locus-tag class description SEEM42N_RS00005 PF00258 Flavodoxin SEEM42N_RS00010 PF13932 GidA associated domain SEEM42N_RS00010 PF01134 Glucose inhibited division protein A SEEM42N_RS00015 PF02527 rRNA small subunit methyltransferase G SEEM42N_RS00020 PF03899 ATP synthase I chain SEEM42N_RS00025 PF00119 ATP synthase A chain SEEM42N_RS00030 PF00137 ATP synthase subunit C SEEM42N_RS00035 PF00430 ATP synthase B/B' CF(0) SEEM42N_RS00040 PF00213 ATP synthase delta (OSCP) subunit SEEM42N_RS00045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEM42N_RS00045 PF00306 ATP synthase alpha/beta chain, C terminal domain SEEM42N_RS00045 PF02874 ATP synthase alpha/beta family, beta-barrel domain SEEM42N_RS00050 PF00231 ATP synthase SEEM42N_RS00055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEM42N_RS00055 PF02874 ATP synthase alpha/beta family, beta-barrel domain SEEM42N_RS00060 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SEEM42N_RS00060 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SEEM42N_RS00070 PF00132 Bacterial transferase hexapeptide (six repeats) SEEM42N_RS00070 PF12804 MobA-like NTP transferase domain SEEM42N_RS00075 PF01380 SIS domain SEEM42N_RS00080 PF12793 Sugar transport-related sRNA regulator N-term SEEM42N_RS00080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEM42N_RS00085 PF08501 Shikimate dehydrogenase substrate binding domain SEEM42N_RS00090 PF02378 Phosphotransferase system, EIIC SEEM42N_RS00090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEM42N_RS00095 PF12849 PBP superfamily domain SEEM42N_RS00100 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS00105 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS00110 PF00005 ABC transporter SEEM42N_RS00115 PF01895 PhoU domain SEEM42N_RS00120 PF13419 Haloacid dehalogenase-like hydrolase SEEM42N_RS00125 PF00860 Permease family SEEM42N_RS00130 PF03358 NADPH-dependent FMN reductase SEEM42N_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS00140 PF03466 LysR substrate binding domain SEEM42N_RS00145 PF07690 Major Facilitator Superfamily SEEM42N_RS00150 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SEEM42N_RS00165 PF01926 50S ribosome-binding GTPase SEEM42N_RS00165 PF10396 GTP-binding protein TrmE N-terminus SEEM42N_RS00165 PF12631 MnmE helical domain SEEM42N_RS00170 PF02096 60Kd inner membrane protein SEEM42N_RS00170 PF14849 YidC periplasmic domain SEEM42N_RS00175 PF01809 Putative membrane protein insertion efficiency factor SEEM42N_RS00180 PF00825 Ribonuclease P SEEM42N_RS00185 PF00468 Ribosomal protein L34 SEEM42N_RS00190 PF00308 Bacterial dnaA protein SEEM42N_RS00190 PF08299 Bacterial dnaA protein helix-turn-helix SEEM42N_RS00190 PF11638 DnaA N-terminal domain SEEM42N_RS00195 PF00712 DNA polymerase III beta subunit, N-terminal domain SEEM42N_RS00195 PF02767 DNA polymerase III beta subunit, central domain SEEM42N_RS00195 PF02768 DNA polymerase III beta subunit, C-terminal domain SEEM42N_RS00200 PF02463 RecF/RecN/SMC N terminal domain SEEM42N_RS00205 PF18053 DNA gyrase B subunit insert domain SEEM42N_RS00205 PF00204 DNA gyrase B SEEM42N_RS00205 PF00986 DNA gyrase B subunit, carboxyl terminus SEEM42N_RS00205 PF01751 Toprim domain SEEM42N_RS00205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS00210 PF03466 LysR substrate binding domain SEEM42N_RS00215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEM42N_RS00215 PF13378 Enolase C-terminal domain-like SEEM42N_RS00220 PF07690 Major Facilitator Superfamily SEEM42N_RS00230 PF07729 FCD domain SEEM42N_RS00230 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS00235 PF05035 2-keto-3-deoxy-galactonokinase SEEM42N_RS00240 PF01081 KDPG and KHG aldolase SEEM42N_RS00245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEM42N_RS00245 PF13378 Enolase C-terminal domain-like SEEM42N_RS00250 PF07690 Major Facilitator Superfamily SEEM42N_RS00255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS00255 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS00255 PF01627 Hpt domain SEEM42N_RS00255 PF00072 Response regulator receiver domain SEEM42N_RS00255 PF00672 HAMP domain SEEM42N_RS00260 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SEEM42N_RS00265 PF00072 Response regulator receiver domain SEEM42N_RS00265 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS00270 PF03264 NapC/NirT cytochrome c family, N-terminal region SEEM42N_RS00275 PF18364 Molybdopterin oxidoreductase N-terminal domain SEEM42N_RS00275 PF00384 Molybdopterin oxidoreductase SEEM42N_RS00275 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS00280 PF02613 Nitrate reductase delta subunit SEEM42N_RS00285 PF00034 Cytochrome c SEEM42N_RS00285 PF14376 Haem-binding domain SEEM42N_RS00285 PF03150 Di-haem cytochrome c peroxidase SEEM42N_RS00290 PF00005 ABC transporter SEEM42N_RS00295 PF03379 CcmB protein SEEM42N_RS00300 PF01578 Cytochrome C assembly protein SEEM42N_RS00305 PF04995 Heme exporter protein D (CcmD) SEEM42N_RS00310 PF03100 CcmE SEEM42N_RS00315 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SEEM42N_RS00315 PF01578 Cytochrome C assembly protein SEEM42N_RS00320 PF08534 Redoxin SEEM42N_RS00325 PF03918 Cytochrome C biogenesis protein SEEM42N_RS00330 PF07676 WD40-like Beta Propeller Repeat SEEM42N_RS00330 PF12566 Protein of unknown function (DUF3748) SEEM42N_RS00335 PF07119 Protein of unknown function (DUF1375) SEEM42N_RS00340 PF00011 Hsp20/alpha crystallin family SEEM42N_RS00345 PF00011 Hsp20/alpha crystallin family SEEM42N_RS00350 PF02080 TrkA-C domain SEEM42N_RS00350 PF06826 Predicted Permease Membrane Region SEEM42N_RS00360 PF02656 Domain of unknown function (DUF202) SEEM42N_RS00365 PF02656 Domain of unknown function (DUF202) SEEM42N_RS00375 PF00291 Pyridoxal-phosphate dependent enzyme SEEM42N_RS00380 PF02447 GntP family permease SEEM42N_RS00385 PF03466 LysR substrate binding domain SEEM42N_RS00385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS00395 PF07690 Major Facilitator Superfamily SEEM42N_RS00405 PF13939 Toxin TisB, type I toxin-antitoxin system SEEM42N_RS00415 PF08049 IlvB leader peptide SEEM42N_RS00420 PF00205 Thiamine pyrophosphate enzyme, central domain SEEM42N_RS00420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEM42N_RS00420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEM42N_RS00425 PF01842 ACT domain SEEM42N_RS00430 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS00430 PF00455 DeoR C terminal sensor domain SEEM42N_RS00435 PF00294 pfkB family carbohydrate kinase SEEM42N_RS00440 PF07690 Major Facilitator Superfamily SEEM42N_RS00450 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS00450 PF00072 Response regulator receiver domain SEEM42N_RS00455 PF07730 Histidine kinase SEEM42N_RS00455 PF05231 MASE1 SEEM42N_RS00455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS00460 PF07690 Major Facilitator Superfamily SEEM42N_RS00465 PF07690 Major Facilitator Superfamily SEEM42N_RS00470 PF06711 Protein of unknown function (DUF1198) SEEM42N_RS00475 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS00475 PF07702 UTRA domain SEEM42N_RS00480 PF05043 Mga helix-turn-helix domain SEEM42N_RS00480 PF08279 HTH domain SEEM42N_RS00480 PF00874 PRD domain SEEM42N_RS00480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEM42N_RS00485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEM42N_RS00490 PF03611 PTS system sugar-specific permease component SEEM42N_RS00500 PF01116 Fructose-bisphosphate aldolase class-II SEEM42N_RS00520 PF07690 Major Facilitator Superfamily SEEM42N_RS00525 PF00232 Glycosyl hydrolase family 1 SEEM42N_RS00535 PF00874 PRD domain SEEM42N_RS00535 PF00158 Sigma-54 interaction domain SEEM42N_RS00545 PF03610 PTS system fructose IIA component SEEM42N_RS00545 PF03830 PTS system sorbose subfamily IIB component SEEM42N_RS00550 PF03609 PTS system sorbose-specific iic component SEEM42N_RS00555 PF03613 PTS system mannose/fructose/sorbose family IID component SEEM42N_RS00560 PF03841 L-seryl-tRNA selenium transferase SEEM42N_RS00565 PF07071 KDGP aldolase SEEM42N_RS00570 PF04754 Putative transposase, YhgA-like SEEM42N_RS00575 PF00892 EamA-like transporter family SEEM42N_RS00580 PF02308 MgtC family SEEM42N_RS00585 PF00689 Cation transporting ATPase, C-terminus SEEM42N_RS00585 PF00690 Cation transporter/ATPase, N-terminus SEEM42N_RS00600 PF00857 Isochorismatase family SEEM42N_RS00610 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS00620 PF03797 Autotransporter beta-domain SEEM42N_RS00625 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS00645 PF01055 Glycosyl hydrolases family 31 SEEM42N_RS00645 PF13802 Galactose mutarotase-like SEEM42N_RS00650 PF05170 AsmA family SEEM42N_RS00655 PF00860 Permease family SEEM42N_RS00660 PF03616 Sodium/glutamate symporter SEEM42N_RS00665 PF00270 DEAD/DEAH box helicase SEEM42N_RS00665 PF17191 RecG wedge domain SEEM42N_RS00665 PF00271 Helicase conserved C-terminal domain SEEM42N_RS00670 PF00588 SpoU rRNA Methylase family SEEM42N_RS00670 PF12105 SpoU, rRNA methylase, C-terminal SEEM42N_RS00675 PF13291 ACT domain SEEM42N_RS00675 PF04607 Region found in RelA / SpoT proteins SEEM42N_RS00675 PF02824 TGS domain SEEM42N_RS00680 PF01192 RNA polymerase Rpb6 SEEM42N_RS00685 PF00625 Guanylate kinase SEEM42N_RS00690 PF03120 NAD-dependent DNA ligase OB-fold domain SEEM42N_RS00690 PF01653 NAD-dependent DNA ligase adenylation domain SEEM42N_RS00695 PF03458 UPF0126 domain SEEM42N_RS00705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS00705 PF03466 LysR substrate binding domain SEEM42N_RS00710 PF03755 YicC-like family, N-terminal region SEEM42N_RS00710 PF08340 Domain of unknown function (DUF1732) SEEM42N_RS00715 PF03725 3' exoribonuclease family, domain 2 SEEM42N_RS00715 PF01138 3' exoribonuclease family, domain 1 SEEM42N_RS00720 PF00156 Phosphoribosyl transferase domain SEEM42N_RS00725 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS00730 PF00692 dUTPase SEEM42N_RS00735 PF02441 Flavoprotein SEEM42N_RS00735 PF04127 DNA / pantothenate metabolism flavoprotein SEEM42N_RS00740 PF04002 RadC-like JAB domain SEEM42N_RS00745 PF00830 Ribosomal L28 family SEEM42N_RS00750 PF00471 Ribosomal protein L33 SEEM42N_RS00755 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SEEM42N_RS00755 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SEEM42N_RS00755 PF06827 Zinc finger found in FPG and IleRS SEEM42N_RS00760 PF01467 Cytidylyltransferase-like SEEM42N_RS00765 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SEEM42N_RS00770 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SEEM42N_RS00775 PF00534 Glycosyl transferases group 1 SEEM42N_RS00775 PF13439 Glycosyltransferase Family 4 SEEM42N_RS00790 PF00534 Glycosyl transferases group 1 SEEM42N_RS00790 PF13439 Glycosyltransferase Family 4 SEEM42N_RS00795 PF01501 Glycosyl transferase family 8 SEEM42N_RS00795 PF08437 Glycosyl transferase family 8 C-terminal SEEM42N_RS00800 PF01501 Glycosyl transferase family 8 SEEM42N_RS00800 PF08437 Glycosyl transferase family 8 C-terminal SEEM42N_RS00805 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) SEEM42N_RS00815 PF00534 Glycosyl transferases group 1 SEEM42N_RS00820 PF04932 O-Antigen ligase SEEM42N_RS00825 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SEEM42N_RS00830 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SEEM42N_RS00835 PF01370 NAD dependent epimerase/dehydratase family SEEM42N_RS00840 PF00155 Aminotransferase class I and II SEEM42N_RS00845 PF00107 Zinc-binding dehydrogenase SEEM42N_RS00845 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS00850 PF00535 Glycosyl transferase family 2 SEEM42N_RS00855 PF04748 Divergent polysaccharide deacetylase SEEM42N_RS00860 PF01551 Peptidase family M23 SEEM42N_RS00865 PF01676 Metalloenzyme superfamily SEEM42N_RS00865 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SEEM42N_RS00870 PF00581 Rhodanese-like domain SEEM42N_RS00875 PF00462 Glutaredoxin SEEM42N_RS00880 PF02556 Preprotein translocase subunit SecB SEEM42N_RS00885 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SEEM42N_RS00885 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SEEM42N_RS00890 PF00132 Bacterial transferase hexapeptide (six repeats) SEEM42N_RS00890 PF06426 Serine acetyltransferase, N-terminal SEEM42N_RS00895 PF00588 SpoU rRNA Methylase family SEEM42N_RS00900 PF01070 FMN-dependent dehydrogenase SEEM42N_RS00905 PF07729 FCD domain SEEM42N_RS00905 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS00910 PF02652 L-lactate permease SEEM42N_RS00915 PF05658 Head domain of trimeric autotransporter adhesin SEEM42N_RS00915 PF03895 YadA-like membrane anchor domain SEEM42N_RS00915 PF05662 Coiled stalk of trimeric autotransporter adhesin SEEM42N_RS00915 PF13018 Extended Signal Peptide of Type V secretion system SEEM42N_RS00920 PF11622 Protein of unknown function (DUF3251) SEEM42N_RS00925 PF10928 Protein of unknown function (DUF2810) SEEM42N_RS00935 PF05068 Mannitol repressor SEEM42N_RS00940 PF01232 Mannitol dehydrogenase Rossmann domain SEEM42N_RS00940 PF08125 Mannitol dehydrogenase C-terminal domain SEEM42N_RS00945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEM42N_RS00945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEM42N_RS00945 PF02378 Phosphotransferase system, EIIC SEEM42N_RS00950 PF13417 Glutathione S-transferase, N-terminal domain SEEM42N_RS00950 PF00043 Glutathione S-transferase, C-terminal domain SEEM42N_RS00955 PF12390 Selenocysteine synthase N terminal SEEM42N_RS00955 PF03841 L-seryl-tRNA selenium transferase SEEM42N_RS00960 PF00009 Elongation factor Tu GTP binding domain SEEM42N_RS00960 PF09107 Elongation factor SelB, winged helix SEEM42N_RS00960 PF03144 Elongation factor Tu domain 2 SEEM42N_RS00960 PF09106 Elongation factor SelB, winged helix SEEM42N_RS00965 PF00480 ROK family SEEM42N_RS00970 PF00171 Aldehyde dehydrogenase family SEEM42N_RS00980 PF07944 Beta-L-arabinofuranosidase, GH127 SEEM42N_RS00990 PF00596 Class II Aldolase and Adducin N-terminal domain SEEM42N_RS00995 PF01261 Xylose isomerase-like TIM barrel SEEM42N_RS01000 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SEEM42N_RS01005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEM42N_RS01005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEM42N_RS01010 PF03480 Bacterial extracellular solute-binding protein, family 7 SEEM42N_RS01015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SEEM42N_RS01020 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SEEM42N_RS01025 PF16154 Domain of unknown function (DUF4862) SEEM42N_RS01030 PF04074 YhcH/YjgK/YiaL SEEM42N_RS01035 PF02615 Malate/L-lactate dehydrogenase SEEM42N_RS01040 PF01614 Bacterial transcriptional regulator SEEM42N_RS01040 PF09339 IclR helix-turn-helix domain SEEM42N_RS01045 PF13247 4Fe-4S dicluster domain SEEM42N_RS01050 PF00155 Aminotransferase class I and II SEEM42N_RS01055 PF00128 Alpha amylase, catalytic domain SEEM42N_RS01060 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SEEM42N_RS01065 PF12833 Helix-turn-helix domain SEEM42N_RS01075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEM42N_RS01075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEM42N_RS01080 PF05360 yiaA/B two helix domain SEEM42N_RS01085 PF01757 Acyltransferase family SEEM42N_RS01090 PF13983 YsaB-like lipoprotein SEEM42N_RS01095 PF02091 Glycyl-tRNA synthetase alpha subunit SEEM42N_RS01100 PF05746 DALR anticodon binding domain SEEM42N_RS01100 PF02092 Glycyl-tRNA synthetase beta subunit SEEM42N_RS01110 PF00313 'Cold-shock' DNA-binding domain SEEM42N_RS01115 PF01381 Helix-turn-helix SEEM42N_RS01120 PF11254 Protein of unknown function (DUF3053) SEEM42N_RS01125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SEEM42N_RS01125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SEEM42N_RS01130 PF00691 OmpA family SEEM42N_RS01130 PF13488 Glycine zipper SEEM42N_RS01135 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS01135 PF00384 Molybdopterin oxidoreductase SEEM42N_RS01135 PF18364 Molybdopterin oxidoreductase N-terminal domain SEEM42N_RS01140 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS01145 PF03352 Methyladenine glycosylase SEEM42N_RS01150 PF03797 Autotransporter beta-domain SEEM42N_RS01155 PF08019 Phosphoethanolamine transferase EptA/EptB SEEM42N_RS01155 PF00884 Sulfatase SEEM42N_RS01180 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS01190 PF00860 Permease family SEEM42N_RS01195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEM42N_RS01200 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS01205 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEM42N_RS01205 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS01210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEM42N_RS01210 PF00005 ABC transporter SEEM42N_RS01215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEM42N_RS01215 PF00005 ABC transporter SEEM42N_RS01220 PF03222 Tryptophan/tyrosine permease family SEEM42N_RS01230 PF13940 Toxin Ldr, type I toxin-antitoxin system SEEM42N_RS01235 PF11658 Cellulose biosynthesis protein BcsG SEEM42N_RS01240 PF11120 Cellulose biosynthesis protein BcsF SEEM42N_RS01245 PF10995 Cellulose biosynthesis GIL SEEM42N_RS01250 PF10945 Cellulose biosynthesis protein BcsR SEEM42N_RS01255 PF06564 Cellulose biosynthesis protein BcsQ SEEM42N_RS01260 PF07238 PilZ domain SEEM42N_RS01260 PF00535 Glycosyl transferase family 2 SEEM42N_RS01260 PF03552 Cellulose synthase SEEM42N_RS01265 PF03170 Bacterial cellulose synthase subunit SEEM42N_RS01270 PF01270 Glycosyl hydrolases family 8 SEEM42N_RS01275 PF13176 Tetratricopeptide repeat SEEM42N_RS01275 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) SEEM42N_RS01280 PF00672 HAMP domain SEEM42N_RS01280 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS01280 PF17154 Gammaproteobacterial periplasmic sensor domain SEEM42N_RS01280 PF00563 EAL domain SEEM42N_RS01285 PF00375 Sodium:dicarboxylate symporter family SEEM42N_RS01290 PF05193 Peptidase M16 inactive domain SEEM42N_RS01290 PF00675 Insulinase (Peptidase family M16) SEEM42N_RS01295 PF00294 pfkB family carbohydrate kinase SEEM42N_RS01300 PF00563 EAL domain SEEM42N_RS01305 PF05170 AsmA family SEEM42N_RS01310 PF00083 Sugar (and other) transporter SEEM42N_RS01310 PF07690 Major Facilitator Superfamily SEEM42N_RS01315 PF03631 Virulence factor BrkB SEEM42N_RS01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS01320 PF03466 LysR substrate binding domain SEEM42N_RS01325 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS01340 PF01204 Trehalase SEEM42N_RS01345 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS01345 PF07702 UTRA domain SEEM42N_RS01350 PF01380 SIS domain SEEM42N_RS01355 PF00294 pfkB family carbohydrate kinase SEEM42N_RS01360 PF03605 Anaerobic c4-dicarboxylate membrane transporter SEEM42N_RS01365 PF17763 Glutaminase/Asparaginase C-terminal domain SEEM42N_RS01365 PF00710 Asparaginase, N-terminal SEEM42N_RS01370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SEEM42N_RS01370 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS01375 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SEEM42N_RS01380 PF01569 PAP2 superfamily SEEM42N_RS01385 PF01432 Peptidase family M3 SEEM42N_RS01390 PF04445 Putative SAM-dependent methyltransferase SEEM42N_RS01395 PF00854 POT family SEEM42N_RS01400 PF00582 Universal stress protein family SEEM42N_RS01405 PF10625 Universal stress protein B (UspB) SEEM42N_RS01410 PF01384 Phosphate transporter family SEEM42N_RS01420 PF13533 Biotin-lipoyl like SEEM42N_RS01425 PF00005 ABC transporter SEEM42N_RS01435 PF08753 NikR C terminal nickel binding domain SEEM42N_RS01435 PF01402 Ribbon-helix-helix protein, copG family SEEM42N_RS01440 PF01648 4'-phosphopantetheinyl transferase superfamily SEEM42N_RS01445 PF01594 AI-2E family transporter SEEM42N_RS01450 PF07690 Major Facilitator Superfamily SEEM42N_RS01455 PF08786 DcrB SEEM42N_RS01460 PF02592 Putative vitamin uptake transporter SEEM42N_RS01465 PF01206 Sulfurtransferase TusA SEEM42N_RS01470 PF02203 Tar ligand binding domain homologue SEEM42N_RS01470 PF00672 HAMP domain SEEM42N_RS01470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEM42N_RS01475 PF00403 Heavy-metal-associated domain SEEM42N_RS01480 PF07947 YhhN family SEEM42N_RS01485 PF10694 Protein of unknown function (DUF2500) SEEM42N_RS01490 PF06611 Protein of unknown function (DUF1145) SEEM42N_RS01500 PF02881 SRP54-type protein, helical bundle domain SEEM42N_RS01500 PF00448 SRP54-type protein, GTPase domain SEEM42N_RS01505 PF00005 ABC transporter SEEM42N_RS01510 PF18075 FtsX extracellular domain SEEM42N_RS01510 PF02687 FtsX-like permease family SEEM42N_RS01515 PF04542 Sigma-70 region 2 SEEM42N_RS01515 PF04545 Sigma-70, region 4 SEEM42N_RS01520 PF13458 Periplasmic binding protein SEEM42N_RS01525 PF12568 Acetyltransferase (GNAT) domain, PanZ SEEM42N_RS01530 PF13458 Periplasmic binding protein SEEM42N_RS01535 PF02653 Branched-chain amino acid transport system / permease component SEEM42N_RS01540 PF11862 Domain of unknown function (DUF3382) SEEM42N_RS01540 PF02653 Branched-chain amino acid transport system / permease component SEEM42N_RS01545 PF00005 ABC transporter SEEM42N_RS01545 PF12399 Branched-chain amino acid ATP-binding cassette transporter SEEM42N_RS01550 PF00005 ABC transporter SEEM42N_RS01555 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SEEM42N_RS01565 PF13416 Bacterial extracellular solute-binding protein SEEM42N_RS01570 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS01575 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS01580 PF00005 ABC transporter SEEM42N_RS01580 PF17912 MalK OB fold domain SEEM42N_RS01585 PF03009 Glycerophosphoryl diester phosphodiesterase family SEEM42N_RS01590 PF10956 Protein of unknown function (DUF2756) SEEM42N_RS01600 PF02126 Phosphotriesterase family SEEM42N_RS01615 PF00294 pfkB family carbohydrate kinase SEEM42N_RS01620 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS01625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SEEM42N_RS01625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEM42N_RS01630 PF02678 Pirin SEEM42N_RS01630 PF17954 Quercetinase C-terminal cupin domain SEEM42N_RS01635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SEEM42N_RS01635 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS01640 PF01202 Shikimate kinase SEEM42N_RS01645 PF02447 GntP family permease SEEM42N_RS01655 PF02774 Semialdehyde dehydrogenase, dimerisation domain SEEM42N_RS01655 PF01118 Semialdehyde dehydrogenase, NAD binding domain SEEM42N_RS01660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SEEM42N_RS01660 PF02806 Alpha amylase, C-terminal all-beta domain SEEM42N_RS01660 PF00128 Alpha amylase, catalytic domain SEEM42N_RS01665 PF00128 Alpha amylase, catalytic domain SEEM42N_RS01665 PF18390 Glycogen debranching enzyme C-terminal domain SEEM42N_RS01665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SEEM42N_RS01670 PF00483 Nucleotidyl transferase SEEM42N_RS01675 PF08323 Starch synthase catalytic domain SEEM42N_RS01675 PF00534 Glycosyl transferases group 1 SEEM42N_RS01680 PF00343 Carbohydrate phosphorylase SEEM42N_RS01685 PF09339 IclR helix-turn-helix domain SEEM42N_RS01685 PF01614 Bacterial transcriptional regulator SEEM42N_RS01690 PF00701 Dihydrodipicolinate synthetase family SEEM42N_RS01695 PF00920 Dehydratase family SEEM42N_RS01700 PF07690 Major Facilitator Superfamily SEEM42N_RS01705 PF00465 Iron-containing alcohol dehydrogenase SEEM42N_RS01725 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SEEM42N_RS01725 PF01266 FAD dependent oxidoreductase SEEM42N_RS01730 PF00581 Rhodanese-like domain SEEM42N_RS01735 PF01694 Rhomboid family SEEM42N_RS01735 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease SEEM42N_RS01740 PF00455 DeoR C terminal sensor domain SEEM42N_RS01740 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS01745 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS01745 PF17874 MalT-like TPR region SEEM42N_RS01750 PF00343 Carbohydrate phosphorylase SEEM42N_RS01755 PF02446 4-alpha-glucanotransferase SEEM42N_RS01760 PF02447 GntP family permease SEEM42N_RS01765 PF01521 Iron-sulphur cluster biosynthesis SEEM42N_RS01765 PF01106 NifU-like domain SEEM42N_RS01770 PF00156 Phosphoribosyl transferase domain SEEM42N_RS01775 PF00561 alpha/beta hydrolase fold SEEM42N_RS01780 PF04754 Putative transposase, YhgA-like SEEM42N_RS01785 PF09012 FeoC like transcriptional regulator SEEM42N_RS01790 PF07670 Nucleoside recognition SEEM42N_RS01790 PF07664 Ferrous iron transport protein B C terminus SEEM42N_RS01790 PF17910 FeoB cytosolic helical domain SEEM42N_RS01790 PF02421 Ferrous iron transport protein B SEEM42N_RS01795 PF04023 FeoA domain SEEM42N_RS01800 PF16921 Tex protein YqgF-like domain SEEM42N_RS01800 PF09371 Tex-like protein N-terminal domain SEEM42N_RS01800 PF17674 HHH domain SEEM42N_RS01800 PF00575 S1 RNA binding domain SEEM42N_RS01805 PF03449 Transcription elongation factor, N-terminal SEEM42N_RS01805 PF01272 Transcription elongation factor, GreA/GreB, C-term SEEM42N_RS01810 PF00072 Response regulator receiver domain SEEM42N_RS01810 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS01815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS01815 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS01815 PF00672 HAMP domain SEEM42N_RS01825 PF13687 Domain of unknown function (DUF4153) SEEM42N_RS01830 PF01430 Hsp33 protein SEEM42N_RS01835 PF01479 S4 domain SEEM42N_RS01840 PF13419 Haloacid dehalogenase-like hydrolase SEEM42N_RS01845 PF07095 Intracellular growth attenuator protein IgaA SEEM42N_RS01850 PF00293 NUDIX domain SEEM42N_RS01855 PF00905 Penicillin binding protein transpeptidase domain SEEM42N_RS01855 PF00912 Transglycosylase SEEM42N_RS01855 PF17092 Penicillin-binding protein OB-like domain SEEM42N_RS01865 PF05137 Fimbrial assembly protein (PilN) SEEM42N_RS01875 PF10748 DNA utilization proteins HofP SEEM42N_RS01880 PF03958 Bacterial type II/III secretion system short domain SEEM42N_RS01880 PF00263 Bacterial type II and III secretion system protein SEEM42N_RS01885 PF01202 Shikimate kinase SEEM42N_RS01890 PF01761 3-dehydroquinate synthase SEEM42N_RS01895 PF05036 Sporulation related domain SEEM42N_RS01900 PF02086 D12 class N6 adenine-specific DNA methyltransferase SEEM42N_RS01905 PF00834 Ribulose-phosphate 3 epimerase family SEEM42N_RS01910 PF13419 Haloacid dehalogenase-like hydrolase SEEM42N_RS01915 PF00579 tRNA synthetases class I (W and Y) SEEM42N_RS01920 PF13978 Protein of unknown function (DUF4223) SEEM42N_RS01930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEM42N_RS01930 PF14824 Sirohaem biosynthesis protein central SEEM42N_RS01930 PF10414 Sirohaem synthase dimerisation region SEEM42N_RS01935 PF01226 Formate/nitrite transporter SEEM42N_RS01940 PF13806 Rieske-like [2Fe-2S] domain SEEM42N_RS01945 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS01945 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SEEM42N_RS01945 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SEEM42N_RS01945 PF04324 BFD-like [2Fe-2S] binding domain SEEM42N_RS01945 PF18267 Rubredoxin NAD+ reductase C-terminal domain SEEM42N_RS01950 PF07690 Major Facilitator Superfamily SEEM42N_RS01955 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SEEM42N_RS01960 PF10832 Protein of unknown function (DUF2559) SEEM42N_RS01965 PF02661 Fic/DOC family SEEM42N_RS01970 PF00117 Glutamine amidotransferase class-I SEEM42N_RS01975 PF00202 Aminotransferase class-III SEEM42N_RS01980 PF12805 FUSC-like inner membrane protein yccS SEEM42N_RS01985 PF00027 Cyclic nucleotide-binding domain SEEM42N_RS01985 PF13545 Crp-like helix-turn-helix domain SEEM42N_RS01990 PF02566 OsmC-like protein SEEM42N_RS01995 PF00485 Phosphoribulokinase / Uridine kinase family SEEM42N_RS02000 PF06794 Uncharacterised protein family (UPF0270) SEEM42N_RS02005 PF00561 alpha/beta hydrolase fold SEEM42N_RS02010 PF08803 Putative mono-oxygenase ydhR SEEM42N_RS02015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS02015 PF03466 LysR substrate binding domain SEEM42N_RS02020 PF00005 ABC transporter SEEM42N_RS02020 PF12848 ABC transporter SEEM42N_RS02025 PF02525 Flavodoxin-like fold SEEM42N_RS02030 PF00999 Sodium/hydrogen exchanger family SEEM42N_RS02030 PF02254 TrkA-N domain SEEM42N_RS02035 PF09526 Probable metal-binding protein (DUF2387) SEEM42N_RS02040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SEEM42N_RS02045 PF04102 SlyX SEEM42N_RS02050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SEEM42N_RS02050 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SEEM42N_RS02055 PF01797 Transposase IS200 like SEEM42N_RS02060 PF08348 YheO-like PAS domain SEEM42N_RS02060 PF13309 HTH domain SEEM42N_RS02065 PF02635 DsrE/DsrF-like family SEEM42N_RS02070 PF02635 DsrE/DsrF-like family SEEM42N_RS02075 PF04077 DsrH like protein SEEM42N_RS02080 PF00164 Ribosomal protein S12/S23 SEEM42N_RS02085 PF00177 Ribosomal protein S7p/S5e SEEM42N_RS02090 PF03764 Elongation factor G, domain IV SEEM42N_RS02090 PF03144 Elongation factor Tu domain 2 SEEM42N_RS02090 PF14492 Elongation Factor G, domain II SEEM42N_RS02090 PF00679 Elongation factor G C-terminus SEEM42N_RS02090 PF00009 Elongation factor Tu GTP binding domain SEEM42N_RS02095 PF03143 Elongation factor Tu C-terminal domain SEEM42N_RS02095 PF00009 Elongation factor Tu GTP binding domain SEEM42N_RS02095 PF03144 Elongation factor Tu domain 2 SEEM42N_RS02100 PF04324 BFD-like [2Fe-2S] binding domain SEEM42N_RS02105 PF00210 Ferritin-like domain SEEM42N_RS02110 PF01478 Type IV leader peptidase family SEEM42N_RS02115 PF00338 Ribosomal protein S10p/S20e SEEM42N_RS02120 PF00297 Ribosomal protein L3 SEEM42N_RS02125 PF00573 Ribosomal protein L4/L1 family SEEM42N_RS02130 PF00276 Ribosomal protein L23 SEEM42N_RS02135 PF00181 Ribosomal Proteins L2, RNA binding domain SEEM42N_RS02135 PF03947 Ribosomal Proteins L2, C-terminal domain SEEM42N_RS02140 PF00203 Ribosomal protein S19 SEEM42N_RS02145 PF00237 Ribosomal protein L22p/L17e SEEM42N_RS02150 PF07650 KH domain SEEM42N_RS02150 PF00189 Ribosomal protein S3, C-terminal domain SEEM42N_RS02155 PF00252 Ribosomal protein L16p/L10e SEEM42N_RS02160 PF00831 Ribosomal L29 protein SEEM42N_RS02165 PF00366 Ribosomal protein S17 SEEM42N_RS02170 PF00238 Ribosomal protein L14p/L23e SEEM42N_RS02175 PF00467 KOW motif SEEM42N_RS02175 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SEEM42N_RS02180 PF00281 Ribosomal protein L5 SEEM42N_RS02180 PF00673 ribosomal L5P family C-terminus SEEM42N_RS02185 PF00253 Ribosomal protein S14p/S29e SEEM42N_RS02190 PF00410 Ribosomal protein S8 SEEM42N_RS02195 PF00347 Ribosomal protein L6 SEEM42N_RS02200 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SEEM42N_RS02205 PF00333 Ribosomal protein S5, N-terminal domain SEEM42N_RS02205 PF03719 Ribosomal protein S5, C-terminal domain SEEM42N_RS02210 PF00327 Ribosomal protein L30p/L7e SEEM42N_RS02215 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SEEM42N_RS02220 PF00344 SecY translocase SEEM42N_RS02225 PF00444 Ribosomal protein L36 SEEM42N_RS02230 PF00416 Ribosomal protein S13/S18 SEEM42N_RS02235 PF00411 Ribosomal protein S11 SEEM42N_RS02240 PF01479 S4 domain SEEM42N_RS02240 PF00163 Ribosomal protein S4/S9 N-terminal domain SEEM42N_RS02245 PF01000 RNA polymerase Rpb3/RpoA insert domain SEEM42N_RS02245 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SEEM42N_RS02245 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SEEM42N_RS02250 PF01196 Ribosomal protein L17 SEEM42N_RS02255 PF09350 Domain of unknown function (DUF1992) SEEM42N_RS02260 PF13411 MerR HTH family regulatory protein SEEM42N_RS02265 PF03889 Alternative ribosome-rescue factor A SEEM42N_RS02270 PF01741 Large-conductance mechanosensitive channel, MscL SEEM42N_RS02275 PF02254 TrkA-N domain SEEM42N_RS02275 PF02080 TrkA-C domain SEEM42N_RS02280 PF01189 16S rRNA methyltransferase RsmB/F SEEM42N_RS02280 PF01029 NusB family SEEM42N_RS02285 PF00551 Formyl transferase SEEM42N_RS02285 PF02911 Formyl transferase, C-terminal domain SEEM42N_RS02290 PF01327 Polypeptide deformylase SEEM42N_RS02295 PF02481 DNA recombination-mediator protein A SEEM42N_RS02295 PF17782 DprA winged helix domain SEEM42N_RS02300 PF04361 Protein of unknown function (DUF494) SEEM42N_RS02305 PF01396 Topoisomerase DNA binding C4 zinc finger SEEM42N_RS02310 PF01300 Telomere recombination SEEM42N_RS02315 PF01488 Shikimate / quinate 5-dehydrogenase SEEM42N_RS02315 PF08501 Shikimate dehydrogenase substrate binding domain SEEM42N_RS02315 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SEEM42N_RS02320 PF07369 Protein of unknown function (DUF1488) SEEM42N_RS02325 PF00132 Bacterial transferase hexapeptide (six repeats) SEEM42N_RS02370 PF00873 AcrB/AcrD/AcrF family SEEM42N_RS02375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEM42N_RS02375 PF00529 HlyD membrane-fusion protein of T1SS SEEM42N_RS02380 PF08361 MAATS-type transcriptional repressor, C-terminal region SEEM42N_RS02380 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS02385 PF00563 EAL domain SEEM42N_RS02385 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS02385 PF03707 Bacterial signalling protein N terminal repeat SEEM42N_RS02390 PF10831 Protein of unknown function (DUF2556) SEEM42N_RS02395 PF01555 DNA methylase SEEM42N_RS02400 PF02954 Bacterial regulatory protein, Fis family SEEM42N_RS02405 PF01207 Dihydrouridine synthase (Dus) SEEM42N_RS02415 PF00474 Sodium:solute symporter family SEEM42N_RS02420 PF06196 Protein of unknown function (DUF997) SEEM42N_RS02425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SEEM42N_RS02425 PF02785 Biotin carboxylase C-terminal domain SEEM42N_RS02425 PF00289 Biotin carboxylase, N-terminal domain SEEM42N_RS02430 PF00364 Biotin-requiring enzyme SEEM42N_RS02435 PF01794 Ferric reductase like transmembrane component SEEM42N_RS02440 PF00174 Oxidoreductase molybdopterin binding domain SEEM42N_RS02445 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS02445 PF00107 Zinc-binding dehydrogenase SEEM42N_RS02450 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS02450 PF00563 EAL domain SEEM42N_RS02450 PF17157 Gammaproteobacterial periplasmic sensor domain SEEM42N_RS02460 PF04085 rod shape-determining protein MreC SEEM42N_RS02465 PF04093 rod shape-determining protein MreD SEEM42N_RS02470 PF02545 Maf-like protein SEEM42N_RS02475 PF00575 S1 RNA binding domain SEEM42N_RS02475 PF10150 Ribonuclease E/G family SEEM42N_RS02480 PF13116 Protein of unknown function SEEM42N_RS02480 PF13502 AsmA-like C-terminal region SEEM42N_RS02485 PF01523 Putative modulator of DNA gyrase SEEM42N_RS02490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS02490 PF03466 LysR substrate binding domain SEEM42N_RS02495 PF07869 Protein of unknown function (DUF1656) SEEM42N_RS02500 PF13533 Biotin-lipoyl like SEEM42N_RS02505 PF04632 Fusaric acid resistance protein family SEEM42N_RS02510 PF01337 Barstar (barnase inhibitor) SEEM42N_RS02515 PF07338 Protein of unknown function (DUF1471) SEEM42N_RS02520 PF07338 Protein of unknown function (DUF1471) SEEM42N_RS02525 PF02863 Arginine repressor, C-terminal domain SEEM42N_RS02525 PF01316 Arginine repressor, DNA binding domain SEEM42N_RS02530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SEEM42N_RS02530 PF00056 lactate/malate dehydrogenase, NAD binding domain SEEM42N_RS02535 PF07702 UTRA domain SEEM42N_RS02535 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS02545 PF00939 Sodium:sulfate symporter transmembrane region SEEM42N_RS02550 PF05681 Fumarate hydratase (Fumerase) SEEM42N_RS02555 PF05683 Fumarase C-terminus SEEM42N_RS02560 PF04277 Oxaloacetate decarboxylase, gamma chain SEEM42N_RS02565 PF00682 HMGL-like SEEM42N_RS02565 PF02436 Conserved carboxylase domain SEEM42N_RS02565 PF00364 Biotin-requiring enzyme SEEM42N_RS02570 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SEEM42N_RS02575 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SEEM42N_RS02580 PF13180 PDZ domain SEEM42N_RS02585 PF13180 PDZ domain SEEM42N_RS02585 PF00595 PDZ domain SEEM42N_RS02590 PF06295 Protein of unknown function (DUF1043) SEEM42N_RS02595 PF03969 AFG1-like ATPase SEEM42N_RS02600 PF00572 Ribosomal protein L13 SEEM42N_RS02605 PF00380 Ribosomal protein S9/S16 SEEM42N_RS02615 PF00043 Glutathione S-transferase, C-terminal domain SEEM42N_RS02615 PF02798 Glutathione S-transferase, N-terminal domain SEEM42N_RS02620 PF04386 Stringent starvation protein B SEEM42N_RS02625 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS02625 PF07729 FCD domain SEEM42N_RS02630 PF00701 Dihydrodipicolinate synthetase family SEEM42N_RS02635 PF07690 Major Facilitator Superfamily SEEM42N_RS02640 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SEEM42N_RS02645 PF00480 ROK family SEEM42N_RS02650 PF04074 YhcH/YjgK/YiaL SEEM42N_RS02655 PF07969 Amidohydrolase family SEEM42N_RS02660 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SEEM42N_RS02665 PF17761 DUF1016 N-terminal domain SEEM42N_RS02665 PF06250 YhcG PDDEXK nuclease domain SEEM42N_RS02670 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS02670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SEEM42N_RS02675 PF01645 Conserved region in glutamate synthase SEEM42N_RS02675 PF01493 GXGXG motif SEEM42N_RS02675 PF04898 Glutamate synthase central domain SEEM42N_RS02675 PF00310 Glutamine amidotransferases class-II SEEM42N_RS02680 PF16199 Radical_SAM C-terminal domain SEEM42N_RS02680 PF04055 Radical SAM superfamily SEEM42N_RS02685 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS02685 PF18415 Histidine kinase receptor ArcB trans-membrane domain SEEM42N_RS02685 PF01627 Hpt domain SEEM42N_RS02685 PF00989 PAS fold SEEM42N_RS02685 PF00072 Response regulator receiver domain SEEM42N_RS02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS02695 PF00912 Transglycosylase SEEM42N_RS02700 PF10707 PhoP regulatory network protein YrbL SEEM42N_RS02705 PF00381 PTS HPr component phosphorylation site SEEM42N_RS02710 PF03668 P-loop ATPase protein family SEEM42N_RS02715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEM42N_RS02720 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SEEM42N_RS02725 PF00309 Sigma-54 factor, Activator interacting domain (AID) SEEM42N_RS02725 PF04552 Sigma-54, DNA binding domain SEEM42N_RS02725 PF04963 Sigma-54 factor, core binding domain SEEM42N_RS02730 PF00005 ABC transporter SEEM42N_RS02730 PF12399 Branched-chain amino acid ATP-binding cassette transporter SEEM42N_RS02735 PF03968 OstA-like protein SEEM42N_RS02740 PF06835 Lipopolysaccharide-assembly, LptC-related SEEM42N_RS02750 PF00571 CBS domain SEEM42N_RS02750 PF01380 SIS domain SEEM42N_RS02755 PF01699 Sodium/calcium exchanger protein SEEM42N_RS02760 PF00005 ABC transporter SEEM42N_RS02765 PF02405 Permease MlaE SEEM42N_RS02770 PF02470 MlaD protein SEEM42N_RS02775 PF05494 MlaC protein SEEM42N_RS02780 PF13466 STAS domain SEEM42N_RS02785 PF01722 BolA-like protein SEEM42N_RS02790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SEEM42N_RS02795 PF13693 Winged helix-turn-helix DNA-binding SEEM42N_RS02800 PF00348 Polyprenyl synthetase SEEM42N_RS02805 PF00829 Ribosomal prokaryotic L21 protein SEEM42N_RS02810 PF01016 Ribosomal L27 protein SEEM42N_RS02815 PF00892 EamA-like transporter family SEEM42N_RS02820 PF01018 GTP1/OBG SEEM42N_RS02820 PF01926 50S ribosome-binding GTPase SEEM42N_RS02825 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SEEM42N_RS02830 PF03449 Transcription elongation factor, N-terminal SEEM42N_RS02830 PF01272 Transcription elongation factor, GreA/GreB, C-term SEEM42N_RS02835 PF01985 CRS1 / YhbY (CRM) domain SEEM42N_RS02840 PF01728 FtsJ-like methyltransferase SEEM42N_RS02845 PF17862 AAA+ lid domain SEEM42N_RS02845 PF00004 ATPase family associated with various cellular activities (AAA) SEEM42N_RS02845 PF06480 FtsH Extracellular SEEM42N_RS02845 PF01434 Peptidase family M41 SEEM42N_RS02850 PF00809 Pterin binding enzyme SEEM42N_RS02855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SEEM42N_RS02855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SEEM42N_RS02855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SEEM42N_RS02855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SEEM42N_RS02860 PF03840 Preprotein translocase SecG subunit SEEM42N_RS02875 PF00764 Arginosuccinate synthase SEEM42N_RS02885 PF02576 RimP N-terminal domain SEEM42N_RS02885 PF17384 RimP C-terminal SH3 domain SEEM42N_RS02890 PF13184 NusA-like KH domain SEEM42N_RS02890 PF08529 NusA N-terminal domain SEEM42N_RS02895 PF04760 Translation initiation factor IF-2, N-terminal region SEEM42N_RS02895 PF08364 Bacterial translation initiation factor IF-2 associated region SEEM42N_RS02895 PF11987 Translation-initiation factor 2 SEEM42N_RS02895 PF00009 Elongation factor Tu GTP binding domain SEEM42N_RS02900 PF02033 Ribosome-binding factor A SEEM42N_RS02905 PF01509 TruB family pseudouridylate synthase (N terminal domain) SEEM42N_RS02905 PF09157 Pseudouridine synthase II TruB, C-terminal SEEM42N_RS02905 PF16198 tRNA pseudouridylate synthase B C-terminal domain SEEM42N_RS02910 PF00312 Ribosomal protein S15 SEEM42N_RS02915 PF01138 3' exoribonuclease family, domain 1 SEEM42N_RS02915 PF03725 3' exoribonuclease family, domain 2 SEEM42N_RS02915 PF00013 KH domain SEEM42N_RS02915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SEEM42N_RS02915 PF00575 S1 RNA binding domain SEEM42N_RS02920 PF13181 Tetratricopeptide repeat SEEM42N_RS02920 PF07719 Tetratricopeptide repeat SEEM42N_RS02930 PF00271 Helicase conserved C-terminal domain SEEM42N_RS02930 PF12343 Cold shock protein DEAD box A SEEM42N_RS02930 PF03880 DbpA RNA binding domain SEEM42N_RS02930 PF00270 DEAD/DEAH box helicase SEEM42N_RS02935 PF03222 Tryptophan/tyrosine permease family SEEM42N_RS02940 PF00296 Luciferase-like monooxygenase SEEM42N_RS02945 PF01136 Peptidase family U32 SEEM42N_RS02950 PF01136 Peptidase family U32 SEEM42N_RS02955 PF02036 SCP-2 sterol transfer family SEEM42N_RS02960 PF13508 Acetyltransferase (GNAT) domain SEEM42N_RS02965 PF01541 GIY-YIG catalytic domain SEEM42N_RS02975 PF01965 DJ-1/PfpI family SEEM42N_RS02980 PF13460 NAD(P)H-binding SEEM42N_RS02985 PF04972 BON domain SEEM42N_RS02990 PF13580 SIS domain SEEM42N_RS02995 PF02021 Uncharacterised protein family UPF0102 SEEM42N_RS03000 PF04348 LppC putative lipoprotein SEEM42N_RS03005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEM42N_RS03010 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS03015 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS03015 PF00107 Zinc-binding dehydrogenase SEEM42N_RS03020 PF03611 PTS system sugar-specific permease component SEEM42N_RS03025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEM42N_RS03030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEM42N_RS03035 PF08013 Tagatose 6 phosphate kinase SEEM42N_RS03040 PF01116 Fructose-bisphosphate aldolase class-II SEEM42N_RS03045 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SEEM42N_RS03045 PF08666 SAF domain SEEM42N_RS03050 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEM42N_RS03055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SEEM42N_RS03055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SEEM42N_RS03060 PF02595 Glycerate kinase family SEEM42N_RS03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS03070 PF03466 LysR substrate binding domain SEEM42N_RS03075 PF00291 Pyridoxal-phosphate dependent enzyme SEEM42N_RS03080 PF03222 Tryptophan/tyrosine permease family SEEM42N_RS03085 PF00871 Acetokinase family SEEM42N_RS03090 PF02901 Pyruvate formate lyase-like SEEM42N_RS03090 PF01228 Glycine radical SEEM42N_RS03095 PF03313 Serine dehydratase alpha chain SEEM42N_RS03095 PF03315 Serine dehydratase beta chain SEEM42N_RS03105 PF03313 Serine dehydratase alpha chain SEEM42N_RS03115 PF17954 Quercetinase C-terminal cupin domain SEEM42N_RS03115 PF02678 Pirin SEEM42N_RS03120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS03120 PF03466 LysR substrate binding domain SEEM42N_RS03125 PF05656 Protein of unknown function (DUF805) SEEM42N_RS03130 PF13409 Glutathione S-transferase, N-terminal domain SEEM42N_RS03135 PF07681 DoxX SEEM42N_RS03140 PF13997 YqjK-like protein SEEM42N_RS03145 PF07332 Putative Actinobacterial Holin-X, holin superfamily III SEEM42N_RS03150 PF05957 Bacterial protein of unknown function (DUF883) SEEM42N_RS03155 PF06476 Protein of unknown function (DUF1090) SEEM42N_RS03160 PF13721 SecD export protein N-terminal TM region SEEM42N_RS03165 PF09335 SNARE associated Golgi protein SEEM42N_RS03170 PF00375 Sodium:dicarboxylate symporter family SEEM42N_RS03175 PF03741 Integral membrane protein TerC family SEEM42N_RS03180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEM42N_RS03185 PF02698 DUF218 domain SEEM42N_RS03190 PF01863 Protein of unknown function DUF45 SEEM42N_RS03195 PF05175 Methyltransferase small domain SEEM42N_RS03200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SEEM42N_RS03200 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS03205 PF00202 Aminotransferase class-III SEEM42N_RS03210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEM42N_RS03210 PF08447 PAS fold SEEM42N_RS03215 PF02203 Tar ligand binding domain homologue SEEM42N_RS03215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEM42N_RS03215 PF00672 HAMP domain SEEM42N_RS03220 PF03551 Transcriptional regulator PadR-like family SEEM42N_RS03225 PF08021 Siderophore-interacting FAD-binding domain SEEM42N_RS03225 PF04954 Siderophore-interacting protein SEEM42N_RS03235 PF03167 Uracil DNA glycosylase superfamily SEEM42N_RS03240 PF04542 Sigma-70 region 2 SEEM42N_RS03240 PF04545 Sigma-70, region 4 SEEM42N_RS03240 PF00140 Sigma-70 factor, region 1.2 SEEM42N_RS03240 PF04539 Sigma-70 region 3 SEEM42N_RS03240 PF04546 Sigma-70, non-essential region SEEM42N_RS03240 PF03979 Sigma-70 factor, region 1.1 SEEM42N_RS03245 PF08275 DNA primase catalytic core, N-terminal domain SEEM42N_RS03245 PF08278 DNA primase DnaG DnaB-binding SEEM42N_RS03245 PF01807 CHC2 zinc finger SEEM42N_RS03245 PF10410 DnaB-helicase binding domain of primase SEEM42N_RS03250 PF01165 Ribosomal protein S21 SEEM42N_RS03255 PF00814 Glycoprotease family SEEM42N_RS03265 PF02660 Glycerol-3-phosphate acyltransferase SEEM42N_RS03270 PF02152 Dihydroneopterin aldolase SEEM42N_RS03275 PF02673 Bacitracin resistance protein BacA SEEM42N_RS03280 PF01966 HD domain SEEM42N_RS03280 PF12627 Probable RNA and SrmB- binding site of polymerase A SEEM42N_RS03280 PF01743 Poly A polymerase head domain SEEM42N_RS03285 PF08239 Bacterial SH3 domain SEEM42N_RS03290 PF01928 CYTH domain SEEM42N_RS03295 PF03710 Glutamate-ammonia ligase adenylyltransferase SEEM42N_RS03295 PF08335 GlnD PII-uridylyltransferase SEEM42N_RS03300 PF00294 pfkB family carbohydrate kinase SEEM42N_RS03300 PF01467 Cytidylyltransferase-like SEEM42N_RS03310 PF01145 SPFH domain / Band 7 family SEEM42N_RS03310 PF15975 Flotillin SEEM42N_RS03315 PF07290 Protein of unknown function (DUF1449) SEEM42N_RS03320 PF08971 Glycogen synthesis protein SEEM42N_RS03325 PF04380 Membrane fusogenic activity SEEM42N_RS03330 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SEEM42N_RS03335 PF02600 Disulfide bond formation protein DsbB SEEM42N_RS03340 PF01323 DSBA-like thioredoxin domain SEEM42N_RS03345 PF05935 Arylsulfotransferase (ASST) SEEM42N_RS03345 PF17425 Arylsulfotransferase Ig-like domain SEEM42N_RS03350 PF02535 ZIP Zinc transporter SEEM42N_RS03355 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SEEM42N_RS03360 PF03738 Glutathionylspermidine synthase preATP-grasp SEEM42N_RS03365 PF06693 Protein of unknown function (DUF1190) SEEM42N_RS03370 PF02321 Outer membrane efflux protein SEEM42N_RS03375 PF00293 NUDIX domain SEEM42N_RS03380 PF06853 Protein of unknown function (DUF1249) SEEM42N_RS03385 PF00149 Calcineurin-like phosphoesterase SEEM42N_RS03390 PF05728 Uncharacterised protein family (UPF0227) SEEM42N_RS03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS03395 PF01751 Toprim domain SEEM42N_RS03395 PF00986 DNA gyrase B subunit, carboxyl terminus SEEM42N_RS03395 PF00204 DNA gyrase B SEEM42N_RS03400 PF03992 Antibiotic biosynthesis monooxygenase SEEM42N_RS03405 PF02525 Flavodoxin-like fold SEEM42N_RS03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS03410 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS03410 PF08521 Two-component sensor kinase N-terminal SEEM42N_RS03415 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS03415 PF00072 Response regulator receiver domain SEEM42N_RS03420 PF04076 Bacterial OB fold (BOF) protein SEEM42N_RS03425 PF06445 GyrI-like small molecule binding domain SEEM42N_RS03430 PF00521 DNA gyrase/topoisomerase IV, subunit A SEEM42N_RS03430 PF03989 DNA gyrase C-terminal domain, beta-propeller SEEM42N_RS03435 PF01553 Acyltransferase SEEM42N_RS03440 PF07732 Multicopper oxidase SEEM42N_RS03440 PF07731 Multicopper oxidase SEEM42N_RS03440 PF00394 Multicopper oxidase SEEM42N_RS03470 PF08497 Radical SAM N-terminal SEEM42N_RS03470 PF04055 Radical SAM superfamily SEEM42N_RS03470 PF11842 Domain of unknown function (DUF3362) SEEM42N_RS03485 PF00939 Sodium:sulfate symporter transmembrane region SEEM42N_RS03490 PF00248 Aldo/keto reductase family SEEM42N_RS03495 PF00465 Iron-containing alcohol dehydrogenase SEEM42N_RS03500 PF06719 AraC-type transcriptional regulator N-terminus SEEM42N_RS03500 PF12833 Helix-turn-helix domain SEEM42N_RS03505 PF09335 SNARE associated Golgi protein SEEM42N_RS03510 PF01053 Cys/Met metabolism PLP-dependent enzyme SEEM42N_RS03515 PF01618 MotA/TolQ/ExbB proton channel family SEEM42N_RS03520 PF02472 Biopolymer transport protein ExbD/TolR SEEM42N_RS03545 PF03350 Uncharacterized protein family, UPF0114 SEEM42N_RS03550 PF00672 HAMP domain SEEM42N_RS03550 PF02203 Tar ligand binding domain homologue SEEM42N_RS03550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEM42N_RS03555 PF11115 Protein of unknown function (DUF2623) SEEM42N_RS03560 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SEEM42N_RS03560 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SEEM42N_RS03565 PF13247 4Fe-4S dicluster domain SEEM42N_RS03570 PF03916 Polysulphide reductase, NrfD SEEM42N_RS03575 PF00374 Nickel-dependent hydrogenase SEEM42N_RS03580 PF01750 Hydrogenase maturation protease SEEM42N_RS03585 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE SEEM42N_RS03590 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SEEM42N_RS03595 PF01455 HupF/HypC family SEEM42N_RS03610 PF02798 Glutathione S-transferase, N-terminal domain SEEM42N_RS03615 PF05257 CHAP domain SEEM42N_RS03615 PF03738 Glutathionylspermidine synthase preATP-grasp SEEM42N_RS03625 PF02614 Glucuronate isomerase SEEM42N_RS03630 PF01232 Mannitol dehydrogenase Rossmann domain SEEM42N_RS03630 PF08125 Mannitol dehydrogenase C-terminal domain SEEM42N_RS03635 PF03786 D-mannonate dehydratase (UxuA) SEEM42N_RS03640 PF07690 Major Facilitator Superfamily SEEM42N_RS03645 PF03573 outer membrane porin, OprD family SEEM42N_RS03655 PF02837 Glycosyl hydrolases family 2, sugar binding domain SEEM42N_RS03655 PF00703 Glycosyl hydrolases family 2 SEEM42N_RS03655 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SEEM42N_RS03660 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS03670 PF01522 Polysaccharide deacetylase SEEM42N_RS03680 PF04965 Gene 25-like lysozyme SEEM42N_RS03685 PF00171 Aldehyde dehydrogenase family SEEM42N_RS03690 PF01266 FAD dependent oxidoreductase SEEM42N_RS03700 PF13520 Amino acid permease SEEM42N_RS03710 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS03715 PF04055 Radical SAM superfamily SEEM42N_RS03720 PF00884 Sulfatase SEEM42N_RS03725 PF03466 LysR substrate binding domain SEEM42N_RS03725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS03730 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEM42N_RS03735 PF01575 MaoC like domain SEEM42N_RS03740 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SEEM42N_RS03740 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SEEM42N_RS03745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SEEM42N_RS03750 PF13614 AAA domain SEEM42N_RS03755 PF03796 DnaB-like helicase C terminal domain SEEM42N_RS03755 PF00772 DnaB-like helicase N terminal domain SEEM42N_RS03765 PF01258 Prokaryotic dksA/traR C4-type zinc finger SEEM42N_RS03815 PF00436 Single-strand binding protein family SEEM42N_RS03820 PF04754 Putative transposase, YhgA-like SEEM42N_RS03860 PF00437 Type II/IV secretion system protein SEEM42N_RS03875 PF01464 Transglycosylase SLT domain SEEM42N_RS03885 PF04917 Bacterial shufflon protein, N-terminal constant region SEEM42N_RS03890 PF00589 Phage integrase family SEEM42N_RS04020 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SEEM42N_RS04020 PF08479 POTRA domain, ShlB-type SEEM42N_RS04030 PF18254 HMW1 domain 2 SEEM42N_RS04030 PF18071 HMW1C N-terminal SEEM42N_RS04185 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SEEM42N_RS04185 PF08479 POTRA domain, ShlB-type SEEM42N_RS04215 PF01507 Phosphoadenosine phosphosulfate reductase family SEEM42N_RS04215 PF11922 Domain of unknown function (DUF3440) SEEM42N_RS04235 PF07690 Major Facilitator Superfamily SEEM42N_RS04240 PF01042 Endoribonuclease L-PSP SEEM42N_RS04250 PF13309 HTH domain SEEM42N_RS04250 PF08348 YheO-like PAS domain SEEM42N_RS04255 PF00817 impB/mucB/samB family SEEM42N_RS04255 PF11799 impB/mucB/samB family C-terminal domain SEEM42N_RS04255 PF13438 Domain of unknown function (DUF4113) SEEM42N_RS04260 PF00717 Peptidase S24-like SEEM42N_RS04265 PF00580 UvrD/REP helicase N-terminal domain SEEM42N_RS04265 PF13361 UvrD-like helicase C-terminal domain SEEM42N_RS04265 PF12705 PD-(D/E)XK nuclease superfamily SEEM42N_RS04275 PF00589 Phage integrase family SEEM42N_RS04285 PF04474 Protein of unknown function (DUF554) SEEM42N_RS04290 PF01276 Orn/Lys/Arg decarboxylase, major domain SEEM42N_RS04290 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SEEM42N_RS04290 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SEEM42N_RS04295 PF03825 Nucleoside H+ symporter SEEM42N_RS04300 PF01464 Transglycosylase SLT domain SEEM42N_RS04300 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SEEM42N_RS04305 PF04362 Bacterial Fe(2+) trafficking SEEM42N_RS04310 PF00730 HhH-GPD superfamily base excision DNA repair protein SEEM42N_RS04310 PF14815 NUDIX domain SEEM42N_RS04310 PF00633 Helix-hairpin-helix motif SEEM42N_RS04315 PF02390 Putative methyltransferase SEEM42N_RS04320 PF04320 Protein with unknown function (DUF469) SEEM42N_RS04325 PF11101 Protein of unknown function (DUF2884) SEEM42N_RS04330 PF17763 Glutaminase/Asparaginase C-terminal domain SEEM42N_RS04330 PF00710 Asparaginase, N-terminal SEEM42N_RS04335 PF06717 Protein of unknown function (DUF1202) SEEM42N_RS04340 PF06969 HemN C-terminal domain SEEM42N_RS04340 PF04055 Radical SAM superfamily SEEM42N_RS04345 PF01725 Ham1 family SEEM42N_RS04350 PF02594 Uncharacterised ACR, YggU family COG1872 SEEM42N_RS04355 PF02325 YGGT family SEEM42N_RS04360 PF01168 Alanine racemase, N-terminal domain SEEM42N_RS04365 PF00437 Type II/IV secretion system protein SEEM42N_RS04375 PF03652 Holliday junction resolvase SEEM42N_RS04380 PF02622 Uncharacterized ACR, COG1678 SEEM42N_RS04385 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SEEM42N_RS04385 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SEEM42N_RS04390 PF04452 RNA methyltransferase SEEM42N_RS04395 PF04231 Endonuclease I SEEM42N_RS04400 PF17283 SprT-like zinc ribbon domain SEEM42N_RS04400 PF10263 SprT-like family SEEM42N_RS04405 PF00083 Sugar (and other) transporter SEEM42N_RS04410 PF02773 S-adenosylmethionine synthetase, C-terminal domain SEEM42N_RS04410 PF02772 S-adenosylmethionine synthetase, central domain SEEM42N_RS04410 PF00438 S-adenosylmethionine synthetase, N-terminal domain SEEM42N_RS04420 PF17430 Uncharacterized YqgC-like SEEM42N_RS04430 PF17944 Arginine decarboxylase C-terminal helical extension SEEM42N_RS04430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SEEM42N_RS04430 PF17810 Arginine decarboxylase helical bundle domain SEEM42N_RS04435 PF00491 Arginase family SEEM42N_RS04440 PF01435 Peptidase family M48 SEEM42N_RS04445 PF02780 Transketolase, C-terminal domain SEEM42N_RS04445 PF02779 Transketolase, pyrimidine binding domain SEEM42N_RS04445 PF00456 Transketolase, thiamine diphosphate binding domain SEEM42N_RS04450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEM42N_RS04455 PF02378 Phosphotransferase system, EIIC SEEM42N_RS04455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEM42N_RS04460 PF00107 Zinc-binding dehydrogenase SEEM42N_RS04460 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS04465 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SEEM42N_RS04470 PF05068 Mannitol repressor SEEM42N_RS04485 PF00005 ABC transporter SEEM42N_RS04505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SEEM42N_RS04505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SEEM42N_RS04510 PF00162 Phosphoglycerate kinase SEEM42N_RS04515 PF01116 Fructose-bisphosphate aldolase class-II SEEM42N_RS04520 PF05552 Conserved TM helix SEEM42N_RS04520 PF00924 Mechanosensitive ion channel SEEM42N_RS04525 PF01810 LysE type translocator SEEM42N_RS04530 PF04402 Protein of unknown function (DUF541) SEEM42N_RS04535 PF03466 LysR substrate binding domain SEEM42N_RS04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS04540 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SEEM42N_RS04545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SEEM42N_RS04545 PF01842 ACT domain SEEM42N_RS04545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SEEM42N_RS04550 PF01812 5-formyltetrahydrofolate cyclo-ligase family SEEM42N_RS04560 PF05164 Cell division protein ZapA SEEM42N_RS04565 PF03695 Uncharacterised protein family (UPF0149) SEEM42N_RS04570 PF00557 Metallopeptidase family M24 SEEM42N_RS04570 PF05195 Aminopeptidase P, N-terminal domain SEEM42N_RS04575 PF01494 FAD binding domain SEEM42N_RS04580 PF01494 FAD binding domain SEEM42N_RS04585 PF01571 Aminomethyltransferase folate-binding domain SEEM42N_RS04585 PF08669 Glycine cleavage T-protein C-terminal barrel domain SEEM42N_RS04590 PF01597 Glycine cleavage H-protein SEEM42N_RS04595 PF02347 Glycine cleavage system P-protein SEEM42N_RS04625 PF13401 AAA domain SEEM42N_RS04625 PF09077 Mu B transposition protein, C terminal SEEM42N_RS04700 PF08765 Mor transcription activator family SEEM42N_RS04705 PF00959 Phage lysozyme SEEM42N_RS04745 PF03237 Terminase-like family SEEM42N_RS04750 PF06074 Protein of unknown function (DUF935) SEEM42N_RS04755 PF04233 Phage Mu protein F like protein SEEM42N_RS04765 PF05069 Phage virion morphogenesis family SEEM42N_RS04775 PF10124 Mu-like prophage major head subunit gpT SEEM42N_RS04790 PF08873 Domain of unknown function (DUF1834) SEEM42N_RS04800 PF17482 Phage tail sheath C-terminal domain SEEM42N_RS04800 PF04984 Phage tail sheath protein subtilisin-like domain SEEM42N_RS04810 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 SEEM42N_RS04830 PF06890 Bacteriophage Mu Gp45 protein SEEM42N_RS04840 PF04865 Baseplate J-like protein SEEM42N_RS04880 PF00145 C-5 cytosine-specific DNA methylase SEEM42N_RS04895 PF03006 Haemolysin-III related SEEM42N_RS04900 PF01571 Aminomethyltransferase folate-binding domain SEEM42N_RS04905 PF03937 Flavinator of succinate dehydrogenase SEEM42N_RS04910 PF07254 Membrane-bound toxin component of toxin-antitoxin system SEEM42N_RS04915 PF00258 Flavodoxin SEEM42N_RS04920 PF02899 Phage integrase, N-terminal SAM-like domain SEEM42N_RS04920 PF00589 Phage integrase family SEEM42N_RS04925 PF10411 Disulfide bond isomerase protein N-terminus SEEM42N_RS04925 PF13098 Thioredoxin-like domain SEEM42N_RS04930 PF01368 DHH family SEEM42N_RS04930 PF17768 RecJ OB domain SEEM42N_RS04930 PF02272 DHHA1 domain SEEM42N_RS04940 PF00152 tRNA synthetases class II (D, K and N) SEEM42N_RS04940 PF01336 OB-fold nucleic acid binding domain SEEM42N_RS04945 PF00293 NUDIX domain SEEM42N_RS04950 PF01551 Peptidase family M23 SEEM42N_RS04950 PF01476 LysM domain SEEM42N_RS04970 PF13505 Outer membrane protein beta-barrel domain SEEM42N_RS04980 PF00419 Fimbrial protein SEEM42N_RS04985 PF13953 PapC C-terminal domain SEEM42N_RS04985 PF00577 Outer membrane usher protein SEEM42N_RS04985 PF13954 PapC N-terminal domain SEEM42N_RS04990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS04990 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS05010 PF03824 High-affinity nickel-transport protein SEEM42N_RS05015 PF02583 Metal-sensitive transcriptional repressor SEEM42N_RS05020 PF03222 Tryptophan/tyrosine permease family SEEM42N_RS05030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS05030 PF03466 LysR substrate binding domain SEEM42N_RS05035 PF02803 Thiolase, C-terminal domain SEEM42N_RS05035 PF00108 Thiolase, N-terminal domain SEEM42N_RS05040 PF04962 KduI/IolB family SEEM42N_RS05050 PF00083 Sugar (and other) transporter SEEM42N_RS05055 PF01177 Asp/Glu/Hydantoin racemase SEEM42N_RS05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS05060 PF03466 LysR substrate binding domain SEEM42N_RS05065 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SEEM42N_RS05065 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SEEM42N_RS05070 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS05075 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS05080 PF00501 AMP-binding enzyme SEEM42N_RS05080 PF01553 Acyltransferase SEEM42N_RS05085 PF07690 Major Facilitator Superfamily SEEM42N_RS05090 PF00248 Aldo/keto reductase family SEEM42N_RS05095 PF06004 Bacterial protein of unknown function (DUF903) SEEM42N_RS05100 PF03741 Integral membrane protein TerC family SEEM42N_RS05105 PF02976 DNA mismatch repair enzyme MutH SEEM42N_RS05110 PF00293 NUDIX domain SEEM42N_RS05115 PF05524 PEP-utilising enzyme, N-terminal SEEM42N_RS05115 PF01590 GAF domain SEEM42N_RS05115 PF02896 PEP-utilising enzyme, TIM barrel domain SEEM42N_RS05115 PF00391 PEP-utilising enzyme, mobile domain SEEM42N_RS05120 PF01790 Prolipoprotein diacylglyceryl transferase SEEM42N_RS05125 PF00303 Thymidylate synthase SEEM42N_RS05130 PF07963 Prokaryotic N-terminal methylation motif SEEM42N_RS05135 PF07963 Prokaryotic N-terminal methylation motif SEEM42N_RS05140 PF10713 Protein of unknown function (DUF2509) SEEM42N_RS05145 PF07963 Prokaryotic N-terminal methylation motif SEEM42N_RS05145 PF12528 Type II secretion prepilin peptidase dependent protein C SEEM42N_RS05150 PF17946 RecC C-terminal domain SEEM42N_RS05155 PF16187 Middle or third domain of peptidase_M16 SEEM42N_RS05155 PF05193 Peptidase M16 inactive domain SEEM42N_RS05155 PF00675 Insulinase (Peptidase family M16) SEEM42N_RS05160 PF13361 UvrD-like helicase C-terminal domain SEEM42N_RS05160 PF00580 UvrD/REP helicase N-terminal domain SEEM42N_RS05160 PF12705 PD-(D/E)XK nuclease superfamily SEEM42N_RS05165 PF13538 UvrD-like helicase C-terminal domain SEEM42N_RS05170 PF00696 Amino acid kinase family SEEM42N_RS05170 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS05175 PF01520 N-acetylmuramoyl-L-alanine amidase SEEM42N_RS05175 PF11741 AMIN domain SEEM42N_RS05190 PF06725 3D domain SEEM42N_RS05190 PF03562 MltA specific insert domain SEEM42N_RS05195 PF00899 ThiF family SEEM42N_RS05200 PF00892 EamA-like transporter family SEEM42N_RS05205 PF02657 Fe-S metabolism associated domain SEEM42N_RS05210 PF00266 Aminotransferase class-V SEEM42N_RS05215 PF06004 Bacterial protein of unknown function (DUF903) SEEM42N_RS05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS05220 PF03466 LysR substrate binding domain SEEM42N_RS05225 PF04241 Protein of unknown function (DUF423) SEEM42N_RS05230 PF01728 FtsJ-like methyltransferase SEEM42N_RS05230 PF18125 RlmM ferredoxin-like domain SEEM42N_RS05235 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS05235 PF00455 DeoR C terminal sensor domain SEEM42N_RS05240 PF05025 RbsD / FucU transport protein family SEEM42N_RS05245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEM42N_RS05245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEM42N_RS05250 PF02952 L-fucose isomerase, C-terminal domain SEEM42N_RS05250 PF07881 L-fucose isomerase, first N-terminal domain SEEM42N_RS05250 PF07882 L-fucose isomerase, second N-terminal domain SEEM42N_RS05255 PF07690 Major Facilitator Superfamily SEEM42N_RS05260 PF00596 Class II Aldolase and Adducin N-terminal domain SEEM42N_RS05265 PF00465 Iron-containing alcohol dehydrogenase SEEM42N_RS05270 PF01367 5'-3' exonuclease, C-terminal SAM fold SEEM42N_RS05270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SEEM42N_RS05275 PF03313 Serine dehydratase alpha chain SEEM42N_RS05275 PF03315 Serine dehydratase beta chain SEEM42N_RS05285 PF03641 Possible lysine decarboxylase SEEM42N_RS05285 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SEEM42N_RS05285 PF11892 Domain of unknown function (DUF3412) SEEM42N_RS05290 PF14489 QueF-like protein SEEM42N_RS05290 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term SEEM42N_RS05295 PF07348 Syd protein (SUKH-2) SEEM42N_RS05305 PF04287 tRNA pseudouridine synthase C SEEM42N_RS05310 PF00849 RNA pseudouridylate synthase SEEM42N_RS05315 PF00258 Flavodoxin SEEM42N_RS05325 PF07690 Major Facilitator Superfamily SEEM42N_RS05330 PF13378 Enolase C-terminal domain-like SEEM42N_RS05330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEM42N_RS05335 PF13378 Enolase C-terminal domain-like SEEM42N_RS05340 PF02595 Glycerate kinase family SEEM42N_RS05345 PF00072 Response regulator receiver domain SEEM42N_RS05345 PF01627 Hpt domain SEEM42N_RS05345 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS05345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS05345 PF00672 HAMP domain SEEM42N_RS05345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SEEM42N_RS05350 PF01938 TRAM domain SEEM42N_RS05350 PF05958 tRNA (Uracil-5-)-methyltransferase SEEM42N_RS05355 PF04607 Region found in RelA / SpoT proteins SEEM42N_RS05355 PF13291 ACT domain SEEM42N_RS05355 PF02824 TGS domain SEEM42N_RS05370 PF03819 MazG nucleotide pyrophosphohydrolase domain SEEM42N_RS05375 PF00117 Glutamine amidotransferase class-I SEEM42N_RS05375 PF06418 CTP synthase N-terminus SEEM42N_RS05380 PF00113 Enolase, C-terminal TIM barrel domain SEEM42N_RS05380 PF03952 Enolase, N-terminal domain SEEM42N_RS05385 PF04055 Radical SAM superfamily SEEM42N_RS05390 PF12706 Beta-lactamase superfamily domain SEEM42N_RS05390 PF03099 Biotin/lipoate A/B protein ligase family SEEM42N_RS05395 PF01242 6-pyruvoyl tetrahydropterin synthase SEEM42N_RS05400 PF00258 Flavodoxin SEEM42N_RS05400 PF00175 Oxidoreductase NAD-binding domain SEEM42N_RS05400 PF00667 FAD binding domain SEEM42N_RS05405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SEEM42N_RS05405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SEEM42N_RS05410 PF01507 Phosphoadenosine phosphosulfate reductase family SEEM42N_RS05415 PF11047 Salmonella outer protein D SEEM42N_RS05425 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) SEEM42N_RS05435 PF09344 CT1975-like protein SEEM42N_RS05440 PF09704 CRISPR-associated protein (Cas_Cas5) SEEM42N_RS05450 PF01867 CRISPR associated protein Cas1 SEEM42N_RS05455 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) SEEM42N_RS05460 PF04389 Peptidase family M28 SEEM42N_RS05465 PF01507 Phosphoadenosine phosphosulfate reductase family SEEM42N_RS05470 PF00009 Elongation factor Tu GTP binding domain SEEM42N_RS05480 PF12084 Protein of unknown function (DUF3561) SEEM42N_RS05485 PF04977 Septum formation initiator SEEM42N_RS05490 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SEEM42N_RS05495 PF02542 YgbB family SEEM42N_RS05500 PF01142 tRNA pseudouridine synthase D (TruD) SEEM42N_RS05505 PF01975 Survival protein SurE SEEM42N_RS05515 PF01476 LysM domain SEEM42N_RS05515 PF01551 Peptidase family M23 SEEM42N_RS05520 PF04545 Sigma-70, region 4 SEEM42N_RS05520 PF04539 Sigma-70 region 3 SEEM42N_RS05520 PF04542 Sigma-70 region 2 SEEM42N_RS05520 PF00140 Sigma-70 factor, region 1.2 SEEM42N_RS05530 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SEEM42N_RS05535 PF02441 Flavoprotein SEEM42N_RS05540 PF01047 MarR family SEEM42N_RS05545 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS05545 PF00455 DeoR C terminal sensor domain SEEM42N_RS05550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SEEM42N_RS05550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SEEM42N_RS05555 PF07005 Sugar-binding N-terminal domain SEEM42N_RS05555 PF17042 Nucleotide-binding C-terminal domain SEEM42N_RS05560 PF00596 Class II Aldolase and Adducin N-terminal domain SEEM42N_RS05565 PF01261 Xylose isomerase-like TIM barrel SEEM42N_RS05570 PF01370 NAD dependent epimerase/dehydratase family SEEM42N_RS05575 PF02447 GntP family permease SEEM42N_RS05580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS05580 PF03466 LysR substrate binding domain SEEM42N_RS05585 PF07690 Major Facilitator Superfamily SEEM42N_RS05595 PF00488 MutS domain V SEEM42N_RS05595 PF05190 MutS family domain IV SEEM42N_RS05595 PF01624 MutS domain I SEEM42N_RS05595 PF05188 MutS domain II SEEM42N_RS05595 PF05192 MutS domain III SEEM42N_RS05620 PF00149 Calcineurin-like phosphoesterase SEEM42N_RS05660 PF04741 InvH outer membrane lipoprotein SEEM42N_RS05665 PF12833 Helix-turn-helix domain SEEM42N_RS05670 PF03958 Bacterial type II/III secretion system short domain SEEM42N_RS05670 PF00263 Bacterial type II and III secretion system protein SEEM42N_RS05675 PF07201 HrpJ-like domain SEEM42N_RS05680 PF00771 FHIPEP family SEEM42N_RS05685 PF03519 Invasion protein B family SEEM42N_RS05690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEM42N_RS05690 PF02874 ATP synthase alpha/beta family, beta-barrel domain SEEM42N_RS05690 PF18269 T3SS EscN ATPase C-terminal domain SEEM42N_RS05695 PF02090 Salmonella surface presentation of antigen gene type M protein SEEM42N_RS05700 PF02510 Surface presentation of antigens protein SEEM42N_RS05705 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SEEM42N_RS05710 PF00813 FliP family SEEM42N_RS05715 PF01313 Bacterial export proteins, family 3 SEEM42N_RS05720 PF01311 Bacterial export proteins, family 1 SEEM42N_RS05725 PF01312 FlhB HrpN YscU SpaS Family SEEM42N_RS05730 PF07720 Tetratricopeptide repeat SEEM42N_RS05735 PF16535 Type III cell invasion protein SipB SEEM42N_RS05735 PF04888 Secretion system effector C (SseC) like family SEEM42N_RS05740 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) SEEM42N_RS05745 PF06511 Type III secretion systems tip complex components SEEM42N_RS05750 PF09052 SipA N-terminal domain SEEM42N_RS05755 PF00550 Phosphopantetheine attachment site SEEM42N_RS05765 PF05932 Tir chaperone protein (CesT) family SEEM42N_RS05770 PF00102 Protein-tyrosine phosphatase SEEM42N_RS05770 PF03545 Yersinia virulence determinant (YopE) SEEM42N_RS05770 PF09119 SicP binding SEEM42N_RS05775 PF01464 Transglycosylase SLT domain SEEM42N_RS05780 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS05785 PF12833 Helix-turn-helix domain SEEM42N_RS05790 PF09480 Type III secretion system protein PrgH-EprH (PrgH) SEEM42N_RS05795 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF SEEM42N_RS05805 PF01514 Secretory protein of YscJ/FliF family SEEM42N_RS05810 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) SEEM42N_RS05825 PF12833 Helix-turn-helix domain SEEM42N_RS05835 PF00950 ABC 3 transport family SEEM42N_RS05840 PF00950 ABC 3 transport family SEEM42N_RS05845 PF00005 ABC transporter SEEM42N_RS05850 PF01297 Zinc-uptake complex component A periplasmic SEEM42N_RS05855 PF11756 Nitrous oxide-stimulated promoter SEEM42N_RS05860 PF01590 GAF domain SEEM42N_RS05860 PF00158 Sigma-54 interaction domain SEEM42N_RS05860 PF02954 Bacterial regulatory protein, Fis family SEEM42N_RS05865 PF00586 AIR synthase related protein, N-terminal domain SEEM42N_RS05865 PF02769 AIR synthase related protein, C-terminal domain SEEM42N_RS05870 PF01924 Hydrogenase formation hypA family SEEM42N_RS05875 PF01455 HupF/HypC family SEEM42N_RS05880 PF02492 CobW/HypB/UreG, nucleotide-binding domain SEEM42N_RS05885 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SEEM42N_RS05890 PF11046 Transcriptional repressor of hyc and hyp operons SEEM42N_RS05895 PF13247 4Fe-4S dicluster domain SEEM42N_RS05900 PF00361 Proton-conducting membrane transporter SEEM42N_RS05905 PF00146 NADH dehydrogenase SEEM42N_RS05910 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SEEM42N_RS05910 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SEEM42N_RS05910 PF00374 Nickel-dependent hydrogenase SEEM42N_RS05915 PF12838 4Fe-4S dicluster domain SEEM42N_RS05920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SEEM42N_RS05925 PF07450 Formate hydrogenlyase maturation protein HycH SEEM42N_RS05930 PF01750 Hydrogenase maturation protease SEEM42N_RS05940 PF12800 4Fe-4S binding domain SEEM42N_RS05940 PF13247 4Fe-4S dicluster domain SEEM42N_RS05945 PF00708 Acylphosphatase SEEM42N_RS05945 PF07503 HypF finger SEEM42N_RS05945 PF01300 Telomere recombination SEEM42N_RS05945 PF17788 HypF Kae1-like domain SEEM42N_RS05950 PF18113 Rubredoxin binding C-terminal domain SEEM42N_RS05950 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS05955 PF00753 Metallo-beta-lactamase superfamily SEEM42N_RS05955 PF00258 Flavodoxin SEEM42N_RS05955 PF00301 Rubredoxin SEEM42N_RS05960 PF00158 Sigma-54 interaction domain SEEM42N_RS05960 PF01590 GAF domain SEEM42N_RS05965 PF00571 CBS domain SEEM42N_RS05965 PF01380 SIS domain SEEM42N_RS05970 PF00455 DeoR C terminal sensor domain SEEM42N_RS05970 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS05975 PF06923 Glucitol operon activator protein (GutM) SEEM42N_RS05980 PF00106 short chain dehydrogenase SEEM42N_RS05985 PF03829 PTS system glucitol/sorbitol-specific IIA component SEEM42N_RS05990 PF07663 Sorbitol phosphotransferase enzyme II C-terminus SEEM42N_RS05990 PF03612 Sorbitol phosphotransferase enzyme II N-terminus SEEM42N_RS05995 PF03608 PTS system enzyme II sorbitol-specific factor SEEM42N_RS06000 PF13406 Transglycosylase SLT domain SEEM42N_RS06005 PF02464 Competence-damaged protein SEEM42N_RS06010 PF00154 recA bacterial DNA recombination protein SEEM42N_RS06015 PF02631 RecX family SEEM42N_RS06020 PF01411 tRNA synthetases class II (A) SEEM42N_RS06020 PF02272 DHHA1 domain SEEM42N_RS06020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SEEM42N_RS06025 PF02599 Global regulator protein family SEEM42N_RS06060 PF13419 Haloacid dehalogenase-like hydrolase SEEM42N_RS06065 PF09335 SNARE associated Golgi protein SEEM42N_RS06070 PF04262 Glutamate-cysteine ligase SEEM42N_RS06075 PF02664 S-Ribosylhomocysteinase (LuxS) SEEM42N_RS06085 PF07690 Major Facilitator Superfamily SEEM42N_RS06090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEM42N_RS06090 PF00529 HlyD membrane-fusion protein of T1SS SEEM42N_RS06095 PF01047 MarR family SEEM42N_RS06100 PF07690 Major Facilitator Superfamily SEEM42N_RS06105 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SEEM42N_RS06110 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS06115 PF00005 ABC transporter SEEM42N_RS06115 PF00571 CBS domain SEEM42N_RS06120 PF00268 Ribonucleotide reductase, small chain SEEM42N_RS06125 PF08343 Ribonucleotide reductase N-terminal SEEM42N_RS06125 PF02867 Ribonucleotide reductase, barrel domain SEEM42N_RS06125 PF00317 Ribonucleotide reductase, all-alpha domain SEEM42N_RS06130 PF07972 NrdI Flavodoxin like SEEM42N_RS06135 PF00462 Glutaredoxin SEEM42N_RS06140 PF02627 Carboxymuconolactone decarboxylase family SEEM42N_RS06145 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS06145 PF00155 Aminotransferase class I and II SEEM42N_RS06150 PF05957 Bacterial protein of unknown function (DUF883) SEEM42N_RS06155 PF09400 Protein of unknown function (DUF2002) SEEM42N_RS06160 PF06610 L-alanine exporter SEEM42N_RS06165 PF00816 H-NS histone family SEEM42N_RS06175 PF00581 Rhodanese-like domain SEEM42N_RS06175 PF11127 Protein of unknown function (DUF2892) SEEM42N_RS06180 PF01022 Bacterial regulatory protein, arsR family SEEM42N_RS06185 PF01679 Proteolipid membrane potential modulator SEEM42N_RS06190 PF04972 BON domain SEEM42N_RS06190 PF01476 LysM domain SEEM42N_RS06195 PF07729 FCD domain SEEM42N_RS06195 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS06200 PF00324 Amino acid permease SEEM42N_RS06205 PF00202 Aminotransferase class-III SEEM42N_RS06210 PF00171 Aldehyde dehydrogenase family SEEM42N_RS06215 PF01266 FAD dependent oxidoreductase SEEM42N_RS06220 PF08943 CsiD SEEM42N_RS06225 PF01970 Tripartite tricarboxylate transporter TctA family SEEM42N_RS06240 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS06240 PF00072 Response regulator receiver domain SEEM42N_RS06245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS06245 PF08521 Two-component sensor kinase N-terminal SEEM42N_RS06245 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS06250 PF03824 High-affinity nickel-transport protein SEEM42N_RS06260 PF04393 Protein of unknown function (DUF535) SEEM42N_RS06265 PF00805 Pentapeptide repeats (8 copies) SEEM42N_RS06275 PF07715 TonB-dependent Receptor Plug Domain SEEM42N_RS06275 PF00593 TonB dependent receptor SEEM42N_RS06280 PF00756 Putative esterase SEEM42N_RS06290 PF00664 ABC transporter transmembrane region SEEM42N_RS06290 PF00005 ABC transporter SEEM42N_RS06295 PF06722 Protein of unknown function (DUF1205) SEEM42N_RS06335 PF00589 Phage integrase family SEEM42N_RS06335 PF13356 Arm DNA-binding domain SEEM42N_RS06345 PF00529 HlyD membrane-fusion protein of T1SS SEEM42N_RS06345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEM42N_RS06350 PF00664 ABC transporter transmembrane region SEEM42N_RS06350 PF00005 ABC transporter SEEM42N_RS06365 PF01668 SmpB protein SEEM42N_RS06370 PF03364 Polyketide cyclase / dehydrase and lipid transport SEEM42N_RS06375 PF03658 RnfH family Ubiquitin SEEM42N_RS06380 PF04355 SmpA / OmlA family SEEM42N_RS06385 PF02463 RecF/RecN/SMC N terminal domain SEEM42N_RS06390 PF01513 ATP-NAD kinase SEEM42N_RS06395 PF01025 GrpE SEEM42N_RS06405 PF00571 CBS domain SEEM42N_RS06405 PF01595 Cyclin M transmembrane N-terminal domain SEEM42N_RS06405 PF03471 Transporter associated domain SEEM42N_RS06410 PF01578 Cytochrome C assembly protein SEEM42N_RS06415 PF00448 SRP54-type protein, GTPase domain SEEM42N_RS06415 PF02881 SRP54-type protein, helical bundle domain SEEM42N_RS06415 PF02978 Signal peptide binding domain SEEM42N_RS06420 PF00886 Ribosomal protein S16 SEEM42N_RS06425 PF05239 PRC-barrel domain SEEM42N_RS06425 PF01782 RimM N-terminal domain SEEM42N_RS06430 PF01746 tRNA (Guanine-1)-methyltransferase SEEM42N_RS06435 PF01245 Ribosomal protein L19 SEEM42N_RS06440 PF17152 Periplasmic sensor domain SEEM42N_RS06440 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS06445 PF13689 YfiR/HmsC-like SEEM42N_RS06450 PF00793 DAHP synthetase I family SEEM42N_RS06455 PF01817 Chorismate mutase type II SEEM42N_RS06455 PF02153 Prephenate dehydrogenase SEEM42N_RS06460 PF08450 SMP-30/Gluconolactonase/LRE-like region SEEM42N_RS06465 PF01817 Chorismate mutase type II SEEM42N_RS06465 PF00800 Prephenate dehydratase SEEM42N_RS06475 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SEEM42N_RS06480 PF13525 Outer membrane lipoprotein SEEM42N_RS06485 PF00849 RNA pseudouridylate synthase SEEM42N_RS06485 PF01479 S4 domain SEEM42N_RS06495 PF07724 AAA domain (Cdc48 subfamily) SEEM42N_RS06495 PF17871 AAA lid domain SEEM42N_RS06495 PF02861 Clp amino terminal domain, pathogenicity island component SEEM42N_RS06495 PF00004 ATPase family associated with various cellular activities (AAA) SEEM42N_RS06495 PF10431 C-terminal, D2-small domain, of ClpB protein SEEM42N_RS06525 PF00083 Sugar (and other) transporter SEEM42N_RS06530 PF10043 Predicted periplasmic lipoprotein (DUF2279) SEEM42N_RS06535 PF13091 PLD-like domain SEEM42N_RS06540 PF13607 Succinyl-CoA ligase like flavodoxin domain SEEM42N_RS06540 PF13380 CoA binding domain SEEM42N_RS06540 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS06550 PF00085 Thioredoxin SEEM42N_RS06555 PF08032 RNA 2'-O ribose methyltransferase substrate binding SEEM42N_RS06555 PF00588 SpoU rRNA Methylase family SEEM42N_RS06560 PF03167 Uracil DNA glycosylase superfamily SEEM42N_RS06565 PF01228 Glycine radical SEEM42N_RS06570 PF01810 LysE type translocator SEEM42N_RS06575 PF03466 LysR substrate binding domain SEEM42N_RS06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS06580 PF00271 Helicase conserved C-terminal domain SEEM42N_RS06580 PF00270 DEAD/DEAH box helicase SEEM42N_RS06585 PF05175 Methyltransferase small domain SEEM42N_RS06590 PF00890 FAD binding domain SEEM42N_RS06590 PF02910 Fumarate reductase flavoprotein C-term SEEM42N_RS06600 PF04542 Sigma-70 region 2 SEEM42N_RS06600 PF08281 Sigma-70, region 4 SEEM42N_RS06605 PF03872 Anti sigma-E protein RseA, N-terminal domain SEEM42N_RS06605 PF03873 Anti sigma-E protein RseA, C-terminal domain SEEM42N_RS06610 PF03888 MucB/RseB N-terminal domain SEEM42N_RS06610 PF17188 MucB/RseB C-terminal domain SEEM42N_RS06620 PF00009 Elongation factor Tu GTP binding domain SEEM42N_RS06620 PF06421 GTP-binding protein LepA C-terminus SEEM42N_RS06620 PF00679 Elongation factor G C-terminus SEEM42N_RS06620 PF03144 Elongation factor Tu domain 2 SEEM42N_RS06625 PF10502 Signal peptidase, peptidase S26 SEEM42N_RS06630 PF00035 Double-stranded RNA binding motif SEEM42N_RS06630 PF14622 Ribonuclease-III-like SEEM42N_RS06635 PF07650 KH domain SEEM42N_RS06635 PF01926 50S ribosome-binding GTPase SEEM42N_RS06640 PF02565 Recombination protein O C terminal SEEM42N_RS06640 PF11967 Recombination protein O N terminal SEEM42N_RS06645 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SEEM42N_RS06650 PF01648 4'-phosphopantetheinyl transferase superfamily SEEM42N_RS06655 PF12838 4Fe-4S dicluster domain SEEM42N_RS06660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS06660 PF03466 LysR substrate binding domain SEEM42N_RS06665 PF07690 Major Facilitator Superfamily SEEM42N_RS06670 PF02558 Ketopantoate reductase PanE/ApbA SEEM42N_RS06670 PF08546 Ketopantoate reductase PanE/ApbA C terminal SEEM42N_RS06675 PF01418 Helix-turn-helix domain, rpiR family SEEM42N_RS06675 PF01380 SIS domain SEEM42N_RS06680 PF01380 SIS domain SEEM42N_RS06685 PF02378 Phosphotransferase system, EIIC SEEM42N_RS06685 PF00367 phosphotransferase system, EIIB SEEM42N_RS06695 PF14437 MafB19-like deaminase SEEM42N_RS06700 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEM42N_RS06700 PF01464 Transglycosylase SLT domain SEEM42N_RS06710 PF02769 AIR synthase related protein, C-terminal domain SEEM42N_RS06710 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SEEM42N_RS06710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SEEM42N_RS06715 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS06715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS06720 PF13942 YfhG lipoprotein SEEM42N_RS06725 PF00158 Sigma-54 interaction domain SEEM42N_RS06725 PF00072 Response regulator receiver domain SEEM42N_RS06730 PF00543 Nitrogen regulatory protein P-II SEEM42N_RS06735 PF00854 POT family SEEM42N_RS06740 PF01276 Orn/Lys/Arg decarboxylase, major domain SEEM42N_RS06740 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SEEM42N_RS06740 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SEEM42N_RS06745 PF13520 Amino acid permease SEEM42N_RS06750 PF18500 CadC C-terminal domain 1 SEEM42N_RS06750 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS06755 PF00042 Globin SEEM42N_RS06755 PF00970 Oxidoreductase FAD-binding domain SEEM42N_RS06755 PF00175 Oxidoreductase NAD-binding domain SEEM42N_RS06760 PF00464 Serine hydroxymethyltransferase SEEM42N_RS06765 PF12832 MFS_1 like family SEEM42N_RS06770 PF00874 PRD domain SEEM42N_RS06780 PF03824 High-affinity nickel-transport protein SEEM42N_RS06785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SEEM42N_RS06785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SEEM42N_RS06785 PF13187 4Fe-4S dicluster domain SEEM42N_RS06790 PF00175 Oxidoreductase NAD-binding domain SEEM42N_RS06790 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SEEM42N_RS06795 PF17179 4Fe-4S dicluster domain SEEM42N_RS06800 PF12146 Serine aminopeptidase, S33 SEEM42N_RS06805 PF00459 Inositol monophosphatase family SEEM42N_RS06810 PF00588 SpoU rRNA Methylase family SEEM42N_RS06815 PF02082 Transcriptional regulator SEEM42N_RS06820 PF00266 Aminotransferase class-V SEEM42N_RS06825 PF01592 NifU-like N terminal domain SEEM42N_RS06830 PF01521 Iron-sulphur cluster biosynthesis SEEM42N_RS06835 PF07743 HSCB C-terminal oligomerisation domain SEEM42N_RS06840 PF00012 Hsp70 protein SEEM42N_RS06845 PF00111 2Fe-2S iron-sulfur cluster binding domain SEEM42N_RS06850 PF04384 Iron-sulphur cluster assembly SEEM42N_RS06855 PF00883 Cytosol aminopeptidase family, catalytic domain SEEM42N_RS06855 PF12404 Peptidase SEEM42N_RS06860 PF14581 SseB protein C-terminal domain SEEM42N_RS06860 PF07179 SseB protein N-terminal domain SEEM42N_RS06865 PF00581 Rhodanese-like domain SEEM42N_RS06870 PF11974 Bacterial alpha-2-macroglobulin MG3 domain SEEM42N_RS06870 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain SEEM42N_RS06870 PF07678 A-macroglobulin TED domain SEEM42N_RS06870 PF01835 MG2 domain SEEM42N_RS06870 PF17962 Bacterial macroglobulin domain 6 SEEM42N_RS06870 PF00207 Alpha-2-macroglobulin family SEEM42N_RS06870 PF07703 Alpha-2-macroglobulin bait region domain SEEM42N_RS06870 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain SEEM42N_RS06870 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain SEEM42N_RS06875 PF06832 Penicillin-Binding Protein C-terminus Family SEEM42N_RS06875 PF00912 Transglycosylase SEEM42N_RS06875 PF00905 Penicillin binding protein transpeptidase domain SEEM42N_RS06885 PF12800 4Fe-4S binding domain SEEM42N_RS06885 PF13247 4Fe-4S dicluster domain SEEM42N_RS06900 PF00334 Nucleoside diphosphate kinase SEEM42N_RS06905 PF04055 Radical SAM superfamily SEEM42N_RS06910 PF13464 Domain of unknown function (DUF4115) SEEM42N_RS06915 PF04551 GcpE protein SEEM42N_RS06920 PF03129 Anticodon binding domain SEEM42N_RS06920 PF13393 Histidyl-tRNA synthetase SEEM42N_RS06925 PF09976 Tetratricopeptide repeat-like domain SEEM42N_RS06930 PF13360 PQQ-like domain SEEM42N_RS06935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SEEM42N_RS06935 PF01926 50S ribosome-binding GTPase SEEM42N_RS06940 PF07191 zinc-ribbons SEEM42N_RS06945 PF02368 Bacterial Ig-like domain (group 2) SEEM42N_RS06945 PF11924 Inverse autotransporter, beta-domain SEEM42N_RS06945 PF07979 Intimin C-type lectin domain SEEM42N_RS06945 PF02369 Bacterial Ig-like domain (group 1) SEEM42N_RS06945 PF01476 LysM domain SEEM42N_RS06965 PF03400 IS1 transposase SEEM42N_RS06970 PF03797 Autotransporter beta-domain SEEM42N_RS06975 PF13742 OB-fold nucleic acid binding domain SEEM42N_RS06975 PF02601 Exonuclease VII, large subunit SEEM42N_RS06980 PF00478 IMP dehydrogenase / GMP reductase domain SEEM42N_RS06980 PF00571 CBS domain SEEM42N_RS06985 PF00958 GMP synthase C terminal domain SEEM42N_RS06985 PF02540 NAD synthase SEEM42N_RS06985 PF00117 Glutamine amidotransferase class-I SEEM42N_RS06990 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) SEEM42N_RS07015 PF17358 Family of unknown function (DUF5384) SEEM42N_RS07020 PF05433 Glycine zipper 2TM domain SEEM42N_RS07025 PF11119 Protein of unknown function (DUF2633) SEEM42N_RS07035 PF05231 MASE1 SEEM42N_RS07035 PF00563 EAL domain SEEM42N_RS07040 PF02541 Ppx/GppA phosphatase family SEEM42N_RS07045 PF13089 Polyphosphate kinase N-terminal domain SEEM42N_RS07045 PF17941 Polyphosphate kinase C-terminal domain 1 SEEM42N_RS07045 PF02503 Polyphosphate kinase middle domain SEEM42N_RS07045 PF13090 Polyphosphate kinase C-terminal domain 2 SEEM42N_RS07050 PF00551 Formyl transferase SEEM42N_RS07055 PF00586 AIR synthase related protein, N-terminal domain SEEM42N_RS07055 PF02769 AIR synthase related protein, C-terminal domain SEEM42N_RS07065 PF00860 Permease family SEEM42N_RS07070 PF00308 Bacterial dnaA protein SEEM42N_RS07075 PF03960 ArsC family SEEM42N_RS07080 PF01435 Peptidase family M48 SEEM42N_RS07085 PF01594 AI-2E family transporter SEEM42N_RS07095 PF00578 AhpC/TSA family SEEM42N_RS07100 PF01842 ACT domain SEEM42N_RS07105 PF00701 Dihydrodipicolinate synthetase family SEEM42N_RS07110 PF06804 NlpB/DapX lipoprotein SEEM42N_RS07115 PF01259 SAICAR synthetase SEEM42N_RS07120 PF04228 Putative neutral zinc metallopeptidase SEEM42N_RS07125 PF13718 GNAT acetyltransferase 2 SEEM42N_RS07125 PF05127 Helicase SEEM42N_RS07125 PF17176 tRNA-binding domain SEEM42N_RS07125 PF08351 Domain of unknown function (DUF1726) SEEM42N_RS07130 PF13980 Uncharacterised protein family (UPF0370) SEEM42N_RS07135 PF01546 Peptidase family M20/M25/M40 SEEM42N_RS07135 PF07687 Peptidase dimerisation domain SEEM42N_RS07140 PF03960 ArsC family SEEM42N_RS07150 PF00873 AcrB/AcrD/AcrF family SEEM42N_RS07155 PF07730 Histidine kinase SEEM42N_RS07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS07155 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SEEM42N_RS07155 PF00672 HAMP domain SEEM42N_RS07160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SEEM42N_RS07160 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS07160 PF13247 4Fe-4S dicluster domain SEEM42N_RS07165 PF00144 Beta-lactamase SEEM42N_RS07170 PF00293 NUDIX domain SEEM42N_RS07175 PF06674 Protein of unknown function (DUF1176) SEEM42N_RS07185 PF02779 Transketolase, pyrimidine binding domain SEEM42N_RS07185 PF00456 Transketolase, thiamine diphosphate binding domain SEEM42N_RS07185 PF02780 Transketolase, C-terminal domain SEEM42N_RS07190 PF00923 Transaldolase/Fructose-6-phosphate aldolase SEEM42N_RS07195 PF00390 Malic enzyme, N-terminal domain SEEM42N_RS07195 PF01515 Phosphate acetyl/butaryl transferase SEEM42N_RS07195 PF03949 Malic enzyme, NAD binding domain SEEM42N_RS07200 PF00936 BMC domain SEEM42N_RS07205 PF10662 Ethanolamine utilisation - propanediol utilisation SEEM42N_RS07210 PF06249 Ethanolamine utilisation protein EutQ SEEM42N_RS07215 PF01923 Cobalamin adenosyltransferase SEEM42N_RS07220 PF01515 Phosphate acetyl/butaryl transferase SEEM42N_RS07225 PF00936 BMC domain SEEM42N_RS07230 PF03319 Ethanolamine utilisation protein EutN/carboxysome SEEM42N_RS07235 PF00171 Aldehyde dehydrogenase family SEEM42N_RS07245 PF00465 Iron-containing alcohol dehydrogenase SEEM42N_RS07250 PF04346 Ethanolamine utilisation protein, EutH SEEM42N_RS07255 PF06277 Ethanolamine utilisation protein EutA SEEM42N_RS07260 PF06751 Ethanolamine ammonia lyase large subunit (EutB) SEEM42N_RS07265 PF05985 Ethanolamine ammonia-lyase light chain (EutC) SEEM42N_RS07270 PF00936 BMC domain SEEM42N_RS07275 PF16365 Ethanolamine utilization protein EutK C-terminus SEEM42N_RS07275 PF00936 BMC domain SEEM42N_RS07280 PF12833 Helix-turn-helix domain SEEM42N_RS07295 PF01218 Coproporphyrinogen III oxidase SEEM42N_RS07300 PF01520 N-acetylmuramoyl-L-alanine amidase SEEM42N_RS07305 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS07310 PF11143 Protein of unknown function (DUF2919) SEEM42N_RS07315 PF06572 Protein of unknown function (DUF1131) SEEM42N_RS07320 PF04261 Dyp-type peroxidase family SEEM42N_RS07335 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS07340 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS07345 PF00005 ABC transporter SEEM42N_RS07350 PF00291 Pyridoxal-phosphate dependent enzyme SEEM42N_RS07355 PF00912 Transglycosylase SEEM42N_RS07360 PF17263 Family of unknown function (DUF5329) SEEM42N_RS07365 PF00117 Glutamine amidotransferase class-I SEEM42N_RS07370 PF00155 Aminotransferase class I and II SEEM42N_RS07370 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS07375 PF08543 Phosphomethylpyrimidine kinase SEEM42N_RS07385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SEEM42N_RS07390 PF05524 PEP-utilising enzyme, N-terminal SEEM42N_RS07390 PF00391 PEP-utilising enzyme, mobile domain SEEM42N_RS07390 PF02896 PEP-utilising enzyme, TIM barrel domain SEEM42N_RS07395 PF00381 PTS HPr component phosphorylation site SEEM42N_RS07400 PF00291 Pyridoxal-phosphate dependent enzyme SEEM42N_RS07410 PF04354 ZipA, C-terminal FtsZ-binding domain SEEM42N_RS07415 PF12826 Helix-hairpin-helix motif SEEM42N_RS07415 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SEEM42N_RS07415 PF03120 NAD-dependent DNA ligase OB-fold domain SEEM42N_RS07415 PF01653 NAD-dependent DNA ligase adenylation domain SEEM42N_RS07415 PF00533 BRCA1 C Terminus (BRCT) domain SEEM42N_RS07420 PF12843 Putative quorum-sensing-regulated virulence factor SEEM42N_RS07425 PF13593 SBF-like CPA transporter family (DUF4137) SEEM42N_RS07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS07430 PF03466 LysR substrate binding domain SEEM42N_RS07435 PF03502 Nucleoside-specific channel-forming protein, Tsx SEEM42N_RS07440 PF01048 Phosphorylase superfamily SEEM42N_RS07445 PF03825 Nucleoside H+ symporter SEEM42N_RS07455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS07455 PF03466 LysR substrate binding domain SEEM42N_RS07480 PF00749 tRNA synthetases class I (E and Q), catalytic domain SEEM42N_RS07485 PF07037 Putative transcription regulator (DUF1323) SEEM42N_RS07490 PF07037 Putative transcription regulator (DUF1323) SEEM42N_RS07505 PF00563 EAL domain SEEM42N_RS07505 PF05231 MASE1 SEEM42N_RS07510 PF01773 Na+ dependent nucleoside transporter N-terminus SEEM42N_RS07510 PF07662 Na+ dependent nucleoside transporter C-terminus SEEM42N_RS07510 PF07670 Nucleoside recognition SEEM42N_RS07515 PF01566 Natural resistance-associated macrophage protein SEEM42N_RS07520 PF10697 Protein of unknown function (DUF2502) SEEM42N_RS07525 PF00248 Aldo/keto reductase family SEEM42N_RS07530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEM42N_RS07530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEM42N_RS07530 PF00205 Thiamine pyrophosphate enzyme, central domain SEEM42N_RS07535 PF00654 Voltage gated chloride channel SEEM42N_RS07540 PF02685 Glucokinase SEEM42N_RS07545 PF00155 Aminotransferase class I and II SEEM42N_RS07555 PF03279 Bacterial lipid A biosynthesis acyltransferase SEEM42N_RS07560 PF10810 Protein of unknown function (DUF2545) SEEM42N_RS07565 PF07690 Major Facilitator Superfamily SEEM42N_RS07575 PF00672 HAMP domain SEEM42N_RS07575 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS07580 PF14532 Sigma-54 interaction domain SEEM42N_RS07580 PF00072 Response regulator receiver domain SEEM42N_RS07580 PF02954 Bacterial regulatory protein, Fis family SEEM42N_RS07585 PF01278 Omptin family SEEM42N_RS07615 PF01226 Formate/nitrite transporter SEEM42N_RS07620 PF04333 MlaA lipoprotein SEEM42N_RS07625 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SEEM42N_RS07630 PF04175 Protein of unknown function (DUF406) SEEM42N_RS07635 PF02803 Thiolase, C-terminal domain SEEM42N_RS07635 PF00108 Thiolase, N-terminal domain SEEM42N_RS07640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SEEM42N_RS07640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SEEM42N_RS07640 PF00378 Enoyl-CoA hydratase/isomerase SEEM42N_RS07645 PF00300 Histidine phosphatase superfamily (branch 1) SEEM42N_RS07650 PF01713 Smr domain SEEM42N_RS07655 PF05175 Methyltransferase small domain SEEM42N_RS07660 PF01264 Chorismate synthase SEEM42N_RS07665 PF03411 Penicillin-insensitive murein endopeptidase SEEM42N_RS07670 PF01925 Sulfite exporter TauE/SafE SEEM42N_RS07675 PF04315 Elongation factor P hydroxylase SEEM42N_RS07680 PF08891 YfcL protein SEEM42N_RS07685 PF01266 FAD dependent oxidoreductase SEEM42N_RS07685 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SEEM42N_RS07690 PF00109 Beta-ketoacyl synthase, N-terminal domain SEEM42N_RS07690 PF02801 Beta-ketoacyl synthase, C-terminal domain SEEM42N_RS07695 PF02517 CPBP intramembrane metalloprotease SEEM42N_RS07720 PF07690 Major Facilitator Superfamily SEEM42N_RS07730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SEEM42N_RS07730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SEEM42N_RS07730 PF11890 Domain of unknown function (DUF3410) SEEM42N_RS07735 PF01118 Semialdehyde dehydrogenase, NAD binding domain SEEM42N_RS07735 PF02774 Semialdehyde dehydrogenase, dimerisation domain SEEM42N_RS07740 PF01416 tRNA pseudouridine synthase SEEM42N_RS07745 PF09335 SNARE associated Golgi protein SEEM42N_RS07750 PF01039 Carboxyl transferase domain SEEM42N_RS07750 PF17848 Acetyl-coA carboxylase zinc finger domain SEEM42N_RS07755 PF08245 Mur ligase middle domain SEEM42N_RS07755 PF02875 Mur ligase family, glutamate ligase domain SEEM42N_RS07760 PF05036 Sporulation related domain SEEM42N_RS07770 PF02674 Colicin V production protein SEEM42N_RS07775 PF00156 Phosphoribosyl transferase domain SEEM42N_RS07780 PF13426 PAS domain SEEM42N_RS07780 PF02954 Bacterial regulatory protein, Fis family SEEM42N_RS07780 PF00158 Sigma-54 interaction domain SEEM42N_RS07785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SEEM42N_RS07785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SEEM42N_RS07790 PF13520 Amino acid permease SEEM42N_RS07795 PF01168 Alanine racemase, N-terminal domain SEEM42N_RS07800 PF00324 Amino acid permease SEEM42N_RS07805 PF02441 Flavoprotein SEEM42N_RS07810 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEM42N_RS07815 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEM42N_RS07820 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS07825 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS07830 PF00005 ABC transporter SEEM42N_RS07835 PF08338 Domain of unknown function (DUF1731) SEEM42N_RS07835 PF01370 NAD dependent epimerase/dehydratase family SEEM42N_RS07840 PF00043 Glutathione S-transferase, C-terminal domain SEEM42N_RS07840 PF02798 Glutathione S-transferase, N-terminal domain SEEM42N_RS07845 PF02798 Glutathione S-transferase, N-terminal domain SEEM42N_RS07845 PF14834 Glutathione S-transferase, C-terminal domain SEEM42N_RS07850 PF12850 Calcineurin-like phosphoesterase superfamily domain SEEM42N_RS07855 PF00293 NUDIX domain SEEM42N_RS07860 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS07865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEM42N_RS07875 PF03611 PTS system sugar-specific permease component SEEM42N_RS07880 PF00456 Transketolase, thiamine diphosphate binding domain SEEM42N_RS07885 PF02780 Transketolase, C-terminal domain SEEM42N_RS07885 PF02779 Transketolase, pyrimidine binding domain SEEM42N_RS07885 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SEEM42N_RS07890 PF03606 C4-dicarboxylate anaerobic carrier SEEM42N_RS07895 PF01515 Phosphate acetyl/butaryl transferase SEEM42N_RS07895 PF07085 DRTGG domain SEEM42N_RS07900 PF00871 Acetokinase family SEEM42N_RS07905 PF04217 Protein of unknown function, DUF412 SEEM42N_RS07910 PF03887 YfbU domain SEEM42N_RS07915 PF13419 Haloacid dehalogenase-like hydrolase SEEM42N_RS07920 PF03600 Citrate transporter SEEM42N_RS07920 PF02080 TrkA-C domain SEEM42N_RS07930 PF00155 Aminotransferase class I and II SEEM42N_RS07935 PF03466 LysR substrate binding domain SEEM42N_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS07945 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SEEM42N_RS07950 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SEEM42N_RS07955 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SEEM42N_RS07955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SEEM42N_RS07965 PF10531 SLBB domain SEEM42N_RS07965 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SEEM42N_RS07965 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SEEM42N_RS07970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEM42N_RS07970 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SEEM42N_RS07970 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS07970 PF00384 Molybdopterin oxidoreductase SEEM42N_RS07975 PF00146 NADH dehydrogenase SEEM42N_RS07980 PF12838 4Fe-4S dicluster domain SEEM42N_RS07985 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SEEM42N_RS07990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SEEM42N_RS07995 PF00361 Proton-conducting membrane transporter SEEM42N_RS07995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SEEM42N_RS08000 PF00361 Proton-conducting membrane transporter SEEM42N_RS08005 PF00361 Proton-conducting membrane transporter SEEM42N_RS08010 PF00072 Response regulator receiver domain SEEM42N_RS08010 PF01584 CheW-like domain SEEM42N_RS08015 PF12706 Beta-lactamase superfamily domain SEEM42N_RS08020 PF13673 Acetyltransferase (GNAT) domain SEEM42N_RS08025 PF05957 Bacterial protein of unknown function (DUF883) SEEM42N_RS08030 PF00425 chorismate binding enzyme SEEM42N_RS08035 PF16582 Middle domain of thiamine pyrophosphate SEEM42N_RS08035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEM42N_RS08035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEM42N_RS08040 PF12697 Alpha/beta hydrolase family SEEM42N_RS08045 PF00378 Enoyl-CoA hydratase/isomerase SEEM42N_RS08050 PF13378 Enolase C-terminal domain-like SEEM42N_RS08055 PF00501 AMP-binding enzyme SEEM42N_RS08055 PF13193 AMP-binding enzyme C-terminal domain SEEM42N_RS08070 PF00892 EamA-like transporter family SEEM42N_RS08075 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SEEM42N_RS08080 PF01522 Polysaccharide deacetylase SEEM42N_RS08085 PF02911 Formyl transferase, C-terminal domain SEEM42N_RS08085 PF01370 NAD dependent epimerase/dehydratase family SEEM42N_RS08085 PF00551 Formyl transferase SEEM42N_RS08090 PF00535 Glycosyl transferase family 2 SEEM42N_RS08095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SEEM42N_RS08100 PF00300 Histidine phosphatase superfamily (branch 1) SEEM42N_RS08105 PF00293 NUDIX domain SEEM42N_RS08110 PF07437 YfaZ precursor SEEM42N_RS08115 PF00994 Probable molybdopterin binding domain SEEM42N_RS08125 PF13183 4Fe-4S dicluster domain SEEM42N_RS08125 PF02754 Cysteine-rich domain SEEM42N_RS08130 PF00890 FAD binding domain SEEM42N_RS08135 PF01266 FAD dependent oxidoreductase SEEM42N_RS08135 PF04324 BFD-like [2Fe-2S] binding domain SEEM42N_RS08140 PF07690 Major Facilitator Superfamily SEEM42N_RS08145 PF03009 Glycerophosphoryl diester phosphodiesterase family SEEM42N_RS08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS08150 PF03466 LysR substrate binding domain SEEM42N_RS08155 PF07690 Major Facilitator Superfamily SEEM42N_RS08160 PF00111 2Fe-2S iron-sulfur cluster binding domain SEEM42N_RS08165 PF00268 Ribonucleotide reductase, small chain SEEM42N_RS08170 PF00317 Ribonucleotide reductase, all-alpha domain SEEM42N_RS08170 PF02867 Ribonucleotide reductase, barrel domain SEEM42N_RS08170 PF03477 ATP cone domain SEEM42N_RS08185 PF07690 Major Facilitator Superfamily SEEM42N_RS08190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEM42N_RS08190 PF13378 Enolase C-terminal domain-like SEEM42N_RS08195 PF00521 DNA gyrase/topoisomerase IV, subunit A SEEM42N_RS08195 PF03989 DNA gyrase C-terminal domain, beta-propeller SEEM42N_RS08200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS08200 PF00072 Response regulator receiver domain SEEM42N_RS08200 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS08200 PF09456 RcsC Alpha-Beta-Loop (ABL) SEEM42N_RS08205 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS08205 PF00072 Response regulator receiver domain SEEM42N_RS08210 PF01627 Hpt domain SEEM42N_RS08210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS08210 PF16359 RcsD-ABL domain SEEM42N_RS08215 PF00267 Gram-negative porin SEEM42N_RS08220 PF02424 ApbE family SEEM42N_RS08225 PF02805 Metal binding domain of Ada SEEM42N_RS08225 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SEEM42N_RS08225 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SEEM42N_RS08225 PF12833 Helix-turn-helix domain SEEM42N_RS08230 PF13532 2OG-Fe(II) oxygenase superfamily SEEM42N_RS08235 PF00005 ABC transporter SEEM42N_RS08240 PF03974 Ecotin SEEM42N_RS08245 PF12800 4Fe-4S binding domain SEEM42N_RS08245 PF13187 4Fe-4S dicluster domain SEEM42N_RS08245 PF00037 4Fe-4S binding domain SEEM42N_RS08250 PF03927 NapD protein SEEM42N_RS08255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEM42N_RS08255 PF00384 Molybdopterin oxidoreductase SEEM42N_RS08255 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS08260 PF12838 4Fe-4S dicluster domain SEEM42N_RS08260 PF12800 4Fe-4S binding domain SEEM42N_RS08265 PF12801 4Fe-4S binding domain SEEM42N_RS08265 PF13237 4Fe-4S dicluster domain SEEM42N_RS08270 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SEEM42N_RS08275 PF03264 NapC/NirT cytochrome c family, N-terminal region SEEM42N_RS08280 PF00005 ABC transporter SEEM42N_RS08285 PF03379 CcmB protein SEEM42N_RS08290 PF01578 Cytochrome C assembly protein SEEM42N_RS08295 PF04995 Heme exporter protein D (CcmD) SEEM42N_RS08300 PF03100 CcmE SEEM42N_RS08305 PF01578 Cytochrome C assembly protein SEEM42N_RS08305 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SEEM42N_RS08310 PF08534 Redoxin SEEM42N_RS08315 PF03918 Cytochrome C biogenesis protein SEEM42N_RS08320 PF00072 Response regulator receiver domain SEEM42N_RS08320 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS08340 PF00884 Sulfatase SEEM42N_RS08340 PF11893 Domain of unknown function (DUF3413) SEEM42N_RS08345 PF07208 Protein of unknown function (DUF1414) SEEM42N_RS08350 PF04245 37-kD nucleoid-associated bacterial protein SEEM42N_RS08355 PF01386 Ribosomal L25p family SEEM42N_RS08360 PF04851 Type III restriction enzyme, res subunit SEEM42N_RS08360 PF00271 Helicase conserved C-terminal domain SEEM42N_RS08365 PF01479 S4 domain SEEM42N_RS08365 PF00849 RNA pseudouridylate synthase SEEM42N_RS08370 PF07690 Major Facilitator Superfamily SEEM42N_RS08375 PF13989 YejG-like protein SEEM42N_RS08380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEM42N_RS08380 PF00005 ABC transporter SEEM42N_RS08385 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS08385 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEM42N_RS08390 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS08395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEM42N_RS08400 PF00563 EAL domain SEEM42N_RS08400 PF12792 CSS motif domain associated with EAL SEEM42N_RS08405 PF00877 NlpC/P60 family SEEM42N_RS08410 PF01569 PAP2 superfamily SEEM42N_RS08415 PF07683 Cobalamin synthesis protein cobW C-terminal domain SEEM42N_RS08415 PF02492 CobW/HypB/UreG, nucleotide-binding domain SEEM42N_RS08420 PF09285 Elongation factor P, C-terminal SEEM42N_RS08420 PF08207 Elongation factor P (EF-P) KOW-like domain SEEM42N_RS08420 PF01132 Elongation factor P (EF-P) OB domain SEEM42N_RS08425 PF03692 Putative zinc- or iron-chelating domain SEEM42N_RS08440 PF07690 Major Facilitator Superfamily SEEM42N_RS08445 PF00381 PTS HPr component phosphorylation site SEEM42N_RS08445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEM42N_RS08450 PF00294 pfkB family carbohydrate kinase SEEM42N_RS08455 PF02378 Phosphotransferase system, EIIC SEEM42N_RS08455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEM42N_RS08460 PF01261 Xylose isomerase-like TIM barrel SEEM42N_RS08465 PF03601 Conserved hypothetical protein 698 SEEM42N_RS08470 PF03466 LysR substrate binding domain SEEM42N_RS08470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS08475 PF00324 Amino acid permease SEEM42N_RS08480 PF00593 TonB dependent receptor SEEM42N_RS08480 PF07715 TonB-dependent Receptor Plug Domain SEEM42N_RS08485 PF07690 Major Facilitator Superfamily SEEM42N_RS08490 PF18429 Domain of unknown function (DUF5609) SEEM42N_RS08495 PF03313 Serine dehydratase alpha chain SEEM42N_RS08495 PF03315 Serine dehydratase beta chain SEEM42N_RS08505 PF00756 Putative esterase SEEM42N_RS08510 PF01227 GTP cyclohydrolase I SEEM42N_RS08515 PF04235 Protein of unknown function (DUF418) SEEM42N_RS08520 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS08525 PF13407 Periplasmic binding protein domain SEEM42N_RS08530 PF00005 ABC transporter SEEM42N_RS08535 PF02653 Branched-chain amino acid transport system / permease component SEEM42N_RS08540 PF01180 Dihydroorotate dehydrogenase SEEM42N_RS08545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SEEM42N_RS08545 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS08550 PF10808 Protein of unknown function (DUF2542) SEEM42N_RS08555 PF02698 DUF218 domain SEEM42N_RS08560 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region SEEM42N_RS08560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SEEM42N_RS08565 PF04172 LrgB-like family SEEM42N_RS08570 PF03788 LrgA family SEEM42N_RS08575 PF03466 LysR substrate binding domain SEEM42N_RS08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS08580 PF07690 Major Facilitator Superfamily SEEM42N_RS08585 PF07883 Cupin domain SEEM42N_RS08590 PF01557 Fumarylacetoacetate (FAA) hydrolase family SEEM42N_RS08595 PF02798 Glutathione S-transferase, N-terminal domain SEEM42N_RS08595 PF14497 Glutathione S-transferase, C-terminal domain SEEM42N_RS08600 PF01494 FAD binding domain SEEM42N_RS08605 PF01207 Dihydrouridine synthase (Dus) SEEM42N_RS08615 PF02321 Outer membrane efflux protein SEEM42N_RS08625 PF09335 SNARE associated Golgi protein SEEM42N_RS08630 PF04893 Yip1 domain SEEM42N_RS08635 PF00768 D-alanyl-D-alanine carboxypeptidase SEEM42N_RS08640 PF01565 FAD binding domain SEEM42N_RS08640 PF09330 D-lactate dehydrogenase, membrane binding SEEM42N_RS08645 PF00933 Glycosyl hydrolase family 3 N terminal domain SEEM42N_RS08645 PF14310 Fibronectin type III-like domain SEEM42N_RS08645 PF01915 Glycosyl hydrolase family 3 C-terminal domain SEEM42N_RS08650 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SEEM42N_RS08655 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS08660 PF00005 ABC transporter SEEM42N_RS08665 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS08675 PF13411 MerR HTH family regulatory protein SEEM42N_RS08680 PF07694 5TMR of 5TMR-LYT SEEM42N_RS08680 PF06580 Histidine kinase SEEM42N_RS08685 PF04397 LytTr DNA-binding domain SEEM42N_RS08685 PF00072 Response regulator receiver domain SEEM42N_RS08690 PF07308 Protein of unknown function (DUF1456) SEEM42N_RS08700 PF06998 Protein of unknown function (DUF1307) SEEM42N_RS08705 PF01588 Putative tRNA binding domain SEEM42N_RS08705 PF09334 tRNA synthetases class I (M) SEEM42N_RS08710 PF10609 NUBPL iron-transfer P-loop NTPase SEEM42N_RS08725 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS08725 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS08735 PF00419 Fimbrial protein SEEM42N_RS08740 PF11776 Nickel/cobalt transporter regulator SEEM42N_RS08750 PF02110 Hydroxyethylthiazole kinase family SEEM42N_RS08755 PF08543 Phosphomethylpyrimidine kinase SEEM42N_RS08760 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS08760 PF07702 UTRA domain SEEM42N_RS08765 PF00294 pfkB family carbohydrate kinase SEEM42N_RS08770 PF03747 ADP-ribosylglycohydrolase SEEM42N_RS08775 PF03825 Nucleoside H+ symporter SEEM42N_RS08780 PF01791 DeoC/LacD family aldolase SEEM42N_RS08785 PF00781 Diacylglycerol kinase catalytic domain SEEM42N_RS08795 PF05932 Tir chaperone protein (CesT) family SEEM42N_RS08825 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS08825 PF00072 Response regulator receiver domain SEEM42N_RS08830 PF00672 HAMP domain SEEM42N_RS08830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS08830 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS08835 PF07690 Major Facilitator Superfamily SEEM42N_RS08840 PF00873 AcrB/AcrD/AcrF family SEEM42N_RS08845 PF00873 AcrB/AcrD/AcrF family SEEM42N_RS08850 PF13533 Biotin-lipoyl like SEEM42N_RS08860 PF00012 Hsp70 protein SEEM42N_RS08865 PF00730 HhH-GPD superfamily base excision DNA repair protein SEEM42N_RS08865 PF06029 AlkA N-terminal domain SEEM42N_RS08870 PF08448 PAS fold SEEM42N_RS08870 PF00563 EAL domain SEEM42N_RS08870 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS08870 PF05231 MASE1 SEEM42N_RS08870 PF13426 PAS domain SEEM42N_RS08870 PF08447 PAS fold SEEM42N_RS08875 PF00485 Phosphoribulokinase / Uridine kinase family SEEM42N_RS08880 PF00692 dUTPase SEEM42N_RS08885 PF05170 AsmA family SEEM42N_RS08890 PF03471 Transporter associated domain SEEM42N_RS08890 PF03741 Integral membrane protein TerC family SEEM42N_RS08890 PF00571 CBS domain SEEM42N_RS08895 PF18412 Outer-membrane lipoprotein Wza C-terminal domain SEEM42N_RS08895 PF02563 Polysaccharide biosynthesis/export protein SEEM42N_RS08895 PF10531 SLBB domain SEEM42N_RS08900 PF01451 Low molecular weight phosphotyrosine protein phosphatase SEEM42N_RS08905 PF13614 AAA domain SEEM42N_RS08905 PF13807 G-rich domain on putative tyrosine kinase SEEM42N_RS08905 PF02706 Chain length determinant protein SEEM42N_RS08910 PF00535 Glycosyl transferase family 2 SEEM42N_RS08915 PF00132 Bacterial transferase hexapeptide (six repeats) SEEM42N_RS08920 PF13439 Glycosyltransferase Family 4 SEEM42N_RS08920 PF00534 Glycosyl transferases group 1 SEEM42N_RS08930 PF00535 Glycosyl transferase family 2 SEEM42N_RS08935 PF00132 Bacterial transferase hexapeptide (six repeats) SEEM42N_RS08940 PF16363 GDP-mannose 4,6 dehydratase SEEM42N_RS08945 PF01370 NAD dependent epimerase/dehydratase family SEEM42N_RS08950 PF00293 NUDIX domain SEEM42N_RS08955 PF00534 Glycosyl transferases group 1 SEEM42N_RS08955 PF13579 Glycosyl transferase 4-like domain SEEM42N_RS08960 PF00483 Nucleotidyl transferase SEEM42N_RS08960 PF01050 Mannose-6-phosphate isomerase SEEM42N_RS08965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SEEM42N_RS08965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SEEM42N_RS08965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SEEM42N_RS08965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SEEM42N_RS08970 PF02397 Bacterial sugar transferase SEEM42N_RS08980 PF04230 Polysaccharide pyruvyl transferase SEEM42N_RS08985 PF13439 Glycosyltransferase Family 4 SEEM42N_RS08985 PF00534 Glycosyl transferases group 1 SEEM42N_RS08995 PF00483 Nucleotidyl transferase SEEM42N_RS09010 PF09318 Glycosyl transferase 1 domain A SEEM42N_RS09010 PF00534 Glycosyl transferases group 1 SEEM42N_RS09020 PF01050 Mannose-6-phosphate isomerase SEEM42N_RS09020 PF00483 Nucleotidyl transferase SEEM42N_RS09025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SEEM42N_RS09025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SEEM42N_RS09025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SEEM42N_RS09025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SEEM42N_RS09035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SEEM42N_RS09035 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SEEM42N_RS09040 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SEEM42N_RS09040 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SEEM42N_RS09045 PF02706 Chain length determinant protein SEEM42N_RS09050 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SEEM42N_RS09050 PF01502 Phosphoribosyl-AMP cyclohydrolase SEEM42N_RS09055 PF00977 Histidine biosynthesis protein SEEM42N_RS09060 PF00977 Histidine biosynthesis protein SEEM42N_RS09065 PF00117 Glutamine amidotransferase class-I SEEM42N_RS09070 PF00475 Imidazoleglycerol-phosphate dehydratase SEEM42N_RS09075 PF00155 Aminotransferase class I and II SEEM42N_RS09080 PF00815 Histidinol dehydrogenase SEEM42N_RS09085 PF08029 HisG, C-terminal domain SEEM42N_RS09085 PF01634 ATP phosphoribosyltransferase SEEM42N_RS09095 PF01370 NAD dependent epimerase/dehydratase family SEEM42N_RS09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS09100 PF03466 LysR substrate binding domain SEEM42N_RS09110 PF13520 Amino acid permease SEEM42N_RS09115 PF00929 Exonuclease SEEM42N_RS09115 PF08411 Exonuclease C-terminal SEEM42N_RS09120 PF13979 SopA-like catalytic domain SEEM42N_RS09120 PF13599 Pentapeptide repeats (9 copies) SEEM42N_RS09120 PF13981 SopA-like central domain SEEM42N_RS09130 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS09130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEM42N_RS09130 PF00384 Molybdopterin oxidoreductase SEEM42N_RS09135 PF13247 4Fe-4S dicluster domain SEEM42N_RS09135 PF12800 4Fe-4S binding domain SEEM42N_RS09140 PF01292 Prokaryotic cytochrome b561 SEEM42N_RS09145 PF07943 Penicillin-binding protein 5, C-terminal domain SEEM42N_RS09145 PF00768 D-alanyl-D-alanine carboxypeptidase SEEM42N_RS09150 PF06445 GyrI-like small molecule binding domain SEEM42N_RS09155 PF04632 Fusaric acid resistance protein family SEEM42N_RS09160 PF04363 Protein of unknown function (DUF496) SEEM42N_RS09165 PF00288 GHMP kinases N terminal domain SEEM42N_RS09170 PF00871 Acetokinase family SEEM42N_RS09175 PF10662 Ethanolamine utilisation - propanediol utilisation SEEM42N_RS09180 PF00936 BMC domain SEEM42N_RS09190 PF10531 SLBB domain SEEM42N_RS09190 PF13237 4Fe-4S dicluster domain SEEM42N_RS09190 PF13375 RnfC Barrel sandwich hybrid domain SEEM42N_RS09190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SEEM42N_RS09195 PF00465 Iron-containing alcohol dehydrogenase SEEM42N_RS09195 PF00171 Aldehyde dehydrogenase family SEEM42N_RS09200 PF00171 Aldehyde dehydrogenase family SEEM42N_RS09205 PF01923 Cobalamin adenosyltransferase SEEM42N_RS09210 PF03319 Ethanolamine utilisation protein EutN/carboxysome SEEM42N_RS09220 PF06130 Phosphate propanoyltransferase SEEM42N_RS09225 PF00936 BMC domain SEEM42N_RS09230 PF00936 BMC domain SEEM42N_RS09240 PF18427 DD-reactivating factor swiveling domain SEEM42N_RS09240 PF08841 Diol dehydratase reactivase ATPase-like domain SEEM42N_RS09245 PF02287 Dehydratase small subunit SEEM42N_RS09250 PF02288 Dehydratase medium subunit SEEM42N_RS09255 PF02286 Dehydratase large subunit SEEM42N_RS09260 PF00936 BMC domain SEEM42N_RS09265 PF00936 BMC domain SEEM42N_RS09270 PF00230 Major intrinsic protein SEEM42N_RS09275 PF12833 Helix-turn-helix domain SEEM42N_RS09275 PF10114 Sensory domain found in PocR SEEM42N_RS09280 PF07685 CobB/CobQ-like glutamine amidotransferase domain SEEM42N_RS09280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SEEM42N_RS09285 PF03186 CobD/Cbib protein SEEM42N_RS09290 PF02570 Precorrin-8X methylmutase SEEM42N_RS09295 PF01888 CbiD SEEM42N_RS09300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEM42N_RS09305 PF05175 Methyltransferase small domain SEEM42N_RS09310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEM42N_RS09315 PF11760 Cobalamin synthesis G N-terminal SEEM42N_RS09315 PF01890 Cobalamin synthesis G C-terminus SEEM42N_RS09315 PF11761 Cobalamin biosynthesis central region SEEM42N_RS09320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEM42N_RS09325 PF02571 Precorrin-6x reductase CbiJ/CobK SEEM42N_RS09330 PF06180 Cobalt chelatase (CbiK) SEEM42N_RS09335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SEEM42N_RS09340 PF01891 Cobalt uptake substrate-specific transmembrane region SEEM42N_RS09345 PF02553 Cobalt transport protein component CbiN SEEM42N_RS09350 PF02361 Cobalt transport protein SEEM42N_RS09355 PF00005 ABC transporter SEEM42N_RS09360 PF07685 CobB/CobQ-like glutamine amidotransferase domain SEEM42N_RS09365 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SEEM42N_RS09370 PF02654 Cobalamin-5-phosphate synthase SEEM42N_RS09375 PF02277 Phosphoribosyltransferase SEEM42N_RS09380 PF03734 L,D-transpeptidase catalytic domain SEEM42N_RS09380 PF17969 L,D-transpeptidase C-terminal domain SEEM42N_RS09390 PF01797 Transposase IS200 like SEEM42N_RS09400 PF01022 Bacterial regulatory protein, arsR family SEEM42N_RS09405 PF01451 Low molecular weight phosphotyrosine protein phosphatase SEEM42N_RS09410 PF06953 Arsenical resistance operon trans-acting repressor ArsD SEEM42N_RS09415 PF02374 Anion-transporting ATPase SEEM42N_RS09420 PF01758 Sodium Bile acid symporter family SEEM42N_RS09435 PF01554 MatE SEEM42N_RS09460 PF01048 Phosphorylase superfamily SEEM42N_RS09460 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus SEEM42N_RS09480 PF06167 Glucose-regulated metallo-peptidase M90 SEEM42N_RS09495 PF00717 Peptidase S24-like SEEM42N_RS09500 PF13438 Domain of unknown function (DUF4113) SEEM42N_RS09500 PF00817 impB/mucB/samB family SEEM42N_RS09500 PF11799 impB/mucB/samB family C-terminal domain SEEM42N_RS09505 PF00313 'Cold-shock' DNA-binding domain SEEM42N_RS09515 PF00267 Gram-negative porin SEEM42N_RS09525 PF01966 HD domain SEEM42N_RS09530 PF00145 C-5 cytosine-specific DNA methylase SEEM42N_RS09530 PF18284 DNA methylase N-terminal domain SEEM42N_RS09535 PF03852 DNA mismatch endonuclease Vsr SEEM42N_RS09540 PF00892 EamA-like transporter family SEEM42N_RS09545 PF05661 Protein of unknown function (DUF808) SEEM42N_RS09550 PF09926 Uncharacterized small protein (DUF2158) SEEM42N_RS09555 PF17151 Periplasmic sensor domain SEEM42N_RS09555 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS09565 PF10733 Protein of unknown function (DUF2525) SEEM42N_RS09570 PF10781 Dextransucrase DSRB SEEM42N_RS09575 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS09580 PF01311 Bacterial export proteins, family 1 SEEM42N_RS09585 PF01313 Bacterial export proteins, family 3 SEEM42N_RS09590 PF00813 FliP family SEEM42N_RS09595 PF04347 Flagellar biosynthesis protein, FliO SEEM42N_RS09600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SEEM42N_RS09600 PF16973 Flagellar motor switch protein FliN N-terminal SEEM42N_RS09605 PF02154 Flagellar motor switch protein FliM SEEM42N_RS09605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SEEM42N_RS09610 PF03748 Flagellar basal body-associated protein FliL SEEM42N_RS09615 PF02120 Flagellar hook-length control protein FliK SEEM42N_RS09620 PF02050 Flagellar FliJ protein SEEM42N_RS09625 PF18269 T3SS EscN ATPase C-terminal domain SEEM42N_RS09625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEM42N_RS09630 PF02108 Flagellar assembly protein FliH SEEM42N_RS09635 PF01706 FliG C-terminal domain SEEM42N_RS09635 PF14841 FliG middle domain SEEM42N_RS09635 PF14842 FliG N-terminal domain SEEM42N_RS09640 PF01514 Secretory protein of YscJ/FliF family SEEM42N_RS09640 PF08345 Flagellar M-ring protein C-terminal SEEM42N_RS09645 PF02049 Flagellar hook-basal body complex protein FliE SEEM42N_RS09655 PF01206 Sulfurtransferase TusA SEEM42N_RS09660 PF04143 Sulphur transport SEEM42N_RS09665 PF13987 YedD-like protein SEEM42N_RS09670 PF00128 Alpha amylase, catalytic domain SEEM42N_RS09670 PF02806 Alpha amylase, C-terminal all-beta domain SEEM42N_RS09675 PF05400 Flagellar protein FliT SEEM42N_RS09680 PF02561 Flagellar protein FliS SEEM42N_RS09685 PF02465 Flagellar hook-associated protein 2 N-terminus SEEM42N_RS09685 PF07195 Flagellar hook-associated protein 2 C-terminus SEEM42N_RS09685 PF07196 Flagellin hook IN motif SEEM42N_RS09695 PF00700 Bacterial flagellin C-terminal helical region SEEM42N_RS09695 PF00669 Bacterial flagellin N-terminal helical region SEEM42N_RS09705 PF04542 Sigma-70 region 2 SEEM42N_RS09705 PF04545 Sigma-70, region 4 SEEM42N_RS09705 PF04539 Sigma-70 region 3 SEEM42N_RS09710 PF02899 Phage integrase, N-terminal SAM-like domain SEEM42N_RS09720 PF00291 Pyridoxal-phosphate dependent enzyme SEEM42N_RS09735 PF03472 Autoinducer binding domain SEEM42N_RS09735 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS09740 PF10769 Protein of unknown function (DUF2594) SEEM42N_RS09750 PF00072 Response regulator receiver domain SEEM42N_RS09750 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS09755 PF02151 UvrB/uvrC motif SEEM42N_RS09755 PF01541 GIY-YIG catalytic domain SEEM42N_RS09755 PF08459 UvrC Helix-hairpin-helix N-terminal SEEM42N_RS09760 PF01066 CDP-alcohol phosphatidyltransferase SEEM42N_RS09795 PF02810 SEC-C motif SEEM42N_RS09795 PF03695 Uncharacterised protein family (UPF0149) SEEM42N_RS09800 PF03222 Tryptophan/tyrosine permease family SEEM42N_RS09805 PF10678 Protein of unknown function (DUF2492) SEEM42N_RS09810 PF00210 Ferritin-like domain SEEM42N_RS09815 PF13992 YecR-like lipoprotein SEEM42N_RS09825 PF00210 Ferritin-like domain SEEM42N_RS09840 PF02358 Trehalose-phosphatase SEEM42N_RS09845 PF00982 Glycosyltransferase family 20 SEEM42N_RS09850 PF00582 Universal stress protein family SEEM42N_RS09860 PF05247 Flagellar transcriptional activator (FlhD) SEEM42N_RS09865 PF05280 Flagellar transcriptional activator (FlhC) SEEM42N_RS09870 PF01618 MotA/TolQ/ExbB proton channel family SEEM42N_RS09875 PF00691 OmpA family SEEM42N_RS09875 PF13677 Membrane MotB of proton-channel complex MotA/MotB SEEM42N_RS09880 PF01627 Hpt domain SEEM42N_RS09880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS09880 PF02895 Signal transducing histidine kinase, homodimeric domain SEEM42N_RS09880 PF01584 CheW-like domain SEEM42N_RS09880 PF09078 CheY binding SEEM42N_RS09885 PF01584 CheW-like domain SEEM42N_RS09890 PF00672 HAMP domain SEEM42N_RS09890 PF02203 Tar ligand binding domain homologue SEEM42N_RS09890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEM42N_RS09895 PF01739 CheR methyltransferase, SAM binding domain SEEM42N_RS09895 PF03705 CheR methyltransferase, all-alpha domain SEEM42N_RS09900 PF00072 Response regulator receiver domain SEEM42N_RS09900 PF01339 CheB methylesterase SEEM42N_RS09905 PF00072 Response regulator receiver domain SEEM42N_RS09910 PF04344 Chemotaxis phosphatase, CheZ SEEM42N_RS09915 PF01312 FlhB HrpN YscU SpaS Family SEEM42N_RS09920 PF00771 FHIPEP family SEEM42N_RS09925 PF06366 Flagellar protein FlhE SEEM42N_RS09930 PF07470 Glycosyl Hydrolase Family 88 SEEM42N_RS09935 PF00905 Penicillin binding protein transpeptidase domain SEEM42N_RS09935 PF03717 Penicillin-binding Protein dimerisation domain SEEM42N_RS09940 PF05746 DALR anticodon binding domain SEEM42N_RS09940 PF00750 tRNA synthetases class I (R) SEEM42N_RS09940 PF03485 Arginyl tRNA synthetase N terminal domain SEEM42N_RS09945 PF06185 YecM protein SEEM42N_RS09950 PF03932 CutC family SEEM42N_RS09955 PF08003 Protein of unknown function (DUF1698) SEEM42N_RS09960 PF13649 Methyltransferase domain SEEM42N_RS09965 PF01124 MAPEG family SEEM42N_RS09970 PF01904 Protein of unknown function DUF72 SEEM42N_RS09975 PF00857 Isochorismatase family SEEM42N_RS09980 PF01336 OB-fold nucleic acid binding domain SEEM42N_RS09980 PF00152 tRNA synthetases class II (D, K and N) SEEM42N_RS09980 PF02938 GAD domain SEEM42N_RS09985 PF00293 NUDIX domain SEEM42N_RS09990 PF01709 Transcriptional regulator SEEM42N_RS09995 PF02075 Crossover junction endodeoxyribonuclease RuvC SEEM42N_RS10000 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SEEM42N_RS10010 PF01330 RuvA N terminal domain SEEM42N_RS10010 PF07499 RuvA, C-terminal domain SEEM42N_RS10015 PF05496 Holliday junction DNA helicase RuvB P-loop domain SEEM42N_RS10015 PF05491 RuvB C-terminal winged helix domain SEEM42N_RS10015 PF17864 RuvB AAA lid domain SEEM42N_RS10020 PF00950 ABC 3 transport family SEEM42N_RS10025 PF00005 ABC transporter SEEM42N_RS10030 PF01297 Zinc-uptake complex component A periplasmic SEEM42N_RS10035 PF01551 Peptidase family M23 SEEM42N_RS10035 PF01476 LysM domain SEEM42N_RS10035 PF08525 Opacity-associated protein A N-terminal motif SEEM42N_RS10040 PF03279 Bacterial lipid A biosynthesis acyltransferase SEEM42N_RS10045 PF02887 Pyruvate kinase, alpha/beta domain SEEM42N_RS10045 PF00224 Pyruvate kinase, barrel domain SEEM42N_RS10050 PF01418 Helix-turn-helix domain, rpiR family SEEM42N_RS10050 PF01380 SIS domain SEEM42N_RS10055 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SEEM42N_RS10055 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SEEM42N_RS10060 PF00920 Dehydratase family SEEM42N_RS10065 PF01081 KDPG and KHG aldolase SEEM42N_RS10070 PF02222 ATP-grasp domain SEEM42N_RS10075 PF07130 YebG protein SEEM42N_RS10080 PF13995 YebF-like protein SEEM42N_RS10085 PF04391 Protein of unknown function (DUF533) SEEM42N_RS10090 PF00326 Prolyl oligopeptidase family SEEM42N_RS10090 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SEEM42N_RS10095 PF00929 Exonuclease SEEM42N_RS10100 PF00795 Carbon-nitrogen hydrolase SEEM42N_RS10105 PF06440 DNA polymerase III, theta subunit SEEM42N_RS10110 PF04234 CopC domain SEEM42N_RS10115 PF05425 Copper resistance protein D SEEM42N_RS10120 PF10709 Protein of unknown function (DUF2511) SEEM42N_RS10135 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SEEM42N_RS10175 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain SEEM42N_RS10175 PF00589 Phage integrase family SEEM42N_RS10190 PF00563 EAL domain SEEM42N_RS10190 PF01590 GAF domain SEEM42N_RS10190 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS10190 PF00360 Phytochrome region SEEM42N_RS10195 PF00753 Metallo-beta-lactamase superfamily SEEM42N_RS10195 PF14863 Alkyl sulfatase dimerisation SEEM42N_RS10195 PF14864 Alkyl sulfatase C-terminal SEEM42N_RS10225 PF00892 EamA-like transporter family SEEM42N_RS10250 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS10260 PF07166 Protein of unknown function (DUF1398) SEEM42N_RS10265 PF05364 Salmonella type III secretion SopE effector N-terminus SEEM42N_RS10265 PF07487 SopE GEF domain SEEM42N_RS10275 PF00149 Calcineurin-like phosphoesterase SEEM42N_RS10280 PF07358 Protein of unknown function (DUF1482) SEEM42N_RS10285 PF07351 Protein of unknown function (DUF1480) SEEM42N_RS10290 PF01189 16S rRNA methyltransferase RsmB/F SEEM42N_RS10290 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SEEM42N_RS10290 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SEEM42N_RS10295 PF02470 MlaD protein SEEM42N_RS10300 PF04403 Paraquat-inducible protein A SEEM42N_RS10305 PF13185 GAF domain SEEM42N_RS10310 PF04352 ProQ/FINO family SEEM42N_RS10310 PF17516 ProQ C-terminal domain SEEM42N_RS10315 PF11818 C-terminal domain of tail specific protease (DUF3340) SEEM42N_RS10315 PF17804 Tail specific protease N-terminal domain SEEM42N_RS10315 PF03572 Peptidase family S41 SEEM42N_RS10315 PF00595 PDZ domain SEEM42N_RS10320 PF01435 Peptidase family M48 SEEM42N_RS10325 PF07690 Major Facilitator Superfamily SEEM42N_RS10330 PF09339 IclR helix-turn-helix domain SEEM42N_RS10330 PF01614 Bacterial transcriptional regulator SEEM42N_RS10335 PF13996 YobH-like protein SEEM42N_RS10340 PF13998 MgrB protein SEEM42N_RS10345 PF13974 YebO-like protein SEEM42N_RS10350 PF10736 Protein of unknown function (DUF2627) SEEM42N_RS10355 PF00313 'Cold-shock' DNA-binding domain SEEM42N_RS10360 PF00905 Penicillin binding protein transpeptidase domain SEEM42N_RS10360 PF03717 Penicillin-binding Protein dimerisation domain SEEM42N_RS10365 PF13847 Methyltransferase domain SEEM42N_RS10370 PF02659 Putative manganese efflux pump SEEM42N_RS10375 PF06173 Protein of unknown function (DUF986) SEEM42N_RS10380 PF03613 PTS system mannose/fructose/sorbose family IID component SEEM42N_RS10385 PF03609 PTS system sorbose-specific iic component SEEM42N_RS10390 PF03610 PTS system fructose IIA component SEEM42N_RS10390 PF03830 PTS system sorbose subfamily IIB component SEEM42N_RS10395 PF03471 Transporter associated domain SEEM42N_RS10395 PF03741 Integral membrane protein TerC family SEEM42N_RS10400 PF12792 CSS motif domain associated with EAL SEEM42N_RS10400 PF00563 EAL domain SEEM42N_RS10405 PF03315 Serine dehydratase beta chain SEEM42N_RS10405 PF03313 Serine dehydratase alpha chain SEEM42N_RS10410 PF00293 NUDIX domain SEEM42N_RS10415 PF04715 Anthranilate synthase component I, N terminal region SEEM42N_RS10415 PF00425 chorismate binding enzyme SEEM42N_RS10420 PF03701 Uncharacterised protein family (UPF0181) SEEM42N_RS10425 PF01042 Endoribonuclease L-PSP SEEM42N_RS10430 PF04851 Type III restriction enzyme, res subunit SEEM42N_RS10430 PF13307 Helicase C-terminal domain SEEM42N_RS10435 PF00814 Glycoprotease family SEEM42N_RS10440 PF03843 Outer membrane lipoprotein Slp family SEEM42N_RS10445 PF13193 AMP-binding enzyme C-terminal domain SEEM42N_RS10445 PF00501 AMP-binding enzyme SEEM42N_RS10450 PF00570 HRDC domain SEEM42N_RS10450 PF01612 3'-5' exonuclease SEEM42N_RS10455 PF03776 Septum formation topological specificity factor MinE SEEM42N_RS10460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SEEM42N_RS10465 PF03775 Septum formation inhibitor MinC, C-terminal domain SEEM42N_RS10465 PF05209 Septum formation inhibitor MinC, N-terminal domain SEEM42N_RS10470 PF05166 YcgL domain SEEM42N_RS10475 PF01557 Fumarylacetoacetate (FAA) hydrolase family SEEM42N_RS10480 PF03692 Putative zinc- or iron-chelating domain SEEM42N_RS10490 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system SEEM42N_RS10500 PF02600 Disulfide bond formation protein DsbB SEEM42N_RS10505 PF06450 Bacterial Na+/H+ antiporter B (NhaB) SEEM42N_RS10510 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS10510 PF07840 FadR C-terminal domain SEEM42N_RS10515 PF04293 SpoVR like protein SEEM42N_RS10520 PF01266 FAD dependent oxidoreductase SEEM42N_RS10525 PF00842 Alanine racemase, C-terminal domain SEEM42N_RS10525 PF01168 Alanine racemase, N-terminal domain SEEM42N_RS10530 PF03471 Transporter associated domain SEEM42N_RS10530 PF02080 TrkA-C domain SEEM42N_RS10530 PF00999 Sodium/hydrogen exchanger family SEEM42N_RS10535 PF17676 LD-carboxypeptidase C-terminal domain SEEM42N_RS10535 PF02016 LD-carboxypeptidase N-terminal domain SEEM42N_RS10540 PF01464 Transglycosylase SLT domain SEEM42N_RS10545 PF07238 PilZ domain SEEM42N_RS10545 PF07317 Flagellar regulator YcgR SEEM42N_RS10550 PF04226 Transglycosylase associated protein SEEM42N_RS10555 PF01204 Trehalase SEEM42N_RS10560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SEEM42N_RS10560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SEEM42N_RS10565 PF08173 Membrane bound YbgT-like protein SEEM42N_RS10570 PF02322 Cytochrome bd terminal oxidase subunit II SEEM42N_RS10575 PF01654 Cytochrome bd terminal oxidase subunit I SEEM42N_RS10580 PF04809 HupH hydrogenase expression protein, C-terminal conserved region SEEM42N_RS10585 PF07449 Hydrogenase-1 expression protein HyaE SEEM42N_RS10590 PF01750 Hydrogenase maturation protease SEEM42N_RS10595 PF01292 Prokaryotic cytochrome b561 SEEM42N_RS10600 PF00374 Nickel-dependent hydrogenase SEEM42N_RS10605 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SEEM42N_RS10605 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SEEM42N_RS10615 PF06071 Protein of unknown function (DUF933) SEEM42N_RS10615 PF01926 50S ribosome-binding GTPase SEEM42N_RS10620 PF01195 Peptidyl-tRNA hydrolase SEEM42N_RS10625 PF10762 Protein of unknown function (DUF2583) SEEM42N_RS10630 PF00916 Sulfate permease family SEEM42N_RS10630 PF01740 STAS domain SEEM42N_RS10635 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SEEM42N_RS10635 PF14572 Phosphoribosyl synthetase-associated domain SEEM42N_RS10640 PF00288 GHMP kinases N terminal domain SEEM42N_RS10640 PF08544 GHMP kinases C terminal SEEM42N_RS10645 PF03550 Outer membrane lipoprotein LolB SEEM42N_RS10650 PF01488 Shikimate / quinate 5-dehydrogenase SEEM42N_RS10650 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SEEM42N_RS10650 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SEEM42N_RS10655 PF00472 RF-1 domain SEEM42N_RS10655 PF03462 PCRF domain SEEM42N_RS10660 PF17827 PrmC N-terminal domain SEEM42N_RS10660 PF13847 Methyltransferase domain SEEM42N_RS10665 PF04247 Invasion gene expression up-regulator, SirB SEEM42N_RS10670 PF13369 Transglutaminase-like superfamily SEEM42N_RS10675 PF00793 DAHP synthetase I family SEEM42N_RS10685 PF01797 Transposase IS200 like SEEM42N_RS10690 PF01699 Sodium/calcium exchanger protein SEEM42N_RS10695 PF06150 ChaB SEEM42N_RS10700 PF02635 DsrE/DsrF-like family SEEM42N_RS10705 PF11924 Inverse autotransporter, beta-domain SEEM42N_RS10710 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS10710 PF00072 Response regulator receiver domain SEEM42N_RS10715 PF07730 Histidine kinase SEEM42N_RS10715 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SEEM42N_RS10715 PF00672 HAMP domain SEEM42N_RS10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS10720 PF07690 Major Facilitator Superfamily SEEM42N_RS10725 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS10725 PF00384 Molybdopterin oxidoreductase SEEM42N_RS10725 PF14710 Respiratory nitrate reductase alpha N-terminal SEEM42N_RS10730 PF14711 Respiratory nitrate reductase beta C-terminal SEEM42N_RS10730 PF13247 4Fe-4S dicluster domain SEEM42N_RS10735 PF02613 Nitrate reductase delta subunit SEEM42N_RS10740 PF02665 Nitrate reductase gamma subunit SEEM42N_RS10795 PF00551 Formyl transferase SEEM42N_RS10795 PF01842 ACT domain SEEM42N_RS10800 PF02810 SEC-C motif SEEM42N_RS10805 PF01734 Patatin-like phospholipase SEEM42N_RS10810 PF00072 Response regulator receiver domain SEEM42N_RS10815 PF00483 Nucleotidyl transferase SEEM42N_RS10820 PF00816 H-NS histone family SEEM42N_RS10825 PF00265 Thymidine kinase SEEM42N_RS10830 PF00465 Iron-containing alcohol dehydrogenase SEEM42N_RS10830 PF00171 Aldehyde dehydrogenase family SEEM42N_RS10835 PF01914 MarC family integral membrane protein SEEM42N_RS10840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEM42N_RS10845 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS10850 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS10850 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEM42N_RS10855 PF00005 ABC transporter SEEM42N_RS10855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEM42N_RS10860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEM42N_RS10860 PF00005 ABC transporter SEEM42N_RS10865 PF00027 Cyclic nucleotide-binding domain SEEM42N_RS10865 PF00520 Ion transport protein SEEM42N_RS10870 PF04269 Protein of unknown function, DUF440 SEEM42N_RS10875 PF13091 PLD-like domain SEEM42N_RS10875 PF13396 Phospholipase_D-nuclease N-terminal SEEM42N_RS10885 PF03795 YCII-related domain SEEM42N_RS10890 PF03544 Gram-negative bacterial TonB protein C-terminal SEEM42N_RS10895 PF03061 Thioesterase superfamily SEEM42N_RS10900 PF04279 Intracellular septation protein A SEEM42N_RS10910 PF03692 Putative zinc- or iron-chelating domain SEEM42N_RS10915 PF03922 OmpW family SEEM42N_RS10920 PF05067 Manganese containing catalase SEEM42N_RS10925 PF05974 Domain of unknown function (DUF892) SEEM42N_RS10930 PF05974 Domain of unknown function (DUF892) SEEM42N_RS10935 PF10685 Stress-induced bacterial acidophilic repeat motif SEEM42N_RS10940 PF00290 Tryptophan synthase alpha chain SEEM42N_RS10945 PF00291 Pyridoxal-phosphate dependent enzyme SEEM42N_RS10950 PF00218 Indole-3-glycerol phosphate synthase SEEM42N_RS10950 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SEEM42N_RS10955 PF00591 Glycosyl transferase family, a/b domain SEEM42N_RS10955 PF02885 Glycosyl transferase family, helical bundle domain SEEM42N_RS10955 PF00117 Glutamine amidotransferase class-I SEEM42N_RS10960 PF00425 chorismate binding enzyme SEEM42N_RS10960 PF04715 Anthranilate synthase component I, N terminal region SEEM42N_RS10965 PF08255 Trp-operon Leader Peptide SEEM42N_RS10970 PF02811 PHP domain SEEM42N_RS10975 PF01300 Telomere recombination SEEM42N_RS10980 PF00849 RNA pseudouridylate synthase SEEM42N_RS10980 PF01479 S4 domain SEEM42N_RS10985 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SEEM42N_RS10990 PF00106 short chain dehydrogenase SEEM42N_RS10995 PF08496 Peptidase family S49 N-terminal SEEM42N_RS10995 PF01343 Peptidase family S49 SEEM42N_RS11000 PF10692 Protein of unknown function (DUF2498) SEEM42N_RS11005 PF01396 Topoisomerase DNA binding C4 zinc finger SEEM42N_RS11005 PF08272 Topoisomerase I zinc-ribbon-like SEEM42N_RS11005 PF01131 DNA topoisomerase SEEM42N_RS11005 PF01751 Toprim domain SEEM42N_RS11010 PF03466 LysR substrate binding domain SEEM42N_RS11010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS11025 PF00694 Aconitase C-terminal domain SEEM42N_RS11025 PF00330 Aconitase family (aconitate hydratase) SEEM42N_RS11030 PF00925 GTP cyclohydrolase II SEEM42N_RS11035 PF01569 PAP2 superfamily SEEM42N_RS11040 PF06305 Lipopolysaccharide assembly protein A domain SEEM42N_RS11045 PF18073 Rubredoxin metal binding domain SEEM42N_RS11050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SEEM42N_RS11055 PF01253 Translation initiation factor SUI1 SEEM42N_RS11060 PF05433 Glycine zipper 2TM domain SEEM42N_RS11065 PF00455 DeoR C terminal sensor domain SEEM42N_RS11065 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS11075 PF13426 PAS domain SEEM42N_RS11075 PF00563 EAL domain SEEM42N_RS11075 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS11080 PF17876 Cold shock domain SEEM42N_RS11080 PF00575 S1 RNA binding domain SEEM42N_RS11080 PF00773 RNB domain SEEM42N_RS11080 PF08206 Ribonuclease B OB domain SEEM42N_RS11115 PF00005 ABC transporter SEEM42N_RS11120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEM42N_RS11120 PF00005 ABC transporter SEEM42N_RS11125 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEM42N_RS11125 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS11170 PF02796 Helix-turn-helix domain of resolvase SEEM42N_RS11170 PF00239 Resolvase, N terminal domain SEEM42N_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS11180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEM42N_RS11185 PF00158 Sigma-54 interaction domain SEEM42N_RS11185 PF02954 Bacterial regulatory protein, Fis family SEEM42N_RS11190 PF04012 PspA/IM30 family SEEM42N_RS11195 PF06667 Phage shock protein B SEEM42N_RS11200 PF04024 PspC domain SEEM42N_RS11205 PF09584 Phage shock protein PspD (Phageshock_PspD) SEEM42N_RS11210 PF00581 Rhodanese-like domain SEEM42N_RS11215 PF04317 YcjX-like family, DUF463 SEEM42N_RS11220 PF05128 Domain of unknown function (DUF697) SEEM42N_RS11225 PF18024 Helix-turn-helix domain SEEM42N_RS11225 PF00158 Sigma-54 interaction domain SEEM42N_RS11230 PF08534 Redoxin SEEM42N_RS11235 PF13378 Enolase C-terminal domain-like SEEM42N_RS11235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEM42N_RS11240 PF00246 Zinc carboxypeptidase SEEM42N_RS11245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEM42N_RS11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS11255 PF03466 LysR substrate binding domain SEEM42N_RS11260 PF00248 Aldo/keto reductase family SEEM42N_RS11270 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS11285 PF12833 Helix-turn-helix domain SEEM42N_RS11285 PF06445 GyrI-like small molecule binding domain SEEM42N_RS11305 PF08534 Redoxin SEEM42N_RS11325 PF00924 Mechanosensitive ion channel SEEM42N_RS11330 PF10749 Protein of unknown function (DUF2534) SEEM42N_RS11335 PF00582 Universal stress protein family SEEM42N_RS11340 PF00027 Cyclic nucleotide-binding domain SEEM42N_RS11340 PF13545 Crp-like helix-turn-helix domain SEEM42N_RS11345 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SEEM42N_RS11345 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SEEM42N_RS11350 PF01713 Smr domain SEEM42N_RS11355 PF00672 HAMP domain SEEM42N_RS11355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEM42N_RS11355 PF02203 Tar ligand binding domain homologue SEEM42N_RS11360 PF01544 CorA-like Mg2+ transporter protein SEEM42N_RS11365 PF00270 DEAD/DEAH box helicase SEEM42N_RS11365 PF03880 DbpA RNA binding domain SEEM42N_RS11365 PF00271 Helicase conserved C-terminal domain SEEM42N_RS11370 PF01171 PP-loop family SEEM42N_RS11385 PF00893 Small Multidrug Resistance protein SEEM42N_RS11390 PF00582 Universal stress protein family SEEM42N_RS11395 PF10371 Domain of unknown function SEEM42N_RS11395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEM42N_RS11395 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SEEM42N_RS11395 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SEEM42N_RS11395 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SEEM42N_RS11405 PF03891 Domain of unknown function (DUF333) SEEM42N_RS11410 PF03724 META domain SEEM42N_RS11415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SEEM42N_RS11415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SEEM42N_RS11420 PF11739 Dicarboxylate transport SEEM42N_RS11425 PF13617 YnbE-like lipoprotein SEEM42N_RS11430 PF07027 Protein of unknown function (DUF1318) SEEM42N_RS11440 PF02525 Flavodoxin-like fold SEEM42N_RS11445 PF04408 Helicase associated domain (HA2) SEEM42N_RS11445 PF11898 Domain of unknown function (DUF3418) SEEM42N_RS11445 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SEEM42N_RS11445 PF00270 DEAD/DEAH box helicase SEEM42N_RS11445 PF00271 Helicase conserved C-terminal domain SEEM42N_RS11450 PF02698 DUF218 domain SEEM42N_RS11455 PF01292 Prokaryotic cytochrome b561 SEEM42N_RS11460 PF08242 Methyltransferase domain SEEM42N_RS11470 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS11475 PF00005 ABC transporter SEEM42N_RS11480 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS11485 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEM42N_RS11495 PF00657 GDSL-like Lipase/Acylhydrolase SEEM42N_RS11495 PF06767 Sif protein SEEM42N_RS11510 PF02583 Metal-sensitive transcriptional repressor SEEM42N_RS11515 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS11515 PF00107 Zinc-binding dehydrogenase SEEM42N_RS11520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEM42N_RS11520 PF00672 HAMP domain SEEM42N_RS11520 PF02203 Tar ligand binding domain homologue SEEM42N_RS11525 PF03466 LysR substrate binding domain SEEM42N_RS11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS11530 PF07063 Domain of unknown function (DUF1338) SEEM42N_RS11535 PF00135 Carboxylesterase family SEEM42N_RS11540 PF04349 Periplasmic glucan biosynthesis protein, MdoG SEEM42N_RS11545 PF04264 YceI-like domain SEEM42N_RS11550 PF01070 FMN-dependent dehydrogenase SEEM42N_RS11555 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS11560 PF00455 DeoR C terminal sensor domain SEEM42N_RS11560 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS11565 PF00834 Ribulose-phosphate 3 epimerase family SEEM42N_RS11570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEM42N_RS11575 PF03437 BtpA family SEEM42N_RS11580 PF03611 PTS system sugar-specific permease component SEEM42N_RS11585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEM42N_RS11590 PF05343 M42 glutamyl aminopeptidase SEEM42N_RS11595 PF13302 Acetyltransferase (GNAT) domain SEEM42N_RS11600 PF18836 Beta solenoid repeat from YDCK SEEM42N_RS11605 PF03595 Voltage-dependent anion channel SEEM42N_RS11610 PF03848 Tellurite resistance protein TehB SEEM42N_RS11615 PF11769 Protein of unknown function (DUF3313) SEEM42N_RS11620 PF03594 Benzoate membrane transport protein SEEM42N_RS11625 PF01381 Helix-turn-helix SEEM42N_RS11625 PF07883 Cupin domain SEEM42N_RS11630 PF01136 Peptidase family U32 SEEM42N_RS11630 PF12392 Collagenase SEEM42N_RS11635 PF10829 Protein of unknown function (DUF2554) SEEM42N_RS11640 PF06767 Sif protein SEEM42N_RS11655 PF01427 D-ala-D-ala dipeptidase SEEM42N_RS11660 PF00155 Aminotransferase class I and II SEEM42N_RS11660 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS11665 PF00171 Aldehyde dehydrogenase family SEEM42N_RS11675 PF10753 Toxin GhoT_OrtT SEEM42N_RS11695 PF10735 Protein of unknown function (DUF2526) SEEM42N_RS11700 PF04657 Putative inner membrane exporter, YdcZ SEEM42N_RS11710 PF00107 Zinc-binding dehydrogenase SEEM42N_RS11710 PF16884 N-terminal domain of oxidoreductase SEEM42N_RS11715 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS11715 PF07729 FCD domain SEEM42N_RS11720 PF00593 TonB dependent receptor SEEM42N_RS11720 PF07715 TonB-dependent Receptor Plug Domain SEEM42N_RS11730 PF06004 Bacterial protein of unknown function (DUF903) SEEM42N_RS11735 PF00324 Amino acid permease SEEM42N_RS11745 PF00797 N-acetyltransferase SEEM42N_RS11750 PF02567 Phenazine biosynthesis-like protein SEEM42N_RS11755 PF02665 Nitrate reductase gamma subunit SEEM42N_RS11760 PF02613 Nitrate reductase delta subunit SEEM42N_RS11765 PF14711 Respiratory nitrate reductase beta C-terminal SEEM42N_RS11765 PF13247 4Fe-4S dicluster domain SEEM42N_RS11770 PF14710 Respiratory nitrate reductase alpha N-terminal SEEM42N_RS11770 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS11770 PF00384 Molybdopterin oxidoreductase SEEM42N_RS11775 PF07690 Major Facilitator Superfamily SEEM42N_RS11780 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS11785 PF07690 Major Facilitator Superfamily SEEM42N_RS11795 PF00267 Gram-negative porin SEEM42N_RS11800 PF00892 EamA-like transporter family SEEM42N_RS11810 PF12800 4Fe-4S binding domain SEEM42N_RS11810 PF09163 Formate dehydrogenase N, transmembrane SEEM42N_RS11810 PF13247 4Fe-4S dicluster domain SEEM42N_RS11815 PF01292 Prokaryotic cytochrome b561 SEEM42N_RS11820 PF00107 Zinc-binding dehydrogenase SEEM42N_RS11820 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS11825 PF03949 Malic enzyme, NAD binding domain SEEM42N_RS11825 PF00390 Malic enzyme, N-terminal domain SEEM42N_RS11830 PF08136 30S ribosomal protein subunit S22 family SEEM42N_RS11835 PF10684 Putative biofilm-dependent modulation protein SEEM42N_RS11840 PF02566 OsmC-like protein SEEM42N_RS11845 PF06109 Haemolysin E (HlyE) SEEM42N_RS11860 PF06411 HdeA/HdeB family SEEM42N_RS11870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SEEM42N_RS11870 PF11941 Domain of unknown function (DUF3459) SEEM42N_RS11870 PF00128 Alpha amylase, catalytic domain SEEM42N_RS11875 PF00128 Alpha amylase, catalytic domain SEEM42N_RS11880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SEEM42N_RS11880 PF00128 Alpha amylase, catalytic domain SEEM42N_RS11885 PF00155 Aminotransferase class I and II SEEM42N_RS11890 PF03553 Na+/H+ antiporter family SEEM42N_RS11895 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS11905 PF03060 Nitronate monooxygenase SEEM42N_RS11910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS11910 PF03466 LysR substrate binding domain SEEM42N_RS11945 PF02547 Queuosine biosynthesis protein SEEM42N_RS11955 PF01494 FAD binding domain SEEM42N_RS11960 PF07690 Major Facilitator Superfamily SEEM42N_RS11970 PF07690 Major Facilitator Superfamily SEEM42N_RS11975 PF00107 Zinc-binding dehydrogenase SEEM42N_RS11975 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS11980 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS11980 PF07729 FCD domain SEEM42N_RS11990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SEEM42N_RS11990 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SEEM42N_RS11995 PF00374 Nickel-dependent hydrogenase SEEM42N_RS12000 PF01292 Prokaryotic cytochrome b561 SEEM42N_RS12005 PF01750 Hydrogenase maturation protease SEEM42N_RS12010 PF01455 HupF/HypC family SEEM42N_RS12020 PF04809 HupH hydrogenase expression protein, C-terminal conserved region SEEM42N_RS12030 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SEEM42N_RS12035 PF00267 Gram-negative porin SEEM42N_RS12045 PF01062 Bestrophin, RFP-TM, chloride channel SEEM42N_RS12050 PF13811 Domain of unknown function (DUF4186) SEEM42N_RS12055 PF04960 Glutaminase SEEM42N_RS12060 PF00171 Aldehyde dehydrogenase family SEEM42N_RS12065 PF03466 LysR substrate binding domain SEEM42N_RS12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS12070 PF07690 Major Facilitator Superfamily SEEM42N_RS12075 PF01914 MarC family integral membrane protein SEEM42N_RS12080 PF01047 MarR family SEEM42N_RS12085 PF12833 Helix-turn-helix domain SEEM42N_RS12090 PF13999 MarB protein SEEM42N_RS12095 PF00892 EamA-like transporter family SEEM42N_RS12100 PF07690 Major Facilitator Superfamily SEEM42N_RS12110 PF04076 Bacterial OB fold (BOF) protein SEEM42N_RS12115 PF02464 Competence-damaged protein SEEM42N_RS12120 PF10685 Stress-induced bacterial acidophilic repeat motif SEEM42N_RS12125 PF01432 Peptidase family M3 SEEM42N_RS12130 PF00106 short chain dehydrogenase SEEM42N_RS12135 PF07729 FCD domain SEEM42N_RS12135 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS12140 PF14001 YdfZ protein SEEM42N_RS12145 PF08125 Mannitol dehydrogenase C-terminal domain SEEM42N_RS12145 PF01232 Mannitol dehydrogenase Rossmann domain SEEM42N_RS12150 PF00083 Sugar (and other) transporter SEEM42N_RS12150 PF07690 Major Facilitator Superfamily SEEM42N_RS12155 PF00107 Zinc-binding dehydrogenase SEEM42N_RS12155 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS12160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SEEM42N_RS12160 PF13378 Enolase C-terminal domain-like SEEM42N_RS12165 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SEEM42N_RS12170 PF06932 Protein of unknown function (DUF1283) SEEM42N_RS12175 PF13302 Acetyltransferase (GNAT) domain SEEM42N_RS12180 PF06788 Uncharacterised protein family (UPF0257) SEEM42N_RS12185 PF06649 Protein of unknown function (DUF1161) SEEM42N_RS12190 PF00384 Molybdopterin oxidoreductase SEEM42N_RS12190 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS12190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEM42N_RS12195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEM42N_RS12195 PF00384 Molybdopterin oxidoreductase SEEM42N_RS12195 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS12200 PF13247 4Fe-4S dicluster domain SEEM42N_RS12200 PF12800 4Fe-4S binding domain SEEM42N_RS12205 PF04976 DMSO reductase anchor subunit (DmsC) SEEM42N_RS12210 PF02613 Nitrate reductase delta subunit SEEM42N_RS12215 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS12220 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SEEM42N_RS12225 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS12230 PF00005 ABC transporter SEEM42N_RS12230 PF00571 CBS domain SEEM42N_RS12235 PF00654 Voltage gated chloride channel SEEM42N_RS12245 PF00480 ROK family SEEM42N_RS12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS12250 PF03466 LysR substrate binding domain SEEM42N_RS12255 PF07690 Major Facilitator Superfamily SEEM42N_RS12265 PF00089 Trypsin SEEM42N_RS12270 PF00893 Small Multidrug Resistance protein SEEM42N_RS12275 PF00893 Small Multidrug Resistance protein SEEM42N_RS12280 PF01594 AI-2E family transporter SEEM42N_RS12285 PF02233 NAD(P) transhydrogenase beta subunit SEEM42N_RS12290 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SEEM42N_RS12290 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SEEM42N_RS12290 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SEEM42N_RS12295 PF07338 Protein of unknown function (DUF1471) SEEM42N_RS12300 PF13520 Amino acid permease SEEM42N_RS12305 PF06942 GlpM protein SEEM42N_RS12310 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS12310 PF00072 Response regulator receiver domain SEEM42N_RS12315 PF00267 Gram-negative porin SEEM42N_RS12320 PF13382 Adenine deaminase C-terminal domain SEEM42N_RS12320 PF01979 Amidohydrolase family SEEM42N_RS12325 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS12325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS12325 PF00672 HAMP domain SEEM42N_RS12330 PF05472 DNA replication terminus site-binding protein (Ter protein) SEEM42N_RS12335 PF10415 Fumarase C C-terminus SEEM42N_RS12335 PF00206 Lyase SEEM42N_RS12340 PF05681 Fumarate hydratase (Fumerase) SEEM42N_RS12340 PF05683 Fumarase C-terminus SEEM42N_RS12345 PF01238 Phosphomannose isomerase type I SEEM42N_RS12350 PF06097 Bacterial protein of unknown function (DUF945) SEEM42N_RS12355 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SEEM42N_RS12355 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS12360 PF00367 phosphotransferase system, EIIB SEEM42N_RS12360 PF02378 Phosphotransferase system, EIIC SEEM42N_RS12365 PF00155 Aminotransferase class I and II SEEM42N_RS12370 PF00962 Adenosine/AMP deaminase SEEM42N_RS12375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SEEM42N_RS12375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEM42N_RS12385 PF05321 Haemolysin expression modulating protein SEEM42N_RS12390 PF10754 Protein of unknown function (DUF2569) SEEM42N_RS12395 PF02508 Rnf-Nqr subunit, membrane protein SEEM42N_RS12400 PF04060 Putative Fe-S cluster SEEM42N_RS12405 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SEEM42N_RS12405 PF10531 SLBB domain SEEM42N_RS12405 PF13375 RnfC Barrel sandwich hybrid domain SEEM42N_RS12405 PF12838 4Fe-4S dicluster domain SEEM42N_RS12410 PF03116 NQR2, RnfD, RnfE family SEEM42N_RS12415 PF04205 FMN-binding domain SEEM42N_RS12420 PF02508 Rnf-Nqr subunit, membrane protein SEEM42N_RS12425 PF10576 Iron-sulfur binding domain of endonuclease III SEEM42N_RS12425 PF00633 Helix-hairpin-helix motif SEEM42N_RS12425 PF00730 HhH-GPD superfamily base excision DNA repair protein SEEM42N_RS12430 PF00854 POT family SEEM42N_RS12435 PF00043 Glutathione S-transferase, C-terminal domain SEEM42N_RS12435 PF02798 Glutathione S-transferase, N-terminal domain SEEM42N_RS12440 PF08543 Phosphomethylpyrimidine kinase SEEM42N_RS12445 PF01479 S4 domain SEEM42N_RS12445 PF00579 tRNA synthetases class I (W and Y) SEEM42N_RS12450 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SEEM42N_RS12450 PF01243 Pyridoxamine 5'-phosphate oxidase SEEM42N_RS12455 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme SEEM42N_RS12460 PF03702 Anhydro-N-acetylmuramic acid kinase SEEM42N_RS12465 PF05433 Glycine zipper 2TM domain SEEM42N_RS12470 PF01047 MarR family SEEM42N_RS12475 PF07869 Protein of unknown function (DUF1656) SEEM42N_RS12480 PF00529 HlyD membrane-fusion protein of T1SS SEEM42N_RS12480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEM42N_RS12485 PF04632 Fusaric acid resistance protein family SEEM42N_RS12490 PF00080 Copper/zinc superoxide dismutase (SODC) SEEM42N_RS12495 PF00248 Aldo/keto reductase family SEEM42N_RS12500 PF06945 Protein of unknown function (DUF1289) SEEM42N_RS12505 PF16925 Tetracyclin repressor-like, C-terminal domain SEEM42N_RS12505 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS12510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SEEM42N_RS12515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SEEM42N_RS12520 PF00929 Exonuclease SEEM42N_RS12525 PF00462 Glutaredoxin SEEM42N_RS12530 PF00877 NlpC/P60 family SEEM42N_RS12535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SEEM42N_RS12535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SEEM42N_RS12545 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS12550 PF03466 LysR substrate binding domain SEEM42N_RS12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS12555 PF07690 Major Facilitator Superfamily SEEM42N_RS12565 PF00677 Lumazine binding domain SEEM42N_RS12585 PF01312 FlhB HrpN YscU SpaS Family SEEM42N_RS12590 PF01311 Bacterial export proteins, family 1 SEEM42N_RS12595 PF01313 Bacterial export proteins, family 3 SEEM42N_RS12600 PF00813 FliP family SEEM42N_RS12605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SEEM42N_RS12620 PF18269 T3SS EscN ATPase C-terminal domain SEEM42N_RS12620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEM42N_RS12625 PF00771 FHIPEP family SEEM42N_RS12635 PF07201 HrpJ-like domain SEEM42N_RS12650 PF01514 Secretory protein of YscJ/FliF family SEEM42N_RS12690 PF05802 Enterobacterial EspB protein SEEM42N_RS12695 PF04888 Secretion system effector C (SseC) like family SEEM42N_RS12705 PF03433 EspA-like secreted protein SEEM42N_RS12725 PF03958 Bacterial type II/III secretion system short domain SEEM42N_RS12725 PF00263 Bacterial type II and III secretion system protein SEEM42N_RS12735 PF00072 Response regulator receiver domain SEEM42N_RS12735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS12735 PF01627 Hpt domain SEEM42N_RS12735 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS12735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SEEM42N_RS12735 PF00672 HAMP domain SEEM42N_RS12740 PF00072 Response regulator receiver domain SEEM42N_RS12740 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS12745 PF13411 MerR HTH family regulatory protein SEEM42N_RS12750 PF08349 Protein of unknown function (DUF1722) SEEM42N_RS12755 PF10965 Protein of unknown function (DUF2767) SEEM42N_RS12760 PF00072 Response regulator receiver domain SEEM42N_RS12760 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS12765 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS12770 PF13247 4Fe-4S dicluster domain SEEM42N_RS12775 PF03916 Polysulphide reductase, NrfD SEEM42N_RS12780 PF00384 Molybdopterin oxidoreductase SEEM42N_RS12780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEM42N_RS12780 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS12785 PF00294 pfkB family carbohydrate kinase SEEM42N_RS12795 PF00561 alpha/beta hydrolase fold SEEM42N_RS12800 PF00324 Amino acid permease SEEM42N_RS12805 PF02887 Pyruvate kinase, alpha/beta domain SEEM42N_RS12805 PF00224 Pyruvate kinase, barrel domain SEEM42N_RS12810 PF04728 Lipoprotein leucine-zipper SEEM42N_RS12815 PF03734 L,D-transpeptidase catalytic domain SEEM42N_RS12815 PF01476 LysM domain SEEM42N_RS12815 PF17969 L,D-transpeptidase C-terminal domain SEEM42N_RS12820 PF02657 Fe-S metabolism associated domain SEEM42N_RS12825 PF00266 Aminotransferase class-V SEEM42N_RS12830 PF01458 Uncharacterized protein family (UPF0051) SEEM42N_RS12835 PF00005 ABC transporter SEEM42N_RS12840 PF01458 Uncharacterized protein family (UPF0051) SEEM42N_RS12845 PF01521 Iron-sulphur cluster biosynthesis SEEM42N_RS12855 PF15930 Domain of unknown function SEEM42N_RS12860 PF03061 Thioesterase superfamily SEEM42N_RS12865 PF13183 4Fe-4S dicluster domain SEEM42N_RS12865 PF01565 FAD binding domain SEEM42N_RS12865 PF02913 FAD linked oxidases, C-terminal domain SEEM42N_RS12870 PF01594 AI-2E family transporter SEEM42N_RS12880 PF01487 Type I 3-dehydroquinase SEEM42N_RS12885 PF02896 PEP-utilising enzyme, TIM barrel domain SEEM42N_RS12885 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SEEM42N_RS12885 PF00391 PEP-utilising enzyme, mobile domain SEEM42N_RS12890 PF03618 Kinase/pyrophosphorylase SEEM42N_RS12895 PF00793 DAHP synthetase I family SEEM42N_RS12900 PF10636 Hemin uptake protein hemP SEEM42N_RS12905 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SEEM42N_RS12910 PF00563 EAL domain SEEM42N_RS12915 PF00877 NlpC/P60 family SEEM42N_RS12920 PF00005 ABC transporter SEEM42N_RS12925 PF00255 Glutathione peroxidase SEEM42N_RS12930 PF01032 FecCD transport family SEEM42N_RS12935 PF00216 Bacterial DNA-binding protein SEEM42N_RS12940 PF03147 Ferredoxin-fold anticodon binding domain SEEM42N_RS12940 PF03483 B3/4 domain SEEM42N_RS12940 PF01588 Putative tRNA binding domain SEEM42N_RS12940 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SEEM42N_RS12940 PF03484 tRNA synthetase B5 domain SEEM42N_RS12945 PF01409 tRNA synthetases class II core domain (F) SEEM42N_RS12945 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SEEM42N_RS12955 PF00453 Ribosomal protein L20 SEEM42N_RS12960 PF01632 Ribosomal protein L35 SEEM42N_RS12965 PF05198 Translation initiation factor IF-3, N-terminal domain SEEM42N_RS12965 PF00707 Translation initiation factor IF-3, C-terminal domain SEEM42N_RS12970 PF03129 Anticodon binding domain SEEM42N_RS12970 PF02824 TGS domain SEEM42N_RS12970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SEEM42N_RS12970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SEEM42N_RS12975 PF01223 DNA/RNA non-specific endonuclease SEEM42N_RS12990 PF04338 Protein of unknown function, DUF481 SEEM42N_RS12995 PF00294 pfkB family carbohydrate kinase SEEM42N_RS13000 PF11080 Endoribonuclease GhoS SEEM42N_RS13005 PF03881 Fructosamine kinase SEEM42N_RS13010 PF14002 YniB-like protein SEEM42N_RS13015 PF13419 Haloacid dehalogenase-like hydrolase SEEM42N_RS13020 PF04307 LexA-binding, inner membrane-associated putative hydrolase SEEM42N_RS13030 PF10729 Cell division activator CedA SEEM42N_RS13035 PF00199 Catalase SEEM42N_RS13035 PF06628 Catalase-related immune-responsive SEEM42N_RS13035 PF18011 C-terminal domain found in long catalases SEEM42N_RS13040 PF04794 YdjC-like protein SEEM42N_RS13045 PF11975 Family 4 glycosyl hydrolase C-terminal domain SEEM42N_RS13045 PF02056 Family 4 glycosyl hydrolase SEEM42N_RS13050 PF12833 Helix-turn-helix domain SEEM42N_RS13050 PF07883 Cupin domain SEEM42N_RS13055 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SEEM42N_RS13060 PF02378 Phosphotransferase system, EIIC SEEM42N_RS13065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEM42N_RS13070 PF04355 SmpA / OmlA family SEEM42N_RS13075 PF02540 NAD synthase SEEM42N_RS13085 PF07813 LTXXQ motif family protein SEEM42N_RS13090 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SEEM42N_RS13095 PF04996 Succinylarginine dihydrolase SEEM42N_RS13100 PF00171 Aldehyde dehydrogenase family SEEM42N_RS13105 PF04958 Arginine N-succinyltransferase beta subunit SEEM42N_RS13110 PF00202 Aminotransferase class-III SEEM42N_RS13115 PF03372 Endonuclease/Exonuclease/phosphatase family SEEM42N_RS13120 PF00293 NUDIX domain SEEM42N_RS13125 PF07383 Protein of unknown function (DUF1496) SEEM42N_RS13130 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SEEM42N_RS13130 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SEEM42N_RS13135 PF01751 Toprim domain SEEM42N_RS13135 PF01131 DNA topoisomerase SEEM42N_RS13140 PF02769 AIR synthase related protein, C-terminal domain SEEM42N_RS13140 PF00586 AIR synthase related protein, N-terminal domain SEEM42N_RS13145 PF00881 Nitroreductase family SEEM42N_RS13150 PF01343 Peptidase family S49 SEEM42N_RS13155 PF00710 Asparaginase, N-terminal SEEM42N_RS13155 PF17763 Glutaminase/Asparaginase C-terminal domain SEEM42N_RS13160 PF00857 Isochorismatase family SEEM42N_RS13165 PF07023 Protein of unknown function (DUF1315) SEEM42N_RS13170 PF01641 SelR domain SEEM42N_RS13175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SEEM42N_RS13175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SEEM42N_RS13180 PF01263 Aldose 1-epimerase SEEM42N_RS13185 PF00248 Aldo/keto reductase family SEEM42N_RS13190 PF04055 Radical SAM superfamily SEEM42N_RS13190 PF13186 Iron-sulfur cluster-binding domain SEEM42N_RS13195 PF06629 MltA-interacting protein MipA SEEM42N_RS13200 PF08298 PrkA AAA domain SEEM42N_RS13200 PF06798 PrkA serine protein kinase C-terminal domain SEEM42N_RS13205 PF04285 Protein of unknown function (DUF444) SEEM42N_RS13215 PF17155 Gammaproteobacterial periplasmic sensor domain SEEM42N_RS13215 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS13220 PF04073 Aminoacyl-tRNA editing domain SEEM42N_RS13230 PF04284 Protein of unknown function (DUF441) SEEM42N_RS13235 PF12833 Helix-turn-helix domain SEEM42N_RS13235 PF02311 AraC-like ligand binding domain SEEM42N_RS13240 PF07690 Major Facilitator Superfamily SEEM42N_RS13245 PF04343 Protein of unknown function, DUF488 SEEM42N_RS13255 PF03891 Domain of unknown function (DUF333) SEEM42N_RS13265 PF04226 Transglycosylase associated protein SEEM42N_RS13275 PF08956 Domain of unknown function (DUF1869) SEEM42N_RS13280 PF09313 Domain of unknown function (DUF1971) SEEM42N_RS13285 PF01810 LysE type translocator SEEM42N_RS13290 PF01817 Chorismate mutase type II SEEM42N_RS13300 PF00376 MerR family regulatory protein SEEM42N_RS13300 PF09278 MerR, DNA binding SEEM42N_RS13310 PF13427 Domain of unknown function (DUF4111) SEEM42N_RS13310 PF01909 Nucleotidyltransferase domain SEEM42N_RS13315 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SEEM42N_RS13330 PF00924 Mechanosensitive ion channel SEEM42N_RS13335 PF00005 ABC transporter SEEM42N_RS13340 PF00005 ABC transporter SEEM42N_RS13345 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS13345 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEM42N_RS13350 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS13355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEM42N_RS13365 PF01292 Prokaryotic cytochrome b561 SEEM42N_RS13375 PF00011 Hsp20/alpha crystallin family SEEM42N_RS13395 PF06316 Enterobacterial Ail/Lom protein SEEM42N_RS13405 PF00313 'Cold-shock' DNA-binding domain SEEM42N_RS13410 PF00652 Ricin-type beta-trefoil lectin domain SEEM42N_RS13415 PF06183 DinI-like family SEEM42N_RS13425 PF03372 Endonuclease/Exonuclease/phosphatase family SEEM42N_RS13460 PF00180 Isocitrate/isopropylmalate dehydrogenase SEEM42N_RS13465 PF01844 HNH endonuclease SEEM42N_RS13470 PF00239 Resolvase, N terminal domain SEEM42N_RS13470 PF02796 Helix-turn-helix domain of resolvase SEEM42N_RS13480 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SEEM42N_RS13490 PF07484 Phage Tail Collar Domain SEEM42N_RS13515 PF00180 Isocitrate/isopropylmalate dehydrogenase SEEM42N_RS13520 PF00849 RNA pseudouridylate synthase SEEM42N_RS13530 PF00293 NUDIX domain SEEM42N_RS13540 PF04356 Protein of unknown function (DUF489) SEEM42N_RS13545 PF00206 Lyase SEEM42N_RS13545 PF08328 Adenylosuccinate lyase C-terminal SEEM42N_RS13550 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS13550 PF00072 Response regulator receiver domain SEEM42N_RS13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS13555 PF08918 PhoQ Sensor SEEM42N_RS13560 PF08007 Cupin superfamily protein SEEM42N_RS13570 PF01546 Peptidase family M20/M25/M40 SEEM42N_RS13570 PF07687 Peptidase dimerisation domain SEEM42N_RS13575 PF08402 TOBE domain SEEM42N_RS13575 PF00005 ABC transporter SEEM42N_RS13580 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS13585 PF06767 Sif protein SEEM42N_RS13590 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS13595 PF13416 Bacterial extracellular solute-binding protein SEEM42N_RS13600 PF02146 Sir2 family SEEM42N_RS13605 PF00480 ROK family SEEM42N_RS13610 PF12704 MacB-like periplasmic core domain SEEM42N_RS13610 PF02687 FtsX-like permease family SEEM42N_RS13615 PF00005 ABC transporter SEEM42N_RS13620 PF12704 MacB-like periplasmic core domain SEEM42N_RS13620 PF02687 FtsX-like permease family SEEM42N_RS13625 PF17757 UvrB interaction domain SEEM42N_RS13625 PF03461 TRCF domain SEEM42N_RS13625 PF00271 Helicase conserved C-terminal domain SEEM42N_RS13625 PF02559 CarD-like/TRCF domain SEEM42N_RS13625 PF00270 DEAD/DEAH box helicase SEEM42N_RS13630 PF01476 LysM domain SEEM42N_RS13630 PF03734 L,D-transpeptidase catalytic domain SEEM42N_RS13630 PF17969 L,D-transpeptidase C-terminal domain SEEM42N_RS13635 PF07338 Protein of unknown function (DUF1471) SEEM42N_RS13640 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS13645 PF05433 Glycine zipper 2TM domain SEEM42N_RS13650 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS13655 PF05728 Uncharacterised protein family (UPF0227) SEEM42N_RS13660 PF00933 Glycosyl hydrolase family 3 N terminal domain SEEM42N_RS13665 PF01636 Phosphotransferase enzyme family SEEM42N_RS13670 PF13036 Peptidoglycan-synthase activator LpoB SEEM42N_RS13675 PF07233 Protein of unknown function (DUF1425) SEEM42N_RS13680 PF01230 HIT domain SEEM42N_RS13685 PF07715 TonB-dependent Receptor Plug Domain SEEM42N_RS13685 PF00593 TonB dependent receptor SEEM42N_RS13690 PF02378 Phosphotransferase system, EIIC SEEM42N_RS13690 PF00367 phosphotransferase system, EIIB SEEM42N_RS13695 PF01026 TatD related DNase SEEM42N_RS13700 PF09115 DNA polymerase III, delta subunit, C terminal SEEM42N_RS13705 PF02223 Thymidylate kinase SEEM42N_RS13710 PF02618 YceG-like family SEEM42N_RS13715 PF01063 Amino-transferase class IV SEEM42N_RS13720 PF00419 Fimbrial protein SEEM42N_RS13725 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS13725 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS13730 PF00577 Outer membrane usher protein SEEM42N_RS13730 PF13954 PapC N-terminal domain SEEM42N_RS13730 PF13953 PapC C-terminal domain SEEM42N_RS13750 PF02801 Beta-ketoacyl synthase, C-terminal domain SEEM42N_RS13750 PF00109 Beta-ketoacyl synthase, N-terminal domain SEEM42N_RS13755 PF00550 Phosphopantetheine attachment site SEEM42N_RS13765 PF00698 Acyl transferase domain SEEM42N_RS13770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SEEM42N_RS13770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SEEM42N_RS13775 PF02504 Fatty acid synthesis protein SEEM42N_RS13780 PF01783 Ribosomal L32p protein family SEEM42N_RS13785 PF02620 Large ribosomal RNA subunit accumulation protein YceD SEEM42N_RS13790 PF02545 Maf-like protein SEEM42N_RS13795 PF00849 RNA pseudouridylate synthase SEEM42N_RS13795 PF01479 S4 domain SEEM42N_RS13800 PF12111 Polyribonucleotide phosphorylase C terminal SEEM42N_RS13800 PF10150 Ribonuclease E/G family SEEM42N_RS13800 PF00575 S1 RNA binding domain SEEM42N_RS13805 PF00669 Bacterial flagellin N-terminal helical region SEEM42N_RS13810 PF00460 Flagella basal body rod protein SEEM42N_RS13810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SEEM42N_RS13815 PF10135 Rod binding protein SEEM42N_RS13815 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SEEM42N_RS13820 PF02119 Flagellar P-ring protein SEEM42N_RS13825 PF02107 Flagellar L-ring protein SEEM42N_RS13830 PF00460 Flagella basal body rod protein SEEM42N_RS13830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SEEM42N_RS13835 PF00460 Flagella basal body rod protein SEEM42N_RS13835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SEEM42N_RS13840 PF07559 Flagellar basal body protein FlaE SEEM42N_RS13840 PF00460 Flagella basal body rod protein SEEM42N_RS13840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SEEM42N_RS13845 PF13861 FlgD Tudor-like domain SEEM42N_RS13845 PF13860 FlgD Ig-like domain SEEM42N_RS13845 PF03963 Flagellar hook capping protein - N-terminal region SEEM42N_RS13850 PF00460 Flagella basal body rod protein SEEM42N_RS13850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SEEM42N_RS13855 PF00460 Flagella basal body rod protein SEEM42N_RS13860 PF13144 Chaperone for flagella basal body P-ring formation SEEM42N_RS13865 PF04316 Anti-sigma-28 factor, FlgM SEEM42N_RS13870 PF05130 FlgN protein SEEM42N_RS13875 PF03023 Lipid II flippase MurJ SEEM42N_RS13880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEM42N_RS13885 PF04337 Protein of unknown function, DUF480 SEEM42N_RS13890 PF13302 Acetyltransferase (GNAT) domain SEEM42N_RS13895 PF07690 Major Facilitator Superfamily SEEM42N_RS13900 PF13417 Glutathione S-transferase, N-terminal domain SEEM42N_RS13900 PF04399 Glutaredoxin 2, C terminal domain SEEM42N_RS13905 PF07273 Protein of unknown function (DUF1439) SEEM42N_RS13910 PF01979 Amidohydrolase family SEEM42N_RS13915 PF06183 DinI-like family SEEM42N_RS13920 PF13991 BssS protein family SEEM42N_RS13925 PF01266 FAD dependent oxidoreductase SEEM42N_RS13930 PF10968 Protein of unknown function (DUF2770) SEEM42N_RS13935 PF01292 Prokaryotic cytochrome b561 SEEM42N_RS13940 PF04264 YceI-like domain SEEM42N_RS13950 PF03279 Bacterial lipid A biosynthesis acyltransferase SEEM42N_RS13955 PF07690 Major Facilitator Superfamily SEEM42N_RS13960 PF13984 MsyB protein SEEM42N_RS13965 PF07119 Protein of unknown function (DUF1375) SEEM42N_RS13970 PF00535 Glycosyl transferase family 2 SEEM42N_RS13975 PF04349 Periplasmic glucan biosynthesis protein, MdoG SEEM42N_RS13980 PF01757 Acyltransferase family SEEM42N_RS13985 PF13091 PLD-like domain SEEM42N_RS13990 PF01661 Macro domain SEEM42N_RS14000 PF10610 Thin aggregative fimbriae synthesis protein SEEM42N_RS14005 PF07012 Curlin associated repeat SEEM42N_RS14010 PF07012 Curlin associated repeat SEEM42N_RS14015 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS14020 PF10627 Curli assembly protein CsgE SEEM42N_RS14025 PF10614 Type VIII secretion system (T8SS), CsgF protein SEEM42N_RS14030 PF03783 Curli production assembly/transport component CsgG SEEM42N_RS14035 PF06496 Protein of unknown function (DUF1097) SEEM42N_RS14040 PF02613 Nitrate reductase delta subunit SEEM42N_RS14045 PF02811 PHP domain SEEM42N_RS14050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SEEM42N_RS14065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SEEM42N_RS14065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SEEM42N_RS14070 PF07690 Major Facilitator Superfamily SEEM42N_RS14075 PF06178 Oligogalacturonate-specific porin protein (KdgM) SEEM42N_RS14080 PF01344 Kelch motif SEEM42N_RS14085 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SEEM42N_RS14090 PF00474 Sodium:solute symporter family SEEM42N_RS14095 PF01380 SIS domain SEEM42N_RS14095 PF01418 Helix-turn-helix domain, rpiR family SEEM42N_RS14100 PF02562 PhoH-like protein SEEM42N_RS14105 PF00474 Sodium:solute symporter family SEEM42N_RS14110 PF01619 Proline dehydrogenase SEEM42N_RS14110 PF14850 DNA-binding domain of Proline dehydrogenase SEEM42N_RS14110 PF00171 Aldehyde dehydrogenase family SEEM42N_RS14110 PF18327 Proline utilization A proline dehydrogenase N-terminal domain SEEM42N_RS14120 PF08362 YcdC-like protein, C-terminal region SEEM42N_RS14120 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS14125 PF10685 Stress-induced bacterial acidophilic repeat motif SEEM42N_RS14130 PF03358 NADPH-dependent FMN reductase SEEM42N_RS14135 PF13993 YccJ-like protein SEEM42N_RS14140 PF00328 Histidine phosphatase superfamily (branch 2) SEEM42N_RS14145 PF00578 AhpC/TSA family SEEM42N_RS14150 PF06965 Na+/H+ antiporter 1 SEEM42N_RS14150 PF13462 Thioredoxin SEEM42N_RS14155 PF13098 Thioredoxin-like domain SEEM42N_RS14155 PF11412 Disulphide bond corrector protein DsbC SEEM42N_RS14155 PF02683 Cytochrome C biogenesis protein transmembrane region SEEM42N_RS14165 PF01556 DnaJ C terminal domain SEEM42N_RS14165 PF00226 DnaJ domain SEEM42N_RS14180 PF12706 Beta-lactamase superfamily domain SEEM42N_RS14190 PF07690 Major Facilitator Superfamily SEEM42N_RS14195 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEM42N_RS14200 PF01557 Fumarylacetoacetate (FAA) hydrolase family SEEM42N_RS14205 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase SEEM42N_RS14210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SEEM42N_RS14215 PF00171 Aldehyde dehydrogenase family SEEM42N_RS14220 PF01557 Fumarylacetoacetate (FAA) hydrolase family SEEM42N_RS14225 PF01047 MarR family SEEM42N_RS14230 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal SEEM42N_RS14230 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal SEEM42N_RS14235 PF01613 Flavin reductase like domain SEEM42N_RS14240 PF00576 HIUase/Transthyretin family SEEM42N_RS14245 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS14245 PF00072 Response regulator receiver domain SEEM42N_RS14250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS14250 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS14255 PF03577 Peptidase family C69 SEEM42N_RS14265 PF13132 Domain of unknown function (DUF3950) SEEM42N_RS14270 PF05925 Enterobacterial virulence protein IpgD SEEM42N_RS14275 PF07824 Type III secretion chaperone domain SEEM42N_RS14280 PF00805 Pentapeptide repeats (8 copies) SEEM42N_RS14295 PF01027 Inhibitor of apoptosis-promoting Bax1 SEEM42N_RS14300 PF04358 DsrC like protein SEEM42N_RS14305 PF00708 Acylphosphatase SEEM42N_RS14310 PF12833 Helix-turn-helix domain SEEM42N_RS14315 PF01161 Phosphatidylethanolamine-binding protein SEEM42N_RS14320 PF17785 PUA-like domain SEEM42N_RS14320 PF10672 S-adenosylmethionine-dependent methyltransferase SEEM42N_RS14325 PF08755 Hemimethylated DNA-binding protein YccV like SEEM42N_RS14330 PF13380 CoA binding domain SEEM42N_RS14335 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) SEEM42N_RS14340 PF02142 MGS-like domain SEEM42N_RS14345 PF13361 UvrD-like helicase C-terminal domain SEEM42N_RS14345 PF00580 UvrD/REP helicase N-terminal domain SEEM42N_RS14345 PF12462 DNA helicase IV / RNA helicase N terminal SEEM42N_RS14350 PF03733 Inner membrane component domain SEEM42N_RS14355 PF12805 FUSC-like inner membrane protein yccS SEEM42N_RS14360 PF04993 TfoX N-terminal domain SEEM42N_RS14360 PF04994 TfoX C-terminal domain SEEM42N_RS14365 PF03846 Cell division inhibitor SulA SEEM42N_RS14370 PF00691 OmpA family SEEM42N_RS14370 PF01389 OmpA-like transmembrane domain SEEM42N_RS14375 PF06303 MatP N-terminal domain SEEM42N_RS14375 PF17414 MatP C-terminal ribbon-helix-helix domain SEEM42N_RS14380 PF05362 Lon protease (S16) C-terminal proteolytic domain SEEM42N_RS14380 PF13654 AAA domain SEEM42N_RS14385 PF07977 FabA-like domain SEEM42N_RS14390 PF04957 Ribosome modulation factor SEEM42N_RS14395 PF03886 ABC-type transport auxiliary lipoprotein component SEEM42N_RS14400 PF02470 MlaD protein SEEM42N_RS14405 PF04403 Paraquat-inducible protein A SEEM42N_RS14410 PF12848 ABC transporter SEEM42N_RS14410 PF00005 ABC transporter SEEM42N_RS14410 PF16326 ABC transporter C-terminal domain SEEM42N_RS14415 PF02926 THUMP domain SEEM42N_RS14415 PF01170 Putative RNA methylase family UPF0020 SEEM42N_RS14415 PF10672 S-adenosylmethionine-dependent methyltransferase SEEM42N_RS14420 PF03473 MOSC domain SEEM42N_RS14420 PF03476 MOSC N-terminal beta barrel domain SEEM42N_RS14420 PF00111 2Fe-2S iron-sulfur cluster binding domain SEEM42N_RS14425 PF07126 Cell-division protein ZapC SEEM42N_RS14430 PF01180 Dihydroorotate dehydrogenase SEEM42N_RS14435 PF11940 Domain of unknown function (DUF3458) Ig-like fold SEEM42N_RS14435 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SEEM42N_RS14435 PF01433 Peptidase family M1 domain SEEM42N_RS14440 PF06183 DinI-like family SEEM42N_RS14450 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SEEM42N_RS14610 PF04466 Phage terminase large subunit SEEM42N_RS14610 PF17288 Terminase RNAseH like domain SEEM42N_RS14630 PF00182 Chitinase class I SEEM42N_RS14640 PF03589 Antitermination protein SEEM42N_RS14665 PF06183 DinI-like family SEEM42N_RS14695 PF01695 IstB-like ATP binding protein SEEM42N_RS14730 PF12684 PDDEXK-like domain of unknown function (DUF3799) SEEM42N_RS14730 PF06630 Enterobacterial exodeoxyribonuclease VIII SEEM42N_RS14750 PF12167 Arm DNA-binding domain SEEM42N_RS14750 PF00589 Phage integrase family SEEM42N_RS14755 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SEEM42N_RS14755 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SEEM42N_RS14760 PF01336 OB-fold nucleic acid binding domain SEEM42N_RS14760 PF00152 tRNA synthetases class II (D, K and N) SEEM42N_RS14765 PF00267 Gram-negative porin SEEM42N_RS14770 PF00155 Aminotransferase class I and II SEEM42N_RS14775 PF00753 Metallo-beta-lactamase superfamily SEEM42N_RS14780 PF05951 Bacterial protein of unknown function (DUF882) SEEM42N_RS14785 PF03734 L,D-transpeptidase catalytic domain SEEM42N_RS14785 PF01471 Putative peptidoglycan binding domain SEEM42N_RS14790 PF16330 MukB hinge domain SEEM42N_RS14790 PF04310 MukB N-terminal SEEM42N_RS14795 PF04288 MukE-like family SEEM42N_RS14800 PF03882 MukF winged-helix domain SEEM42N_RS14800 PF17192 MukF middle domain SEEM42N_RS14800 PF17193 MukF C-terminal domain SEEM42N_RS14805 PF13847 Methyltransferase domain SEEM42N_RS14810 PF02698 DUF218 domain SEEM42N_RS14815 PF01636 Phosphotransferase enzyme family SEEM42N_RS14820 PF02348 Cytidylyltransferase SEEM42N_RS14825 PF03966 Trm112p-like protein SEEM42N_RS14830 PF06224 Winged helix DNA-binding domain SEEM42N_RS14835 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SEEM42N_RS14840 PF00005 ABC transporter SEEM42N_RS14840 PF00664 ABC transporter transmembrane region SEEM42N_RS14845 PF00753 Metallo-beta-lactamase superfamily SEEM42N_RS14845 PF03772 Competence protein SEEM42N_RS14850 PF00216 Bacterial DNA-binding protein SEEM42N_RS14855 PF00575 S1 RNA binding domain SEEM42N_RS14860 PF02224 Cytidylate kinase SEEM42N_RS14865 PF01435 Peptidase family M48 SEEM42N_RS14870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SEEM42N_RS14875 PF00266 Aminotransferase class-V SEEM42N_RS14880 PF04239 Protein of unknown function (DUF421) SEEM42N_RS14885 PF18381 YcaO cyclodehydratase C-terminal domain SEEM42N_RS14885 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SEEM42N_RS14890 PF01226 Formate/nitrite transporter SEEM42N_RS14895 PF01228 Glycine radical SEEM42N_RS14895 PF02901 Pyruvate formate lyase-like SEEM42N_RS14900 PF11047 Salmonella outer protein D SEEM42N_RS14905 PF04055 Radical SAM superfamily SEEM42N_RS14910 PF13520 Amino acid permease SEEM42N_RS14915 PF07690 Major Facilitator Superfamily SEEM42N_RS14920 PF04976 DMSO reductase anchor subunit (DmsC) SEEM42N_RS14925 PF12800 4Fe-4S binding domain SEEM42N_RS14925 PF13247 4Fe-4S dicluster domain SEEM42N_RS14930 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS14930 PF00384 Molybdopterin oxidoreductase SEEM42N_RS14930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEM42N_RS14935 PF02403 Seryl-tRNA synthetase N-terminal domain SEEM42N_RS14935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SEEM42N_RS14940 PF16193 AAA C-terminal domain SEEM42N_RS14940 PF12002 MgsA AAA+ ATPase C terminal SEEM42N_RS14940 PF00004 ATPase family associated with various cellular activities (AAA) SEEM42N_RS14945 PF03548 Outer membrane lipoprotein carrier protein LolA SEEM42N_RS14950 PF01580 FtsK/SpoIIIE family SEEM42N_RS14950 PF09397 Ftsk gamma domain SEEM42N_RS14950 PF17854 FtsK alpha domain SEEM42N_RS14950 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SEEM42N_RS14955 PF01037 Lrp/AsnC ligand binding domain SEEM42N_RS14960 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS14965 PF00005 ABC transporter SEEM42N_RS14965 PF00664 ABC transporter transmembrane region SEEM42N_RS14970 PF00664 ABC transporter transmembrane region SEEM42N_RS14970 PF00005 ABC transporter SEEM42N_RS14975 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SEEM42N_RS14985 PF01176 Translation initiation factor 1A / IF-1 SEEM42N_RS14990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS14990 PF03466 LysR substrate binding domain SEEM42N_RS14995 PF02678 Pirin SEEM42N_RS14995 PF05726 Pirin C-terminal cupin domain SEEM42N_RS15000 PF00857 Isochorismatase family SEEM42N_RS15030 PF07724 AAA domain (Cdc48 subfamily) SEEM42N_RS15030 PF02861 Clp amino terminal domain, pathogenicity island component SEEM42N_RS15030 PF17871 AAA lid domain SEEM42N_RS15030 PF00004 ATPase family associated with various cellular activities (AAA) SEEM42N_RS15030 PF10431 C-terminal, D2-small domain, of ClpB protein SEEM42N_RS15035 PF02617 ATP-dependent Clp protease adaptor protein ClpS SEEM42N_RS15040 PF00313 'Cold-shock' DNA-binding domain SEEM42N_RS15045 PF12704 MacB-like periplasmic core domain SEEM42N_RS15045 PF00005 ABC transporter SEEM42N_RS15045 PF02687 FtsX-like permease family SEEM42N_RS15050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEM42N_RS15055 PF04393 Protein of unknown function (DUF535) SEEM42N_RS15060 PF11398 Protein of unknown function (DUF2813) SEEM42N_RS15065 PF03956 Lysine exporter LysO SEEM42N_RS15070 PF03063 Prismane/CO dehydrogenase family SEEM42N_RS15075 PF00111 2Fe-2S iron-sulfur cluster binding domain SEEM42N_RS15075 PF00175 Oxidoreductase NAD-binding domain SEEM42N_RS15075 PF00970 Oxidoreductase FAD-binding domain SEEM42N_RS15080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEM42N_RS15080 PF00205 Thiamine pyrophosphate enzyme, central domain SEEM42N_RS15080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEM42N_RS15085 PF01212 Beta-eliminating lyase SEEM42N_RS15090 PF11066 Protein of unknown function (DUF2867) SEEM42N_RS15090 PF13460 NAD(P)H-binding SEEM42N_RS15095 PF01370 NAD dependent epimerase/dehydratase family SEEM42N_RS15100 PF01510 N-acetylmuramoyl-L-alanine amidase SEEM42N_RS15105 PF01906 Putative heavy-metal-binding SEEM42N_RS15110 PF06183 DinI-like family SEEM42N_RS15115 PF03515 Colicin-like bacteriocin tRNase domain SEEM42N_RS15115 PF01024 Colicin pore forming domain SEEM42N_RS15120 PF03515 Colicin-like bacteriocin tRNase domain SEEM42N_RS15120 PF11429 Colicin D SEEM42N_RS15120 PF06958 S-type Pyocin SEEM42N_RS15135 PF01527 Transposase SEEM42N_RS15140 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SEEM42N_RS15150 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) SEEM42N_RS15155 PF04865 Baseplate J-like protein SEEM42N_RS15195 PF04984 Phage tail sheath protein subtilisin-like domain SEEM42N_RS15195 PF17482 Phage tail sheath C-terminal domain SEEM42N_RS15245 PF03354 Phage Terminase SEEM42N_RS15270 PF10721 Protein of unknown function (DUF2514) SEEM42N_RS15275 PF00182 Chitinase class I SEEM42N_RS15295 PF03589 Antitermination protein SEEM42N_RS15315 PF01381 Helix-turn-helix SEEM42N_RS15315 PF00717 Peptidase S24-like SEEM42N_RS15365 PF00712 DNA polymerase III beta subunit, N-terminal domain SEEM42N_RS15365 PF02767 DNA polymerase III beta subunit, central domain SEEM42N_RS15365 PF02768 DNA polymerase III beta subunit, C-terminal domain SEEM42N_RS15390 PF12167 Arm DNA-binding domain SEEM42N_RS15390 PF00589 Phage integrase family SEEM42N_RS15395 PF12883 Protein of unknown function (DUF3828) SEEM42N_RS15400 PF00005 ABC transporter SEEM42N_RS15405 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEM42N_RS15410 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS15415 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS15420 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEM42N_RS15435 PF03611 PTS system sugar-specific permease component SEEM42N_RS15440 PF05958 tRNA (Uracil-5-)-methyltransferase SEEM42N_RS15445 PF10767 Protein of unknown function (DUF2593) SEEM42N_RS15450 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS15455 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS15460 PF08402 TOBE domain SEEM42N_RS15460 PF00005 ABC transporter SEEM42N_RS15465 PF13416 Bacterial extracellular solute-binding protein SEEM42N_RS15470 PF10722 Putative bacterial sensory transduction regulator SEEM42N_RS15475 PF08443 RimK-like ATP-grasp domain SEEM42N_RS15475 PF18030 RimK PreATP-grasp domain SEEM42N_RS15480 PF00881 Nitroreductase family SEEM42N_RS15485 PF07214 Protein of unknown function (DUF1418) SEEM42N_RS15490 PF00462 Glutaredoxin SEEM42N_RS15495 PF11045 Putative inner membrane protein of Enterobacteriaceae SEEM42N_RS15500 PF06826 Predicted Permease Membrane Region SEEM42N_RS15500 PF02080 TrkA-C domain SEEM42N_RS15505 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS15510 PF07690 Major Facilitator Superfamily SEEM42N_RS15520 PF07690 Major Facilitator Superfamily SEEM42N_RS15525 PF01569 PAP2 superfamily SEEM42N_RS15530 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS15530 PF00455 DeoR C terminal sensor domain SEEM42N_RS15535 PF00768 D-alanyl-D-alanine carboxypeptidase SEEM42N_RS15535 PF07943 Penicillin-binding protein 5, C-terminal domain SEEM42N_RS15540 PF13417 Glutathione S-transferase, N-terminal domain SEEM42N_RS15540 PF00043 Glutathione S-transferase, C-terminal domain SEEM42N_RS15545 PF07995 Glucose / Sorbosone dehydrogenase SEEM42N_RS15555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS15555 PF03466 LysR substrate binding domain SEEM42N_RS15565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SEEM42N_RS15565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SEEM42N_RS15565 PF02770 Acyl-CoA dehydrogenase, middle domain SEEM42N_RS15575 PF00766 Electron transfer flavoprotein FAD-binding domain SEEM42N_RS15575 PF01012 Electron transfer flavoprotein domain SEEM42N_RS15580 PF01012 Electron transfer flavoprotein domain SEEM42N_RS15585 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEM42N_RS15590 PF10799 Biofilm formation protein (YliH/bssR) SEEM42N_RS15595 PF18693 TRAM domain SEEM42N_RS15595 PF04055 Radical SAM superfamily SEEM42N_RS15595 PF00919 Uncharacterized protein family UPF0004 SEEM42N_RS15600 PF12911 N-terminal TM domain of oligopeptide transport permease C SEEM42N_RS15600 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS15605 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS15610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEM42N_RS15615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SEEM42N_RS15615 PF00005 ABC transporter SEEM42N_RS15620 PF01112 Asparaginase SEEM42N_RS15625 PF03453 MoeA N-terminal region (domain I and II) SEEM42N_RS15625 PF00994 Probable molybdopterin binding domain SEEM42N_RS15625 PF03454 MoeA C-terminal region (domain IV) SEEM42N_RS15630 PF00899 ThiF family SEEM42N_RS15635 PF04055 Radical SAM superfamily SEEM42N_RS15640 PF01228 Glycine radical SEEM42N_RS15640 PF02901 Pyruvate formate lyase-like SEEM42N_RS15650 PF07350 Protein of unknown function (DUF1479) SEEM42N_RS15655 PF00005 ABC transporter SEEM42N_RS15655 PF12848 ABC transporter SEEM42N_RS15660 PF03734 L,D-transpeptidase catalytic domain SEEM42N_RS15660 PF17969 L,D-transpeptidase C-terminal domain SEEM42N_RS15665 PF03600 Citrate transporter SEEM42N_RS15670 PF02742 Iron dependent repressor, metal binding and dimerisation domain SEEM42N_RS15670 PF01325 Iron dependent repressor, N-terminal DNA binding domain SEEM42N_RS15680 PF00884 Sulfatase SEEM42N_RS15685 PF13505 Outer membrane protein beta-barrel domain SEEM42N_RS15690 PF00892 EamA-like transporter family SEEM42N_RS15695 PF00210 Ferritin-like domain SEEM42N_RS15700 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEM42N_RS15705 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS15710 PF00005 ABC transporter SEEM42N_RS15715 PF00924 Mechanosensitive ion channel SEEM42N_RS15720 PF05971 RNA methyltransferase SEEM42N_RS15725 PF01258 Prokaryotic dksA/traR C4-type zinc finger SEEM42N_RS15730 PF07338 Protein of unknown function (DUF1471) SEEM42N_RS15735 PF02885 Glycosyl transferase family, helical bundle domain SEEM42N_RS15740 PF13307 Helicase C-terminal domain SEEM42N_RS15740 PF06733 DEAD_2 SEEM42N_RS15745 PF00270 DEAD/DEAH box helicase SEEM42N_RS15745 PF00271 Helicase conserved C-terminal domain SEEM42N_RS15750 PF09209 Tetracyclin repressor-like, C-terminal domain SEEM42N_RS15750 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS15755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEM42N_RS15760 PF00005 ABC transporter SEEM42N_RS15775 PF11076 Putative inner membrane protein YbhQ SEEM42N_RS15780 PF03372 Endonuclease/Exonuclease/phosphatase family SEEM42N_RS15785 PF13091 PLD-like domain SEEM42N_RS15790 PF03706 Lysylphosphatidylglycerol synthase TM region SEEM42N_RS15805 PF01027 Inhibitor of apoptosis-promoting Bax1 SEEM42N_RS15810 PF02391 MoaE protein SEEM42N_RS15815 PF02597 ThiS family SEEM42N_RS15820 PF01967 MoaC family SEEM42N_RS15825 PF00994 Probable molybdopterin binding domain SEEM42N_RS15830 PF06463 Molybdenum Cofactor Synthesis C SEEM42N_RS15830 PF04055 Radical SAM superfamily SEEM42N_RS15835 PF01933 Uncharacterised protein family UPF0052 SEEM42N_RS15840 PF12468 Type III secretion system leucine rich repeat protein SEEM42N_RS15840 PF14496 C-terminal novel E3 ligase, LRR-interacting SEEM42N_RS15850 PF00271 Helicase conserved C-terminal domain SEEM42N_RS15850 PF04851 Type III restriction enzyme, res subunit SEEM42N_RS15850 PF02151 UvrB/uvrC motif SEEM42N_RS15850 PF12344 Ultra-violet resistance protein B SEEM42N_RS15850 PF17757 UvrB interaction domain SEEM42N_RS15860 PF08241 Methyltransferase domain SEEM42N_RS15865 PF00155 Aminotransferase class I and II SEEM42N_RS15870 PF06968 Biotin and Thiamin Synthesis associated domain SEEM42N_RS15870 PF04055 Radical SAM superfamily SEEM42N_RS15875 PF00202 Aminotransferase class-III SEEM42N_RS15880 PF01161 Phosphatidylethanolamine-binding protein SEEM42N_RS15885 PF00221 Aromatic amino acid lyase SEEM42N_RS15890 PF17391 Urocanase N-terminal domain SEEM42N_RS15890 PF17392 Urocanase C-terminal domain SEEM42N_RS15890 PF01175 Urocanase Rossmann-like domain SEEM42N_RS15895 PF07702 UTRA domain SEEM42N_RS15895 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS15900 PF00491 Arginase family SEEM42N_RS15905 PF01979 Amidohydrolase family SEEM42N_RS15910 PF01095 Pectinesterase SEEM42N_RS15915 PF10282 Lactonase, 7-bladed beta-propeller SEEM42N_RS15925 PF00005 ABC transporter SEEM42N_RS15925 PF03459 TOBE domain SEEM42N_RS15930 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS15940 PF10766 Multidrug efflux pump-associated protein AcrZ SEEM42N_RS15945 PF03459 TOBE domain SEEM42N_RS15945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS15950 PF00005 ABC transporter SEEM42N_RS15960 PF16363 GDP-mannose 4,6 dehydratase SEEM42N_RS15965 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SEEM42N_RS15965 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SEEM42N_RS15970 PF00288 GHMP kinases N terminal domain SEEM42N_RS15970 PF10509 Galactokinase galactose-binding signature SEEM42N_RS15970 PF08544 GHMP kinases C terminal SEEM42N_RS15975 PF01263 Aldose 1-epimerase SEEM42N_RS15980 PF00300 Histidine phosphatase superfamily (branch 1) SEEM42N_RS15985 PF00005 ABC transporter SEEM42N_RS15990 PF01032 FecCD transport family SEEM42N_RS15995 PF00793 DAHP synthetase I family SEEM42N_RS16000 PF13985 YbgS-like protein SEEM42N_RS16005 PF01545 Cation efflux family SEEM42N_RS16010 PF04973 Nicotinamide mononucleotide transporter SEEM42N_RS16015 PF02445 Quinolinate synthetase A protein SEEM42N_RS16065 PF16331 TolA binding protein trimerisation SEEM42N_RS16065 PF13174 Tetratricopeptide repeat SEEM42N_RS16070 PF00691 OmpA family SEEM42N_RS16075 PF07676 WD40-like Beta Propeller Repeat SEEM42N_RS16075 PF04052 TolB amino-terminal domain SEEM42N_RS16080 PF06519 TolA C-terminal SEEM42N_RS16085 PF02472 Biopolymer transport protein ExbD/TolR SEEM42N_RS16090 PF01618 MotA/TolQ/ExbB proton channel family SEEM42N_RS16095 PF03061 Thioesterase superfamily SEEM42N_RS16100 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) SEEM42N_RS16105 PF08173 Membrane bound YbgT-like protein SEEM42N_RS16110 PF02322 Cytochrome bd terminal oxidase subunit II SEEM42N_RS16115 PF01654 Cytochrome bd terminal oxidase subunit I SEEM42N_RS16120 PF00549 CoA-ligase SEEM42N_RS16120 PF02629 CoA binding domain SEEM42N_RS16125 PF08442 ATP-grasp domain SEEM42N_RS16125 PF00549 CoA-ligase SEEM42N_RS16130 PF02817 e3 binding domain SEEM42N_RS16130 PF00364 Biotin-requiring enzyme SEEM42N_RS16130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SEEM42N_RS16135 PF16078 2-oxoglutarate dehydrogenase N-terminus SEEM42N_RS16135 PF00676 Dehydrogenase E1 component SEEM42N_RS16135 PF16870 2-oxoglutarate dehydrogenase C-terminal SEEM42N_RS16135 PF02779 Transketolase, pyrimidine binding domain SEEM42N_RS16140 PF13085 2Fe-2S iron-sulfur cluster binding domain SEEM42N_RS16145 PF02910 Fumarate reductase flavoprotein C-term SEEM42N_RS16145 PF00890 FAD binding domain SEEM42N_RS16150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SEEM42N_RS16155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SEEM42N_RS16165 PF00285 Citrate synthase, C-terminal domain SEEM42N_RS16170 PF05145 Transition state regulatory protein AbrB SEEM42N_RS16175 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SEEM42N_RS16175 PF06827 Zinc finger found in FPG and IleRS SEEM42N_RS16175 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SEEM42N_RS16180 PF03746 LamB/YcsF family SEEM42N_RS16185 PF02626 Carboxyltransferase domain, subdomain A and B SEEM42N_RS16190 PF02682 Carboxyltransferase domain, subdomain C and D SEEM42N_RS16195 PF01784 NIF3 (NGG1p interacting factor 3) SEEM42N_RS16200 PF00854 POT family SEEM42N_RS16205 PF00875 DNA photolyase SEEM42N_RS16205 PF03441 FAD binding domain of DNA photolyase SEEM42N_RS16210 PF10725 Protein of unknown function (DUF2517) SEEM42N_RS16215 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) SEEM42N_RS16220 PF03814 Potassium-transporting ATPase A subunit SEEM42N_RS16230 PF02669 K+-transporting ATPase, c chain SEEM42N_RS16235 PF13492 GAF domain SEEM42N_RS16235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS16235 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS16235 PF13493 Domain of unknown function (DUF4118) SEEM42N_RS16235 PF02702 Osmosensitive K+ channel His kinase sensor domain SEEM42N_RS16240 PF00072 Response regulator receiver domain SEEM42N_RS16240 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS16250 PF01276 Orn/Lys/Arg decarboxylase, major domain SEEM42N_RS16250 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SEEM42N_RS16250 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SEEM42N_RS16255 PF13520 Amino acid permease SEEM42N_RS16265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SEEM42N_RS16265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SEEM42N_RS16265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SEEM42N_RS16265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SEEM42N_RS16270 PF03925 SeqA protein C-terminal domain SEEM42N_RS16270 PF17206 SeqA protein N-terminal domain SEEM42N_RS16275 PF12697 Alpha/beta hydrolase family SEEM42N_RS16280 PF01402 Ribbon-helix-helix protein, copG family SEEM42N_RS16285 PF00258 Flavodoxin SEEM42N_RS16290 PF01475 Ferric uptake regulator family SEEM42N_RS16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS16295 PF03466 LysR substrate binding domain SEEM42N_RS16300 PF00890 FAD binding domain SEEM42N_RS16300 PF14537 Cytochrome c3 SEEM42N_RS16310 PF07690 Major Facilitator Superfamily SEEM42N_RS16315 PF13982 YbfN-like lipoprotein SEEM42N_RS16320 PF03573 outer membrane porin, OprD family SEEM42N_RS16325 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SEEM42N_RS16325 PF00749 tRNA synthetases class I (E and Q), catalytic domain SEEM42N_RS16330 PF02378 Phosphotransferase system, EIIC SEEM42N_RS16330 PF00367 phosphotransferase system, EIIB SEEM42N_RS16330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SEEM42N_RS16335 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SEEM42N_RS16340 PF01979 Amidohydrolase family SEEM42N_RS16345 PF00480 ROK family SEEM42N_RS16345 PF01047 MarR family SEEM42N_RS16350 PF13344 Haloacid dehalogenase-like hydrolase SEEM42N_RS16355 PF13537 Glutamine amidotransferase domain SEEM42N_RS16355 PF00733 Asparagine synthase SEEM42N_RS16390 PF01494 FAD binding domain SEEM42N_RS16395 PF04055 Radical SAM superfamily SEEM42N_RS16395 PF01938 TRAM domain SEEM42N_RS16395 PF00919 Uncharacterized protein family UPF0004 SEEM42N_RS16400 PF02562 PhoH-like protein SEEM42N_RS16405 PF02130 Uncharacterized protein family UPF0054 SEEM42N_RS16410 PF03471 Transporter associated domain SEEM42N_RS16410 PF00571 CBS domain SEEM42N_RS16415 PF00795 Carbon-nitrogen hydrolase SEEM42N_RS16420 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEM42N_RS16425 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS16430 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS16435 PF00005 ABC transporter SEEM42N_RS16440 PF01156 Inosine-uridine preferring nucleoside hydrolase SEEM42N_RS16445 PF07295 Zinc-ribbon containing domain SEEM42N_RS16450 PF00158 Sigma-54 interaction domain SEEM42N_RS16450 PF02954 Bacterial regulatory protein, Fis family SEEM42N_RS16450 PF00989 PAS fold SEEM42N_RS16455 PF03812 2-keto-3-deoxygluconate permease SEEM42N_RS16460 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SEEM42N_RS16470 PF08264 Anticodon-binding domain of tRNA SEEM42N_RS16470 PF00133 tRNA synthetases class I (I, L, M and V) SEEM42N_RS16470 PF13603 Leucyl-tRNA synthetase, Domain 2 SEEM42N_RS16475 PF04390 Lipopolysaccharide-assembly SEEM42N_RS16480 PF14840 Processivity clamp loader gamma complex DNA pol III C-term SEEM42N_RS16480 PF06144 DNA polymerase III, delta subunit SEEM42N_RS16485 PF01467 Cytidylyltransferase-like SEEM42N_RS16490 PF00155 Aminotransferase class I and II SEEM42N_RS16495 PF00300 Histidine phosphatase superfamily (branch 1) SEEM42N_RS16505 PF02590 Predicted SPOUT methyltransferase SEEM42N_RS16510 PF03717 Penicillin-binding Protein dimerisation domain SEEM42N_RS16510 PF00905 Penicillin binding protein transpeptidase domain SEEM42N_RS16515 PF01098 Cell cycle protein SEEM42N_RS16520 PF05036 Sporulation related domain SEEM42N_RS16520 PF03330 Lytic transglycolase SEEM42N_RS16525 PF07943 Penicillin-binding protein 5, C-terminal domain SEEM42N_RS16525 PF00768 D-alanyl-D-alanine carboxypeptidase SEEM42N_RS16530 PF04359 Protein of unknown function (DUF493) SEEM42N_RS16535 PF03099 Biotin/lipoate A/B protein ligase family SEEM42N_RS16540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS16540 PF03466 LysR substrate binding domain SEEM42N_RS16545 PF04055 Radical SAM superfamily SEEM42N_RS16545 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SEEM42N_RS16550 PF02416 mttA/Hcf106 family SEEM42N_RS16560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SEEM42N_RS16565 PF00313 'Cold-shock' DNA-binding domain SEEM42N_RS16570 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP SEEM42N_RS16575 PF03606 C4-dicarboxylate anaerobic carrier SEEM42N_RS16580 PF12431 Transcriptional regulator SEEM42N_RS16580 PF00072 Response regulator receiver domain SEEM42N_RS16585 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SEEM42N_RS16585 PF17203 Single cache domain 3 SEEM42N_RS16585 PF00989 PAS fold SEEM42N_RS16585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS16590 PF08218 Citrate lyase ligase C-terminal domain SEEM42N_RS16595 PF06857 Malonate decarboxylase delta subunit (MdcD) SEEM42N_RS16600 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEM42N_RS16605 PF04223 Citrate lyase, alpha subunit (CitF) SEEM42N_RS16610 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SEEM42N_RS16615 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SEEM42N_RS16620 PF00939 Sodium:sulfate symporter transmembrane region SEEM42N_RS16625 PF00445 Ribonuclease T2 family SEEM42N_RS16630 PF14760 Rnk N-terminus SEEM42N_RS16630 PF01272 Transcription elongation factor, GreA/GreB, C-term SEEM42N_RS16635 PF13823 Alcohol dehydrogenase GroES-associated SEEM42N_RS16635 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS16635 PF00107 Zinc-binding dehydrogenase SEEM42N_RS16640 PF00582 Universal stress protein family SEEM42N_RS16650 PF13247 4Fe-4S dicluster domain SEEM42N_RS16655 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS16655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEM42N_RS16655 PF00384 Molybdopterin oxidoreductase SEEM42N_RS16665 PF13192 Thioredoxin domain SEEM42N_RS16665 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS16670 PF10417 C-terminal domain of 1-Cys peroxiredoxin SEEM42N_RS16670 PF00578 AhpC/TSA family SEEM42N_RS16675 PF13098 Thioredoxin-like domain SEEM42N_RS16680 PF03466 LysR substrate binding domain SEEM42N_RS16680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS16685 PF01507 Phosphoadenosine phosphosulfate reductase family SEEM42N_RS16685 PF11922 Domain of unknown function (DUF3440) SEEM42N_RS16690 PF02195 ParB-like nuclease domain SEEM42N_RS16695 PF00155 Aminotransferase class I and II SEEM42N_RS16700 PF00465 Iron-containing alcohol dehydrogenase SEEM42N_RS16705 PF04328 Selenoprotein, putative SEEM42N_RS16710 PF13722 5TM C-terminal transporter carbon starvation CstA SEEM42N_RS16710 PF02554 Carbon starvation protein CstA SEEM42N_RS16715 PF03061 Thioesterase superfamily SEEM42N_RS16725 PF00550 Phosphopantetheine attachment site SEEM42N_RS16725 PF00857 Isochorismatase family SEEM42N_RS16730 PF13193 AMP-binding enzyme C-terminal domain SEEM42N_RS16730 PF00501 AMP-binding enzyme SEEM42N_RS16735 PF00425 chorismate binding enzyme SEEM42N_RS16740 PF01497 Periplasmic binding protein SEEM42N_RS16745 PF05977 Transmembrane secretion effector SEEM42N_RS16750 PF01032 FecCD transport family SEEM42N_RS16755 PF01032 FecCD transport family SEEM42N_RS16760 PF00005 ABC transporter SEEM42N_RS16765 PF02706 Chain length determinant protein SEEM42N_RS16770 PF13193 AMP-binding enzyme C-terminal domain SEEM42N_RS16770 PF00668 Condensation domain SEEM42N_RS16770 PF00550 Phosphopantetheine attachment site SEEM42N_RS16770 PF00975 Thioesterase domain SEEM42N_RS16770 PF00501 AMP-binding enzyme SEEM42N_RS16775 PF03621 MbtH-like protein SEEM42N_RS16780 PF00756 Putative esterase SEEM42N_RS16780 PF11806 Domain of unknown function (DUF3327) SEEM42N_RS16785 PF07715 TonB-dependent Receptor Plug Domain SEEM42N_RS16785 PF00593 TonB dependent receptor SEEM42N_RS16790 PF01648 4'-phosphopantetheinyl transferase superfamily SEEM42N_RS16790 PF17837 4'-phosphopantetheinyl transferase N-terminal domain SEEM42N_RS16795 PF04107 Glutamate-cysteine ligase family 2(GCS2) SEEM42N_RS16800 PF06643 Protein of unknown function (DUF1158) SEEM42N_RS16805 PF12833 Helix-turn-helix domain SEEM42N_RS16810 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS16810 PF16295 Tetracyclin repressor-like, C-terminal domain SEEM42N_RS16815 PF04237 YjbR SEEM42N_RS16820 PF00881 Nitroreductase family SEEM42N_RS16825 PF00657 GDSL-like Lipase/Acylhydrolase SEEM42N_RS16825 PF03797 Autotransporter beta-domain SEEM42N_RS16830 PF00924 Mechanosensitive ion channel SEEM42N_RS16835 PF00324 Amino acid permease SEEM42N_RS16845 PF04224 Protein of unknown function, DUF417 SEEM42N_RS16850 PF07338 Protein of unknown function (DUF1471) SEEM42N_RS16855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SEEM42N_RS16855 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS16860 PF12833 Helix-turn-helix domain SEEM42N_RS16860 PF12852 Cupin SEEM42N_RS16880 PF04138 GtrA-like protein SEEM42N_RS16885 PF00535 Glycosyl transferase family 2 SEEM42N_RS16915 PF04138 GtrA-like protein SEEM42N_RS16940 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS16955 PF00072 Response regulator receiver domain SEEM42N_RS16955 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS16960 PF00419 Fimbrial protein SEEM42N_RS16965 PF00419 Fimbrial protein SEEM42N_RS16970 PF00577 Outer membrane usher protein SEEM42N_RS16970 PF13954 PapC N-terminal domain SEEM42N_RS16970 PF13953 PapC C-terminal domain SEEM42N_RS16975 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS16975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS16985 PF00419 Fimbrial protein SEEM42N_RS16990 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SEEM42N_RS16990 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SEEM42N_RS17000 PF04307 LexA-binding, inner membrane-associated putative hydrolase SEEM42N_RS17015 PF01406 tRNA synthetases class I (C) catalytic domain SEEM42N_RS17015 PF09190 DALR domain SEEM42N_RS17020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SEEM42N_RS17025 PF12850 Calcineurin-like phosphoesterase superfamily domain SEEM42N_RS17030 PF00731 AIR carboxylase SEEM42N_RS17035 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SEEM42N_RS17035 PF02222 ATP-grasp domain SEEM42N_RS17040 PF00696 Amino acid kinase family SEEM42N_RS17045 PF11392 Protein of unknown function (DUF2877) SEEM42N_RS17050 PF06545 Protein of unknown function (DUF1116) SEEM42N_RS17055 PF02629 CoA binding domain SEEM42N_RS17055 PF00549 CoA-ligase SEEM42N_RS17060 PF02615 Malate/L-lactate dehydrogenase SEEM42N_RS17065 PF01546 Peptidase family M20/M25/M40 SEEM42N_RS17070 PF07883 Cupin domain SEEM42N_RS17070 PF05899 Protein of unknown function (DUF861) SEEM42N_RS17075 PF02595 Glycerate kinase family SEEM42N_RS17080 PF00860 Permease family SEEM42N_RS17085 PF01979 Amidohydrolase family SEEM42N_RS17090 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SEEM42N_RS17100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SEEM42N_RS17100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SEEM42N_RS17105 PF01261 Xylose isomerase-like TIM barrel SEEM42N_RS17110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEM42N_RS17110 PF00205 Thiamine pyrophosphate enzyme, central domain SEEM42N_RS17110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEM42N_RS17115 PF09339 IclR helix-turn-helix domain SEEM42N_RS17115 PF01614 Bacterial transcriptional regulator SEEM42N_RS17120 PF04115 Ureidoglycolate lyase SEEM42N_RS17125 PF03466 LysR substrate binding domain SEEM42N_RS17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS17135 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS17140 PF09383 NIL domain SEEM42N_RS17140 PF00005 ABC transporter SEEM42N_RS17145 PF03180 NLPA lipoprotein SEEM42N_RS17160 PF00005 ABC transporter SEEM42N_RS17165 PF13472 GDSL-like Lipase/Acylhydrolase family SEEM42N_RS17170 PF00106 short chain dehydrogenase SEEM42N_RS17175 PF00085 Thioredoxin SEEM42N_RS17180 PF03649 Uncharacterised protein family (UPF0014) SEEM42N_RS17185 PF00005 ABC transporter SEEM42N_RS17190 PF16200 C-terminal region of band_7 SEEM42N_RS17190 PF01145 SPFH domain / Band 7 family SEEM42N_RS17195 PF01957 NfeD-like C-terminal, partner-binding SEEM42N_RS17200 PF13411 MerR HTH family regulatory protein SEEM42N_RS17205 PF00403 Heavy-metal-associated domain SEEM42N_RS17215 PF01963 TraB family SEEM42N_RS17220 PF04073 Aminoacyl-tRNA editing domain SEEM42N_RS17225 PF00149 Calcineurin-like phosphoesterase SEEM42N_RS17225 PF02872 5'-nucleotidase, C-terminal domain SEEM42N_RS17230 PF07690 Major Facilitator Superfamily SEEM42N_RS17235 PF02254 TrkA-N domain SEEM42N_RS17235 PF00999 Sodium/hydrogen exchanger family SEEM42N_RS17240 PF00294 pfkB family carbohydrate kinase SEEM42N_RS17245 PF07859 alpha/beta hydrolase fold SEEM42N_RS17250 PF00762 Ferrochelatase SEEM42N_RS17255 PF05191 Adenylate kinase, active site lid SEEM42N_RS17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS17260 PF00183 Hsp90 protein SEEM42N_RS17265 PF02132 RecR protein SEEM42N_RS17265 PF13662 Toprim domain SEEM42N_RS17270 PF02575 YbaB/EbfC DNA-binding family SEEM42N_RS17275 PF12170 DNA polymerase III tau subunit V interacting with alpha SEEM42N_RS17275 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SEEM42N_RS17275 PF12169 DNA polymerase III subunits gamma and tau domain III SEEM42N_RS17280 PF00156 Phosphoribosyl transferase domain SEEM42N_RS17285 PF04304 Protein of unknown function (DUF454) SEEM42N_RS17290 PF07445 Primosomal replication protein priC SEEM42N_RS17295 PF10689 Protein of unknown function (DUF2496) SEEM42N_RS17300 PF04754 Putative transposase, YhgA-like SEEM42N_RS17305 PF12794 Mechanosensitive ion channel inner membrane domain 1 SEEM42N_RS17305 PF12795 Mechanosensitive ion channel porin domain SEEM42N_RS17305 PF00924 Mechanosensitive ion channel SEEM42N_RS17310 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS17310 PF08361 MAATS-type transcriptional repressor, C-terminal region SEEM42N_RS17315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEM42N_RS17315 PF00529 HlyD membrane-fusion protein of T1SS SEEM42N_RS17320 PF00873 AcrB/AcrD/AcrF family SEEM42N_RS17325 PF10757 Biofilm formation regulator YbaJ SEEM42N_RS17330 PF05321 Haemolysin expression modulating protein SEEM42N_RS17335 PF14602 Hexapeptide repeat of succinyl-transferase SEEM42N_RS17335 PF12464 Maltose acetyltransferase SEEM42N_RS17340 PF10777 Inner membrane protein YlaC SEEM42N_RS17345 PF00444 Ribosomal protein L36 SEEM42N_RS17350 PF01197 Ribosomal protein L31 SEEM42N_RS17355 PF00563 EAL domain SEEM42N_RS17355 PF12792 CSS motif domain associated with EAL SEEM42N_RS17365 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SEEM42N_RS17370 PF09619 Type III secretion system lipoprotein chaperone (YscW) SEEM42N_RS17380 PF00909 Ammonium Transporter Family SEEM42N_RS17385 PF00543 Nitrogen regulatory protein P-II SEEM42N_RS17390 PF00664 ABC transporter transmembrane region SEEM42N_RS17390 PF00005 ABC transporter SEEM42N_RS17395 PF00664 ABC transporter transmembrane region SEEM42N_RS17395 PF00005 ABC transporter SEEM42N_RS17400 PF01037 Lrp/AsnC ligand binding domain SEEM42N_RS17400 PF13404 AsnC-type helix-turn-helix domain SEEM42N_RS17415 PF12793 Sugar transport-related sRNA regulator N-term SEEM42N_RS17415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEM42N_RS17420 PF06508 Queuosine biosynthesis protein QueC SEEM42N_RS17435 PF13145 PPIC-type PPIASE domain SEEM42N_RS17440 PF00216 Bacterial DNA-binding protein SEEM42N_RS17445 PF02190 ATP-dependent protease La (LON) substrate-binding domain SEEM42N_RS17445 PF05362 Lon protease (S16) C-terminal proteolytic domain SEEM42N_RS17445 PF00004 ATPase family associated with various cellular activities (AAA) SEEM42N_RS17450 PF06689 ClpX C4-type zinc finger SEEM42N_RS17450 PF10431 C-terminal, D2-small domain, of ClpB protein SEEM42N_RS17450 PF07724 AAA domain (Cdc48 subfamily) SEEM42N_RS17455 PF00574 Clp protease SEEM42N_RS17460 PF05697 Bacterial trigger factor protein (TF) SEEM42N_RS17460 PF05698 Bacterial trigger factor protein (TF) C-terminus SEEM42N_RS17460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SEEM42N_RS17465 PF01722 BolA-like protein SEEM42N_RS17470 PF03923 Uncharacterized lipoprotein SEEM42N_RS17470 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SEEM42N_RS17475 PF07690 Major Facilitator Superfamily SEEM42N_RS17480 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SEEM42N_RS17480 PF06481 COX Aromatic Rich Motif SEEM42N_RS17485 PF00115 Cytochrome C and Quinol oxidase polypeptide I SEEM42N_RS17490 PF00510 Cytochrome c oxidase subunit III SEEM42N_RS17495 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SEEM42N_RS17500 PF01040 UbiA prenyltransferase family SEEM42N_RS17505 PF07690 Major Facilitator Superfamily SEEM42N_RS17510 PF04461 Protein of unknown function (DUF520) SEEM42N_RS17515 PF08546 Ketopantoate reductase PanE/ApbA C terminal SEEM42N_RS17515 PF02558 Ketopantoate reductase PanE/ApbA SEEM42N_RS17520 PF01965 DJ-1/PfpI family SEEM42N_RS17530 PF00266 Aminotransferase class-V SEEM42N_RS17535 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS17535 PF07702 UTRA domain SEEM42N_RS17540 PF01547 Bacterial extracellular solute-binding protein SEEM42N_RS17545 PF00005 ABC transporter SEEM42N_RS17545 PF08402 TOBE domain SEEM42N_RS17550 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS17555 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS17560 PF02926 THUMP domain SEEM42N_RS17560 PF02568 Thiamine biosynthesis protein (ThiI) SEEM42N_RS17565 PF02609 Exonuclease VII small subunit SEEM42N_RS17570 PF00348 Polyprenyl synthetase SEEM42N_RS17575 PF02779 Transketolase, pyrimidine binding domain SEEM42N_RS17575 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SEEM42N_RS17575 PF02780 Transketolase, C-terminal domain SEEM42N_RS17580 PF00248 Aldo/keto reductase family SEEM42N_RS17585 PF04608 Phosphatidylglycerophosphatase A SEEM42N_RS17590 PF02769 AIR synthase related protein, C-terminal domain SEEM42N_RS17590 PF00586 AIR synthase related protein, N-terminal domain SEEM42N_RS17595 PF01029 NusB family SEEM42N_RS17600 PF00885 6,7-dimethyl-8-ribityllumazine synthase SEEM42N_RS17605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SEEM42N_RS17605 PF01872 RibD C-terminal domain SEEM42N_RS17610 PF03477 ATP cone domain SEEM42N_RS17615 PF11622 Protein of unknown function (DUF3251) SEEM42N_RS17620 PF03502 Nucleoside-specific channel-forming protein, Tsx SEEM42N_RS17630 PF01844 HNH endonuclease SEEM42N_RS17635 PF02355 Protein export membrane protein SEEM42N_RS17635 PF07549 SecD/SecF GG Motif SEEM42N_RS17640 PF07549 SecD/SecF GG Motif SEEM42N_RS17640 PF13721 SecD export protein N-terminal TM region SEEM42N_RS17640 PF02355 Protein export membrane protein SEEM42N_RS17645 PF02699 Preprotein translocase subunit SEEM42N_RS17650 PF01702 Queuine tRNA-ribosyltransferase SEEM42N_RS17655 PF02547 Queuosine biosynthesis protein SEEM42N_RS17660 PF04336 Acyl carrier protein phosphodiesterase SEEM42N_RS17665 PF10417 C-terminal domain of 1-Cys peroxiredoxin SEEM42N_RS17665 PF00578 AhpC/TSA family SEEM42N_RS17670 PF02903 Alpha amylase, N-terminal ig-like domain SEEM42N_RS17670 PF00128 Alpha amylase, catalytic domain SEEM42N_RS17675 PF00324 Amino acid permease SEEM42N_RS17680 PF05525 Branched-chain amino acid transport protein SEEM42N_RS17685 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS17685 PF11808 Phosphate regulon sensor protein PhoR SEEM42N_RS17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS17685 PF00989 PAS fold SEEM42N_RS17690 PF00072 Response regulator receiver domain SEEM42N_RS17690 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS17695 PF00149 Calcineurin-like phosphoesterase SEEM42N_RS17695 PF12320 Type 5 capsule protein repressor C-terminal domain SEEM42N_RS17700 PF13476 AAA domain SEEM42N_RS17705 PF07690 Major Facilitator Superfamily SEEM42N_RS17710 PF00480 ROK family SEEM42N_RS17715 PF04381 Putative exonuclease, RdgC SEEM42N_RS17720 PF06865 Pyrimidine/purine nucleoside phosphorylase SEEM42N_RS17725 PF07302 AroM protein SEEM42N_RS17730 PF16362 YaiA protein SEEM42N_RS17735 PF01202 Shikimate kinase SEEM42N_RS17740 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SEEM42N_RS17745 PF03807 NADP oxidoreductase coenzyme F420-dependent SEEM42N_RS17745 PF14748 Pyrroline-5-carboxylate reductase dimerisation SEEM42N_RS17750 PF05230 MASE2 domain SEEM42N_RS17750 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS17755 PF07769 psiF repeat SEEM42N_RS17760 PF10796 Sigma-S stabilisation anti-adaptor protein SEEM42N_RS17765 PF07690 Major Facilitator Superfamily SEEM42N_RS17775 PF07478 D-ala D-ala ligase C-terminus SEEM42N_RS17775 PF01820 D-ala D-ala ligase N-terminus SEEM42N_RS17780 PF10953 Protein of unknown function (DUF2754) SEEM42N_RS17785 PF10954 Protein of unknown function (DUF2755) SEEM42N_RS17790 PF07759 Protein of unknown function (DUF1615) SEEM42N_RS17795 PF05992 SbmA/BacA-like family SEEM42N_RS17800 PF00144 Beta-lactamase SEEM42N_RS17805 PF15977 Winged helix-turn-helix DNA binding SEEM42N_RS17810 PF03797 Autotransporter beta-domain SEEM42N_RS17815 PF00490 Delta-aminolevulinic acid dehydratase SEEM42N_RS17820 PF16177 Acetyl-coenzyme A synthetase N-terminus SEEM42N_RS17820 PF00501 AMP-binding enzyme SEEM42N_RS17820 PF13193 AMP-binding enzyme C-terminal domain SEEM42N_RS17825 PF03972 MmgE/PrpD family SEEM42N_RS17830 PF00285 Citrate synthase, C-terminal domain SEEM42N_RS17840 PF02954 Bacterial regulatory protein, Fis family SEEM42N_RS17840 PF06506 Propionate catabolism activator SEEM42N_RS17840 PF00158 Sigma-54 interaction domain SEEM42N_RS17845 PF07338 Protein of unknown function (DUF1471) SEEM42N_RS17850 PF01810 LysE type translocator SEEM42N_RS17855 PF00593 TonB dependent receptor SEEM42N_RS17855 PF07715 TonB-dependent Receptor Plug Domain SEEM42N_RS17870 PF02322 Cytochrome bd terminal oxidase subunit II SEEM42N_RS17875 PF01654 Cytochrome bd terminal oxidase subunit I SEEM42N_RS17885 PF04851 Type III restriction enzyme, res subunit SEEM42N_RS17885 PF08774 VRR-NUC domain SEEM42N_RS17890 PF18273 Type III R-M EcoP15I C-terminal domain SEEM42N_RS17890 PF01555 DNA methylase SEEM42N_RS17895 PF07690 Major Facilitator Superfamily SEEM42N_RS17905 PF00376 MerR family regulatory protein SEEM42N_RS17905 PF09278 MerR, DNA binding SEEM42N_RS17910 PF00403 Heavy-metal-associated domain SEEM42N_RS17915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SEEM42N_RS17920 PF00873 AcrB/AcrD/AcrF family SEEM42N_RS17925 PF02321 Outer membrane efflux protein SEEM42N_RS17945 PF13505 Outer membrane protein beta-barrel domain SEEM42N_RS17960 PF12792 CSS motif domain associated with EAL SEEM42N_RS17960 PF00563 EAL domain SEEM42N_RS17975 PF16970 Type-1 fimbrial protein, A SEEM42N_RS17980 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS17980 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS17985 PF13953 PapC C-terminal domain SEEM42N_RS17985 PF13954 PapC N-terminal domain SEEM42N_RS17985 PF00577 Outer membrane usher protein SEEM42N_RS17995 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS17995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS18010 PF00171 Aldehyde dehydrogenase family SEEM42N_RS18015 PF01472 PUA domain SEEM42N_RS18015 PF00696 Amino acid kinase family SEEM42N_RS18020 PF00267 Gram-negative porin SEEM42N_RS18025 PF07417 Sigma factor-binding transcriptional regulator Crl SEEM42N_RS18030 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) SEEM42N_RS18035 PF00156 Phosphoribosyl transferase domain SEEM42N_RS18040 PF07687 Peptidase dimerisation domain SEEM42N_RS18040 PF01546 Peptidase family M20/M25/M40 SEEM42N_RS18045 PF00472 RF-1 domain SEEM42N_RS18055 PF11798 IMS family HHH motif SEEM42N_RS18055 PF11799 impB/mucB/samB family C-terminal domain SEEM42N_RS18055 PF00817 impB/mucB/samB family SEEM42N_RS18060 PF03734 L,D-transpeptidase catalytic domain SEEM42N_RS18065 PF13230 Glutamine amidotransferases class-II SEEM42N_RS18070 PF13580 SIS domain SEEM42N_RS18075 PF02770 Acyl-CoA dehydrogenase, middle domain SEEM42N_RS18075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SEEM42N_RS18075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SEEM42N_RS18075 PF09317 Domain of unknown function (DUF1974) SEEM42N_RS18080 PF00795 Carbon-nitrogen hydrolase SEEM42N_RS18090 PF13505 Outer membrane protein beta-barrel domain SEEM42N_RS18105 PF13404 AsnC-type helix-turn-helix domain SEEM42N_RS18105 PF01037 Lrp/AsnC ligand binding domain SEEM42N_RS18145 PF03466 LysR substrate binding domain SEEM42N_RS18145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS18165 PF13953 PapC C-terminal domain SEEM42N_RS18165 PF00577 Outer membrane usher protein SEEM42N_RS18165 PF13954 PapC N-terminal domain SEEM42N_RS18170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS18170 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS18195 PF03527 RHS protein SEEM42N_RS18205 PF16671 Actin cross-linking domain SEEM42N_RS18205 PF04717 Type VI secretion system, phage-baseplate injector SEEM42N_RS18225 PF03527 RHS protein SEEM42N_RS18225 PF05593 RHS Repeat SEEM42N_RS18235 PF16671 Actin cross-linking domain SEEM42N_RS18235 PF04717 Type VI secretion system, phage-baseplate injector SEEM42N_RS18285 PF00691 OmpA family SEEM42N_RS18285 PF05736 OprF membrane domain SEEM42N_RS18345 PF10431 C-terminal, D2-small domain, of ClpB protein SEEM42N_RS18345 PF00004 ATPase family associated with various cellular activities (AAA) SEEM42N_RS18345 PF17871 AAA lid domain SEEM42N_RS18345 PF07724 AAA domain (Cdc48 subfamily) SEEM42N_RS18385 PF00929 Exonuclease SEEM42N_RS18390 PF00075 RNase H SEEM42N_RS18395 PF08241 Methyltransferase domain SEEM42N_RS18400 PF00753 Metallo-beta-lactamase superfamily SEEM42N_RS18400 PF16123 Hydroxyacylglutathione hydrolase C-terminus SEEM42N_RS18405 PF01464 Transglycosylase SLT domain SEEM42N_RS18405 PF01476 LysM domain SEEM42N_RS18410 PF08241 Methyltransferase domain SEEM42N_RS18415 PF03372 Endonuclease/Exonuclease/phosphatase family SEEM42N_RS18420 PF07690 Major Facilitator Superfamily SEEM42N_RS18425 PF03466 LysR substrate binding domain SEEM42N_RS18425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS18430 PF00248 Aldo/keto reductase family SEEM42N_RS18470 PF09383 NIL domain SEEM42N_RS18470 PF00005 ABC transporter SEEM42N_RS18475 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS18480 PF03180 NLPA lipoprotein SEEM42N_RS18485 PF16358 RcsF lipoprotein SEEM42N_RS18490 PF01980 tRNA-methyltransferase O SEEM42N_RS18490 PF18389 TrmO C-terminal domain SEEM42N_RS18495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SEEM42N_RS18495 PF03129 Anticodon binding domain SEEM42N_RS18495 PF04073 Aminoacyl-tRNA editing domain SEEM42N_RS18500 PF04170 NlpE N-terminal domain SEEM42N_RS18500 PF17185 NlpE C-terminal OB domain SEEM42N_RS18505 PF00472 RF-1 domain SEEM42N_RS18510 PF07152 YaeQ protein SEEM42N_RS18515 PF06786 Uncharacterised protein family (UPF0253) SEEM42N_RS18520 PF07073 Modulator of Rho-dependent transcription termination (ROF) SEEM42N_RS18525 PF01171 PP-loop family SEEM42N_RS18525 PF09179 TilS substrate binding domain SEEM42N_RS18525 PF11734 TilS substrate C-terminal domain SEEM42N_RS18530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SEEM42N_RS18545 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SEEM42N_RS18550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SEEM42N_RS18550 PF14579 Helix-hairpin-helix motif SEEM42N_RS18550 PF02811 PHP domain SEEM42N_RS18550 PF07733 Bacterial DNA polymerase III alpha NTPase domain SEEM42N_RS18550 PF01336 OB-fold nucleic acid binding domain SEEM42N_RS18555 PF01351 Ribonuclease HII SEEM42N_RS18560 PF02684 Lipid-A-disaccharide synthetase SEEM42N_RS18565 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SEEM42N_RS18565 PF00132 Bacterial transferase hexapeptide (six repeats) SEEM42N_RS18570 PF07977 FabA-like domain SEEM42N_RS18575 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SEEM42N_RS18575 PF00132 Bacterial transferase hexapeptide (six repeats) SEEM42N_RS18580 PF03938 Outer membrane protein (OmpH-like) SEEM42N_RS18585 PF07244 Surface antigen variable number repeat SEEM42N_RS18585 PF01103 Surface antigen SEEM42N_RS18590 PF17820 PDZ domain SEEM42N_RS18590 PF02163 Peptidase family M50 SEEM42N_RS18600 PF01255 Putative undecaprenyl diphosphate synthase SEEM42N_RS18605 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SEEM42N_RS18605 PF13288 DXP reductoisomerase C-terminal domain SEEM42N_RS18605 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SEEM42N_RS18610 PF01765 Ribosome recycling factor SEEM42N_RS18615 PF00696 Amino acid kinase family SEEM42N_RS18620 PF00889 Elongation factor TS SEEM42N_RS18625 PF00318 Ribosomal protein S2 SEEM42N_RS18630 PF00557 Metallopeptidase family M24 SEEM42N_RS18635 PF08335 GlnD PII-uridylyltransferase SEEM42N_RS18635 PF01966 HD domain SEEM42N_RS18635 PF01842 ACT domain SEEM42N_RS18635 PF01909 Nucleotidyltransferase domain SEEM42N_RS18640 PF00132 Bacterial transferase hexapeptide (six repeats) SEEM42N_RS18640 PF14602 Hexapeptide repeat of succinyl-transferase SEEM42N_RS18640 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SEEM42N_RS18645 PF07690 Major Facilitator Superfamily SEEM42N_RS18645 PF00083 Sugar (and other) transporter SEEM42N_RS18650 PF11944 Protein of unknown function (DUF3461) SEEM42N_RS18660 PF13556 PucR C-terminal helix-turn-helix domain SEEM42N_RS18660 PF05651 Putative sugar diacid recognition SEEM42N_RS18660 PF17853 GGDEF-like domain SEEM42N_RS18665 PF00595 PDZ domain SEEM42N_RS18670 PF13286 Phosphohydrolase-associated domain SEEM42N_RS18670 PF01966 HD domain SEEM42N_RS18675 PF01048 Phosphorylase superfamily SEEM42N_RS18680 PF01497 Periplasmic binding protein SEEM42N_RS18685 PF03458 UPF0126 domain SEEM42N_RS18690 PF01521 Iron-sulphur cluster biosynthesis SEEM42N_RS18695 PF00654 Voltage gated chloride channel SEEM42N_RS18700 PF00202 Aminotransferase class-III SEEM42N_RS18705 PF01032 FecCD transport family SEEM42N_RS18710 PF01497 Periplasmic binding protein SEEM42N_RS18715 PF00005 ABC transporter SEEM42N_RS18720 PF07715 TonB-dependent Receptor Plug Domain SEEM42N_RS18720 PF00593 TonB dependent receptor SEEM42N_RS18725 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal SEEM42N_RS18725 PF14814 Bifunctional transglycosylase second domain SEEM42N_RS18725 PF00905 Penicillin binding protein transpeptidase domain SEEM42N_RS18725 PF00912 Transglycosylase SEEM42N_RS18730 PF04408 Helicase associated domain (HA2) SEEM42N_RS18730 PF08482 ATP-dependent helicase C-terminal SEEM42N_RS18730 PF00271 Helicase conserved C-terminal domain SEEM42N_RS18730 PF00270 DEAD/DEAH box helicase SEEM42N_RS18735 PF02834 LigT like Phosphoesterase SEEM42N_RS18740 PF03749 Sugar fermentation stimulation protein RE domain SEEM42N_RS18740 PF17746 SfsA N-terminal OB domain SEEM42N_RS18745 PF01258 Prokaryotic dksA/traR C4-type zinc finger SEEM42N_RS18750 PF00749 tRNA synthetases class I (E and Q), catalytic domain SEEM42N_RS18755 PF12627 Probable RNA and SrmB- binding site of polymerase A SEEM42N_RS18755 PF12626 Polymerase A arginine-rich C-terminus SEEM42N_RS18755 PF01743 Poly A polymerase head domain SEEM42N_RS18760 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SEEM42N_RS18770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS18770 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS18775 PF13954 PapC N-terminal domain SEEM42N_RS18775 PF13953 PapC C-terminal domain SEEM42N_RS18775 PF00577 Outer membrane usher protein SEEM42N_RS18780 PF00419 Fimbrial protein SEEM42N_RS18785 PF00419 Fimbrial protein SEEM42N_RS18790 PF00419 Fimbrial protein SEEM42N_RS18795 PF00419 Fimbrial protein SEEM42N_RS18800 PF02548 Ketopantoate hydroxymethyltransferase SEEM42N_RS18805 PF02569 Pantoate-beta-alanine ligase SEEM42N_RS18810 PF02261 Aspartate decarboxylase SEEM42N_RS18815 PF01522 Polysaccharide deacetylase SEEM42N_RS18820 PF03610 PTS system fructose IIA component SEEM42N_RS18830 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS18830 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS18835 PF13953 PapC C-terminal domain SEEM42N_RS18835 PF13954 PapC N-terminal domain SEEM42N_RS18835 PF00577 Outer membrane usher protein SEEM42N_RS18840 PF00419 Fimbrial protein SEEM42N_RS18845 PF01061 ABC-2 type transporter SEEM42N_RS18850 PF00005 ABC transporter SEEM42N_RS18855 PF00484 Carbonic anhydrase SEEM42N_RS18860 PF00156 Phosphoribosyl transferase domain SEEM42N_RS18865 PF01011 PQQ enzyme repeat SEEM42N_RS18870 PF07731 Multicopper oxidase SEEM42N_RS18870 PF00394 Multicopper oxidase SEEM42N_RS18870 PF07732 Multicopper oxidase SEEM42N_RS18875 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) SEEM42N_RS18880 PF17284 Spermidine synthase tetramerisation domain SEEM42N_RS18885 PF02675 S-adenosylmethionine decarboxylase SEEM42N_RS18890 PF00455 DeoR C terminal sensor domain SEEM42N_RS18890 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS18895 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SEEM42N_RS18900 PF07005 Sugar-binding N-terminal domain SEEM42N_RS18900 PF17042 Nucleotide-binding C-terminal domain SEEM42N_RS18905 PF03812 2-keto-3-deoxygluconate permease SEEM42N_RS18910 PF06062 Uncharacterised protein family (UPF0231) SEEM42N_RS18915 PF00330 Aconitase family (aconitate hydratase) SEEM42N_RS18915 PF06434 Aconitate hydratase 2 N-terminus SEEM42N_RS18915 PF11791 Aconitate B N-terminal domain SEEM42N_RS18920 PF11737 Protein of unknown function (DUF3300) SEEM42N_RS18935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SEEM42N_RS18935 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS18940 PF02817 e3 binding domain SEEM42N_RS18940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SEEM42N_RS18940 PF00364 Biotin-requiring enzyme SEEM42N_RS18945 PF00456 Transketolase, thiamine diphosphate binding domain SEEM42N_RS18945 PF17831 Pyruvate dehydrogenase E1 component middle domain SEEM42N_RS18950 PF07729 FCD domain SEEM42N_RS18950 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS18955 PF00324 Amino acid permease SEEM42N_RS18965 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain SEEM42N_RS18965 PF04616 Glycosyl hydrolases family 43 SEEM42N_RS18970 PF17113 Regulatory signalling modulator protein AmpE SEEM42N_RS18975 PF01510 N-acetylmuramoyl-L-alanine amidase SEEM42N_RS18980 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SEEM42N_RS18980 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SEEM42N_RS18985 PF07963 Prokaryotic N-terminal methylation motif SEEM42N_RS18990 PF00437 Type II/IV secretion system protein SEEM42N_RS18990 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SEEM42N_RS18995 PF00482 Type II secretion system (T2SS), protein F SEEM42N_RS19000 PF00478 IMP dehydrogenase / GMP reductase domain SEEM42N_RS19005 PF01121 Dephospho-CoA kinase SEEM42N_RS19010 PF07072 Cell division protein SEEM42N_RS19015 PF03884 DNA gyrase inhibitor YacG SEEM42N_RS19020 PF00293 NUDIX domain SEEM42N_RS19025 PF02810 SEC-C motif SEEM42N_RS19025 PF07517 SecA DEAD-like domain SEEM42N_RS19025 PF07516 SecA Wing and Scaffold domain SEEM42N_RS19025 PF01043 SecA preprotein cross-linking domain SEEM42N_RS19030 PF06558 Secretion monitor precursor protein (SecM) SEEM42N_RS19035 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SEEM42N_RS19040 PF12327 FtsZ family, C-terminal domain SEEM42N_RS19040 PF00091 Tubulin/FtsZ family, GTPase domain SEEM42N_RS19045 PF02491 SHS2 domain inserted in FTSA SEEM42N_RS19050 PF03799 Cell division protein FtsQ SEEM42N_RS19050 PF08478 POTRA domain, FtsQ-type SEEM42N_RS19055 PF01820 D-ala D-ala ligase N-terminus SEEM42N_RS19055 PF07478 D-ala D-ala ligase C-terminus SEEM42N_RS19060 PF02875 Mur ligase family, glutamate ligase domain SEEM42N_RS19060 PF08245 Mur ligase middle domain SEEM42N_RS19060 PF01225 Mur ligase family, catalytic domain SEEM42N_RS19065 PF03033 Glycosyltransferase family 28 N-terminal domain SEEM42N_RS19065 PF04101 Glycosyltransferase family 28 C-terminal domain SEEM42N_RS19070 PF01098 Cell cycle protein SEEM42N_RS19075 PF02875 Mur ligase family, glutamate ligase domain SEEM42N_RS19075 PF08245 Mur ligase middle domain SEEM42N_RS19080 PF00953 Glycosyl transferase family 4 SEEM42N_RS19080 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SEEM42N_RS19085 PF08245 Mur ligase middle domain SEEM42N_RS19085 PF02875 Mur ligase family, glutamate ligase domain SEEM42N_RS19085 PF01225 Mur ligase family, catalytic domain SEEM42N_RS19090 PF01225 Mur ligase family, catalytic domain SEEM42N_RS19090 PF02875 Mur ligase family, glutamate ligase domain SEEM42N_RS19090 PF08245 Mur ligase middle domain SEEM42N_RS19095 PF00905 Penicillin binding protein transpeptidase domain SEEM42N_RS19095 PF03717 Penicillin-binding Protein dimerisation domain SEEM42N_RS19100 PF04999 Cell division protein FtsL SEEM42N_RS19105 PF01795 MraW methylase family SEEM42N_RS19110 PF02381 MraZ protein, putative antitoxin-like SEEM42N_RS19115 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS19115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SEEM42N_RS19120 PF10369 Small subunit of acetolactate synthase SEEM42N_RS19125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEM42N_RS19125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEM42N_RS19125 PF00205 Thiamine pyrophosphate enzyme, central domain SEEM42N_RS19130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS19130 PF03466 LysR substrate binding domain SEEM42N_RS19135 PF08054 Leucine operon leader peptide SEEM42N_RS19140 PF08502 LeuA allosteric (dimerisation) domain SEEM42N_RS19140 PF00682 HMGL-like SEEM42N_RS19145 PF00180 Isocitrate/isopropylmalate dehydrogenase SEEM42N_RS19150 PF00330 Aconitase family (aconitate hydratase) SEEM42N_RS19155 PF00694 Aconitase C-terminal domain SEEM42N_RS19165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SEEM42N_RS19165 PF12793 Sugar transport-related sRNA regulator N-term SEEM42N_RS19175 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS19180 PF00005 ABC transporter SEEM42N_RS19185 PF09335 SNARE associated Golgi protein SEEM42N_RS19190 PF02311 AraC-like ligand binding domain SEEM42N_RS19190 PF12833 Helix-turn-helix domain SEEM42N_RS19195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEM42N_RS19200 PF02610 L-arabinose isomerase SEEM42N_RS19200 PF11762 L-arabinose isomerase C-terminal domain SEEM42N_RS19205 PF00596 Class II Aldolase and Adducin N-terminal domain SEEM42N_RS19225 PF03104 DNA polymerase family B, exonuclease domain SEEM42N_RS19225 PF00136 DNA polymerase family B SEEM42N_RS19230 PF00176 SNF2 family N-terminal domain SEEM42N_RS19230 PF00271 Helicase conserved C-terminal domain SEEM42N_RS19230 PF18339 RapA N-terminal Tudor like domain 1 SEEM42N_RS19230 PF18337 RapA N-terminal Tudor like domain SEEM42N_RS19230 PF12137 RNA polymerase recycling family C-terminal SEEM42N_RS19235 PF00849 RNA pseudouridylate synthase SEEM42N_RS19240 PF00226 DnaJ domain SEEM42N_RS19240 PF05099 Tellurite resistance protein TerB SEEM42N_RS19245 PF04453 LPS transport system D SEEM42N_RS19245 PF03968 OstA-like protein SEEM42N_RS19250 PF09312 SurA N-terminal domain SEEM42N_RS19250 PF00639 PPIC-type PPIASE domain SEEM42N_RS19255 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SEEM42N_RS19260 PF00398 Ribosomal RNA adenine dimethylase SEEM42N_RS19265 PF04379 ApaG domain SEEM42N_RS19270 PF00149 Calcineurin-like phosphoesterase SEEM42N_RS19275 PF00186 Dihydrofolate reductase SEEM42N_RS19280 PF02254 TrkA-N domain SEEM42N_RS19280 PF00999 Sodium/hydrogen exchanger family SEEM42N_RS19285 PF02525 Flavodoxin-like fold SEEM42N_RS19290 PF00884 Sulfatase SEEM42N_RS19305 PF06004 Bacterial protein of unknown function (DUF903) SEEM42N_RS19310 PF00083 Sugar (and other) transporter SEEM42N_RS19320 PF01494 FAD binding domain SEEM42N_RS19325 PF01012 Electron transfer flavoprotein domain SEEM42N_RS19325 PF00766 Electron transfer flavoprotein FAD-binding domain SEEM42N_RS19330 PF01012 Electron transfer flavoprotein domain SEEM42N_RS19335 PF02028 BCCT, betaine/carnitine/choline family transporter SEEM42N_RS19340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SEEM42N_RS19340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SEEM42N_RS19340 PF02770 Acyl-CoA dehydrogenase, middle domain SEEM42N_RS19345 PF02515 CoA-transferase family III SEEM42N_RS19350 PF13193 AMP-binding enzyme C-terminal domain SEEM42N_RS19350 PF00501 AMP-binding enzyme SEEM42N_RS19355 PF00378 Enoyl-CoA hydratase/isomerase SEEM42N_RS19360 PF00132 Bacterial transferase hexapeptide (six repeats) SEEM42N_RS19365 PF07180 CaiF/GrlA transcriptional regulator SEEM42N_RS19370 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SEEM42N_RS19370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SEEM42N_RS19370 PF02142 MGS-like domain SEEM42N_RS19375 PF00117 Glutamine amidotransferase class-I SEEM42N_RS19375 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SEEM42N_RS19395 PF05173 Dihydrodipicolinate reductase, C-terminus SEEM42N_RS19395 PF01113 Dihydrodipicolinate reductase, N-terminus SEEM42N_RS19400 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SEEM42N_RS19405 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SEEM42N_RS19410 PF04223 Citrate lyase, alpha subunit (CitF) SEEM42N_RS19415 PF03328 HpcH/HpaI aldolase/citrate lyase family SEEM42N_RS19420 PF06857 Malonate decarboxylase delta subunit (MdcD) SEEM42N_RS19425 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS19425 PF08218 Citrate lyase ligase C-terminal domain SEEM42N_RS19430 PF03390 2-hydroxycarboxylate transporter family SEEM42N_RS19435 PF04277 Oxaloacetate decarboxylase, gamma chain SEEM42N_RS19440 PF00682 HMGL-like SEEM42N_RS19440 PF00364 Biotin-requiring enzyme SEEM42N_RS19440 PF02436 Conserved carboxylase domain SEEM42N_RS19445 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SEEM42N_RS19450 PF17203 Single cache domain 3 SEEM42N_RS19450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS19455 PF00072 Response regulator receiver domain SEEM42N_RS19455 PF12431 Transcriptional regulator SEEM42N_RS19460 PF01156 Inosine-uridine preferring nucleoside hydrolase SEEM42N_RS19470 PF02401 LytB protein SEEM42N_RS19475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SEEM42N_RS19480 PF01252 Signal peptidase (SPase) II SEEM42N_RS19485 PF08264 Anticodon-binding domain of tRNA SEEM42N_RS19485 PF06827 Zinc finger found in FPG and IleRS SEEM42N_RS19485 PF00133 tRNA synthetases class I (I, L, M and V) SEEM42N_RS19490 PF06574 FAD synthetase SEEM42N_RS19490 PF01687 Riboflavin kinase SEEM42N_RS19495 PF10837 Protein of unknown function (DUF2575) SEEM42N_RS19500 PF01649 Ribosomal protein S20 SEEM42N_RS19510 PF01055 Glycosyl hydrolases family 31 SEEM42N_RS19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS19515 PF03466 LysR substrate binding domain SEEM42N_RS19520 PF06965 Na+/H+ antiporter 1 SEEM42N_RS19540 PF13186 Iron-sulfur cluster-binding domain SEEM42N_RS19540 PF04055 Radical SAM superfamily SEEM42N_RS19545 PF16385 Domain of unknown function SEEM42N_RS19545 PF00884 Sulfatase SEEM42N_RS19580 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS19580 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS19585 PF16970 Type-1 fimbrial protein, A SEEM42N_RS19590 PF00419 Fimbrial protein SEEM42N_RS19595 PF00419 Fimbrial protein SEEM42N_RS19600 PF13953 PapC C-terminal domain SEEM42N_RS19600 PF00577 Outer membrane usher protein SEEM42N_RS19600 PF13954 PapC N-terminal domain SEEM42N_RS19605 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS19605 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS19610 PF00419 Fimbrial protein SEEM42N_RS19625 PF00704 Glycosyl hydrolases family 18 SEEM42N_RS19645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS19645 PF03466 LysR substrate binding domain SEEM42N_RS19650 PF01556 DnaJ C terminal domain SEEM42N_RS19650 PF00226 DnaJ domain SEEM42N_RS19650 PF00684 DnaJ central domain SEEM42N_RS19655 PF00012 Hsp70 protein SEEM42N_RS19660 PF10807 Protein of unknown function (DUF2541) SEEM42N_RS19665 PF13099 Domain of unknown function (DUF3944) SEEM42N_RS19665 PF03981 Ubiquinol-cytochrome C chaperone SEEM42N_RS19670 PF01184 GPR1/FUN34/yaaH family SEEM42N_RS19675 PF00994 Probable molybdopterin binding domain SEEM42N_RS19680 PF00923 Transaldolase/Fructose-6-phosphate aldolase SEEM42N_RS19685 PF01235 Sodium:alanine symporter family SEEM42N_RS19690 PF03883 Peroxide stress protein YaaA SEEM42N_RS19695 PF00291 Pyridoxal-phosphate dependent enzyme SEEM42N_RS19695 PF14821 Threonine synthase N terminus SEEM42N_RS19700 PF08544 GHMP kinases C terminal SEEM42N_RS19700 PF00288 GHMP kinases N terminal domain SEEM42N_RS19705 PF00742 Homoserine dehydrogenase SEEM42N_RS19705 PF01842 ACT domain SEEM42N_RS19705 PF03447 Homoserine dehydrogenase, NAD binding domain SEEM42N_RS19705 PF00696 Amino acid kinase family SEEM42N_RS19705 PF13840 ACT domain SEEM42N_RS19710 PF08254 Threonine leader peptide SEEM42N_RS19715 PF00588 SpoU rRNA Methylase family SEEM42N_RS19725 PF00072 Response regulator receiver domain SEEM42N_RS19725 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS19735 PF15977 Winged helix-turn-helix DNA binding SEEM42N_RS19745 PF02753 Pili assembly chaperone PapD, C-terminal domain SEEM42N_RS19745 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS19750 PF13954 PapC N-terminal domain SEEM42N_RS19750 PF13953 PapC C-terminal domain SEEM42N_RS19750 PF00577 Outer membrane usher protein SEEM42N_RS19765 PF06123 Inner membrane protein CreD SEEM42N_RS19770 PF00672 HAMP domain SEEM42N_RS19770 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS19770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS19775 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS19775 PF00072 Response regulator receiver domain SEEM42N_RS19780 PF05981 CreA protein SEEM42N_RS19785 PF06445 GyrI-like small molecule binding domain SEEM42N_RS19785 PF12833 Helix-turn-helix domain SEEM42N_RS19790 PF00300 Histidine phosphatase superfamily (branch 1) SEEM42N_RS19795 PF01931 Protein of unknown function DUF84 SEEM42N_RS19800 PF01371 Trp repressor protein SEEM42N_RS19805 PF14718 Soluble lytic murein transglycosylase L domain SEEM42N_RS19805 PF01464 Transglycosylase SLT domain SEEM42N_RS19810 PF00005 ABC transporter SEEM42N_RS19810 PF12848 ABC transporter SEEM42N_RS19815 PF13521 AAA domain SEEM42N_RS19815 PF01381 Helix-turn-helix SEEM42N_RS19820 PF18073 Rubredoxin metal binding domain SEEM42N_RS19825 PF18429 Domain of unknown function (DUF5609) SEEM42N_RS19830 PF10144 Bacterial virulence factor haemolysin SEEM42N_RS19835 PF03099 Biotin/lipoate A/B protein ligase family SEEM42N_RS19835 PF10437 Bacterial lipoate protein ligase C-terminus SEEM42N_RS19845 PF06551 Protein of unknown function (DUF1120) SEEM42N_RS19850 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS19855 PF13953 PapC C-terminal domain SEEM42N_RS19855 PF13954 PapC N-terminal domain SEEM42N_RS19855 PF00577 Outer membrane usher protein SEEM42N_RS19865 PF01048 Phosphorylase superfamily SEEM42N_RS19870 PF01676 Metalloenzyme superfamily SEEM42N_RS19875 PF00591 Glycosyl transferase family, a/b domain SEEM42N_RS19875 PF02885 Glycosyl transferase family, helical bundle domain SEEM42N_RS19875 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SEEM42N_RS19880 PF01791 DeoC/LacD family aldolase SEEM42N_RS19885 PF11230 Protein of unknown function (DUF3029) SEEM42N_RS19890 PF04055 Radical SAM superfamily SEEM42N_RS19895 PF01026 TatD related DNase SEEM42N_RS19900 PF01734 Patatin-like phospholipase SEEM42N_RS19905 PF07043 Protein of unknown function (DUF1328) SEEM42N_RS19910 PF04972 BON domain SEEM42N_RS19915 PF00009 Elongation factor Tu GTP binding domain SEEM42N_RS19915 PF03144 Elongation factor Tu domain 2 SEEM42N_RS19915 PF16658 Class II release factor RF3, C-terminal domain SEEM42N_RS19920 PF13419 Haloacid dehalogenase-like hydrolase SEEM42N_RS19925 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS19930 PF03603 DNA polymerase III psi subunit SEEM42N_RS19935 PF05175 Methyltransferase small domain SEEM42N_RS19935 PF08468 Methyltransferase small domain N-terminal SEEM42N_RS19955 PF07256 Protein of unknown function (DUF1435) SEEM42N_RS19960 PF05230 MASE2 domain SEEM42N_RS19960 PF00990 Diguanylate cyclase, GGDEF domain SEEM42N_RS19965 PF06276 Ferric iron reductase FhuF-like transporter SEEM42N_RS19965 PF11575 FhuF 2Fe-2S C-terminal domain SEEM42N_RS19970 PF04073 Aminoacyl-tRNA editing domain SEEM42N_RS19975 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS19980 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS19985 PF06738 Putative threonine/serine exporter SEEM42N_RS19990 PF12821 Threonine/Serine exporter, ThrE SEEM42N_RS19995 PF17948 DnaT DNA-binding domain SEEM42N_RS20000 PF01695 IstB-like ATP binding protein SEEM42N_RS20005 PF10696 Protein of unknown function (DUF2501) SEEM42N_RS20010 PF00884 Sulfatase SEEM42N_RS20015 PF01380 SIS domain SEEM42N_RS20020 PF01380 SIS domain SEEM42N_RS20025 PF03613 PTS system mannose/fructose/sorbose family IID component SEEM42N_RS20030 PF03609 PTS system sorbose-specific iic component SEEM42N_RS20035 PF03830 PTS system sorbose subfamily IIB component SEEM42N_RS20045 PF00158 Sigma-54 interaction domain SEEM42N_RS20045 PF00874 PRD domain SEEM42N_RS20050 PF02203 Tar ligand binding domain homologue SEEM42N_RS20050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SEEM42N_RS20050 PF00672 HAMP domain SEEM42N_RS20055 PF02554 Carbon starvation protein CstA SEEM42N_RS20055 PF13722 5TM C-terminal transporter carbon starvation CstA SEEM42N_RS20060 PF04328 Selenoprotein, putative SEEM42N_RS20065 PF07683 Cobalamin synthesis protein cobW C-terminal domain SEEM42N_RS20065 PF02492 CobW/HypB/UreG, nucleotide-binding domain SEEM42N_RS20075 PF08463 EcoEI R protein C-terminal SEEM42N_RS20075 PF00271 Helicase conserved C-terminal domain SEEM42N_RS20075 PF04851 Type III restriction enzyme, res subunit SEEM42N_RS20075 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) SEEM42N_RS20080 PF12161 HsdM N-terminal domain SEEM42N_RS20080 PF02384 N-6 DNA Methylase SEEM42N_RS20085 PF01420 Type I restriction modification DNA specificity domain SEEM42N_RS20090 PF08845 Toxin SymE, type I toxin-antitoxin system SEEM42N_RS20115 PF00171 Aldehyde dehydrogenase family SEEM42N_RS20125 PF04754 Putative transposase, YhgA-like SEEM42N_RS20130 PF07690 Major Facilitator Superfamily SEEM42N_RS20135 PF04286 Protein of unknown function (DUF445) SEEM42N_RS20140 PF06779 Uncharacterised MFS-type transporter YbfB SEEM42N_RS20145 PF07670 Nucleoside recognition SEEM42N_RS20150 PF07670 Nucleoside recognition SEEM42N_RS20155 PF01979 Amidohydrolase family SEEM42N_RS20160 PF03466 LysR substrate binding domain SEEM42N_RS20160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS20165 PF01177 Asp/Glu/Hydantoin racemase SEEM42N_RS20175 PF00579 tRNA synthetases class I (W and Y) SEEM42N_RS20180 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS20180 PF07729 FCD domain SEEM42N_RS20185 PF01738 Dienelactone hydrolase family SEEM42N_RS20190 PF03625 Domain of unknown function DUF302 SEEM42N_RS20190 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SEEM42N_RS20205 PF09857 Putative toxin of bacterial toxin-antitoxin pair SEEM42N_RS20210 PF13847 Methyltransferase domain SEEM42N_RS20215 PF01709 Transcriptional regulator SEEM42N_RS20230 PF01242 6-pyruvoyl tetrahydropterin synthase SEEM42N_RS20265 PF09382 RQC domain SEEM42N_RS20265 PF00570 HRDC domain SEEM42N_RS20265 PF00271 Helicase conserved C-terminal domain SEEM42N_RS20265 PF00270 DEAD/DEAH box helicase SEEM42N_RS20265 PF16124 RecQ zinc-binding SEEM42N_RS20270 PF18339 RapA N-terminal Tudor like domain 1 SEEM42N_RS20270 PF18337 RapA N-terminal Tudor like domain SEEM42N_RS20270 PF12137 RNA polymerase recycling family C-terminal SEEM42N_RS20270 PF00271 Helicase conserved C-terminal domain SEEM42N_RS20270 PF00176 SNF2 family N-terminal domain SEEM42N_RS20315 PF00107 Zinc-binding dehydrogenase SEEM42N_RS20315 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS20320 PF01202 Shikimate kinase SEEM42N_RS20325 PF00107 Zinc-binding dehydrogenase SEEM42N_RS20325 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS20330 PF00106 short chain dehydrogenase SEEM42N_RS20335 PF02447 GntP family permease SEEM42N_RS20340 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS20345 PF03739 Lipopolysaccharide export system permease LptF/LptG SEEM42N_RS20350 PF03739 Lipopolysaccharide export system permease LptF/LptG SEEM42N_RS20355 PF00883 Cytosol aminopeptidase family, catalytic domain SEEM42N_RS20355 PF02789 Cytosol aminopeptidase family, N-terminal domain SEEM42N_RS20360 PF04364 DNA polymerase III chi subunit, HolC SEEM42N_RS20365 PF08264 Anticodon-binding domain of tRNA SEEM42N_RS20365 PF00133 tRNA synthetases class I (I, L, M and V) SEEM42N_RS20365 PF10458 Valyl tRNA synthetase tRNA binding arm SEEM42N_RS20370 PF05987 Bacterial protein of unknown function (DUF898) SEEM42N_RS20375 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS20380 PF12276 Protein of unknown function (DUF3617) SEEM42N_RS20385 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) SEEM42N_RS20390 PF06877 Regulator of ribonuclease activity B SEEM42N_RS20395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SEEM42N_RS20395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SEEM42N_RS20400 PF04074 YhcH/YjgK/YiaL SEEM42N_RS20410 PF00696 Amino acid kinase family SEEM42N_RS20415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SEEM42N_RS20415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SEEM42N_RS20420 PF03606 C4-dicarboxylate anaerobic carrier SEEM42N_RS20425 PF01316 Arginine repressor, DNA binding domain SEEM42N_RS20425 PF02863 Arginine repressor, C-terminal domain SEEM42N_RS20435 PF08052 PyrBI operon leader peptide SEEM42N_RS20440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SEEM42N_RS20440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SEEM42N_RS20445 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain SEEM42N_RS20445 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain SEEM42N_RS20450 PF01042 Endoribonuclease L-PSP SEEM42N_RS20460 PF00689 Cation transporting ATPase, C-terminus SEEM42N_RS20460 PF00690 Cation transporter/ATPase, N-terminus SEEM42N_RS20465 PF17059 MgtA leader peptide SEEM42N_RS20470 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS20475 PF00367 phosphotransferase system, EIIB SEEM42N_RS20475 PF02378 Phosphotransferase system, EIIC SEEM42N_RS20480 PF11941 Domain of unknown function (DUF3459) SEEM42N_RS20480 PF00128 Alpha amylase, catalytic domain SEEM42N_RS20485 PF13597 Anaerobic ribonucleoside-triphosphate reductase SEEM42N_RS20485 PF03477 ATP cone domain SEEM42N_RS20495 PF05016 ParE toxin of type II toxin-antitoxin system, parDE SEEM42N_RS20500 PF04221 RelB antitoxin SEEM42N_RS20505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEM42N_RS20505 PF08279 HTH domain SEEM42N_RS20505 PF00874 PRD domain SEEM42N_RS20505 PF05043 Mga helix-turn-helix domain SEEM42N_RS20510 PF07071 KDGP aldolase SEEM42N_RS20515 PF03841 L-seryl-tRNA selenium transferase SEEM42N_RS20520 PF01979 Amidohydrolase family SEEM42N_RS20550 PF07361 Cytochrome b562 SEEM42N_RS20555 PF01523 Putative modulator of DNA gyrase SEEM42N_RS20560 PF04751 Protein of unknown function (DUF615) SEEM42N_RS20565 PF08245 Mur ligase middle domain SEEM42N_RS20565 PF02875 Mur ligase family, glutamate ligase domain SEEM42N_RS20565 PF01225 Mur ligase family, catalytic domain SEEM42N_RS20570 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SEEM42N_RS20575 PF00719 Inorganic pyrophosphatase SEEM42N_RS20580 PF01979 Amidohydrolase family SEEM42N_RS20585 PF07690 Major Facilitator Superfamily SEEM42N_RS20590 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like SEEM42N_RS20595 PF04357 TamB, inner membrane protein subunit of TAM complex SEEM42N_RS20600 PF17243 POTRA domain TamA domain 1 SEEM42N_RS20600 PF07244 Surface antigen variable number repeat SEEM42N_RS20600 PF01103 Surface antigen SEEM42N_RS20605 PF01625 Peptide methionine sulfoxide reductase SEEM42N_RS20610 PF00571 CBS domain SEEM42N_RS20610 PF01595 Cyclin M transmembrane N-terminal domain SEEM42N_RS20610 PF03471 Transporter associated domain SEEM42N_RS20615 PF06526 Protein of unknown function (DUF1107) SEEM42N_RS20620 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) SEEM42N_RS20625 PF00459 Inositol monophosphatase family SEEM42N_RS20630 PF02872 5'-nucleotidase, C-terminal domain SEEM42N_RS20630 PF00149 Calcineurin-like phosphoesterase SEEM42N_RS20635 PF01638 HxlR-like helix-turn-helix SEEM42N_RS20640 PF05368 NmrA-like family SEEM42N_RS20645 PF00892 EamA-like transporter family SEEM42N_RS20650 PF01814 Hemerythrin HHE cation binding domain SEEM42N_RS20650 PF04405 Domain of Unknown function (DUF542) SEEM42N_RS20655 PF00324 Amino acid permease SEEM42N_RS20660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SEEM42N_RS20660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SEEM42N_RS20665 PF04225 Opacity-associated protein A LysM-like domain SEEM42N_RS20665 PF08525 Opacity-associated protein A N-terminal motif SEEM42N_RS20675 PF01281 Ribosomal protein L9, N-terminal domain SEEM42N_RS20675 PF03948 Ribosomal protein L9, C-terminal domain SEEM42N_RS20680 PF01084 Ribosomal protein S18 SEEM42N_RS20685 PF00436 Single-strand binding protein family SEEM42N_RS20690 PF01250 Ribosomal protein S6 SEEM42N_RS20695 PF07338 Protein of unknown function (DUF1471) SEEM42N_RS20700 PF07274 Protein of unknown function (DUF1440) SEEM42N_RS20705 PF00596 Class II Aldolase and Adducin N-terminal domain SEEM42N_RS20710 PF01261 Xylose isomerase-like TIM barrel SEEM42N_RS20715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SEEM42N_RS20720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SEEM42N_RS20725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SEEM42N_RS20730 PF03611 PTS system sugar-specific permease component SEEM42N_RS20740 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS20740 PF00455 DeoR C terminal sensor domain SEEM42N_RS20745 PF00326 Prolyl oligopeptidase family SEEM42N_RS20750 PF07338 Protein of unknown function (DUF1471) SEEM42N_RS20755 PF07338 Protein of unknown function (DUF1471) SEEM42N_RS20760 PF18158 Adaptive response protein AidB N-terminal domain SEEM42N_RS20760 PF02770 Acyl-CoA dehydrogenase, middle domain SEEM42N_RS20760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SEEM42N_RS20765 PF03738 Glutathionylspermidine synthase preATP-grasp SEEM42N_RS20770 PF06693 Protein of unknown function (DUF1190) SEEM42N_RS20775 PF03994 Domain of Unknown Function (DUF350) SEEM42N_RS20780 PF10679 Protein of unknown function (DUF2491) SEEM42N_RS20785 PF04012 PspA/IM30 family SEEM42N_RS20795 PF00588 SpoU rRNA Methylase family SEEM42N_RS20795 PF08032 RNA 2'-O ribose methyltransferase substrate binding SEEM42N_RS20800 PF08461 Ribonuclease R winged-helix domain SEEM42N_RS20800 PF17876 Cold shock domain SEEM42N_RS20800 PF00575 S1 RNA binding domain SEEM42N_RS20800 PF00773 RNB domain SEEM42N_RS20800 PF08206 Ribonuclease B OB domain SEEM42N_RS20805 PF02082 Transcriptional regulator SEEM42N_RS20810 PF00709 Adenylosuccinate synthetase SEEM42N_RS20815 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) SEEM42N_RS20820 PF01145 SPFH domain / Band 7 family SEEM42N_RS20825 PF12221 Bacterial membrane protein N terminal SEEM42N_RS20825 PF01145 SPFH domain / Band 7 family SEEM42N_RS20830 PF13167 GTP-binding GTPase N-terminal SEEM42N_RS20830 PF01926 50S ribosome-binding GTPase SEEM42N_RS20830 PF16360 GTP-binding GTPase Middle Region SEEM42N_RS20835 PF17209 Hfq protein SEEM42N_RS20845 PF08676 MutL C terminal dimerisation domain SEEM42N_RS20845 PF01119 DNA mismatch repair protein, C-terminal domain SEEM42N_RS20850 PF01520 N-acetylmuramoyl-L-alanine amidase SEEM42N_RS20855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SEEM42N_RS20860 PF03853 YjeF-related protein N-terminus SEEM42N_RS20860 PF01256 Carbohydrate kinase SEEM42N_RS20865 PF08331 Domain of unknown function (DUF1730) SEEM42N_RS20885 PF00497 Bacterial extracellular solute-binding proteins, family 3 SEEM42N_RS20890 PF00929 Exonuclease SEEM42N_RS20895 PF03193 RsgA GTPase SEEM42N_RS20900 PF02666 Phosphatidylserine decarboxylase SEEM42N_RS20905 PF12794 Mechanosensitive ion channel inner membrane domain 1 SEEM42N_RS20905 PF12795 Mechanosensitive ion channel porin domain SEEM42N_RS20905 PF00924 Mechanosensitive ion channel SEEM42N_RS20910 PF13520 Amino acid permease SEEM42N_RS20915 PF00152 tRNA synthetases class II (D, K and N) SEEM42N_RS20920 PF00890 FAD binding domain SEEM42N_RS20920 PF02910 Fumarate reductase flavoprotein C-term SEEM42N_RS20925 PF13085 2Fe-2S iron-sulfur cluster binding domain SEEM42N_RS20925 PF13183 4Fe-4S dicluster domain SEEM42N_RS20930 PF02300 Fumarate reductase subunit C SEEM42N_RS20935 PF02313 Fumarate reductase subunit D SEEM42N_RS20940 PF08212 Lipocalin-like domain SEEM42N_RS20945 PF00893 Small Multidrug Resistance protein SEEM42N_RS20950 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS20955 PF08085 Entericidin EcnA/B family SEEM42N_RS20960 PF08085 Entericidin EcnA/B family SEEM42N_RS20965 PF01132 Elongation factor P (EF-P) OB domain SEEM42N_RS20965 PF08207 Elongation factor P (EF-P) KOW-like domain SEEM42N_RS20965 PF09285 Elongation factor P, C-terminal SEEM42N_RS20970 PF04055 Radical SAM superfamily SEEM42N_RS20975 PF15922 YjeJ-like SEEM42N_RS20980 PF13698 Domain of unknown function (DUF4156) SEEM42N_RS20985 PF00118 TCP-1/cpn60 chaperonin family SEEM42N_RS20990 PF00166 Chaperonin 10 Kd subunit SEEM42N_RS20995 PF13520 Amino acid permease SEEM42N_RS21000 PF04186 FxsA cytoplasmic membrane protein SEEM42N_RS21005 PF10415 Fumarase C C-terminus SEEM42N_RS21005 PF00206 Lyase SEEM42N_RS21010 PF03605 Anaerobic c4-dicarboxylate membrane transporter SEEM42N_RS21015 PF03091 CutA1 divalent ion tolerance protein SEEM42N_RS21020 PF11412 Disulphide bond corrector protein DsbC SEEM42N_RS21020 PF02683 Cytochrome C biogenesis protein transmembrane region SEEM42N_RS21040 PF01569 PAP2 superfamily SEEM42N_RS21045 PF06977 SdiA-regulated SEEM42N_RS21070 PF02432 Fimbrial, major and minor subunit SEEM42N_RS21080 PF17547 Family of unknown function (DUF5462) SEEM42N_RS21085 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SEEM42N_RS21090 PF13954 PapC N-terminal domain SEEM42N_RS21090 PF00577 Outer membrane usher protein SEEM42N_RS21100 PF03333 Adhesin biosynthesis transcription regulatory protein SEEM42N_RS21125 PF12833 Helix-turn-helix domain SEEM42N_RS21130 PF00072 Response regulator receiver domain SEEM42N_RS21130 PF00196 Bacterial regulatory proteins, luxR family SEEM42N_RS21140 PF06977 SdiA-regulated SEEM42N_RS21150 PF02613 Nitrate reductase delta subunit SEEM42N_RS21155 PF04976 DMSO reductase anchor subunit (DmsC) SEEM42N_RS21160 PF13247 4Fe-4S dicluster domain SEEM42N_RS21160 PF12800 4Fe-4S binding domain SEEM42N_RS21165 PF01568 Molydopterin dinucleotide binding domain SEEM42N_RS21165 PF00384 Molybdopterin oxidoreductase SEEM42N_RS21165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SEEM42N_RS21170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS21170 PF17203 Single cache domain 3 SEEM42N_RS21170 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SEEM42N_RS21170 PF00989 PAS fold SEEM42N_RS21175 PF00072 Response regulator receiver domain SEEM42N_RS21185 PF03605 Anaerobic c4-dicarboxylate membrane transporter SEEM42N_RS21190 PF05681 Fumarate hydratase (Fumerase) SEEM42N_RS21190 PF05683 Fumarase C-terminus SEEM42N_RS21200 PF02056 Family 4 glycosyl hydrolase SEEM42N_RS21200 PF11975 Family 4 glycosyl hydrolase C-terminal domain SEEM42N_RS21205 PF12833 Helix-turn-helix domain SEEM42N_RS21210 PF01276 Orn/Lys/Arg decarboxylase, major domain SEEM42N_RS21210 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SEEM42N_RS21210 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SEEM42N_RS21215 PF12833 Helix-turn-helix domain SEEM42N_RS21220 PF13520 Amino acid permease SEEM42N_RS21225 PF00884 Sulfatase SEEM42N_RS21225 PF08019 Phosphoethanolamine transferase EptA/EptB SEEM42N_RS21230 PF00072 Response regulator receiver domain SEEM42N_RS21230 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS21235 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS21235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS21245 PF00083 Sugar (and other) transporter SEEM42N_RS21245 PF08946 Osmosensory transporter coiled coil SEEM42N_RS21250 PF08274 PhnA Zinc-Ribbon SEEM42N_RS21250 PF03831 PhnA domain SEEM42N_RS21255 PF06983 3-demethylubiquinone-9 3-methyltransferase SEEM42N_RS21260 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS21275 PF08238 Sel1 repeat SEEM42N_RS21280 PF00375 Sodium:dicarboxylate symporter family SEEM42N_RS21290 PF03918 Cytochrome C biogenesis protein SEEM42N_RS21295 PF01578 Cytochrome C assembly protein SEEM42N_RS21295 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SEEM42N_RS21300 PF03916 Polysulphide reductase, NrfD SEEM42N_RS21305 PF00037 4Fe-4S binding domain SEEM42N_RS21305 PF13247 4Fe-4S dicluster domain SEEM42N_RS21310 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SEEM42N_RS21310 PF13435 Cytochrome c554 and c-prime SEEM42N_RS21315 PF02335 Cytochrome c552 SEEM42N_RS21320 PF00501 AMP-binding enzyme SEEM42N_RS21320 PF13193 AMP-binding enzyme C-terminal domain SEEM42N_RS21320 PF16177 Acetyl-coenzyme A synthetase N-terminus SEEM42N_RS21325 PF04341 Protein of unknown function, DUF485 SEEM42N_RS21330 PF00474 Sodium:solute symporter family SEEM42N_RS21335 PF04172 LrgB-like family SEEM42N_RS21340 PF03788 LrgA family SEEM42N_RS21345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS21345 PF03466 LysR substrate binding domain SEEM42N_RS21350 PF00999 Sodium/hydrogen exchanger family SEEM42N_RS21355 PF00860 Permease family SEEM42N_RS21365 PF09278 MerR, DNA binding SEEM42N_RS21365 PF00376 MerR family regulatory protein SEEM42N_RS21370 PF12833 Helix-turn-helix domain SEEM42N_RS21375 PF00563 EAL domain SEEM42N_RS21375 PF12792 CSS motif domain associated with EAL SEEM42N_RS21380 PF15940 Family of unknown function SEEM42N_RS21385 PF00664 ABC transporter transmembrane region SEEM42N_RS21385 PF00005 ABC transporter SEEM42N_RS21415 PF00436 Single-strand binding protein family SEEM42N_RS21420 PF00005 ABC transporter SEEM42N_RS21420 PF17755 UvrA DNA-binding domain SEEM42N_RS21420 PF17760 UvrA interaction domain SEEM42N_RS21435 PF04237 YjbR SEEM42N_RS21440 PF01894 Uncharacterised protein family UPF0047 SEEM42N_RS21445 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SEEM42N_RS21450 PF00155 Aminotransferase class I and II SEEM42N_RS21455 PF00842 Alanine racemase, C-terminal domain SEEM42N_RS21455 PF01168 Alanine racemase, N-terminal domain SEEM42N_RS21460 PF03796 DnaB-like helicase C terminal domain SEEM42N_RS21460 PF00772 DnaB-like helicase N terminal domain SEEM42N_RS21465 PF00107 Zinc-binding dehydrogenase SEEM42N_RS21465 PF08240 Alcohol dehydrogenase GroES-like domain SEEM42N_RS21470 PF09583 Phage shock protein G (Phageshock_PspG) SEEM42N_RS21475 PF01207 Dihydrouridine synthase (Dus) SEEM42N_RS21485 PF01475 Ferric uptake regulator family SEEM42N_RS21490 PF05532 CsbD-like SEEM42N_RS21500 PF01554 MatE SEEM42N_RS21505 PF01726 LexA DNA binding domain SEEM42N_RS21505 PF00717 Peptidase S24-like SEEM42N_RS21510 PF01219 Prokaryotic diacylglycerol kinase SEEM42N_RS21515 PF01553 Acyltransferase SEEM42N_RS21520 PF01040 UbiA prenyltransferase family SEEM42N_RS21525 PF04345 Chorismate lyase SEEM42N_RS21530 PF07148 Maltose operon periplasmic protein precursor (MalM) SEEM42N_RS21535 PF02264 LamB porin SEEM42N_RS21540 PF00005 ABC transporter SEEM42N_RS21540 PF17912 MalK OB fold domain SEEM42N_RS21545 PF01547 Bacterial extracellular solute-binding protein SEEM42N_RS21550 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS21550 PF14785 Maltose transport system permease protein MalF P2 domain SEEM42N_RS21555 PF00528 Binding-protein-dependent transport system inner membrane component SEEM42N_RS21560 PF00083 Sugar (and other) transporter SEEM42N_RS21565 PF06146 Phosphate-starvation-inducible E SEEM42N_RS21570 PF06082 Exopolysaccharide biosynthesis protein YbjH SEEM42N_RS21575 PF06251 Capsule biosynthesis GfcC SEEM42N_RS21580 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF SEEM42N_RS21585 PF11106 Exopolysaccharide production protein YjbE SEEM42N_RS21590 PF00342 Phosphoglucose isomerase SEEM42N_RS21595 PF00696 Amino acid kinase family SEEM42N_RS21595 PF01842 ACT domain SEEM42N_RS21615 PF00455 DeoR C terminal sensor domain SEEM42N_RS21615 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS21620 PF11656 YjbD family (DUF3811) SEEM42N_RS21625 PF00849 RNA pseudouridylate synthase SEEM42N_RS21625 PF01479 S4 domain SEEM42N_RS21630 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) SEEM42N_RS21640 PF03575 Peptidase family S51 SEEM42N_RS21645 PF02690 Na+/Pi-cotransporter SEEM42N_RS21650 PF02607 B12 binding domain SEEM42N_RS21650 PF02574 Homocysteine S-methyltransferase SEEM42N_RS21650 PF00809 Pterin binding enzyme SEEM42N_RS21650 PF02310 B12 binding domain SEEM42N_RS21650 PF02965 Vitamin B12 dependent methionine synthase, activation domain SEEM42N_RS21655 PF01614 Bacterial transcriptional regulator SEEM42N_RS21655 PF09339 IclR helix-turn-helix domain SEEM42N_RS21665 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) SEEM42N_RS21670 PF00463 Isocitrate lyase family SEEM42N_RS21675 PF01274 Malate synthase SEEM42N_RS21680 PF04204 Homoserine O-succinyltransferase SEEM42N_RS21685 PF13673 Acetyltransferase (GNAT) domain SEEM42N_RS21710 PF01808 AICARFT/IMPCHase bienzyme SEEM42N_RS21710 PF02142 MGS-like domain SEEM42N_RS21715 PF02843 Phosphoribosylglycinamide synthetase, C domain SEEM42N_RS21715 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SEEM42N_RS21715 PF02844 Phosphoribosylglycinamide synthetase, N domain SEEM42N_RS21720 PF02954 Bacterial regulatory protein, Fis family SEEM42N_RS21720 PF00072 Response regulator receiver domain SEEM42N_RS21720 PF00158 Sigma-54 interaction domain SEEM42N_RS21725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS21725 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS21730 PF13801 Heavy-metal resistance SEEM42N_RS21735 PF07356 Protein of unknown function (DUF1481) SEEM42N_RS21740 PF00216 Bacterial DNA-binding protein SEEM42N_RS21745 PF04222 Protein of unknown function (DUF416) SEEM42N_RS21750 PF04493 Endonuclease V SEEM42N_RS21755 PF01208 Uroporphyrinogen decarboxylase (URO-D) SEEM42N_RS21760 PF09297 NADH pyrophosphatase zinc ribbon domain SEEM42N_RS21760 PF00293 NUDIX domain SEEM42N_RS21765 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ SEEM42N_RS21770 PF13667 ThiC-associated domain SEEM42N_RS21770 PF01964 Radical SAM ThiC family SEEM42N_RS21775 PF02581 Thiamine monophosphate synthase SEEM42N_RS21780 PF00899 ThiF family SEEM42N_RS21785 PF02597 ThiS family SEEM42N_RS21790 PF05690 Thiazole biosynthesis protein ThiG SEEM42N_RS21795 PF04055 Radical SAM superfamily SEEM42N_RS21795 PF06968 Biotin and Thiamin Synthesis associated domain SEEM42N_RS21820 PF05000 RNA polymerase Rpb1, domain 4 SEEM42N_RS21820 PF00623 RNA polymerase Rpb1, domain 2 SEEM42N_RS21820 PF04998 RNA polymerase Rpb1, domain 5 SEEM42N_RS21820 PF04997 RNA polymerase Rpb1, domain 1 SEEM42N_RS21820 PF04983 RNA polymerase Rpb1, domain 3 SEEM42N_RS21825 PF00562 RNA polymerase Rpb2, domain 6 SEEM42N_RS21825 PF04561 RNA polymerase Rpb2, domain 2 SEEM42N_RS21825 PF04565 RNA polymerase Rpb2, domain 3 SEEM42N_RS21825 PF04563 RNA polymerase beta subunit SEEM42N_RS21825 PF04560 RNA polymerase Rpb2, domain 7 SEEM42N_RS21825 PF10385 RNA polymerase beta subunit external 1 domain SEEM42N_RS21830 PF00542 Ribosomal protein L7/L12 C-terminal domain SEEM42N_RS21830 PF16320 Ribosomal protein L7/L12 dimerisation domain SEEM42N_RS21835 PF00466 Ribosomal protein L10 SEEM42N_RS21840 PF00687 Ribosomal protein L1p/L10e family SEEM42N_RS21845 PF00298 Ribosomal protein L11, RNA binding domain SEEM42N_RS21845 PF03946 Ribosomal protein L11, N-terminal domain SEEM42N_RS21850 PF00467 KOW motif SEEM42N_RS21850 PF02357 Transcription termination factor nusG SEEM42N_RS21855 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SEEM42N_RS21860 PF00009 Elongation factor Tu GTP binding domain SEEM42N_RS21860 PF03143 Elongation factor Tu C-terminal domain SEEM42N_RS21860 PF03144 Elongation factor Tu domain 2 SEEM42N_RS21890 PF00485 Phosphoribulokinase / Uridine kinase family SEEM42N_RS21895 PF03099 Biotin/lipoate A/B protein ligase family SEEM42N_RS21895 PF08279 HTH domain SEEM42N_RS21895 PF02237 Biotin protein ligase C terminal domain SEEM42N_RS21900 PF01565 FAD binding domain SEEM42N_RS21900 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SEEM42N_RS21930 PF01177 Asp/Glu/Hydantoin racemase SEEM42N_RS21935 PF00593 TonB dependent receptor SEEM42N_RS21935 PF07715 TonB-dependent Receptor Plug Domain SEEM42N_RS21940 PF05958 tRNA (Uracil-5-)-methyltransferase SEEM42N_RS21945 PF07226 Protein of unknown function (DUF1422) SEEM42N_RS21950 PF00440 Bacterial regulatory proteins, tetR family SEEM42N_RS21955 PF07992 Pyridine nucleotide-disulphide oxidoreductase SEEM42N_RS21955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SEEM42N_RS21960 PF03466 LysR substrate binding domain SEEM42N_RS21960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS21965 PF14698 Argininosuccinate lyase C-terminal SEEM42N_RS21965 PF00206 Lyase SEEM42N_RS21970 PF00696 Amino acid kinase family SEEM42N_RS21975 PF02774 Semialdehyde dehydrogenase, dimerisation domain SEEM42N_RS21975 PF01118 Semialdehyde dehydrogenase, NAD binding domain SEEM42N_RS21980 PF07687 Peptidase dimerisation domain SEEM42N_RS21980 PF01546 Peptidase family M20/M25/M40 SEEM42N_RS21985 PF00311 Phosphoenolpyruvate carboxylase SEEM42N_RS21990 PF00884 Sulfatase SEEM42N_RS21995 PF12833 Helix-turn-helix domain SEEM42N_RS22000 PF00923 Transaldolase/Fructose-6-phosphate aldolase SEEM42N_RS22005 PF00465 Iron-containing alcohol dehydrogenase SEEM42N_RS22010 PF00141 Peroxidase SEEM42N_RS22015 PF02219 Methylenetetrahydrofolate reductase SEEM42N_RS22020 PF02872 5'-nucleotidase, C-terminal domain SEEM42N_RS22020 PF00149 Calcineurin-like phosphoesterase SEEM42N_RS22020 PF17936 Bacterial Ig domain SEEM42N_RS22035 PF00696 Amino acid kinase family SEEM42N_RS22035 PF03447 Homoserine dehydrogenase, NAD binding domain SEEM42N_RS22035 PF00742 Homoserine dehydrogenase SEEM42N_RS22040 PF01053 Cys/Met metabolism PLP-dependent enzyme SEEM42N_RS22045 PF01340 Met Apo-repressor, MetJ SEEM42N_RS22050 PF17425 Arylsulfotransferase Ig-like domain SEEM42N_RS22050 PF05935 Arylsulfotransferase (ASST) SEEM42N_RS22060 PF01197 Ribosomal protein L31 SEEM42N_RS22065 PF00270 DEAD/DEAH box helicase SEEM42N_RS22065 PF17764 3′ DNA-binding domain (3′BD) SEEM42N_RS22065 PF18074 Primosomal protein N C-terminal domain SEEM42N_RS22065 PF00271 Helicase conserved C-terminal domain SEEM42N_RS22065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SEEM42N_RS22070 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS22075 PF05036 Sporulation related domain SEEM42N_RS22080 PF00227 Proteasome subunit SEEM42N_RS22085 PF07724 AAA domain (Cdc48 subfamily) SEEM42N_RS22085 PF10431 C-terminal, D2-small domain, of ClpB protein SEEM42N_RS22085 PF00004 ATPase family associated with various cellular activities (AAA) SEEM42N_RS22090 PF01040 UbiA prenyltransferase family SEEM42N_RS22095 PF03737 Aldolase/RraA SEEM42N_RS22100 PF06005 Cell division protein ZapB SEEM42N_RS22105 PF00230 Major intrinsic protein SEEM42N_RS22110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEM42N_RS22110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEM42N_RS22115 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SEEM42N_RS22120 PF00175 Oxidoreductase NAD-binding domain SEEM42N_RS22120 PF00970 Oxidoreductase FAD-binding domain SEEM42N_RS22125 PF05656 Protein of unknown function (DUF805) SEEM42N_RS22130 PF07305 Protein of unknown function (DUF1454) SEEM42N_RS22135 PF00121 Triosephosphate isomerase SEEM42N_RS22140 PF00834 Ribulose-phosphate 3 epimerase family SEEM42N_RS22145 PF03992 Antibiotic biosynthesis monooxygenase SEEM42N_RS22150 PF01791 DeoC/LacD family aldolase SEEM42N_RS22155 PF13407 Periplasmic binding protein domain SEEM42N_RS22160 PF02653 Branched-chain amino acid transport system / permease component SEEM42N_RS22165 PF02653 Branched-chain amino acid transport system / permease component SEEM42N_RS22170 PF00005 ABC transporter SEEM42N_RS22175 PF04198 Putative sugar-binding domain SEEM42N_RS22180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEM42N_RS22180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEM42N_RS22200 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS22200 PF00155 Aminotransferase class I and II SEEM42N_RS22210 PF00294 pfkB family carbohydrate kinase SEEM42N_RS22220 PF02611 CDP-diacylglycerol pyrophosphatase SEEM42N_RS22230 PF00365 Phosphofructokinase SEEM42N_RS22235 PF01545 Cation efflux family SEEM42N_RS22235 PF16916 Dimerisation domain of Zinc Transporter SEEM42N_RS22240 PF07813 LTXXQ motif family protein SEEM42N_RS22245 PF00486 Transcriptional regulatory protein, C terminal SEEM42N_RS22245 PF00072 Response regulator receiver domain SEEM42N_RS22250 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS22250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS22250 PF00672 HAMP domain SEEM42N_RS22250 PF16527 Two-component sensor protein CpxA, periplasmic domain SEEM42N_RS22260 PF03475 3-alpha domain SEEM42N_RS22260 PF03473 MOSC domain SEEM42N_RS22265 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SEEM42N_RS22265 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SEEM42N_RS22270 PF03480 Bacterial extracellular solute-binding protein, family 7 SEEM42N_RS22275 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SEEM42N_RS22280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SEEM42N_RS22285 PF06178 Oligogalacturonate-specific porin protein (KdgM) SEEM42N_RS22290 PF06379 L-rhamnose-proton symport protein (RhaT) SEEM42N_RS22295 PF12833 Helix-turn-helix domain SEEM42N_RS22295 PF02311 AraC-like ligand binding domain SEEM42N_RS22300 PF02311 AraC-like ligand binding domain SEEM42N_RS22300 PF12833 Helix-turn-helix domain SEEM42N_RS22305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SEEM42N_RS22305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SEEM42N_RS22310 PF06134 L-rhamnose isomerase (RhaA) SEEM42N_RS22315 PF00596 Class II Aldolase and Adducin N-terminal domain SEEM42N_RS22320 PF00465 Iron-containing alcohol dehydrogenase SEEM42N_RS22325 PF05336 L-rhamnose mutarotase SEEM42N_RS22335 PF03591 AzlC protein SEEM42N_RS22345 PF12889 Protein of unknown function (DUF3829) SEEM42N_RS22350 PF02634 FdhD/NarQ family SEEM42N_RS22360 PF09163 Formate dehydrogenase N, transmembrane SEEM42N_RS22360 PF13247 4Fe-4S dicluster domain SEEM42N_RS22365 PF01292 Prokaryotic cytochrome b561 SEEM42N_RS22370 PF04216 Protein involved in formate dehydrogenase formation SEEM42N_RS22380 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system SEEM42N_RS22385 PF07859 alpha/beta hydrolase fold SEEM42N_RS22390 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system SEEM42N_RS22395 PF01381 Helix-turn-helix SEEM42N_RS22400 PF09500 Putative thioesterase (yiiD_Cterm) SEEM42N_RS22400 PF00583 Acetyltransferase (GNAT) family SEEM42N_RS22405 PF02580 D-Tyr-tRNA(Tyr) deacylase SEEM42N_RS22410 PF03631 Virulence factor BrkB SEEM42N_RS22415 PF13419 Haloacid dehalogenase-like hydrolase SEEM42N_RS22420 PF08220 DeoR-like helix-turn-helix domain SEEM42N_RS22420 PF00455 DeoR C terminal sensor domain SEEM42N_RS22425 PF00294 pfkB family carbohydrate kinase SEEM42N_RS22430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SEEM42N_RS22430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SEEM42N_RS22435 PF01791 DeoC/LacD family aldolase SEEM42N_RS22445 PF01263 Aldose 1-epimerase SEEM42N_RS22455 PF01055 Glycosyl hydrolases family 31 SEEM42N_RS22470 PF06178 Oligogalacturonate-specific porin protein (KdgM) SEEM42N_RS22485 PF03951 Glutamine synthetase, beta-Grasp domain SEEM42N_RS22485 PF00120 Glutamine synthetase, catalytic domain SEEM42N_RS22490 PF00989 PAS fold SEEM42N_RS22490 PF00512 His Kinase A (phospho-acceptor) domain SEEM42N_RS22490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SEEM42N_RS22495 PF00158 Sigma-54 interaction domain SEEM42N_RS22495 PF00072 Response regulator receiver domain SEEM42N_RS22495 PF02954 Bacterial regulatory protein, Fis family SEEM42N_RS22505 PF04055 Radical SAM superfamily SEEM42N_RS22505 PF06969 HemN C-terminal domain SEEM42N_RS22510 PF04220 Der GTPase activator (YihI) SEEM42N_RS22520 PF01926 50S ribosome-binding GTPase SEEM42N_RS22525 PF00476 DNA polymerase family A SEEM42N_RS22525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SEEM42N_RS22525 PF01612 3'-5' exonuclease SEEM42N_RS22525 PF01367 5'-3' exonuclease, C-terminal SAM fold SEEM42N_RS22530 PF01553 Acyltransferase SEEM42N_RS22535 PF01323 DSBA-like thioredoxin domain SEEM42N_RS22540 PF01636 Phosphotransferase enzyme family SEEM42N_RS22545 PF06288 Protein of unknown function (DUF1040) SEEM42N_RS22550 PF12804 MobA-like NTP transferase domain SEEM42N_RS22555 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SEEM42N_RS22585 PF12724 Flavodoxin domain SEEM42N_RS22590 PF02386 Cation transport protein SEEM42N_RS22595 PF09186 Domain of unknown function (DUF1949) SEEM42N_RS22595 PF01205 Uncharacterized protein family UPF0029 SEEM42N_RS22600 PF00557 Metallopeptidase family M24 SEEM42N_RS22605 PF00378 Enoyl-CoA hydratase/isomerase SEEM42N_RS22605 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SEEM42N_RS22605 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SEEM42N_RS22610 PF00108 Thiolase, N-terminal domain SEEM42N_RS22610 PF02803 Thiolase, C-terminal domain SEEM42N_RS22615 PF05935 Arylsulfotransferase (ASST) SEEM42N_RS22615 PF17425 Arylsulfotransferase Ig-like domain SEEM42N_RS22620 PF00970 Oxidoreductase FAD-binding domain SEEM42N_RS22620 PF00175 Oxidoreductase NAD-binding domain SEEM42N_RS22625 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SEEM42N_RS22630 PF02357 Transcription termination factor nusG SEEM42N_RS22635 PF01026 TatD related DNase SEEM42N_RS22640 PF00902 Sec-independent protein translocase protein (TatC) SEEM42N_RS22650 PF02416 mttA/Hcf106 family SEEM42N_RS22655 PF03109 ABC1 family SEEM42N_RS22660 PF02036 SCP-2 sterol transfer family SEEM42N_RS22665 PF01209 ubiE/COQ5 methyltransferase family SEEM42N_RS22670 PF02646 RmuC family SEEM42N_RS22675 PF01048 Phosphorylase superfamily SEEM42N_RS22680 PF01738 Dienelactone hydrolase family SEEM42N_RS22685 PF04055 Radical SAM superfamily SEEM42N_RS22685 PF13186 Iron-sulfur cluster-binding domain SEEM42N_RS22690 PF08267 Cobalamin-independent synthase, N-terminal domain SEEM42N_RS22690 PF01717 Cobalamin-independent synthase, Catalytic domain SEEM42N_RS22695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS22695 PF03466 LysR substrate binding domain SEEM42N_RS22700 PF00892 EamA-like transporter family SEEM42N_RS22710 PF12146 Serine aminopeptidase, S33 SEEM42N_RS22715 PF01810 LysE type translocator SEEM42N_RS22720 PF01810 LysE type translocator SEEM42N_RS22725 PF00270 DEAD/DEAH box helicase SEEM42N_RS22725 PF00271 Helicase conserved C-terminal domain SEEM42N_RS22725 PF09382 RQC domain SEEM42N_RS22725 PF16124 RecQ zinc-binding SEEM42N_RS22725 PF00570 HRDC domain SEEM42N_RS22730 PF02253 Phospholipase A1 SEEM42N_RS22735 PF03061 Thioesterase superfamily SEEM42N_RS22740 PF00892 EamA-like transporter family SEEM42N_RS22745 PF01544 CorA-like Mg2+ transporter protein SEEM42N_RS22750 PF13361 UvrD-like helicase C-terminal domain SEEM42N_RS22750 PF00580 UvrD/REP helicase N-terminal domain SEEM42N_RS22755 PF13419 Haloacid dehalogenase-like hydrolase SEEM42N_RS22760 PF02899 Phage integrase, N-terminal SAM-like domain SEEM42N_RS22760 PF00589 Phage integrase family SEEM42N_RS22765 PF04340 Protein of unknown function, DUF484 SEEM42N_RS22770 PF01678 Diaminopimelate epimerase SEEM42N_RS22775 PF13627 Prokaryotic lipoprotein-attachment site SEEM42N_RS22795 PF01491 Frataxin-like domain SEEM42N_RS22815 PF01295 Adenylate cyclase, class-I SEEM42N_RS22815 PF12633 Adenylate cyclase NT domain SEEM42N_RS22820 PF03900 Porphobilinogen deaminase, C-terminal domain SEEM42N_RS22820 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SEEM42N_RS22825 PF02602 Uroporphyrinogen-III synthase HemD SEEM42N_RS22830 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase SEEM42N_RS22835 PF07219 HemY protein N-terminus SEEM42N_RS22835 PF07719 Tetratricopeptide repeat SEEM42N_RS22860 PF00324 Amino acid permease SEEM42N_RS22865 PF03808 Glycosyl transferase WecB/TagA/CpsF family SEEM42N_RS22870 PF06899 WzyE protein, O-antigen assembly polymerase SEEM42N_RS22875 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 SEEM42N_RS22880 PF01943 Polysaccharide biosynthesis protein SEEM42N_RS22885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SEEM42N_RS22895 PF00483 Nucleotidyl transferase SEEM42N_RS22900 PF16363 GDP-mannose 4,6 dehydratase SEEM42N_RS22905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SEEM42N_RS22905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SEEM42N_RS22905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SEEM42N_RS22910 PF02350 UDP-N-acetylglucosamine 2-epimerase SEEM42N_RS22915 PF02706 Chain length determinant protein SEEM42N_RS22920 PF00953 Glycosyl transferase family 4 SEEM42N_RS22925 PF07498 Rho termination factor, N-terminal domain SEEM42N_RS22925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SEEM42N_RS22925 PF07497 Rho termination factor, RNA-binding domain SEEM42N_RS22935 PF00085 Thioredoxin SEEM42N_RS22940 PF00271 Helicase conserved C-terminal domain SEEM42N_RS22940 PF00270 DEAD/DEAH box helicase SEEM42N_RS22945 PF02541 Ppx/GppA phosphatase family SEEM42N_RS22950 PF00580 UvrD/REP helicase N-terminal domain SEEM42N_RS22950 PF13361 UvrD-like helicase C-terminal domain SEEM42N_RS22955 PF04973 Nicotinamide mononucleotide transporter SEEM42N_RS22960 PF01048 Phosphorylase superfamily SEEM42N_RS22975 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SEEM42N_RS22975 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SEEM42N_RS22980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS22980 PF03466 LysR substrate binding domain SEEM42N_RS23000 PF00585 C-terminal regulatory domain of Threonine dehydratase SEEM42N_RS23000 PF00291 Pyridoxal-phosphate dependent enzyme SEEM42N_RS23005 PF00920 Dehydratase family SEEM42N_RS23010 PF01063 Amino-transferase class IV SEEM42N_RS23020 PF00205 Thiamine pyrophosphate enzyme, central domain SEEM42N_RS23020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SEEM42N_RS23020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SEEM42N_RS23025 PF08046 IlvGEDA operon leader peptide SEEM42N_RS23030 PF01078 Magnesium chelatase, subunit ChlI SEEM42N_RS23030 PF13335 Magnesium chelatase, subunit ChlI C-terminal SEEM42N_RS23035 PF04219 Protein of unknown function, DUF SEEM42N_RS23040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SEEM42N_RS23040 PF03466 LysR substrate binding domain SEEM42N_RS23075 PF00392 Bacterial regulatory proteins, gntR family SEEM42N_RS23075 PF07729 FCD domain SEEM42N_RS23080 PF07690 Major Facilitator Superfamily SEEM42N_RS23085 PF00356 Bacterial regulatory proteins, lacI family SEEM42N_RS23090 PF00294 pfkB family carbohydrate kinase SEEM42N_RS23095 PF13407 Periplasmic binding protein domain SEEM42N_RS23100 PF02653 Branched-chain amino acid transport system / permease component SEEM42N_RS23105 PF00005 ABC transporter SEEM42N_RS23110 PF05025 RbsD / FucU transport protein family SEEM42N_RS23115 PF02705 K+ potassium transporter SEEM42N_RS23120 PF07728 AAA domain (dynein-related subfamily) SEEM42N_RS23120 PF17868 AAA lid domain SEEM42N_RS23120 PF12592 Protein of unknown function (DUF3763) SEEM42N_RS23125 PF05762 VWA domain containing CoxE-like protein SEEM42N_RS23130 PF03590 Aspartate-ammonia ligase SEEM42N_RS23135 PF01037 Lrp/AsnC ligand binding domain