ABT66_RS00160	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
ABT66_RS00160	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
ABT66_RS00160	SM00493	ABT66_RS00160
ABT66_RS00235	SM00470	ParB-like nuclease domain
ABT66_RS00320	SM00857	Resolvase, N terminal domain
ABT66_RS00625	SM00470	ParB-like nuclease domain
ABT66_RS00740	SM00327	von Willebrand factor (vWF) type A domain
ABT66_RS00860	SM00327	von Willebrand factor (vWF) type A domain
ABT66_RS00865	SM00327	von Willebrand factor (vWF) type A domain
ABT66_RS00875	SM00327	von Willebrand factor (vWF) type A domain
ABT66_RS00950	SM00327	von Willebrand factor (vWF) type A domain
ABT66_RS01015	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS01045	SM00422	helix_turn_helix, mercury resistance
ABT66_RS01055	SM00014	Acid phosphatase homologues
ABT66_RS01075	SM00422	helix_turn_helix, mercury resistance
ABT66_RS01100	SM00422	helix_turn_helix, mercury resistance
ABT66_RS01130	SM00528	Domain in histone-like proteins of HNS family
ABT66_RS01165	SM00857	Resolvase, N terminal domain
ABT66_RS01200	SM01059	Chloramphenicol acetyltransferase
ABT66_RS01225	SM00829	Enoylreductase
ABT66_RS01400	SM01006	Siderophore biosynthesis protein domain
ABT66_RS01855	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABT66_RS01885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS01885	SM00895	ABT66_RS01885
ABT66_RS01985	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABT66_RS01990	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS02045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS02045	SM00895	ABT66_RS02045
ABT66_RS02070	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABT66_RS02100	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS02105	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS02140	SM00116	Domain in cystathionine beta-synthase and other proteins.
ABT66_RS02140	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS02215	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
ABT66_RS02215	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
ABT66_RS02235	SM00448	cheY-homologous receiver domain
ABT66_RS02235	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS02255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS02255	SM00387	Histidine kinase-like ATPases
ABT66_RS02255	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS02340	SM00900	ABT66_RS02340
ABT66_RS02350	SM00478	endonuclease III
ABT66_RS02350	SM00525	ABT66_RS02350
ABT66_RS02370	SM00363	S4 RNA-binding domain
ABT66_RS02395	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABT66_RS02445	SM00479	ABT66_RS02445
ABT66_RS02480	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS02555	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS02615	SM00028	Tetratricopeptide repeats
ABT66_RS02670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS02670	SM00387	Histidine kinase-like ATPases
ABT66_RS02670	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS02670	SM00448	cheY-homologous receiver domain
ABT66_RS02675	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS02675	SM00448	cheY-homologous receiver domain
ABT66_RS02680	SM00422	helix_turn_helix, mercury resistance
ABT66_RS02695	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS02695	SM00448	cheY-homologous receiver domain
ABT66_RS02700	SM00387	Histidine kinase-like ATPases
ABT66_RS02700	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS02715	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS02720	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS02760	SM00257	Lysin motif
ABT66_RS02780	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS02850	SM00882	Coenzyme A transferase
ABT66_RS02860	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS02865	SM00893	Electron transfer flavoprotein domain
ABT66_RS02870	SM00893	Electron transfer flavoprotein domain
ABT66_RS02925	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS02940	SM00411	bacterial (prokaryotic) histone like domain
ABT66_RS02945	SM00873	B3/4 domain
ABT66_RS02945	SM00874	tRNA synthetase B5 domain
ABT66_RS02945	SM00896	Ferredoxin-fold anticodon binding domain
ABT66_RS02975	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ABT66_RS02985	SM00477	DNA/RNA non-specific endonuclease
ABT66_RS02985	SM00892	DNA/RNA non-specific endonuclease
ABT66_RS03050	SM01060	ABT66_RS03050
ABT66_RS03065	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS03100	SM00465	GIY-YIG type nucleases (URI domain)
ABT66_RS03160	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ABT66_RS03165	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
ABT66_RS03165	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
ABT66_RS03165	SM00493	ABT66_RS03165
ABT66_RS03195	SM00870	ABT66_RS03195
ABT66_RS03215	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
ABT66_RS03245	SM00763	PrkA AAA domain
ABT66_RS03260	SM00267	diguanylate cyclase
ABT66_RS03285	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS03350	SM00830	Chorismate mutase type II
ABT66_RS03370	SM00422	helix_turn_helix, mercury resistance
ABT66_RS03375	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS03405	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS03410	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS03490	SM00357	Cold shock protein domain
ABT66_RS03495	SM00458	Ricin-type beta-trefoil
ABT66_RS03525	SM01329	ABT66_RS03525
ABT66_RS03560	SM00448	cheY-homologous receiver domain
ABT66_RS03560	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS03565	SM00387	Histidine kinase-like ATPases
ABT66_RS03570	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
ABT66_RS03590	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS03630	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS03640	SM00487	DEAD-like helicases superfamily
ABT66_RS03640	SM00490	helicase superfamily c-terminal domain
ABT66_RS03640	SM00982	ABT66_RS03640
ABT66_RS03640	SM01058	CarD-like/TRCF domain
ABT66_RS03645	SM00257	Lysin motif
ABT66_RS03735	SM00825	Beta-ketoacyl synthase
ABT66_RS03745	SM00822	ABT66_RS03745
ABT66_RS03750	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
ABT66_RS03790	SM00363	S4 RNA-binding domain
ABT66_RS03800	SM00316	Ribosomal protein S1-like RNA-binding domain
ABT66_RS03820	SM00047	Lysozyme subfamily 2
ABT66_RS03870	SM00858	ABT66_RS03870
ABT66_RS03955	SM00867	YceI-like domain 
ABT66_RS03960	SM00450	Rhodanese Homology Domain
ABT66_RS04005	SM00155	Phospholipase D. Active site motifs.
ABT66_RS04010	SM00506	Appr-1"-p processing enzyme
ABT66_RS04040	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS04070	SM00481	DNA polymerase alpha chain like domain
ABT66_RS04210	SM00271	DnaJ molecular chaperone homology domain
ABT66_RS04230	SM00849	Metallo-beta-lactamase superfamily
ABT66_RS04235	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS04275	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABT66_RS04285	SM00903	Flavin reductase like domain
ABT66_RS04295	SM00095	Transthyretin
ABT66_RS04300	SM00448	cheY-homologous receiver domain
ABT66_RS04300	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS04305	SM00387	Histidine kinase-like ATPases
ABT66_RS04305	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS04610	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS04680	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS04690	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
ABT66_RS04695	SM00992	Hemimethylated DNA-binding protein YccV like
ABT66_RS04700	SM00881	CoA binding domain
ABT66_RS04710	SM00851	MGS-like domain
ABT66_RS04780	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS04785	SM00981	ABT66_RS04785
ABT66_RS04930	SM00635	Bacterial Ig-like domain 2
ABT66_RS05065	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05085	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS05150	SM00344	helix_turn_helix ASNC type
ABT66_RS05170	SM00849	Metallo-beta-lactamase superfamily
ABT66_RS05240	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05245	SM00849	Metallo-beta-lactamase superfamily
ABT66_RS05250	SM00411	bacterial (prokaryotic) histone like domain
ABT66_RS05255	SM00316	Ribosomal protein S1-like RNA-binding domain
ABT66_RS05335	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS05345	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05355	SM00843	ABT66_RS05355
ABT66_RS05360	SM00344	helix_turn_helix ASNC type
ABT66_RS05375	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05380	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05395	SM00316	Ribosomal protein S1-like RNA-binding domain
ABT66_RS05435	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05435	SM01086	C-terminal, D2-small domain, of ClpB protein
ABT66_RS05445	SM00357	Cold shock protein domain
ABT66_RS05455	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05515	SM00644	ABT66_RS05515
ABT66_RS05530	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05535	SM00062	Bacterial periplasmic substrate-binding proteins
ABT66_RS05535	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ABT66_RS05550	SM00062	Bacterial periplasmic substrate-binding proteins
ABT66_RS05550	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ABT66_RS05595	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05660	SM00014	Acid phosphatase homologues
ABT66_RS05665	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS05665	SM01134	ABT66_RS05665
ABT66_RS05670	SM00936	Penicillin-binding protein 5, C-terminal domain 
ABT66_RS05720	SM00893	Electron transfer flavoprotein domain
ABT66_RS05725	SM00893	Electron transfer flavoprotein domain
ABT66_RS05745	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABT66_RS05765	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05775	SM00852	Probable molybdopterin binding domain
ABT66_RS05815	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05830	SM00529	Helix-turn-helix diphteria tox regulatory element
ABT66_RS05860	SM00062	Bacterial periplasmic substrate-binding proteins
ABT66_RS05860	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ABT66_RS05870	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05900	SM00487	DEAD-like helicases superfamily
ABT66_RS05900	SM00488	ABT66_RS05900
ABT66_RS05900	SM00491	ABT66_RS05900
ABT66_RS05905	SM00487	DEAD-like helicases superfamily
ABT66_RS05905	SM00490	helicase superfamily c-terminal domain
ABT66_RS05920	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS05945	SM00155	Phospholipase D. Active site motifs.
ABT66_RS05995	SM00852	Probable molybdopterin binding domain
ABT66_RS06000	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABT66_RS06010	SM00364	Leucine-rich repeats, bacterial type
ABT66_RS06010	SM00369	Leucine-rich repeats, typical (most populated) subfamily
ABT66_RS06020	SM00487	DEAD-like helicases superfamily
ABT66_RS06020	SM00490	helicase superfamily c-terminal domain
ABT66_RS06045	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABT66_RS06045	SM00876	Biotin and Thiamin Synthesis associated domain
ABT66_RS06070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS06070	SM00866	ABT66_RS06070
ABT66_RS06100	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS06130	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS06165	SM00855	Phosphoglycerate mutase family
ABT66_RS06170	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS06340	SM00881	CoA binding domain
ABT66_RS06355	SM00861	Transketolase, pyrimidine binding domain
ABT66_RS06400	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
ABT66_RS06400	SM01232	ABT66_RS06400
ABT66_RS06425	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS06475	SM00797	Allophanate hydrolase subunit 2
ABT66_RS06480	SM00796	Allophanate hydrolase subunit 1
ABT66_RS06530	SM00387	Histidine kinase-like ATPases
ABT66_RS06530	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS06535	SM00448	cheY-homologous receiver domain
ABT66_RS06535	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS06700	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABT66_RS06715	SM00116	Domain in cystathionine beta-synthase and other proteins.
ABT66_RS06715	SM01091	Transporter associated domain
ABT66_RS06730	SM00062	Bacterial periplasmic substrate-binding proteins
ABT66_RS06775	SM00271	DnaJ molecular chaperone homology domain
ABT66_RS06785	SM00671	Sel1-like repeats.
ABT66_RS06795	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS06810	SM00858	ABT66_RS06810
ABT66_RS06840	SM00855	Phosphoglycerate mutase family
ABT66_RS06870	SM00936	Penicillin-binding protein 5, C-terminal domain 
ABT66_RS06890	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABT66_RS06910	SM00357	Cold shock protein domain
ABT66_RS06925	SM00448	cheY-homologous receiver domain
ABT66_RS06930	SM00091	PAS domain
ABT66_RS06930	SM00387	Histidine kinase-like ATPases
ABT66_RS06940	SM00764	Citrate lyase ligase C-terminal domain
ABT66_RS07015	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS07050	SM00470	ParB-like nuclease domain
ABT66_RS07080	SM00822	ABT66_RS07080
ABT66_RS07120	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07130	SM00824	Thioesterase
ABT66_RS07135	SM00923	MbtH-like protein
ABT66_RS07165	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS07215	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07220	SM00869	Autotransporter beta-domain
ABT66_RS07260	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS07270	SM00387	Histidine kinase-like ATPases
ABT66_RS07310	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS07325	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS07325	SM00448	cheY-homologous receiver domain
ABT66_RS07390	SM00840	ABT66_RS07390
ABT66_RS07410	SM01001	AIR carboxylase
ABT66_RS07495	SM00346	helix_turn_helix isocitrate lyase regulation
ABT66_RS07510	SM00450	Rhodanese Homology Domain
ABT66_RS07520	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07520	SM00930	ABT66_RS07520
ABT66_RS07540	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07550	SM00822	ABT66_RS07550
ABT66_RS07565	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07570	SM00244	prohibitin homologues
ABT66_RS07580	SM00422	helix_turn_helix, mercury resistance
ABT66_RS07650	SM00387	Histidine kinase-like ATPases
ABT66_RS07655	SM00493	ABT66_RS07655
ABT66_RS07665	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07730	SM01266	ABT66_RS07730
ABT66_RS07750	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS07780	SM00938	Nitrogen regulatory protein P-II
ABT66_RS07785	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07790	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07795	SM00344	helix_turn_helix ASNC type
ABT66_RS07835	SM00411	bacterial (prokaryotic) histone like domain
ABT66_RS07840	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07840	SM00464	Found in ATP-dependent protease La (LON)
ABT66_RS07845	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07845	SM00994	ClpX C4-type zinc finger
ABT66_RS07845	SM01086	C-terminal, D2-small domain, of ClpB protein
ABT66_RS07910	SM00671	Sel1-like repeats.
ABT66_RS07915	SM00671	Sel1-like repeats.
ABT66_RS07950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS07950	SM00866	ABT66_RS07950
ABT66_RS07960	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS07975	SM00981	ABT66_RS07975
ABT66_RS07990	SM00861	Transketolase, pyrimidine binding domain
ABT66_RS08050	SM00507	HNH nucleases
ABT66_RS08075	SM01323	ABT66_RS08075
ABT66_RS08105	SM00642	Alpha-amylase domain
ABT66_RS08120	SM00091	PAS domain
ABT66_RS08120	SM00387	Histidine kinase-like ATPases
ABT66_RS08120	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS08125	SM00448	cheY-homologous receiver domain
ABT66_RS08125	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS08185	SM00267	diguanylate cyclase
ABT66_RS08250	SM00869	Autotransporter beta-domain
ABT66_RS08255	SM01004	Delta-aminolevulinic acid dehydratase
ABT66_RS08280	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS08300	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS08345	SM00422	helix_turn_helix, mercury resistance
ABT66_RS08395	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS08400	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS08515	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
ABT66_RS08820	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS08820	SM01086	C-terminal, D2-small domain, of ClpB protein
ABT66_RS08860	SM00479	ABT66_RS08860
ABT66_RS08875	SM00849	Metallo-beta-lactamase superfamily
ABT66_RS08880	SM00257	Lysin motif
ABT66_RS08995	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ABT66_RS09015	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS09125	SM00487	DEAD-like helicases superfamily
ABT66_RS09125	SM00490	helicase superfamily c-terminal domain
ABT66_RS09130	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS09145	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS09145	SM01086	C-terminal, D2-small domain, of ClpB protein
ABT66_RS09210	SM01133	ABT66_RS09210
ABT66_RS09230	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS09255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS09255	SM00866	ABT66_RS09255
ABT66_RS09495	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS09510	SM00448	cheY-homologous receiver domain
ABT66_RS09510	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS09515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS09515	SM00387	Histidine kinase-like ATPases
ABT66_RS09515	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS09565	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS09570	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS09585	SM01007	Class II Aldolase and Adducin N-terminal domain
ABT66_RS09600	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS09630	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS09655	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS09675	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS09700	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS09700	SM01134	ABT66_RS09700
ABT66_RS09715	SM01133	ABT66_RS09715
ABT66_RS09770	SM01230	ABT66_RS09770
ABT66_RS09785	SM00091	PAS domain
ABT66_RS09785	SM00387	Histidine kinase-like ATPases
ABT66_RS09785	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS09790	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS09790	SM00448	cheY-homologous receiver domain
ABT66_RS09800	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABT66_RS09820	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
ABT66_RS09820	SM00474	3'-5' exonuclease
ABT66_RS09820	SM00475	5'-3' exonuclease
ABT66_RS09820	SM00482	DNA polymerase A domain
ABT66_RS09830	SM00563	Phosphate acyltransferases
ABT66_RS09935	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
ABT66_RS10030	SM00341	Helicase and RNase D C-terminal
ABT66_RS10030	SM00487	DEAD-like helicases superfamily
ABT66_RS10030	SM00490	helicase superfamily c-terminal domain
ABT66_RS10030	SM00956	ABT66_RS10030
ABT66_RS10115	SM01219	ABT66_RS10115
ABT66_RS10210	SM00984	UDP binding domain
ABT66_RS10230	SM00357	Cold shock protein domain
ABT66_RS10230	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS10230	SM00959	Rho termination factor, N-terminal domain
ABT66_RS10240	SM00487	DEAD-like helicases superfamily
ABT66_RS10240	SM00490	helicase superfamily c-terminal domain
ABT66_RS10325	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS10370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS10370	SM00895	ABT66_RS10370
ABT66_RS10380	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS10400	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS10415	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS10420	SM00327	von Willebrand factor (vWF) type A domain
ABT66_RS10430	SM00344	helix_turn_helix ASNC type
ABT66_RS10440	SM01228	ABT66_RS10440
ABT66_RS10485	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS10545	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS10595	SM01234	ABT66_RS10595
ABT66_RS10610	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS10610	SM00760	Bacterial dnaA protein helix-turn-helix domain
ABT66_RS10615	SM00480	DNA polymerase III beta subunit
ABT66_RS10625	SM00387	Histidine kinase-like ATPases
ABT66_RS10625	SM00433	TopoisomeraseII
ABT66_RS10635	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABT66_RS10650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS10650	SM00895	ABT66_RS10650
ABT66_RS10665	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABT66_RS10675	SM00073	Histidine Phosphotransfer domain
ABT66_RS10675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS10675	SM00387	Histidine kinase-like ATPases
ABT66_RS10675	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS10675	SM00448	cheY-homologous receiver domain
ABT66_RS10685	SM00448	cheY-homologous receiver domain
ABT66_RS10685	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS10705	SM01235	ABT66_RS10705
ABT66_RS10710	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS10845	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS10845	SM01134	ABT66_RS10845
ABT66_RS10865	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS10865	SM00448	cheY-homologous receiver domain
ABT66_RS10870	SM00387	Histidine kinase-like ATPases
ABT66_RS10890	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS10890	SM00866	ABT66_RS10890
ABT66_RS10935	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS10960	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS11010	SM00831	Cation transporter/ATPase, N-terminus
ABT66_RS11030	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS11040	SM00869	Autotransporter beta-domain
ABT66_RS11090	SM00487	DEAD-like helicases superfamily
ABT66_RS11090	SM00490	helicase superfamily c-terminal domain
ABT66_RS11100	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ABT66_RS11100	SM00954	Region found in RelA / SpoT proteins
ABT66_RS11105	SM01409	ABT66_RS11105
ABT66_RS11110	SM00072	Guanylate kinase homologues.
ABT66_RS11115	SM00532	Ligase N family
ABT66_RS11130	SM00849	Metallo-beta-lactamase superfamily
ABT66_RS11190	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
ABT66_RS11190	SM01232	ABT66_RS11190
ABT66_RS11280	SM00829	Enoylreductase
ABT66_RS11310	SM00450	Rhodanese Homology Domain
ABT66_RS11330	SM00971	Serine acetyltransferase, N-terminal
ABT66_RS11340	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABT66_RS11350	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS11365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS11365	SM00895	ABT66_RS11365
ABT66_RS11450	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS11455	SM01007	Class II Aldolase and Adducin N-terminal domain
ABT66_RS11465	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
ABT66_RS11505	SM00346	helix_turn_helix isocitrate lyase regulation
ABT66_RS11520	SM00642	Alpha-amylase domain
ABT66_RS11530	SM00047	Lysozyme subfamily 2
ABT66_RS11535	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS11590	SM00357	Cold shock protein domain
ABT66_RS11680	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS11710	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS11715	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS11780	SM00028	Tetratricopeptide repeats
ABT66_RS11790	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS11790	SM00267	diguanylate cyclase
ABT66_RS11810	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS11835	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS11855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS11855	SM00866	ABT66_RS11855
ABT66_RS11875	SM00870	ABT66_RS11875
ABT66_RS11940	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS11985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABT66_RS11985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS11985	SM00319	Homologues of the ligand binding domain of Tar
ABT66_RS12015	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS12015	SM00962	SRP54-type protein, GTPase domain
ABT66_RS12015	SM00963	SRP54-type protein, helical bundle domain
ABT66_RS12020	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS12065	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS12070	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS12100	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS12135	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS12160	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS12180	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ABT66_RS12185	SM00642	Alpha-amylase domain
ABT66_RS12190	SM00642	Alpha-amylase domain
ABT66_RS12210	SM00346	helix_turn_helix isocitrate lyase regulation
ABT66_RS12215	SM01130	ABT66_RS12215
ABT66_RS12250	SM00450	Rhodanese Homology Domain
ABT66_RS12260	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS12260	SM01134	ABT66_RS12260
ABT66_RS12265	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS12315	SM00899	ABT66_RS12315
ABT66_RS12325	SM00316	Ribosomal protein S1-like RNA-binding domain
ABT66_RS12325	SM00732	Likely ribonuclease with RNase H fold.
ABT66_RS12335	SM00448	cheY-homologous receiver domain
ABT66_RS12335	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS12340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS12340	SM00387	Histidine kinase-like ATPases
ABT66_RS12340	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS12360	SM00363	S4 RNA-binding domain
ABT66_RS12405	SM00965	Secretin and TonB N terminus short domain
ABT66_RS12515	SM00100	Cyclic nucleotide-monophosphate binding domain
ABT66_RS12515	SM00419	helix_turn_helix, cAMP Regulatory protein
ABT66_RS12550	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS12615	SM00838	Elongation factor G C-terminus
ABT66_RS12615	SM00889	Elongation factor G, domain IV
ABT66_RS12655	SM01403	ABT66_RS12655
ABT66_RS12675	SM01382	ABT66_RS12675
ABT66_RS12675	SM01383	ABT66_RS12675
ABT66_RS12690	SM00322	K homology RNA-binding domain
ABT66_RS12710	SM01374	ABT66_RS12710
ABT66_RS12715	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
ABT66_RS12780	SM00363	S4 RNA-binding domain
ABT66_RS12780	SM01390	ABT66_RS12780
ABT66_RS12785	SM00662	RNA polymerases D
ABT66_RS12800	SM00422	helix_turn_helix, mercury resistance
ABT66_RS12920	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS12920	SM00267	diguanylate cyclase
ABT66_RS12960	SM00878	Biotin carboxylase C-terminal domain
ABT66_RS12980	SM00829	Enoylreductase
ABT66_RS12985	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS12985	SM00267	diguanylate cyclase
ABT66_RS13020	SM00316	Ribosomal protein S1-like RNA-binding domain
ABT66_RS13080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS13085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS13085	SM00895	ABT66_RS13085
ABT66_RS13125	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ABT66_RS13130	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ABT66_RS13170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS13170	SM00895	ABT66_RS13170
ABT66_RS13175	SM01130	ABT66_RS13175
ABT66_RS13230	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABT66_RS13235	SM00073	Histidine Phosphotransfer domain
ABT66_RS13235	SM00091	PAS domain
ABT66_RS13235	SM00387	Histidine kinase-like ATPases
ABT66_RS13235	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS13235	SM00448	cheY-homologous receiver domain
ABT66_RS13285	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS13315	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS13390	SM01103	ABT66_RS13390
ABT66_RS13405	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS13450	SM00316	Ribosomal protein S1-like RNA-binding domain
ABT66_RS13450	SM00322	K homology RNA-binding domain
ABT66_RS13470	SM01387	ABT66_RS13470
ABT66_RS13475	SM00316	Ribosomal protein S1-like RNA-binding domain
ABT66_RS13475	SM00322	K homology RNA-binding domain
ABT66_RS13480	SM00028	Tetratricopeptide repeats
ABT66_RS13485	SM00487	DEAD-like helicases superfamily
ABT66_RS13485	SM00490	helicase superfamily c-terminal domain
ABT66_RS13520	SM00465	GIY-YIG type nucleases (URI domain)
ABT66_RS13535	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ABT66_RS13540	SM00749	bacterial OsmY and nodulation domain
ABT66_RS13565	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS13565	SM01134	ABT66_RS13565
ABT66_RS13570	SM00829	Enoylreductase
ABT66_RS13600	SM00858	ABT66_RS13600
ABT66_RS13775	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ABT66_RS13775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABT66_RS13780	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABT66_RS13780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS14010	SM00400	zinc finger
ABT66_RS14010	SM00493	ABT66_RS14010
ABT66_RS14010	SM00766	DNA primase DnaG DnaB-binding
ABT66_RS14035	SM01207	ABT66_RS14035
ABT66_RS14040	SM00905	Dihydroneopterin aldolase
ABT66_RS14050	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ABT66_RS14055	SM00287	Bacterial SH3 domain homologues
ABT66_RS14060	SM01118	ABT66_RS14060
ABT66_RS14080	SM00244	prohibitin homologues
ABT66_RS14175	SM00387	Histidine kinase-like ATPases
ABT66_RS14175	SM00433	TopoisomeraseII
ABT66_RS14190	SM00387	Histidine kinase-like ATPases
ABT66_RS14190	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS14195	SM00448	cheY-homologous receiver domain
ABT66_RS14195	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS14205	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS14205	SM00871	Bacterial transcription activator, effector binding domain
ABT66_RS14210	SM00434	DNA Topoisomerase IV
ABT66_RS14215	SM00563	Phosphate acyltransferases
ABT66_RS14240	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABT66_RS14270	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS14325	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABT66_RS14325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS14405	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABT66_RS14480	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS14555	SM00478	endonuclease III
ABT66_RS14555	SM00525	ABT66_RS14555
ABT66_RS14580	SM00870	ABT66_RS14580
ABT66_RS14590	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABT66_RS14600	SM01152	ABT66_RS14600
ABT66_RS14615	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS14620	SM00346	helix_turn_helix isocitrate lyase regulation
ABT66_RS14625	SM00732	Likely ribonuclease with RNase H fold.
ABT66_RS14650	SM00731	SprT homologues.
ABT66_RS14690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS14690	SM00895	ABT66_RS14690
ABT66_RS14710	SM00829	Enoylreductase
ABT66_RS14740	SM00861	Transketolase, pyrimidine binding domain
ABT66_RS14775	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS14780	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS14805	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
ABT66_RS14880	SM01011	Aminopeptidase P, N-terminal domain
ABT66_RS14925	SM01022	ABT66_RS14925
ABT66_RS15000	SM00257	Lysin motif
ABT66_RS15150	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS15155	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS15160	SM00563	Phosphate acyltransferases
ABT66_RS15185	SM00927	DNA mismatch repair enzyme MutH
ABT66_RS15195	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ABT66_RS15250	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS15260	SM00646	ABT66_RS15260
ABT66_RS15275	SM00925	MltA specific insert domain
ABT66_RS15320	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS15320	SM01134	ABT66_RS15320
ABT66_RS15345	SM01007	Class II Aldolase and Adducin N-terminal domain
ABT66_RS15420	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABT66_RS15425	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABT66_RS15435	SM00073	Histidine Phosphotransfer domain
ABT66_RS15435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS15435	SM00387	Histidine kinase-like ATPases
ABT66_RS15435	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS15435	SM00448	cheY-homologous receiver domain
ABT66_RS15445	SM00954	Region found in RelA / SpoT proteins
ABT66_RS15500	SM01192	ABT66_RS15500
ABT66_RS15500	SM01193	ABT66_RS15500
ABT66_RS15510	SM00849	Metallo-beta-lactamase superfamily
ABT66_RS15580	SM01101	ABT66_RS15580
ABT66_RS15650	SM00257	Lysin motif
ABT66_RS15675	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABT66_RS15680	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS15680	SM01134	ABT66_RS15680
ABT66_RS15695	SM01007	Class II Aldolase and Adducin N-terminal domain
ABT66_RS15730	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
ABT66_RS15730	SM00534	ATPase domain of DNA mismatch repair MUTS family
ABT66_RS15800	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS15825	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS15905	SM00194	Protein tyrosine phosphatase, catalytic domain
ABT66_RS15905	SM00404	Protein tyrosine phosphatase, catalytic domain motif
ABT66_RS15915	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS15920	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS15960	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS15990	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS16005	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ABT66_RS16005	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS16105	SM00849	Metallo-beta-lactamase superfamily
ABT66_RS16110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ABT66_RS16110	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS16120	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS16120	SM01134	ABT66_RS16120
ABT66_RS16165	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS16180	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ABT66_RS16255	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABT66_RS16275	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS16310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS16335	SM00528	Domain in histone-like proteins of HNS family
ABT66_RS16345	SM00450	Rhodanese Homology Domain
ABT66_RS16350	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ABT66_RS16360	SM00257	Lysin motif
ABT66_RS16360	SM00749	bacterial OsmY and nodulation domain
ABT66_RS16365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS16365	SM00895	ABT66_RS16365
ABT66_RS16410	SM00448	cheY-homologous receiver domain
ABT66_RS16410	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS16415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS16415	SM00387	Histidine kinase-like ATPases
ABT66_RS16415	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS16475	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS16490	SM00857	Resolvase, N terminal domain
ABT66_RS16510	SM00493	ABT66_RS16510
ABT66_RS16510	SM00778	Zinc-binding domain of primase-helicase
ABT66_RS16510	SM00885	D5 N terminal like
ABT66_RS16580	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS16640	SM01091	Transporter associated domain
ABT66_RS16655	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS16655	SM00962	SRP54-type protein, GTPase domain
ABT66_RS16655	SM00963	SRP54-type protein, helical bundle domain
ABT66_RS16680	SM00267	diguanylate cyclase
ABT66_RS16695	SM00830	Chorismate mutase type II
ABT66_RS16705	SM00830	Chorismate mutase type II
ABT66_RS16720	SM00363	S4 RNA-binding domain
ABT66_RS16730	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS16730	SM01086	C-terminal, D2-small domain, of ClpB protein
ABT66_RS16770	SM00155	Phospholipase D. Active site motifs.
ABT66_RS16775	SM00881	CoA binding domain
ABT66_RS16780	SM01144	ABT66_RS16780
ABT66_RS16795	SM00967	RNA 2'-O ribose methyltransferase substrate binding
ABT66_RS16800	SM00986	Uracil DNA glycosylase superfamily
ABT66_RS16800	SM00987	UreE urease accessory protein, C-terminal domain 
ABT66_RS16820	SM00487	DEAD-like helicases superfamily
ABT66_RS16820	SM00490	helicase superfamily c-terminal domain
ABT66_RS16915	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS17090	SM00635	Bacterial Ig-like domain 2
ABT66_RS17120	SM00232	JAB/MPN domain
ABT66_RS17130	SM00060	Fibronectin type 3 domain
ABT66_RS17145	SM00506	Appr-1"-p processing enzyme
ABT66_RS17210	SM00358	Double-stranded RNA binding motif
ABT66_RS17210	SM00535	Ribonuclease III family
ABT66_RS17280	SM00062	Bacterial periplasmic substrate-binding proteins
ABT66_RS17290	SM01211	ABT66_RS17290
ABT66_RS17295	SM00387	Histidine kinase-like ATPases
ABT66_RS17295	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS17305	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS17305	SM00448	cheY-homologous receiver domain
ABT66_RS17310	SM00938	Nitrogen regulatory protein P-II
ABT66_RS17330	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS17415	SM00271	DnaJ molecular chaperone homology domain
ABT66_RS17465	SM00450	Rhodanese Homology Domain
ABT66_RS17470	SM01359	ABT66_RS17470
ABT66_RS17470	SM01360	ABT66_RS17470
ABT66_RS17480	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS17500	SM00562	ABT66_RS17500
ABT66_RS17515	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS17535	SM00564	beta-propeller repeat
ABT66_RS17575	SM00869	Autotransporter beta-domain
ABT66_RS17585	SM00116	Domain in cystathionine beta-synthase and other proteins.
ABT66_RS17585	SM01240	ABT66_RS17585
ABT66_RS17625	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS17625	SM00267	diguanylate cyclase
ABT66_RS17710	SM01130	ABT66_RS17710
ABT66_RS17755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS17755	SM00387	Histidine kinase-like ATPases
ABT66_RS17785	SM00861	Transketolase, pyrimidine binding domain
ABT66_RS17800	SM00919	Malic enzyme, NAD binding domain
ABT66_RS17800	SM01274	ABT66_RS17800
ABT66_RS17805	SM00877	ABT66_RS17805
ABT66_RS17830	SM00877	ABT66_RS17830
ABT66_RS17875	SM00877	ABT66_RS17875
ABT66_RS17880	SM00877	ABT66_RS17880
ABT66_RS17885	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS17905	SM00646	ABT66_RS17905
ABT66_RS17930	SM00822	ABT66_RS17930
ABT66_RS17950	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS17980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS18020	SM00771	ZipA, C-terminal domain (FtsZ-binding)
ABT66_RS18025	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ABT66_RS18025	SM00292	breast cancer carboxy-terminal domain
ABT66_RS18025	SM00532	Ligase N family
ABT66_RS18120	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS18120	SM00267	diguanylate cyclase
ABT66_RS18200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS18200	SM00387	Histidine kinase-like ATPases
ABT66_RS18200	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS18205	SM00448	cheY-homologous receiver domain
ABT66_RS18255	SM00463	Small MutS-related domain
ABT66_RS18295	SM00825	Beta-ketoacyl synthase
ABT66_RS18315	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS18340	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ABT66_RS18380	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS18415	SM00062	Bacterial periplasmic substrate-binding proteins
ABT66_RS18420	SM00062	Bacterial periplasmic substrate-binding proteins
ABT66_RS18435	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS18465	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS18495	SM00861	Transketolase, pyrimidine binding domain
ABT66_RS18535	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ABT66_RS18580	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
ABT66_RS18585	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS18585	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
ABT66_RS18625	SM00260	Two component signalling adaptor domain
ABT66_RS18625	SM00448	cheY-homologous receiver domain
ABT66_RS18665	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABT66_RS18730	SM00852	Probable molybdopterin binding domain
ABT66_RS18735	SM00346	helix_turn_helix isocitrate lyase regulation
ABT66_RS18740	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABT66_RS18825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS18825	SM00895	ABT66_RS18825
ABT66_RS18835	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABT66_RS18845	SM00434	DNA Topoisomerase IV
ABT66_RS18850	SM00387	Histidine kinase-like ATPases
ABT66_RS18850	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS18850	SM00448	cheY-homologous receiver domain
ABT66_RS18855	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS18855	SM00448	cheY-homologous receiver domain
ABT66_RS18860	SM00387	Histidine kinase-like ATPases
ABT66_RS18880	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS18890	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS18910	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS18935	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS18975	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS18975	SM00448	cheY-homologous receiver domain
ABT66_RS19005	SM00364	Leucine-rich repeats, bacterial type
ABT66_RS19005	SM00369	Leucine-rich repeats, typical (most populated) subfamily
ABT66_RS19050	SM00487	DEAD-like helicases superfamily
ABT66_RS19050	SM00490	helicase superfamily c-terminal domain
ABT66_RS19055	SM00363	S4 RNA-binding domain
ABT66_RS19075	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS19095	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS19110	SM00014	Acid phosphatase homologues
ABT66_RS19120	SM00841	Elongation factor P, C-terminal
ABT66_RS19120	SM01185	ABT66_RS19120
ABT66_RS19165	SM00518	AP endonuclease family 2
ABT66_RS19210	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS19235	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS19245	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS19365	SM01217	ABT66_RS19365
ABT66_RS19380	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS19395	SM00422	helix_turn_helix, mercury resistance
ABT66_RS19400	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ABT66_RS19400	SM00387	Histidine kinase-like ATPases
ABT66_RS19405	SM00448	cheY-homologous receiver domain
ABT66_RS19405	SM00850	LytTr DNA-binding domain
ABT66_RS19480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS19480	SM00866	ABT66_RS19480
ABT66_RS19500	SM01133	ABT66_RS19500
ABT66_RS19505	SM00046	Diacylglycerol kinase catalytic domain (presumed)
ABT66_RS19550	SM00448	cheY-homologous receiver domain
ABT66_RS19550	SM00862	Transcriptional regulatory protein, C terminal
ABT66_RS19555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS19555	SM00387	Histidine kinase-like ATPases
ABT66_RS19555	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS19590	SM00478	endonuclease III
ABT66_RS19590	SM01009	AlkA N-terminal domain
ABT66_RS19595	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS19595	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ABT66_RS19595	SM00091	PAS domain
ABT66_RS19595	SM00267	diguanylate cyclase
ABT66_RS19615	SM01091	Transporter associated domain
ABT66_RS19630	SM00226	Low molecular weight phosphatase family
ABT66_RS19825	SM01350	ABT66_RS19825
ABT66_RS19835	SM00984	UDP binding domain
ABT66_RS19905	SM00479	ABT66_RS19905
ABT66_RS19925	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS19940	SM00936	Penicillin-binding protein 5, C-terminal domain 
ABT66_RS19945	SM00871	Bacterial transcription activator, effector binding domain
ABT66_RS19975	SM00877	ABT66_RS19975
ABT66_RS19980	SM00877	ABT66_RS19980
ABT66_RS20020	SM00877	ABT66_RS20020
ABT66_RS20025	SM00877	ABT66_RS20025
ABT66_RS20055	SM00877	ABT66_RS20055
ABT66_RS20060	SM00877	ABT66_RS20060
ABT66_RS20070	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS20150	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS20185	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ABT66_RS20190	SM00226	Low molecular weight phosphatase family
ABT66_RS20200	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS20260	SM00671	Sel1-like repeats.
ABT66_RS20330	SM00357	Cold shock protein domain
ABT66_RS20355	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ABT66_RS20385	SM00267	diguanylate cyclase
ABT66_RS20405	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS20455	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS20500	SM00642	Alpha-amylase domain
ABT66_RS20540	SM00062	Bacterial periplasmic substrate-binding proteins
ABT66_RS20540	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ABT66_RS20555	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS20560	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS20575	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS20575	SM00448	cheY-homologous receiver domain
ABT66_RS20580	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ABT66_RS20580	SM00465	GIY-YIG type nucleases (URI domain)
ABT66_RS20705	SM00073	Histidine Phosphotransfer domain
ABT66_RS20705	SM00260	Two component signalling adaptor domain
ABT66_RS20705	SM00387	Histidine kinase-like ATPases
ABT66_RS20705	SM01231	ABT66_RS20705
ABT66_RS20710	SM00260	Two component signalling adaptor domain
ABT66_RS20715	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABT66_RS20715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS20715	SM00319	Homologues of the ligand binding domain of Tar
ABT66_RS20720	SM00138	Methyltransferase, chemotaxis proteins 
ABT66_RS20725	SM00448	cheY-homologous receiver domain
ABT66_RS20730	SM00448	cheY-homologous receiver domain
ABT66_RS20765	SM00836	DALR anticodon binding domain
ABT66_RS20765	SM01016	Arginyl tRNA synthetase N terminal dom
ABT66_RS20840	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ABT66_RS20845	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS20855	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS20865	SM00257	Lysin motif
ABT66_RS20935	SM00479	ABT66_RS20935
ABT66_RS21005	SM00506	Appr-1"-p processing enzyme
ABT66_RS21170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ABT66_RS21175	SM00945	ProQ/FINO family
ABT66_RS21180	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ABT66_RS21180	SM00245	tail specific protease
ABT66_RS21195	SM00346	helix_turn_helix isocitrate lyase regulation
ABT66_RS21220	SM00357	Cold shock protein domain
ABT66_RS21270	SM01091	Transporter associated domain
ABT66_RS21275	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS21305	SM00487	DEAD-like helicases superfamily
ABT66_RS21305	SM00491	ABT66_RS21305
ABT66_RS21330	SM00341	Helicase and RNase D C-terminal
ABT66_RS21330	SM00474	3'-5' exonuclease
ABT66_RS21390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS21405	SM01005	Alanine racemase, C-terminal domain
ABT66_RS21410	SM01091	Transporter associated domain
ABT66_RS21440	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ABT66_RS21525	SM01400	ABT66_RS21525
ABT66_RS21545	SM00937	ABT66_RS21545
ABT66_RS21590	SM00421	helix_turn_helix, Lux Regulon
ABT66_RS21590	SM00448	cheY-homologous receiver domain
ABT66_RS21595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS21595	SM00387	Histidine kinase-like ATPases
ABT66_RS21610	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS21635	SM00671	Sel1-like repeats.
ABT66_RS21685	SM00448	cheY-homologous receiver domain
ABT66_RS21695	SM00528	Domain in histone-like proteins of HNS family
ABT66_RS21735	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS21740	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS21755	SM00155	Phospholipase D. Active site motifs.
ABT66_RS21845	SM00481	DNA polymerase alpha chain like domain
ABT66_RS21855	SM00363	S4 RNA-binding domain
ABT66_RS21865	SM00822	ABT66_RS21865
ABT66_RS21885	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
ABT66_RS21885	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
ABT66_RS21885	SM00493	ABT66_RS21885
ABT66_RS21920	SM00014	Acid phosphatase homologues
ABT66_RS21935	SM00028	Tetratricopeptide repeats
ABT66_RS21940	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
ABT66_RS21955	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS21955	SM01134	ABT66_RS21955
ABT66_RS21965	SM00052	Putative diguanylate phosphodiesterase
ABT66_RS21965	SM00091	PAS domain
ABT66_RS21965	SM00267	diguanylate cyclase
ABT66_RS21975	SM00357	Cold shock protein domain
ABT66_RS21975	SM00955	ABT66_RS21975
ABT66_RS22010	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS22015	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS22035	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS22060	SM00450	Rhodanese Homology Domain
ABT66_RS22075	SM00091	PAS domain
ABT66_RS22075	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS22085	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABT66_RS22115	SM00822	ABT66_RS22115
ABT66_RS22135	SM00342	helix_turn_helix, arabinose operon control protein
ABT66_RS22135	SM00871	Bacterial transcription activator, effector binding domain
ABT66_RS22165	SM00873	B3/4 domain
ABT66_RS22170	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS22190	SM00100	Cyclic nucleotide-monophosphate binding domain
ABT66_RS22190	SM00419	helix_turn_helix, cAMP Regulatory protein
ABT66_RS22200	SM00463	Small MutS-related domain
ABT66_RS22210	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABT66_RS22225	SM00487	DEAD-like helicases superfamily
ABT66_RS22225	SM00490	helicase superfamily c-terminal domain
ABT66_RS22255	SM00890	Domain of unknown function
ABT66_RS22305	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS22305	SM00487	DEAD-like helicases superfamily
ABT66_RS22305	SM00490	helicase superfamily c-terminal domain
ABT66_RS22305	SM00847	Helicase associated domain (HA2)  Add an annotation
ABT66_RS22335	SM00382	ATPases associated with a variety of cellular activities
ABT66_RS22345	SM00062	Bacterial periplasmic substrate-binding proteins
ABT66_RS22375	SM00829	Enoylreductase
ABT66_RS22385	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABT66_RS22385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS22385	SM00319	Homologues of the ligand binding domain of Tar
ABT66_RS22395	SM01150	ABT66_RS22395
ABT66_RS22410	SM00867	YceI-like domain 
ABT66_RS22425	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS22425	SM01134	ABT66_RS22425
ABT66_RS22490	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS22525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS22575	SM00829	Enoylreductase
ABT66_RS22580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABT66_RS22580	SM00895	ABT66_RS22580
ABT66_RS22640	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS22680	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABT66_RS22700	SM00829	Enoylreductase
ABT66_RS22705	SM00919	Malic enzyme, NAD binding domain
ABT66_RS22705	SM01274	ABT66_RS22705
ABT66_RS22735	SM00642	Alpha-amylase domain
ABT66_RS22740	SM00642	Alpha-amylase domain
ABT66_RS22745	SM00642	Alpha-amylase domain
ABT66_RS22760	SM00354	helix_turn _helix lactose operon repressor
ABT66_RS22930	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ABT66_RS22995	SM00318	Staphylococcal nuclease homologues
ABT66_RS23045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABT66_RS23045	SM00387	Histidine kinase-like ATPases
ABT66_RS23045	SM00388	His Kinase A (phosphoacceptor) domain
ABT66_RS23070	SM01007	Class II Aldolase and Adducin N-terminal domain
ABT66_RS23090	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABT66_RS23090	SM01134	ABT66_RS23090
ABT66_RS23165	SM00857	Resolvase, N terminal domain
ABT66_RS23235	SM00530	Helix-turn-helix XRE-family like proteins 
ABT66_RS23245	SM00411	bacterial (prokaryotic) histone like domain
ABT66_RS23250	SM00318	Staphylococcal nuclease homologues
ABT66_RS23445	SM00479	ABT66_RS23445
ABT66_RS23515	SM00422	helix_turn_helix, mercury resistance
ABT66_RS23540	SM00422	helix_turn_helix, mercury resistance
ABT66_RS23550	SM00052	Putative diguanylate phosphodiesterase
