 PF12468 Type III secretion system leucine rich repeat protein APS46_RS11610 PF14496 C-terminal novel E3 ligase, LRR-interacting APS46_RS11620 PF08400 Prophage tail fibre N-terminal APS46_RS11620 PF03335 Phage tail fibre repeat APS46_RS11620 PF07484 Phage Tail Collar Domain APS46_RS11635 PF00196 Bacterial regulatory proteins, luxR family APS46_RS11635 PF00072 Response regulator receiver domain APS46_RS11640 PF03918 Cytochrome C biogenesis protein APS46_RS11645 PF08534 Redoxin APS46_RS11650 PF01578 Cytochrome C assembly protein APS46_RS11650 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal APS46_RS11655 PF03100 CcmE APS46_RS11660 PF04995 Heme exporter protein D (CcmD) APS46_RS11665 PF01578 Cytochrome C assembly protein APS46_RS11670 PF03379 CcmB protein APS46_RS11675 PF00005 ABC transporter APS46_RS11680 PF03264 NapC/NirT cytochrome c family, N-terminal region APS46_RS11685 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) APS46_RS11690 PF12801 4Fe-4S binding domain APS46_RS11690 PF13237 4Fe-4S dicluster domain APS46_RS11695 PF12800 4Fe-4S binding domain APS46_RS11695 PF12838 4Fe-4S dicluster domain APS46_RS11700 PF01568 Molydopterin dinucleotide binding domain APS46_RS11700 PF00384 Molybdopterin oxidoreductase APS46_RS11700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS11705 PF03927 NapD protein APS46_RS11710 PF00037 4Fe-4S binding domain APS46_RS11710 PF13187 4Fe-4S dicluster domain APS46_RS11710 PF12800 4Fe-4S binding domain APS46_RS11715 PF03974 Ecotin APS46_RS11720 PF00005 ABC transporter APS46_RS11725 PF13532 2OG-Fe(II) oxygenase superfamily APS46_RS11730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APS46_RS11730 PF12833 Helix-turn-helix domain APS46_RS11730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APS46_RS11730 PF02805 Metal binding domain of Ada APS46_RS11735 PF02424 ApbE family APS46_RS11740 PF00267 Gram-negative porin APS46_RS11745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS11745 PF01627 Hpt domain APS46_RS11745 PF16359 RcsD-ABL domain APS46_RS11750 PF00072 Response regulator receiver domain APS46_RS11750 PF00196 Bacterial regulatory proteins, luxR family APS46_RS11755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS11755 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS11755 PF09456 RcsC Alpha-Beta-Loop (ABL) APS46_RS11755 PF00072 Response regulator receiver domain APS46_RS11760 PF00521 DNA gyrase/topoisomerase IV, subunit A APS46_RS11760 PF03989 DNA gyrase C-terminal domain, beta-propeller APS46_RS11765 PF13378 Enolase C-terminal domain-like APS46_RS11765 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS46_RS11770 PF07690 Major Facilitator Superfamily APS46_RS11785 PF03477 ATP cone domain APS46_RS11785 PF02867 Ribonucleotide reductase, barrel domain APS46_RS11785 PF00317 Ribonucleotide reductase, all-alpha domain APS46_RS11790 PF00268 Ribonucleotide reductase, small chain APS46_RS11795 PF00111 2Fe-2S iron-sulfur cluster binding domain APS46_RS11800 PF07690 Major Facilitator Superfamily APS46_RS11805 PF03466 LysR substrate binding domain APS46_RS11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS11810 PF03009 Glycerophosphoryl diester phosphodiesterase family APS46_RS11815 PF07690 Major Facilitator Superfamily APS46_RS11820 PF04324 BFD-like [2Fe-2S] binding domain APS46_RS11820 PF01266 FAD dependent oxidoreductase APS46_RS11825 PF00890 FAD binding domain APS46_RS11830 PF02754 Cysteine-rich domain APS46_RS11830 PF13183 4Fe-4S dicluster domain APS46_RS11845 PF03328 HpcH/HpaI aldolase/citrate lyase family APS46_RS11850 PF07690 Major Facilitator Superfamily APS46_RS11855 PF13378 Enolase C-terminal domain-like APS46_RS11855 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS46_RS11860 PF01614 Bacterial transcriptional regulator APS46_RS11860 PF09339 IclR helix-turn-helix domain APS46_RS11865 PF00994 Probable molybdopterin binding domain APS46_RS11870 PF07437 YfaZ precursor APS46_RS11875 PF00293 NUDIX domain APS46_RS11880 PF00300 Histidine phosphatase superfamily (branch 1) APS46_RS11885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APS46_RS11890 PF00535 Glycosyl transferase family 2 APS46_RS11895 PF00551 Formyl transferase APS46_RS11895 PF02911 Formyl transferase, C-terminal domain APS46_RS11895 PF01370 NAD dependent epimerase/dehydratase family APS46_RS11900 PF01522 Polysaccharide deacetylase APS46_RS11905 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase APS46_RS11910 PF00892 EamA-like transporter family APS46_RS11925 PF00501 AMP-binding enzyme APS46_RS11925 PF13193 AMP-binding enzyme C-terminal domain APS46_RS11930 PF13378 Enolase C-terminal domain-like APS46_RS11935 PF00378 Enoyl-CoA hydratase/isomerase APS46_RS11940 PF12697 Alpha/beta hydrolase family APS46_RS11945 PF16582 Middle domain of thiamine pyrophosphate APS46_RS11945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS46_RS11945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS46_RS11950 PF00425 chorismate binding enzyme APS46_RS11955 PF05957 Bacterial protein of unknown function (DUF883) APS46_RS11960 PF13673 Acetyltransferase (GNAT) domain APS46_RS11965 PF12706 Beta-lactamase superfamily domain APS46_RS11970 PF01584 CheW-like domain APS46_RS11970 PF00072 Response regulator receiver domain APS46_RS11975 PF00361 Proton-conducting membrane transporter APS46_RS11980 PF00361 Proton-conducting membrane transporter APS46_RS11985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APS46_RS11985 PF00361 Proton-conducting membrane transporter APS46_RS11990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L APS46_RS11995 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 APS46_RS12000 PF12838 4Fe-4S dicluster domain APS46_RS12005 PF00146 NADH dehydrogenase APS46_RS12010 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APS46_RS12010 PF01568 Molydopterin dinucleotide binding domain APS46_RS12010 PF00384 Molybdopterin oxidoreductase APS46_RS12010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS12015 PF10531 SLBB domain APS46_RS12015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APS46_RS12015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APS46_RS12025 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit APS46_RS12025 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APS46_RS12030 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APS46_RS12035 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 APS46_RS12045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS12045 PF03466 LysR substrate binding domain APS46_RS12050 PF00155 Aminotransferase class I and II APS46_RS12060 PF03600 Citrate transporter APS46_RS12060 PF02080 TrkA-C domain APS46_RS12065 PF13419 Haloacid dehalogenase-like hydrolase APS46_RS12070 PF03887 YfbU domain APS46_RS12075 PF04217 Protein of unknown function, DUF412 APS46_RS12080 PF00871 Acetokinase family APS46_RS12085 PF01515 Phosphate acetyl/butaryl transferase APS46_RS12085 PF07085 DRTGG domain APS46_RS12090 PF03606 C4-dicarboxylate anaerobic carrier APS46_RS12095 PF02780 Transketolase, C-terminal domain APS46_RS12095 PF02779 Transketolase, pyrimidine binding domain APS46_RS12095 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APS46_RS12100 PF00456 Transketolase, thiamine diphosphate binding domain APS46_RS12105 PF03611 PTS system sugar-specific permease component APS46_RS12115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS12125 PF00356 Bacterial regulatory proteins, lacI family APS46_RS12130 PF00293 NUDIX domain APS46_RS12135 PF12850 Calcineurin-like phosphoesterase superfamily domain APS46_RS12140 PF02798 Glutathione S-transferase, N-terminal domain APS46_RS12140 PF14834 Glutathione S-transferase, C-terminal domain APS46_RS12145 PF02798 Glutathione S-transferase, N-terminal domain APS46_RS12145 PF00043 Glutathione S-transferase, C-terminal domain APS46_RS12150 PF01370 NAD dependent epimerase/dehydratase family APS46_RS12150 PF08338 Domain of unknown function (DUF1731) APS46_RS12155 PF00005 ABC transporter APS46_RS12160 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS12165 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS12170 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS46_RS12175 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS46_RS12180 PF02441 Flavoprotein APS46_RS12185 PF00324 Amino acid permease APS46_RS12190 PF01168 Alanine racemase, N-terminal domain APS46_RS12195 PF13520 Amino acid permease APS46_RS12200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APS46_RS12200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APS46_RS12205 PF13426 PAS domain APS46_RS12205 PF00158 Sigma-54 interaction domain APS46_RS12205 PF02954 Bacterial regulatory protein, Fis family APS46_RS12210 PF00156 Phosphoribosyl transferase domain APS46_RS12215 PF02674 Colicin V production protein APS46_RS12220 PF05036 Sporulation related domain APS46_RS12225 PF02875 Mur ligase family, glutamate ligase domain APS46_RS12225 PF08245 Mur ligase middle domain APS46_RS12230 PF17848 Acetyl-coA carboxylase zinc finger domain APS46_RS12230 PF01039 Carboxyl transferase domain APS46_RS12235 PF09335 SNARE associated Golgi protein APS46_RS12240 PF01416 tRNA pseudouridine synthase APS46_RS12245 PF02774 Semialdehyde dehydrogenase, dimerisation domain APS46_RS12245 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS46_RS12250 PF11890 Domain of unknown function (DUF3410) APS46_RS12250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS46_RS12250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS46_RS12260 PF07690 Major Facilitator Superfamily APS46_RS12270 PF13693 Winged helix-turn-helix DNA-binding APS46_RS12285 PF02517 CPBP intramembrane metalloprotease APS46_RS12290 PF02801 Beta-ketoacyl synthase, C-terminal domain APS46_RS12290 PF00109 Beta-ketoacyl synthase, N-terminal domain APS46_RS12295 PF05430 S-adenosyl-L-methionine-dependent methyltransferase APS46_RS12295 PF01266 FAD dependent oxidoreductase APS46_RS12300 PF08891 YfcL protein APS46_RS12305 PF04315 Elongation factor P hydroxylase APS46_RS12310 PF01925 Sulfite exporter TauE/SafE APS46_RS12315 PF03411 Penicillin-insensitive murein endopeptidase APS46_RS12320 PF01264 Chorismate synthase APS46_RS12325 PF05175 Methyltransferase small domain APS46_RS12330 PF01713 Smr domain APS46_RS12335 PF00300 Histidine phosphatase superfamily (branch 1) APS46_RS12340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APS46_RS12340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APS46_RS12340 PF00378 Enoyl-CoA hydratase/isomerase APS46_RS12345 PF02803 Thiolase, C-terminal domain APS46_RS12345 PF00108 Thiolase, N-terminal domain APS46_RS12350 PF04175 Protein of unknown function (DUF406) APS46_RS12355 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) APS46_RS12360 PF04333 MlaA lipoprotein APS46_RS12365 PF01226 Formate/nitrite transporter APS46_RS12375 PF14659 Phage integrase, N-terminal SAM-like domain APS46_RS12375 PF13356 Arm DNA-binding domain APS46_RS12375 PF00589 Phage integrase family APS46_RS12430 PF01278 Omptin family APS46_RS12435 PF00072 Response regulator receiver domain APS46_RS12435 PF14532 Sigma-54 interaction domain APS46_RS12435 PF02954 Bacterial regulatory protein, Fis family APS46_RS12440 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS12440 PF00672 HAMP domain APS46_RS12440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS12455 PF07690 Major Facilitator Superfamily APS46_RS12460 PF10810 Protein of unknown function (DUF2545) APS46_RS12470 PF03279 Bacterial lipid A biosynthesis acyltransferase APS46_RS12475 PF01797 Transposase IS200 like APS46_RS12485 PF00155 Aminotransferase class I and II APS46_RS12490 PF02685 Glucokinase APS46_RS12495 PF00654 Voltage gated chloride channel APS46_RS12500 PF00205 Thiamine pyrophosphate enzyme, central domain APS46_RS12500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS46_RS12500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS46_RS12505 PF00248 Aldo/keto reductase family APS46_RS12510 PF10697 Protein of unknown function (DUF2502) APS46_RS12515 PF01566 Natural resistance-associated macrophage protein APS46_RS12520 PF01773 Na+ dependent nucleoside transporter N-terminus APS46_RS12520 PF07670 Nucleoside recognition APS46_RS12520 PF07662 Na+ dependent nucleoside transporter C-terminus APS46_RS12525 PF05231 MASE1 APS46_RS12525 PF00563 EAL domain APS46_RS12540 PF07037 Putative transcription regulator (DUF1323) APS46_RS12545 PF07037 Putative transcription regulator (DUF1323) APS46_RS12550 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS46_RS12575 PF03466 LysR substrate binding domain APS46_RS12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS12585 PF03825 Nucleoside H+ symporter APS46_RS12590 PF01048 Phosphorylase superfamily APS46_RS12595 PF03502 Nucleoside-specific channel-forming protein, Tsx APS46_RS12600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS12600 PF03466 LysR substrate binding domain APS46_RS12605 PF13593 SBF-like CPA transporter family (DUF4137) APS46_RS12610 PF12843 Putative quorum-sensing-regulated virulence factor APS46_RS12615 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APS46_RS12615 PF12826 Helix-hairpin-helix motif APS46_RS12615 PF03120 NAD-dependent DNA ligase OB-fold domain APS46_RS12615 PF00533 BRCA1 C Terminus (BRCT) domain APS46_RS12615 PF01653 NAD-dependent DNA ligase adenylation domain APS46_RS12620 PF04354 ZipA, C-terminal FtsZ-binding domain APS46_RS12630 PF00291 Pyridoxal-phosphate dependent enzyme APS46_RS12640 PF00381 PTS HPr component phosphorylation site APS46_RS12645 PF05524 PEP-utilising enzyme, N-terminal APS46_RS12645 PF02896 PEP-utilising enzyme, TIM barrel domain APS46_RS12645 PF00391 PEP-utilising enzyme, mobile domain APS46_RS12650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APS46_RS12660 PF08543 Phosphomethylpyrimidine kinase APS46_RS12665 PF00392 Bacterial regulatory proteins, gntR family APS46_RS12665 PF00155 Aminotransferase class I and II APS46_RS12670 PF00117 Glutamine amidotransferase class-I APS46_RS12675 PF17263 Family of unknown function (DUF5329) APS46_RS12685 PF00291 Pyridoxal-phosphate dependent enzyme APS46_RS12690 PF00005 ABC transporter APS46_RS12695 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS12700 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS12715 PF04261 Dyp-type peroxidase family APS46_RS12720 PF06572 Protein of unknown function (DUF1131) APS46_RS12725 PF11143 Protein of unknown function (DUF2919) APS46_RS12730 PF00583 Acetyltransferase (GNAT) family APS46_RS12735 PF01520 N-acetylmuramoyl-L-alanine amidase APS46_RS12740 PF01218 Coproporphyrinogen III oxidase APS46_RS12750 PF12833 Helix-turn-helix domain APS46_RS12755 PF16365 Ethanolamine utilization protein EutK C-terminus APS46_RS12755 PF00936 BMC domain APS46_RS12760 PF00936 BMC domain APS46_RS12765 PF05985 Ethanolamine ammonia-lyase light chain (EutC) APS46_RS12770 PF06751 Ethanolamine ammonia lyase large subunit (EutB) APS46_RS12775 PF06277 Ethanolamine utilisation protein EutA APS46_RS12780 PF04346 Ethanolamine utilisation protein, EutH APS46_RS12785 PF00465 Iron-containing alcohol dehydrogenase APS46_RS12795 PF00171 Aldehyde dehydrogenase family APS46_RS12800 PF03319 Ethanolamine utilisation protein EutN/carboxysome APS46_RS12805 PF00936 BMC domain APS46_RS12810 PF01515 Phosphate acetyl/butaryl transferase APS46_RS12815 PF01923 Cobalamin adenosyltransferase APS46_RS12820 PF06249 Ethanolamine utilisation protein EutQ APS46_RS12825 PF10662 Ethanolamine utilisation - propanediol utilisation APS46_RS12830 PF00936 BMC domain APS46_RS12835 PF03949 Malic enzyme, NAD binding domain APS46_RS12835 PF00390 Malic enzyme, N-terminal domain APS46_RS12835 PF01515 Phosphate acetyl/butaryl transferase APS46_RS12840 PF00923 Transaldolase/Fructose-6-phosphate aldolase APS46_RS12845 PF02779 Transketolase, pyrimidine binding domain APS46_RS12845 PF00456 Transketolase, thiamine diphosphate binding domain APS46_RS12845 PF02780 Transketolase, C-terminal domain APS46_RS12855 PF06674 Protein of unknown function (DUF1176) APS46_RS12860 PF00293 NUDIX domain APS46_RS12865 PF00144 Beta-lactamase APS46_RS12870 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS12870 PF13247 4Fe-4S dicluster domain APS46_RS12870 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APS46_RS12875 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term APS46_RS12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS12875 PF00672 HAMP domain APS46_RS12875 PF07730 Histidine kinase APS46_RS12880 PF00873 AcrB/AcrD/AcrF family APS46_RS12885 PF03960 ArsC family APS46_RS12890 PF01546 Peptidase family M20/M25/M40 APS46_RS12890 PF07687 Peptidase dimerisation domain APS46_RS12895 PF13980 Uncharacterised protein family (UPF0370) APS46_RS12900 PF13718 GNAT acetyltransferase 2 APS46_RS12900 PF08351 Domain of unknown function (DUF1726) APS46_RS12900 PF05127 Helicase APS46_RS12900 PF17176 tRNA-binding domain APS46_RS12905 PF04228 Putative neutral zinc metallopeptidase APS46_RS12910 PF01259 SAICAR synthetase APS46_RS12915 PF06804 NlpB/DapX lipoprotein APS46_RS12920 PF00701 Dihydrodipicolinate synthetase family APS46_RS12925 PF01842 ACT domain APS46_RS12930 PF00578 AhpC/TSA family APS46_RS12935 PF02595 Glycerate kinase family APS46_RS12940 PF01594 AI-2E family transporter APS46_RS12945 PF01435 Peptidase family M48 APS46_RS12950 PF03960 ArsC family APS46_RS12955 PF00308 Bacterial dnaA protein APS46_RS12960 PF00860 Permease family APS46_RS12970 PF00586 AIR synthase related protein, N-terminal domain APS46_RS12970 PF02769 AIR synthase related protein, C-terminal domain APS46_RS12975 PF00551 Formyl transferase APS46_RS12980 PF13089 Polyphosphate kinase N-terminal domain APS46_RS12980 PF02503 Polyphosphate kinase middle domain APS46_RS12980 PF17941 Polyphosphate kinase C-terminal domain 1 APS46_RS12980 PF13090 Polyphosphate kinase C-terminal domain 2 APS46_RS12985 PF02541 Ppx/GppA phosphatase family APS46_RS12990 PF00563 EAL domain APS46_RS12990 PF05231 MASE1 APS46_RS13000 PF11119 Protein of unknown function (DUF2633) APS46_RS13010 PF13333 Integrase core domain APS46_RS13010 PF00665 Integrase core domain APS46_RS13010 PF13276 HTH-like domain APS46_RS13015 PF00117 Glutamine amidotransferase class-I APS46_RS13015 PF00958 GMP synthase C terminal domain APS46_RS13015 PF02540 NAD synthase APS46_RS13020 PF00478 IMP dehydrogenase / GMP reductase domain APS46_RS13020 PF00571 CBS domain APS46_RS13025 PF02601 Exonuclease VII, large subunit APS46_RS13025 PF13742 OB-fold nucleic acid binding domain APS46_RS13030 PF03797 Autotransporter beta-domain APS46_RS13050 PF01476 LysM domain APS46_RS13050 PF07979 Intimin C-type lectin domain APS46_RS13050 PF11924 Inverse autotransporter, beta-domain APS46_RS13050 PF02369 Bacterial Ig-like domain (group 1) APS46_RS13050 PF02368 Bacterial Ig-like domain (group 2) APS46_RS13055 PF07191 zinc-ribbons APS46_RS13060 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APS46_RS13060 PF01926 50S ribosome-binding GTPase APS46_RS13065 PF13360 PQQ-like domain APS46_RS13070 PF09976 Tetratricopeptide repeat-like domain APS46_RS13075 PF13393 Histidyl-tRNA synthetase APS46_RS13075 PF03129 Anticodon binding domain APS46_RS13080 PF04551 GcpE protein APS46_RS13085 PF13464 Domain of unknown function (DUF4115) APS46_RS13090 PF04055 Radical SAM superfamily APS46_RS13095 PF00334 Nucleoside diphosphate kinase APS46_RS13110 PF13247 4Fe-4S dicluster domain APS46_RS13110 PF12800 4Fe-4S binding domain APS46_RS13115 PF01568 Molydopterin dinucleotide binding domain APS46_RS13115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS13115 PF00384 Molybdopterin oxidoreductase APS46_RS13120 PF00905 Penicillin binding protein transpeptidase domain APS46_RS13120 PF06832 Penicillin-Binding Protein C-terminus Family APS46_RS13120 PF00912 Transglycosylase APS46_RS13125 PF17962 Bacterial macroglobulin domain 6 APS46_RS13125 PF07703 Alpha-2-macroglobulin bait region domain APS46_RS13125 PF01835 MG2 domain APS46_RS13125 PF07678 A-macroglobulin TED domain APS46_RS13125 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain APS46_RS13125 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain APS46_RS13125 PF11974 Bacterial alpha-2-macroglobulin MG3 domain APS46_RS13125 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain APS46_RS13125 PF00207 Alpha-2-macroglobulin family APS46_RS13130 PF00581 Rhodanese-like domain APS46_RS13140 PF07179 SseB protein N-terminal domain APS46_RS13140 PF14581 SseB protein C-terminal domain APS46_RS13145 PF00883 Cytosol aminopeptidase family, catalytic domain APS46_RS13145 PF12404 Peptidase APS46_RS13150 PF04384 Iron-sulphur cluster assembly APS46_RS13155 PF00111 2Fe-2S iron-sulfur cluster binding domain APS46_RS13160 PF00012 Hsp70 protein APS46_RS13165 PF07743 HSCB C-terminal oligomerisation domain APS46_RS13170 PF01521 Iron-sulphur cluster biosynthesis APS46_RS13175 PF01592 NifU-like N terminal domain APS46_RS13180 PF00266 Aminotransferase class-V APS46_RS13185 PF02082 Transcriptional regulator APS46_RS13190 PF00588 SpoU rRNA Methylase family APS46_RS13195 PF00459 Inositol monophosphatase family APS46_RS13200 PF12146 Serine aminopeptidase, S33 APS46_RS13205 PF17179 4Fe-4S dicluster domain APS46_RS13210 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B APS46_RS13210 PF00175 Oxidoreductase NAD-binding domain APS46_RS13215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS46_RS13215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APS46_RS13215 PF13187 4Fe-4S dicluster domain APS46_RS13220 PF03824 High-affinity nickel-transport protein APS46_RS13230 PF00874 PRD domain APS46_RS13235 PF12832 MFS_1 like family APS46_RS13240 PF00464 Serine hydroxymethyltransferase APS46_RS13245 PF00970 Oxidoreductase FAD-binding domain APS46_RS13245 PF00175 Oxidoreductase NAD-binding domain APS46_RS13245 PF00042 Globin APS46_RS13250 PF18500 CadC C-terminal domain 1 APS46_RS13250 PF00486 Transcriptional regulatory protein, C terminal APS46_RS13255 PF13520 Amino acid permease APS46_RS13260 PF01276 Orn/Lys/Arg decarboxylase, major domain APS46_RS13260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain APS46_RS13260 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain APS46_RS13265 PF00854 POT family APS46_RS13270 PF00543 Nitrogen regulatory protein P-II APS46_RS13275 PF00158 Sigma-54 interaction domain APS46_RS13275 PF00072 Response regulator receiver domain APS46_RS13280 PF13942 YfhG lipoprotein APS46_RS13285 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS13285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS13290 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal APS46_RS13290 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain APS46_RS13290 PF02769 AIR synthase related protein, C-terminal domain APS46_RS13300 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS46_RS13300 PF01464 Transglycosylase SLT domain APS46_RS13305 PF14437 MafB19-like deaminase APS46_RS13315 PF02378 Phosphotransferase system, EIIC APS46_RS13315 PF00367 phosphotransferase system, EIIB APS46_RS13320 PF01380 SIS domain APS46_RS13325 PF01380 SIS domain APS46_RS13325 PF01418 Helix-turn-helix domain, rpiR family APS46_RS13330 PF08546 Ketopantoate reductase PanE/ApbA C terminal APS46_RS13330 PF02558 Ketopantoate reductase PanE/ApbA APS46_RS13335 PF07690 Major Facilitator Superfamily APS46_RS13340 PF03466 LysR substrate binding domain APS46_RS13340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS13345 PF12838 4Fe-4S dicluster domain APS46_RS13350 PF01648 4'-phosphopantetheinyl transferase superfamily APS46_RS13355 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ APS46_RS13360 PF11967 Recombination protein O N terminal APS46_RS13360 PF02565 Recombination protein O C terminal APS46_RS13365 PF07650 KH domain APS46_RS13365 PF01926 50S ribosome-binding GTPase APS46_RS13370 PF00035 Double-stranded RNA binding motif APS46_RS13370 PF14622 Ribonuclease-III-like APS46_RS13375 PF10502 Signal peptidase, peptidase S26 APS46_RS13380 PF00679 Elongation factor G C-terminus APS46_RS13380 PF00009 Elongation factor Tu GTP binding domain APS46_RS13380 PF03144 Elongation factor Tu domain 2 APS46_RS13380 PF06421 GTP-binding protein LepA C-terminus APS46_RS13390 PF17188 MucB/RseB C-terminal domain APS46_RS13390 PF03888 MucB/RseB N-terminal domain APS46_RS13395 PF03872 Anti sigma-E protein RseA, N-terminal domain APS46_RS13395 PF03873 Anti sigma-E protein RseA, C-terminal domain APS46_RS13400 PF04542 Sigma-70 region 2 APS46_RS13400 PF08281 Sigma-70, region 4 APS46_RS13405 PF02910 Fumarate reductase flavoprotein C-term APS46_RS13405 PF00890 FAD binding domain APS46_RS13410 PF05175 Methyltransferase small domain APS46_RS13415 PF00270 DEAD/DEAH box helicase APS46_RS13415 PF00271 Helicase conserved C-terminal domain APS46_RS13420 PF03466 LysR substrate binding domain APS46_RS13420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS13425 PF01810 LysE type translocator APS46_RS13430 PF01228 Glycine radical APS46_RS13435 PF03167 Uracil DNA glycosylase superfamily APS46_RS13440 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS46_RS13440 PF00588 SpoU rRNA Methylase family APS46_RS13445 PF00085 Thioredoxin APS46_RS13450 PF03942 DTW domain APS46_RS13455 PF13380 CoA binding domain APS46_RS13455 PF00583 Acetyltransferase (GNAT) family APS46_RS13455 PF13607 Succinyl-CoA ligase like flavodoxin domain APS46_RS13460 PF13091 PLD-like domain APS46_RS13465 PF10043 Predicted periplasmic lipoprotein (DUF2279) APS46_RS13470 PF00083 Sugar (and other) transporter APS46_RS13500 PF10431 C-terminal, D2-small domain, of ClpB protein APS46_RS13500 PF02861 Clp amino terminal domain, pathogenicity island component APS46_RS13500 PF17871 AAA lid domain APS46_RS13500 PF07724 AAA domain (Cdc48 subfamily) APS46_RS13500 PF00004 ATPase family associated with various cellular activities (AAA) APS46_RS13505 PF02578 Multi-copper polyphenol oxidoreductase laccase APS46_RS13510 PF00849 RNA pseudouridylate synthase APS46_RS13510 PF01479 S4 domain APS46_RS13515 PF13525 Outer membrane lipoprotein APS46_RS13520 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APS46_RS13525 PF01817 Chorismate mutase type II APS46_RS13525 PF00800 Prephenate dehydratase APS46_RS13530 PF08450 SMP-30/Gluconolactonase/LRE-like region APS46_RS13535 PF01817 Chorismate mutase type II APS46_RS13535 PF02153 Prephenate dehydrogenase APS46_RS13540 PF00793 DAHP synthetase I family APS46_RS13545 PF13689 YfiR/HmsC-like APS46_RS13550 PF00990 Diguanylate cyclase, GGDEF domain APS46_RS13550 PF17152 Periplasmic sensor domain APS46_RS13555 PF01245 Ribosomal protein L19 APS46_RS13560 PF01746 tRNA (Guanine-1)-methyltransferase APS46_RS13565 PF01782 RimM N-terminal domain APS46_RS13565 PF05239 PRC-barrel domain APS46_RS13570 PF00886 Ribosomal protein S16 APS46_RS13575 PF02978 Signal peptide binding domain APS46_RS13575 PF02881 SRP54-type protein, helical bundle domain APS46_RS13575 PF00448 SRP54-type protein, GTPase domain APS46_RS13580 PF01578 Cytochrome C assembly protein APS46_RS13585 PF00571 CBS domain APS46_RS13585 PF03471 Transporter associated domain APS46_RS13585 PF01595 Cyclin M transmembrane N-terminal domain APS46_RS13595 PF01025 GrpE APS46_RS13600 PF01513 ATP-NAD kinase APS46_RS13605 PF02463 RecF/RecN/SMC N terminal domain APS46_RS13610 PF04355 SmpA / OmlA family APS46_RS13615 PF03658 RnfH family Ubiquitin APS46_RS13620 PF03364 Polyketide cyclase / dehydrase and lipid transport APS46_RS13625 PF01668 SmpB protein APS46_RS13640 PF00664 ABC transporter transmembrane region APS46_RS13640 PF00005 ABC transporter APS46_RS13645 PF00529 HlyD membrane-fusion protein of T1SS APS46_RS13645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS46_RS13655 PF13356 Arm DNA-binding domain APS46_RS13655 PF00589 Phage integrase family APS46_RS13660 PF00589 Phage integrase family APS46_RS13660 PF13356 Arm DNA-binding domain APS46_RS13690 PF00005 ABC transporter APS46_RS13705 PF13693 Winged helix-turn-helix DNA-binding APS46_RS13710 PF03608 PTS system enzyme II sorbitol-specific factor APS46_RS13720 PF03612 Sorbitol phosphotransferase enzyme II N-terminus APS46_RS13720 PF07663 Sorbitol phosphotransferase enzyme II C-terminus APS46_RS13725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS46_RS13725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS46_RS13735 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APS46_RS13740 PF01380 SIS domain APS46_RS13750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APS46_RS13750 PF00367 phosphotransferase system, EIIB APS46_RS13750 PF02378 Phosphotransferase system, EIIC APS46_RS13785 PF13683 Integrase core domain APS46_RS13785 PF13276 HTH-like domain APS46_RS13795 PF01527 Transposase APS46_RS13810 PF01527 Transposase APS46_RS13815 PF13333 Integrase core domain APS46_RS13815 PF00665 Integrase core domain APS46_RS13815 PF13276 HTH-like domain APS46_RS13820 PF03614 Repressor of phase-1 flagellin APS46_RS13825 PF00669 Bacterial flagellin N-terminal helical region APS46_RS13825 PF08884 Flagellin D3 domain APS46_RS13825 PF00700 Bacterial flagellin C-terminal helical region APS46_RS13830 PF02796 Helix-turn-helix domain of resolvase APS46_RS13830 PF00239 Resolvase, N terminal domain APS46_RS13835 PF06722 Protein of unknown function (DUF1205) APS46_RS13840 PF00664 ABC transporter transmembrane region APS46_RS13840 PF00005 ABC transporter APS46_RS13850 PF00756 Putative esterase APS46_RS13855 PF00593 TonB dependent receptor APS46_RS13855 PF07715 TonB-dependent Receptor Plug Domain APS46_RS13865 PF00805 Pentapeptide repeats (8 copies) APS46_RS13870 PF04393 Protein of unknown function (DUF535) APS46_RS13885 PF03824 High-affinity nickel-transport protein APS46_RS13890 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS13890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS13895 PF00486 Transcriptional regulatory protein, C terminal APS46_RS13895 PF00072 Response regulator receiver domain APS46_RS13915 PF01970 Tripartite tricarboxylate transporter TctA family APS46_RS13920 PF08943 CsiD APS46_RS13925 PF01266 FAD dependent oxidoreductase APS46_RS13930 PF00171 Aldehyde dehydrogenase family APS46_RS13935 PF00202 Aminotransferase class-III APS46_RS13940 PF00324 Amino acid permease APS46_RS13945 PF00392 Bacterial regulatory proteins, gntR family APS46_RS13945 PF07729 FCD domain APS46_RS13950 PF04972 BON domain APS46_RS13950 PF01476 LysM domain APS46_RS13955 PF01679 Proteolipid membrane potential modulator APS46_RS13960 PF01022 Bacterial regulatory protein, arsR family APS46_RS13965 PF00581 Rhodanese-like domain APS46_RS13965 PF11127 Protein of unknown function (DUF2892) APS46_RS13975 PF00816 H-NS histone family APS46_RS13980 PF06610 L-alanine exporter APS46_RS13985 PF09400 Protein of unknown function (DUF2002) APS46_RS13990 PF05957 Bacterial protein of unknown function (DUF883) APS46_RS13995 PF00392 Bacterial regulatory proteins, gntR family APS46_RS13995 PF00155 Aminotransferase class I and II APS46_RS14000 PF02627 Carboxymuconolactone decarboxylase family APS46_RS14010 PF00462 Glutaredoxin APS46_RS14015 PF07972 NrdI Flavodoxin like APS46_RS14020 PF08343 Ribonucleotide reductase N-terminal APS46_RS14020 PF00317 Ribonucleotide reductase, all-alpha domain APS46_RS14020 PF02867 Ribonucleotide reductase, barrel domain APS46_RS14025 PF00268 Ribonucleotide reductase, small chain APS46_RS14030 PF00005 ABC transporter APS46_RS14030 PF00571 CBS domain APS46_RS14035 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS14040 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APS46_RS14045 PF07690 Major Facilitator Superfamily APS46_RS14050 PF01047 MarR family APS46_RS14055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS46_RS14055 PF00529 HlyD membrane-fusion protein of T1SS APS46_RS14060 PF07690 Major Facilitator Superfamily APS46_RS14070 PF02664 S-Ribosylhomocysteinase (LuxS) APS46_RS14075 PF04262 Glutamate-cysteine ligase APS46_RS14080 PF09335 SNARE associated Golgi protein APS46_RS14085 PF13419 Haloacid dehalogenase-like hydrolase APS46_RS14115 PF02599 Global regulator protein family APS46_RS14120 PF02272 DHHA1 domain APS46_RS14120 PF01411 tRNA synthetases class II (A) APS46_RS14120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS46_RS14125 PF02631 RecX family APS46_RS14130 PF00154 recA bacterial DNA recombination protein APS46_RS14135 PF02464 Competence-damaged protein APS46_RS14140 PF13406 Transglycosylase SLT domain APS46_RS14145 PF03608 PTS system enzyme II sorbitol-specific factor APS46_RS14150 PF03612 Sorbitol phosphotransferase enzyme II N-terminus APS46_RS14150 PF07663 Sorbitol phosphotransferase enzyme II C-terminus APS46_RS14155 PF03829 PTS system glucitol/sorbitol-specific IIA component APS46_RS14160 PF00106 short chain dehydrogenase APS46_RS14165 PF06923 Glucitol operon activator protein (GutM) APS46_RS14175 PF00455 DeoR C terminal sensor domain APS46_RS14175 PF08220 DeoR-like helix-turn-helix domain APS46_RS14180 PF00571 CBS domain APS46_RS14180 PF01380 SIS domain APS46_RS14185 PF01590 GAF domain APS46_RS14185 PF00158 Sigma-54 interaction domain APS46_RS14190 PF00753 Metallo-beta-lactamase superfamily APS46_RS14190 PF00258 Flavodoxin APS46_RS14190 PF00301 Rubredoxin APS46_RS14195 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS14195 PF18113 Rubredoxin binding C-terminal domain APS46_RS14200 PF00708 Acylphosphatase APS46_RS14200 PF07503 HypF finger APS46_RS14200 PF01300 Telomere recombination APS46_RS14200 PF17788 HypF Kae1-like domain APS46_RS14205 PF12800 4Fe-4S binding domain APS46_RS14205 PF13247 4Fe-4S dicluster domain APS46_RS14215 PF01750 Hydrogenase maturation protease APS46_RS14220 PF07450 Formate hydrogenlyase maturation protein HycH APS46_RS14225 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APS46_RS14230 PF12838 4Fe-4S dicluster domain APS46_RS14235 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit APS46_RS14235 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APS46_RS14235 PF00374 Nickel-dependent hydrogenase APS46_RS14240 PF00146 NADH dehydrogenase APS46_RS14245 PF00361 Proton-conducting membrane transporter APS46_RS14250 PF13247 4Fe-4S dicluster domain APS46_RS14255 PF11046 Transcriptional repressor of hyc and hyp operons APS46_RS14260 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA APS46_RS14265 PF02492 CobW/HypB/UreG, nucleotide-binding domain APS46_RS14270 PF01455 HupF/HypC family APS46_RS14275 PF01924 Hydrogenase formation hypA family APS46_RS14280 PF02769 AIR synthase related protein, C-terminal domain APS46_RS14280 PF00586 AIR synthase related protein, N-terminal domain APS46_RS14285 PF00158 Sigma-54 interaction domain APS46_RS14285 PF02954 Bacterial regulatory protein, Fis family APS46_RS14285 PF01590 GAF domain APS46_RS14290 PF11756 Nitrous oxide-stimulated promoter APS46_RS14295 PF01297 Zinc-uptake complex component A periplasmic APS46_RS14300 PF00005 ABC transporter APS46_RS14305 PF00950 ABC 3 transport family APS46_RS14310 PF00950 ABC 3 transport family APS46_RS14315 PF03421 YopJ Serine/Threonine acetyltransferase APS46_RS14325 PF12833 Helix-turn-helix domain APS46_RS14340 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) APS46_RS14345 PF01514 Secretory protein of YscJ/FliF family APS46_RS14355 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF APS46_RS14360 PF09480 Type III secretion system protein PrgH-EprH (PrgH) APS46_RS14365 PF12833 Helix-turn-helix domain APS46_RS14370 PF00486 Transcriptional regulatory protein, C terminal APS46_RS14375 PF01464 Transglycosylase SLT domain APS46_RS14385 PF05932 Tir chaperone protein (CesT) family APS46_RS14395 PF00550 Phosphopantetheine attachment site APS46_RS14400 PF09052 SipA N-terminal domain APS46_RS14405 PF06511 Type III secretion systems tip complex components APS46_RS14410 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) APS46_RS14415 PF04888 Secretion system effector C (SseC) like family APS46_RS14415 PF16535 Type III cell invasion protein SipB APS46_RS14420 PF07720 Tetratricopeptide repeat APS46_RS14425 PF01312 FlhB HrpN YscU SpaS Family APS46_RS14430 PF01311 Bacterial export proteins, family 1 APS46_RS14435 PF01313 Bacterial export proteins, family 3 APS46_RS14440 PF00813 FliP family APS46_RS14445 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APS46_RS14450 PF02510 Surface presentation of antigens protein APS46_RS14455 PF02090 Salmonella surface presentation of antigen gene type M protein APS46_RS14460 PF18269 T3SS EscN ATPase C-terminal domain APS46_RS14460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS46_RS14460 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS46_RS14465 PF03519 Invasion protein B family APS46_RS14470 PF00771 FHIPEP family APS46_RS14475 PF07201 HrpJ-like domain APS46_RS14480 PF00263 Bacterial type II and III secretion system protein APS46_RS14480 PF03958 Bacterial type II/III secretion system short domain APS46_RS14485 PF12833 Helix-turn-helix domain APS46_RS14490 PF04741 InvH outer membrane lipoprotein APS46_RS14520 PF13737 Transposase DDE domain APS46_RS14525 PF00149 Calcineurin-like phosphoesterase APS46_RS14535 PF01624 MutS domain I APS46_RS14535 PF05192 MutS domain III APS46_RS14535 PF05188 MutS domain II APS46_RS14535 PF00488 MutS domain V APS46_RS14535 PF05190 MutS family domain IV APS46_RS14545 PF07690 Major Facilitator Superfamily APS46_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS14550 PF03466 LysR substrate binding domain APS46_RS14555 PF02447 GntP family permease APS46_RS14560 PF01370 NAD dependent epimerase/dehydratase family APS46_RS14565 PF01261 Xylose isomerase-like TIM barrel APS46_RS14570 PF00596 Class II Aldolase and Adducin N-terminal domain APS46_RS14575 PF17042 Nucleotide-binding C-terminal domain APS46_RS14575 PF07005 Sugar-binding N-terminal domain APS46_RS14580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APS46_RS14580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS46_RS14585 PF08220 DeoR-like helix-turn-helix domain APS46_RS14585 PF00455 DeoR C terminal sensor domain APS46_RS14590 PF01047 MarR family APS46_RS14595 PF02441 Flavoprotein APS46_RS14600 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase APS46_RS14610 PF00140 Sigma-70 factor, region 1.2 APS46_RS14610 PF04542 Sigma-70 region 2 APS46_RS14610 PF04539 Sigma-70 region 3 APS46_RS14610 PF04545 Sigma-70, region 4 APS46_RS14615 PF01476 LysM domain APS46_RS14615 PF01551 Peptidase family M23 APS46_RS14625 PF01975 Survival protein SurE APS46_RS14630 PF01142 tRNA pseudouridine synthase D (TruD) APS46_RS14635 PF02542 YgbB family APS46_RS14640 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APS46_RS14645 PF04977 Septum formation initiator APS46_RS14650 PF12084 Protein of unknown function (DUF3561) APS46_RS14660 PF00009 Elongation factor Tu GTP binding domain APS46_RS14665 PF01507 Phosphoadenosine phosphosulfate reductase family APS46_RS14670 PF04389 Peptidase family M28 APS46_RS14675 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) APS46_RS14680 PF01867 CRISPR associated protein Cas1 APS46_RS14690 PF09704 CRISPR-associated protein (Cas_Cas5) APS46_RS14695 PF09344 CT1975-like protein APS46_RS14705 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) APS46_RS14710 PF00271 Helicase conserved C-terminal domain APS46_RS14710 PF18019 HD domain APS46_RS14710 PF00270 DEAD/DEAH box helicase APS46_RS14715 PF11047 Salmonella outer protein D APS46_RS14720 PF01507 Phosphoadenosine phosphosulfate reductase family APS46_RS14725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APS46_RS14725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS46_RS14730 PF00258 Flavodoxin APS46_RS14730 PF00175 Oxidoreductase NAD-binding domain APS46_RS14730 PF00667 FAD binding domain APS46_RS14735 PF01242 6-pyruvoyl tetrahydropterin synthase APS46_RS14740 PF03099 Biotin/lipoate A/B protein ligase family APS46_RS14740 PF12706 Beta-lactamase superfamily domain APS46_RS14745 PF04055 Radical SAM superfamily APS46_RS14750 PF03952 Enolase, N-terminal domain APS46_RS14750 PF00113 Enolase, C-terminal TIM barrel domain APS46_RS14755 PF00117 Glutamine amidotransferase class-I APS46_RS14755 PF06418 CTP synthase N-terminus APS46_RS14760 PF03819 MazG nucleotide pyrophosphohydrolase domain APS46_RS14765 PF00419 Fimbrial protein APS46_RS14770 PF13953 PapC C-terminal domain APS46_RS14770 PF13954 PapC N-terminal domain APS46_RS14770 PF00577 Outer membrane usher protein APS46_RS14775 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS14775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS14780 PF00419 Fimbrial protein APS46_RS14790 PF00419 Fimbrial protein APS46_RS14815 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH APS46_RS14820 PF02824 TGS domain APS46_RS14820 PF04607 Region found in RelA / SpoT proteins APS46_RS14820 PF13291 ACT domain APS46_RS14825 PF05958 tRNA (Uracil-5-)-methyltransferase APS46_RS14825 PF01938 TRAM domain APS46_RS14830 PF00672 HAMP domain APS46_RS14830 PF00072 Response regulator receiver domain APS46_RS14830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS14830 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS14830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) APS46_RS14830 PF01627 Hpt domain APS46_RS14835 PF02595 Glycerate kinase family APS46_RS14840 PF13378 Enolase C-terminal domain-like APS46_RS14845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS46_RS14845 PF13378 Enolase C-terminal domain-like APS46_RS14850 PF07690 Major Facilitator Superfamily APS46_RS14855 PF00258 Flavodoxin APS46_RS14860 PF00849 RNA pseudouridylate synthase APS46_RS14865 PF04287 tRNA pseudouridine synthase C APS46_RS14875 PF07348 Syd protein (SUKH-2) APS46_RS14880 PF14489 QueF-like protein APS46_RS14880 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term APS46_RS14885 PF11892 Domain of unknown function (DUF3412) APS46_RS14885 PF03641 Possible lysine decarboxylase APS46_RS14885 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases APS46_RS14895 PF03315 Serine dehydratase beta chain APS46_RS14895 PF03313 Serine dehydratase alpha chain APS46_RS14900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APS46_RS14900 PF01367 5'-3' exonuclease, C-terminal SAM fold APS46_RS14905 PF00465 Iron-containing alcohol dehydrogenase APS46_RS14910 PF00596 Class II Aldolase and Adducin N-terminal domain APS46_RS14915 PF07690 Major Facilitator Superfamily APS46_RS14920 PF07881 L-fucose isomerase, first N-terminal domain APS46_RS14920 PF02952 L-fucose isomerase, C-terminal domain APS46_RS14920 PF07882 L-fucose isomerase, second N-terminal domain APS46_RS14925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS46_RS14925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS46_RS14930 PF05025 RbsD / FucU transport protein family APS46_RS14935 PF00455 DeoR C terminal sensor domain APS46_RS14935 PF08220 DeoR-like helix-turn-helix domain APS46_RS14940 PF01728 FtsJ-like methyltransferase APS46_RS14940 PF18125 RlmM ferredoxin-like domain APS46_RS14945 PF04241 Protein of unknown function (DUF423) APS46_RS14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS14950 PF03466 LysR substrate binding domain APS46_RS14955 PF06004 Bacterial protein of unknown function (DUF903) APS46_RS14960 PF00266 Aminotransferase class-V APS46_RS14965 PF02657 Fe-S metabolism associated domain APS46_RS14970 PF00892 EamA-like transporter family APS46_RS14975 PF00899 ThiF family APS46_RS14980 PF06725 3D domain APS46_RS14980 PF03562 MltA specific insert domain APS46_RS14995 PF11741 AMIN domain APS46_RS14995 PF01520 N-acetylmuramoyl-L-alanine amidase APS46_RS15000 PF00696 Amino acid kinase family APS46_RS15000 PF00583 Acetyltransferase (GNAT) family APS46_RS15005 PF13538 UvrD-like helicase C-terminal domain APS46_RS15010 PF12705 PD-(D/E)XK nuclease superfamily APS46_RS15010 PF00580 UvrD/REP helicase N-terminal domain APS46_RS15010 PF13361 UvrD-like helicase C-terminal domain APS46_RS15015 PF05193 Peptidase M16 inactive domain APS46_RS15015 PF00675 Insulinase (Peptidase family M16) APS46_RS15015 PF16187 Middle or third domain of peptidase_M16 APS46_RS15020 PF17946 RecC C-terminal domain APS46_RS15025 PF12528 Type II secretion prepilin peptidase dependent protein C APS46_RS15025 PF07963 Prokaryotic N-terminal methylation motif APS46_RS15030 PF10713 Protein of unknown function (DUF2509) APS46_RS15035 PF07963 Prokaryotic N-terminal methylation motif APS46_RS15040 PF07963 Prokaryotic N-terminal methylation motif APS46_RS15050 PF00303 Thymidylate synthase APS46_RS15055 PF01790 Prolipoprotein diacylglyceryl transferase APS46_RS15060 PF00391 PEP-utilising enzyme, mobile domain APS46_RS15060 PF01590 GAF domain APS46_RS15060 PF05524 PEP-utilising enzyme, N-terminal APS46_RS15060 PF02896 PEP-utilising enzyme, TIM barrel domain APS46_RS15065 PF00293 NUDIX domain APS46_RS15075 PF02976 DNA mismatch repair enzyme MutH APS46_RS15080 PF03741 Integral membrane protein TerC family APS46_RS15085 PF06004 Bacterial protein of unknown function (DUF903) APS46_RS15090 PF00248 Aldo/keto reductase family APS46_RS15095 PF07690 Major Facilitator Superfamily APS46_RS15100 PF00501 AMP-binding enzyme APS46_RS15100 PF01553 Acyltransferase APS46_RS15105 PF00356 Bacterial regulatory proteins, lacI family APS46_RS15110 PF00356 Bacterial regulatory proteins, lacI family APS46_RS15115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APS46_RS15115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APS46_RS15120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS15120 PF03466 LysR substrate binding domain APS46_RS15125 PF01177 Asp/Glu/Hydantoin racemase APS46_RS15130 PF00083 Sugar (and other) transporter APS46_RS15140 PF04962 KduI/IolB family APS46_RS15145 PF00108 Thiolase, N-terminal domain APS46_RS15145 PF02803 Thiolase, C-terminal domain APS46_RS15150 PF03466 LysR substrate binding domain APS46_RS15150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS15160 PF03222 Tryptophan/tyrosine permease family APS46_RS15165 PF02583 Metal-sensitive transcriptional repressor APS46_RS15170 PF03824 High-affinity nickel-transport protein APS46_RS15190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS15190 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS15195 PF00577 Outer membrane usher protein APS46_RS15195 PF13953 PapC C-terminal domain APS46_RS15195 PF13954 PapC N-terminal domain APS46_RS15200 PF00419 Fimbrial protein APS46_RS15210 PF13505 Outer membrane protein beta-barrel domain APS46_RS15215 PF01380 SIS domain APS46_RS15225 PF00834 Ribulose-phosphate 3 epimerase family APS46_RS15230 PF03611 PTS system sugar-specific permease component APS46_RS15235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS15240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS15245 PF08220 DeoR-like helix-turn-helix domain APS46_RS15245 PF00455 DeoR C terminal sensor domain APS46_RS15250 PF02502 Ribose/Galactose Isomerase APS46_RS15255 PF03611 PTS system sugar-specific permease component APS46_RS15260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS15265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS15265 PF02378 Phosphotransferase system, EIIC APS46_RS15265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS15270 PF04198 Putative sugar-binding domain APS46_RS15275 PF03960 ArsC family APS46_RS15280 PF01022 Bacterial regulatory protein, arsR family APS46_RS15285 PF14659 Phage integrase, N-terminal SAM-like domain APS46_RS15285 PF13356 Arm DNA-binding domain APS46_RS15285 PF00589 Phage integrase family APS46_RS15295 PF01476 LysM domain APS46_RS15295 PF01551 Peptidase family M23 APS46_RS15300 PF00293 NUDIX domain APS46_RS15305 PF00152 tRNA synthetases class II (D, K and N) APS46_RS15305 PF01336 OB-fold nucleic acid binding domain APS46_RS15310 PF03462 PCRF domain APS46_RS15310 PF00472 RF-1 domain APS46_RS15315 PF17768 RecJ OB domain APS46_RS15315 PF01368 DHH family APS46_RS15315 PF02272 DHHA1 domain APS46_RS15320 PF10411 Disulfide bond isomerase protein N-terminus APS46_RS15320 PF13098 Thioredoxin-like domain APS46_RS15325 PF02899 Phage integrase, N-terminal SAM-like domain APS46_RS15325 PF00589 Phage integrase family APS46_RS15330 PF00258 Flavodoxin APS46_RS15335 PF07254 Membrane-bound toxin component of toxin-antitoxin system APS46_RS15340 PF03937 Flavinator of succinate dehydrogenase APS46_RS15350 PF01571 Aminomethyltransferase folate-binding domain APS46_RS15355 PF03006 Haemolysin-III related APS46_RS15360 PF04266 ASCH domain APS46_RS15365 PF00232 Glycosyl hydrolase family 1 APS46_RS15375 PF02347 Glycine cleavage system P-protein APS46_RS15380 PF01597 Glycine cleavage H-protein APS46_RS15385 PF08669 Glycine cleavage T-protein C-terminal barrel domain APS46_RS15385 PF01571 Aminomethyltransferase folate-binding domain APS46_RS15390 PF01494 FAD binding domain APS46_RS15395 PF01494 FAD binding domain APS46_RS15400 PF00557 Metallopeptidase family M24 APS46_RS15400 PF05195 Aminopeptidase P, N-terminal domain APS46_RS15405 PF03695 Uncharacterised protein family (UPF0149) APS46_RS15410 PF05164 Cell division protein ZapA APS46_RS15420 PF01812 5-formyltetrahydrofolate cyclo-ligase family APS46_RS15425 PF01842 ACT domain APS46_RS15425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS46_RS15425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS46_RS15430 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) APS46_RS15435 PF03466 LysR substrate binding domain APS46_RS15435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS15440 PF04402 Protein of unknown function (DUF541) APS46_RS15445 PF01810 LysE type translocator APS46_RS15450 PF00924 Mechanosensitive ion channel APS46_RS15450 PF05552 Conserved TM helix APS46_RS15455 PF01116 Fructose-bisphosphate aldolase class-II APS46_RS15460 PF00162 Phosphoglycerate kinase APS46_RS15465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APS46_RS15465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APS46_RS15485 PF00005 ABC transporter APS46_RS15490 PF00005 ABC transporter APS46_RS15495 PF02779 Transketolase, pyrimidine binding domain APS46_RS15495 PF00456 Transketolase, thiamine diphosphate binding domain APS46_RS15495 PF02780 Transketolase, C-terminal domain APS46_RS15500 PF01435 Peptidase family M48 APS46_RS15505 PF00491 Arginase family APS46_RS15510 PF12697 Alpha/beta hydrolase family APS46_RS15515 PF04074 YhcH/YjgK/YiaL APS46_RS15520 PF02615 Malate/L-lactate dehydrogenase APS46_RS15525 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS15525 PF00107 Zinc-binding dehydrogenase APS46_RS15530 PF01232 Mannitol dehydrogenase Rossmann domain APS46_RS15530 PF08125 Mannitol dehydrogenase C-terminal domain APS46_RS15535 PF13378 Enolase C-terminal domain-like APS46_RS15535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS46_RS15540 PF00392 Bacterial regulatory proteins, gntR family APS46_RS15540 PF07729 FCD domain APS46_RS15550 PF17810 Arginine decarboxylase helical bundle domain APS46_RS15550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APS46_RS15550 PF17944 Arginine decarboxylase C-terminal helical extension APS46_RS15565 PF02773 S-adenosylmethionine synthetase, C-terminal domain APS46_RS15565 PF00438 S-adenosylmethionine synthetase, N-terminal domain APS46_RS15565 PF02772 S-adenosylmethionine synthetase, central domain APS46_RS15570 PF00083 Sugar (and other) transporter APS46_RS15575 PF10263 SprT-like family APS46_RS15575 PF17283 SprT-like zinc ribbon domain APS46_RS15580 PF04231 Endonuclease I APS46_RS15585 PF04452 RNA methyltransferase APS46_RS15590 PF02951 Prokaryotic glutathione synthetase, N-terminal domain APS46_RS15590 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain APS46_RS15595 PF02622 Uncharacterized ACR, COG1678 APS46_RS15600 PF03652 Holliday junction resolvase APS46_RS15610 PF00437 Type II/IV secretion system protein APS46_RS15615 PF01168 Alanine racemase, N-terminal domain APS46_RS15620 PF02325 YGGT family APS46_RS15625 PF02594 Uncharacterised ACR, YggU family COG1872 APS46_RS15630 PF01725 Ham1 family APS46_RS15635 PF04055 Radical SAM superfamily APS46_RS15635 PF06969 HemN C-terminal domain APS46_RS15640 PF06717 Protein of unknown function (DUF1202) APS46_RS15645 PF17763 Glutaminase/Asparaginase C-terminal domain APS46_RS15645 PF00710 Asparaginase, N-terminal APS46_RS15650 PF11101 Protein of unknown function (DUF2884) APS46_RS15655 PF04320 Protein with unknown function (DUF469) APS46_RS15660 PF02390 Putative methyltransferase APS46_RS15665 PF00730 HhH-GPD superfamily base excision DNA repair protein APS46_RS15665 PF00633 Helix-hairpin-helix motif APS46_RS15665 PF14815 NUDIX domain APS46_RS15670 PF04362 Bacterial Fe(2+) trafficking APS46_RS15675 PF01464 Transglycosylase SLT domain APS46_RS15675 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain APS46_RS15680 PF03825 Nucleoside H+ symporter APS46_RS15685 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain APS46_RS15685 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain APS46_RS15685 PF01276 Orn/Lys/Arg decarboxylase, major domain APS46_RS15695 PF04474 Protein of unknown function (DUF554) APS46_RS15705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS46_RS15710 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain APS46_RS15710 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain APS46_RS15715 PF01575 MaoC like domain APS46_RS15720 PF03328 HpcH/HpaI aldolase/citrate lyase family APS46_RS15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS15725 PF03466 LysR substrate binding domain APS46_RS15730 PF00884 Sulfatase APS46_RS15735 PF04055 Radical SAM superfamily APS46_RS15740 PF00196 Bacterial regulatory proteins, luxR family APS46_RS15750 PF13520 Amino acid permease APS46_RS15760 PF01266 FAD dependent oxidoreductase APS46_RS15765 PF00171 Aldehyde dehydrogenase family APS46_RS15770 PF04965 Gene 25-like lysozyme APS46_RS15780 PF01522 Polysaccharide deacetylase APS46_RS15790 PF07690 Major Facilitator Superfamily APS46_RS15795 PF03786 D-mannonate dehydratase (UxuA) APS46_RS15800 PF08125 Mannitol dehydrogenase C-terminal domain APS46_RS15800 PF01232 Mannitol dehydrogenase Rossmann domain APS46_RS15805 PF02614 Glucuronate isomerase APS46_RS15815 PF05257 CHAP domain APS46_RS15815 PF03738 Glutathionylspermidine synthase preATP-grasp APS46_RS15820 PF02798 Glutathione S-transferase, N-terminal domain APS46_RS15830 PF01497 Periplasmic binding protein APS46_RS15835 PF01455 HupF/HypC family APS46_RS15840 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA APS46_RS15845 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE APS46_RS15850 PF01750 Hydrogenase maturation protease APS46_RS15855 PF00374 Nickel-dependent hydrogenase APS46_RS15860 PF03916 Polysulphide reductase, NrfD APS46_RS15865 PF13247 4Fe-4S dicluster domain APS46_RS15870 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal APS46_RS15870 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APS46_RS15875 PF11115 Protein of unknown function (DUF2623) APS46_RS15880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS46_RS15880 PF00672 HAMP domain APS46_RS15880 PF02203 Tar ligand binding domain homologue APS46_RS15885 PF03350 Uncharacterized protein family, UPF0114 APS46_RS15910 PF02472 Biopolymer transport protein ExbD/TolR APS46_RS15915 PF01618 MotA/TolQ/ExbB proton channel family APS46_RS15925 PF01053 Cys/Met metabolism PLP-dependent enzyme APS46_RS15930 PF09335 SNARE associated Golgi protein APS46_RS15935 PF06719 AraC-type transcriptional regulator N-terminus APS46_RS15935 PF12833 Helix-turn-helix domain APS46_RS15940 PF00465 Iron-containing alcohol dehydrogenase APS46_RS15945 PF00248 Aldo/keto reductase family APS46_RS15950 PF00939 Sodium:sulfate symporter transmembrane region APS46_RS15965 PF11842 Domain of unknown function (DUF3362) APS46_RS15965 PF08497 Radical SAM N-terminal APS46_RS15965 PF04055 Radical SAM superfamily APS46_RS15970 PF03480 Bacterial extracellular solute-binding protein, family 7 APS46_RS15980 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS46_RS15985 PF07731 Multicopper oxidase APS46_RS15985 PF00394 Multicopper oxidase APS46_RS15985 PF07732 Multicopper oxidase APS46_RS15990 PF01553 Acyltransferase APS46_RS15995 PF03989 DNA gyrase C-terminal domain, beta-propeller APS46_RS15995 PF00521 DNA gyrase/topoisomerase IV, subunit A APS46_RS16000 PF06445 GyrI-like small molecule binding domain APS46_RS16005 PF04076 Bacterial OB fold (BOF) protein APS46_RS16010 PF00072 Response regulator receiver domain APS46_RS16010 PF00486 Transcriptional regulatory protein, C terminal APS46_RS16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS16015 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS16015 PF08521 Two-component sensor kinase N-terminal APS46_RS16020 PF02525 Flavodoxin-like fold APS46_RS16025 PF03992 Antibiotic biosynthesis monooxygenase APS46_RS16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS16030 PF00986 DNA gyrase B subunit, carboxyl terminus APS46_RS16030 PF00204 DNA gyrase B APS46_RS16030 PF01751 Toprim domain APS46_RS16035 PF05728 Uncharacterised protein family (UPF0227) APS46_RS16040 PF00149 Calcineurin-like phosphoesterase APS46_RS16045 PF06853 Protein of unknown function (DUF1249) APS46_RS16050 PF00293 NUDIX domain APS46_RS16055 PF02321 Outer membrane efflux protein APS46_RS16060 PF06693 Protein of unknown function (DUF1190) APS46_RS16065 PF03738 Glutathionylspermidine synthase preATP-grasp APS46_RS16070 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase APS46_RS16075 PF02535 ZIP Zinc transporter APS46_RS16085 PF05935 Arylsulfotransferase (ASST) APS46_RS16085 PF17425 Arylsulfotransferase Ig-like domain APS46_RS16090 PF01323 DSBA-like thioredoxin domain APS46_RS16095 PF02600 Disulfide bond formation protein DsbB APS46_RS16100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase APS46_RS16105 PF04380 Membrane fusogenic activity APS46_RS16110 PF08971 Glycogen synthesis protein APS46_RS16115 PF07290 Protein of unknown function (DUF1449) APS46_RS16120 PF15975 Flotillin APS46_RS16120 PF01145 SPFH domain / Band 7 family APS46_RS16125 PF01467 Cytidylyltransferase-like APS46_RS16125 PF00294 pfkB family carbohydrate kinase APS46_RS16130 PF03710 Glutamate-ammonia ligase adenylyltransferase APS46_RS16130 PF08335 GlnD PII-uridylyltransferase APS46_RS16135 PF01928 CYTH domain APS46_RS16140 PF08239 Bacterial SH3 domain APS46_RS16145 PF12627 Probable RNA and SrmB- binding site of polymerase A APS46_RS16145 PF01966 HD domain APS46_RS16145 PF01743 Poly A polymerase head domain APS46_RS16150 PF02673 Bacitracin resistance protein BacA APS46_RS16155 PF02152 Dihydroneopterin aldolase APS46_RS16160 PF02660 Glycerol-3-phosphate acyltransferase APS46_RS16165 PF00814 Glycoprotease family APS46_RS16170 PF01165 Ribosomal protein S21 APS46_RS16175 PF10410 DnaB-helicase binding domain of primase APS46_RS16175 PF08278 DNA primase DnaG DnaB-binding APS46_RS16175 PF08275 DNA primase catalytic core, N-terminal domain APS46_RS16175 PF01807 CHC2 zinc finger APS46_RS16180 PF04542 Sigma-70 region 2 APS46_RS16180 PF03979 Sigma-70 factor, region 1.1 APS46_RS16180 PF04539 Sigma-70 region 3 APS46_RS16180 PF00140 Sigma-70 factor, region 1.2 APS46_RS16180 PF04546 Sigma-70, non-essential region APS46_RS16180 PF04545 Sigma-70, region 4 APS46_RS16185 PF03167 Uracil DNA glycosylase superfamily APS46_RS16195 PF04954 Siderophore-interacting protein APS46_RS16195 PF08021 Siderophore-interacting FAD-binding domain APS46_RS16200 PF03551 Transcriptional regulator PadR-like family APS46_RS16205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS46_RS16205 PF02203 Tar ligand binding domain homologue APS46_RS16205 PF00672 HAMP domain APS46_RS16210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS46_RS16210 PF08447 PAS fold APS46_RS16215 PF00202 Aminotransferase class-III APS46_RS16220 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS16220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APS46_RS16225 PF05175 Methyltransferase small domain APS46_RS16230 PF01863 Protein of unknown function DUF45 APS46_RS16235 PF02698 DUF218 domain APS46_RS16240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS46_RS16245 PF03741 Integral membrane protein TerC family APS46_RS16250 PF00375 Sodium:dicarboxylate symporter family APS46_RS16255 PF09335 SNARE associated Golgi protein APS46_RS16260 PF13721 SecD export protein N-terminal TM region APS46_RS16265 PF06476 Protein of unknown function (DUF1090) APS46_RS16270 PF05957 Bacterial protein of unknown function (DUF883) APS46_RS16275 PF07332 Putative Actinobacterial Holin-X, holin superfamily III APS46_RS16280 PF13997 YqjK-like protein APS46_RS16285 PF07681 DoxX APS46_RS16290 PF13409 Glutathione S-transferase, N-terminal domain APS46_RS16295 PF05656 Protein of unknown function (DUF805) APS46_RS16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS16300 PF03466 LysR substrate binding domain APS46_RS16305 PF02678 Pirin APS46_RS16305 PF17954 Quercetinase C-terminal cupin domain APS46_RS16315 PF03313 Serine dehydratase alpha chain APS46_RS16325 PF03313 Serine dehydratase alpha chain APS46_RS16325 PF03315 Serine dehydratase beta chain APS46_RS16330 PF02901 Pyruvate formate lyase-like APS46_RS16330 PF01228 Glycine radical APS46_RS16335 PF00871 Acetokinase family APS46_RS16340 PF03222 Tryptophan/tyrosine permease family APS46_RS16345 PF00291 Pyridoxal-phosphate dependent enzyme APS46_RS16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS16350 PF03466 LysR substrate binding domain APS46_RS16360 PF02595 Glycerate kinase family APS46_RS16365 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APS46_RS16365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS46_RS16370 PF03328 HpcH/HpaI aldolase/citrate lyase family APS46_RS16375 PF08666 SAF domain APS46_RS16375 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus APS46_RS16380 PF01116 Fructose-bisphosphate aldolase class-II APS46_RS16385 PF08013 Tagatose 6 phosphate kinase APS46_RS16390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS16395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS16400 PF03611 PTS system sugar-specific permease component APS46_RS16405 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS16405 PF00107 Zinc-binding dehydrogenase APS46_RS16410 PF08220 DeoR-like helix-turn-helix domain APS46_RS16415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS46_RS16420 PF04348 LppC putative lipoprotein APS46_RS16425 PF02021 Uncharacterised protein family UPF0102 APS46_RS16430 PF13580 SIS domain APS46_RS16435 PF04972 BON domain APS46_RS16440 PF13460 NAD(P)H-binding APS46_RS16445 PF01965 DJ-1/PfpI family APS46_RS16455 PF01541 GIY-YIG catalytic domain APS46_RS16460 PF13508 Acetyltransferase (GNAT) domain APS46_RS16465 PF02036 SCP-2 sterol transfer family APS46_RS16470 PF01136 Peptidase family U32 APS46_RS16475 PF01136 Peptidase family U32 APS46_RS16480 PF00296 Luciferase-like monooxygenase APS46_RS16485 PF03222 Tryptophan/tyrosine permease family APS46_RS16490 PF03880 DbpA RNA binding domain APS46_RS16490 PF00270 DEAD/DEAH box helicase APS46_RS16490 PF00271 Helicase conserved C-terminal domain APS46_RS16490 PF12343 Cold shock protein DEAD box A APS46_RS16495 PF07719 Tetratricopeptide repeat APS46_RS16495 PF13181 Tetratricopeptide repeat APS46_RS16500 PF01138 3' exoribonuclease family, domain 1 APS46_RS16500 PF03725 3' exoribonuclease family, domain 2 APS46_RS16500 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain APS46_RS16500 PF00575 S1 RNA binding domain APS46_RS16500 PF00013 KH domain APS46_RS16505 PF00312 Ribosomal protein S15 APS46_RS16510 PF16198 tRNA pseudouridylate synthase B C-terminal domain APS46_RS16510 PF01509 TruB family pseudouridylate synthase (N terminal domain) APS46_RS16510 PF09157 Pseudouridine synthase II TruB, C-terminal APS46_RS16515 PF02033 Ribosome-binding factor A APS46_RS16520 PF08364 Bacterial translation initiation factor IF-2 associated region APS46_RS16520 PF04760 Translation initiation factor IF-2, N-terminal region APS46_RS16520 PF00009 Elongation factor Tu GTP binding domain APS46_RS16520 PF11987 Translation-initiation factor 2 APS46_RS16525 PF08529 NusA N-terminal domain APS46_RS16525 PF13184 NusA-like KH domain APS46_RS16530 PF02576 RimP N-terminal domain APS46_RS16530 PF17384 RimP C-terminal SH3 domain APS46_RS16540 PF00764 Arginosuccinate synthase APS46_RS16555 PF03840 Preprotein translocase SecG subunit APS46_RS16560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS46_RS16560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS46_RS16560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS46_RS16560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS46_RS16565 PF00809 Pterin binding enzyme APS46_RS16570 PF17862 AAA+ lid domain APS46_RS16570 PF00004 ATPase family associated with various cellular activities (AAA) APS46_RS16570 PF06480 FtsH Extracellular APS46_RS16570 PF01434 Peptidase family M41 APS46_RS16575 PF01728 FtsJ-like methyltransferase APS46_RS16580 PF01985 CRS1 / YhbY (CRM) domain APS46_RS16585 PF03449 Transcription elongation factor, N-terminal APS46_RS16585 PF01272 Transcription elongation factor, GreA/GreB, C-term APS46_RS16595 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family APS46_RS16600 PF01018 GTP1/OBG APS46_RS16600 PF01926 50S ribosome-binding GTPase APS46_RS16605 PF00892 EamA-like transporter family APS46_RS16610 PF01016 Ribosomal L27 protein APS46_RS16615 PF00829 Ribosomal prokaryotic L21 protein APS46_RS16620 PF00348 Polyprenyl synthetase APS46_RS16625 PF13693 Winged helix-turn-helix DNA-binding APS46_RS16630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS46_RS16635 PF01722 BolA-like protein APS46_RS16640 PF13466 STAS domain APS46_RS16645 PF05494 MlaC protein APS46_RS16650 PF02470 MlaD protein APS46_RS16655 PF02405 Permease MlaE APS46_RS16660 PF00005 ABC transporter APS46_RS16665 PF01699 Sodium/calcium exchanger protein APS46_RS16670 PF01380 SIS domain APS46_RS16670 PF00571 CBS domain APS46_RS16680 PF06835 Lipopolysaccharide-assembly, LptC-related APS46_RS16685 PF03968 OstA-like protein APS46_RS16690 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS46_RS16690 PF00005 ABC transporter APS46_RS16695 PF00309 Sigma-54 factor, Activator interacting domain (AID) APS46_RS16695 PF04963 Sigma-54 factor, core binding domain APS46_RS16695 PF04552 Sigma-54, DNA binding domain APS46_RS16700 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APS46_RS16705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS16710 PF03668 P-loop ATPase protein family APS46_RS16715 PF00381 PTS HPr component phosphorylation site APS46_RS16720 PF10707 PhoP regulatory network protein YrbL APS46_RS16725 PF00912 Transglycosylase APS46_RS16735 PF18415 Histidine kinase receptor ArcB trans-membrane domain APS46_RS16735 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS16735 PF00072 Response regulator receiver domain APS46_RS16735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS16735 PF01627 Hpt domain APS46_RS16735 PF00989 PAS fold APS46_RS16740 PF04055 Radical SAM superfamily APS46_RS16740 PF16199 Radical_SAM C-terminal domain APS46_RS16750 PF00310 Glutamine amidotransferases class-II APS46_RS16750 PF01493 GXGXG motif APS46_RS16750 PF01645 Conserved region in glutamate synthase APS46_RS16750 PF04898 Glutamate synthase central domain APS46_RS16755 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS16755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APS46_RS16760 PF06250 YhcG PDDEXK nuclease domain APS46_RS16760 PF17761 DUF1016 N-terminal domain APS46_RS16765 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APS46_RS16770 PF07969 Amidohydrolase family APS46_RS16775 PF04074 YhcH/YjgK/YiaL APS46_RS16780 PF00480 ROK family APS46_RS16785 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase APS46_RS16790 PF07690 Major Facilitator Superfamily APS46_RS16795 PF00701 Dihydrodipicolinate synthetase family APS46_RS16800 PF07729 FCD domain APS46_RS16800 PF00392 Bacterial regulatory proteins, gntR family APS46_RS16805 PF04386 Stringent starvation protein B APS46_RS16810 PF02798 Glutathione S-transferase, N-terminal domain APS46_RS16810 PF00043 Glutathione S-transferase, C-terminal domain APS46_RS16815 PF00380 Ribosomal protein S9/S16 APS46_RS16820 PF00572 Ribosomal protein L13 APS46_RS16825 PF03969 AFG1-like ATPase APS46_RS16830 PF06295 Protein of unknown function (DUF1043) APS46_RS16835 PF13180 PDZ domain APS46_RS16835 PF00595 PDZ domain APS46_RS16840 PF13180 PDZ domain APS46_RS16845 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase APS46_RS16850 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit APS46_RS16855 PF00364 Biotin-requiring enzyme APS46_RS16855 PF00682 HMGL-like APS46_RS16855 PF02436 Conserved carboxylase domain APS46_RS16860 PF04277 Oxaloacetate decarboxylase, gamma chain APS46_RS16865 PF05683 Fumarase C-terminus APS46_RS16870 PF05681 Fumarate hydratase (Fumerase) APS46_RS16875 PF00939 Sodium:sulfate symporter transmembrane region APS46_RS16885 PF00392 Bacterial regulatory proteins, gntR family APS46_RS16885 PF07702 UTRA domain APS46_RS16890 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APS46_RS16890 PF00056 lactate/malate dehydrogenase, NAD binding domain APS46_RS16895 PF02863 Arginine repressor, C-terminal domain APS46_RS16895 PF01316 Arginine repressor, DNA binding domain APS46_RS16900 PF07338 Protein of unknown function (DUF1471) APS46_RS16905 PF07338 Protein of unknown function (DUF1471) APS46_RS16910 PF01337 Barstar (barnase inhibitor) APS46_RS16915 PF04632 Fusaric acid resistance protein family APS46_RS16920 PF13533 Biotin-lipoyl like APS46_RS16925 PF07869 Protein of unknown function (DUF1656) APS46_RS16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS16930 PF03466 LysR substrate binding domain APS46_RS16935 PF01523 Putative modulator of DNA gyrase APS46_RS16940 PF13116 Protein of unknown function APS46_RS16940 PF13502 AsmA-like C-terminal region APS46_RS16945 PF10150 Ribonuclease E/G family APS46_RS16945 PF00575 S1 RNA binding domain APS46_RS16950 PF02545 Maf-like protein APS46_RS16955 PF04093 rod shape-determining protein MreD APS46_RS16960 PF04085 rod shape-determining protein MreC APS46_RS16975 PF00563 EAL domain APS46_RS16975 PF17157 Gammaproteobacterial periplasmic sensor domain APS46_RS16975 PF00990 Diguanylate cyclase, GGDEF domain APS46_RS16980 PF00107 Zinc-binding dehydrogenase APS46_RS16980 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS16985 PF00174 Oxidoreductase molybdopterin binding domain APS46_RS16990 PF01794 Ferric reductase like transmembrane component APS46_RS16995 PF00364 Biotin-requiring enzyme APS46_RS17000 PF00289 Biotin carboxylase, N-terminal domain APS46_RS17000 PF02785 Biotin carboxylase C-terminal domain APS46_RS17000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS46_RS17005 PF06196 Protein of unknown function (DUF997) APS46_RS17010 PF00474 Sodium:solute symporter family APS46_RS17020 PF01207 Dihydrouridine synthase (Dus) APS46_RS17025 PF02954 Bacterial regulatory protein, Fis family APS46_RS17030 PF01555 DNA methylase APS46_RS17035 PF10831 Protein of unknown function (DUF2556) APS46_RS17040 PF03707 Bacterial signalling protein N terminal repeat APS46_RS17040 PF00990 Diguanylate cyclase, GGDEF domain APS46_RS17040 PF00563 EAL domain APS46_RS17045 PF00440 Bacterial regulatory proteins, tetR family APS46_RS17045 PF08361 MAATS-type transcriptional repressor, C-terminal region APS46_RS17050 PF00529 HlyD membrane-fusion protein of T1SS APS46_RS17050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS46_RS17055 PF00873 AcrB/AcrD/AcrF family APS46_RS17100 PF00132 Bacterial transferase hexapeptide (six repeats) APS46_RS17105 PF07369 Protein of unknown function (DUF1488) APS46_RS17110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain APS46_RS17110 PF01488 Shikimate / quinate 5-dehydrogenase APS46_RS17110 PF08501 Shikimate dehydrogenase substrate binding domain APS46_RS17115 PF01300 Telomere recombination APS46_RS17120 PF01396 Topoisomerase DNA binding C4 zinc finger APS46_RS17125 PF04361 Protein of unknown function (DUF494) APS46_RS17130 PF02481 DNA recombination-mediator protein A APS46_RS17130 PF17782 DprA winged helix domain APS46_RS17135 PF01327 Polypeptide deformylase APS46_RS17140 PF02911 Formyl transferase, C-terminal domain APS46_RS17140 PF00551 Formyl transferase APS46_RS17145 PF01189 16S rRNA methyltransferase RsmB/F APS46_RS17145 PF01029 NusB family APS46_RS17150 PF02080 TrkA-C domain APS46_RS17150 PF02254 TrkA-N domain APS46_RS17155 PF01741 Large-conductance mechanosensitive channel, MscL APS46_RS17160 PF03889 Alternative ribosome-rescue factor A APS46_RS17165 PF13411 MerR HTH family regulatory protein APS46_RS17170 PF09350 Domain of unknown function (DUF1992) APS46_RS17175 PF01196 Ribosomal protein L17 APS46_RS17180 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APS46_RS17180 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APS46_RS17180 PF01000 RNA polymerase Rpb3/RpoA insert domain APS46_RS17185 PF00163 Ribosomal protein S4/S9 N-terminal domain APS46_RS17185 PF01479 S4 domain APS46_RS17190 PF00411 Ribosomal protein S11 APS46_RS17195 PF00416 Ribosomal protein S13/S18 APS46_RS17200 PF00444 Ribosomal protein L36 APS46_RS17205 PF00344 SecY translocase APS46_RS17210 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A APS46_RS17215 PF00327 Ribosomal protein L30p/L7e APS46_RS17220 PF00333 Ribosomal protein S5, N-terminal domain APS46_RS17220 PF03719 Ribosomal protein S5, C-terminal domain APS46_RS17225 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast APS46_RS17230 PF00347 Ribosomal protein L6 APS46_RS17235 PF00410 Ribosomal protein S8 APS46_RS17240 PF00253 Ribosomal protein S14p/S29e APS46_RS17245 PF00281 Ribosomal protein L5 APS46_RS17245 PF00673 ribosomal L5P family C-terminus APS46_RS17250 PF00467 KOW motif APS46_RS17250 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 APS46_RS17255 PF00238 Ribosomal protein L14p/L23e APS46_RS17260 PF00366 Ribosomal protein S17 APS46_RS17265 PF00831 Ribosomal L29 protein APS46_RS17270 PF00252 Ribosomal protein L16p/L10e APS46_RS17275 PF07650 KH domain APS46_RS17275 PF00189 Ribosomal protein S3, C-terminal domain APS46_RS17280 PF00237 Ribosomal protein L22p/L17e APS46_RS17285 PF00203 Ribosomal protein S19 APS46_RS17290 PF00181 Ribosomal Proteins L2, RNA binding domain APS46_RS17290 PF03947 Ribosomal Proteins L2, C-terminal domain APS46_RS17295 PF00276 Ribosomal protein L23 APS46_RS17300 PF00573 Ribosomal protein L4/L1 family APS46_RS17305 PF00297 Ribosomal protein L3 APS46_RS17310 PF00338 Ribosomal protein S10p/S20e APS46_RS17315 PF01478 Type IV leader peptidase family APS46_RS17320 PF00210 Ferritin-like domain APS46_RS17325 PF04324 BFD-like [2Fe-2S] binding domain APS46_RS17330 PF03144 Elongation factor Tu domain 2 APS46_RS17330 PF00009 Elongation factor Tu GTP binding domain APS46_RS17330 PF03143 Elongation factor Tu C-terminal domain APS46_RS17335 PF14492 Elongation Factor G, domain II APS46_RS17335 PF00009 Elongation factor Tu GTP binding domain APS46_RS17335 PF03144 Elongation factor Tu domain 2 APS46_RS17335 PF03764 Elongation factor G, domain IV APS46_RS17335 PF00679 Elongation factor G C-terminus APS46_RS17340 PF00177 Ribosomal protein S7p/S5e APS46_RS17345 PF00164 Ribosomal protein S12/S23 APS46_RS17350 PF04077 DsrH like protein APS46_RS17355 PF02635 DsrE/DsrF-like family APS46_RS17360 PF02635 DsrE/DsrF-like family APS46_RS17365 PF13309 HTH domain APS46_RS17365 PF08348 YheO-like PAS domain APS46_RS17370 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APS46_RS17370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS46_RS17375 PF04102 SlyX APS46_RS17380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS46_RS17385 PF09526 Probable metal-binding protein (DUF2387) APS46_RS17390 PF00999 Sodium/hydrogen exchanger family APS46_RS17390 PF02254 TrkA-N domain APS46_RS17395 PF02525 Flavodoxin-like fold APS46_RS17400 PF12848 ABC transporter APS46_RS17400 PF00005 ABC transporter APS46_RS17405 PF03466 LysR substrate binding domain APS46_RS17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS17410 PF08803 Putative mono-oxygenase ydhR APS46_RS17415 PF00561 alpha/beta hydrolase fold APS46_RS17420 PF06794 Uncharacterised protein family (UPF0270) APS46_RS17425 PF00485 Phosphoribulokinase / Uridine kinase family APS46_RS17430 PF02566 OsmC-like protein APS46_RS17435 PF00027 Cyclic nucleotide-binding domain APS46_RS17435 PF13545 Crp-like helix-turn-helix domain APS46_RS17440 PF12805 FUSC-like inner membrane protein yccS APS46_RS17445 PF00202 Aminotransferase class-III APS46_RS17450 PF00117 Glutamine amidotransferase class-I APS46_RS17455 PF02661 Fic/DOC family APS46_RS17460 PF10832 Protein of unknown function (DUF2559) APS46_RS17465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APS46_RS17470 PF07690 Major Facilitator Superfamily APS46_RS17475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS46_RS17475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APS46_RS17475 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS17475 PF18267 Rubredoxin NAD+ reductase C-terminal domain APS46_RS17475 PF04324 BFD-like [2Fe-2S] binding domain APS46_RS17480 PF13806 Rieske-like [2Fe-2S] domain APS46_RS17485 PF01226 Formate/nitrite transporter APS46_RS17490 PF10414 Sirohaem synthase dimerisation region APS46_RS17490 PF14824 Sirohaem biosynthesis protein central APS46_RS17490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS46_RS17500 PF13978 Protein of unknown function (DUF4223) APS46_RS17505 PF00579 tRNA synthetases class I (W and Y) APS46_RS17510 PF13419 Haloacid dehalogenase-like hydrolase APS46_RS17515 PF00834 Ribulose-phosphate 3 epimerase family APS46_RS17520 PF02086 D12 class N6 adenine-specific DNA methyltransferase APS46_RS17525 PF05036 Sporulation related domain APS46_RS17530 PF01761 3-dehydroquinate synthase APS46_RS17535 PF01202 Shikimate kinase APS46_RS17540 PF00263 Bacterial type II and III secretion system protein APS46_RS17540 PF03958 Bacterial type II/III secretion system short domain APS46_RS17545 PF10748 DNA utilization proteins HofP APS46_RS17555 PF05137 Fimbrial assembly protein (PilN) APS46_RS17565 PF00905 Penicillin binding protein transpeptidase domain APS46_RS17565 PF00912 Transglycosylase APS46_RS17565 PF17092 Penicillin-binding protein OB-like domain APS46_RS17570 PF00293 NUDIX domain APS46_RS17575 PF07095 Intracellular growth attenuator protein IgaA APS46_RS17580 PF13419 Haloacid dehalogenase-like hydrolase APS46_RS17585 PF01479 S4 domain APS46_RS17590 PF01430 Hsp33 protein APS46_RS17595 PF13687 Domain of unknown function (DUF4153) APS46_RS17600 PF01293 Phosphoenolpyruvate carboxykinase APS46_RS17605 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS17605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS17605 PF00672 HAMP domain APS46_RS17610 PF00486 Transcriptional regulatory protein, C terminal APS46_RS17610 PF00072 Response regulator receiver domain APS46_RS17615 PF03449 Transcription elongation factor, N-terminal APS46_RS17615 PF01272 Transcription elongation factor, GreA/GreB, C-term APS46_RS17620 PF17674 HHH domain APS46_RS17620 PF00575 S1 RNA binding domain APS46_RS17620 PF09371 Tex-like protein N-terminal domain APS46_RS17620 PF16921 Tex protein YqgF-like domain APS46_RS17625 PF04023 FeoA domain APS46_RS17630 PF07664 Ferrous iron transport protein B C terminus APS46_RS17630 PF07670 Nucleoside recognition APS46_RS17630 PF02421 Ferrous iron transport protein B APS46_RS17630 PF17910 FeoB cytosolic helical domain APS46_RS17635 PF09012 FeoC like transcriptional regulator APS46_RS17640 PF04754 Putative transposase, YhgA-like APS46_RS17645 PF00561 alpha/beta hydrolase fold APS46_RS17650 PF00156 Phosphoribosyl transferase domain APS46_RS17655 PF01521 Iron-sulphur cluster biosynthesis APS46_RS17655 PF01106 NifU-like domain APS46_RS17660 PF02447 GntP family permease APS46_RS17665 PF02446 4-alpha-glucanotransferase APS46_RS17670 PF00343 Carbohydrate phosphorylase APS46_RS17675 PF00196 Bacterial regulatory proteins, luxR family APS46_RS17675 PF17874 MalT-like TPR region APS46_RS17680 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ APS46_RS17685 PF04221 RelB antitoxin APS46_RS17690 PF01137 RNA 3'-terminal phosphate cyclase APS46_RS17690 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain APS46_RS17695 PF01139 tRNA-splicing ligase RtcB APS46_RS17705 PF06956 Regulator of RNA terminal phosphate cyclase APS46_RS17705 PF00158 Sigma-54 interaction domain APS46_RS17710 PF08220 DeoR-like helix-turn-helix domain APS46_RS17710 PF00455 DeoR C terminal sensor domain APS46_RS17715 PF01694 Rhomboid family APS46_RS17715 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease APS46_RS17720 PF00581 Rhodanese-like domain APS46_RS17725 PF16901 C-terminal domain of alpha-glycerophosphate oxidase APS46_RS17725 PF01266 FAD dependent oxidoreductase APS46_RS17740 PF00465 Iron-containing alcohol dehydrogenase APS46_RS17745 PF07690 Major Facilitator Superfamily APS46_RS17750 PF00920 Dehydratase family APS46_RS17755 PF00701 Dihydrodipicolinate synthetase family APS46_RS17760 PF01614 Bacterial transcriptional regulator APS46_RS17760 PF09339 IclR helix-turn-helix domain APS46_RS17765 PF00343 Carbohydrate phosphorylase APS46_RS17770 PF00534 Glycosyl transferases group 1 APS46_RS17770 PF08323 Starch synthase catalytic domain APS46_RS17775 PF00483 Nucleotidyl transferase APS46_RS17780 PF18390 Glycogen debranching enzyme C-terminal domain APS46_RS17780 PF00128 Alpha amylase, catalytic domain APS46_RS17780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS46_RS17785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS46_RS17785 PF02806 Alpha amylase, C-terminal all-beta domain APS46_RS17785 PF00128 Alpha amylase, catalytic domain APS46_RS17790 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS46_RS17790 PF02774 Semialdehyde dehydrogenase, dimerisation domain APS46_RS17795 PF02447 GntP family permease APS46_RS17800 PF01202 Shikimate kinase APS46_RS17805 PF00356 Bacterial regulatory proteins, lacI family APS46_RS17805 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APS46_RS17810 PF02678 Pirin APS46_RS17810 PF17954 Quercetinase C-terminal cupin domain APS46_RS17815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS46_RS17815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS46_RS17820 PF00583 Acetyltransferase (GNAT) family APS46_RS17825 PF00294 pfkB family carbohydrate kinase APS46_RS17840 PF02126 Phosphotriesterase family APS46_RS17850 PF10956 Protein of unknown function (DUF2756) APS46_RS17855 PF03009 Glycerophosphoryl diester phosphodiesterase family APS46_RS17860 PF17912 MalK OB fold domain APS46_RS17860 PF00005 ABC transporter APS46_RS17865 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS17870 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS17875 PF13416 Bacterial extracellular solute-binding protein APS46_RS17885 PF00005 ABC transporter APS46_RS17890 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS46_RS17890 PF00005 ABC transporter APS46_RS17895 PF02653 Branched-chain amino acid transport system / permease component APS46_RS17895 PF11862 Domain of unknown function (DUF3382) APS46_RS17900 PF02653 Branched-chain amino acid transport system / permease component APS46_RS17905 PF13458 Periplasmic binding protein APS46_RS17910 PF12568 Acetyltransferase (GNAT) domain, PanZ APS46_RS17920 PF13458 Periplasmic binding protein APS46_RS17925 PF04545 Sigma-70, region 4 APS46_RS17925 PF04542 Sigma-70 region 2 APS46_RS17930 PF02687 FtsX-like permease family APS46_RS17930 PF18075 FtsX extracellular domain APS46_RS17935 PF00005 ABC transporter APS46_RS17940 PF02881 SRP54-type protein, helical bundle domain APS46_RS17940 PF00448 SRP54-type protein, GTPase domain APS46_RS17950 PF06611 Protein of unknown function (DUF1145) APS46_RS17955 PF10694 Protein of unknown function (DUF2500) APS46_RS17960 PF07947 YhhN family APS46_RS17965 PF00403 Heavy-metal-associated domain APS46_RS17970 PF00672 HAMP domain APS46_RS17970 PF02203 Tar ligand binding domain homologue APS46_RS17970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS46_RS17975 PF01206 Sulfurtransferase TusA APS46_RS17980 PF02592 Putative vitamin uptake transporter APS46_RS17985 PF08786 DcrB APS46_RS17990 PF07690 Major Facilitator Superfamily APS46_RS17995 PF01594 AI-2E family transporter APS46_RS18000 PF01648 4'-phosphopantetheinyl transferase superfamily APS46_RS18005 PF01402 Ribbon-helix-helix protein, copG family APS46_RS18005 PF08753 NikR C terminal nickel binding domain APS46_RS18015 PF00005 ABC transporter APS46_RS18020 PF13533 Biotin-lipoyl like APS46_RS18030 PF01384 Phosphate transporter family APS46_RS18035 PF10625 Universal stress protein B (UspB) APS46_RS18040 PF00582 Universal stress protein family APS46_RS18045 PF00854 POT family APS46_RS18050 PF04445 Putative SAM-dependent methyltransferase APS46_RS18055 PF01432 Peptidase family M3 APS46_RS18060 PF01569 PAP2 superfamily APS46_RS18065 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ APS46_RS18070 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS18070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS46_RS18075 PF00710 Asparaginase, N-terminal APS46_RS18075 PF17763 Glutaminase/Asparaginase C-terminal domain APS46_RS18080 PF03605 Anaerobic c4-dicarboxylate membrane transporter APS46_RS18085 PF00294 pfkB family carbohydrate kinase APS46_RS18090 PF01380 SIS domain APS46_RS18095 PF00392 Bacterial regulatory proteins, gntR family APS46_RS18095 PF07702 UTRA domain APS46_RS18100 PF01204 Trehalase APS46_RS18115 PF00196 Bacterial regulatory proteins, luxR family APS46_RS18120 PF03466 LysR substrate binding domain APS46_RS18120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS18125 PF03631 Virulence factor BrkB APS46_RS18130 PF00083 Sugar (and other) transporter APS46_RS18130 PF07690 Major Facilitator Superfamily APS46_RS18135 PF05170 AsmA family APS46_RS18140 PF00563 EAL domain APS46_RS18145 PF00294 pfkB family carbohydrate kinase APS46_RS18150 PF00675 Insulinase (Peptidase family M16) APS46_RS18150 PF05193 Peptidase M16 inactive domain APS46_RS18155 PF00375 Sodium:dicarboxylate symporter family APS46_RS18160 PF00672 HAMP domain APS46_RS18160 PF17154 Gammaproteobacterial periplasmic sensor domain APS46_RS18160 PF00563 EAL domain APS46_RS18160 PF00990 Diguanylate cyclase, GGDEF domain APS46_RS18165 PF13176 Tetratricopeptide repeat APS46_RS18165 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) APS46_RS18170 PF01270 Glycosyl hydrolases family 8 APS46_RS18175 PF03170 Bacterial cellulose synthase subunit APS46_RS18180 PF07238 PilZ domain APS46_RS18180 PF00535 Glycosyl transferase family 2 APS46_RS18185 PF06564 Cellulose biosynthesis protein BcsQ APS46_RS18190 PF10945 Cellulose biosynthesis protein BcsR APS46_RS18195 PF10995 Cellulose biosynthesis GIL APS46_RS18200 PF11120 Cellulose biosynthesis protein BcsF APS46_RS18205 PF11658 Cellulose biosynthesis protein BcsG APS46_RS18210 PF13940 Toxin Ldr, type I toxin-antitoxin system APS46_RS18215 PF01053 Cys/Met metabolism PLP-dependent enzyme APS46_RS18220 PF03222 Tryptophan/tyrosine permease family APS46_RS18225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS46_RS18225 PF00005 ABC transporter APS46_RS18230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS46_RS18230 PF00005 ABC transporter APS46_RS18235 PF12911 N-terminal TM domain of oligopeptide transport permease C APS46_RS18235 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS18240 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS18245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS46_RS18250 PF00860 Permease family APS46_RS18260 PF00356 Bacterial regulatory proteins, lacI family APS46_RS18275 PF00884 Sulfatase APS46_RS18275 PF08019 Phosphoethanolamine transferase EptA/EptB APS46_RS18280 PF00419 Fimbrial protein APS46_RS18285 PF00419 Fimbrial protein APS46_RS18290 PF13953 PapC C-terminal domain APS46_RS18290 PF13954 PapC N-terminal domain APS46_RS18290 PF00577 Outer membrane usher protein APS46_RS18295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS18295 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS18300 PF00419 Fimbrial protein APS46_RS18305 PF03797 Autotransporter beta-domain APS46_RS18310 PF03352 Methyladenine glycosylase APS46_RS18315 PF00583 Acetyltransferase (GNAT) family APS46_RS18320 PF18364 Molybdopterin oxidoreductase N-terminal domain APS46_RS18320 PF01568 Molydopterin dinucleotide binding domain APS46_RS18320 PF00384 Molybdopterin oxidoreductase APS46_RS18325 PF13488 Glycine zipper APS46_RS18325 PF00691 OmpA family APS46_RS18330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS46_RS18330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS46_RS18335 PF11254 Protein of unknown function (DUF3053) APS46_RS18340 PF01381 Helix-turn-helix APS46_RS18345 PF00313 'Cold-shock' DNA-binding domain APS46_RS18370 PF02092 Glycyl-tRNA synthetase beta subunit APS46_RS18370 PF05746 DALR anticodon binding domain APS46_RS18375 PF02091 Glycyl-tRNA synthetase alpha subunit APS46_RS18380 PF13983 YsaB-like lipoprotein APS46_RS18385 PF01757 Acyltransferase family APS46_RS18390 PF05360 yiaA/B two helix domain APS46_RS18395 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS46_RS18395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS46_RS18405 PF12833 Helix-turn-helix domain APS46_RS18410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase APS46_RS18420 PF00128 Alpha amylase, catalytic domain APS46_RS18425 PF00155 Aminotransferase class I and II APS46_RS18430 PF13247 4Fe-4S dicluster domain APS46_RS18435 PF09339 IclR helix-turn-helix domain APS46_RS18435 PF01614 Bacterial transcriptional regulator APS46_RS18440 PF02615 Malate/L-lactate dehydrogenase APS46_RS18445 PF04074 YhcH/YjgK/YiaL APS46_RS18450 PF16154 Domain of unknown function (DUF4862) APS46_RS18455 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component APS46_RS18460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS46_RS18465 PF03480 Bacterial extracellular solute-binding protein, family 7 APS46_RS18470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS46_RS18470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS46_RS18475 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APS46_RS18480 PF01261 Xylose isomerase-like TIM barrel APS46_RS18485 PF00596 Class II Aldolase and Adducin N-terminal domain APS46_RS18495 PF07944 Beta-L-arabinofuranosidase, GH127 APS46_RS18500 PF00171 Aldehyde dehydrogenase family APS46_RS18505 PF00480 ROK family APS46_RS18510 PF09106 Elongation factor SelB, winged helix APS46_RS18510 PF09107 Elongation factor SelB, winged helix APS46_RS18510 PF00009 Elongation factor Tu GTP binding domain APS46_RS18510 PF03144 Elongation factor Tu domain 2 APS46_RS18515 PF12390 Selenocysteine synthase N terminal APS46_RS18515 PF03841 L-seryl-tRNA selenium transferase APS46_RS18520 PF00043 Glutathione S-transferase, C-terminal domain APS46_RS18520 PF13417 Glutathione S-transferase, N-terminal domain APS46_RS18525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS18525 PF02378 Phosphotransferase system, EIIC APS46_RS18525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS18530 PF01232 Mannitol dehydrogenase Rossmann domain APS46_RS18530 PF08125 Mannitol dehydrogenase C-terminal domain APS46_RS18535 PF05068 Mannitol repressor APS46_RS18545 PF10928 Protein of unknown function (DUF2810) APS46_RS18550 PF11622 Protein of unknown function (DUF3251) APS46_RS18555 PF05662 Coiled stalk of trimeric autotransporter adhesin APS46_RS18555 PF05658 Head domain of trimeric autotransporter adhesin APS46_RS18555 PF03895 YadA-like membrane anchor domain APS46_RS18555 PF13018 Extended Signal Peptide of Type V secretion system APS46_RS18560 PF02652 L-lactate permease APS46_RS18565 PF07729 FCD domain APS46_RS18565 PF00392 Bacterial regulatory proteins, gntR family APS46_RS18570 PF01070 FMN-dependent dehydrogenase APS46_RS18575 PF00588 SpoU rRNA Methylase family APS46_RS18580 PF00356 Bacterial regulatory proteins, lacI family APS46_RS18585 PF13378 Enolase C-terminal domain-like APS46_RS18585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS46_RS18590 PF07690 Major Facilitator Superfamily APS46_RS18595 PF06426 Serine acetyltransferase, N-terminal APS46_RS18595 PF00132 Bacterial transferase hexapeptide (six repeats) APS46_RS18600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APS46_RS18600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APS46_RS18605 PF02556 Preprotein translocase subunit SecB APS46_RS18610 PF00462 Glutaredoxin APS46_RS18615 PF00581 Rhodanese-like domain APS46_RS18620 PF06415 BPG-independent PGAM N-terminus (iPGM_N) APS46_RS18620 PF01676 Metalloenzyme superfamily APS46_RS18625 PF01551 Peptidase family M23 APS46_RS18630 PF04748 Divergent polysaccharide deacetylase APS46_RS18635 PF00535 Glycosyl transferase family 2 APS46_RS18640 PF00107 Zinc-binding dehydrogenase APS46_RS18640 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS18645 PF00155 Aminotransferase class I and II APS46_RS18650 PF01370 NAD dependent epimerase/dehydratase family APS46_RS18655 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APS46_RS18660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APS46_RS18665 PF04932 O-Antigen ligase APS46_RS18670 PF00534 Glycosyl transferases group 1 APS46_RS18680 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) APS46_RS18685 PF08437 Glycosyl transferase family 8 C-terminal APS46_RS18685 PF01501 Glycosyl transferase family 8 APS46_RS18690 PF08437 Glycosyl transferase family 8 C-terminal APS46_RS18690 PF01501 Glycosyl transferase family 8 APS46_RS18695 PF00534 Glycosyl transferases group 1 APS46_RS18695 PF13439 Glycosyltransferase Family 4 APS46_RS18710 PF00534 Glycosyl transferases group 1 APS46_RS18710 PF13439 Glycosyltransferase Family 4 APS46_RS18715 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APS46_RS18720 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) APS46_RS18725 PF01467 Cytidylyltransferase-like APS46_RS18730 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APS46_RS18730 PF06827 Zinc finger found in FPG and IleRS APS46_RS18730 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APS46_RS18735 PF00471 Ribosomal protein L33 APS46_RS18740 PF00830 Ribosomal L28 family APS46_RS18745 PF04002 RadC-like JAB domain APS46_RS18750 PF04127 DNA / pantothenate metabolism flavoprotein APS46_RS18750 PF02441 Flavoprotein APS46_RS18755 PF00692 dUTPase APS46_RS18760 PF00440 Bacterial regulatory proteins, tetR family APS46_RS18765 PF00156 Phosphoribosyl transferase domain APS46_RS18770 PF01138 3' exoribonuclease family, domain 1 APS46_RS18770 PF03725 3' exoribonuclease family, domain 2 APS46_RS18775 PF08340 Domain of unknown function (DUF1732) APS46_RS18775 PF03755 YicC-like family, N-terminal region APS46_RS18780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS18780 PF03466 LysR substrate binding domain APS46_RS18790 PF03458 UPF0126 domain APS46_RS18795 PF03120 NAD-dependent DNA ligase OB-fold domain APS46_RS18795 PF01653 NAD-dependent DNA ligase adenylation domain APS46_RS18800 PF00625 Guanylate kinase APS46_RS18805 PF01192 RNA polymerase Rpb6 APS46_RS18810 PF13291 ACT domain APS46_RS18810 PF02824 TGS domain APS46_RS18810 PF04607 Region found in RelA / SpoT proteins APS46_RS18815 PF00588 SpoU rRNA Methylase family APS46_RS18815 PF12105 SpoU, rRNA methylase, C-terminal APS46_RS18820 PF00271 Helicase conserved C-terminal domain APS46_RS18820 PF00270 DEAD/DEAH box helicase APS46_RS18820 PF17191 RecG wedge domain APS46_RS18830 PF03616 Sodium/glutamate symporter APS46_RS18835 PF00860 Permease family APS46_RS18840 PF05170 AsmA family APS46_RS18845 PF01055 Glycosyl hydrolases family 31 APS46_RS18845 PF13802 Galactose mutarotase-like APS46_RS18865 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system APS46_RS18880 PF00196 Bacterial regulatory proteins, luxR family APS46_RS18885 PF03797 Autotransporter beta-domain APS46_RS18895 PF00486 Transcriptional regulatory protein, C terminal APS46_RS18900 PF00857 Isochorismatase family APS46_RS18910 PF00690 Cation transporter/ATPase, N-terminus APS46_RS18910 PF00689 Cation transporting ATPase, C-terminus APS46_RS18915 PF02308 MgtC family APS46_RS18920 PF00892 EamA-like transporter family APS46_RS18925 PF04754 Putative transposase, YhgA-like APS46_RS18930 PF07071 KDGP aldolase APS46_RS18935 PF03841 L-seryl-tRNA selenium transferase APS46_RS18940 PF03613 PTS system mannose/fructose/sorbose family IID component APS46_RS18945 PF03609 PTS system sorbose-specific iic component APS46_RS18950 PF03610 PTS system fructose IIA component APS46_RS18950 PF03830 PTS system sorbose subfamily IIB component APS46_RS18960 PF00158 Sigma-54 interaction domain APS46_RS18960 PF00874 PRD domain APS46_RS18970 PF00232 Glycosyl hydrolase family 1 APS46_RS18975 PF07690 Major Facilitator Superfamily APS46_RS18995 PF01116 Fructose-bisphosphate aldolase class-II APS46_RS19005 PF03611 PTS system sugar-specific permease component APS46_RS19010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS19015 PF08279 HTH domain APS46_RS19015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS19015 PF00874 PRD domain APS46_RS19015 PF05043 Mga helix-turn-helix domain APS46_RS19020 PF00392 Bacterial regulatory proteins, gntR family APS46_RS19020 PF07702 UTRA domain APS46_RS19025 PF06711 Protein of unknown function (DUF1198) APS46_RS19030 PF07690 Major Facilitator Superfamily APS46_RS19035 PF07690 Major Facilitator Superfamily APS46_RS19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS19040 PF07730 Histidine kinase APS46_RS19040 PF05231 MASE1 APS46_RS19045 PF00072 Response regulator receiver domain APS46_RS19045 PF00196 Bacterial regulatory proteins, luxR family APS46_RS19055 PF07690 Major Facilitator Superfamily APS46_RS19060 PF00294 pfkB family carbohydrate kinase APS46_RS19065 PF00455 DeoR C terminal sensor domain APS46_RS19065 PF08220 DeoR-like helix-turn-helix domain APS46_RS19070 PF01842 ACT domain APS46_RS19075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS46_RS19075 PF00205 Thiamine pyrophosphate enzyme, central domain APS46_RS19075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS46_RS19080 PF08049 IlvB leader peptide APS46_RS19085 PF13939 Toxin TisB, type I toxin-antitoxin system APS46_RS19095 PF07690 Major Facilitator Superfamily APS46_RS19110 PF02447 GntP family permease APS46_RS19115 PF00291 Pyridoxal-phosphate dependent enzyme APS46_RS19125 PF02656 Domain of unknown function (DUF202) APS46_RS19130 PF02656 Domain of unknown function (DUF202) APS46_RS19135 PF06826 Predicted Permease Membrane Region APS46_RS19135 PF02080 TrkA-C domain APS46_RS19140 PF00011 Hsp20/alpha crystallin family APS46_RS19145 PF00011 Hsp20/alpha crystallin family APS46_RS19150 PF07119 Protein of unknown function (DUF1375) APS46_RS19155 PF07676 WD40-like Beta Propeller Repeat APS46_RS19155 PF12566 Protein of unknown function (DUF3748) APS46_RS19160 PF03918 Cytochrome C biogenesis protein APS46_RS19165 PF08534 Redoxin APS46_RS19170 PF01578 Cytochrome C assembly protein APS46_RS19170 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal APS46_RS19175 PF03100 CcmE APS46_RS19180 PF04995 Heme exporter protein D (CcmD) APS46_RS19185 PF01578 Cytochrome C assembly protein APS46_RS19190 PF03379 CcmB protein APS46_RS19195 PF00005 ABC transporter APS46_RS19200 PF00034 Cytochrome c APS46_RS19200 PF03150 Di-haem cytochrome c peroxidase APS46_RS19200 PF14376 Haem-binding domain APS46_RS19205 PF02613 Nitrate reductase delta subunit APS46_RS19210 PF00384 Molybdopterin oxidoreductase APS46_RS19210 PF18364 Molybdopterin oxidoreductase N-terminal domain APS46_RS19210 PF01568 Molydopterin dinucleotide binding domain APS46_RS19215 PF03264 NapC/NirT cytochrome c family, N-terminal region APS46_RS19220 PF00486 Transcriptional regulatory protein, C terminal APS46_RS19220 PF00072 Response regulator receiver domain APS46_RS19225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APS46_RS19230 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS19230 PF01627 Hpt domain APS46_RS19230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS19230 PF00072 Response regulator receiver domain APS46_RS19230 PF00672 HAMP domain APS46_RS19235 PF07690 Major Facilitator Superfamily APS46_RS19240 PF13378 Enolase C-terminal domain-like APS46_RS19240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS46_RS19245 PF01081 KDPG and KHG aldolase APS46_RS19250 PF05035 2-keto-3-deoxy-galactonokinase APS46_RS19255 PF00392 Bacterial regulatory proteins, gntR family APS46_RS19255 PF07729 FCD domain APS46_RS19265 PF07690 Major Facilitator Superfamily APS46_RS19270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS46_RS19270 PF13378 Enolase C-terminal domain-like APS46_RS19275 PF03466 LysR substrate binding domain APS46_RS19275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS19280 PF01751 Toprim domain APS46_RS19280 PF00986 DNA gyrase B subunit, carboxyl terminus APS46_RS19280 PF00204 DNA gyrase B APS46_RS19280 PF18053 DNA gyrase B subunit insert domain APS46_RS19280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS19285 PF02463 RecF/RecN/SMC N terminal domain APS46_RS19290 PF02768 DNA polymerase III beta subunit, C-terminal domain APS46_RS19290 PF02767 DNA polymerase III beta subunit, central domain APS46_RS19290 PF00712 DNA polymerase III beta subunit, N-terminal domain APS46_RS19295 PF08299 Bacterial dnaA protein helix-turn-helix APS46_RS19295 PF11638 DnaA N-terminal domain APS46_RS19295 PF00308 Bacterial dnaA protein APS46_RS19300 PF00468 Ribosomal protein L34 APS46_RS19305 PF00825 Ribonuclease P APS46_RS19310 PF01809 Putative membrane protein insertion efficiency factor APS46_RS19315 PF14849 YidC periplasmic domain APS46_RS19315 PF02096 60Kd inner membrane protein APS46_RS19320 PF01926 50S ribosome-binding GTPase APS46_RS19320 PF12631 MnmE helical domain APS46_RS19320 PF10396 GTP-binding protein TrmE N-terminus APS46_RS19325 PF07690 Major Facilitator Superfamily APS46_RS19330 PF03466 LysR substrate binding domain APS46_RS19330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS19340 PF03358 NADPH-dependent FMN reductase APS46_RS19345 PF00860 Permease family APS46_RS19350 PF13419 Haloacid dehalogenase-like hydrolase APS46_RS19355 PF01895 PhoU domain APS46_RS19360 PF00005 ABC transporter APS46_RS19365 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS19370 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS19375 PF12849 PBP superfamily domain APS46_RS19380 PF02378 Phosphotransferase system, EIIC APS46_RS19380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS19385 PF08501 Shikimate dehydrogenase substrate binding domain APS46_RS19390 PF12793 Sugar transport-related sRNA regulator N-term APS46_RS19390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS46_RS19395 PF01380 SIS domain APS46_RS19400 PF00132 Bacterial transferase hexapeptide (six repeats) APS46_RS19400 PF12804 MobA-like NTP transferase domain APS46_RS19410 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain APS46_RS19410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APS46_RS19415 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS46_RS19415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS46_RS19420 PF00231 ATP synthase APS46_RS19425 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS46_RS19425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS46_RS19425 PF00306 ATP synthase alpha/beta chain, C terminal domain APS46_RS19430 PF00213 ATP synthase delta (OSCP) subunit APS46_RS19435 PF00430 ATP synthase B/B' CF(0) APS46_RS19440 PF00137 ATP synthase subunit C APS46_RS19445 PF00119 ATP synthase A chain APS46_RS19450 PF03899 ATP synthase I chain APS46_RS19455 PF02527 rRNA small subunit methyltransferase G APS46_RS19460 PF01134 Glucose inhibited division protein A APS46_RS19460 PF13932 GidA associated domain APS46_RS19465 PF00258 Flavodoxin APS46_RS19470 PF01037 Lrp/AsnC ligand binding domain APS46_RS19475 PF03590 Aspartate-ammonia ligase APS46_RS19480 PF05762 VWA domain containing CoxE-like protein APS46_RS19485 PF12592 Protein of unknown function (DUF3763) APS46_RS19485 PF17868 AAA lid domain APS46_RS19485 PF07728 AAA domain (dynein-related subfamily) APS46_RS19490 PF02705 K+ potassium transporter APS46_RS19495 PF05025 RbsD / FucU transport protein family APS46_RS19500 PF00005 ABC transporter APS46_RS19505 PF02653 Branched-chain amino acid transport system / permease component APS46_RS19510 PF13407 Periplasmic binding protein domain APS46_RS19515 PF00294 pfkB family carbohydrate kinase APS46_RS19520 PF00356 Bacterial regulatory proteins, lacI family APS46_RS19525 PF07690 Major Facilitator Superfamily APS46_RS19530 PF07729 FCD domain APS46_RS19530 PF00392 Bacterial regulatory proteins, gntR family APS46_RS19565 PF03466 LysR substrate binding domain APS46_RS19565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS19570 PF04219 Protein of unknown function, DUF APS46_RS19575 PF01078 Magnesium chelatase, subunit ChlI APS46_RS19575 PF13335 Magnesium chelatase, subunit ChlI C-terminal APS46_RS19580 PF08046 IlvGEDA operon leader peptide APS46_RS19585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS46_RS19585 PF00205 Thiamine pyrophosphate enzyme, central domain APS46_RS19585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS46_RS19595 PF01063 Amino-transferase class IV APS46_RS19600 PF00920 Dehydratase family APS46_RS19605 PF00291 Pyridoxal-phosphate dependent enzyme APS46_RS19605 PF00585 C-terminal regulatory domain of Threonine dehydratase APS46_RS19620 PF03466 LysR substrate binding domain APS46_RS19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS19625 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain APS46_RS19625 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain APS46_RS19640 PF00580 UvrD/REP helicase N-terminal domain APS46_RS19640 PF13361 UvrD-like helicase C-terminal domain APS46_RS19645 PF02541 Ppx/GppA phosphatase family APS46_RS19650 PF00270 DEAD/DEAH box helicase APS46_RS19650 PF00271 Helicase conserved C-terminal domain APS46_RS19655 PF00085 Thioredoxin APS46_RS19660 PF07497 Rho termination factor, RNA-binding domain APS46_RS19660 PF07498 Rho termination factor, N-terminal domain APS46_RS19660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS46_RS19665 PF00953 Glycosyl transferase family 4 APS46_RS19670 PF02706 Chain length determinant protein APS46_RS19675 PF02350 UDP-N-acetylglucosamine 2-epimerase APS46_RS19680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APS46_RS19680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APS46_RS19680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APS46_RS19685 PF16363 GDP-mannose 4,6 dehydratase APS46_RS19690 PF00483 Nucleotidyl transferase APS46_RS19690 PF00483 Nucleotidyl transferase APS46_RS19700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APS46_RS19705 PF01943 Polysaccharide biosynthesis protein APS46_RS19710 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 APS46_RS19715 PF06899 WzyE protein, O-antigen assembly polymerase APS46_RS19720 PF03808 Glycosyl transferase WecB/TagA/CpsF family APS46_RS19725 PF00324 Amino acid permease APS46_RS19750 PF07219 HemY protein N-terminus APS46_RS19750 PF07719 Tetratricopeptide repeat APS46_RS19755 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase APS46_RS19760 PF02602 Uroporphyrinogen-III synthase HemD APS46_RS19765 PF03900 Porphobilinogen deaminase, C-terminal domain APS46_RS19765 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain APS46_RS19770 PF01295 Adenylate cyclase, class-I APS46_RS19770 PF12633 Adenylate cyclase NT domain APS46_RS19775 PF01491 Frataxin-like domain APS46_RS19785 PF13627 Prokaryotic lipoprotein-attachment site APS46_RS19790 PF01678 Diaminopimelate epimerase APS46_RS19795 PF04340 Protein of unknown function, DUF484 APS46_RS19800 PF00589 Phage integrase family APS46_RS19800 PF02899 Phage integrase, N-terminal SAM-like domain APS46_RS19805 PF13419 Haloacid dehalogenase-like hydrolase APS46_RS19810 PF13361 UvrD-like helicase C-terminal domain APS46_RS19810 PF00580 UvrD/REP helicase N-terminal domain APS46_RS19815 PF01544 CorA-like Mg2+ transporter protein APS46_RS19830 PF00892 EamA-like transporter family APS46_RS19835 PF03061 Thioesterase superfamily APS46_RS19840 PF02253 Phospholipase A1 APS46_RS19845 PF09382 RQC domain APS46_RS19845 PF16124 RecQ zinc-binding APS46_RS19845 PF00271 Helicase conserved C-terminal domain APS46_RS19845 PF00270 DEAD/DEAH box helicase APS46_RS19845 PF00570 HRDC domain APS46_RS19850 PF01810 LysE type translocator APS46_RS19855 PF01810 LysE type translocator APS46_RS19860 PF12146 Serine aminopeptidase, S33 APS46_RS19870 PF00892 EamA-like transporter family APS46_RS19875 PF03466 LysR substrate binding domain APS46_RS19875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS19880 PF08267 Cobalamin-independent synthase, N-terminal domain APS46_RS19880 PF01717 Cobalamin-independent synthase, Catalytic domain APS46_RS19885 PF04055 Radical SAM superfamily APS46_RS19885 PF13186 Iron-sulfur cluster-binding domain APS46_RS19890 PF01738 Dienelactone hydrolase family APS46_RS19895 PF01048 Phosphorylase superfamily APS46_RS19900 PF02646 RmuC family APS46_RS19905 PF01209 ubiE/COQ5 methyltransferase family APS46_RS19910 PF02036 SCP-2 sterol transfer family APS46_RS19915 PF03109 ABC1 family APS46_RS19920 PF02416 mttA/Hcf106 family APS46_RS19930 PF00902 Sec-independent protein translocase protein (TatC) APS46_RS19935 PF01026 TatD related DNase APS46_RS19940 PF02357 Transcription termination factor nusG APS46_RS19945 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase APS46_RS19950 PF00970 Oxidoreductase FAD-binding domain APS46_RS19950 PF00175 Oxidoreductase NAD-binding domain APS46_RS19955 PF05935 Arylsulfotransferase (ASST) APS46_RS19955 PF17425 Arylsulfotransferase Ig-like domain APS46_RS19960 PF00108 Thiolase, N-terminal domain APS46_RS19960 PF02803 Thiolase, C-terminal domain APS46_RS19965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APS46_RS19965 PF00378 Enoyl-CoA hydratase/isomerase APS46_RS19965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APS46_RS19970 PF00557 Metallopeptidase family M24 APS46_RS19975 PF01205 Uncharacterized protein family UPF0029 APS46_RS19975 PF09186 Domain of unknown function (DUF1949) APS46_RS19980 PF02386 Cation transport protein APS46_RS19985 PF12724 Flavodoxin domain APS46_RS20020 PF03205 Molybdopterin guanine dinucleotide synthesis protein B APS46_RS20025 PF12804 MobA-like NTP transferase domain APS46_RS20030 PF06288 Protein of unknown function (DUF1040) APS46_RS20035 PF01636 Phosphotransferase enzyme family APS46_RS20040 PF01323 DSBA-like thioredoxin domain APS46_RS20045 PF01553 Acyltransferase APS46_RS20055 PF00476 DNA polymerase family A APS46_RS20055 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APS46_RS20055 PF01612 3'-5' exonuclease APS46_RS20055 PF01367 5'-3' exonuclease, C-terminal SAM fold APS46_RS20060 PF01926 50S ribosome-binding GTPase APS46_RS20070 PF04220 Der GTPase activator (YihI) APS46_RS20075 PF06969 HemN C-terminal domain APS46_RS20075 PF04055 Radical SAM superfamily APS46_RS20080 PF02954 Bacterial regulatory protein, Fis family APS46_RS20080 PF00072 Response regulator receiver domain APS46_RS20080 PF00158 Sigma-54 interaction domain APS46_RS20085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS20085 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS20085 PF00989 PAS fold APS46_RS20090 PF00120 Glutamine synthetase, catalytic domain APS46_RS20090 PF03951 Glutamine synthetase, beta-Grasp domain APS46_RS20095 PF03144 Elongation factor Tu domain 2 APS46_RS20095 PF00009 Elongation factor Tu GTP binding domain APS46_RS20095 PF00679 Elongation factor G C-terminus APS46_RS20105 PF06178 Oligogalacturonate-specific porin protein (KdgM) APS46_RS20120 PF01055 Glycosyl hydrolases family 31 APS46_RS20130 PF01263 Aldose 1-epimerase APS46_RS20140 PF01791 DeoC/LacD family aldolase APS46_RS20145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS46_RS20145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APS46_RS20150 PF00294 pfkB family carbohydrate kinase APS46_RS20155 PF08220 DeoR-like helix-turn-helix domain APS46_RS20155 PF00455 DeoR C terminal sensor domain APS46_RS20160 PF13419 Haloacid dehalogenase-like hydrolase APS46_RS20165 PF03631 Virulence factor BrkB APS46_RS20170 PF02580 D-Tyr-tRNA(Tyr) deacylase APS46_RS20175 PF00583 Acetyltransferase (GNAT) family APS46_RS20175 PF09500 Putative thioesterase (yiiD_Cterm) APS46_RS20180 PF01381 Helix-turn-helix APS46_RS20185 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system APS46_RS20190 PF07859 alpha/beta hydrolase fold APS46_RS20195 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system APS46_RS20205 PF04216 Protein involved in formate dehydrogenase formation APS46_RS20210 PF01292 Prokaryotic cytochrome b561 APS46_RS20215 PF13247 4Fe-4S dicluster domain APS46_RS20215 PF09163 Formate dehydrogenase N, transmembrane APS46_RS20220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS20220 PF01568 Molydopterin dinucleotide binding domain APS46_RS20220 PF00384 Molybdopterin oxidoreductase APS46_RS20225 PF01568 Molydopterin dinucleotide binding domain APS46_RS20225 PF00384 Molybdopterin oxidoreductase APS46_RS20225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS20230 PF02634 FdhD/NarQ family APS46_RS20235 PF12889 Protein of unknown function (DUF3829) APS46_RS20240 PF12889 Protein of unknown function (DUF3829) APS46_RS20250 PF03591 AzlC protein APS46_RS20260 PF05336 L-rhamnose mutarotase APS46_RS20265 PF00465 Iron-containing alcohol dehydrogenase APS46_RS20270 PF00596 Class II Aldolase and Adducin N-terminal domain APS46_RS20275 PF06134 L-rhamnose isomerase (RhaA) APS46_RS20280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS46_RS20280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS46_RS20285 PF12833 Helix-turn-helix domain APS46_RS20285 PF02311 AraC-like ligand binding domain APS46_RS20290 PF02311 AraC-like ligand binding domain APS46_RS20290 PF12833 Helix-turn-helix domain APS46_RS20295 PF06379 L-rhamnose-proton symport protein (RhaT) APS46_RS20305 PF06178 Oligogalacturonate-specific porin protein (KdgM) APS46_RS20310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS46_RS20315 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component APS46_RS20320 PF03480 Bacterial extracellular solute-binding protein, family 7 APS46_RS20325 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APS46_RS20325 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APS46_RS20330 PF03473 MOSC domain APS46_RS20330 PF03475 3-alpha domain APS46_RS20345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS20345 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS20345 PF16527 Two-component sensor protein CpxA, periplasmic domain APS46_RS20345 PF00672 HAMP domain APS46_RS20350 PF00486 Transcriptional regulatory protein, C terminal APS46_RS20350 PF00072 Response regulator receiver domain APS46_RS20355 PF07813 LTXXQ motif family protein APS46_RS20360 PF01545 Cation efflux family APS46_RS20360 PF16916 Dimerisation domain of Zinc Transporter APS46_RS20365 PF00365 Phosphofructokinase APS46_RS20375 PF02611 CDP-diacylglycerol pyrophosphatase APS46_RS20385 PF00294 pfkB family carbohydrate kinase APS46_RS20395 PF00155 Aminotransferase class I and II APS46_RS20395 PF00392 Bacterial regulatory proteins, gntR family APS46_RS20410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS46_RS20410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS46_RS20415 PF04198 Putative sugar-binding domain APS46_RS20420 PF00005 ABC transporter APS46_RS20425 PF02653 Branched-chain amino acid transport system / permease component APS46_RS20430 PF02653 Branched-chain amino acid transport system / permease component APS46_RS20435 PF13407 Periplasmic binding protein domain APS46_RS20440 PF01791 DeoC/LacD family aldolase APS46_RS20445 PF03992 Antibiotic biosynthesis monooxygenase APS46_RS20450 PF00834 Ribulose-phosphate 3 epimerase family APS46_RS20455 PF00121 Triosephosphate isomerase APS46_RS20460 PF07305 Protein of unknown function (DUF1454) APS46_RS20465 PF05656 Protein of unknown function (DUF805) APS46_RS20470 PF00175 Oxidoreductase NAD-binding domain APS46_RS20470 PF00970 Oxidoreductase FAD-binding domain APS46_RS20475 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded APS46_RS20480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS46_RS20480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS46_RS20485 PF00230 Major intrinsic protein APS46_RS20490 PF06005 Cell division protein ZapB APS46_RS20495 PF03737 Aldolase/RraA APS46_RS20500 PF01040 UbiA prenyltransferase family APS46_RS20505 PF00004 ATPase family associated with various cellular activities (AAA) APS46_RS20505 PF07724 AAA domain (Cdc48 subfamily) APS46_RS20505 PF10431 C-terminal, D2-small domain, of ClpB protein APS46_RS20510 PF00227 Proteasome subunit APS46_RS20515 PF05036 Sporulation related domain APS46_RS20520 PF00356 Bacterial regulatory proteins, lacI family APS46_RS20525 PF18319 PriA DNA helicase Cys-rich region (CRR) domain APS46_RS20525 PF00270 DEAD/DEAH box helicase APS46_RS20525 PF17764 3′ DNA-binding domain (3′BD) APS46_RS20525 PF18074 Primosomal protein N C-terminal domain APS46_RS20525 PF00271 Helicase conserved C-terminal domain APS46_RS20530 PF01197 Ribosomal protein L31 APS46_RS20540 PF17425 Arylsulfotransferase Ig-like domain APS46_RS20540 PF05935 Arylsulfotransferase (ASST) APS46_RS20545 PF01340 Met Apo-repressor, MetJ APS46_RS20550 PF01053 Cys/Met metabolism PLP-dependent enzyme APS46_RS20555 PF03447 Homoserine dehydrogenase, NAD binding domain APS46_RS20555 PF00696 Amino acid kinase family APS46_RS20555 PF00742 Homoserine dehydrogenase APS46_RS20560 PF00924 Mechanosensitive ion channel APS46_RS20560 PF05552 Conserved TM helix APS46_RS20575 PF17936 Bacterial Ig domain APS46_RS20575 PF00149 Calcineurin-like phosphoesterase APS46_RS20575 PF02872 5'-nucleotidase, C-terminal domain APS46_RS20580 PF02219 Methylenetetrahydrofolate reductase APS46_RS20585 PF00141 Peroxidase APS46_RS20590 PF06940 Domain of unknown function (DUF1287) APS46_RS20595 PF00465 Iron-containing alcohol dehydrogenase APS46_RS20600 PF00923 Transaldolase/Fructose-6-phosphate aldolase APS46_RS20605 PF12833 Helix-turn-helix domain APS46_RS20610 PF00884 Sulfatase APS46_RS20615 PF00311 Phosphoenolpyruvate carboxylase APS46_RS20620 PF07687 Peptidase dimerisation domain APS46_RS20620 PF01546 Peptidase family M20/M25/M40 APS46_RS20625 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS46_RS20625 PF02774 Semialdehyde dehydrogenase, dimerisation domain APS46_RS20630 PF00696 Amino acid kinase family APS46_RS20635 PF14698 Argininosuccinate lyase C-terminal APS46_RS20635 PF00206 Lyase APS46_RS20640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS20640 PF03466 LysR substrate binding domain APS46_RS20645 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS46_RS20645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS46_RS20650 PF00440 Bacterial regulatory proteins, tetR family APS46_RS20655 PF07226 Protein of unknown function (DUF1422) APS46_RS20660 PF05958 tRNA (Uracil-5-)-methyltransferase APS46_RS20665 PF07715 TonB-dependent Receptor Plug Domain APS46_RS20665 PF00593 TonB dependent receptor APS46_RS20670 PF01177 Asp/Glu/Hydantoin racemase APS46_RS20700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APS46_RS20700 PF01565 FAD binding domain APS46_RS20705 PF08279 HTH domain APS46_RS20705 PF03099 Biotin/lipoate A/B protein ligase family APS46_RS20705 PF02237 Biotin protein ligase C terminal domain APS46_RS20710 PF00485 Phosphoribulokinase / Uridine kinase family APS46_RS20740 PF03143 Elongation factor Tu C-terminal domain APS46_RS20740 PF03144 Elongation factor Tu domain 2 APS46_RS20740 PF00009 Elongation factor Tu GTP binding domain APS46_RS20745 PF00584 SecE/Sec61-gamma subunits of protein translocation complex APS46_RS20750 PF02357 Transcription termination factor nusG APS46_RS20750 PF00467 KOW motif APS46_RS20755 PF03946 Ribosomal protein L11, N-terminal domain APS46_RS20755 PF00298 Ribosomal protein L11, RNA binding domain APS46_RS20760 PF00687 Ribosomal protein L1p/L10e family APS46_RS20765 PF00466 Ribosomal protein L10 APS46_RS20770 PF16320 Ribosomal protein L7/L12 dimerisation domain APS46_RS20770 PF00542 Ribosomal protein L7/L12 C-terminal domain APS46_RS20775 PF04561 RNA polymerase Rpb2, domain 2 APS46_RS20775 PF04565 RNA polymerase Rpb2, domain 3 APS46_RS20775 PF10385 RNA polymerase beta subunit external 1 domain APS46_RS20775 PF00562 RNA polymerase Rpb2, domain 6 APS46_RS20775 PF04560 RNA polymerase Rpb2, domain 7 APS46_RS20775 PF04563 RNA polymerase beta subunit APS46_RS20780 PF04983 RNA polymerase Rpb1, domain 3 APS46_RS20780 PF04998 RNA polymerase Rpb1, domain 5 APS46_RS20780 PF05000 RNA polymerase Rpb1, domain 4 APS46_RS20780 PF00623 RNA polymerase Rpb1, domain 2 APS46_RS20780 PF04997 RNA polymerase Rpb1, domain 1 APS46_RS20800 PF04055 Radical SAM superfamily APS46_RS20800 PF06968 Biotin and Thiamin Synthesis associated domain APS46_RS20805 PF05690 Thiazole biosynthesis protein ThiG APS46_RS20810 PF02597 ThiS family APS46_RS20815 PF00899 ThiF family APS46_RS20820 PF02581 Thiamine monophosphate synthase APS46_RS20825 PF01964 Radical SAM ThiC family APS46_RS20825 PF13667 ThiC-associated domain APS46_RS20830 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ APS46_RS20835 PF00293 NUDIX domain APS46_RS20835 PF09297 NADH pyrophosphatase zinc ribbon domain APS46_RS20840 PF01208 Uroporphyrinogen decarboxylase (URO-D) APS46_RS20845 PF04493 Endonuclease V APS46_RS20850 PF04222 Protein of unknown function (DUF416) APS46_RS20855 PF00216 Bacterial DNA-binding protein APS46_RS20860 PF07356 Protein of unknown function (DUF1481) APS46_RS20865 PF13801 Heavy-metal resistance APS46_RS20870 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS20870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS20875 PF00158 Sigma-54 interaction domain APS46_RS20875 PF02954 Bacterial regulatory protein, Fis family APS46_RS20875 PF00072 Response regulator receiver domain APS46_RS20880 PF02844 Phosphoribosylglycinamide synthetase, N domain APS46_RS20880 PF02843 Phosphoribosylglycinamide synthetase, C domain APS46_RS20880 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APS46_RS20885 PF01808 AICARFT/IMPCHase bienzyme APS46_RS20885 PF02142 MGS-like domain APS46_RS20910 PF13673 Acetyltransferase (GNAT) domain APS46_RS20915 PF04204 Homoserine O-succinyltransferase APS46_RS20920 PF01274 Malate synthase APS46_RS20925 PF00463 Isocitrate lyase family APS46_RS20930 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) APS46_RS20940 PF01614 Bacterial transcriptional regulator APS46_RS20940 PF09339 IclR helix-turn-helix domain APS46_RS20945 PF00809 Pterin binding enzyme APS46_RS20945 PF02574 Homocysteine S-methyltransferase APS46_RS20945 PF02607 B12 binding domain APS46_RS20945 PF02965 Vitamin B12 dependent methionine synthase, activation domain APS46_RS20945 PF02310 B12 binding domain APS46_RS20950 PF02690 Na+/Pi-cotransporter APS46_RS20955 PF03575 Peptidase family S51 APS46_RS20965 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) APS46_RS20970 PF01479 S4 domain APS46_RS20970 PF00849 RNA pseudouridylate synthase APS46_RS20975 PF11656 YjbD family (DUF3811) APS46_RS20980 PF01758 Sodium Bile acid symporter family APS46_RS21010 PF03335 Phage tail fibre repeat APS46_RS21010 PF07484 Phage Tail Collar Domain APS46_RS21010 PF08400 Prophage tail fibre N-terminal APS46_RS21035 PF00535 Glycosyl transferase family 2 APS46_RS21040 PF04138 GtrA-like protein APS46_RS21110 PF08765 Mor transcription activator family APS46_RS21115 PF00696 Amino acid kinase family APS46_RS21115 PF01842 ACT domain APS46_RS21120 PF00342 Phosphoglucose isomerase APS46_RS21130 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF APS46_RS21135 PF06251 Capsule biosynthesis GfcC APS46_RS21140 PF06082 Exopolysaccharide biosynthesis protein YbjH APS46_RS21145 PF06146 Phosphate-starvation-inducible E APS46_RS21150 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS21155 PF14785 Maltose transport system permease protein MalF P2 domain APS46_RS21155 PF00528 Binding-protein-dependent transport system inner membrane component APS46_RS21160 PF01547 Bacterial extracellular solute-binding protein APS46_RS21165 PF17912 MalK OB fold domain APS46_RS21165 PF00005 ABC transporter APS46_RS21170 PF02264 LamB porin APS46_RS21175 PF07148 Maltose operon periplasmic protein precursor (MalM) APS46_RS21180 PF04345 Chorismate lyase APS46_RS21185 PF01040 UbiA prenyltransferase family APS46_RS21190 PF01553 Acyltransferase APS46_RS21195 PF01219 Prokaryotic diacylglycerol kinase APS46_RS21200 PF00717 Peptidase S24-like APS46_RS21200 PF01726 LexA DNA binding domain APS46_RS21205 PF01554 MatE APS46_RS21215 PF05532 CsbD-like APS46_RS21220 PF01475 Ferric uptake regulator family APS46_RS21230 PF01207 Dihydrouridine synthase (Dus) APS46_RS21235 PF09583 Phage shock protein G (Phageshock_PspG) APS46_RS21240 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS21240 PF00107 Zinc-binding dehydrogenase APS46_RS21245 PF03796 DnaB-like helicase C terminal domain APS46_RS21245 PF00772 DnaB-like helicase N terminal domain APS46_RS21250 PF00842 Alanine racemase, C-terminal domain APS46_RS21250 PF01168 Alanine racemase, N-terminal domain APS46_RS21255 PF00155 Aminotransferase class I and II APS46_RS21260 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) APS46_RS21265 PF01894 Uncharacterised protein family UPF0047 APS46_RS21270 PF04237 YjbR APS46_RS21285 PF00005 ABC transporter APS46_RS21285 PF17755 UvrA DNA-binding domain APS46_RS21285 PF17760 UvrA interaction domain APS46_RS21295 PF00436 Single-strand binding protein family APS46_RS21325 PF00664 ABC transporter transmembrane region APS46_RS21325 PF00005 ABC transporter APS46_RS21330 PF15940 Family of unknown function APS46_RS21335 PF00563 EAL domain APS46_RS21335 PF12792 CSS motif domain associated with EAL APS46_RS21340 PF12833 Helix-turn-helix domain APS46_RS21345 PF00376 MerR family regulatory protein APS46_RS21345 PF09278 MerR, DNA binding APS46_RS21355 PF00860 Permease family APS46_RS21360 PF00999 Sodium/hydrogen exchanger family APS46_RS21365 PF03466 LysR substrate binding domain APS46_RS21365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS21370 PF03788 LrgA family APS46_RS21375 PF04172 LrgB-like family APS46_RS21380 PF00474 Sodium:solute symporter family APS46_RS21385 PF04341 Protein of unknown function, DUF485 APS46_RS21390 PF16177 Acetyl-coenzyme A synthetase N-terminus APS46_RS21390 PF13193 AMP-binding enzyme C-terminal domain APS46_RS21390 PF00501 AMP-binding enzyme APS46_RS21400 PF02335 Cytochrome c552 APS46_RS21405 PF13435 Cytochrome c554 and c-prime APS46_RS21405 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) APS46_RS21410 PF13247 4Fe-4S dicluster domain APS46_RS21410 PF00037 4Fe-4S binding domain APS46_RS21415 PF03916 Polysulphide reductase, NrfD APS46_RS21420 PF01578 Cytochrome C assembly protein APS46_RS21420 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal APS46_RS21425 PF03918 Cytochrome C biogenesis protein APS46_RS21435 PF00375 Sodium:dicarboxylate symporter family APS46_RS21440 PF08238 Sel1 repeat APS46_RS21445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS21445 PF01568 Molydopterin dinucleotide binding domain APS46_RS21445 PF00384 Molybdopterin oxidoreductase APS46_RS21450 PF01568 Molydopterin dinucleotide binding domain APS46_RS21450 PF00384 Molybdopterin oxidoreductase APS46_RS21450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS21460 PF00583 Acetyltransferase (GNAT) family APS46_RS21465 PF06983 3-demethylubiquinone-9 3-methyltransferase APS46_RS21470 PF08274 PhnA Zinc-Ribbon APS46_RS21470 PF03831 PhnA domain APS46_RS21475 PF08946 Osmosensory transporter coiled coil APS46_RS21475 PF00083 Sugar (and other) transporter APS46_RS21480 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS21480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS21485 PF00072 Response regulator receiver domain APS46_RS21485 PF00486 Transcriptional regulatory protein, C terminal APS46_RS21490 PF08019 Phosphoethanolamine transferase EptA/EptB APS46_RS21490 PF00884 Sulfatase APS46_RS21495 PF13520 Amino acid permease APS46_RS21500 PF12833 Helix-turn-helix domain APS46_RS21510 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain APS46_RS21510 PF01276 Orn/Lys/Arg decarboxylase, major domain APS46_RS21510 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain APS46_RS21515 PF12833 Helix-turn-helix domain APS46_RS21520 PF11975 Family 4 glycosyl hydrolase C-terminal domain APS46_RS21520 PF02056 Family 4 glycosyl hydrolase APS46_RS21530 PF05681 Fumarate hydratase (Fumerase) APS46_RS21530 PF05683 Fumarase C-terminus APS46_RS21535 PF03605 Anaerobic c4-dicarboxylate membrane transporter APS46_RS21545 PF00072 Response regulator receiver domain APS46_RS21550 PF00989 PAS fold APS46_RS21550 PF17203 Single cache domain 3 APS46_RS21550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS21550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain APS46_RS21555 PF00384 Molybdopterin oxidoreductase APS46_RS21555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS46_RS21555 PF01568 Molydopterin dinucleotide binding domain APS46_RS21560 PF13247 4Fe-4S dicluster domain APS46_RS21560 PF12800 4Fe-4S binding domain APS46_RS21565 PF04976 DMSO reductase anchor subunit (DmsC) APS46_RS21570 PF02613 Nitrate reductase delta subunit APS46_RS21580 PF06977 SdiA-regulated APS46_RS21585 PF00005 ABC transporter APS46_RS21590 PF00196 Bacterial regulatory proteins, luxR family APS46_RS21590 PF00072 Response regulator receiver domain APS46_RS21595 PF12833 Helix-turn-helix domain APS46_RS21610 PF00665 Integrase core domain APS46_RS21610 PF13333 Integrase core domain APS46_RS21610 PF13276 HTH-like domain APS46_RS21625 PF00872 Transposase, Mutator family APS46_RS21630 PF00872 Transposase, Mutator family APS46_RS21635 PF01569 PAP2 superfamily APS46_RS21650 PF02683 Cytochrome C biogenesis protein transmembrane region APS46_RS21650 PF11412 Disulphide bond corrector protein DsbC APS46_RS21655 PF03091 CutA1 divalent ion tolerance protein APS46_RS21660 PF03605 Anaerobic c4-dicarboxylate membrane transporter APS46_RS21665 PF10415 Fumarase C C-terminus APS46_RS21665 PF00206 Lyase APS46_RS21675 PF04186 FxsA cytoplasmic membrane protein APS46_RS21680 PF13520 Amino acid permease APS46_RS21685 PF00166 Chaperonin 10 Kd subunit APS46_RS21690 PF00118 TCP-1/cpn60 chaperonin family APS46_RS21695 PF13698 Domain of unknown function (DUF4156) APS46_RS21700 PF15922 YjeJ-like APS46_RS21705 PF04055 Radical SAM superfamily APS46_RS21710 PF09285 Elongation factor P, C-terminal APS46_RS21710 PF08207 Elongation factor P (EF-P) KOW-like domain APS46_RS21710 PF01132 Elongation factor P (EF-P) OB domain APS46_RS21715 PF08085 Entericidin EcnA/B family APS46_RS21720 PF08085 Entericidin EcnA/B family APS46_RS21725 PF00196 Bacterial regulatory proteins, luxR family APS46_RS21730 PF00893 Small Multidrug Resistance protein APS46_RS21735 PF08212 Lipocalin-like domain APS46_RS21740 PF02313 Fumarate reductase subunit D APS46_RS21745 PF02300 Fumarate reductase subunit C APS46_RS21750 PF13183 4Fe-4S dicluster domain APS46_RS21750 PF13085 2Fe-2S iron-sulfur cluster binding domain APS46_RS21755 PF02910 Fumarate reductase flavoprotein C-term APS46_RS21755 PF00890 FAD binding domain APS46_RS21760 PF00152 tRNA synthetases class II (D, K and N) APS46_RS21765 PF13520 Amino acid permease APS46_RS21775 PF00924 Mechanosensitive ion channel APS46_RS21775 PF12795 Mechanosensitive ion channel porin domain APS46_RS21775 PF12794 Mechanosensitive ion channel inner membrane domain 1 APS46_RS21780 PF02666 Phosphatidylserine decarboxylase APS46_RS21785 PF03193 RsgA GTPase APS46_RS21790 PF00929 Exonuclease APS46_RS21795 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS46_RS21815 PF08331 Domain of unknown function (DUF1730) APS46_RS21820 PF03853 YjeF-related protein N-terminus APS46_RS21820 PF01256 Carbohydrate kinase APS46_RS21825 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE APS46_RS21830 PF01520 N-acetylmuramoyl-L-alanine amidase APS46_RS21835 PF08676 MutL C terminal dimerisation domain APS46_RS21835 PF01119 DNA mismatch repair protein, C-terminal domain APS46_RS21845 PF17209 Hfq protein APS46_RS21850 PF01926 50S ribosome-binding GTPase APS46_RS21850 PF13167 GTP-binding GTPase N-terminal APS46_RS21850 PF16360 GTP-binding GTPase Middle Region APS46_RS21855 PF12221 Bacterial membrane protein N terminal APS46_RS21855 PF01145 SPFH domain / Band 7 family APS46_RS21860 PF01145 SPFH domain / Band 7 family APS46_RS21865 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) APS46_RS21870 PF00709 Adenylosuccinate synthetase APS46_RS21875 PF02082 Transcriptional regulator APS46_RS21880 PF00575 S1 RNA binding domain APS46_RS21880 PF00773 RNB domain APS46_RS21880 PF08206 Ribonuclease B OB domain APS46_RS21880 PF08461 Ribonuclease R winged-helix domain APS46_RS21880 PF17876 Cold shock domain APS46_RS21885 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS46_RS21885 PF00588 SpoU rRNA Methylase family APS46_RS21890 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) APS46_RS21895 PF04012 PspA/IM30 family APS46_RS21905 PF10679 Protein of unknown function (DUF2491) APS46_RS21910 PF03994 Domain of Unknown Function (DUF350) APS46_RS21915 PF06693 Protein of unknown function (DUF1190) APS46_RS21920 PF03738 Glutathionylspermidine synthase preATP-grasp APS46_RS21925 PF02770 Acyl-CoA dehydrogenase, middle domain APS46_RS21925 PF18158 Adaptive response protein AidB N-terminal domain APS46_RS21925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS46_RS21930 PF07338 Protein of unknown function (DUF1471) APS46_RS21935 PF07338 Protein of unknown function (DUF1471) APS46_RS21940 PF00326 Prolyl oligopeptidase family APS46_RS21945 PF00455 DeoR C terminal sensor domain APS46_RS21945 PF08220 DeoR-like helix-turn-helix domain APS46_RS21955 PF03611 PTS system sugar-specific permease component APS46_RS21960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APS46_RS21965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS21970 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APS46_RS21975 PF01261 Xylose isomerase-like TIM barrel APS46_RS21980 PF00596 Class II Aldolase and Adducin N-terminal domain APS46_RS21985 PF07338 Protein of unknown function (DUF1471) APS46_RS21995 PF01250 Ribosomal protein S6 APS46_RS22000 PF00436 Single-strand binding protein family APS46_RS22005 PF01084 Ribosomal protein S18 APS46_RS22010 PF01281 Ribosomal protein L9, N-terminal domain APS46_RS22010 PF03948 Ribosomal protein L9, C-terminal domain APS46_RS22020 PF08525 Opacity-associated protein A N-terminal motif APS46_RS22020 PF04225 Opacity-associated protein A LysM-like domain APS46_RS22025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS46_RS22025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APS46_RS22030 PF00324 Amino acid permease APS46_RS22035 PF01814 Hemerythrin HHE cation binding domain APS46_RS22035 PF04405 Domain of Unknown function (DUF542) APS46_RS22040 PF00892 EamA-like transporter family APS46_RS22045 PF05368 NmrA-like family APS46_RS22050 PF01638 HxlR-like helix-turn-helix APS46_RS22055 PF02872 5'-nucleotidase, C-terminal domain APS46_RS22055 PF00149 Calcineurin-like phosphoesterase APS46_RS22060 PF00459 Inositol monophosphatase family APS46_RS22065 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) APS46_RS22070 PF06526 Protein of unknown function (DUF1107) APS46_RS22075 PF03471 Transporter associated domain APS46_RS22075 PF00571 CBS domain APS46_RS22075 PF01595 Cyclin M transmembrane N-terminal domain APS46_RS22080 PF01625 Peptide methionine sulfoxide reductase APS46_RS22085 PF17243 POTRA domain TamA domain 1 APS46_RS22085 PF01103 Surface antigen APS46_RS22085 PF07244 Surface antigen variable number repeat APS46_RS22090 PF04357 TamB, inner membrane protein subunit of TAM complex APS46_RS22095 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like APS46_RS22100 PF07690 Major Facilitator Superfamily APS46_RS22105 PF01979 Amidohydrolase family APS46_RS22110 PF00719 Inorganic pyrophosphatase APS46_RS22115 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain APS46_RS22120 PF01225 Mur ligase family, catalytic domain APS46_RS22120 PF02875 Mur ligase family, glutamate ligase domain APS46_RS22120 PF08245 Mur ligase middle domain APS46_RS22125 PF04751 Protein of unknown function (DUF615) APS46_RS22130 PF01523 Putative modulator of DNA gyrase APS46_RS22135 PF07361 Cytochrome b562 APS46_RS22165 PF01979 Amidohydrolase family APS46_RS22170 PF03841 L-seryl-tRNA selenium transferase APS46_RS22175 PF07071 KDGP aldolase APS46_RS22180 PF05043 Mga helix-turn-helix domain APS46_RS22180 PF08279 HTH domain APS46_RS22180 PF00874 PRD domain APS46_RS22180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APS46_RS22185 PF04221 RelB antitoxin APS46_RS22190 PF05016 ParE toxin of type II toxin-antitoxin system, parDE APS46_RS22200 PF03477 ATP cone domain APS46_RS22200 PF13597 Anaerobic ribonucleoside-triphosphate reductase APS46_RS22210 PF11941 Domain of unknown function (DUF3459) APS46_RS22210 PF00128 Alpha amylase, catalytic domain APS46_RS22215 PF02378 Phosphotransferase system, EIIC APS46_RS22215 PF00367 phosphotransferase system, EIIB APS46_RS22220 PF00356 Bacterial regulatory proteins, lacI family APS46_RS22225 PF00690 Cation transporter/ATPase, N-terminus APS46_RS22225 PF00689 Cation transporting ATPase, C-terminus APS46_RS22235 PF01042 Endoribonuclease L-PSP APS46_RS22240 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain APS46_RS22240 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain APS46_RS22245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS46_RS22245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS46_RS22250 PF08052 PyrBI operon leader peptide APS46_RS22255 PF02863 Arginine repressor, C-terminal domain APS46_RS22255 PF01316 Arginine repressor, DNA binding domain APS46_RS22260 PF03606 C4-dicarboxylate anaerobic carrier APS46_RS22265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS46_RS22265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS46_RS22270 PF00696 Amino acid kinase family APS46_RS22280 PF04074 YhcH/YjgK/YiaL APS46_RS22285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS46_RS22285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS46_RS22290 PF06877 Regulator of ribonuclease activity B APS46_RS22295 PF01797 Transposase IS200 like APS46_RS22300 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) APS46_RS22305 PF12276 Protein of unknown function (DUF3617) APS46_RS22310 PF00583 Acetyltransferase (GNAT) family APS46_RS22315 PF05987 Bacterial protein of unknown function (DUF898) APS46_RS22320 PF08264 Anticodon-binding domain of tRNA APS46_RS22320 PF00133 tRNA synthetases class I (I, L, M and V) APS46_RS22320 PF10458 Valyl tRNA synthetase tRNA binding arm APS46_RS22325 PF04364 DNA polymerase III chi subunit, HolC APS46_RS22330 PF00883 Cytosol aminopeptidase family, catalytic domain APS46_RS22330 PF02789 Cytosol aminopeptidase family, N-terminal domain APS46_RS22340 PF03739 Lipopolysaccharide export system permease LptF/LptG APS46_RS22345 PF03739 Lipopolysaccharide export system permease LptF/LptG APS46_RS22350 PF00356 Bacterial regulatory proteins, lacI family APS46_RS22355 PF02447 GntP family permease APS46_RS22360 PF00106 short chain dehydrogenase APS46_RS22365 PF00107 Zinc-binding dehydrogenase APS46_RS22365 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS22370 PF01202 Shikimate kinase APS46_RS22375 PF08240 Alcohol dehydrogenase GroES-like domain APS46_RS22375 PF00107 Zinc-binding dehydrogenase APS46_RS22385 PF00589 Phage integrase family APS46_RS22385 PF13356 Arm DNA-binding domain APS46_RS22400 PF12137 RNA polymerase recycling family C-terminal APS46_RS22400 PF18337 RapA N-terminal Tudor like domain APS46_RS22400 PF18339 RapA N-terminal Tudor like domain 1 APS46_RS22400 PF00176 SNF2 family N-terminal domain APS46_RS22400 PF00271 Helicase conserved C-terminal domain APS46_RS22410 PF00271 Helicase conserved C-terminal domain APS46_RS22410 PF09369 Domain of unknown function (DUF1998) APS46_RS22410 PF00270 DEAD/DEAH box helicase APS46_RS22415 PF13361 UvrD-like helicase C-terminal domain APS46_RS22415 PF00580 UvrD/REP helicase N-terminal domain APS46_RS22420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS46_RS22435 PF01709 Transcriptional regulator APS46_RS22440 PF13847 Methyltransferase domain APS46_RS22445 PF09857 Putative toxin of bacterial toxin-antitoxin pair APS46_RS22465 PF03625 Domain of unknown function DUF302 APS46_RS22465 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APS46_RS22470 PF01738 Dienelactone hydrolase family APS46_RS22475 PF07729 FCD domain APS46_RS22475 PF00392 Bacterial regulatory proteins, gntR family APS46_RS22480 PF00579 tRNA synthetases class I (W and Y) APS46_RS22495 PF01177 Asp/Glu/Hydantoin racemase APS46_RS22500 PF03466 LysR substrate binding domain APS46_RS22500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS46_RS22505 PF01979 Amidohydrolase family APS46_RS22510 PF07670 Nucleoside recognition APS46_RS22515 PF07670 Nucleoside recognition APS46_RS22525 PF06779 Uncharacterised MFS-type transporter YbfB APS46_RS22530 PF04286 Protein of unknown function (DUF445) APS46_RS22535 PF07690 Major Facilitator Superfamily APS46_RS22540 PF04754 Putative transposase, YhgA-like APS46_RS22540 PF04754 Putative transposase, YhgA-like APS46_RS22545 PF00171 Aldehyde dehydrogenase family APS46_RS22565 PF08845 Toxin SymE, type I toxin-antitoxin system APS46_RS22570 PF01420 Type I restriction modification DNA specificity domain APS46_RS22575 PF02384 N-6 DNA Methylase APS46_RS22580 PF04851 Type III restriction enzyme, res subunit APS46_RS22580 PF08463 EcoEI R protein C-terminal APS46_RS22580 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APS46_RS22580 PF00271 Helicase conserved C-terminal domain APS46_RS22585 PF04471 Restriction endonuclease APS46_RS22585 PF14338 Mrr N-terminal domain APS46_RS22600 PF02492 CobW/HypB/UreG, nucleotide-binding domain APS46_RS22600 PF07683 Cobalamin synthesis protein cobW C-terminal domain APS46_RS22605 PF04328 Selenoprotein, putative APS46_RS22610 PF13722 5TM C-terminal transporter carbon starvation CstA APS46_RS22610 PF02554 Carbon starvation protein CstA APS46_RS22615 PF00672 HAMP domain APS46_RS22615 PF02203 Tar ligand binding domain homologue APS46_RS22615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APS46_RS22620 PF00158 Sigma-54 interaction domain APS46_RS22620 PF00874 PRD domain APS46_RS22630 PF03830 PTS system sorbose subfamily IIB component APS46_RS22635 PF03609 PTS system sorbose-specific iic component APS46_RS22640 PF03613 PTS system mannose/fructose/sorbose family IID component APS46_RS22645 PF01380 SIS domain APS46_RS22650 PF01380 SIS domain APS46_RS22655 PF00884 Sulfatase APS46_RS22660 PF10696 Protein of unknown function (DUF2501) APS46_RS22665 PF01695 IstB-like ATP binding protein APS46_RS22670 PF17948 DnaT DNA-binding domain APS46_RS22675 PF12821 Threonine/Serine exporter, ThrE APS46_RS22680 PF06738 Putative threonine/serine exporter APS46_RS22685 PF00196 Bacterial regulatory proteins, luxR family APS46_RS22690 PF00196 Bacterial regulatory proteins, luxR family APS46_RS22695 PF04073 Aminoacyl-tRNA editing domain APS46_RS22700 PF11575 FhuF 2Fe-2S C-terminal domain APS46_RS22700 PF06276 Ferric iron reductase FhuF-like transporter APS46_RS22705 PF00990 Diguanylate cyclase, GGDEF domain APS46_RS22705 PF05230 MASE2 domain APS46_RS22710 PF07256 Protein of unknown function (DUF1435) APS46_RS22730 PF08468 Methyltransferase small domain N-terminal APS46_RS22730 PF05175 Methyltransferase small domain APS46_RS22735 PF03603 DNA polymerase III psi subunit APS46_RS22740 PF00583 Acetyltransferase (GNAT) family APS46_RS22745 PF13419 Haloacid dehalogenase-like hydrolase APS46_RS22750 PF03144 Elongation factor Tu domain 2 APS46_RS22750 PF16658 Class II release factor RF3, C-terminal domain APS46_RS22750 PF00009 Elongation factor Tu GTP binding domain APS46_RS22755 PF04972 BON domain APS46_RS22760 PF07043 Protein of unknown function (DUF1328) APS46_RS22765 PF01734 Patatin-like phospholipase APS46_RS22770 PF01026 TatD related DNase APS46_RS22775 PF04055 Radical SAM superfamily APS46_RS22780 PF11230 Protein of unknown function (DUF3029) APS46_RS22785 PF01791 DeoC/LacD family aldolase APS46_RS22790 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain APS46_RS22790 PF00591 Glycosyl transferase family, a/b domain APS46_RS22790 PF02885 Glycosyl transferase family, helical bundle domain APS46_RS22795 PF01676 Metalloenzyme superfamily APS46_RS22800 PF01048 Phosphorylase superfamily APS46_RS22810 PF00577 Outer membrane usher protein APS46_RS22810 PF13954 PapC N-terminal domain APS46_RS22810 PF13953 PapC C-terminal domain APS46_RS22815 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS22820 PF06551 Protein of unknown function (DUF1120) APS46_RS22830 PF10437 Bacterial lipoate protein ligase C-terminus APS46_RS22830 PF03099 Biotin/lipoate A/B protein ligase family APS46_RS22835 PF10144 Bacterial virulence factor haemolysin APS46_RS22840 PF18429 Domain of unknown function (DUF5609) APS46_RS22845 PF18073 Rubredoxin metal binding domain APS46_RS22850 PF13521 AAA domain APS46_RS22850 PF01381 Helix-turn-helix APS46_RS22855 PF12848 ABC transporter APS46_RS22855 PF00005 ABC transporter APS46_RS22860 PF14718 Soluble lytic murein transglycosylase L domain APS46_RS22860 PF01464 Transglycosylase SLT domain APS46_RS22865 PF01371 Trp repressor protein APS46_RS22870 PF01931 Protein of unknown function DUF84 APS46_RS22875 PF00300 Histidine phosphatase superfamily (branch 1) APS46_RS22880 PF12833 Helix-turn-helix domain APS46_RS22880 PF06445 GyrI-like small molecule binding domain APS46_RS22885 PF05981 CreA protein APS46_RS22890 PF00072 Response regulator receiver domain APS46_RS22890 PF00486 Transcriptional regulatory protein, C terminal APS46_RS22895 PF00672 HAMP domain APS46_RS22895 PF00512 His Kinase A (phospho-acceptor) domain APS46_RS22895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS46_RS22900 PF06123 Inner membrane protein CreD APS46_RS22920 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS22920 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS22930 PF15977 Winged helix-turn-helix DNA binding APS46_RS22940 PF00486 Transcriptional regulatory protein, C terminal APS46_RS22940 PF00072 Response regulator receiver domain APS46_RS22950 PF00588 SpoU rRNA Methylase family APS46_RS22960 PF03447 Homoserine dehydrogenase, NAD binding domain APS46_RS22960 PF00742 Homoserine dehydrogenase APS46_RS22960 PF13840 ACT domain APS46_RS22960 PF01842 ACT domain APS46_RS22960 PF00696 Amino acid kinase family APS46_RS23110 PF02753 Pili assembly chaperone PapD, C-terminal domain APS46_RS23110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APS46_RS23165 PF00742 Homoserine dehydrogenase APS46_RS23165 PF13840 ACT domain APS46_RS23165 PF01842 ACT domain APS46_RS23165 PF00696 Amino acid kinase family APS46_RS23165 PF03447 Homoserine dehydrogenase, NAD binding domain APS46_RS23180 PF14821 Threonine synthase N terminus APS46_RS23180 PF00291 Pyridoxal-phosphate dependent enzyme APS46_RS23395 PF16385 Domain of unknown function APS46_RS23395 PF00884 Sulfatase APS46_RS23605 PF02028 BCCT, betaine/carnitine/choline family transporter APS46_RS23665 PF00999 Sodium/hydrogen exchanger family APS46_RS23665 PF02254 TrkA-N domain APS46_RS23690 PF00398 Ribosomal RNA adenine dimethylase