locus-tag class description AM374_RS00010 PF10411 Disulfide bond isomerase protein N-terminus AM374_RS00010 PF13098 Thioredoxin-like domain AM374_RS00035 PF08447 PAS fold AM374_RS00035 PF00563 EAL domain AM374_RS00035 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS00035 PF08448 PAS fold AM374_RS00040 PF06834 TraU protein AM374_RS00070 PF07728 AAA domain (dynein-related subfamily) AM374_RS00070 PF08406 CbbQ/NirQ/NorQ C-terminal AM374_RS00080 PF00436 Single-strand binding protein family AM374_RS00130 PF00111 2Fe-2S iron-sulfur cluster binding domain AM374_RS00245 PF02371 Transposase IS116/IS110/IS902 family AM374_RS00245 PF01548 Transposase AM374_RS00250 PF13700 Domain of unknown function (DUF4158) AM374_RS00250 PF01526 Tn3 transposase DDE domain AM374_RS00255 PF00239 Resolvase, N terminal domain AM374_RS00255 PF02796 Helix-turn-helix domain of resolvase AM374_RS00265 PF13495 Phage integrase, N-terminal SAM-like domain AM374_RS00265 PF00589 Phage integrase family AM374_RS00275 PF00893 Small Multidrug Resistance protein AM374_RS00280 PF00809 Pterin binding enzyme AM374_RS00300 PF13610 DDE domain AM374_RS00310 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM374_RS00315 PF01636 Phosphotransferase enzyme family AM374_RS00350 PF02522 Aminoglycoside 3-N-acetyltransferase AM374_RS00365 PF00239 Resolvase, N terminal domain AM374_RS00365 PF02796 Helix-turn-helix domain of resolvase AM374_RS00370 PF13700 Domain of unknown function (DUF4158) AM374_RS00370 PF01526 Tn3 transposase DDE domain AM374_RS00380 PF00376 MerR family regulatory protein AM374_RS00380 PF09278 MerR, DNA binding AM374_RS00385 PF02371 Transposase IS116/IS110/IS902 family AM374_RS00385 PF01548 Transposase AM374_RS00445 PF00589 Phage integrase family AM374_RS00445 PF02899 Phage integrase, N-terminal SAM-like domain AM374_RS00485 PF06122 Conjugative relaxosome accessory transposon protein AM374_RS00600 PF01343 Peptidase family S49 AM374_RS00645 PF00565 Staphylococcal nuclease homologue AM374_RS00650 PF00216 Bacterial DNA-binding protein AM374_RS00725 PF17862 AAA+ lid domain AM374_RS00725 PF01434 Peptidase family M41 AM374_RS00725 PF00004 ATPase family associated with various cellular activities (AAA) AM374_RS00810 PF13614 AAA domain AM374_RS00815 PF08535 KorB domain AM374_RS00815 PF06613 KorB C-terminal beta-barrel domain AM374_RS00815 PF02195 ParB-like nuclease domain AM374_RS00860 PF00145 C-5 cytosine-specific DNA methylase AM374_RS00890 PF01131 DNA topoisomerase AM374_RS00890 PF01751 Toprim domain AM374_RS00990 PF00144 Beta-lactamase AM374_RS00995 PF08212 Lipocalin-like domain AM374_RS01000 PF00893 Small Multidrug Resistance protein AM374_RS01005 PF00196 Bacterial regulatory proteins, luxR family AM374_RS01010 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM374_RS01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS01020 PF03466 LysR substrate binding domain AM374_RS01025 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM374_RS01030 PF00893 Small Multidrug Resistance protein AM374_RS01035 PF00809 Pterin binding enzyme AM374_RS01055 PF07091 Ribosomal RNA methyltransferase (FmrO) AM374_RS01075 PF00005 ABC transporter AM374_RS01075 PF12848 ABC transporter AM374_RS01080 PF01636 Phosphotransferase enzyme family AM374_RS01095 PF13610 DDE domain AM374_RS01135 PF02517 CPBP intramembrane metalloprotease AM374_RS01145 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM374_RS01150 PF00717 Peptidase S24-like AM374_RS01155 PF13438 Domain of unknown function (DUF4113) AM374_RS01155 PF00817 impB/mucB/samB family AM374_RS01155 PF11799 impB/mucB/samB family C-terminal domain AM374_RS01210 PF13610 DDE domain AM374_RS01215 PF02522 Aminoglycoside 3-N-acetyltransferase AM374_RS01250 PF02387 IncFII RepA protein family AM374_RS01360 PF03432 Relaxase/Mobilisation nuclease domain AM374_RS01385 PF00436 Single-strand binding protein family AM374_RS01400 PF03230 Antirestriction protein AM374_RS01420 PF05321 Haemolysin expression modulating protein AM374_RS01450 PF04002 RadC-like JAB domain AM374_RS01480 PF13091 PLD-like domain AM374_RS01490 PF06406 StbA protein AM374_RS01495 PF00589 Phage integrase family AM374_RS01530 PF13610 DDE domain AM374_RS01540 PF00753 Metallo-beta-lactamase superfamily AM374_RS01550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM374_RS01555 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS01560 PF12911 N-terminal TM domain of oligopeptide transport permease C AM374_RS01560 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS01565 PF04055 Radical SAM superfamily AM374_RS01565 PF18693 TRAM domain AM374_RS01565 PF00919 Uncharacterized protein family UPF0004 AM374_RS01570 PF10799 Biofilm formation protein (YliH/bssR) AM374_RS01575 PF07995 Glucose / Sorbosone dehydrogenase AM374_RS01580 PF00043 Glutathione S-transferase, C-terminal domain AM374_RS01580 PF13417 Glutathione S-transferase, N-terminal domain AM374_RS01585 PF00768 D-alanyl-D-alanine carboxypeptidase AM374_RS01585 PF07943 Penicillin-binding protein 5, C-terminal domain AM374_RS01590 PF00455 DeoR C terminal sensor domain AM374_RS01590 PF08220 DeoR-like helix-turn-helix domain AM374_RS01595 PF01569 PAP2 superfamily AM374_RS01600 PF07690 Major Facilitator Superfamily AM374_RS01610 PF07690 Major Facilitator Superfamily AM374_RS01615 PF00440 Bacterial regulatory proteins, tetR family AM374_RS01625 PF06826 Predicted Permease Membrane Region AM374_RS01625 PF02080 TrkA-C domain AM374_RS01635 PF11045 Putative inner membrane protein of Enterobacteriaceae AM374_RS01640 PF00462 Glutaredoxin AM374_RS01645 PF07214 Protein of unknown function (DUF1418) AM374_RS01655 PF18030 RimK PreATP-grasp domain AM374_RS01655 PF08443 RimK-like ATP-grasp domain AM374_RS01660 PF10722 Putative bacterial sensory transduction regulator AM374_RS01665 PF13416 Bacterial extracellular solute-binding protein AM374_RS01670 PF00005 ABC transporter AM374_RS01670 PF08402 TOBE domain AM374_RS01675 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS01680 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS01685 PF10767 Protein of unknown function (DUF2593) AM374_RS01690 PF05958 tRNA (Uracil-5-)-methyltransferase AM374_RS01695 PF03611 PTS system sugar-specific permease component AM374_RS01715 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM374_RS01720 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS01725 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS01730 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM374_RS01735 PF00005 ABC transporter AM374_RS01740 PF12883 Protein of unknown function (DUF3828) AM374_RS01745 PF01906 Putative heavy-metal-binding AM374_RS01750 PF01510 N-acetylmuramoyl-L-alanine amidase AM374_RS01755 PF01370 NAD dependent epimerase/dehydratase family AM374_RS01760 PF11066 Protein of unknown function (DUF2867) AM374_RS01760 PF13460 NAD(P)H-binding AM374_RS01765 PF01212 Beta-eliminating lyase AM374_RS01770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM374_RS01770 PF00205 Thiamine pyrophosphate enzyme, central domain AM374_RS01770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM374_RS01775 PF00111 2Fe-2S iron-sulfur cluster binding domain AM374_RS01775 PF00970 Oxidoreductase FAD-binding domain AM374_RS01775 PF00175 Oxidoreductase NAD-binding domain AM374_RS01780 PF03063 Prismane/CO dehydrogenase family AM374_RS01785 PF03956 Lysine exporter LysO AM374_RS01795 PF11398 Protein of unknown function (DUF2813) AM374_RS01800 PF04393 Protein of unknown function (DUF535) AM374_RS01805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM374_RS01810 PF02687 FtsX-like permease family AM374_RS01810 PF00005 ABC transporter AM374_RS01810 PF12704 MacB-like periplasmic core domain AM374_RS01815 PF00313 'Cold-shock' DNA-binding domain AM374_RS01820 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM374_RS01825 PF00004 ATPase family associated with various cellular activities (AAA) AM374_RS01825 PF02861 Clp amino terminal domain, pathogenicity island component AM374_RS01825 PF10431 C-terminal, D2-small domain, of ClpB protein AM374_RS01825 PF07724 AAA domain (Cdc48 subfamily) AM374_RS01825 PF17871 AAA lid domain AM374_RS01855 PF00857 Isochorismatase family AM374_RS01860 PF02678 Pirin AM374_RS01860 PF05726 Pirin C-terminal cupin domain AM374_RS01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS01865 PF03466 LysR substrate binding domain AM374_RS01870 PF01176 Translation initiation factor 1A / IF-1 AM374_RS01880 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM374_RS01885 PF00005 ABC transporter AM374_RS01885 PF00664 ABC transporter transmembrane region AM374_RS01890 PF00005 ABC transporter AM374_RS01890 PF00664 ABC transporter transmembrane region AM374_RS01895 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS01905 PF01037 Lrp/AsnC ligand binding domain AM374_RS01910 PF09397 Ftsk gamma domain AM374_RS01910 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM374_RS01910 PF17854 FtsK alpha domain AM374_RS01910 PF01580 FtsK/SpoIIIE family AM374_RS01915 PF03548 Outer membrane lipoprotein carrier protein LolA AM374_RS01920 PF12002 MgsA AAA+ ATPase C terminal AM374_RS01920 PF16193 AAA C-terminal domain AM374_RS01920 PF00004 ATPase family associated with various cellular activities (AAA) AM374_RS01930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM374_RS01930 PF02403 Seryl-tRNA synthetase N-terminal domain AM374_RS01935 PF00384 Molybdopterin oxidoreductase AM374_RS01935 PF01568 Molydopterin dinucleotide binding domain AM374_RS01935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS01940 PF12800 4Fe-4S binding domain AM374_RS01940 PF13247 4Fe-4S dicluster domain AM374_RS01945 PF04976 DMSO reductase anchor subunit (DmsC) AM374_RS01950 PF07690 Major Facilitator Superfamily AM374_RS01955 PF13520 Amino acid permease AM374_RS01960 PF04055 Radical SAM superfamily AM374_RS01970 PF11047 Salmonella outer protein D AM374_RS01975 PF01228 Glycine radical AM374_RS01975 PF02901 Pyruvate formate lyase-like AM374_RS01980 PF01226 Formate/nitrite transporter AM374_RS01985 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM374_RS01985 PF18381 YcaO cyclodehydratase C-terminal domain AM374_RS01990 PF04239 Protein of unknown function (DUF421) AM374_RS01995 PF00266 Aminotransferase class-V AM374_RS02000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM374_RS02005 PF01435 Peptidase family M48 AM374_RS02015 PF02224 Cytidylate kinase AM374_RS02020 PF00575 S1 RNA binding domain AM374_RS02025 PF00216 Bacterial DNA-binding protein AM374_RS02030 PF00753 Metallo-beta-lactamase superfamily AM374_RS02030 PF03772 Competence protein AM374_RS02035 PF00664 ABC transporter transmembrane region AM374_RS02035 PF00005 ABC transporter AM374_RS02040 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM374_RS02045 PF06224 Winged helix DNA-binding domain AM374_RS02050 PF03966 Trm112p-like protein AM374_RS02055 PF02348 Cytidylyltransferase AM374_RS02060 PF01636 Phosphotransferase enzyme family AM374_RS02065 PF02698 DUF218 domain AM374_RS02070 PF13847 Methyltransferase domain AM374_RS02075 PF17193 MukF C-terminal domain AM374_RS02075 PF17192 MukF middle domain AM374_RS02075 PF03882 MukF winged-helix domain AM374_RS02080 PF04288 MukE-like family AM374_RS02085 PF16330 MukB hinge domain AM374_RS02085 PF04310 MukB N-terminal AM374_RS02090 PF01471 Putative peptidoglycan binding domain AM374_RS02090 PF03734 L,D-transpeptidase catalytic domain AM374_RS02100 PF05951 Bacterial protein of unknown function (DUF882) AM374_RS02105 PF00753 Metallo-beta-lactamase superfamily AM374_RS02110 PF00155 Aminotransferase class I and II AM374_RS02115 PF00267 Gram-negative porin AM374_RS02120 PF01336 OB-fold nucleic acid binding domain AM374_RS02120 PF00152 tRNA synthetases class II (D, K and N) AM374_RS02125 PF13404 AsnC-type helix-turn-helix domain AM374_RS02125 PF01037 Lrp/AsnC ligand binding domain AM374_RS02135 PF00291 Pyridoxal-phosphate dependent enzyme AM374_RS02140 PF01235 Sodium:alanine symporter family AM374_RS02145 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM374_RS02145 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM374_RS02150 PF00589 Phage integrase family AM374_RS02150 PF12167 Arm DNA-binding domain AM374_RS02170 PF06630 Enterobacterial exodeoxyribonuclease VIII AM374_RS02170 PF12684 PDDEXK-like domain of unknown function (DUF3799) AM374_RS02185 PF01381 Helix-turn-helix AM374_RS02185 PF00717 Peptidase S24-like AM374_RS02205 PF06992 Replication protein P AM374_RS02240 PF06183 DinI-like family AM374_RS02270 PF03589 Antitermination protein AM374_RS02280 PF00959 Phage lysozyme AM374_RS02285 PF03245 Bacteriophage Rz lysis protein AM374_RS02455 PF06183 DinI-like family AM374_RS02460 PF01433 Peptidase family M1 domain AM374_RS02460 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM374_RS02460 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM374_RS02465 PF01180 Dihydroorotate dehydrogenase AM374_RS02470 PF07126 Cell-division protein ZapC AM374_RS02475 PF03473 MOSC domain AM374_RS02475 PF00111 2Fe-2S iron-sulfur cluster binding domain AM374_RS02475 PF03476 MOSC N-terminal beta barrel domain AM374_RS02480 PF01170 Putative RNA methylase family UPF0020 AM374_RS02480 PF10672 S-adenosylmethionine-dependent methyltransferase AM374_RS02480 PF02926 THUMP domain AM374_RS02485 PF16326 ABC transporter C-terminal domain AM374_RS02485 PF00005 ABC transporter AM374_RS02485 PF12848 ABC transporter AM374_RS02490 PF04403 Paraquat-inducible protein A AM374_RS02495 PF02470 MlaD protein AM374_RS02500 PF03886 ABC-type transport auxiliary lipoprotein component AM374_RS02505 PF04957 Ribosome modulation factor AM374_RS02510 PF07977 FabA-like domain AM374_RS02515 PF13654 AAA domain AM374_RS02515 PF05362 Lon protease (S16) C-terminal proteolytic domain AM374_RS02520 PF17414 MatP C-terminal ribbon-helix-helix domain AM374_RS02520 PF06303 MatP N-terminal domain AM374_RS02525 PF01389 OmpA-like transmembrane domain AM374_RS02525 PF00691 OmpA family AM374_RS02530 PF03846 Cell division inhibitor SulA AM374_RS02535 PF04993 TfoX N-terminal domain AM374_RS02535 PF04994 TfoX C-terminal domain AM374_RS02540 PF12805 FUSC-like inner membrane protein yccS AM374_RS02545 PF03733 Inner membrane component domain AM374_RS02550 PF12462 DNA helicase IV / RNA helicase N terminal AM374_RS02550 PF13361 UvrD-like helicase C-terminal domain AM374_RS02550 PF00580 UvrD/REP helicase N-terminal domain AM374_RS02555 PF02142 MGS-like domain AM374_RS02560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM374_RS02565 PF13380 CoA binding domain AM374_RS02570 PF08755 Hemimethylated DNA-binding protein YccV like AM374_RS02575 PF10672 S-adenosylmethionine-dependent methyltransferase AM374_RS02575 PF17785 PUA-like domain AM374_RS02580 PF01161 Phosphatidylethanolamine-binding protein AM374_RS02585 PF12833 Helix-turn-helix domain AM374_RS02590 PF00708 Acylphosphatase AM374_RS02595 PF04358 DsrC like protein AM374_RS02600 PF01027 Inhibitor of apoptosis-promoting Bax1 AM374_RS02615 PF00805 Pentapeptide repeats (8 copies) AM374_RS02630 PF07824 Type III secretion chaperone domain AM374_RS02635 PF05925 Enterobacterial virulence protein IpgD AM374_RS02640 PF13132 Domain of unknown function (DUF3950) AM374_RS02650 PF03577 Peptidase family C69 AM374_RS02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS02655 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS02660 PF00072 Response regulator receiver domain AM374_RS02660 PF00486 Transcriptional regulatory protein, C terminal AM374_RS02665 PF00576 HIUase/Transthyretin family AM374_RS02680 PF01613 Flavin reductase like domain AM374_RS02685 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AM374_RS02685 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AM374_RS02690 PF01047 MarR family AM374_RS02695 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM374_RS02700 PF00171 Aldehyde dehydrogenase family AM374_RS02705 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM374_RS02710 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AM374_RS02720 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM374_RS02725 PF03328 HpcH/HpaI aldolase/citrate lyase family AM374_RS02730 PF07690 Major Facilitator Superfamily AM374_RS02740 PF12706 Beta-lactamase superfamily domain AM374_RS02760 PF01556 DnaJ C terminal domain AM374_RS02760 PF00226 DnaJ domain AM374_RS02775 PF13098 Thioredoxin-like domain AM374_RS02775 PF02683 Cytochrome C biogenesis protein transmembrane region AM374_RS02775 PF11412 Disulphide bond corrector protein DsbC AM374_RS02780 PF13462 Thioredoxin AM374_RS02780 PF06965 Na+/H+ antiporter 1 AM374_RS02785 PF00578 AhpC/TSA family AM374_RS02790 PF00328 Histidine phosphatase superfamily (branch 2) AM374_RS02795 PF13993 YccJ-like protein AM374_RS02800 PF03358 NADPH-dependent FMN reductase AM374_RS02805 PF10685 Stress-induced bacterial acidophilic repeat motif AM374_RS02810 PF08362 YcdC-like protein, C-terminal region AM374_RS02810 PF00440 Bacterial regulatory proteins, tetR family AM374_RS02820 PF01619 Proline dehydrogenase AM374_RS02820 PF00171 Aldehyde dehydrogenase family AM374_RS02820 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM374_RS02820 PF14850 DNA-binding domain of Proline dehydrogenase AM374_RS02830 PF00474 Sodium:solute symporter family AM374_RS02840 PF02562 PhoH-like protein AM374_RS02875 PF00313 'Cold-shock' DNA-binding domain AM374_RS02885 PF00267 Gram-negative porin AM374_RS02895 PF01966 HD domain AM374_RS02900 PF18284 DNA methylase N-terminal domain AM374_RS02900 PF00145 C-5 cytosine-specific DNA methylase AM374_RS02905 PF03852 DNA mismatch endonuclease Vsr AM374_RS02910 PF00892 EamA-like transporter family AM374_RS02915 PF05661 Protein of unknown function (DUF808) AM374_RS02920 PF09926 Uncharacterized small protein (DUF2158) AM374_RS02925 PF17151 Periplasmic sensor domain AM374_RS02925 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS02935 PF10733 Protein of unknown function (DUF2525) AM374_RS02940 PF10781 Dextransucrase DSRB AM374_RS02945 PF00196 Bacterial regulatory proteins, luxR family AM374_RS02950 PF01311 Bacterial export proteins, family 1 AM374_RS02955 PF01313 Bacterial export proteins, family 3 AM374_RS02960 PF00813 FliP family AM374_RS02965 PF04347 Flagellar biosynthesis protein, FliO AM374_RS02970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM374_RS02970 PF16973 Flagellar motor switch protein FliN N-terminal AM374_RS02975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM374_RS02975 PF02154 Flagellar motor switch protein FliM AM374_RS02980 PF03748 Flagellar basal body-associated protein FliL AM374_RS02985 PF02120 Flagellar hook-length control protein FliK AM374_RS02990 PF02050 Flagellar FliJ protein AM374_RS02995 PF18269 T3SS EscN ATPase C-terminal domain AM374_RS02995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM374_RS03000 PF02108 Flagellar assembly protein FliH AM374_RS03005 PF14842 FliG N-terminal domain AM374_RS03005 PF01706 FliG C-terminal domain AM374_RS03005 PF14841 FliG middle domain AM374_RS03010 PF01514 Secretory protein of YscJ/FliF family AM374_RS03010 PF08345 Flagellar M-ring protein C-terminal AM374_RS03015 PF02049 Flagellar hook-basal body complex protein FliE AM374_RS03025 PF01206 Sulfurtransferase TusA AM374_RS03030 PF04143 Sulphur transport AM374_RS03035 PF13987 YedD-like protein AM374_RS03040 PF00128 Alpha amylase, catalytic domain AM374_RS03040 PF02806 Alpha amylase, C-terminal all-beta domain AM374_RS03045 PF05400 Flagellar protein FliT AM374_RS03050 PF02561 Flagellar protein FliS AM374_RS03055 PF07195 Flagellar hook-associated protein 2 C-terminus AM374_RS03055 PF07196 Flagellin hook IN motif AM374_RS03055 PF02465 Flagellar hook-associated protein 2 N-terminus AM374_RS03065 PF00669 Bacterial flagellin N-terminal helical region AM374_RS03065 PF00700 Bacterial flagellin C-terminal helical region AM374_RS03075 PF04542 Sigma-70 region 2 AM374_RS03075 PF04539 Sigma-70 region 3 AM374_RS03075 PF04545 Sigma-70, region 4 AM374_RS03080 PF02899 Phage integrase, N-terminal SAM-like domain AM374_RS03085 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM374_RS03090 PF00291 Pyridoxal-phosphate dependent enzyme AM374_RS03095 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS03100 PF00005 ABC transporter AM374_RS03105 PF00196 Bacterial regulatory proteins, luxR family AM374_RS03105 PF03472 Autoinducer binding domain AM374_RS03110 PF10769 Protein of unknown function (DUF2594) AM374_RS03120 PF00072 Response regulator receiver domain AM374_RS03120 PF00196 Bacterial regulatory proteins, luxR family AM374_RS03125 PF01541 GIY-YIG catalytic domain AM374_RS03125 PF02151 UvrB/uvrC motif AM374_RS03125 PF08459 UvrC Helix-hairpin-helix N-terminal AM374_RS03130 PF01066 CDP-alcohol phosphatidyltransferase AM374_RS03165 PF02810 SEC-C motif AM374_RS03165 PF03695 Uncharacterised protein family (UPF0149) AM374_RS03170 PF03222 Tryptophan/tyrosine permease family AM374_RS03175 PF10678 Protein of unknown function (DUF2492) AM374_RS03180 PF00210 Ferritin-like domain AM374_RS03185 PF13992 YecR-like lipoprotein AM374_RS03195 PF00210 Ferritin-like domain AM374_RS03205 PF02653 Branched-chain amino acid transport system / permease component AM374_RS03210 PF02358 Trehalose-phosphatase AM374_RS03215 PF00982 Glycosyltransferase family 20 AM374_RS03220 PF00582 Universal stress protein family AM374_RS03230 PF05247 Flagellar transcriptional activator (FlhD) AM374_RS03235 PF05280 Flagellar transcriptional activator (FlhC) AM374_RS03240 PF01618 MotA/TolQ/ExbB proton channel family AM374_RS03245 PF00691 OmpA family AM374_RS03245 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM374_RS03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS03250 PF01584 CheW-like domain AM374_RS03250 PF01627 Hpt domain AM374_RS03250 PF09078 CheY binding AM374_RS03250 PF02895 Signal transducing histidine kinase, homodimeric domain AM374_RS03255 PF01584 CheW-like domain AM374_RS03260 PF00672 HAMP domain AM374_RS03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM374_RS03260 PF02203 Tar ligand binding domain homologue AM374_RS03265 PF01739 CheR methyltransferase, SAM binding domain AM374_RS03265 PF03705 CheR methyltransferase, all-alpha domain AM374_RS03270 PF00072 Response regulator receiver domain AM374_RS03270 PF01339 CheB methylesterase AM374_RS03275 PF00072 Response regulator receiver domain AM374_RS03280 PF04344 Chemotaxis phosphatase, CheZ AM374_RS03285 PF01312 FlhB HrpN YscU SpaS Family AM374_RS03290 PF00771 FHIPEP family AM374_RS03295 PF06366 Flagellar protein FlhE AM374_RS03300 PF07470 Glycosyl Hydrolase Family 88 AM374_RS03305 PF03717 Penicillin-binding Protein dimerisation domain AM374_RS03305 PF00905 Penicillin binding protein transpeptidase domain AM374_RS03310 PF03485 Arginyl tRNA synthetase N terminal domain AM374_RS03310 PF05746 DALR anticodon binding domain AM374_RS03310 PF00750 tRNA synthetases class I (R) AM374_RS03315 PF06185 YecM protein AM374_RS03320 PF03932 CutC family AM374_RS03330 PF08003 Protein of unknown function (DUF1698) AM374_RS03335 PF13649 Methyltransferase domain AM374_RS03340 PF01124 MAPEG family AM374_RS03345 PF01904 Protein of unknown function DUF72 AM374_RS03350 PF00857 Isochorismatase family AM374_RS03355 PF01336 OB-fold nucleic acid binding domain AM374_RS03355 PF02938 GAD domain AM374_RS03355 PF00152 tRNA synthetases class II (D, K and N) AM374_RS03360 PF00293 NUDIX domain AM374_RS03365 PF01709 Transcriptional regulator AM374_RS03370 PF02075 Crossover junction endodeoxyribonuclease RuvC AM374_RS03375 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM374_RS03385 PF01330 RuvA N terminal domain AM374_RS03385 PF07499 RuvA, C-terminal domain AM374_RS03390 PF05491 RuvB C-terminal winged helix domain AM374_RS03390 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM374_RS03390 PF17864 RuvB AAA lid domain AM374_RS03395 PF00950 ABC 3 transport family AM374_RS03400 PF00005 ABC transporter AM374_RS03405 PF01297 Zinc-uptake complex component A periplasmic AM374_RS03410 PF08525 Opacity-associated protein A N-terminal motif AM374_RS03410 PF01476 LysM domain AM374_RS03410 PF01551 Peptidase family M23 AM374_RS03420 PF03279 Bacterial lipid A biosynthesis acyltransferase AM374_RS03425 PF02887 Pyruvate kinase, alpha/beta domain AM374_RS03425 PF00224 Pyruvate kinase, barrel domain AM374_RS03430 PF01380 SIS domain AM374_RS03430 PF01418 Helix-turn-helix domain, rpiR family AM374_RS03440 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM374_RS03440 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM374_RS03445 PF00920 Dehydratase family AM374_RS03450 PF01081 KDPG and KHG aldolase AM374_RS03455 PF02222 ATP-grasp domain AM374_RS03460 PF07130 YebG protein AM374_RS03465 PF13995 YebF-like protein AM374_RS03470 PF04391 Protein of unknown function (DUF533) AM374_RS03475 PF00326 Prolyl oligopeptidase family AM374_RS03475 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM374_RS03480 PF00929 Exonuclease AM374_RS03485 PF00795 Carbon-nitrogen hydrolase AM374_RS03490 PF06440 DNA polymerase III, theta subunit AM374_RS03495 PF04234 CopC domain AM374_RS03500 PF05425 Copper resistance protein D AM374_RS03505 PF10709 Protein of unknown function (DUF2511) AM374_RS03525 PF12468 Type III secretion system leucine rich repeat protein AM374_RS03525 PF14496 C-terminal novel E3 ligase, LRR-interacting AM374_RS03540 PF03129 Anticodon binding domain AM374_RS03540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM374_RS03540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM374_RS03540 PF02824 TGS domain AM374_RS03550 PF00583 Acetyltransferase (GNAT) family AM374_RS03555 PF00534 Glycosyl transferases group 1 AM374_RS03560 PF01381 Helix-turn-helix AM374_RS03565 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AM374_RS03595 PF07166 Protein of unknown function (DUF1398) AM374_RS03600 PF05364 Salmonella type III secretion SopE effector N-terminus AM374_RS03600 PF07487 SopE GEF domain AM374_RS03615 PF00149 Calcineurin-like phosphoesterase AM374_RS03620 PF07358 Protein of unknown function (DUF1482) AM374_RS03625 PF07351 Protein of unknown function (DUF1480) AM374_RS03630 PF01189 16S rRNA methyltransferase RsmB/F AM374_RS03630 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AM374_RS03630 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AM374_RS03635 PF02470 MlaD protein AM374_RS03640 PF04403 Paraquat-inducible protein A AM374_RS03645 PF13185 GAF domain AM374_RS03650 PF04352 ProQ/FINO family AM374_RS03650 PF17516 ProQ C-terminal domain AM374_RS03655 PF00595 PDZ domain AM374_RS03655 PF17804 Tail specific protease N-terminal domain AM374_RS03655 PF03572 Peptidase family S41 AM374_RS03655 PF11818 C-terminal domain of tail specific protease (DUF3340) AM374_RS03660 PF01435 Peptidase family M48 AM374_RS03665 PF07690 Major Facilitator Superfamily AM374_RS03670 PF01614 Bacterial transcriptional regulator AM374_RS03670 PF09339 IclR helix-turn-helix domain AM374_RS03675 PF13996 YobH-like protein AM374_RS03680 PF13998 MgrB protein AM374_RS03685 PF13974 YebO-like protein AM374_RS03690 PF10736 Protein of unknown function (DUF2627) AM374_RS03695 PF00313 'Cold-shock' DNA-binding domain AM374_RS03700 PF00905 Penicillin binding protein transpeptidase domain AM374_RS03700 PF03717 Penicillin-binding Protein dimerisation domain AM374_RS03705 PF13847 Methyltransferase domain AM374_RS03710 PF02659 Putative manganese efflux pump AM374_RS03720 PF06173 Protein of unknown function (DUF986) AM374_RS03725 PF03613 PTS system mannose/fructose/sorbose family IID component AM374_RS03730 PF03609 PTS system sorbose-specific iic component AM374_RS03735 PF03610 PTS system fructose IIA component AM374_RS03735 PF03830 PTS system sorbose subfamily IIB component AM374_RS03745 PF03741 Integral membrane protein TerC family AM374_RS03745 PF03471 Transporter associated domain AM374_RS03750 PF00563 EAL domain AM374_RS03750 PF12792 CSS motif domain associated with EAL AM374_RS03755 PF03315 Serine dehydratase beta chain AM374_RS03755 PF03313 Serine dehydratase alpha chain AM374_RS03760 PF00293 NUDIX domain AM374_RS03765 PF04715 Anthranilate synthase component I, N terminal region AM374_RS03765 PF00425 chorismate binding enzyme AM374_RS03770 PF03701 Uncharacterised protein family (UPF0181) AM374_RS03775 PF01042 Endoribonuclease L-PSP AM374_RS03780 PF04851 Type III restriction enzyme, res subunit AM374_RS03780 PF13307 Helicase C-terminal domain AM374_RS03785 PF00814 Glycoprotease family AM374_RS03790 PF03843 Outer membrane lipoprotein Slp family AM374_RS03800 PF00501 AMP-binding enzyme AM374_RS03800 PF13193 AMP-binding enzyme C-terminal domain AM374_RS03805 PF01612 3'-5' exonuclease AM374_RS03805 PF00570 HRDC domain AM374_RS03810 PF03776 Septum formation topological specificity factor MinE AM374_RS03815 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM374_RS03820 PF03775 Septum formation inhibitor MinC, C-terminal domain AM374_RS03820 PF05209 Septum formation inhibitor MinC, N-terminal domain AM374_RS03825 PF05166 YcgL domain AM374_RS03830 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM374_RS03835 PF03692 Putative zinc- or iron-chelating domain AM374_RS03845 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system AM374_RS03855 PF02600 Disulfide bond formation protein DsbB AM374_RS03860 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AM374_RS03865 PF07840 FadR C-terminal domain AM374_RS03865 PF00392 Bacterial regulatory proteins, gntR family AM374_RS03870 PF04293 SpoVR like protein AM374_RS03875 PF01266 FAD dependent oxidoreductase AM374_RS03880 PF01168 Alanine racemase, N-terminal domain AM374_RS03880 PF00842 Alanine racemase, C-terminal domain AM374_RS03885 PF02080 TrkA-C domain AM374_RS03885 PF00999 Sodium/hydrogen exchanger family AM374_RS03885 PF03471 Transporter associated domain AM374_RS03890 PF17676 LD-carboxypeptidase C-terminal domain AM374_RS03890 PF02016 LD-carboxypeptidase N-terminal domain AM374_RS03895 PF01464 Transglycosylase SLT domain AM374_RS03900 PF07238 PilZ domain AM374_RS03900 PF07317 Flagellar regulator YcgR AM374_RS03905 PF04226 Transglycosylase associated protein AM374_RS03910 PF01204 Trehalase AM374_RS03915 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM374_RS03915 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM374_RS03920 PF08173 Membrane bound YbgT-like protein AM374_RS03925 PF02322 Cytochrome bd terminal oxidase subunit II AM374_RS03930 PF01654 Cytochrome bd terminal oxidase subunit I AM374_RS03935 PF04809 HupH hydrogenase expression protein, C-terminal conserved region AM374_RS03940 PF07449 Hydrogenase-1 expression protein HyaE AM374_RS03945 PF01750 Hydrogenase maturation protease AM374_RS03950 PF01292 Prokaryotic cytochrome b561 AM374_RS03955 PF00374 Nickel-dependent hydrogenase AM374_RS03960 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM374_RS03960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM374_RS03980 PF01926 50S ribosome-binding GTPase AM374_RS03980 PF06071 Protein of unknown function (DUF933) AM374_RS03985 PF01195 Peptidyl-tRNA hydrolase AM374_RS03990 PF10762 Protein of unknown function (DUF2583) AM374_RS03995 PF00916 Sulfate permease family AM374_RS03995 PF01740 STAS domain AM374_RS04000 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM374_RS04000 PF14572 Phosphoribosyl synthetase-associated domain AM374_RS04005 PF08544 GHMP kinases C terminal AM374_RS04005 PF00288 GHMP kinases N terminal domain AM374_RS04010 PF03550 Outer membrane lipoprotein LolB AM374_RS04015 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM374_RS04015 PF01488 Shikimate / quinate 5-dehydrogenase AM374_RS04015 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM374_RS04020 PF00472 RF-1 domain AM374_RS04020 PF03462 PCRF domain AM374_RS04025 PF13847 Methyltransferase domain AM374_RS04025 PF17827 PrmC N-terminal domain AM374_RS04030 PF04247 Invasion gene expression up-regulator, SirB AM374_RS04035 PF13369 Transglutaminase-like superfamily AM374_RS04040 PF00793 DAHP synthetase I family AM374_RS04045 PF01699 Sodium/calcium exchanger protein AM374_RS04050 PF06150 ChaB AM374_RS04055 PF02635 DsrE/DsrF-like family AM374_RS04060 PF11924 Inverse autotransporter, beta-domain AM374_RS04065 PF00072 Response regulator receiver domain AM374_RS04065 PF00196 Bacterial regulatory proteins, luxR family AM374_RS04070 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM374_RS04070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS04070 PF07730 Histidine kinase AM374_RS04070 PF00672 HAMP domain AM374_RS04080 PF07690 Major Facilitator Superfamily AM374_RS04085 PF00384 Molybdopterin oxidoreductase AM374_RS04085 PF01568 Molydopterin dinucleotide binding domain AM374_RS04085 PF14710 Respiratory nitrate reductase alpha N-terminal AM374_RS04090 PF14711 Respiratory nitrate reductase beta C-terminal AM374_RS04090 PF13247 4Fe-4S dicluster domain AM374_RS04095 PF02613 Nitrate reductase delta subunit AM374_RS04100 PF02665 Nitrate reductase gamma subunit AM374_RS04145 PF01842 ACT domain AM374_RS04145 PF00551 Formyl transferase AM374_RS04150 PF02810 SEC-C motif AM374_RS04155 PF01734 Patatin-like phospholipase AM374_RS04160 PF00072 Response regulator receiver domain AM374_RS04165 PF00483 Nucleotidyl transferase AM374_RS04170 PF00816 H-NS histone family AM374_RS04175 PF00265 Thymidine kinase AM374_RS04180 PF00171 Aldehyde dehydrogenase family AM374_RS04180 PF00465 Iron-containing alcohol dehydrogenase AM374_RS04185 PF01914 MarC family integral membrane protein AM374_RS04195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM374_RS04200 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS04205 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS04205 PF12911 N-terminal TM domain of oligopeptide transport permease C AM374_RS04210 PF00005 ABC transporter AM374_RS04210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM374_RS04215 PF00005 ABC transporter AM374_RS04215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM374_RS04220 PF00520 Ion transport protein AM374_RS04220 PF00027 Cyclic nucleotide-binding domain AM374_RS04225 PF04269 Protein of unknown function, DUF440 AM374_RS04230 PF13396 Phospholipase_D-nuclease N-terminal AM374_RS04230 PF13091 PLD-like domain AM374_RS04235 PF03795 YCII-related domain AM374_RS04240 PF03544 Gram-negative bacterial TonB protein C-terminal AM374_RS04245 PF03061 Thioesterase superfamily AM374_RS04250 PF04279 Intracellular septation protein A AM374_RS04260 PF03692 Putative zinc- or iron-chelating domain AM374_RS04265 PF03922 OmpW family AM374_RS04270 PF05067 Manganese containing catalase AM374_RS04275 PF05974 Domain of unknown function (DUF892) AM374_RS04280 PF05974 Domain of unknown function (DUF892) AM374_RS04285 PF10685 Stress-induced bacterial acidophilic repeat motif AM374_RS04290 PF00290 Tryptophan synthase alpha chain AM374_RS04295 PF00291 Pyridoxal-phosphate dependent enzyme AM374_RS04300 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM374_RS04300 PF00218 Indole-3-glycerol phosphate synthase AM374_RS04305 PF00117 Glutamine amidotransferase class-I AM374_RS04305 PF00591 Glycosyl transferase family, a/b domain AM374_RS04305 PF02885 Glycosyl transferase family, helical bundle domain AM374_RS04310 PF00425 chorismate binding enzyme AM374_RS04310 PF04715 Anthranilate synthase component I, N terminal region AM374_RS04315 PF08255 Trp-operon Leader Peptide AM374_RS04320 PF02811 PHP domain AM374_RS04325 PF01300 Telomere recombination AM374_RS04330 PF00849 RNA pseudouridylate synthase AM374_RS04330 PF01479 S4 domain AM374_RS04335 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM374_RS04340 PF00106 short chain dehydrogenase AM374_RS04345 PF08496 Peptidase family S49 N-terminal AM374_RS04345 PF01343 Peptidase family S49 AM374_RS04350 PF10692 Protein of unknown function (DUF2498) AM374_RS04360 PF08272 Topoisomerase I zinc-ribbon-like AM374_RS04360 PF01131 DNA topoisomerase AM374_RS04360 PF01396 Topoisomerase DNA binding C4 zinc finger AM374_RS04360 PF01751 Toprim domain AM374_RS04365 PF03466 LysR substrate binding domain AM374_RS04365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS04380 PF00330 Aconitase family (aconitate hydratase) AM374_RS04380 PF00694 Aconitase C-terminal domain AM374_RS04385 PF00925 GTP cyclohydrolase II AM374_RS04390 PF01569 PAP2 superfamily AM374_RS04400 PF06305 Lipopolysaccharide assembly protein A domain AM374_RS04405 PF18073 Rubredoxin metal binding domain AM374_RS04410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM374_RS04415 PF01253 Translation initiation factor SUI1 AM374_RS04420 PF05433 Glycine zipper 2TM domain AM374_RS04425 PF00455 DeoR C terminal sensor domain AM374_RS04425 PF08220 DeoR-like helix-turn-helix domain AM374_RS04435 PF13426 PAS domain AM374_RS04435 PF00563 EAL domain AM374_RS04435 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS04445 PF00575 S1 RNA binding domain AM374_RS04445 PF00773 RNB domain AM374_RS04445 PF08206 Ribonuclease B OB domain AM374_RS04445 PF17876 Cold shock domain AM374_RS04480 PF00005 ABC transporter AM374_RS04485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM374_RS04485 PF00005 ABC transporter AM374_RS04490 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS04490 PF12911 N-terminal TM domain of oligopeptide transport permease C AM374_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS04500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM374_RS04505 PF00158 Sigma-54 interaction domain AM374_RS04505 PF02954 Bacterial regulatory protein, Fis family AM374_RS04510 PF04012 PspA/IM30 family AM374_RS04515 PF06667 Phage shock protein B AM374_RS04520 PF04024 PspC domain AM374_RS04525 PF09584 Phage shock protein PspD (Phageshock_PspD) AM374_RS04530 PF00581 Rhodanese-like domain AM374_RS04535 PF04317 YcjX-like family, DUF463 AM374_RS04540 PF05128 Domain of unknown function (DUF697) AM374_RS04545 PF18024 Helix-turn-helix domain AM374_RS04545 PF00158 Sigma-54 interaction domain AM374_RS04550 PF08534 Redoxin AM374_RS04555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM374_RS04555 PF13378 Enolase C-terminal domain-like AM374_RS04560 PF00246 Zinc carboxypeptidase AM374_RS04565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM374_RS04570 PF02627 Carboxymuconolactone decarboxylase family AM374_RS04580 PF02613 Nitrate reductase delta subunit AM374_RS04585 PF04976 DMSO reductase anchor subunit (DmsC) AM374_RS04590 PF12800 4Fe-4S binding domain AM374_RS04590 PF13247 4Fe-4S dicluster domain AM374_RS04595 PF01568 Molydopterin dinucleotide binding domain AM374_RS04595 PF00384 Molybdopterin oxidoreductase AM374_RS04595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS04600 PF03466 LysR substrate binding domain AM374_RS04610 PF13378 Enolase C-terminal domain-like AM374_RS04610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM374_RS04615 PF03222 Tryptophan/tyrosine permease family AM374_RS04625 PF07690 Major Facilitator Superfamily AM374_RS04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS04635 PF03466 LysR substrate binding domain AM374_RS04640 PF00248 Aldo/keto reductase family AM374_RS04650 PF00440 Bacterial regulatory proteins, tetR family AM374_RS04665 PF12833 Helix-turn-helix domain AM374_RS04665 PF06445 GyrI-like small molecule binding domain AM374_RS04690 PF08534 Redoxin AM374_RS04710 PF00924 Mechanosensitive ion channel AM374_RS04715 PF10749 Protein of unknown function (DUF2534) AM374_RS04720 PF00582 Universal stress protein family AM374_RS04725 PF00027 Cyclic nucleotide-binding domain AM374_RS04725 PF13545 Crp-like helix-turn-helix domain AM374_RS04730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM374_RS04730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM374_RS04735 PF01713 Smr domain AM374_RS04745 PF02203 Tar ligand binding domain homologue AM374_RS04745 PF00672 HAMP domain AM374_RS04745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM374_RS04750 PF01544 CorA-like Mg2+ transporter protein AM374_RS04760 PF00271 Helicase conserved C-terminal domain AM374_RS04760 PF00270 DEAD/DEAH box helicase AM374_RS04760 PF03880 DbpA RNA binding domain AM374_RS04765 PF01171 PP-loop family AM374_RS04770 PF12167 Arm DNA-binding domain AM374_RS04770 PF00589 Phage integrase family AM374_RS04785 PF00893 Small Multidrug Resistance protein AM374_RS04790 PF00582 Universal stress protein family AM374_RS04795 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AM374_RS04795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM374_RS04795 PF10371 Domain of unknown function AM374_RS04795 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AM374_RS04795 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AM374_RS04805 PF03891 Domain of unknown function (DUF333) AM374_RS04810 PF03724 META domain AM374_RS04815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM374_RS04815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM374_RS04820 PF11739 Dicarboxylate transport AM374_RS04825 PF13617 YnbE-like lipoprotein AM374_RS04830 PF07027 Protein of unknown function (DUF1318) AM374_RS04840 PF02525 Flavodoxin-like fold AM374_RS04845 PF00271 Helicase conserved C-terminal domain AM374_RS04845 PF04408 Helicase associated domain (HA2) AM374_RS04845 PF00270 DEAD/DEAH box helicase AM374_RS04845 PF11898 Domain of unknown function (DUF3418) AM374_RS04845 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM374_RS04850 PF02698 DUF218 domain AM374_RS04855 PF01292 Prokaryotic cytochrome b561 AM374_RS04860 PF08242 Methyltransferase domain AM374_RS04870 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS04875 PF00005 ABC transporter AM374_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS04885 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM374_RS04895 PF06767 Sif protein AM374_RS04895 PF00657 GDSL-like Lipase/Acylhydrolase AM374_RS04910 PF02583 Metal-sensitive transcriptional repressor AM374_RS04915 PF00107 Zinc-binding dehydrogenase AM374_RS04915 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS04925 PF02203 Tar ligand binding domain homologue AM374_RS04925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM374_RS04925 PF00672 HAMP domain AM374_RS04930 PF03466 LysR substrate binding domain AM374_RS04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS04935 PF07063 Domain of unknown function (DUF1338) AM374_RS04940 PF00135 Carboxylesterase family AM374_RS04945 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM374_RS04950 PF04264 YceI-like domain AM374_RS04955 PF01070 FMN-dependent dehydrogenase AM374_RS04960 PF00583 Acetyltransferase (GNAT) family AM374_RS04965 PF08220 DeoR-like helix-turn-helix domain AM374_RS04965 PF00455 DeoR C terminal sensor domain AM374_RS04970 PF00834 Ribulose-phosphate 3 epimerase family AM374_RS04975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM374_RS04980 PF03437 BtpA family AM374_RS04985 PF03611 PTS system sugar-specific permease component AM374_RS04990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM374_RS04995 PF05343 M42 glutamyl aminopeptidase AM374_RS05000 PF13302 Acetyltransferase (GNAT) domain AM374_RS05005 PF18836 Beta solenoid repeat from YDCK AM374_RS05010 PF03595 Voltage-dependent anion channel AM374_RS05015 PF03848 Tellurite resistance protein TehB AM374_RS05020 PF11769 Protein of unknown function (DUF3313) AM374_RS05025 PF03594 Benzoate membrane transport protein AM374_RS05030 PF01381 Helix-turn-helix AM374_RS05030 PF07883 Cupin domain AM374_RS05035 PF01136 Peptidase family U32 AM374_RS05035 PF12392 Collagenase AM374_RS05040 PF10829 Protein of unknown function (DUF2554) AM374_RS05045 PF06767 Sif protein AM374_RS05060 PF01427 D-ala-D-ala dipeptidase AM374_RS05065 PF00392 Bacterial regulatory proteins, gntR family AM374_RS05065 PF00155 Aminotransferase class I and II AM374_RS05070 PF00171 Aldehyde dehydrogenase family AM374_RS05080 PF10753 Toxin GhoT_OrtT AM374_RS05100 PF10735 Protein of unknown function (DUF2526) AM374_RS05105 PF04657 Putative inner membrane exporter, YdcZ AM374_RS05115 PF00107 Zinc-binding dehydrogenase AM374_RS05115 PF16884 N-terminal domain of oxidoreductase AM374_RS05120 PF07729 FCD domain AM374_RS05120 PF00392 Bacterial regulatory proteins, gntR family AM374_RS05125 PF07715 TonB-dependent Receptor Plug Domain AM374_RS05125 PF00593 TonB dependent receptor AM374_RS05135 PF06004 Bacterial protein of unknown function (DUF903) AM374_RS05140 PF00324 Amino acid permease AM374_RS05155 PF00797 N-acetyltransferase AM374_RS05160 PF02567 Phenazine biosynthesis-like protein AM374_RS05165 PF02665 Nitrate reductase gamma subunit AM374_RS05170 PF02613 Nitrate reductase delta subunit AM374_RS05175 PF14711 Respiratory nitrate reductase beta C-terminal AM374_RS05175 PF13247 4Fe-4S dicluster domain AM374_RS05180 PF14710 Respiratory nitrate reductase alpha N-terminal AM374_RS05180 PF01568 Molydopterin dinucleotide binding domain AM374_RS05180 PF00384 Molybdopterin oxidoreductase AM374_RS05185 PF07690 Major Facilitator Superfamily AM374_RS05190 PF00440 Bacterial regulatory proteins, tetR family AM374_RS05195 PF07690 Major Facilitator Superfamily AM374_RS05205 PF00267 Gram-negative porin AM374_RS05210 PF00892 EamA-like transporter family AM374_RS05215 PF01568 Molydopterin dinucleotide binding domain AM374_RS05215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS05215 PF00384 Molybdopterin oxidoreductase AM374_RS05220 PF01568 Molydopterin dinucleotide binding domain AM374_RS05220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS05220 PF00384 Molybdopterin oxidoreductase AM374_RS05225 PF12800 4Fe-4S binding domain AM374_RS05225 PF09163 Formate dehydrogenase N, transmembrane AM374_RS05225 PF13247 4Fe-4S dicluster domain AM374_RS05230 PF01292 Prokaryotic cytochrome b561 AM374_RS05235 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS05235 PF00107 Zinc-binding dehydrogenase AM374_RS05240 PF03949 Malic enzyme, NAD binding domain AM374_RS05240 PF00390 Malic enzyme, N-terminal domain AM374_RS05245 PF08136 30S ribosomal protein subunit S22 family AM374_RS05250 PF10684 Putative biofilm-dependent modulation protein AM374_RS05255 PF02566 OsmC-like protein AM374_RS05260 PF06411 HdeA/HdeB family AM374_RS05270 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM374_RS05270 PF11941 Domain of unknown function (DUF3459) AM374_RS05270 PF00128 Alpha amylase, catalytic domain AM374_RS05275 PF00128 Alpha amylase, catalytic domain AM374_RS05280 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM374_RS05280 PF00128 Alpha amylase, catalytic domain AM374_RS05285 PF00155 Aminotransferase class I and II AM374_RS05290 PF03553 Na+/H+ antiporter family AM374_RS05295 PF00356 Bacterial regulatory proteins, lacI family AM374_RS05305 PF03060 Nitronate monooxygenase AM374_RS05310 PF03466 LysR substrate binding domain AM374_RS05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS05345 PF05707 Zonular occludens toxin (Zot) AM374_RS05420 PF05707 Zonular occludens toxin (Zot) AM374_RS05515 PF01042 Endoribonuclease L-PSP AM374_RS05520 PF02547 Queuosine biosynthesis protein AM374_RS05530 PF01494 FAD binding domain AM374_RS05535 PF07690 Major Facilitator Superfamily AM374_RS05545 PF07690 Major Facilitator Superfamily AM374_RS05550 PF00107 Zinc-binding dehydrogenase AM374_RS05550 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS05555 PF07729 FCD domain AM374_RS05555 PF00392 Bacterial regulatory proteins, gntR family AM374_RS05565 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM374_RS05565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM374_RS05570 PF00374 Nickel-dependent hydrogenase AM374_RS05575 PF01292 Prokaryotic cytochrome b561 AM374_RS05580 PF01750 Hydrogenase maturation protease AM374_RS05585 PF01455 HupF/HypC family AM374_RS05595 PF04809 HupH hydrogenase expression protein, C-terminal conserved region AM374_RS05605 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM374_RS05610 PF00267 Gram-negative porin AM374_RS05620 PF01062 Bestrophin, RFP-TM, chloride channel AM374_RS05625 PF13811 Domain of unknown function (DUF4186) AM374_RS05630 PF04960 Glutaminase AM374_RS05635 PF00171 Aldehyde dehydrogenase family AM374_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS05640 PF03466 LysR substrate binding domain AM374_RS05645 PF07690 Major Facilitator Superfamily AM374_RS05650 PF01914 MarC family integral membrane protein AM374_RS05655 PF01047 MarR family AM374_RS05660 PF12833 Helix-turn-helix domain AM374_RS05665 PF13999 MarB protein AM374_RS05670 PF00892 EamA-like transporter family AM374_RS05675 PF07690 Major Facilitator Superfamily AM374_RS05690 PF04076 Bacterial OB fold (BOF) protein AM374_RS05695 PF02464 Competence-damaged protein AM374_RS05700 PF10685 Stress-induced bacterial acidophilic repeat motif AM374_RS05710 PF01432 Peptidase family M3 AM374_RS05715 PF00106 short chain dehydrogenase AM374_RS05720 PF07729 FCD domain AM374_RS05720 PF00392 Bacterial regulatory proteins, gntR family AM374_RS05725 PF14001 YdfZ protein AM374_RS05730 PF08125 Mannitol dehydrogenase C-terminal domain AM374_RS05730 PF01232 Mannitol dehydrogenase Rossmann domain AM374_RS05735 PF00083 Sugar (and other) transporter AM374_RS05735 PF07690 Major Facilitator Superfamily AM374_RS05740 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS05740 PF00107 Zinc-binding dehydrogenase AM374_RS05745 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM374_RS05745 PF13378 Enolase C-terminal domain-like AM374_RS05750 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM374_RS05755 PF06932 Protein of unknown function (DUF1283) AM374_RS05760 PF13302 Acetyltransferase (GNAT) domain AM374_RS05765 PF06788 Uncharacterised protein family (UPF0257) AM374_RS05770 PF06649 Protein of unknown function (DUF1161) AM374_RS05775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS05775 PF00384 Molybdopterin oxidoreductase AM374_RS05775 PF01568 Molydopterin dinucleotide binding domain AM374_RS05780 PF01568 Molydopterin dinucleotide binding domain AM374_RS05780 PF00384 Molybdopterin oxidoreductase AM374_RS05780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS05785 PF13247 4Fe-4S dicluster domain AM374_RS05785 PF12800 4Fe-4S binding domain AM374_RS05790 PF04976 DMSO reductase anchor subunit (DmsC) AM374_RS05795 PF02613 Nitrate reductase delta subunit AM374_RS05800 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS05805 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM374_RS05810 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS05815 PF00571 CBS domain AM374_RS05815 PF00005 ABC transporter AM374_RS05820 PF00654 Voltage gated chloride channel AM374_RS05830 PF00480 ROK family AM374_RS05840 PF03466 LysR substrate binding domain AM374_RS05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS05845 PF07690 Major Facilitator Superfamily AM374_RS05855 PF00089 Trypsin AM374_RS05860 PF00893 Small Multidrug Resistance protein AM374_RS05865 PF00893 Small Multidrug Resistance protein AM374_RS05875 PF01594 AI-2E family transporter AM374_RS05880 PF02233 NAD(P) transhydrogenase beta subunit AM374_RS05885 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM374_RS05885 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM374_RS05885 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM374_RS05890 PF07338 Protein of unknown function (DUF1471) AM374_RS05895 PF13520 Amino acid permease AM374_RS05900 PF06942 GlpM protein AM374_RS05905 PF00072 Response regulator receiver domain AM374_RS05905 PF00486 Transcriptional regulatory protein, C terminal AM374_RS05915 PF00267 Gram-negative porin AM374_RS05920 PF13382 Adenine deaminase C-terminal domain AM374_RS05920 PF01979 Amidohydrolase family AM374_RS05925 PF00672 HAMP domain AM374_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS05925 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS05930 PF05472 DNA replication terminus site-binding protein (Ter protein) AM374_RS05935 PF10415 Fumarase C C-terminus AM374_RS05935 PF00206 Lyase AM374_RS05940 PF05681 Fumarate hydratase (Fumerase) AM374_RS05940 PF05683 Fumarase C-terminus AM374_RS05945 PF01238 Phosphomannose isomerase type I AM374_RS05950 PF06097 Bacterial protein of unknown function (DUF945) AM374_RS05960 PF00155 Aminotransferase class I and II AM374_RS05965 PF00962 Adenosine/AMP deaminase AM374_RS05970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM374_RS05970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM374_RS05980 PF05321 Haemolysin expression modulating protein AM374_RS05985 PF10754 Protein of unknown function (DUF2569) AM374_RS05990 PF02508 Rnf-Nqr subunit, membrane protein AM374_RS05995 PF04060 Putative Fe-S cluster AM374_RS06000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM374_RS06000 PF12838 4Fe-4S dicluster domain AM374_RS06000 PF13375 RnfC Barrel sandwich hybrid domain AM374_RS06000 PF10531 SLBB domain AM374_RS06005 PF03116 NQR2, RnfD, RnfE family AM374_RS06010 PF04205 FMN-binding domain AM374_RS06015 PF02508 Rnf-Nqr subunit, membrane protein AM374_RS06020 PF10576 Iron-sulfur binding domain of endonuclease III AM374_RS06020 PF00730 HhH-GPD superfamily base excision DNA repair protein AM374_RS06020 PF00633 Helix-hairpin-helix motif AM374_RS06025 PF00854 POT family AM374_RS06030 PF02798 Glutathione S-transferase, N-terminal domain AM374_RS06030 PF00043 Glutathione S-transferase, C-terminal domain AM374_RS06035 PF08543 Phosphomethylpyrimidine kinase AM374_RS06040 PF01479 S4 domain AM374_RS06040 PF00579 tRNA synthetases class I (W and Y) AM374_RS06045 PF01243 Pyridoxamine 5'-phosphate oxidase AM374_RS06045 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM374_RS06050 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AM374_RS06055 PF03702 Anhydro-N-acetylmuramic acid kinase AM374_RS06060 PF05433 Glycine zipper 2TM domain AM374_RS06065 PF01047 MarR family AM374_RS06070 PF07869 Protein of unknown function (DUF1656) AM374_RS06075 PF00529 HlyD membrane-fusion protein of T1SS AM374_RS06075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM374_RS06080 PF04632 Fusaric acid resistance protein family AM374_RS06085 PF00080 Copper/zinc superoxide dismutase (SODC) AM374_RS06090 PF00248 Aldo/keto reductase family AM374_RS06095 PF06945 Protein of unknown function (DUF1289) AM374_RS06100 PF16925 Tetracyclin repressor-like, C-terminal domain AM374_RS06100 PF00440 Bacterial regulatory proteins, tetR family AM374_RS06105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM374_RS06110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM374_RS06115 PF00929 Exonuclease AM374_RS06125 PF00462 Glutaredoxin AM374_RS06130 PF00877 NlpC/P60 family AM374_RS06135 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM374_RS06135 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM374_RS06145 PF00356 Bacterial regulatory proteins, lacI family AM374_RS06150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS06150 PF03466 LysR substrate binding domain AM374_RS06155 PF07690 Major Facilitator Superfamily AM374_RS06165 PF00677 Lumazine binding domain AM374_RS06170 PF01554 MatE AM374_RS06185 PF01312 FlhB HrpN YscU SpaS Family AM374_RS06190 PF01311 Bacterial export proteins, family 1 AM374_RS06195 PF01313 Bacterial export proteins, family 3 AM374_RS06200 PF00813 FliP family AM374_RS06205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM374_RS06220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM374_RS06220 PF18269 T3SS EscN ATPase C-terminal domain AM374_RS06225 PF00771 FHIPEP family AM374_RS06235 PF07201 HrpJ-like domain AM374_RS06250 PF01514 Secretory protein of YscJ/FliF family AM374_RS06290 PF05802 Enterobacterial EspB protein AM374_RS06295 PF04888 Secretion system effector C (SseC) like family AM374_RS06305 PF03433 EspA-like secreted protein AM374_RS06335 PF00072 Response regulator receiver domain AM374_RS06335 PF01627 Hpt domain AM374_RS06335 PF00672 HAMP domain AM374_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS06335 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS06335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM374_RS06340 PF00072 Response regulator receiver domain AM374_RS06340 PF00196 Bacterial regulatory proteins, luxR family AM374_RS06345 PF13411 MerR HTH family regulatory protein AM374_RS06350 PF08349 Protein of unknown function (DUF1722) AM374_RS06355 PF10965 Protein of unknown function (DUF2767) AM374_RS06360 PF00072 Response regulator receiver domain AM374_RS06360 PF00196 Bacterial regulatory proteins, luxR family AM374_RS06365 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS06370 PF13247 4Fe-4S dicluster domain AM374_RS06375 PF03916 Polysulphide reductase, NrfD AM374_RS06380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS06380 PF00384 Molybdopterin oxidoreductase AM374_RS06380 PF01568 Molydopterin dinucleotide binding domain AM374_RS06385 PF00294 pfkB family carbohydrate kinase AM374_RS06395 PF00561 alpha/beta hydrolase fold AM374_RS06400 PF00324 Amino acid permease AM374_RS06410 PF02887 Pyruvate kinase, alpha/beta domain AM374_RS06410 PF00224 Pyruvate kinase, barrel domain AM374_RS06415 PF04728 Lipoprotein leucine-zipper AM374_RS06420 PF04728 Lipoprotein leucine-zipper AM374_RS06425 PF03734 L,D-transpeptidase catalytic domain AM374_RS06425 PF17969 L,D-transpeptidase C-terminal domain AM374_RS06425 PF01476 LysM domain AM374_RS06430 PF02657 Fe-S metabolism associated domain AM374_RS06435 PF00266 Aminotransferase class-V AM374_RS06440 PF01458 Uncharacterized protein family (UPF0051) AM374_RS06445 PF00005 ABC transporter AM374_RS06450 PF01458 Uncharacterized protein family (UPF0051) AM374_RS06455 PF01521 Iron-sulphur cluster biosynthesis AM374_RS06460 PF00375 Sodium:dicarboxylate symporter family AM374_RS06465 PF15930 Domain of unknown function AM374_RS06470 PF03061 Thioesterase superfamily AM374_RS06475 PF13183 4Fe-4S dicluster domain AM374_RS06475 PF01565 FAD binding domain AM374_RS06475 PF02913 FAD linked oxidases, C-terminal domain AM374_RS06480 PF01594 AI-2E family transporter AM374_RS06490 PF08965 Domain of unknown function (DUF1870) AM374_RS06495 PF07690 Major Facilitator Superfamily AM374_RS06500 PF07690 Major Facilitator Superfamily AM374_RS06505 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM374_RS06505 PF08501 Shikimate dehydrogenase substrate binding domain AM374_RS06510 PF01487 Type I 3-dehydroquinase AM374_RS06515 PF01144 Coenzyme A transferase AM374_RS06520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM374_RS06520 PF02770 Acyl-CoA dehydrogenase, middle domain AM374_RS06520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM374_RS06525 PF12833 Helix-turn-helix domain AM374_RS06525 PF02311 AraC-like ligand binding domain AM374_RS06530 PF01012 Electron transfer flavoprotein domain AM374_RS06535 PF01012 Electron transfer flavoprotein domain AM374_RS06535 PF00766 Electron transfer flavoprotein FAD-binding domain AM374_RS06540 PF01494 FAD binding domain AM374_RS06550 PF00501 AMP-binding enzyme AM374_RS06550 PF13193 AMP-binding enzyme C-terminal domain AM374_RS06555 PF02896 PEP-utilising enzyme, TIM barrel domain AM374_RS06555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM374_RS06555 PF00391 PEP-utilising enzyme, mobile domain AM374_RS06560 PF03618 Kinase/pyrophosphorylase AM374_RS06565 PF00793 DAHP synthetase I family AM374_RS06570 PF10636 Hemin uptake protein hemP AM374_RS06575 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM374_RS06580 PF00563 EAL domain AM374_RS06585 PF00877 NlpC/P60 family AM374_RS06590 PF00005 ABC transporter AM374_RS06595 PF00255 Glutathione peroxidase AM374_RS06600 PF01032 FecCD transport family AM374_RS06605 PF00216 Bacterial DNA-binding protein AM374_RS06610 PF03147 Ferredoxin-fold anticodon binding domain AM374_RS06610 PF03483 B3/4 domain AM374_RS06610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM374_RS06610 PF01588 Putative tRNA binding domain AM374_RS06610 PF03484 tRNA synthetase B5 domain AM374_RS06615 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM374_RS06615 PF01409 tRNA synthetases class II core domain (F) AM374_RS06625 PF00453 Ribosomal protein L20 AM374_RS06630 PF01632 Ribosomal protein L35 AM374_RS06635 PF05198 Translation initiation factor IF-3, N-terminal domain AM374_RS06635 PF00707 Translation initiation factor IF-3, C-terminal domain AM374_RS06640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM374_RS06640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM374_RS06640 PF02824 TGS domain AM374_RS06640 PF03129 Anticodon binding domain AM374_RS06645 PF01223 DNA/RNA non-specific endonuclease AM374_RS06660 PF04338 Protein of unknown function, DUF481 AM374_RS06665 PF00294 pfkB family carbohydrate kinase AM374_RS06670 PF11080 Endoribonuclease GhoS AM374_RS06675 PF03881 Fructosamine kinase AM374_RS06680 PF14002 YniB-like protein AM374_RS06685 PF13419 Haloacid dehalogenase-like hydrolase AM374_RS06690 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM374_RS06695 PF00375 Sodium:dicarboxylate symporter family AM374_RS06700 PF10729 Cell division activator CedA AM374_RS06705 PF18011 C-terminal domain found in long catalases AM374_RS06705 PF06628 Catalase-related immune-responsive AM374_RS06705 PF00199 Catalase AM374_RS06710 PF04794 YdjC-like protein AM374_RS06715 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM374_RS06715 PF02056 Family 4 glycosyl hydrolase AM374_RS06720 PF07883 Cupin domain AM374_RS06720 PF12833 Helix-turn-helix domain AM374_RS06725 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM374_RS06730 PF02378 Phosphotransferase system, EIIC AM374_RS06735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM374_RS06745 PF04355 SmpA / OmlA family AM374_RS06750 PF02540 NAD synthase AM374_RS06760 PF07813 LTXXQ motif family protein AM374_RS06770 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM374_RS06775 PF04996 Succinylarginine dihydrolase AM374_RS06780 PF00171 Aldehyde dehydrogenase family AM374_RS06785 PF04958 Arginine N-succinyltransferase beta subunit AM374_RS06790 PF00202 Aminotransferase class-III AM374_RS06800 PF03372 Endonuclease/Exonuclease/phosphatase family AM374_RS06805 PF00293 NUDIX domain AM374_RS06810 PF07383 Protein of unknown function (DUF1496) AM374_RS06815 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM374_RS06815 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM374_RS06820 PF01131 DNA topoisomerase AM374_RS06820 PF01751 Toprim domain AM374_RS06825 PF00586 AIR synthase related protein, N-terminal domain AM374_RS06825 PF02769 AIR synthase related protein, C-terminal domain AM374_RS06830 PF00881 Nitroreductase family AM374_RS06835 PF01343 Peptidase family S49 AM374_RS06840 PF17763 Glutaminase/Asparaginase C-terminal domain AM374_RS06840 PF00710 Asparaginase, N-terminal AM374_RS06845 PF00857 Isochorismatase family AM374_RS06850 PF07023 Protein of unknown function (DUF1315) AM374_RS06855 PF01641 SelR domain AM374_RS06860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM374_RS06860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM374_RS06870 PF01263 Aldose 1-epimerase AM374_RS06875 PF00248 Aldo/keto reductase family AM374_RS06880 PF13186 Iron-sulfur cluster-binding domain AM374_RS06880 PF04055 Radical SAM superfamily AM374_RS06885 PF06629 MltA-interacting protein MipA AM374_RS06890 PF08298 PrkA AAA domain AM374_RS06890 PF06798 PrkA serine protein kinase C-terminal domain AM374_RS06895 PF04285 Protein of unknown function (DUF444) AM374_RS06905 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS06905 PF17155 Gammaproteobacterial periplasmic sensor domain AM374_RS06910 PF04073 Aminoacyl-tRNA editing domain AM374_RS06920 PF04284 Protein of unknown function (DUF441) AM374_RS06925 PF12833 Helix-turn-helix domain AM374_RS06925 PF02311 AraC-like ligand binding domain AM374_RS06930 PF07690 Major Facilitator Superfamily AM374_RS06935 PF04343 Protein of unknown function, DUF488 AM374_RS06945 PF03891 Domain of unknown function (DUF333) AM374_RS06955 PF04226 Transglycosylase associated protein AM374_RS06965 PF08956 Domain of unknown function (DUF1869) AM374_RS06970 PF09313 Domain of unknown function (DUF1971) AM374_RS06980 PF01810 LysE type translocator AM374_RS06985 PF01817 Chorismate mutase type II AM374_RS07000 PF00376 MerR family regulatory protein AM374_RS07000 PF09278 MerR, DNA binding AM374_RS07010 PF01909 Nucleotidyltransferase domain AM374_RS07010 PF13427 Domain of unknown function (DUF4111) AM374_RS07015 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AM374_RS07030 PF00924 Mechanosensitive ion channel AM374_RS07035 PF00005 ABC transporter AM374_RS07040 PF00005 ABC transporter AM374_RS07045 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS07045 PF12911 N-terminal TM domain of oligopeptide transport permease C AM374_RS07050 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS07055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM374_RS07065 PF01292 Prokaryotic cytochrome b561 AM374_RS07080 PF00011 Hsp20/alpha crystallin family AM374_RS07110 PF06316 Enterobacterial Ail/Lom protein AM374_RS07130 PF00313 'Cold-shock' DNA-binding domain AM374_RS07135 PF00652 Ricin-type beta-trefoil lectin domain AM374_RS07140 PF06183 DinI-like family AM374_RS07175 PF00180 Isocitrate/isopropylmalate dehydrogenase AM374_RS07180 PF00849 RNA pseudouridylate synthase AM374_RS07190 PF00293 NUDIX domain AM374_RS07200 PF04356 Protein of unknown function (DUF489) AM374_RS07205 PF00206 Lyase AM374_RS07205 PF08328 Adenylosuccinate lyase C-terminal AM374_RS07210 PF00072 Response regulator receiver domain AM374_RS07210 PF00486 Transcriptional regulatory protein, C terminal AM374_RS07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS07215 PF08918 PhoQ Sensor AM374_RS07220 PF08007 Cupin superfamily protein AM374_RS07230 PF07687 Peptidase dimerisation domain AM374_RS07230 PF01546 Peptidase family M20/M25/M40 AM374_RS07235 PF08402 TOBE domain AM374_RS07235 PF00005 ABC transporter AM374_RS07240 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS07245 PF06767 Sif protein AM374_RS07250 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS07255 PF13416 Bacterial extracellular solute-binding protein AM374_RS07260 PF02146 Sir2 family AM374_RS07265 PF00480 ROK family AM374_RS07270 PF02687 FtsX-like permease family AM374_RS07270 PF12704 MacB-like periplasmic core domain AM374_RS07275 PF00005 ABC transporter AM374_RS07280 PF02687 FtsX-like permease family AM374_RS07280 PF12704 MacB-like periplasmic core domain AM374_RS07285 PF17757 UvrB interaction domain AM374_RS07285 PF03461 TRCF domain AM374_RS07285 PF00271 Helicase conserved C-terminal domain AM374_RS07285 PF00270 DEAD/DEAH box helicase AM374_RS07285 PF02559 CarD-like/TRCF domain AM374_RS07290 PF03734 L,D-transpeptidase catalytic domain AM374_RS07290 PF01476 LysM domain AM374_RS07290 PF17969 L,D-transpeptidase C-terminal domain AM374_RS07295 PF07338 Protein of unknown function (DUF1471) AM374_RS07300 PF00440 Bacterial regulatory proteins, tetR family AM374_RS07305 PF05433 Glycine zipper 2TM domain AM374_RS07310 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS07315 PF05728 Uncharacterised protein family (UPF0227) AM374_RS07320 PF00933 Glycosyl hydrolase family 3 N terminal domain AM374_RS07325 PF01636 Phosphotransferase enzyme family AM374_RS07330 PF13036 Peptidoglycan-synthase activator LpoB AM374_RS07335 PF07233 Protein of unknown function (DUF1425) AM374_RS07340 PF01230 HIT domain AM374_RS07345 PF00593 TonB dependent receptor AM374_RS07345 PF07715 TonB-dependent Receptor Plug Domain AM374_RS07350 PF02378 Phosphotransferase system, EIIC AM374_RS07350 PF00367 phosphotransferase system, EIIB AM374_RS07355 PF01026 TatD related DNase AM374_RS07360 PF09115 DNA polymerase III, delta subunit, C terminal AM374_RS07365 PF02223 Thymidylate kinase AM374_RS07370 PF02618 YceG-like family AM374_RS07375 PF01063 Amino-transferase class IV AM374_RS07380 PF00109 Beta-ketoacyl synthase, N-terminal domain AM374_RS07380 PF02801 Beta-ketoacyl synthase, C-terminal domain AM374_RS07385 PF00550 Phosphopantetheine attachment site AM374_RS07395 PF00698 Acyl transferase domain AM374_RS07400 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM374_RS07400 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM374_RS07405 PF02504 Fatty acid synthesis protein AM374_RS07410 PF01783 Ribosomal L32p protein family AM374_RS07415 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM374_RS07420 PF02545 Maf-like protein AM374_RS07435 PF01479 S4 domain AM374_RS07435 PF00849 RNA pseudouridylate synthase AM374_RS07445 PF00575 S1 RNA binding domain AM374_RS07445 PF10150 Ribonuclease E/G family AM374_RS07445 PF12111 Polyribonucleotide phosphorylase C terminal AM374_RS07455 PF00669 Bacterial flagellin N-terminal helical region AM374_RS07460 PF00460 Flagella basal body rod protein AM374_RS07460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM374_RS07465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM374_RS07465 PF10135 Rod binding protein AM374_RS07470 PF02119 Flagellar P-ring protein AM374_RS07475 PF02107 Flagellar L-ring protein AM374_RS07480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM374_RS07480 PF00460 Flagella basal body rod protein AM374_RS07485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM374_RS07485 PF00460 Flagella basal body rod protein AM374_RS07490 PF07559 Flagellar basal body protein FlaE AM374_RS07490 PF00460 Flagella basal body rod protein AM374_RS07490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM374_RS07495 PF13860 FlgD Ig-like domain AM374_RS07495 PF03963 Flagellar hook capping protein - N-terminal region AM374_RS07495 PF13861 FlgD Tudor-like domain AM374_RS07500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM374_RS07500 PF00460 Flagella basal body rod protein AM374_RS07505 PF00460 Flagella basal body rod protein AM374_RS07515 PF13144 Chaperone for flagella basal body P-ring formation AM374_RS07520 PF04316 Anti-sigma-28 factor, FlgM AM374_RS07525 PF05130 FlgN protein AM374_RS07530 PF03023 Lipid II flippase MurJ AM374_RS07535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM374_RS07540 PF04337 Protein of unknown function, DUF480 AM374_RS07545 PF13302 Acetyltransferase (GNAT) domain AM374_RS07550 PF07690 Major Facilitator Superfamily AM374_RS07555 PF13417 Glutathione S-transferase, N-terminal domain AM374_RS07555 PF04399 Glutaredoxin 2, C terminal domain AM374_RS07560 PF07273 Protein of unknown function (DUF1439) AM374_RS07565 PF01979 Amidohydrolase family AM374_RS07570 PF06183 DinI-like family AM374_RS07575 PF13991 BssS protein family AM374_RS07580 PF01266 FAD dependent oxidoreductase AM374_RS07585 PF10968 Protein of unknown function (DUF2770) AM374_RS07595 PF01292 Prokaryotic cytochrome b561 AM374_RS07600 PF04264 YceI-like domain AM374_RS07605 PF00581 Rhodanese-like domain AM374_RS07605 PF17773 UPF0176 acylphosphatase like domain AM374_RS07605 PF12368 Rhodanase C-terminal AM374_RS07610 PF03279 Bacterial lipid A biosynthesis acyltransferase AM374_RS07620 PF07690 Major Facilitator Superfamily AM374_RS07625 PF13984 MsyB protein AM374_RS07630 PF07119 Protein of unknown function (DUF1375) AM374_RS07635 PF00535 Glycosyl transferase family 2 AM374_RS07640 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM374_RS07645 PF01757 Acyltransferase family AM374_RS07650 PF13091 PLD-like domain AM374_RS07655 PF01661 Macro domain AM374_RS07665 PF10610 Thin aggregative fimbriae synthesis protein AM374_RS07670 PF07012 Curlin associated repeat AM374_RS07675 PF07012 Curlin associated repeat AM374_RS07685 PF00196 Bacterial regulatory proteins, luxR family AM374_RS07690 PF10627 Curli assembly protein CsgE AM374_RS07695 PF10614 Type VIII secretion system (T8SS), CsgF protein AM374_RS07700 PF03783 Curli production assembly/transport component CsgG AM374_RS07705 PF06496 Protein of unknown function (DUF1097) AM374_RS07710 PF02613 Nitrate reductase delta subunit AM374_RS07715 PF02811 PHP domain AM374_RS07720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM374_RS07830 PF06167 Glucose-regulated metallo-peptidase M90 AM374_RS07845 PF00589 Phage integrase family AM374_RS07845 PF13356 Arm DNA-binding domain AM374_RS07860 PF13693 Winged helix-turn-helix DNA-binding AM374_RS07890 PF13356 Arm DNA-binding domain AM374_RS07890 PF00589 Phage integrase family AM374_RS07940 PF01048 Phosphorylase superfamily AM374_RS07940 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM374_RS07965 PF01554 MatE AM374_RS07985 PF01758 Sodium Bile acid symporter family AM374_RS07990 PF02374 Anion-transporting ATPase AM374_RS07995 PF06953 Arsenical resistance operon trans-acting repressor ArsD AM374_RS08000 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM374_RS08005 PF01022 Bacterial regulatory protein, arsR family AM374_RS08015 PF03734 L,D-transpeptidase catalytic domain AM374_RS08015 PF17969 L,D-transpeptidase C-terminal domain AM374_RS08020 PF02277 Phosphoribosyltransferase AM374_RS08025 PF02654 Cobalamin-5-phosphate synthase AM374_RS08030 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM374_RS08035 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM374_RS08040 PF00005 ABC transporter AM374_RS08045 PF02361 Cobalt transport protein AM374_RS08050 PF02553 Cobalt transport protein component CbiN AM374_RS08055 PF01891 Cobalt uptake substrate-specific transmembrane region AM374_RS08060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM374_RS08065 PF06180 Cobalt chelatase (CbiK) AM374_RS08070 PF02571 Precorrin-6x reductase CbiJ/CobK AM374_RS08075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM374_RS08080 PF01890 Cobalamin synthesis G C-terminus AM374_RS08080 PF11761 Cobalamin biosynthesis central region AM374_RS08080 PF11760 Cobalamin synthesis G N-terminal AM374_RS08085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM374_RS08090 PF05175 Methyltransferase small domain AM374_RS08095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM374_RS08100 PF01888 CbiD AM374_RS08105 PF02570 Precorrin-8X methylmutase AM374_RS08110 PF03186 CobD/Cbib protein AM374_RS08115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM374_RS08115 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM374_RS08120 PF12833 Helix-turn-helix domain AM374_RS08120 PF10114 Sensory domain found in PocR AM374_RS08125 PF00230 Major intrinsic protein AM374_RS08130 PF00936 BMC domain AM374_RS08135 PF00936 BMC domain AM374_RS08140 PF02286 Dehydratase large subunit AM374_RS08145 PF02288 Dehydratase medium subunit AM374_RS08150 PF02287 Dehydratase small subunit AM374_RS08155 PF08841 Diol dehydratase reactivase ATPase-like domain AM374_RS08155 PF18427 DD-reactivating factor swiveling domain AM374_RS08165 PF00936 BMC domain AM374_RS08170 PF00936 BMC domain AM374_RS08175 PF06130 Phosphate propanoyltransferase AM374_RS08185 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM374_RS08190 PF01923 Cobalamin adenosyltransferase AM374_RS08195 PF00171 Aldehyde dehydrogenase family AM374_RS08200 PF00465 Iron-containing alcohol dehydrogenase AM374_RS08200 PF00171 Aldehyde dehydrogenase family AM374_RS08205 PF13375 RnfC Barrel sandwich hybrid domain AM374_RS08205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM374_RS08205 PF13237 4Fe-4S dicluster domain AM374_RS08205 PF10531 SLBB domain AM374_RS08215 PF00936 BMC domain AM374_RS08220 PF10662 Ethanolamine utilisation - propanediol utilisation AM374_RS08225 PF00871 Acetokinase family AM374_RS08230 PF00288 GHMP kinases N terminal domain AM374_RS08235 PF04363 Protein of unknown function (DUF496) AM374_RS08240 PF04632 Fusaric acid resistance protein family AM374_RS08250 PF06445 GyrI-like small molecule binding domain AM374_RS08255 PF00768 D-alanyl-D-alanine carboxypeptidase AM374_RS08255 PF07943 Penicillin-binding protein 5, C-terminal domain AM374_RS08260 PF01292 Prokaryotic cytochrome b561 AM374_RS08265 PF13247 4Fe-4S dicluster domain AM374_RS08265 PF12800 4Fe-4S binding domain AM374_RS08270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS08270 PF00384 Molybdopterin oxidoreductase AM374_RS08270 PF01568 Molydopterin dinucleotide binding domain AM374_RS08285 PF13981 SopA-like central domain AM374_RS08285 PF13979 SopA-like catalytic domain AM374_RS08290 PF00929 Exonuclease AM374_RS08290 PF08411 Exonuclease C-terminal AM374_RS08295 PF13520 Amino acid permease AM374_RS08305 PF03466 LysR substrate binding domain AM374_RS08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS08310 PF01370 NAD dependent epimerase/dehydratase family AM374_RS08320 PF08029 HisG, C-terminal domain AM374_RS08320 PF01634 ATP phosphoribosyltransferase AM374_RS08325 PF00815 Histidinol dehydrogenase AM374_RS08330 PF00155 Aminotransferase class I and II AM374_RS08335 PF00475 Imidazoleglycerol-phosphate dehydratase AM374_RS08340 PF00117 Glutamine amidotransferase class-I AM374_RS08345 PF00977 Histidine biosynthesis protein AM374_RS08350 PF00977 Histidine biosynthesis protein AM374_RS08355 PF01502 Phosphoribosyl-AMP cyclohydrolase AM374_RS08355 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM374_RS08360 PF02706 Chain length determinant protein AM374_RS08365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM374_RS08365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM374_RS08375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM374_RS08375 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AM374_RS08380 PF02397 Bacterial sugar transferase AM374_RS08385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM374_RS08385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM374_RS08385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM374_RS08385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM374_RS08390 PF00483 Nucleotidyl transferase AM374_RS08390 PF01050 Mannose-6-phosphate isomerase AM374_RS08395 PF00535 Glycosyl transferase family 2 AM374_RS08415 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AM374_RS08420 PF00483 Nucleotidyl transferase AM374_RS08425 PF04321 RmlD substrate binding domain AM374_RS08430 PF16363 GDP-mannose 4,6 dehydratase AM374_RS08435 PF00483 Nucleotidyl transferase AM374_RS08445 PF13439 Glycosyltransferase Family 4 AM374_RS08445 PF00534 Glycosyl transferases group 1 AM374_RS08450 PF04230 Polysaccharide pyruvyl transferase AM374_RS08460 PF02397 Bacterial sugar transferase AM374_RS08465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM374_RS08465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM374_RS08465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM374_RS08465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM374_RS08470 PF00483 Nucleotidyl transferase AM374_RS08470 PF01050 Mannose-6-phosphate isomerase AM374_RS08475 PF00534 Glycosyl transferases group 1 AM374_RS08475 PF13579 Glycosyl transferase 4-like domain AM374_RS08480 PF00293 NUDIX domain AM374_RS08485 PF01370 NAD dependent epimerase/dehydratase family AM374_RS08490 PF16363 GDP-mannose 4,6 dehydratase AM374_RS08495 PF00132 Bacterial transferase hexapeptide (six repeats) AM374_RS08500 PF00535 Glycosyl transferase family 2 AM374_RS08510 PF00534 Glycosyl transferases group 1 AM374_RS08510 PF13439 Glycosyltransferase Family 4 AM374_RS08515 PF00132 Bacterial transferase hexapeptide (six repeats) AM374_RS08520 PF00535 Glycosyl transferase family 2 AM374_RS08525 PF13614 AAA domain AM374_RS08525 PF02706 Chain length determinant protein AM374_RS08525 PF13807 G-rich domain on putative tyrosine kinase AM374_RS08530 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM374_RS08535 PF02563 Polysaccharide biosynthesis/export protein AM374_RS08535 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM374_RS08535 PF10531 SLBB domain AM374_RS08545 PF00571 CBS domain AM374_RS08545 PF03471 Transporter associated domain AM374_RS08545 PF03741 Integral membrane protein TerC family AM374_RS08550 PF05170 AsmA family AM374_RS08555 PF00692 dUTPase AM374_RS08560 PF00485 Phosphoribulokinase / Uridine kinase family AM374_RS08565 PF08447 PAS fold AM374_RS08565 PF08448 PAS fold AM374_RS08565 PF05231 MASE1 AM374_RS08565 PF13426 PAS domain AM374_RS08565 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS08565 PF00563 EAL domain AM374_RS08570 PF06029 AlkA N-terminal domain AM374_RS08570 PF00730 HhH-GPD superfamily base excision DNA repair protein AM374_RS08580 PF00012 Hsp70 protein AM374_RS08590 PF13533 Biotin-lipoyl like AM374_RS08595 PF00873 AcrB/AcrD/AcrF family AM374_RS08600 PF00873 AcrB/AcrD/AcrF family AM374_RS08605 PF07690 Major Facilitator Superfamily AM374_RS08610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS08610 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS08610 PF00672 HAMP domain AM374_RS08615 PF00486 Transcriptional regulatory protein, C terminal AM374_RS08615 PF00072 Response regulator receiver domain AM374_RS08650 PF03811 InsA N-terminal domain AM374_RS08650 PF12759 InsA C-terminal domain AM374_RS08670 PF03130 PBS lyase HEAT-like repeat AM374_RS08725 PF16325 Peptidase family U32 C-terminal domain AM374_RS08725 PF01136 Peptidase family U32 AM374_RS08735 PF05932 Tir chaperone protein (CesT) family AM374_RS08745 PF00781 Diacylglycerol kinase catalytic domain AM374_RS08750 PF01791 DeoC/LacD family aldolase AM374_RS08755 PF03825 Nucleoside H+ symporter AM374_RS08760 PF03747 ADP-ribosylglycohydrolase AM374_RS08765 PF00294 pfkB family carbohydrate kinase AM374_RS08770 PF00392 Bacterial regulatory proteins, gntR family AM374_RS08770 PF07702 UTRA domain AM374_RS08775 PF08543 Phosphomethylpyrimidine kinase AM374_RS08780 PF02110 Hydroxyethylthiazole kinase family AM374_RS08785 PF11776 Nickel/cobalt transporter regulator AM374_RS08790 PF00419 Fimbrial protein AM374_RS08795 PF00577 Outer membrane usher protein AM374_RS08795 PF13954 PapC N-terminal domain AM374_RS08795 PF13953 PapC C-terminal domain AM374_RS08800 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS08800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS08815 PF10609 NUBPL iron-transfer P-loop NTPase AM374_RS08820 PF01588 Putative tRNA binding domain AM374_RS08820 PF09334 tRNA synthetases class I (M) AM374_RS08825 PF06998 Protein of unknown function (DUF1307) AM374_RS08835 PF07308 Protein of unknown function (DUF1456) AM374_RS08840 PF00072 Response regulator receiver domain AM374_RS08840 PF04397 LytTr DNA-binding domain AM374_RS08845 PF06580 Histidine kinase AM374_RS08845 PF07694 5TMR of 5TMR-LYT AM374_RS08850 PF13411 MerR HTH family regulatory protein AM374_RS08860 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS08865 PF00005 ABC transporter AM374_RS08870 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS08875 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM374_RS08880 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM374_RS08880 PF00933 Glycosyl hydrolase family 3 N terminal domain AM374_RS08880 PF14310 Fibronectin type III-like domain AM374_RS08885 PF01565 FAD binding domain AM374_RS08885 PF09330 D-lactate dehydrogenase, membrane binding AM374_RS08890 PF00768 D-alanyl-D-alanine carboxypeptidase AM374_RS08900 PF04893 Yip1 domain AM374_RS08905 PF09335 SNARE associated Golgi protein AM374_RS08915 PF02321 Outer membrane efflux protein AM374_RS08925 PF01207 Dihydrouridine synthase (Dus) AM374_RS08930 PF01494 FAD binding domain AM374_RS08935 PF14497 Glutathione S-transferase, C-terminal domain AM374_RS08935 PF02798 Glutathione S-transferase, N-terminal domain AM374_RS08940 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM374_RS08945 PF07883 Cupin domain AM374_RS08950 PF07690 Major Facilitator Superfamily AM374_RS08955 PF03466 LysR substrate binding domain AM374_RS08955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS08960 PF03788 LrgA family AM374_RS08965 PF04172 LrgB-like family AM374_RS08970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM374_RS08970 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AM374_RS08975 PF02698 DUF218 domain AM374_RS08980 PF10808 Protein of unknown function (DUF2542) AM374_RS08985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM374_RS08985 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS08990 PF01180 Dihydroorotate dehydrogenase AM374_RS08995 PF02653 Branched-chain amino acid transport system / permease component AM374_RS09000 PF00005 ABC transporter AM374_RS09005 PF13407 Periplasmic binding protein domain AM374_RS09010 PF00356 Bacterial regulatory proteins, lacI family AM374_RS09015 PF04235 Protein of unknown function (DUF418) AM374_RS09020 PF01227 GTP cyclohydrolase I AM374_RS09030 PF00756 Putative esterase AM374_RS09040 PF03315 Serine dehydratase beta chain AM374_RS09040 PF03313 Serine dehydratase alpha chain AM374_RS09045 PF18429 Domain of unknown function (DUF5609) AM374_RS09050 PF07690 Major Facilitator Superfamily AM374_RS09055 PF00593 TonB dependent receptor AM374_RS09055 PF07715 TonB-dependent Receptor Plug Domain AM374_RS09065 PF00324 Amino acid permease AM374_RS09070 PF03466 LysR substrate binding domain AM374_RS09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS09075 PF03601 Conserved hypothetical protein 698 AM374_RS09080 PF01261 Xylose isomerase-like TIM barrel AM374_RS09085 PF02378 Phosphotransferase system, EIIC AM374_RS09085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM374_RS09090 PF00294 pfkB family carbohydrate kinase AM374_RS09095 PF00381 PTS HPr component phosphorylation site AM374_RS09095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM374_RS09100 PF07690 Major Facilitator Superfamily AM374_RS09115 PF03692 Putative zinc- or iron-chelating domain AM374_RS09120 PF08207 Elongation factor P (EF-P) KOW-like domain AM374_RS09120 PF01132 Elongation factor P (EF-P) OB domain AM374_RS09120 PF09285 Elongation factor P, C-terminal AM374_RS09125 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM374_RS09125 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM374_RS09130 PF01569 PAP2 superfamily AM374_RS09140 PF00877 NlpC/P60 family AM374_RS09150 PF12792 CSS motif domain associated with EAL AM374_RS09150 PF00563 EAL domain AM374_RS09155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM374_RS09160 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS09165 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS09165 PF12911 N-terminal TM domain of oligopeptide transport permease C AM374_RS09170 PF00005 ABC transporter AM374_RS09170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM374_RS09175 PF13989 YejG-like protein AM374_RS09185 PF07690 Major Facilitator Superfamily AM374_RS09190 PF00849 RNA pseudouridylate synthase AM374_RS09190 PF01479 S4 domain AM374_RS09195 PF04851 Type III restriction enzyme, res subunit AM374_RS09195 PF00271 Helicase conserved C-terminal domain AM374_RS09200 PF01386 Ribosomal L25p family AM374_RS09210 PF04245 37-kD nucleoid-associated bacterial protein AM374_RS09215 PF07208 Protein of unknown function (DUF1414) AM374_RS09220 PF00884 Sulfatase AM374_RS09220 PF11893 Domain of unknown function (DUF3413) AM374_RS09250 PF00196 Bacterial regulatory proteins, luxR family AM374_RS09250 PF00072 Response regulator receiver domain AM374_RS09255 PF03918 Cytochrome C biogenesis protein AM374_RS09260 PF08534 Redoxin AM374_RS09265 PF01578 Cytochrome C assembly protein AM374_RS09265 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM374_RS09270 PF03100 CcmE AM374_RS09275 PF04995 Heme exporter protein D (CcmD) AM374_RS09280 PF01578 Cytochrome C assembly protein AM374_RS09285 PF03379 CcmB protein AM374_RS09290 PF00005 ABC transporter AM374_RS09295 PF03264 NapC/NirT cytochrome c family, N-terminal region AM374_RS09300 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AM374_RS09310 PF12801 4Fe-4S binding domain AM374_RS09310 PF13237 4Fe-4S dicluster domain AM374_RS09315 PF12800 4Fe-4S binding domain AM374_RS09315 PF12838 4Fe-4S dicluster domain AM374_RS09320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS09320 PF00384 Molybdopterin oxidoreductase AM374_RS09320 PF01568 Molydopterin dinucleotide binding domain AM374_RS09325 PF03927 NapD protein AM374_RS09330 PF13187 4Fe-4S dicluster domain AM374_RS09330 PF00037 4Fe-4S binding domain AM374_RS09330 PF12800 4Fe-4S binding domain AM374_RS09335 PF03974 Ecotin AM374_RS09340 PF00005 ABC transporter AM374_RS09345 PF13532 2OG-Fe(II) oxygenase superfamily AM374_RS09350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM374_RS09350 PF02805 Metal binding domain of Ada AM374_RS09350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM374_RS09350 PF12833 Helix-turn-helix domain AM374_RS09355 PF02424 ApbE family AM374_RS09360 PF00267 Gram-negative porin AM374_RS09370 PF01627 Hpt domain AM374_RS09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS09370 PF16359 RcsD-ABL domain AM374_RS09375 PF00072 Response regulator receiver domain AM374_RS09375 PF00196 Bacterial regulatory proteins, luxR family AM374_RS09380 PF00072 Response regulator receiver domain AM374_RS09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS09380 PF09456 RcsC Alpha-Beta-Loop (ABL) AM374_RS09380 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS09385 PF00521 DNA gyrase/topoisomerase IV, subunit A AM374_RS09385 PF03989 DNA gyrase C-terminal domain, beta-propeller AM374_RS09395 PF13378 Enolase C-terminal domain-like AM374_RS09395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM374_RS09400 PF07690 Major Facilitator Superfamily AM374_RS09415 PF00317 Ribonucleotide reductase, all-alpha domain AM374_RS09415 PF02867 Ribonucleotide reductase, barrel domain AM374_RS09415 PF03477 ATP cone domain AM374_RS09420 PF00268 Ribonucleotide reductase, small chain AM374_RS09425 PF00111 2Fe-2S iron-sulfur cluster binding domain AM374_RS09430 PF07690 Major Facilitator Superfamily AM374_RS09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS09435 PF03466 LysR substrate binding domain AM374_RS09440 PF03009 Glycerophosphoryl diester phosphodiesterase family AM374_RS09445 PF07690 Major Facilitator Superfamily AM374_RS09450 PF04324 BFD-like [2Fe-2S] binding domain AM374_RS09450 PF01266 FAD dependent oxidoreductase AM374_RS09455 PF00890 FAD binding domain AM374_RS09460 PF13183 4Fe-4S dicluster domain AM374_RS09460 PF02754 Cysteine-rich domain AM374_RS09475 PF00994 Probable molybdopterin binding domain AM374_RS09480 PF03328 HpcH/HpaI aldolase/citrate lyase family AM374_RS09485 PF07690 Major Facilitator Superfamily AM374_RS09490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM374_RS09490 PF13378 Enolase C-terminal domain-like AM374_RS09495 PF09339 IclR helix-turn-helix domain AM374_RS09495 PF01614 Bacterial transcriptional regulator AM374_RS09500 PF00994 Probable molybdopterin binding domain AM374_RS09505 PF07437 YfaZ precursor AM374_RS09510 PF00293 NUDIX domain AM374_RS09515 PF00300 Histidine phosphatase superfamily (branch 1) AM374_RS09520 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM374_RS09525 PF00535 Glycosyl transferase family 2 AM374_RS09530 PF00551 Formyl transferase AM374_RS09530 PF02911 Formyl transferase, C-terminal domain AM374_RS09530 PF01370 NAD dependent epimerase/dehydratase family AM374_RS09535 PF01522 Polysaccharide deacetylase AM374_RS09540 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM374_RS09545 PF00892 EamA-like transporter family AM374_RS09560 PF00501 AMP-binding enzyme AM374_RS09560 PF13193 AMP-binding enzyme C-terminal domain AM374_RS09565 PF13378 Enolase C-terminal domain-like AM374_RS09570 PF00378 Enoyl-CoA hydratase/isomerase AM374_RS09575 PF12697 Alpha/beta hydrolase family AM374_RS09580 PF16582 Middle domain of thiamine pyrophosphate AM374_RS09580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM374_RS09580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM374_RS09585 PF00425 chorismate binding enzyme AM374_RS09590 PF05957 Bacterial protein of unknown function (DUF883) AM374_RS09595 PF13673 Acetyltransferase (GNAT) domain AM374_RS09600 PF12706 Beta-lactamase superfamily domain AM374_RS09605 PF00072 Response regulator receiver domain AM374_RS09605 PF01584 CheW-like domain AM374_RS09610 PF12450 von Willebrand factor AM374_RS09610 PF12034 Domain of unknown function (DUF3520) AM374_RS09610 PF00092 von Willebrand factor type A domain AM374_RS09615 PF03797 Autotransporter beta-domain AM374_RS09620 PF00361 Proton-conducting membrane transporter AM374_RS09625 PF00361 Proton-conducting membrane transporter AM374_RS09630 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM374_RS09630 PF00361 Proton-conducting membrane transporter AM374_RS09635 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM374_RS09640 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM374_RS09645 PF12838 4Fe-4S dicluster domain AM374_RS09650 PF00146 NADH dehydrogenase AM374_RS09655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS09655 PF00384 Molybdopterin oxidoreductase AM374_RS09655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM374_RS09655 PF01568 Molydopterin dinucleotide binding domain AM374_RS09660 PF10531 SLBB domain AM374_RS09660 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM374_RS09660 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM374_RS09670 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM374_RS09670 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM374_RS09675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM374_RS09680 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM374_RS09690 PF03466 LysR substrate binding domain AM374_RS09690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS09700 PF00155 Aminotransferase class I and II AM374_RS09715 PF02080 TrkA-C domain AM374_RS09715 PF03600 Citrate transporter AM374_RS09720 PF13419 Haloacid dehalogenase-like hydrolase AM374_RS09725 PF03887 YfbU domain AM374_RS09730 PF04217 Protein of unknown function, DUF412 AM374_RS09735 PF00871 Acetokinase family AM374_RS09740 PF01515 Phosphate acetyl/butaryl transferase AM374_RS09740 PF07085 DRTGG domain AM374_RS09745 PF03606 C4-dicarboxylate anaerobic carrier AM374_RS09750 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM374_RS09750 PF02779 Transketolase, pyrimidine binding domain AM374_RS09750 PF02780 Transketolase, C-terminal domain AM374_RS09755 PF00456 Transketolase, thiamine diphosphate binding domain AM374_RS09760 PF03611 PTS system sugar-specific permease component AM374_RS09770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM374_RS09780 PF00356 Bacterial regulatory proteins, lacI family AM374_RS09785 PF00293 NUDIX domain AM374_RS09790 PF12850 Calcineurin-like phosphoesterase superfamily domain AM374_RS09795 PF14834 Glutathione S-transferase, C-terminal domain AM374_RS09795 PF02798 Glutathione S-transferase, N-terminal domain AM374_RS09800 PF02798 Glutathione S-transferase, N-terminal domain AM374_RS09800 PF00043 Glutathione S-transferase, C-terminal domain AM374_RS09805 PF08338 Domain of unknown function (DUF1731) AM374_RS09805 PF01370 NAD dependent epimerase/dehydratase family AM374_RS09810 PF00005 ABC transporter AM374_RS09815 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS09820 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS09825 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM374_RS09830 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM374_RS09840 PF02441 Flavoprotein AM374_RS09845 PF00324 Amino acid permease AM374_RS09850 PF01168 Alanine racemase, N-terminal domain AM374_RS09855 PF13520 Amino acid permease AM374_RS09860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM374_RS09860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM374_RS09865 PF00158 Sigma-54 interaction domain AM374_RS09865 PF13426 PAS domain AM374_RS09865 PF02954 Bacterial regulatory protein, Fis family AM374_RS09870 PF00156 Phosphoribosyl transferase domain AM374_RS09875 PF02674 Colicin V production protein AM374_RS09880 PF05036 Sporulation related domain AM374_RS09885 PF02875 Mur ligase family, glutamate ligase domain AM374_RS09885 PF08245 Mur ligase middle domain AM374_RS09890 PF01039 Carboxyl transferase domain AM374_RS09890 PF17848 Acetyl-coA carboxylase zinc finger domain AM374_RS09895 PF09335 SNARE associated Golgi protein AM374_RS09900 PF01416 tRNA pseudouridine synthase AM374_RS09905 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM374_RS09905 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM374_RS09910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM374_RS09910 PF11890 Domain of unknown function (DUF3410) AM374_RS09910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM374_RS09920 PF07690 Major Facilitator Superfamily AM374_RS09945 PF02517 CPBP intramembrane metalloprotease AM374_RS09950 PF00109 Beta-ketoacyl synthase, N-terminal domain AM374_RS09950 PF02801 Beta-ketoacyl synthase, C-terminal domain AM374_RS09955 PF01266 FAD dependent oxidoreductase AM374_RS09955 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM374_RS09960 PF08891 YfcL protein AM374_RS09965 PF04315 Elongation factor P hydroxylase AM374_RS09970 PF01925 Sulfite exporter TauE/SafE AM374_RS09975 PF03411 Penicillin-insensitive murein endopeptidase AM374_RS09980 PF01264 Chorismate synthase AM374_RS09985 PF05175 Methyltransferase small domain AM374_RS09990 PF01713 Smr domain AM374_RS09995 PF00300 Histidine phosphatase superfamily (branch 1) AM374_RS10000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM374_RS10000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM374_RS10000 PF00378 Enoyl-CoA hydratase/isomerase AM374_RS10005 PF00108 Thiolase, N-terminal domain AM374_RS10005 PF02803 Thiolase, C-terminal domain AM374_RS10010 PF04175 Protein of unknown function (DUF406) AM374_RS10015 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM374_RS10020 PF04333 MlaA lipoprotein AM374_RS10025 PF01226 Formate/nitrite transporter AM374_RS10035 PF00589 Phage integrase family AM374_RS10035 PF13356 Arm DNA-binding domain AM374_RS10035 PF14659 Phage integrase, N-terminal SAM-like domain AM374_RS10040 PF06183 DinI-like family AM374_RS10140 PF00574 Clp protease AM374_RS10145 PF04860 Phage portal protein AM374_RS10150 PF03354 Phage Terminase AM374_RS10165 PF03245 Bacteriophage Rz lysis protein AM374_RS10170 PF00959 Phage lysozyme AM374_RS10185 PF03589 Antitermination protein AM374_RS10250 PF00772 DnaB-like helicase N terminal domain AM374_RS10250 PF03796 DnaB-like helicase C terminal domain AM374_RS10275 PF00717 Peptidase S24-like AM374_RS10275 PF01381 Helix-turn-helix AM374_RS10325 PF04098 Rad52/22 family double-strand break repair protein AM374_RS10330 PF00436 Single-strand binding protein family AM374_RS10355 PF00145 C-5 cytosine-specific DNA methylase AM374_RS10375 PF01278 Omptin family AM374_RS10380 PF14532 Sigma-54 interaction domain AM374_RS10380 PF00072 Response regulator receiver domain AM374_RS10380 PF02954 Bacterial regulatory protein, Fis family AM374_RS10385 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS10385 PF00672 HAMP domain AM374_RS10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS10400 PF07690 Major Facilitator Superfamily AM374_RS10410 PF10810 Protein of unknown function (DUF2545) AM374_RS10415 PF03279 Bacterial lipid A biosynthesis acyltransferase AM374_RS10425 PF00155 Aminotransferase class I and II AM374_RS10430 PF02685 Glucokinase AM374_RS10435 PF00654 Voltage gated chloride channel AM374_RS10440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM374_RS10440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM374_RS10440 PF00205 Thiamine pyrophosphate enzyme, central domain AM374_RS10450 PF00248 Aldo/keto reductase family AM374_RS10455 PF10697 Protein of unknown function (DUF2502) AM374_RS10460 PF01566 Natural resistance-associated macrophage protein AM374_RS10465 PF07670 Nucleoside recognition AM374_RS10465 PF07662 Na+ dependent nucleoside transporter C-terminus AM374_RS10465 PF01773 Na+ dependent nucleoside transporter N-terminus AM374_RS10470 PF00563 EAL domain AM374_RS10470 PF05231 MASE1 AM374_RS10490 PF07037 Putative transcription regulator (DUF1323) AM374_RS10495 PF07037 Putative transcription regulator (DUF1323) AM374_RS10500 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM374_RS10525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS10525 PF03466 LysR substrate binding domain AM374_RS10535 PF03825 Nucleoside H+ symporter AM374_RS10540 PF01048 Phosphorylase superfamily AM374_RS10545 PF03502 Nucleoside-specific channel-forming protein, Tsx AM374_RS10550 PF03466 LysR substrate binding domain AM374_RS10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS10555 PF13593 SBF-like CPA transporter family (DUF4137) AM374_RS10560 PF12843 Putative quorum-sensing-regulated virulence factor AM374_RS10565 PF12826 Helix-hairpin-helix motif AM374_RS10565 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM374_RS10565 PF03120 NAD-dependent DNA ligase OB-fold domain AM374_RS10565 PF01653 NAD-dependent DNA ligase adenylation domain AM374_RS10565 PF00533 BRCA1 C Terminus (BRCT) domain AM374_RS10570 PF04354 ZipA, C-terminal FtsZ-binding domain AM374_RS10580 PF00291 Pyridoxal-phosphate dependent enzyme AM374_RS10585 PF00381 PTS HPr component phosphorylation site AM374_RS10590 PF00391 PEP-utilising enzyme, mobile domain AM374_RS10590 PF02896 PEP-utilising enzyme, TIM barrel domain AM374_RS10590 PF05524 PEP-utilising enzyme, N-terminal AM374_RS10595 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM374_RS10605 PF08543 Phosphomethylpyrimidine kinase AM374_RS10610 PF00392 Bacterial regulatory proteins, gntR family AM374_RS10610 PF00155 Aminotransferase class I and II AM374_RS10615 PF00117 Glutamine amidotransferase class-I AM374_RS10620 PF17263 Family of unknown function (DUF5329) AM374_RS10640 PF00291 Pyridoxal-phosphate dependent enzyme AM374_RS10645 PF00005 ABC transporter AM374_RS10650 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS10655 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS10670 PF04261 Dyp-type peroxidase family AM374_RS10675 PF06572 Protein of unknown function (DUF1131) AM374_RS10680 PF11143 Protein of unknown function (DUF2919) AM374_RS10685 PF00583 Acetyltransferase (GNAT) family AM374_RS10690 PF01520 N-acetylmuramoyl-L-alanine amidase AM374_RS10695 PF01218 Coproporphyrinogen III oxidase AM374_RS10705 PF09234 Domain of unknown function (DUF1963) AM374_RS10710 PF12833 Helix-turn-helix domain AM374_RS10715 PF16365 Ethanolamine utilization protein EutK C-terminus AM374_RS10715 PF00936 BMC domain AM374_RS10720 PF00936 BMC domain AM374_RS10725 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM374_RS10730 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM374_RS10735 PF06277 Ethanolamine utilisation protein EutA AM374_RS10740 PF04346 Ethanolamine utilisation protein, EutH AM374_RS10745 PF00465 Iron-containing alcohol dehydrogenase AM374_RS10755 PF00171 Aldehyde dehydrogenase family AM374_RS10760 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM374_RS10765 PF00936 BMC domain AM374_RS10770 PF01515 Phosphate acetyl/butaryl transferase AM374_RS10775 PF01923 Cobalamin adenosyltransferase AM374_RS10780 PF06249 Ethanolamine utilisation protein EutQ AM374_RS10785 PF10662 Ethanolamine utilisation - propanediol utilisation AM374_RS10790 PF00936 BMC domain AM374_RS10795 PF01515 Phosphate acetyl/butaryl transferase AM374_RS10795 PF00390 Malic enzyme, N-terminal domain AM374_RS10795 PF03949 Malic enzyme, NAD binding domain AM374_RS10805 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM374_RS10810 PF02779 Transketolase, pyrimidine binding domain AM374_RS10810 PF00456 Transketolase, thiamine diphosphate binding domain AM374_RS10810 PF02780 Transketolase, C-terminal domain AM374_RS10820 PF06674 Protein of unknown function (DUF1176) AM374_RS10825 PF00293 NUDIX domain AM374_RS10830 PF00144 Beta-lactamase AM374_RS10840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM374_RS10840 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS10840 PF13247 4Fe-4S dicluster domain AM374_RS10850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS10850 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM374_RS10850 PF00672 HAMP domain AM374_RS10850 PF07730 Histidine kinase AM374_RS10855 PF00873 AcrB/AcrD/AcrF family AM374_RS10865 PF03960 ArsC family AM374_RS10870 PF01546 Peptidase family M20/M25/M40 AM374_RS10870 PF07687 Peptidase dimerisation domain AM374_RS10875 PF13980 Uncharacterised protein family (UPF0370) AM374_RS10880 PF13718 GNAT acetyltransferase 2 AM374_RS10880 PF08351 Domain of unknown function (DUF1726) AM374_RS10880 PF05127 Helicase AM374_RS10880 PF17176 tRNA-binding domain AM374_RS10885 PF04228 Putative neutral zinc metallopeptidase AM374_RS10890 PF01259 SAICAR synthetase AM374_RS10895 PF06804 NlpB/DapX lipoprotein AM374_RS10900 PF00701 Dihydrodipicolinate synthetase family AM374_RS10905 PF01842 ACT domain AM374_RS10910 PF00578 AhpC/TSA family AM374_RS10915 PF02595 Glycerate kinase family AM374_RS10920 PF02447 GntP family permease AM374_RS10925 PF05651 Putative sugar diacid recognition AM374_RS10925 PF17853 GGDEF-like domain AM374_RS10925 PF13556 PucR C-terminal helix-turn-helix domain AM374_RS10930 PF01594 AI-2E family transporter AM374_RS10935 PF01435 Peptidase family M48 AM374_RS10940 PF03960 ArsC family AM374_RS10945 PF00308 Bacterial dnaA protein AM374_RS10950 PF00860 Permease family AM374_RS10960 PF02769 AIR synthase related protein, C-terminal domain AM374_RS10960 PF00586 AIR synthase related protein, N-terminal domain AM374_RS10965 PF00551 Formyl transferase AM374_RS10970 PF02503 Polyphosphate kinase middle domain AM374_RS10970 PF13090 Polyphosphate kinase C-terminal domain 2 AM374_RS10970 PF17941 Polyphosphate kinase C-terminal domain 1 AM374_RS10970 PF13089 Polyphosphate kinase N-terminal domain AM374_RS10975 PF02541 Ppx/GppA phosphatase family AM374_RS10980 PF05231 MASE1 AM374_RS10980 PF00563 EAL domain AM374_RS10990 PF11119 Protein of unknown function (DUF2633) AM374_RS10995 PF05433 Glycine zipper 2TM domain AM374_RS11000 PF17358 Family of unknown function (DUF5384) AM374_RS11060 PF02371 Transposase IS116/IS110/IS902 family AM374_RS11060 PF01548 Transposase AM374_RS11075 PF02540 NAD synthase AM374_RS11075 PF00958 GMP synthase C terminal domain AM374_RS11075 PF00117 Glutamine amidotransferase class-I AM374_RS11080 PF00571 CBS domain AM374_RS11080 PF00478 IMP dehydrogenase / GMP reductase domain AM374_RS11085 PF13742 OB-fold nucleic acid binding domain AM374_RS11085 PF02601 Exonuclease VII, large subunit AM374_RS11090 PF03797 Autotransporter beta-domain AM374_RS11110 PF02368 Bacterial Ig-like domain (group 2) AM374_RS11110 PF11924 Inverse autotransporter, beta-domain AM374_RS11110 PF01476 LysM domain AM374_RS11110 PF07979 Intimin C-type lectin domain AM374_RS11110 PF02369 Bacterial Ig-like domain (group 1) AM374_RS11115 PF07191 zinc-ribbons AM374_RS11120 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM374_RS11120 PF01926 50S ribosome-binding GTPase AM374_RS11125 PF13360 PQQ-like domain AM374_RS11130 PF09976 Tetratricopeptide repeat-like domain AM374_RS11135 PF03129 Anticodon binding domain AM374_RS11135 PF13393 Histidyl-tRNA synthetase AM374_RS11140 PF04551 GcpE protein AM374_RS11145 PF13464 Domain of unknown function (DUF4115) AM374_RS11155 PF04055 Radical SAM superfamily AM374_RS11160 PF00334 Nucleoside diphosphate kinase AM374_RS11175 PF13247 4Fe-4S dicluster domain AM374_RS11175 PF12800 4Fe-4S binding domain AM374_RS11180 PF01568 Molydopterin dinucleotide binding domain AM374_RS11180 PF00384 Molybdopterin oxidoreductase AM374_RS11180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS11185 PF00912 Transglycosylase AM374_RS11185 PF00905 Penicillin binding protein transpeptidase domain AM374_RS11185 PF06832 Penicillin-Binding Protein C-terminus Family AM374_RS11190 PF07678 A-macroglobulin TED domain AM374_RS11190 PF00207 Alpha-2-macroglobulin family AM374_RS11190 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AM374_RS11190 PF17962 Bacterial macroglobulin domain 6 AM374_RS11190 PF01835 MG2 domain AM374_RS11190 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AM374_RS11190 PF07703 Alpha-2-macroglobulin bait region domain AM374_RS11190 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AM374_RS11190 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AM374_RS11195 PF00581 Rhodanese-like domain AM374_RS11215 PF14581 SseB protein C-terminal domain AM374_RS11215 PF07179 SseB protein N-terminal domain AM374_RS11225 PF00883 Cytosol aminopeptidase family, catalytic domain AM374_RS11225 PF12404 Peptidase AM374_RS11230 PF04384 Iron-sulphur cluster assembly AM374_RS11235 PF00111 2Fe-2S iron-sulfur cluster binding domain AM374_RS11240 PF00012 Hsp70 protein AM374_RS11245 PF07743 HSCB C-terminal oligomerisation domain AM374_RS11250 PF01521 Iron-sulphur cluster biosynthesis AM374_RS11255 PF01592 NifU-like N terminal domain AM374_RS11260 PF00266 Aminotransferase class-V AM374_RS11265 PF02082 Transcriptional regulator AM374_RS11270 PF00588 SpoU rRNA Methylase family AM374_RS11275 PF00459 Inositol monophosphatase family AM374_RS11280 PF12146 Serine aminopeptidase, S33 AM374_RS11285 PF17179 4Fe-4S dicluster domain AM374_RS11290 PF00175 Oxidoreductase NAD-binding domain AM374_RS11290 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AM374_RS11295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM374_RS11295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM374_RS11295 PF13187 4Fe-4S dicluster domain AM374_RS11300 PF03824 High-affinity nickel-transport protein AM374_RS11310 PF00874 PRD domain AM374_RS11315 PF12832 MFS_1 like family AM374_RS11320 PF00464 Serine hydroxymethyltransferase AM374_RS11325 PF00970 Oxidoreductase FAD-binding domain AM374_RS11325 PF00175 Oxidoreductase NAD-binding domain AM374_RS11325 PF00042 Globin AM374_RS11330 PF18500 CadC C-terminal domain 1 AM374_RS11330 PF00486 Transcriptional regulatory protein, C terminal AM374_RS11335 PF13520 Amino acid permease AM374_RS11340 PF01276 Orn/Lys/Arg decarboxylase, major domain AM374_RS11340 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM374_RS11340 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM374_RS11345 PF00854 POT family AM374_RS11350 PF00543 Nitrogen regulatory protein P-II AM374_RS11355 PF00158 Sigma-54 interaction domain AM374_RS11355 PF00072 Response regulator receiver domain AM374_RS11360 PF13942 YfhG lipoprotein AM374_RS11365 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS11370 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM374_RS11370 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM374_RS11370 PF02769 AIR synthase related protein, C-terminal domain AM374_RS11380 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM374_RS11380 PF01464 Transglycosylase SLT domain AM374_RS11385 PF14437 MafB19-like deaminase AM374_RS11395 PF00367 phosphotransferase system, EIIB AM374_RS11395 PF02378 Phosphotransferase system, EIIC AM374_RS11400 PF01380 SIS domain AM374_RS11405 PF01418 Helix-turn-helix domain, rpiR family AM374_RS11405 PF01380 SIS domain AM374_RS11410 PF02558 Ketopantoate reductase PanE/ApbA AM374_RS11410 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM374_RS11415 PF07690 Major Facilitator Superfamily AM374_RS11420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS11420 PF03466 LysR substrate binding domain AM374_RS11425 PF12838 4Fe-4S dicluster domain AM374_RS11430 PF01648 4'-phosphopantetheinyl transferase superfamily AM374_RS11435 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM374_RS11440 PF11967 Recombination protein O N terminal AM374_RS11440 PF02565 Recombination protein O C terminal AM374_RS11445 PF07650 KH domain AM374_RS11445 PF01926 50S ribosome-binding GTPase AM374_RS11450 PF00035 Double-stranded RNA binding motif AM374_RS11450 PF14622 Ribonuclease-III-like AM374_RS11460 PF10502 Signal peptidase, peptidase S26 AM374_RS11465 PF00679 Elongation factor G C-terminus AM374_RS11465 PF00009 Elongation factor Tu GTP binding domain AM374_RS11465 PF03144 Elongation factor Tu domain 2 AM374_RS11465 PF06421 GTP-binding protein LepA C-terminus AM374_RS11480 PF17188 MucB/RseB C-terminal domain AM374_RS11480 PF03888 MucB/RseB N-terminal domain AM374_RS11485 PF03872 Anti sigma-E protein RseA, N-terminal domain AM374_RS11485 PF03873 Anti sigma-E protein RseA, C-terminal domain AM374_RS11490 PF04542 Sigma-70 region 2 AM374_RS11490 PF08281 Sigma-70, region 4 AM374_RS11500 PF02910 Fumarate reductase flavoprotein C-term AM374_RS11500 PF00890 FAD binding domain AM374_RS11505 PF05175 Methyltransferase small domain AM374_RS11510 PF00270 DEAD/DEAH box helicase AM374_RS11510 PF00271 Helicase conserved C-terminal domain AM374_RS11515 PF03466 LysR substrate binding domain AM374_RS11515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS11520 PF01810 LysE type translocator AM374_RS11525 PF01228 Glycine radical AM374_RS11530 PF03167 Uracil DNA glycosylase superfamily AM374_RS11535 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM374_RS11535 PF00588 SpoU rRNA Methylase family AM374_RS11540 PF00085 Thioredoxin AM374_RS11545 PF03942 DTW domain AM374_RS11550 PF13380 CoA binding domain AM374_RS11550 PF13607 Succinyl-CoA ligase like flavodoxin domain AM374_RS11550 PF00583 Acetyltransferase (GNAT) family AM374_RS11555 PF13091 PLD-like domain AM374_RS11560 PF10043 Predicted periplasmic lipoprotein (DUF2279) AM374_RS11565 PF00083 Sugar (and other) transporter AM374_RS11600 PF17871 AAA lid domain AM374_RS11600 PF02861 Clp amino terminal domain, pathogenicity island component AM374_RS11600 PF10431 C-terminal, D2-small domain, of ClpB protein AM374_RS11600 PF00004 ATPase family associated with various cellular activities (AAA) AM374_RS11600 PF07724 AAA domain (Cdc48 subfamily) AM374_RS11605 PF02578 Multi-copper polyphenol oxidoreductase laccase AM374_RS11610 PF00849 RNA pseudouridylate synthase AM374_RS11610 PF01479 S4 domain AM374_RS11615 PF13525 Outer membrane lipoprotein AM374_RS11620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM374_RS11630 PF00800 Prephenate dehydratase AM374_RS11630 PF01817 Chorismate mutase type II AM374_RS11635 PF08450 SMP-30/Gluconolactonase/LRE-like region AM374_RS11640 PF02153 Prephenate dehydrogenase AM374_RS11640 PF01817 Chorismate mutase type II AM374_RS11645 PF00793 DAHP synthetase I family AM374_RS11650 PF13689 YfiR/HmsC-like AM374_RS11655 PF17152 Periplasmic sensor domain AM374_RS11655 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS11660 PF01245 Ribosomal protein L19 AM374_RS11665 PF01746 tRNA (Guanine-1)-methyltransferase AM374_RS11670 PF05239 PRC-barrel domain AM374_RS11670 PF01782 RimM N-terminal domain AM374_RS11675 PF00886 Ribosomal protein S16 AM374_RS11680 PF00448 SRP54-type protein, GTPase domain AM374_RS11680 PF02978 Signal peptide binding domain AM374_RS11680 PF02881 SRP54-type protein, helical bundle domain AM374_RS11685 PF01578 Cytochrome C assembly protein AM374_RS11690 PF01595 Cyclin M transmembrane N-terminal domain AM374_RS11690 PF03471 Transporter associated domain AM374_RS11690 PF00571 CBS domain AM374_RS11700 PF01025 GrpE AM374_RS11710 PF01513 ATP-NAD kinase AM374_RS11715 PF02463 RecF/RecN/SMC N terminal domain AM374_RS11720 PF04355 SmpA / OmlA family AM374_RS11725 PF03658 RnfH family Ubiquitin AM374_RS11730 PF03364 Polyketide cyclase / dehydrase and lipid transport AM374_RS11735 PF01668 SmpB protein AM374_RS11750 PF00005 ABC transporter AM374_RS11750 PF00664 ABC transporter transmembrane region AM374_RS11755 PF00529 HlyD membrane-fusion protein of T1SS AM374_RS11755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM374_RS11770 PF04606 Ogr/Delta-like zinc finger AM374_RS11805 PF17482 Phage tail sheath C-terminal domain AM374_RS11805 PF04984 Phage tail sheath protein subtilisin-like domain AM374_RS11810 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM374_RS11815 PF07484 Phage Tail Collar Domain AM374_RS11925 PF06183 DinI-like family AM374_RS11935 PF05840 Bacteriophage replication gene A protein (GPA) AM374_RS11940 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM374_RS11945 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM374_RS11955 PF17282 Family of unknown function (DUF5347) AM374_RS11965 PF06892 Phage regulatory protein CII (CP76) AM374_RS11975 PF07022 Bacteriophage CI repressor helix-turn-helix domain AM374_RS11975 PF16452 Bacteriophage CI repressor C-terminal domain AM374_RS11980 PF02899 Phage integrase, N-terminal SAM-like domain AM374_RS11980 PF00589 Phage integrase family AM374_RS12025 PF06722 Protein of unknown function (DUF1205) AM374_RS12030 PF00005 ABC transporter AM374_RS12030 PF00664 ABC transporter transmembrane region AM374_RS12040 PF00756 Putative esterase AM374_RS12045 PF00593 TonB dependent receptor AM374_RS12045 PF07715 TonB-dependent Receptor Plug Domain AM374_RS12055 PF00805 Pentapeptide repeats (8 copies) AM374_RS12060 PF04393 Protein of unknown function (DUF535) AM374_RS12075 PF03824 High-affinity nickel-transport protein AM374_RS12080 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS12085 PF00486 Transcriptional regulatory protein, C terminal AM374_RS12085 PF00072 Response regulator receiver domain AM374_RS12100 PF01970 Tripartite tricarboxylate transporter TctA family AM374_RS12105 PF08943 CsiD AM374_RS12110 PF01266 FAD dependent oxidoreductase AM374_RS12115 PF00171 Aldehyde dehydrogenase family AM374_RS12120 PF00202 Aminotransferase class-III AM374_RS12125 PF00324 Amino acid permease AM374_RS12130 PF07729 FCD domain AM374_RS12130 PF00392 Bacterial regulatory proteins, gntR family AM374_RS12135 PF04972 BON domain AM374_RS12135 PF01476 LysM domain AM374_RS12145 PF01679 Proteolipid membrane potential modulator AM374_RS12150 PF01022 Bacterial regulatory protein, arsR family AM374_RS12155 PF00581 Rhodanese-like domain AM374_RS12155 PF11127 Protein of unknown function (DUF2892) AM374_RS12165 PF00816 H-NS histone family AM374_RS12175 PF06610 L-alanine exporter AM374_RS12180 PF09400 Protein of unknown function (DUF2002) AM374_RS12185 PF05957 Bacterial protein of unknown function (DUF883) AM374_RS12190 PF00392 Bacterial regulatory proteins, gntR family AM374_RS12190 PF00155 Aminotransferase class I and II AM374_RS12195 PF02627 Carboxymuconolactone decarboxylase family AM374_RS12205 PF00462 Glutaredoxin AM374_RS12210 PF07972 NrdI Flavodoxin like AM374_RS12215 PF08343 Ribonucleotide reductase N-terminal AM374_RS12215 PF02867 Ribonucleotide reductase, barrel domain AM374_RS12215 PF00317 Ribonucleotide reductase, all-alpha domain AM374_RS12220 PF00268 Ribonucleotide reductase, small chain AM374_RS12230 PF00571 CBS domain AM374_RS12230 PF00005 ABC transporter AM374_RS12235 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS12240 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM374_RS12245 PF07690 Major Facilitator Superfamily AM374_RS12250 PF01047 MarR family AM374_RS12255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM374_RS12255 PF00529 HlyD membrane-fusion protein of T1SS AM374_RS12260 PF07690 Major Facilitator Superfamily AM374_RS12270 PF02664 S-Ribosylhomocysteinase (LuxS) AM374_RS12275 PF04262 Glutamate-cysteine ligase AM374_RS12280 PF09335 SNARE associated Golgi protein AM374_RS12285 PF13419 Haloacid dehalogenase-like hydrolase AM374_RS12320 PF02599 Global regulator protein family AM374_RS12325 PF02272 DHHA1 domain AM374_RS12325 PF01411 tRNA synthetases class II (A) AM374_RS12325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM374_RS12335 PF02631 RecX family AM374_RS12340 PF00154 recA bacterial DNA recombination protein AM374_RS12345 PF02464 Competence-damaged protein AM374_RS12355 PF13406 Transglycosylase SLT domain AM374_RS12360 PF03608 PTS system enzyme II sorbitol-specific factor AM374_RS12365 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AM374_RS12365 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AM374_RS12370 PF03829 PTS system glucitol/sorbitol-specific IIA component AM374_RS12375 PF00106 short chain dehydrogenase AM374_RS12380 PF06923 Glucitol operon activator protein (GutM) AM374_RS12385 PF00455 DeoR C terminal sensor domain AM374_RS12385 PF08220 DeoR-like helix-turn-helix domain AM374_RS12390 PF00571 CBS domain AM374_RS12390 PF01380 SIS domain AM374_RS12395 PF01590 GAF domain AM374_RS12395 PF00158 Sigma-54 interaction domain AM374_RS12400 PF00301 Rubredoxin AM374_RS12400 PF00753 Metallo-beta-lactamase superfamily AM374_RS12400 PF00258 Flavodoxin AM374_RS12405 PF18113 Rubredoxin binding C-terminal domain AM374_RS12405 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS12410 PF01300 Telomere recombination AM374_RS12410 PF17788 HypF Kae1-like domain AM374_RS12410 PF07503 HypF finger AM374_RS12410 PF00708 Acylphosphatase AM374_RS12415 PF12800 4Fe-4S binding domain AM374_RS12415 PF13247 4Fe-4S dicluster domain AM374_RS12425 PF01750 Hydrogenase maturation protease AM374_RS12430 PF07450 Formate hydrogenlyase maturation protein HycH AM374_RS12435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM374_RS12440 PF12838 4Fe-4S dicluster domain AM374_RS12445 PF00374 Nickel-dependent hydrogenase AM374_RS12445 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM374_RS12445 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM374_RS12450 PF00146 NADH dehydrogenase AM374_RS12455 PF00361 Proton-conducting membrane transporter AM374_RS12460 PF13247 4Fe-4S dicluster domain AM374_RS12465 PF11046 Transcriptional repressor of hyc and hyp operons AM374_RS12475 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM374_RS12480 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM374_RS12485 PF01455 HupF/HypC family AM374_RS12490 PF01924 Hydrogenase formation hypA family AM374_RS12495 PF02769 AIR synthase related protein, C-terminal domain AM374_RS12495 PF00586 AIR synthase related protein, N-terminal domain AM374_RS12500 PF02954 Bacterial regulatory protein, Fis family AM374_RS12500 PF01590 GAF domain AM374_RS12500 PF00158 Sigma-54 interaction domain AM374_RS12505 PF11756 Nitrous oxide-stimulated promoter AM374_RS12510 PF01297 Zinc-uptake complex component A periplasmic AM374_RS12515 PF00005 ABC transporter AM374_RS12520 PF00950 ABC 3 transport family AM374_RS12525 PF00950 ABC 3 transport family AM374_RS12530 PF03421 YopJ Serine/Threonine acetyltransferase AM374_RS12540 PF12833 Helix-turn-helix domain AM374_RS12555 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) AM374_RS12560 PF01514 Secretory protein of YscJ/FliF family AM374_RS12570 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AM374_RS12575 PF09480 Type III secretion system protein PrgH-EprH (PrgH) AM374_RS12580 PF12833 Helix-turn-helix domain AM374_RS12585 PF00486 Transcriptional regulatory protein, C terminal AM374_RS12590 PF01464 Transglycosylase SLT domain AM374_RS12595 PF03545 Yersinia virulence determinant (YopE) AM374_RS12595 PF09119 SicP binding AM374_RS12595 PF00102 Protein-tyrosine phosphatase AM374_RS12600 PF05932 Tir chaperone protein (CesT) family AM374_RS12610 PF00550 Phosphopantetheine attachment site AM374_RS12615 PF09052 SipA N-terminal domain AM374_RS12620 PF06511 Type III secretion systems tip complex components AM374_RS12625 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) AM374_RS12630 PF04888 Secretion system effector C (SseC) like family AM374_RS12630 PF16535 Type III cell invasion protein SipB AM374_RS12635 PF07720 Tetratricopeptide repeat AM374_RS12640 PF01312 FlhB HrpN YscU SpaS Family AM374_RS12645 PF01311 Bacterial export proteins, family 1 AM374_RS12650 PF01313 Bacterial export proteins, family 3 AM374_RS12655 PF00813 FliP family AM374_RS12660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM374_RS12665 PF02510 Surface presentation of antigens protein AM374_RS12670 PF02090 Salmonella surface presentation of antigen gene type M protein AM374_RS12675 PF18269 T3SS EscN ATPase C-terminal domain AM374_RS12675 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM374_RS12675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM374_RS12680 PF03519 Invasion protein B family AM374_RS12685 PF00771 FHIPEP family AM374_RS12690 PF07201 HrpJ-like domain AM374_RS12695 PF00263 Bacterial type II and III secretion system protein AM374_RS12695 PF03958 Bacterial type II/III secretion system short domain AM374_RS12700 PF12833 Helix-turn-helix domain AM374_RS12705 PF04741 InvH outer membrane lipoprotein AM374_RS12740 PF00149 Calcineurin-like phosphoesterase AM374_RS12765 PF05190 MutS family domain IV AM374_RS12765 PF05192 MutS domain III AM374_RS12765 PF00488 MutS domain V AM374_RS12765 PF05188 MutS domain II AM374_RS12765 PF01624 MutS domain I AM374_RS12775 PF07690 Major Facilitator Superfamily AM374_RS12780 PF03466 LysR substrate binding domain AM374_RS12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS12785 PF02447 GntP family permease AM374_RS12790 PF01370 NAD dependent epimerase/dehydratase family AM374_RS12795 PF01261 Xylose isomerase-like TIM barrel AM374_RS12800 PF00596 Class II Aldolase and Adducin N-terminal domain AM374_RS12805 PF07005 Sugar-binding N-terminal domain AM374_RS12805 PF17042 Nucleotide-binding C-terminal domain AM374_RS12810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM374_RS12810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM374_RS12815 PF08220 DeoR-like helix-turn-helix domain AM374_RS12815 PF00455 DeoR C terminal sensor domain AM374_RS12820 PF01047 MarR family AM374_RS12825 PF02441 Flavoprotein AM374_RS12830 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM374_RS12840 PF00140 Sigma-70 factor, region 1.2 AM374_RS12840 PF04542 Sigma-70 region 2 AM374_RS12840 PF04539 Sigma-70 region 3 AM374_RS12840 PF04545 Sigma-70, region 4 AM374_RS12845 PF01476 LysM domain AM374_RS12845 PF01551 Peptidase family M23 AM374_RS12855 PF01975 Survival protein SurE AM374_RS12860 PF01142 tRNA pseudouridine synthase D (TruD) AM374_RS12865 PF02542 YgbB family AM374_RS12870 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM374_RS12875 PF04977 Septum formation initiator AM374_RS12880 PF12084 Protein of unknown function (DUF3561) AM374_RS12890 PF00009 Elongation factor Tu GTP binding domain AM374_RS12895 PF01507 Phosphoadenosine phosphosulfate reductase family AM374_RS12900 PF04389 Peptidase family M28 AM374_RS12905 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) AM374_RS12910 PF01867 CRISPR associated protein Cas1 AM374_RS12920 PF09704 CRISPR-associated protein (Cas_Cas5) AM374_RS12925 PF09344 CT1975-like protein AM374_RS12940 PF00271 Helicase conserved C-terminal domain AM374_RS12940 PF18019 HD domain AM374_RS12940 PF00270 DEAD/DEAH box helicase AM374_RS12945 PF11047 Salmonella outer protein D AM374_RS12950 PF01507 Phosphoadenosine phosphosulfate reductase family AM374_RS12960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM374_RS12960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM374_RS12965 PF00175 Oxidoreductase NAD-binding domain AM374_RS12965 PF00258 Flavodoxin AM374_RS12965 PF00667 FAD binding domain AM374_RS12975 PF01242 6-pyruvoyl tetrahydropterin synthase AM374_RS12980 PF12706 Beta-lactamase superfamily domain AM374_RS12980 PF03099 Biotin/lipoate A/B protein ligase family AM374_RS12985 PF04055 Radical SAM superfamily AM374_RS12990 PF03952 Enolase, N-terminal domain AM374_RS12990 PF00113 Enolase, C-terminal TIM barrel domain AM374_RS12995 PF06418 CTP synthase N-terminus AM374_RS12995 PF00117 Glutamine amidotransferase class-I AM374_RS13000 PF03819 MazG nucleotide pyrophosphohydrolase domain AM374_RS13005 PF00419 Fimbrial protein AM374_RS13010 PF00577 Outer membrane usher protein AM374_RS13010 PF13954 PapC N-terminal domain AM374_RS13010 PF13953 PapC C-terminal domain AM374_RS13015 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS13015 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS13020 PF00419 Fimbrial protein AM374_RS13030 PF00419 Fimbrial protein AM374_RS13055 PF04607 Region found in RelA / SpoT proteins AM374_RS13055 PF13291 ACT domain AM374_RS13055 PF02824 TGS domain AM374_RS13060 PF05958 tRNA (Uracil-5-)-methyltransferase AM374_RS13060 PF01938 TRAM domain AM374_RS13065 PF00672 HAMP domain AM374_RS13065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS13065 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS13065 PF01627 Hpt domain AM374_RS13065 PF00072 Response regulator receiver domain AM374_RS13065 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM374_RS13070 PF02595 Glycerate kinase family AM374_RS13075 PF13378 Enolase C-terminal domain-like AM374_RS13080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM374_RS13080 PF13378 Enolase C-terminal domain-like AM374_RS13085 PF07690 Major Facilitator Superfamily AM374_RS13095 PF00258 Flavodoxin AM374_RS13100 PF00849 RNA pseudouridylate synthase AM374_RS13105 PF04287 tRNA pseudouridine synthase C AM374_RS13115 PF07348 Syd protein (SUKH-2) AM374_RS13120 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM374_RS13120 PF14489 QueF-like protein AM374_RS13125 PF11892 Domain of unknown function (DUF3412) AM374_RS13125 PF03641 Possible lysine decarboxylase AM374_RS13125 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM374_RS13135 PF03315 Serine dehydratase beta chain AM374_RS13135 PF03313 Serine dehydratase alpha chain AM374_RS13145 PF01367 5'-3' exonuclease, C-terminal SAM fold AM374_RS13145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM374_RS13150 PF00465 Iron-containing alcohol dehydrogenase AM374_RS13155 PF00596 Class II Aldolase and Adducin N-terminal domain AM374_RS13160 PF07690 Major Facilitator Superfamily AM374_RS13165 PF07882 L-fucose isomerase, second N-terminal domain AM374_RS13165 PF02952 L-fucose isomerase, C-terminal domain AM374_RS13165 PF07881 L-fucose isomerase, first N-terminal domain AM374_RS13170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM374_RS13170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM374_RS13175 PF05025 RbsD / FucU transport protein family AM374_RS13180 PF08220 DeoR-like helix-turn-helix domain AM374_RS13180 PF00455 DeoR C terminal sensor domain AM374_RS13185 PF18125 RlmM ferredoxin-like domain AM374_RS13185 PF01728 FtsJ-like methyltransferase AM374_RS13190 PF04241 Protein of unknown function (DUF423) AM374_RS13195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS13195 PF03466 LysR substrate binding domain AM374_RS13200 PF06004 Bacterial protein of unknown function (DUF903) AM374_RS13205 PF00266 Aminotransferase class-V AM374_RS13210 PF02657 Fe-S metabolism associated domain AM374_RS13215 PF00892 EamA-like transporter family AM374_RS13220 PF00899 ThiF family AM374_RS13225 PF06725 3D domain AM374_RS13225 PF03562 MltA specific insert domain AM374_RS13240 PF01520 N-acetylmuramoyl-L-alanine amidase AM374_RS13240 PF11741 AMIN domain AM374_RS13245 PF00583 Acetyltransferase (GNAT) family AM374_RS13245 PF00696 Amino acid kinase family AM374_RS13250 PF13538 UvrD-like helicase C-terminal domain AM374_RS13255 PF12705 PD-(D/E)XK nuclease superfamily AM374_RS13255 PF13361 UvrD-like helicase C-terminal domain AM374_RS13255 PF00580 UvrD/REP helicase N-terminal domain AM374_RS13260 PF00675 Insulinase (Peptidase family M16) AM374_RS13260 PF16187 Middle or third domain of peptidase_M16 AM374_RS13260 PF05193 Peptidase M16 inactive domain AM374_RS13265 PF17946 RecC C-terminal domain AM374_RS13270 PF07963 Prokaryotic N-terminal methylation motif AM374_RS13270 PF12528 Type II secretion prepilin peptidase dependent protein C AM374_RS13275 PF10713 Protein of unknown function (DUF2509) AM374_RS13280 PF07963 Prokaryotic N-terminal methylation motif AM374_RS13285 PF07963 Prokaryotic N-terminal methylation motif AM374_RS13295 PF00303 Thymidylate synthase AM374_RS13300 PF01790 Prolipoprotein diacylglyceryl transferase AM374_RS13305 PF05524 PEP-utilising enzyme, N-terminal AM374_RS13305 PF00391 PEP-utilising enzyme, mobile domain AM374_RS13305 PF01590 GAF domain AM374_RS13305 PF02896 PEP-utilising enzyme, TIM barrel domain AM374_RS13310 PF00293 NUDIX domain AM374_RS13315 PF02976 DNA mismatch repair enzyme MutH AM374_RS13320 PF03741 Integral membrane protein TerC family AM374_RS13325 PF06004 Bacterial protein of unknown function (DUF903) AM374_RS13330 PF00248 Aldo/keto reductase family AM374_RS13335 PF07690 Major Facilitator Superfamily AM374_RS13340 PF00501 AMP-binding enzyme AM374_RS13340 PF01553 Acyltransferase AM374_RS13355 PF00356 Bacterial regulatory proteins, lacI family AM374_RS13360 PF00356 Bacterial regulatory proteins, lacI family AM374_RS13365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM374_RS13365 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM374_RS13370 PF03466 LysR substrate binding domain AM374_RS13370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS13375 PF01177 Asp/Glu/Hydantoin racemase AM374_RS13380 PF00083 Sugar (and other) transporter AM374_RS13390 PF04962 KduI/IolB family AM374_RS13400 PF02803 Thiolase, C-terminal domain AM374_RS13400 PF00108 Thiolase, N-terminal domain AM374_RS13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS13405 PF03466 LysR substrate binding domain AM374_RS13415 PF03222 Tryptophan/tyrosine permease family AM374_RS13420 PF02583 Metal-sensitive transcriptional repressor AM374_RS13425 PF03824 High-affinity nickel-transport protein AM374_RS13445 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS13445 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS13450 PF13953 PapC C-terminal domain AM374_RS13450 PF13954 PapC N-terminal domain AM374_RS13450 PF00577 Outer membrane usher protein AM374_RS13455 PF00419 Fimbrial protein AM374_RS13465 PF13505 Outer membrane protein beta-barrel domain AM374_RS13495 PF01476 LysM domain AM374_RS13495 PF01551 Peptidase family M23 AM374_RS13505 PF00293 NUDIX domain AM374_RS13510 PF00152 tRNA synthetases class II (D, K and N) AM374_RS13510 PF01336 OB-fold nucleic acid binding domain AM374_RS13520 PF01368 DHH family AM374_RS13520 PF17768 RecJ OB domain AM374_RS13520 PF02272 DHHA1 domain AM374_RS13525 PF13098 Thioredoxin-like domain AM374_RS13525 PF10411 Disulfide bond isomerase protein N-terminus AM374_RS13530 PF02899 Phage integrase, N-terminal SAM-like domain AM374_RS13530 PF00589 Phage integrase family AM374_RS13535 PF00258 Flavodoxin AM374_RS13540 PF07254 Membrane-bound toxin component of toxin-antitoxin system AM374_RS13545 PF03937 Flavinator of succinate dehydrogenase AM374_RS13555 PF01571 Aminomethyltransferase folate-binding domain AM374_RS13565 PF03006 Haemolysin-III related AM374_RS13570 PF04266 ASCH domain AM374_RS13575 PF00232 Glycosyl hydrolase family 1 AM374_RS13590 PF02347 Glycine cleavage system P-protein AM374_RS13595 PF01597 Glycine cleavage H-protein AM374_RS13600 PF01571 Aminomethyltransferase folate-binding domain AM374_RS13600 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM374_RS13605 PF01494 FAD binding domain AM374_RS13610 PF01494 FAD binding domain AM374_RS13615 PF00557 Metallopeptidase family M24 AM374_RS13615 PF05195 Aminopeptidase P, N-terminal domain AM374_RS13620 PF03695 Uncharacterised protein family (UPF0149) AM374_RS13625 PF05164 Cell division protein ZapA AM374_RS13635 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM374_RS13640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM374_RS13640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM374_RS13640 PF01842 ACT domain AM374_RS13645 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM374_RS13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS13650 PF03466 LysR substrate binding domain AM374_RS13660 PF04402 Protein of unknown function (DUF541) AM374_RS13665 PF01810 LysE type translocator AM374_RS13670 PF00924 Mechanosensitive ion channel AM374_RS13670 PF05552 Conserved TM helix AM374_RS13675 PF01116 Fructose-bisphosphate aldolase class-II AM374_RS13680 PF00162 Phosphoglycerate kinase AM374_RS13685 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM374_RS13685 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM374_RS13710 PF00005 ABC transporter AM374_RS13715 PF00005 ABC transporter AM374_RS13720 PF02780 Transketolase, C-terminal domain AM374_RS13720 PF02779 Transketolase, pyrimidine binding domain AM374_RS13720 PF00456 Transketolase, thiamine diphosphate binding domain AM374_RS13725 PF01435 Peptidase family M48 AM374_RS13735 PF00491 Arginase family AM374_RS13740 PF12697 Alpha/beta hydrolase family AM374_RS13745 PF04074 YhcH/YjgK/YiaL AM374_RS13750 PF02615 Malate/L-lactate dehydrogenase AM374_RS13755 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS13755 PF00107 Zinc-binding dehydrogenase AM374_RS13760 PF01232 Mannitol dehydrogenase Rossmann domain AM374_RS13760 PF08125 Mannitol dehydrogenase C-terminal domain AM374_RS13770 PF07729 FCD domain AM374_RS13770 PF00392 Bacterial regulatory proteins, gntR family AM374_RS13780 PF17810 Arginine decarboxylase helical bundle domain AM374_RS13780 PF17944 Arginine decarboxylase C-terminal helical extension AM374_RS13780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM374_RS13800 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM374_RS13800 PF02772 S-adenosylmethionine synthetase, central domain AM374_RS13800 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM374_RS13805 PF00083 Sugar (and other) transporter AM374_RS13810 PF17283 SprT-like zinc ribbon domain AM374_RS13810 PF10263 SprT-like family AM374_RS13815 PF04231 Endonuclease I AM374_RS13820 PF04452 RNA methyltransferase AM374_RS13825 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM374_RS13825 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM374_RS13830 PF02622 Uncharacterized ACR, COG1678 AM374_RS13835 PF03652 Holliday junction resolvase AM374_RS13845 PF00437 Type II/IV secretion system protein AM374_RS13850 PF01168 Alanine racemase, N-terminal domain AM374_RS13855 PF02325 YGGT family AM374_RS13860 PF02594 Uncharacterised ACR, YggU family COG1872 AM374_RS13865 PF01725 Ham1 family AM374_RS13870 PF06969 HemN C-terminal domain AM374_RS13870 PF04055 Radical SAM superfamily AM374_RS13875 PF06717 Protein of unknown function (DUF1202) AM374_RS13880 PF17763 Glutaminase/Asparaginase C-terminal domain AM374_RS13880 PF00710 Asparaginase, N-terminal AM374_RS13885 PF11101 Protein of unknown function (DUF2884) AM374_RS13890 PF04320 Protein with unknown function (DUF469) AM374_RS13895 PF02390 Putative methyltransferase AM374_RS13900 PF14815 NUDIX domain AM374_RS13900 PF00633 Helix-hairpin-helix motif AM374_RS13900 PF00730 HhH-GPD superfamily base excision DNA repair protein AM374_RS13905 PF04362 Bacterial Fe(2+) trafficking AM374_RS13910 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AM374_RS13910 PF01464 Transglycosylase SLT domain AM374_RS13915 PF03825 Nucleoside H+ symporter AM374_RS13920 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM374_RS13920 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM374_RS13920 PF01276 Orn/Lys/Arg decarboxylase, major domain AM374_RS13925 PF04474 Protein of unknown function (DUF554) AM374_RS13960 PF01320 Colicin immunity protein / pyocin immunity protein AM374_RS13970 PF01320 Colicin immunity protein / pyocin immunity protein AM374_RS14010 PF00196 Bacterial regulatory proteins, luxR family AM374_RS14020 PF13520 Amino acid permease AM374_RS14030 PF01266 FAD dependent oxidoreductase AM374_RS14035 PF00171 Aldehyde dehydrogenase family AM374_RS14040 PF04965 Gene 25-like lysozyme AM374_RS14050 PF01522 Polysaccharide deacetylase AM374_RS14060 PF07690 Major Facilitator Superfamily AM374_RS14065 PF03786 D-mannonate dehydratase (UxuA) AM374_RS14070 PF08125 Mannitol dehydrogenase C-terminal domain AM374_RS14070 PF01232 Mannitol dehydrogenase Rossmann domain AM374_RS14075 PF02614 Glucuronate isomerase AM374_RS14085 PF05257 CHAP domain AM374_RS14085 PF03738 Glutathionylspermidine synthase preATP-grasp AM374_RS14090 PF02798 Glutathione S-transferase, N-terminal domain AM374_RS14100 PF01497 Periplasmic binding protein AM374_RS14105 PF01455 HupF/HypC family AM374_RS14110 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM374_RS14115 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AM374_RS14120 PF01750 Hydrogenase maturation protease AM374_RS14125 PF00374 Nickel-dependent hydrogenase AM374_RS14130 PF03916 Polysulphide reductase, NrfD AM374_RS14135 PF13247 4Fe-4S dicluster domain AM374_RS14140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM374_RS14140 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM374_RS14150 PF11115 Protein of unknown function (DUF2623) AM374_RS14155 PF00672 HAMP domain AM374_RS14155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM374_RS14155 PF02203 Tar ligand binding domain homologue AM374_RS14160 PF03350 Uncharacterized protein family, UPF0114 AM374_RS14190 PF02472 Biopolymer transport protein ExbD/TolR AM374_RS14195 PF01618 MotA/TolQ/ExbB proton channel family AM374_RS14205 PF01053 Cys/Met metabolism PLP-dependent enzyme AM374_RS14210 PF09335 SNARE associated Golgi protein AM374_RS14215 PF06719 AraC-type transcriptional regulator N-terminus AM374_RS14215 PF12833 Helix-turn-helix domain AM374_RS14220 PF00465 Iron-containing alcohol dehydrogenase AM374_RS14225 PF00248 Aldo/keto reductase family AM374_RS14230 PF00939 Sodium:sulfate symporter transmembrane region AM374_RS14245 PF11842 Domain of unknown function (DUF3362) AM374_RS14245 PF08497 Radical SAM N-terminal AM374_RS14245 PF04055 Radical SAM superfamily AM374_RS14250 PF03480 Bacterial extracellular solute-binding protein, family 7 AM374_RS14260 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM374_RS14265 PF00394 Multicopper oxidase AM374_RS14265 PF07731 Multicopper oxidase AM374_RS14265 PF07732 Multicopper oxidase AM374_RS14270 PF01553 Acyltransferase AM374_RS14275 PF00521 DNA gyrase/topoisomerase IV, subunit A AM374_RS14275 PF03989 DNA gyrase C-terminal domain, beta-propeller AM374_RS14280 PF06445 GyrI-like small molecule binding domain AM374_RS14285 PF04076 Bacterial OB fold (BOF) protein AM374_RS14290 PF00072 Response regulator receiver domain AM374_RS14290 PF00486 Transcriptional regulatory protein, C terminal AM374_RS14295 PF08521 Two-component sensor kinase N-terminal AM374_RS14295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS14295 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS14300 PF02525 Flavodoxin-like fold AM374_RS14305 PF03992 Antibiotic biosynthesis monooxygenase AM374_RS14310 PF00204 DNA gyrase B AM374_RS14310 PF00986 DNA gyrase B subunit, carboxyl terminus AM374_RS14310 PF01751 Toprim domain AM374_RS14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS14315 PF05728 Uncharacterised protein family (UPF0227) AM374_RS14320 PF00149 Calcineurin-like phosphoesterase AM374_RS14325 PF06853 Protein of unknown function (DUF1249) AM374_RS14330 PF00293 NUDIX domain AM374_RS14335 PF02321 Outer membrane efflux protein AM374_RS14345 PF06693 Protein of unknown function (DUF1190) AM374_RS14350 PF03738 Glutathionylspermidine synthase preATP-grasp AM374_RS14355 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM374_RS14360 PF02535 ZIP Zinc transporter AM374_RS14370 PF17425 Arylsulfotransferase Ig-like domain AM374_RS14370 PF05935 Arylsulfotransferase (ASST) AM374_RS14375 PF01323 DSBA-like thioredoxin domain AM374_RS14380 PF02600 Disulfide bond formation protein DsbB AM374_RS14385 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM374_RS14390 PF04380 Membrane fusogenic activity AM374_RS14395 PF08971 Glycogen synthesis protein AM374_RS14400 PF07290 Protein of unknown function (DUF1449) AM374_RS14405 PF15975 Flotillin AM374_RS14405 PF01145 SPFH domain / Band 7 family AM374_RS14415 PF00294 pfkB family carbohydrate kinase AM374_RS14415 PF01467 Cytidylyltransferase-like AM374_RS14420 PF03710 Glutamate-ammonia ligase adenylyltransferase AM374_RS14420 PF08335 GlnD PII-uridylyltransferase AM374_RS14425 PF01928 CYTH domain AM374_RS14435 PF08239 Bacterial SH3 domain AM374_RS14440 PF12627 Probable RNA and SrmB- binding site of polymerase A AM374_RS14440 PF01966 HD domain AM374_RS14440 PF01743 Poly A polymerase head domain AM374_RS14445 PF02673 Bacitracin resistance protein BacA AM374_RS14450 PF02152 Dihydroneopterin aldolase AM374_RS14455 PF02660 Glycerol-3-phosphate acyltransferase AM374_RS14460 PF05681 Fumarate hydratase (Fumerase) AM374_RS14465 PF00814 Glycoprotease family AM374_RS14470 PF01165 Ribosomal protein S21 AM374_RS14475 PF01807 CHC2 zinc finger AM374_RS14475 PF08275 DNA primase catalytic core, N-terminal domain AM374_RS14475 PF10410 DnaB-helicase binding domain of primase AM374_RS14475 PF08278 DNA primase DnaG DnaB-binding AM374_RS14480 PF04546 Sigma-70, non-essential region AM374_RS14480 PF00140 Sigma-70 factor, region 1.2 AM374_RS14480 PF03979 Sigma-70 factor, region 1.1 AM374_RS14480 PF04542 Sigma-70 region 2 AM374_RS14480 PF04539 Sigma-70 region 3 AM374_RS14480 PF04545 Sigma-70, region 4 AM374_RS14485 PF03167 Uracil DNA glycosylase superfamily AM374_RS14495 PF04606 Ogr/Delta-like zinc finger AM374_RS14540 PF07484 Phage Tail Collar Domain AM374_RS14540 PF08400 Prophage tail fibre N-terminal AM374_RS14540 PF03335 Phage tail fibre repeat AM374_RS14650 PF06183 DinI-like family AM374_RS14655 PF05840 Bacteriophage replication gene A protein (GPA) AM374_RS14680 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM374_RS14700 PF06892 Phage regulatory protein CII (CP76) AM374_RS14715 PF02899 Phage integrase, N-terminal SAM-like domain AM374_RS14715 PF00589 Phage integrase family AM374_RS14730 PF03354 Phage Terminase AM374_RS14835 PF04954 Siderophore-interacting protein AM374_RS14835 PF08021 Siderophore-interacting FAD-binding domain AM374_RS14840 PF03551 Transcriptional regulator PadR-like family AM374_RS14850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM374_RS14850 PF08447 PAS fold AM374_RS14860 PF00202 Aminotransferase class-III AM374_RS14865 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS14865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM374_RS14870 PF05175 Methyltransferase small domain AM374_RS14875 PF01863 Protein of unknown function DUF45 AM374_RS14880 PF02698 DUF218 domain AM374_RS14885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM374_RS14890 PF03741 Integral membrane protein TerC family AM374_RS14895 PF00375 Sodium:dicarboxylate symporter family AM374_RS14905 PF09335 SNARE associated Golgi protein AM374_RS14910 PF13721 SecD export protein N-terminal TM region AM374_RS14915 PF06476 Protein of unknown function (DUF1090) AM374_RS14920 PF05957 Bacterial protein of unknown function (DUF883) AM374_RS14925 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AM374_RS14930 PF13997 YqjK-like protein AM374_RS14935 PF07681 DoxX AM374_RS14940 PF13409 Glutathione S-transferase, N-terminal domain AM374_RS14945 PF05656 Protein of unknown function (DUF805) AM374_RS14950 PF03466 LysR substrate binding domain AM374_RS14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS14955 PF02678 Pirin AM374_RS14955 PF17954 Quercetinase C-terminal cupin domain AM374_RS14965 PF03313 Serine dehydratase alpha chain AM374_RS14975 PF03315 Serine dehydratase beta chain AM374_RS14975 PF03313 Serine dehydratase alpha chain AM374_RS14980 PF01228 Glycine radical AM374_RS14980 PF02901 Pyruvate formate lyase-like AM374_RS14985 PF00871 Acetokinase family AM374_RS14990 PF03222 Tryptophan/tyrosine permease family AM374_RS14995 PF00291 Pyridoxal-phosphate dependent enzyme AM374_RS15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS15000 PF03466 LysR substrate binding domain AM374_RS15035 PF02595 Glycerate kinase family AM374_RS15040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM374_RS15040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM374_RS15045 PF03328 HpcH/HpaI aldolase/citrate lyase family AM374_RS15050 PF08666 SAF domain AM374_RS15050 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM374_RS15055 PF01116 Fructose-bisphosphate aldolase class-II AM374_RS15060 PF08013 Tagatose 6 phosphate kinase AM374_RS15065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM374_RS15070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM374_RS15075 PF03611 PTS system sugar-specific permease component AM374_RS15080 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS15080 PF00107 Zinc-binding dehydrogenase AM374_RS15085 PF08220 DeoR-like helix-turn-helix domain AM374_RS15090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM374_RS15095 PF04348 LppC putative lipoprotein AM374_RS15100 PF02021 Uncharacterised protein family UPF0102 AM374_RS15105 PF13580 SIS domain AM374_RS15110 PF04972 BON domain AM374_RS15115 PF13460 NAD(P)H-binding AM374_RS15120 PF01965 DJ-1/PfpI family AM374_RS15130 PF01541 GIY-YIG catalytic domain AM374_RS15135 PF13508 Acetyltransferase (GNAT) domain AM374_RS15140 PF02036 SCP-2 sterol transfer family AM374_RS15145 PF01136 Peptidase family U32 AM374_RS15150 PF01136 Peptidase family U32 AM374_RS15155 PF00296 Luciferase-like monooxygenase AM374_RS15160 PF03222 Tryptophan/tyrosine permease family AM374_RS15165 PF03880 DbpA RNA binding domain AM374_RS15165 PF00271 Helicase conserved C-terminal domain AM374_RS15165 PF00270 DEAD/DEAH box helicase AM374_RS15165 PF12343 Cold shock protein DEAD box A AM374_RS15170 PF13181 Tetratricopeptide repeat AM374_RS15170 PF07719 Tetratricopeptide repeat AM374_RS15175 PF00575 S1 RNA binding domain AM374_RS15175 PF03725 3' exoribonuclease family, domain 2 AM374_RS15175 PF00013 KH domain AM374_RS15175 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM374_RS15175 PF01138 3' exoribonuclease family, domain 1 AM374_RS15180 PF00312 Ribosomal protein S15 AM374_RS15185 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM374_RS15185 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM374_RS15185 PF09157 Pseudouridine synthase II TruB, C-terminal AM374_RS15190 PF02033 Ribosome-binding factor A AM374_RS15195 PF08364 Bacterial translation initiation factor IF-2 associated region AM374_RS15195 PF04760 Translation initiation factor IF-2, N-terminal region AM374_RS15195 PF11987 Translation-initiation factor 2 AM374_RS15195 PF00009 Elongation factor Tu GTP binding domain AM374_RS15200 PF08529 NusA N-terminal domain AM374_RS15200 PF13184 NusA-like KH domain AM374_RS15205 PF02576 RimP N-terminal domain AM374_RS15205 PF17384 RimP C-terminal SH3 domain AM374_RS15215 PF00764 Arginosuccinate synthase AM374_RS15230 PF03840 Preprotein translocase SecG subunit AM374_RS15235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM374_RS15235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM374_RS15235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM374_RS15235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM374_RS15240 PF00809 Pterin binding enzyme AM374_RS15245 PF00004 ATPase family associated with various cellular activities (AAA) AM374_RS15245 PF01434 Peptidase family M41 AM374_RS15245 PF06480 FtsH Extracellular AM374_RS15245 PF17862 AAA+ lid domain AM374_RS15255 PF01728 FtsJ-like methyltransferase AM374_RS15260 PF01985 CRS1 / YhbY (CRM) domain AM374_RS15265 PF01272 Transcription elongation factor, GreA/GreB, C-term AM374_RS15265 PF03449 Transcription elongation factor, N-terminal AM374_RS15270 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM374_RS15275 PF01018 GTP1/OBG AM374_RS15275 PF01926 50S ribosome-binding GTPase AM374_RS15280 PF00892 EamA-like transporter family AM374_RS15285 PF01016 Ribosomal L27 protein AM374_RS15290 PF00829 Ribosomal prokaryotic L21 protein AM374_RS15295 PF00348 Polyprenyl synthetase AM374_RS15300 PF13693 Winged helix-turn-helix DNA-binding AM374_RS15305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM374_RS15310 PF01722 BolA-like protein AM374_RS15315 PF13466 STAS domain AM374_RS15320 PF05494 MlaC protein AM374_RS15325 PF02470 MlaD protein AM374_RS15330 PF02405 Permease MlaE AM374_RS15335 PF00005 ABC transporter AM374_RS15340 PF01699 Sodium/calcium exchanger protein AM374_RS15345 PF00571 CBS domain AM374_RS15345 PF01380 SIS domain AM374_RS15355 PF06835 Lipopolysaccharide-assembly, LptC-related AM374_RS15360 PF03968 OstA-like protein AM374_RS15365 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM374_RS15365 PF00005 ABC transporter AM374_RS15370 PF04552 Sigma-54, DNA binding domain AM374_RS15370 PF04963 Sigma-54 factor, core binding domain AM374_RS15370 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM374_RS15375 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM374_RS15380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM374_RS15385 PF03668 P-loop ATPase protein family AM374_RS15390 PF00381 PTS HPr component phosphorylation site AM374_RS15400 PF10707 PhoP regulatory network protein YrbL AM374_RS15405 PF00912 Transglycosylase AM374_RS15415 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS15415 PF00072 Response regulator receiver domain AM374_RS15415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS15415 PF00989 PAS fold AM374_RS15415 PF18415 Histidine kinase receptor ArcB trans-membrane domain AM374_RS15415 PF01627 Hpt domain AM374_RS15420 PF16199 Radical_SAM C-terminal domain AM374_RS15420 PF04055 Radical SAM superfamily AM374_RS15435 PF04898 Glutamate synthase central domain AM374_RS15435 PF01645 Conserved region in glutamate synthase AM374_RS15435 PF01493 GXGXG motif AM374_RS15435 PF00310 Glutamine amidotransferases class-II AM374_RS15440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS15440 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM374_RS15445 PF17761 DUF1016 N-terminal domain AM374_RS15445 PF06250 YhcG PDDEXK nuclease domain AM374_RS15450 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM374_RS15455 PF07969 Amidohydrolase family AM374_RS15460 PF04074 YhcH/YjgK/YiaL AM374_RS15465 PF00480 ROK family AM374_RS15470 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AM374_RS15475 PF07690 Major Facilitator Superfamily AM374_RS15480 PF00701 Dihydrodipicolinate synthetase family AM374_RS15485 PF07729 FCD domain AM374_RS15485 PF00392 Bacterial regulatory proteins, gntR family AM374_RS15490 PF04386 Stringent starvation protein B AM374_RS15495 PF02798 Glutathione S-transferase, N-terminal domain AM374_RS15495 PF00043 Glutathione S-transferase, C-terminal domain AM374_RS15505 PF00380 Ribosomal protein S9/S16 AM374_RS15510 PF00572 Ribosomal protein L13 AM374_RS15515 PF03969 AFG1-like ATPase AM374_RS15520 PF06295 Protein of unknown function (DUF1043) AM374_RS15525 PF00595 PDZ domain AM374_RS15525 PF13180 PDZ domain AM374_RS15530 PF13180 PDZ domain AM374_RS15535 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM374_RS15540 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AM374_RS15545 PF02436 Conserved carboxylase domain AM374_RS15545 PF00682 HMGL-like AM374_RS15545 PF00364 Biotin-requiring enzyme AM374_RS15550 PF04277 Oxaloacetate decarboxylase, gamma chain AM374_RS15555 PF05683 Fumarase C-terminus AM374_RS15560 PF05681 Fumarate hydratase (Fumerase) AM374_RS15565 PF00939 Sodium:sulfate symporter transmembrane region AM374_RS15575 PF07702 UTRA domain AM374_RS15575 PF00392 Bacterial regulatory proteins, gntR family AM374_RS15580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM374_RS15580 PF00056 lactate/malate dehydrogenase, NAD binding domain AM374_RS15585 PF02863 Arginine repressor, C-terminal domain AM374_RS15585 PF01316 Arginine repressor, DNA binding domain AM374_RS15590 PF07338 Protein of unknown function (DUF1471) AM374_RS15595 PF07338 Protein of unknown function (DUF1471) AM374_RS15600 PF01337 Barstar (barnase inhibitor) AM374_RS15605 PF04632 Fusaric acid resistance protein family AM374_RS15610 PF13533 Biotin-lipoyl like AM374_RS15615 PF07869 Protein of unknown function (DUF1656) AM374_RS15620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS15620 PF03466 LysR substrate binding domain AM374_RS15625 PF01523 Putative modulator of DNA gyrase AM374_RS15630 PF13502 AsmA-like C-terminal region AM374_RS15630 PF13116 Protein of unknown function AM374_RS15635 PF00575 S1 RNA binding domain AM374_RS15635 PF10150 Ribonuclease E/G family AM374_RS15640 PF02545 Maf-like protein AM374_RS15645 PF04093 rod shape-determining protein MreD AM374_RS15650 PF04085 rod shape-determining protein MreC AM374_RS15665 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS15665 PF00563 EAL domain AM374_RS15665 PF17157 Gammaproteobacterial periplasmic sensor domain AM374_RS15670 PF00107 Zinc-binding dehydrogenase AM374_RS15670 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS15675 PF00174 Oxidoreductase molybdopterin binding domain AM374_RS15680 PF01794 Ferric reductase like transmembrane component AM374_RS15685 PF00364 Biotin-requiring enzyme AM374_RS15690 PF02785 Biotin carboxylase C-terminal domain AM374_RS15690 PF00289 Biotin carboxylase, N-terminal domain AM374_RS15690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM374_RS15695 PF06196 Protein of unknown function (DUF997) AM374_RS15700 PF00474 Sodium:solute symporter family AM374_RS15715 PF01207 Dihydrouridine synthase (Dus) AM374_RS15720 PF02954 Bacterial regulatory protein, Fis family AM374_RS15725 PF01555 DNA methylase AM374_RS15730 PF10831 Protein of unknown function (DUF2556) AM374_RS15735 PF00563 EAL domain AM374_RS15735 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS15735 PF03707 Bacterial signalling protein N terminal repeat AM374_RS15740 PF00440 Bacterial regulatory proteins, tetR family AM374_RS15740 PF08361 MAATS-type transcriptional repressor, C-terminal region AM374_RS15745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM374_RS15745 PF00529 HlyD membrane-fusion protein of T1SS AM374_RS15750 PF00873 AcrB/AcrD/AcrF family AM374_RS15795 PF00132 Bacterial transferase hexapeptide (six repeats) AM374_RS15800 PF07369 Protein of unknown function (DUF1488) AM374_RS15805 PF08501 Shikimate dehydrogenase substrate binding domain AM374_RS15805 PF01488 Shikimate / quinate 5-dehydrogenase AM374_RS15805 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM374_RS15810 PF01300 Telomere recombination AM374_RS15815 PF01396 Topoisomerase DNA binding C4 zinc finger AM374_RS15820 PF04361 Protein of unknown function (DUF494) AM374_RS15825 PF17782 DprA winged helix domain AM374_RS15825 PF02481 DNA recombination-mediator protein A AM374_RS15830 PF01327 Polypeptide deformylase AM374_RS15835 PF02911 Formyl transferase, C-terminal domain AM374_RS15835 PF00551 Formyl transferase AM374_RS15840 PF01029 NusB family AM374_RS15840 PF01189 16S rRNA methyltransferase RsmB/F AM374_RS15845 PF02254 TrkA-N domain AM374_RS15845 PF02080 TrkA-C domain AM374_RS15850 PF01741 Large-conductance mechanosensitive channel, MscL AM374_RS15855 PF03889 Alternative ribosome-rescue factor A AM374_RS15860 PF13411 MerR HTH family regulatory protein AM374_RS15865 PF09350 Domain of unknown function (DUF1992) AM374_RS15870 PF01196 Ribosomal protein L17 AM374_RS15875 PF01000 RNA polymerase Rpb3/RpoA insert domain AM374_RS15875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM374_RS15875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM374_RS15880 PF00163 Ribosomal protein S4/S9 N-terminal domain AM374_RS15880 PF01479 S4 domain AM374_RS15885 PF00411 Ribosomal protein S11 AM374_RS15890 PF00416 Ribosomal protein S13/S18 AM374_RS15895 PF00444 Ribosomal protein L36 AM374_RS15900 PF00344 SecY translocase AM374_RS15905 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM374_RS15910 PF00327 Ribosomal protein L30p/L7e AM374_RS15915 PF00333 Ribosomal protein S5, N-terminal domain AM374_RS15915 PF03719 Ribosomal protein S5, C-terminal domain AM374_RS15920 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM374_RS15925 PF00347 Ribosomal protein L6 AM374_RS15930 PF00410 Ribosomal protein S8 AM374_RS15935 PF00253 Ribosomal protein S14p/S29e AM374_RS15940 PF00281 Ribosomal protein L5 AM374_RS15940 PF00673 ribosomal L5P family C-terminus AM374_RS15945 PF00467 KOW motif AM374_RS15945 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM374_RS15950 PF00238 Ribosomal protein L14p/L23e AM374_RS15955 PF00366 Ribosomal protein S17 AM374_RS15960 PF00831 Ribosomal L29 protein AM374_RS15965 PF00252 Ribosomal protein L16p/L10e AM374_RS15970 PF07650 KH domain AM374_RS15970 PF00189 Ribosomal protein S3, C-terminal domain AM374_RS15975 PF00237 Ribosomal protein L22p/L17e AM374_RS15980 PF00203 Ribosomal protein S19 AM374_RS15985 PF03947 Ribosomal Proteins L2, C-terminal domain AM374_RS15985 PF00181 Ribosomal Proteins L2, RNA binding domain AM374_RS15990 PF00276 Ribosomal protein L23 AM374_RS15995 PF00573 Ribosomal protein L4/L1 family AM374_RS16000 PF00297 Ribosomal protein L3 AM374_RS16005 PF00338 Ribosomal protein S10p/S20e AM374_RS16015 PF01478 Type IV leader peptidase family AM374_RS16020 PF00210 Ferritin-like domain AM374_RS16025 PF04324 BFD-like [2Fe-2S] binding domain AM374_RS16040 PF03143 Elongation factor Tu C-terminal domain AM374_RS16040 PF03144 Elongation factor Tu domain 2 AM374_RS16040 PF00009 Elongation factor Tu GTP binding domain AM374_RS16045 PF03144 Elongation factor Tu domain 2 AM374_RS16045 PF00679 Elongation factor G C-terminus AM374_RS16045 PF00009 Elongation factor Tu GTP binding domain AM374_RS16045 PF03764 Elongation factor G, domain IV AM374_RS16045 PF14492 Elongation Factor G, domain II AM374_RS16050 PF00177 Ribosomal protein S7p/S5e AM374_RS16055 PF00164 Ribosomal protein S12/S23 AM374_RS16060 PF04077 DsrH like protein AM374_RS16065 PF02635 DsrE/DsrF-like family AM374_RS16070 PF02635 DsrE/DsrF-like family AM374_RS16075 PF08348 YheO-like PAS domain AM374_RS16075 PF13309 HTH domain AM374_RS16080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM374_RS16080 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM374_RS16085 PF04102 SlyX AM374_RS16095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM374_RS16100 PF09526 Probable metal-binding protein (DUF2387) AM374_RS16105 PF00999 Sodium/hydrogen exchanger family AM374_RS16105 PF02254 TrkA-N domain AM374_RS16110 PF02525 Flavodoxin-like fold AM374_RS16115 PF12848 ABC transporter AM374_RS16115 PF00005 ABC transporter AM374_RS16120 PF03466 LysR substrate binding domain AM374_RS16120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS16125 PF08803 Putative mono-oxygenase ydhR AM374_RS16135 PF00561 alpha/beta hydrolase fold AM374_RS16140 PF06794 Uncharacterised protein family (UPF0270) AM374_RS16145 PF00485 Phosphoribulokinase / Uridine kinase family AM374_RS16150 PF02566 OsmC-like protein AM374_RS16155 PF13545 Crp-like helix-turn-helix domain AM374_RS16155 PF00027 Cyclic nucleotide-binding domain AM374_RS16160 PF12805 FUSC-like inner membrane protein yccS AM374_RS16165 PF00202 Aminotransferase class-III AM374_RS16170 PF00117 Glutamine amidotransferase class-I AM374_RS16175 PF02661 Fic/DOC family AM374_RS16180 PF10832 Protein of unknown function (DUF2559) AM374_RS16185 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM374_RS16190 PF07690 Major Facilitator Superfamily AM374_RS16195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM374_RS16195 PF04324 BFD-like [2Fe-2S] binding domain AM374_RS16195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM374_RS16195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS16195 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM374_RS16200 PF13806 Rieske-like [2Fe-2S] domain AM374_RS16205 PF01226 Formate/nitrite transporter AM374_RS16210 PF10414 Sirohaem synthase dimerisation region AM374_RS16210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM374_RS16210 PF14824 Sirohaem biosynthesis protein central AM374_RS16220 PF13978 Protein of unknown function (DUF4223) AM374_RS16225 PF00579 tRNA synthetases class I (W and Y) AM374_RS16230 PF13419 Haloacid dehalogenase-like hydrolase AM374_RS16235 PF00834 Ribulose-phosphate 3 epimerase family AM374_RS16240 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM374_RS16245 PF05036 Sporulation related domain AM374_RS16250 PF01761 3-dehydroquinate synthase AM374_RS16255 PF01202 Shikimate kinase AM374_RS16265 PF03958 Bacterial type II/III secretion system short domain AM374_RS16265 PF00263 Bacterial type II and III secretion system protein AM374_RS16270 PF10748 DNA utilization proteins HofP AM374_RS16280 PF05137 Fimbrial assembly protein (PilN) AM374_RS16290 PF00905 Penicillin binding protein transpeptidase domain AM374_RS16290 PF00912 Transglycosylase AM374_RS16290 PF17092 Penicillin-binding protein OB-like domain AM374_RS16295 PF00293 NUDIX domain AM374_RS16300 PF07095 Intracellular growth attenuator protein IgaA AM374_RS16305 PF13419 Haloacid dehalogenase-like hydrolase AM374_RS16310 PF01479 S4 domain AM374_RS16315 PF01430 Hsp33 protein AM374_RS16320 PF13687 Domain of unknown function (DUF4153) AM374_RS16325 PF01293 Phosphoenolpyruvate carboxykinase AM374_RS16330 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS16330 PF00672 HAMP domain AM374_RS16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS16335 PF00072 Response regulator receiver domain AM374_RS16335 PF00486 Transcriptional regulatory protein, C terminal AM374_RS16340 PF03449 Transcription elongation factor, N-terminal AM374_RS16340 PF01272 Transcription elongation factor, GreA/GreB, C-term AM374_RS16345 PF16921 Tex protein YqgF-like domain AM374_RS16345 PF09371 Tex-like protein N-terminal domain AM374_RS16345 PF17674 HHH domain AM374_RS16345 PF00575 S1 RNA binding domain AM374_RS16355 PF04023 FeoA domain AM374_RS16360 PF17910 FeoB cytosolic helical domain AM374_RS16360 PF07670 Nucleoside recognition AM374_RS16360 PF02421 Ferrous iron transport protein B AM374_RS16360 PF07664 Ferrous iron transport protein B C terminus AM374_RS16365 PF09012 FeoC like transcriptional regulator AM374_RS16370 PF04754 Putative transposase, YhgA-like AM374_RS16375 PF00561 alpha/beta hydrolase fold AM374_RS16380 PF00156 Phosphoribosyl transferase domain AM374_RS16385 PF01106 NifU-like domain AM374_RS16385 PF01521 Iron-sulphur cluster biosynthesis AM374_RS16390 PF02447 GntP family permease AM374_RS16395 PF02446 4-alpha-glucanotransferase AM374_RS16400 PF00343 Carbohydrate phosphorylase AM374_RS16405 PF17874 MalT-like TPR region AM374_RS16405 PF00196 Bacterial regulatory proteins, luxR family AM374_RS16415 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AM374_RS16415 PF01137 RNA 3'-terminal phosphate cyclase AM374_RS16420 PF01139 tRNA-splicing ligase RtcB AM374_RS16430 PF06956 Regulator of RNA terminal phosphate cyclase AM374_RS16430 PF00158 Sigma-54 interaction domain AM374_RS16435 PF08220 DeoR-like helix-turn-helix domain AM374_RS16435 PF00455 DeoR C terminal sensor domain AM374_RS16440 PF01694 Rhomboid family AM374_RS16440 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AM374_RS16445 PF00581 Rhodanese-like domain AM374_RS16450 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM374_RS16450 PF01266 FAD dependent oxidoreductase AM374_RS16465 PF00465 Iron-containing alcohol dehydrogenase AM374_RS16470 PF07690 Major Facilitator Superfamily AM374_RS16475 PF00920 Dehydratase family AM374_RS16480 PF00701 Dihydrodipicolinate synthetase family AM374_RS16485 PF01614 Bacterial transcriptional regulator AM374_RS16485 PF09339 IclR helix-turn-helix domain AM374_RS16490 PF00343 Carbohydrate phosphorylase AM374_RS16495 PF00534 Glycosyl transferases group 1 AM374_RS16495 PF08323 Starch synthase catalytic domain AM374_RS16500 PF00483 Nucleotidyl transferase AM374_RS16505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM374_RS16505 PF00128 Alpha amylase, catalytic domain AM374_RS16505 PF18390 Glycogen debranching enzyme C-terminal domain AM374_RS16510 PF00128 Alpha amylase, catalytic domain AM374_RS16510 PF02806 Alpha amylase, C-terminal all-beta domain AM374_RS16510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM374_RS16515 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM374_RS16515 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM374_RS16525 PF02447 GntP family permease AM374_RS16530 PF01202 Shikimate kinase AM374_RS16535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM374_RS16535 PF00356 Bacterial regulatory proteins, lacI family AM374_RS16540 PF17954 Quercetinase C-terminal cupin domain AM374_RS16540 PF02678 Pirin AM374_RS16545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM374_RS16545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM374_RS16555 PF00583 Acetyltransferase (GNAT) family AM374_RS16560 PF00294 pfkB family carbohydrate kinase AM374_RS16575 PF02126 Phosphotriesterase family AM374_RS16585 PF10956 Protein of unknown function (DUF2756) AM374_RS16590 PF03009 Glycerophosphoryl diester phosphodiesterase family AM374_RS16595 PF17912 MalK OB fold domain AM374_RS16595 PF00005 ABC transporter AM374_RS16600 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS16605 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS16610 PF13416 Bacterial extracellular solute-binding protein AM374_RS16620 PF00005 ABC transporter AM374_RS16625 PF00005 ABC transporter AM374_RS16625 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM374_RS16630 PF11862 Domain of unknown function (DUF3382) AM374_RS16630 PF02653 Branched-chain amino acid transport system / permease component AM374_RS16635 PF02653 Branched-chain amino acid transport system / permease component AM374_RS16640 PF13458 Periplasmic binding protein AM374_RS16645 PF12568 Acetyltransferase (GNAT) domain, PanZ AM374_RS16655 PF13458 Periplasmic binding protein AM374_RS16660 PF04542 Sigma-70 region 2 AM374_RS16660 PF04545 Sigma-70, region 4 AM374_RS16665 PF02687 FtsX-like permease family AM374_RS16665 PF18075 FtsX extracellular domain AM374_RS16670 PF00005 ABC transporter AM374_RS16675 PF02881 SRP54-type protein, helical bundle domain AM374_RS16675 PF00448 SRP54-type protein, GTPase domain AM374_RS16685 PF06611 Protein of unknown function (DUF1145) AM374_RS16690 PF10694 Protein of unknown function (DUF2500) AM374_RS16695 PF07947 YhhN family AM374_RS16700 PF00403 Heavy-metal-associated domain AM374_RS16705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM374_RS16705 PF00672 HAMP domain AM374_RS16705 PF02203 Tar ligand binding domain homologue AM374_RS16710 PF01206 Sulfurtransferase TusA AM374_RS16715 PF02592 Putative vitamin uptake transporter AM374_RS16720 PF08786 DcrB AM374_RS16725 PF07690 Major Facilitator Superfamily AM374_RS16730 PF01594 AI-2E family transporter AM374_RS16735 PF01648 4'-phosphopantetheinyl transferase superfamily AM374_RS16740 PF01402 Ribbon-helix-helix protein, copG family AM374_RS16740 PF08753 NikR C terminal nickel binding domain AM374_RS16750 PF00005 ABC transporter AM374_RS16755 PF13533 Biotin-lipoyl like AM374_RS16765 PF00672 HAMP domain AM374_RS16765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS16765 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS16770 PF00486 Transcriptional regulatory protein, C terminal AM374_RS16770 PF00072 Response regulator receiver domain AM374_RS16775 PF05425 Copper resistance protein D AM374_RS16780 PF04234 CopC domain AM374_RS16785 PF05275 Copper resistance protein B precursor (CopB) AM374_RS16790 PF07731 Multicopper oxidase AM374_RS16790 PF07732 Multicopper oxidase AM374_RS16790 PF00394 Multicopper oxidase AM374_RS16800 PF08525 Opacity-associated protein A N-terminal motif AM374_RS16800 PF01476 LysM domain AM374_RS16800 PF01551 Peptidase family M23 AM374_RS16810 PF04945 YHS domain AM374_RS16820 PF00873 AcrB/AcrD/AcrF family AM374_RS16825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM374_RS16830 PF11604 Copper binding periplasmic protein CusF AM374_RS16835 PF02321 Outer membrane efflux protein AM374_RS16840 PF00072 Response regulator receiver domain AM374_RS16840 PF00486 Transcriptional regulatory protein, C terminal AM374_RS16845 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS16845 PF00672 HAMP domain AM374_RS16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS16880 PF11426 Tn7 transposition regulator TnsC AM374_RS16880 PF13401 AAA domain AM374_RS16885 PF00665 Integrase core domain AM374_RS16890 PF08722 TnsA endonuclease N terminal AM374_RS16890 PF08721 TnsA endonuclease C terminal AM374_RS16900 PF01384 Phosphate transporter family AM374_RS16905 PF10625 Universal stress protein B (UspB) AM374_RS16910 PF00582 Universal stress protein family AM374_RS16915 PF00854 POT family AM374_RS16920 PF04445 Putative SAM-dependent methyltransferase AM374_RS16925 PF01432 Peptidase family M3 AM374_RS16940 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM374_RS16945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM374_RS16945 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS16950 PF07690 Major Facilitator Superfamily AM374_RS16955 PF01261 Xylose isomerase-like TIM barrel AM374_RS16960 PF01418 Helix-turn-helix domain, rpiR family AM374_RS16960 PF01380 SIS domain AM374_RS16965 PF00294 pfkB family carbohydrate kinase AM374_RS16970 PF00710 Asparaginase, N-terminal AM374_RS16970 PF17763 Glutaminase/Asparaginase C-terminal domain AM374_RS16975 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM374_RS16980 PF00294 pfkB family carbohydrate kinase AM374_RS16985 PF01380 SIS domain AM374_RS16990 PF07702 UTRA domain AM374_RS16990 PF00392 Bacterial regulatory proteins, gntR family AM374_RS16995 PF01204 Trehalase AM374_RS17010 PF00196 Bacterial regulatory proteins, luxR family AM374_RS17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS17015 PF03466 LysR substrate binding domain AM374_RS17020 PF03631 Virulence factor BrkB AM374_RS17025 PF00083 Sugar (and other) transporter AM374_RS17025 PF07690 Major Facilitator Superfamily AM374_RS17030 PF05170 AsmA family AM374_RS17035 PF00563 EAL domain AM374_RS17040 PF00294 pfkB family carbohydrate kinase AM374_RS17045 PF05193 Peptidase M16 inactive domain AM374_RS17045 PF00675 Insulinase (Peptidase family M16) AM374_RS17050 PF00375 Sodium:dicarboxylate symporter family AM374_RS17055 PF00563 EAL domain AM374_RS17055 PF17154 Gammaproteobacterial periplasmic sensor domain AM374_RS17055 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS17055 PF00672 HAMP domain AM374_RS17065 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AM374_RS17065 PF13176 Tetratricopeptide repeat AM374_RS17070 PF01270 Glycosyl hydrolases family 8 AM374_RS17075 PF03170 Bacterial cellulose synthase subunit AM374_RS17085 PF06564 Cellulose biosynthesis protein BcsQ AM374_RS17090 PF10945 Cellulose biosynthesis protein BcsR AM374_RS17095 PF10995 Cellulose biosynthesis GIL AM374_RS17100 PF11120 Cellulose biosynthesis protein BcsF AM374_RS17105 PF11658 Cellulose biosynthesis protein BcsG AM374_RS17110 PF13940 Toxin Ldr, type I toxin-antitoxin system AM374_RS17120 PF03222 Tryptophan/tyrosine permease family AM374_RS17125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM374_RS17125 PF00005 ABC transporter AM374_RS17130 PF00005 ABC transporter AM374_RS17130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM374_RS17135 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS17135 PF12911 N-terminal TM domain of oligopeptide transport permease C AM374_RS17140 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS17145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM374_RS17150 PF00860 Permease family AM374_RS17175 PF08019 Phosphoethanolamine transferase EptA/EptB AM374_RS17175 PF00884 Sulfatase AM374_RS17180 PF00419 Fimbrial protein AM374_RS17185 PF00419 Fimbrial protein AM374_RS17190 PF00577 Outer membrane usher protein AM374_RS17190 PF13953 PapC C-terminal domain AM374_RS17190 PF13954 PapC N-terminal domain AM374_RS17195 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS17195 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS17200 PF00419 Fimbrial protein AM374_RS17205 PF03797 Autotransporter beta-domain AM374_RS17210 PF03352 Methyladenine glycosylase AM374_RS17215 PF00583 Acetyltransferase (GNAT) family AM374_RS17220 PF01568 Molydopterin dinucleotide binding domain AM374_RS17220 PF00384 Molybdopterin oxidoreductase AM374_RS17220 PF18364 Molybdopterin oxidoreductase N-terminal domain AM374_RS17225 PF00691 OmpA family AM374_RS17225 PF13488 Glycine zipper AM374_RS17230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM374_RS17230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM374_RS17235 PF11254 Protein of unknown function (DUF3053) AM374_RS17240 PF01381 Helix-turn-helix AM374_RS17245 PF00313 'Cold-shock' DNA-binding domain AM374_RS17280 PF13333 Integrase core domain AM374_RS17280 PF00665 Integrase core domain AM374_RS17280 PF13276 HTH-like domain AM374_RS17285 PF02092 Glycyl-tRNA synthetase beta subunit AM374_RS17285 PF05746 DALR anticodon binding domain AM374_RS17290 PF02091 Glycyl-tRNA synthetase alpha subunit AM374_RS17295 PF13983 YsaB-like lipoprotein AM374_RS17305 PF01757 Acyltransferase family AM374_RS17310 PF05360 yiaA/B two helix domain AM374_RS17315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM374_RS17315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM374_RS17330 PF12833 Helix-turn-helix domain AM374_RS17335 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM374_RS17340 PF00128 Alpha amylase, catalytic domain AM374_RS17345 PF00155 Aminotransferase class I and II AM374_RS17350 PF13247 4Fe-4S dicluster domain AM374_RS17355 PF09339 IclR helix-turn-helix domain AM374_RS17355 PF01614 Bacterial transcriptional regulator AM374_RS17360 PF02615 Malate/L-lactate dehydrogenase AM374_RS17365 PF04074 YhcH/YjgK/YiaL AM374_RS17370 PF16154 Domain of unknown function (DUF4862) AM374_RS17375 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AM374_RS17380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM374_RS17385 PF03480 Bacterial extracellular solute-binding protein, family 7 AM374_RS17390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM374_RS17390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM374_RS17395 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM374_RS17400 PF01261 Xylose isomerase-like TIM barrel AM374_RS17405 PF00596 Class II Aldolase and Adducin N-terminal domain AM374_RS17415 PF00171 Aldehyde dehydrogenase family AM374_RS17420 PF00480 ROK family AM374_RS17425 PF00009 Elongation factor Tu GTP binding domain AM374_RS17425 PF09107 Elongation factor SelB, winged helix AM374_RS17425 PF03144 Elongation factor Tu domain 2 AM374_RS17425 PF09106 Elongation factor SelB, winged helix AM374_RS17430 PF03841 L-seryl-tRNA selenium transferase AM374_RS17430 PF12390 Selenocysteine synthase N terminal AM374_RS17435 PF13417 Glutathione S-transferase, N-terminal domain AM374_RS17435 PF00043 Glutathione S-transferase, C-terminal domain AM374_RS17440 PF02378 Phosphotransferase system, EIIC AM374_RS17440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM374_RS17440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM374_RS17445 PF01232 Mannitol dehydrogenase Rossmann domain AM374_RS17445 PF08125 Mannitol dehydrogenase C-terminal domain AM374_RS17450 PF05068 Mannitol repressor AM374_RS17460 PF10928 Protein of unknown function (DUF2810) AM374_RS17465 PF11622 Protein of unknown function (DUF3251) AM374_RS17470 PF05658 Head domain of trimeric autotransporter adhesin AM374_RS17470 PF03895 YadA-like membrane anchor domain AM374_RS17470 PF05662 Coiled stalk of trimeric autotransporter adhesin AM374_RS17470 PF13018 Extended Signal Peptide of Type V secretion system AM374_RS17475 PF02652 L-lactate permease AM374_RS17480 PF00392 Bacterial regulatory proteins, gntR family AM374_RS17480 PF07729 FCD domain AM374_RS17485 PF01070 FMN-dependent dehydrogenase AM374_RS17490 PF00588 SpoU rRNA Methylase family AM374_RS17495 PF00356 Bacterial regulatory proteins, lacI family AM374_RS17505 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM374_RS17505 PF13378 Enolase C-terminal domain-like AM374_RS17510 PF07690 Major Facilitator Superfamily AM374_RS17515 PF06426 Serine acetyltransferase, N-terminal AM374_RS17515 PF00132 Bacterial transferase hexapeptide (six repeats) AM374_RS17520 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM374_RS17520 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM374_RS17525 PF02556 Preprotein translocase subunit SecB AM374_RS17530 PF00462 Glutaredoxin AM374_RS17535 PF00581 Rhodanese-like domain AM374_RS17540 PF01676 Metalloenzyme superfamily AM374_RS17540 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM374_RS17545 PF01551 Peptidase family M23 AM374_RS17550 PF04748 Divergent polysaccharide deacetylase AM374_RS17555 PF00535 Glycosyl transferase family 2 AM374_RS17560 PF00107 Zinc-binding dehydrogenase AM374_RS17560 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS17565 PF00155 Aminotransferase class I and II AM374_RS17570 PF01370 NAD dependent epimerase/dehydratase family AM374_RS17575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM374_RS17580 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM374_RS17585 PF04932 O-Antigen ligase AM374_RS17590 PF00534 Glycosyl transferases group 1 AM374_RS17600 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) AM374_RS17605 PF08437 Glycosyl transferase family 8 C-terminal AM374_RS17605 PF01501 Glycosyl transferase family 8 AM374_RS17610 PF01501 Glycosyl transferase family 8 AM374_RS17610 PF08437 Glycosyl transferase family 8 C-terminal AM374_RS17615 PF00534 Glycosyl transferases group 1 AM374_RS17615 PF13439 Glycosyltransferase Family 4 AM374_RS17630 PF13439 Glycosyltransferase Family 4 AM374_RS17630 PF00534 Glycosyl transferases group 1 AM374_RS17635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM374_RS17640 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM374_RS17645 PF01467 Cytidylyltransferase-like AM374_RS17650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM374_RS17650 PF06827 Zinc finger found in FPG and IleRS AM374_RS17650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM374_RS17655 PF00471 Ribosomal protein L33 AM374_RS17660 PF00830 Ribosomal L28 family AM374_RS17665 PF04002 RadC-like JAB domain AM374_RS17670 PF02441 Flavoprotein AM374_RS17670 PF04127 DNA / pantothenate metabolism flavoprotein AM374_RS17675 PF00692 dUTPase AM374_RS17680 PF00440 Bacterial regulatory proteins, tetR family AM374_RS17685 PF00156 Phosphoribosyl transferase domain AM374_RS17690 PF01138 3' exoribonuclease family, domain 1 AM374_RS17690 PF03725 3' exoribonuclease family, domain 2 AM374_RS17700 PF08340 Domain of unknown function (DUF1732) AM374_RS17700 PF03755 YicC-like family, N-terminal region AM374_RS17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS17705 PF03466 LysR substrate binding domain AM374_RS17715 PF03458 UPF0126 domain AM374_RS17720 PF03120 NAD-dependent DNA ligase OB-fold domain AM374_RS17720 PF01653 NAD-dependent DNA ligase adenylation domain AM374_RS17725 PF00625 Guanylate kinase AM374_RS17730 PF01192 RNA polymerase Rpb6 AM374_RS17735 PF13291 ACT domain AM374_RS17735 PF02824 TGS domain AM374_RS17735 PF04607 Region found in RelA / SpoT proteins AM374_RS17740 PF00588 SpoU rRNA Methylase family AM374_RS17740 PF12105 SpoU, rRNA methylase, C-terminal AM374_RS17745 PF00270 DEAD/DEAH box helicase AM374_RS17745 PF17191 RecG wedge domain AM374_RS17745 PF00271 Helicase conserved C-terminal domain AM374_RS17750 PF03616 Sodium/glutamate symporter AM374_RS17755 PF00860 Permease family AM374_RS17760 PF05170 AsmA family AM374_RS17765 PF13802 Galactose mutarotase-like AM374_RS17765 PF01055 Glycosyl hydrolases family 31 AM374_RS17805 PF00196 Bacterial regulatory proteins, luxR family AM374_RS17810 PF03797 Autotransporter beta-domain AM374_RS17820 PF00486 Transcriptional regulatory protein, C terminal AM374_RS17830 PF00857 Isochorismatase family AM374_RS17850 PF00689 Cation transporting ATPase, C-terminus AM374_RS17850 PF00690 Cation transporter/ATPase, N-terminus AM374_RS17855 PF02308 MgtC family AM374_RS17860 PF00892 EamA-like transporter family AM374_RS17865 PF04754 Putative transposase, YhgA-like AM374_RS17870 PF07071 KDGP aldolase AM374_RS17875 PF03841 L-seryl-tRNA selenium transferase AM374_RS17880 PF03613 PTS system mannose/fructose/sorbose family IID component AM374_RS17885 PF03609 PTS system sorbose-specific iic component AM374_RS17890 PF03610 PTS system fructose IIA component AM374_RS17890 PF03830 PTS system sorbose subfamily IIB component AM374_RS17905 PF00158 Sigma-54 interaction domain AM374_RS17905 PF00874 PRD domain AM374_RS17915 PF00232 Glycosyl hydrolase family 1 AM374_RS17920 PF07690 Major Facilitator Superfamily AM374_RS17950 PF01116 Fructose-bisphosphate aldolase class-II AM374_RS17960 PF03611 PTS system sugar-specific permease component AM374_RS17965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM374_RS17970 PF08279 HTH domain AM374_RS17970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM374_RS17970 PF00874 PRD domain AM374_RS17970 PF05043 Mga helix-turn-helix domain AM374_RS17975 PF07702 UTRA domain AM374_RS17975 PF00392 Bacterial regulatory proteins, gntR family AM374_RS17980 PF06711 Protein of unknown function (DUF1198) AM374_RS17985 PF07690 Major Facilitator Superfamily AM374_RS17990 PF07690 Major Facilitator Superfamily AM374_RS17995 PF05231 MASE1 AM374_RS17995 PF07730 Histidine kinase AM374_RS17995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS18000 PF00072 Response regulator receiver domain AM374_RS18000 PF00196 Bacterial regulatory proteins, luxR family AM374_RS18010 PF07690 Major Facilitator Superfamily AM374_RS18015 PF00294 pfkB family carbohydrate kinase AM374_RS18020 PF00455 DeoR C terminal sensor domain AM374_RS18020 PF08220 DeoR-like helix-turn-helix domain AM374_RS18025 PF01842 ACT domain AM374_RS18030 PF00205 Thiamine pyrophosphate enzyme, central domain AM374_RS18030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM374_RS18030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM374_RS18035 PF08049 IlvB leader peptide AM374_RS18045 PF13939 Toxin TisB, type I toxin-antitoxin system AM374_RS18055 PF07690 Major Facilitator Superfamily AM374_RS18065 PF03466 LysR substrate binding domain AM374_RS18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS18070 PF02447 GntP family permease AM374_RS18075 PF00291 Pyridoxal-phosphate dependent enzyme AM374_RS18085 PF02656 Domain of unknown function (DUF202) AM374_RS18090 PF02656 Domain of unknown function (DUF202) AM374_RS18095 PF06826 Predicted Permease Membrane Region AM374_RS18095 PF02080 TrkA-C domain AM374_RS18100 PF00011 Hsp20/alpha crystallin family AM374_RS18105 PF00011 Hsp20/alpha crystallin family AM374_RS18110 PF07119 Protein of unknown function (DUF1375) AM374_RS18115 PF07676 WD40-like Beta Propeller Repeat AM374_RS18115 PF12566 Protein of unknown function (DUF3748) AM374_RS18120 PF03918 Cytochrome C biogenesis protein AM374_RS18125 PF08534 Redoxin AM374_RS18135 PF03100 CcmE AM374_RS18140 PF04995 Heme exporter protein D (CcmD) AM374_RS18145 PF01578 Cytochrome C assembly protein AM374_RS18150 PF03379 CcmB protein AM374_RS18155 PF00005 ABC transporter AM374_RS18160 PF03150 Di-haem cytochrome c peroxidase AM374_RS18160 PF00034 Cytochrome c AM374_RS18160 PF14376 Haem-binding domain AM374_RS18165 PF02613 Nitrate reductase delta subunit AM374_RS18170 PF01568 Molydopterin dinucleotide binding domain AM374_RS18170 PF18364 Molybdopterin oxidoreductase N-terminal domain AM374_RS18170 PF00384 Molybdopterin oxidoreductase AM374_RS18175 PF03264 NapC/NirT cytochrome c family, N-terminal region AM374_RS18180 PF00486 Transcriptional regulatory protein, C terminal AM374_RS18180 PF00072 Response regulator receiver domain AM374_RS18185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM374_RS18190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS18190 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS18190 PF01627 Hpt domain AM374_RS18190 PF00072 Response regulator receiver domain AM374_RS18190 PF00672 HAMP domain AM374_RS18225 PF18053 DNA gyrase B subunit insert domain AM374_RS18225 PF00204 DNA gyrase B AM374_RS18225 PF01751 Toprim domain AM374_RS18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS18225 PF00986 DNA gyrase B subunit, carboxyl terminus AM374_RS18230 PF02463 RecF/RecN/SMC N terminal domain AM374_RS18235 PF02768 DNA polymerase III beta subunit, C-terminal domain AM374_RS18235 PF02767 DNA polymerase III beta subunit, central domain AM374_RS18235 PF00712 DNA polymerase III beta subunit, N-terminal domain AM374_RS18240 PF11638 DnaA N-terminal domain AM374_RS18240 PF08299 Bacterial dnaA protein helix-turn-helix AM374_RS18240 PF00308 Bacterial dnaA protein AM374_RS18245 PF00468 Ribosomal protein L34 AM374_RS18250 PF00825 Ribonuclease P AM374_RS18255 PF01809 Putative membrane protein insertion efficiency factor AM374_RS18260 PF14849 YidC periplasmic domain AM374_RS18260 PF02096 60Kd inner membrane protein AM374_RS18265 PF10396 GTP-binding protein TrmE N-terminus AM374_RS18265 PF12631 MnmE helical domain AM374_RS18265 PF01926 50S ribosome-binding GTPase AM374_RS18285 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM374_RS18295 PF07690 Major Facilitator Superfamily AM374_RS18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS18300 PF03466 LysR substrate binding domain AM374_RS18310 PF03358 NADPH-dependent FMN reductase AM374_RS18315 PF00860 Permease family AM374_RS18325 PF13419 Haloacid dehalogenase-like hydrolase AM374_RS18330 PF01895 PhoU domain AM374_RS18335 PF00005 ABC transporter AM374_RS18340 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS18345 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS18350 PF12849 PBP superfamily domain AM374_RS18355 PF02378 Phosphotransferase system, EIIC AM374_RS18355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM374_RS18360 PF08501 Shikimate dehydrogenase substrate binding domain AM374_RS18365 PF12793 Sugar transport-related sRNA regulator N-term AM374_RS18365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM374_RS18370 PF01380 SIS domain AM374_RS18375 PF00132 Bacterial transferase hexapeptide (six repeats) AM374_RS18375 PF12804 MobA-like NTP transferase domain AM374_RS18390 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM374_RS18390 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM374_RS18395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM374_RS18395 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM374_RS18400 PF00231 ATP synthase AM374_RS18405 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM374_RS18405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM374_RS18405 PF00306 ATP synthase alpha/beta chain, C terminal domain AM374_RS18410 PF00213 ATP synthase delta (OSCP) subunit AM374_RS18415 PF00430 ATP synthase B/B' CF(0) AM374_RS18420 PF00137 ATP synthase subunit C AM374_RS18425 PF00119 ATP synthase A chain AM374_RS18430 PF03899 ATP synthase I chain AM374_RS18435 PF02527 rRNA small subunit methyltransferase G AM374_RS18440 PF13932 GidA associated domain AM374_RS18440 PF01134 Glucose inhibited division protein A AM374_RS18450 PF00258 Flavodoxin AM374_RS18455 PF01037 Lrp/AsnC ligand binding domain AM374_RS18460 PF03590 Aspartate-ammonia ligase AM374_RS18465 PF05762 VWA domain containing CoxE-like protein AM374_RS18470 PF17868 AAA lid domain AM374_RS18470 PF12592 Protein of unknown function (DUF3763) AM374_RS18470 PF07728 AAA domain (dynein-related subfamily) AM374_RS18475 PF02705 K+ potassium transporter AM374_RS18480 PF05025 RbsD / FucU transport protein family AM374_RS18485 PF00005 ABC transporter AM374_RS18490 PF02653 Branched-chain amino acid transport system / permease component AM374_RS18495 PF13407 Periplasmic binding protein domain AM374_RS18500 PF00294 pfkB family carbohydrate kinase AM374_RS18505 PF00356 Bacterial regulatory proteins, lacI family AM374_RS18510 PF07690 Major Facilitator Superfamily AM374_RS18515 PF00392 Bacterial regulatory proteins, gntR family AM374_RS18515 PF07729 FCD domain AM374_RS18550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS18550 PF03466 LysR substrate binding domain AM374_RS18555 PF04219 Protein of unknown function, DUF AM374_RS18560 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM374_RS18560 PF01078 Magnesium chelatase, subunit ChlI AM374_RS18565 PF08046 IlvGEDA operon leader peptide AM374_RS18570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM374_RS18570 PF00205 Thiamine pyrophosphate enzyme, central domain AM374_RS18570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM374_RS18580 PF01063 Amino-transferase class IV AM374_RS18585 PF00920 Dehydratase family AM374_RS18590 PF00585 C-terminal regulatory domain of Threonine dehydratase AM374_RS18590 PF00291 Pyridoxal-phosphate dependent enzyme AM374_RS18605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS18605 PF03466 LysR substrate binding domain AM374_RS18610 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM374_RS18610 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM374_RS18625 PF01048 Phosphorylase superfamily AM374_RS18630 PF04973 Nicotinamide mononucleotide transporter AM374_RS18635 PF00580 UvrD/REP helicase N-terminal domain AM374_RS18635 PF13361 UvrD-like helicase C-terminal domain AM374_RS18640 PF02541 Ppx/GppA phosphatase family AM374_RS18650 PF00271 Helicase conserved C-terminal domain AM374_RS18650 PF00270 DEAD/DEAH box helicase AM374_RS18655 PF00085 Thioredoxin AM374_RS18665 PF07497 Rho termination factor, RNA-binding domain AM374_RS18665 PF07498 Rho termination factor, N-terminal domain AM374_RS18665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM374_RS18670 PF00953 Glycosyl transferase family 4 AM374_RS18675 PF02706 Chain length determinant protein AM374_RS18680 PF02350 UDP-N-acetylglucosamine 2-epimerase AM374_RS18685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM374_RS18685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM374_RS18685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM374_RS18690 PF16363 GDP-mannose 4,6 dehydratase AM374_RS18695 PF00483 Nucleotidyl transferase AM374_RS18695 PF00483 Nucleotidyl transferase AM374_RS18705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM374_RS18710 PF01943 Polysaccharide biosynthesis protein AM374_RS18715 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AM374_RS18720 PF06899 WzyE protein, O-antigen assembly polymerase AM374_RS18725 PF03808 Glycosyl transferase WecB/TagA/CpsF family AM374_RS18730 PF00324 Amino acid permease AM374_RS18755 PF07219 HemY protein N-terminus AM374_RS18755 PF07719 Tetratricopeptide repeat AM374_RS18760 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AM374_RS18765 PF02602 Uroporphyrinogen-III synthase HemD AM374_RS18770 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM374_RS18770 PF03900 Porphobilinogen deaminase, C-terminal domain AM374_RS18775 PF01295 Adenylate cyclase, class-I AM374_RS18775 PF12633 Adenylate cyclase NT domain AM374_RS18795 PF01491 Frataxin-like domain AM374_RS18815 PF13627 Prokaryotic lipoprotein-attachment site AM374_RS18820 PF01678 Diaminopimelate epimerase AM374_RS18825 PF04340 Protein of unknown function, DUF484 AM374_RS18830 PF00589 Phage integrase family AM374_RS18830 PF02899 Phage integrase, N-terminal SAM-like domain AM374_RS18835 PF13419 Haloacid dehalogenase-like hydrolase AM374_RS18840 PF13361 UvrD-like helicase C-terminal domain AM374_RS18840 PF00580 UvrD/REP helicase N-terminal domain AM374_RS18850 PF01544 CorA-like Mg2+ transporter protein AM374_RS18855 PF10947 Protein of unknown function (DUF2628) AM374_RS18865 PF00892 EamA-like transporter family AM374_RS18870 PF03061 Thioesterase superfamily AM374_RS18875 PF02253 Phospholipase A1 AM374_RS18880 PF09382 RQC domain AM374_RS18880 PF16124 RecQ zinc-binding AM374_RS18880 PF00570 HRDC domain AM374_RS18880 PF00270 DEAD/DEAH box helicase AM374_RS18880 PF00271 Helicase conserved C-terminal domain AM374_RS18885 PF01810 LysE type translocator AM374_RS18890 PF01810 LysE type translocator AM374_RS18895 PF12146 Serine aminopeptidase, S33 AM374_RS18905 PF00892 EamA-like transporter family AM374_RS18910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS18910 PF03466 LysR substrate binding domain AM374_RS18915 PF01717 Cobalamin-independent synthase, Catalytic domain AM374_RS18915 PF08267 Cobalamin-independent synthase, N-terminal domain AM374_RS18920 PF13186 Iron-sulfur cluster-binding domain AM374_RS18920 PF04055 Radical SAM superfamily AM374_RS18925 PF01738 Dienelactone hydrolase family AM374_RS18930 PF01048 Phosphorylase superfamily AM374_RS18935 PF02646 RmuC family AM374_RS18940 PF01209 ubiE/COQ5 methyltransferase family AM374_RS18945 PF02036 SCP-2 sterol transfer family AM374_RS18950 PF03109 ABC1 family AM374_RS18955 PF02416 mttA/Hcf106 family AM374_RS18965 PF00902 Sec-independent protein translocase protein (TatC) AM374_RS18970 PF01026 TatD related DNase AM374_RS18975 PF02357 Transcription termination factor nusG AM374_RS18980 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM374_RS18985 PF00970 Oxidoreductase FAD-binding domain AM374_RS18985 PF00175 Oxidoreductase NAD-binding domain AM374_RS18990 PF05935 Arylsulfotransferase (ASST) AM374_RS18990 PF17425 Arylsulfotransferase Ig-like domain AM374_RS18995 PF02803 Thiolase, C-terminal domain AM374_RS18995 PF00108 Thiolase, N-terminal domain AM374_RS19000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM374_RS19000 PF00378 Enoyl-CoA hydratase/isomerase AM374_RS19000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM374_RS19005 PF00557 Metallopeptidase family M24 AM374_RS19010 PF09186 Domain of unknown function (DUF1949) AM374_RS19010 PF01205 Uncharacterized protein family UPF0029 AM374_RS19015 PF02386 Cation transport protein AM374_RS19020 PF12724 Flavodoxin domain AM374_RS19055 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AM374_RS19060 PF12804 MobA-like NTP transferase domain AM374_RS19065 PF06288 Protein of unknown function (DUF1040) AM374_RS19070 PF01636 Phosphotransferase enzyme family AM374_RS19075 PF01323 DSBA-like thioredoxin domain AM374_RS19080 PF01553 Acyltransferase AM374_RS19090 PF01612 3'-5' exonuclease AM374_RS19090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM374_RS19090 PF01367 5'-3' exonuclease, C-terminal SAM fold AM374_RS19090 PF00476 DNA polymerase family A AM374_RS19095 PF01926 50S ribosome-binding GTPase AM374_RS19105 PF04220 Der GTPase activator (YihI) AM374_RS19110 PF04055 Radical SAM superfamily AM374_RS19110 PF06969 HemN C-terminal domain AM374_RS19120 PF00158 Sigma-54 interaction domain AM374_RS19120 PF02954 Bacterial regulatory protein, Fis family AM374_RS19120 PF00072 Response regulator receiver domain AM374_RS19125 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS19125 PF00989 PAS fold AM374_RS19125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS19135 PF00120 Glutamine synthetase, catalytic domain AM374_RS19135 PF03951 Glutamine synthetase, beta-Grasp domain AM374_RS19145 PF03144 Elongation factor Tu domain 2 AM374_RS19145 PF00009 Elongation factor Tu GTP binding domain AM374_RS19145 PF00679 Elongation factor G C-terminus AM374_RS19160 PF04055 Radical SAM superfamily AM374_RS19180 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM374_RS19195 PF01055 Glycosyl hydrolases family 31 AM374_RS19200 PF01263 Aldose 1-epimerase AM374_RS19210 PF01791 DeoC/LacD family aldolase AM374_RS19215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM374_RS19215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM374_RS19220 PF00294 pfkB family carbohydrate kinase AM374_RS19225 PF00455 DeoR C terminal sensor domain AM374_RS19225 PF08220 DeoR-like helix-turn-helix domain AM374_RS19230 PF13419 Haloacid dehalogenase-like hydrolase AM374_RS19235 PF03631 Virulence factor BrkB AM374_RS19240 PF02580 D-Tyr-tRNA(Tyr) deacylase AM374_RS19250 PF01381 Helix-turn-helix AM374_RS19255 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AM374_RS19260 PF07859 alpha/beta hydrolase fold AM374_RS19265 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AM374_RS19275 PF04216 Protein involved in formate dehydrogenase formation AM374_RS19280 PF01292 Prokaryotic cytochrome b561 AM374_RS19285 PF13247 4Fe-4S dicluster domain AM374_RS19285 PF09163 Formate dehydrogenase N, transmembrane AM374_RS19295 PF02634 FdhD/NarQ family AM374_RS19300 PF12889 Protein of unknown function (DUF3829) AM374_RS19305 PF12889 Protein of unknown function (DUF3829) AM374_RS19315 PF03591 AzlC protein AM374_RS19325 PF05336 L-rhamnose mutarotase AM374_RS19330 PF00465 Iron-containing alcohol dehydrogenase AM374_RS19335 PF00596 Class II Aldolase and Adducin N-terminal domain AM374_RS19340 PF06134 L-rhamnose isomerase (RhaA) AM374_RS19345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM374_RS19345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM374_RS19350 PF02311 AraC-like ligand binding domain AM374_RS19350 PF12833 Helix-turn-helix domain AM374_RS19360 PF12833 Helix-turn-helix domain AM374_RS19360 PF02311 AraC-like ligand binding domain AM374_RS19365 PF06379 L-rhamnose-proton symport protein (RhaT) AM374_RS19370 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM374_RS19375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM374_RS19380 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AM374_RS19385 PF03480 Bacterial extracellular solute-binding protein, family 7 AM374_RS19390 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM374_RS19390 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM374_RS19395 PF03475 3-alpha domain AM374_RS19395 PF03473 MOSC domain AM374_RS19410 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS19410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS19410 PF00672 HAMP domain AM374_RS19410 PF16527 Two-component sensor protein CpxA, periplasmic domain AM374_RS19415 PF00072 Response regulator receiver domain AM374_RS19415 PF00486 Transcriptional regulatory protein, C terminal AM374_RS19420 PF07813 LTXXQ motif family protein AM374_RS19425 PF01545 Cation efflux family AM374_RS19425 PF16916 Dimerisation domain of Zinc Transporter AM374_RS19430 PF00365 Phosphofructokinase AM374_RS19445 PF00893 Small Multidrug Resistance protein AM374_RS19450 PF08212 Lipocalin-like domain AM374_RS19455 PF00144 Beta-lactamase AM374_RS19485 PF00294 pfkB family carbohydrate kinase AM374_RS19495 PF00155 Aminotransferase class I and II AM374_RS19495 PF00392 Bacterial regulatory proteins, gntR family AM374_RS19515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM374_RS19515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM374_RS19520 PF04198 Putative sugar-binding domain AM374_RS19525 PF00005 ABC transporter AM374_RS19530 PF02653 Branched-chain amino acid transport system / permease component AM374_RS19535 PF02653 Branched-chain amino acid transport system / permease component AM374_RS19540 PF13407 Periplasmic binding protein domain AM374_RS19545 PF01791 DeoC/LacD family aldolase AM374_RS19550 PF03992 Antibiotic biosynthesis monooxygenase AM374_RS19555 PF00834 Ribulose-phosphate 3 epimerase family AM374_RS19560 PF00121 Triosephosphate isomerase AM374_RS19565 PF07305 Protein of unknown function (DUF1454) AM374_RS19570 PF05656 Protein of unknown function (DUF805) AM374_RS19575 PF00970 Oxidoreductase FAD-binding domain AM374_RS19575 PF00175 Oxidoreductase NAD-binding domain AM374_RS19580 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM374_RS19585 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM374_RS19585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM374_RS19590 PF00230 Major intrinsic protein AM374_RS19595 PF06005 Cell division protein ZapB AM374_RS19600 PF03737 Aldolase/RraA AM374_RS19605 PF01040 UbiA prenyltransferase family AM374_RS19610 PF00004 ATPase family associated with various cellular activities (AAA) AM374_RS19610 PF07724 AAA domain (Cdc48 subfamily) AM374_RS19610 PF10431 C-terminal, D2-small domain, of ClpB protein AM374_RS19615 PF00227 Proteasome subunit AM374_RS19620 PF05036 Sporulation related domain AM374_RS19625 PF00356 Bacterial regulatory proteins, lacI family AM374_RS19630 PF00270 DEAD/DEAH box helicase AM374_RS19630 PF00271 Helicase conserved C-terminal domain AM374_RS19630 PF17764 3′ DNA-binding domain (3′BD) AM374_RS19630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM374_RS19630 PF18074 Primosomal protein N C-terminal domain AM374_RS19635 PF01197 Ribosomal protein L31 AM374_RS19640 PF05593 RHS Repeat AM374_RS19640 PF14220 Domain of unknown function (DUF4329) AM374_RS19640 PF03527 RHS protein AM374_RS19665 PF01340 Met Apo-repressor, MetJ AM374_RS19670 PF01053 Cys/Met metabolism PLP-dependent enzyme AM374_RS19675 PF03447 Homoserine dehydrogenase, NAD binding domain AM374_RS19675 PF00742 Homoserine dehydrogenase AM374_RS19675 PF00696 Amino acid kinase family AM374_RS19680 PF05552 Conserved TM helix AM374_RS19680 PF00924 Mechanosensitive ion channel AM374_RS19695 PF02872 5'-nucleotidase, C-terminal domain AM374_RS19695 PF17936 Bacterial Ig domain AM374_RS19695 PF00149 Calcineurin-like phosphoesterase AM374_RS19700 PF02219 Methylenetetrahydrofolate reductase AM374_RS19705 PF00141 Peroxidase AM374_RS19710 PF06940 Domain of unknown function (DUF1287) AM374_RS19715 PF00465 Iron-containing alcohol dehydrogenase AM374_RS19720 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM374_RS19725 PF12833 Helix-turn-helix domain AM374_RS19730 PF00884 Sulfatase AM374_RS19735 PF00311 Phosphoenolpyruvate carboxylase AM374_RS19745 PF07687 Peptidase dimerisation domain AM374_RS19745 PF01546 Peptidase family M20/M25/M40 AM374_RS19750 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM374_RS19750 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM374_RS19755 PF00696 Amino acid kinase family AM374_RS19760 PF14698 Argininosuccinate lyase C-terminal AM374_RS19760 PF00206 Lyase AM374_RS19770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS19770 PF03466 LysR substrate binding domain AM374_RS19775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS19775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM374_RS19785 PF00440 Bacterial regulatory proteins, tetR family AM374_RS19790 PF07226 Protein of unknown function (DUF1422) AM374_RS19795 PF05958 tRNA (Uracil-5-)-methyltransferase AM374_RS19800 PF07715 TonB-dependent Receptor Plug Domain AM374_RS19800 PF00593 TonB dependent receptor AM374_RS19805 PF01177 Asp/Glu/Hydantoin racemase AM374_RS19835 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM374_RS19835 PF01565 FAD binding domain AM374_RS19840 PF02237 Biotin protein ligase C terminal domain AM374_RS19840 PF03099 Biotin/lipoate A/B protein ligase family AM374_RS19840 PF08279 HTH domain AM374_RS19845 PF00485 Phosphoribulokinase / Uridine kinase family AM374_RS19875 PF00009 Elongation factor Tu GTP binding domain AM374_RS19875 PF03144 Elongation factor Tu domain 2 AM374_RS19875 PF03143 Elongation factor Tu C-terminal domain AM374_RS19880 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM374_RS19885 PF02357 Transcription termination factor nusG AM374_RS19885 PF00467 KOW motif AM374_RS19890 PF03946 Ribosomal protein L11, N-terminal domain AM374_RS19890 PF00298 Ribosomal protein L11, RNA binding domain AM374_RS19895 PF00687 Ribosomal protein L1p/L10e family AM374_RS19905 PF00466 Ribosomal protein L10 AM374_RS19910 PF16320 Ribosomal protein L7/L12 dimerisation domain AM374_RS19910 PF00542 Ribosomal protein L7/L12 C-terminal domain AM374_RS19915 PF10385 RNA polymerase beta subunit external 1 domain AM374_RS19915 PF04560 RNA polymerase Rpb2, domain 7 AM374_RS19915 PF04561 RNA polymerase Rpb2, domain 2 AM374_RS19915 PF04565 RNA polymerase Rpb2, domain 3 AM374_RS19915 PF00562 RNA polymerase Rpb2, domain 6 AM374_RS19915 PF04563 RNA polymerase beta subunit AM374_RS19920 PF04998 RNA polymerase Rpb1, domain 5 AM374_RS19920 PF05000 RNA polymerase Rpb1, domain 4 AM374_RS19920 PF04983 RNA polymerase Rpb1, domain 3 AM374_RS19920 PF00623 RNA polymerase Rpb1, domain 2 AM374_RS19920 PF04997 RNA polymerase Rpb1, domain 1 AM374_RS19945 PF04055 Radical SAM superfamily AM374_RS19945 PF06968 Biotin and Thiamin Synthesis associated domain AM374_RS19950 PF05690 Thiazole biosynthesis protein ThiG AM374_RS19955 PF02597 ThiS family AM374_RS19960 PF00899 ThiF family AM374_RS19965 PF02581 Thiamine monophosphate synthase AM374_RS19970 PF13667 ThiC-associated domain AM374_RS19970 PF01964 Radical SAM ThiC family AM374_RS19975 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AM374_RS19980 PF00293 NUDIX domain AM374_RS19980 PF09297 NADH pyrophosphatase zinc ribbon domain AM374_RS19985 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM374_RS19990 PF04493 Endonuclease V AM374_RS19995 PF04222 Protein of unknown function (DUF416) AM374_RS20000 PF00216 Bacterial DNA-binding protein AM374_RS20005 PF07356 Protein of unknown function (DUF1481) AM374_RS20010 PF13801 Heavy-metal resistance AM374_RS20015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS20015 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS20020 PF00158 Sigma-54 interaction domain AM374_RS20020 PF00072 Response regulator receiver domain AM374_RS20020 PF02954 Bacterial regulatory protein, Fis family AM374_RS20025 PF02843 Phosphoribosylglycinamide synthetase, C domain AM374_RS20025 PF02844 Phosphoribosylglycinamide synthetase, N domain AM374_RS20025 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM374_RS20030 PF02142 MGS-like domain AM374_RS20030 PF01808 AICARFT/IMPCHase bienzyme AM374_RS20055 PF13673 Acetyltransferase (GNAT) domain AM374_RS20060 PF04204 Homoserine O-succinyltransferase AM374_RS20065 PF01274 Malate synthase AM374_RS20070 PF00463 Isocitrate lyase family AM374_RS20075 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM374_RS20085 PF09339 IclR helix-turn-helix domain AM374_RS20085 PF01614 Bacterial transcriptional regulator AM374_RS20090 PF02310 B12 binding domain AM374_RS20090 PF00809 Pterin binding enzyme AM374_RS20090 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM374_RS20090 PF02607 B12 binding domain AM374_RS20090 PF02574 Homocysteine S-methyltransferase AM374_RS20095 PF02690 Na+/Pi-cotransporter AM374_RS20100 PF03575 Peptidase family S51 AM374_RS20110 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM374_RS20115 PF01479 S4 domain AM374_RS20115 PF00849 RNA pseudouridylate synthase AM374_RS20120 PF11656 YjbD family (DUF3811) AM374_RS20125 PF01758 Sodium Bile acid symporter family AM374_RS20145 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM374_RS20150 PF07484 Phage Tail Collar Domain AM374_RS20150 PF03335 Phage tail fibre repeat AM374_RS20175 PF00535 Glycosyl transferase family 2 AM374_RS20180 PF04138 GtrA-like protein AM374_RS20255 PF08765 Mor transcription activator family AM374_RS20260 PF00696 Amino acid kinase family AM374_RS20260 PF01842 ACT domain AM374_RS20265 PF00342 Phosphoglucose isomerase AM374_RS20275 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AM374_RS20280 PF06251 Capsule biosynthesis GfcC AM374_RS20285 PF06082 Exopolysaccharide biosynthesis protein YbjH AM374_RS20290 PF06146 Phosphate-starvation-inducible E AM374_RS20295 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS20300 PF14785 Maltose transport system permease protein MalF P2 domain AM374_RS20300 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS20305 PF01547 Bacterial extracellular solute-binding protein AM374_RS20310 PF17912 MalK OB fold domain AM374_RS20310 PF00005 ABC transporter AM374_RS20315 PF02264 LamB porin AM374_RS20320 PF07148 Maltose operon periplasmic protein precursor (MalM) AM374_RS20325 PF04345 Chorismate lyase AM374_RS20330 PF01040 UbiA prenyltransferase family AM374_RS20335 PF01553 Acyltransferase AM374_RS20340 PF01219 Prokaryotic diacylglycerol kinase AM374_RS20345 PF00717 Peptidase S24-like AM374_RS20345 PF01726 LexA DNA binding domain AM374_RS20350 PF01554 MatE AM374_RS20360 PF05532 CsbD-like AM374_RS20365 PF01475 Ferric uptake regulator family AM374_RS20375 PF01207 Dihydrouridine synthase (Dus) AM374_RS20380 PF09583 Phage shock protein G (Phageshock_PspG) AM374_RS20385 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS20385 PF00107 Zinc-binding dehydrogenase AM374_RS20390 PF00772 DnaB-like helicase N terminal domain AM374_RS20390 PF03796 DnaB-like helicase C terminal domain AM374_RS20395 PF00842 Alanine racemase, C-terminal domain AM374_RS20395 PF01168 Alanine racemase, N-terminal domain AM374_RS20400 PF00155 Aminotransferase class I and II AM374_RS20410 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM374_RS20415 PF01894 Uncharacterised protein family UPF0047 AM374_RS20420 PF04237 YjbR AM374_RS20435 PF17760 UvrA interaction domain AM374_RS20435 PF00005 ABC transporter AM374_RS20435 PF17755 UvrA DNA-binding domain AM374_RS20445 PF00436 Single-strand binding protein family AM374_RS20485 PF00005 ABC transporter AM374_RS20485 PF00664 ABC transporter transmembrane region AM374_RS20490 PF15940 Family of unknown function AM374_RS20495 PF00563 EAL domain AM374_RS20495 PF12792 CSS motif domain associated with EAL AM374_RS20500 PF12833 Helix-turn-helix domain AM374_RS20505 PF09278 MerR, DNA binding AM374_RS20505 PF00376 MerR family regulatory protein AM374_RS20520 PF00860 Permease family AM374_RS20530 PF00999 Sodium/hydrogen exchanger family AM374_RS20535 PF03466 LysR substrate binding domain AM374_RS20535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS20540 PF03788 LrgA family AM374_RS20545 PF04172 LrgB-like family AM374_RS20550 PF00474 Sodium:solute symporter family AM374_RS20555 PF04341 Protein of unknown function, DUF485 AM374_RS20560 PF00501 AMP-binding enzyme AM374_RS20560 PF16177 Acetyl-coenzyme A synthetase N-terminus AM374_RS20560 PF13193 AMP-binding enzyme C-terminal domain AM374_RS20570 PF02335 Cytochrome c552 AM374_RS20575 PF13435 Cytochrome c554 and c-prime AM374_RS20575 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AM374_RS20580 PF13247 4Fe-4S dicluster domain AM374_RS20580 PF00037 4Fe-4S binding domain AM374_RS20585 PF03916 Polysulphide reductase, NrfD AM374_RS20590 PF01578 Cytochrome C assembly protein AM374_RS20590 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM374_RS20595 PF03918 Cytochrome C biogenesis protein AM374_RS20605 PF00375 Sodium:dicarboxylate symporter family AM374_RS20610 PF08238 Sel1 repeat AM374_RS20625 PF00583 Acetyltransferase (GNAT) family AM374_RS20630 PF06983 3-demethylubiquinone-9 3-methyltransferase AM374_RS20635 PF08274 PhnA Zinc-Ribbon AM374_RS20635 PF03831 PhnA domain AM374_RS20640 PF00083 Sugar (and other) transporter AM374_RS20640 PF08946 Osmosensory transporter coiled coil AM374_RS20650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS20650 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS20655 PF00072 Response regulator receiver domain AM374_RS20655 PF00486 Transcriptional regulatory protein, C terminal AM374_RS20660 PF08019 Phosphoethanolamine transferase EptA/EptB AM374_RS20660 PF00884 Sulfatase AM374_RS20665 PF13520 Amino acid permease AM374_RS20670 PF12833 Helix-turn-helix domain AM374_RS20675 PF01276 Orn/Lys/Arg decarboxylase, major domain AM374_RS20675 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM374_RS20675 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM374_RS20680 PF12833 Helix-turn-helix domain AM374_RS20685 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM374_RS20685 PF02056 Family 4 glycosyl hydrolase AM374_RS20695 PF05683 Fumarase C-terminus AM374_RS20695 PF05681 Fumarate hydratase (Fumerase) AM374_RS20700 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM374_RS20710 PF00072 Response regulator receiver domain AM374_RS20715 PF00989 PAS fold AM374_RS20715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS20715 PF17203 Single cache domain 3 AM374_RS20715 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM374_RS20720 PF00384 Molybdopterin oxidoreductase AM374_RS20720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS20720 PF01568 Molydopterin dinucleotide binding domain AM374_RS20725 PF13247 4Fe-4S dicluster domain AM374_RS20725 PF12800 4Fe-4S binding domain AM374_RS20730 PF04976 DMSO reductase anchor subunit (DmsC) AM374_RS20735 PF02613 Nitrate reductase delta subunit AM374_RS20745 PF06977 SdiA-regulated AM374_RS20760 PF09383 NIL domain AM374_RS20760 PF00005 ABC transporter AM374_RS20765 PF00072 Response regulator receiver domain AM374_RS20765 PF00196 Bacterial regulatory proteins, luxR family AM374_RS20770 PF12833 Helix-turn-helix domain AM374_RS20800 PF01569 PAP2 superfamily AM374_RS20810 PF03830 PTS system sorbose subfamily IIB component AM374_RS20810 PF03610 PTS system fructose IIA component AM374_RS20815 PF03830 PTS system sorbose subfamily IIB component AM374_RS20825 PF03613 PTS system mannose/fructose/sorbose family IID component AM374_RS20830 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS20830 PF00107 Zinc-binding dehydrogenase AM374_RS20835 PF01380 SIS domain AM374_RS20840 PF00107 Zinc-binding dehydrogenase AM374_RS20840 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS20845 PF00834 Ribulose-phosphate 3 epimerase family AM374_RS20850 PF00874 PRD domain AM374_RS20850 PF03610 PTS system fructose IIA component AM374_RS20850 PF00158 Sigma-54 interaction domain AM374_RS20875 PF02683 Cytochrome C biogenesis protein transmembrane region AM374_RS20875 PF11412 Disulphide bond corrector protein DsbC AM374_RS20880 PF03091 CutA1 divalent ion tolerance protein AM374_RS20885 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM374_RS20890 PF00206 Lyase AM374_RS20890 PF10415 Fumarase C C-terminus AM374_RS20895 PF04186 FxsA cytoplasmic membrane protein AM374_RS20900 PF13520 Amino acid permease AM374_RS20905 PF00166 Chaperonin 10 Kd subunit AM374_RS20910 PF00118 TCP-1/cpn60 chaperonin family AM374_RS20915 PF13698 Domain of unknown function (DUF4156) AM374_RS20920 PF15922 YjeJ-like AM374_RS20925 PF04055 Radical SAM superfamily AM374_RS20930 PF01132 Elongation factor P (EF-P) OB domain AM374_RS20930 PF08207 Elongation factor P (EF-P) KOW-like domain AM374_RS20930 PF09285 Elongation factor P, C-terminal AM374_RS20935 PF08085 Entericidin EcnA/B family AM374_RS20945 PF08085 Entericidin EcnA/B family AM374_RS20950 PF00196 Bacterial regulatory proteins, luxR family AM374_RS20955 PF00893 Small Multidrug Resistance protein AM374_RS20960 PF08212 Lipocalin-like domain AM374_RS20965 PF02313 Fumarate reductase subunit D AM374_RS20970 PF02300 Fumarate reductase subunit C AM374_RS20975 PF13183 4Fe-4S dicluster domain AM374_RS20975 PF13085 2Fe-2S iron-sulfur cluster binding domain AM374_RS20980 PF02910 Fumarate reductase flavoprotein C-term AM374_RS20980 PF00890 FAD binding domain AM374_RS20985 PF00152 tRNA synthetases class II (D, K and N) AM374_RS20990 PF13520 Amino acid permease AM374_RS20995 PF10840 Protein of unknown function (DUF2645) AM374_RS21000 PF12795 Mechanosensitive ion channel porin domain AM374_RS21000 PF00924 Mechanosensitive ion channel AM374_RS21000 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM374_RS21005 PF02666 Phosphatidylserine decarboxylase AM374_RS21010 PF03193 RsgA GTPase AM374_RS21015 PF00929 Exonuclease AM374_RS21020 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM374_RS21040 PF08331 Domain of unknown function (DUF1730) AM374_RS21045 PF01256 Carbohydrate kinase AM374_RS21045 PF03853 YjeF-related protein N-terminus AM374_RS21050 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM374_RS21055 PF01520 N-acetylmuramoyl-L-alanine amidase AM374_RS21060 PF01119 DNA mismatch repair protein, C-terminal domain AM374_RS21060 PF08676 MutL C terminal dimerisation domain AM374_RS21070 PF17209 Hfq protein AM374_RS21075 PF01926 50S ribosome-binding GTPase AM374_RS21075 PF13167 GTP-binding GTPase N-terminal AM374_RS21075 PF16360 GTP-binding GTPase Middle Region AM374_RS21080 PF01145 SPFH domain / Band 7 family AM374_RS21080 PF12221 Bacterial membrane protein N terminal AM374_RS21085 PF01145 SPFH domain / Band 7 family AM374_RS21090 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AM374_RS21095 PF00709 Adenylosuccinate synthetase AM374_RS21100 PF02082 Transcriptional regulator AM374_RS21105 PF08461 Ribonuclease R winged-helix domain AM374_RS21105 PF17876 Cold shock domain AM374_RS21105 PF00773 RNB domain AM374_RS21105 PF08206 Ribonuclease B OB domain AM374_RS21105 PF00575 S1 RNA binding domain AM374_RS21110 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM374_RS21110 PF00588 SpoU rRNA Methylase family AM374_RS21115 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) AM374_RS21120 PF04012 PspA/IM30 family AM374_RS21130 PF10679 Protein of unknown function (DUF2491) AM374_RS21135 PF03994 Domain of Unknown Function (DUF350) AM374_RS21140 PF06693 Protein of unknown function (DUF1190) AM374_RS21145 PF03738 Glutathionylspermidine synthase preATP-grasp AM374_RS21150 PF18158 Adaptive response protein AidB N-terminal domain AM374_RS21150 PF02770 Acyl-CoA dehydrogenase, middle domain AM374_RS21150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM374_RS21155 PF07338 Protein of unknown function (DUF1471) AM374_RS21160 PF07338 Protein of unknown function (DUF1471) AM374_RS21165 PF00326 Prolyl oligopeptidase family AM374_RS21170 PF00455 DeoR C terminal sensor domain AM374_RS21170 PF08220 DeoR-like helix-turn-helix domain AM374_RS21180 PF03611 PTS system sugar-specific permease component AM374_RS21185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM374_RS21190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM374_RS21195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM374_RS21200 PF01261 Xylose isomerase-like TIM barrel AM374_RS21205 PF00596 Class II Aldolase and Adducin N-terminal domain AM374_RS21210 PF07274 Protein of unknown function (DUF1440) AM374_RS21215 PF07338 Protein of unknown function (DUF1471) AM374_RS21220 PF01250 Ribosomal protein S6 AM374_RS21225 PF00436 Single-strand binding protein family AM374_RS21230 PF01084 Ribosomal protein S18 AM374_RS21235 PF01281 Ribosomal protein L9, N-terminal domain AM374_RS21235 PF03948 Ribosomal protein L9, C-terminal domain AM374_RS21245 PF08525 Opacity-associated protein A N-terminal motif AM374_RS21245 PF04225 Opacity-associated protein A LysM-like domain AM374_RS21255 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM374_RS21255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM374_RS21260 PF00324 Amino acid permease AM374_RS21265 PF01814 Hemerythrin HHE cation binding domain AM374_RS21265 PF04405 Domain of Unknown function (DUF542) AM374_RS21270 PF00892 EamA-like transporter family AM374_RS21275 PF05368 NmrA-like family AM374_RS21280 PF01638 HxlR-like helix-turn-helix AM374_RS21285 PF00149 Calcineurin-like phosphoesterase AM374_RS21285 PF02872 5'-nucleotidase, C-terminal domain AM374_RS21295 PF00459 Inositol monophosphatase family AM374_RS21300 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM374_RS21310 PF06526 Protein of unknown function (DUF1107) AM374_RS21315 PF00571 CBS domain AM374_RS21315 PF03471 Transporter associated domain AM374_RS21315 PF01595 Cyclin M transmembrane N-terminal domain AM374_RS21320 PF01625 Peptide methionine sulfoxide reductase AM374_RS21325 PF07244 Surface antigen variable number repeat AM374_RS21325 PF17243 POTRA domain TamA domain 1 AM374_RS21325 PF01103 Surface antigen AM374_RS21330 PF04357 TamB, inner membrane protein subunit of TAM complex AM374_RS21335 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AM374_RS21340 PF07690 Major Facilitator Superfamily AM374_RS21345 PF01979 Amidohydrolase family AM374_RS21350 PF00719 Inorganic pyrophosphatase AM374_RS21355 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM374_RS21360 PF01225 Mur ligase family, catalytic domain AM374_RS21360 PF08245 Mur ligase middle domain AM374_RS21360 PF02875 Mur ligase family, glutamate ligase domain AM374_RS21365 PF04751 Protein of unknown function (DUF615) AM374_RS21370 PF01523 Putative modulator of DNA gyrase AM374_RS21375 PF07361 Cytochrome b562 AM374_RS21405 PF01979 Amidohydrolase family AM374_RS21410 PF03841 L-seryl-tRNA selenium transferase AM374_RS21415 PF07071 KDGP aldolase AM374_RS21420 PF08279 HTH domain AM374_RS21420 PF05043 Mga helix-turn-helix domain AM374_RS21420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM374_RS21420 PF00874 PRD domain AM374_RS21425 PF04221 RelB antitoxin AM374_RS21430 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AM374_RS21440 PF13597 Anaerobic ribonucleoside-triphosphate reductase AM374_RS21440 PF03477 ATP cone domain AM374_RS21445 PF11941 Domain of unknown function (DUF3459) AM374_RS21445 PF00128 Alpha amylase, catalytic domain AM374_RS21450 PF02378 Phosphotransferase system, EIIC AM374_RS21450 PF00367 phosphotransferase system, EIIB AM374_RS21455 PF00356 Bacterial regulatory proteins, lacI family AM374_RS21460 PF17059 MgtA leader peptide AM374_RS21465 PF00689 Cation transporting ATPase, C-terminus AM374_RS21465 PF00690 Cation transporter/ATPase, N-terminus AM374_RS21475 PF01042 Endoribonuclease L-PSP AM374_RS21480 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AM374_RS21480 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AM374_RS21485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM374_RS21485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM374_RS21490 PF08052 PyrBI operon leader peptide AM374_RS21500 PF02863 Arginine repressor, C-terminal domain AM374_RS21500 PF01316 Arginine repressor, DNA binding domain AM374_RS21505 PF03606 C4-dicarboxylate anaerobic carrier AM374_RS21510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM374_RS21510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM374_RS21515 PF00696 Amino acid kinase family AM374_RS21535 PF04074 YhcH/YjgK/YiaL AM374_RS21540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM374_RS21540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM374_RS21545 PF06877 Regulator of ribonuclease activity B AM374_RS21550 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AM374_RS21555 PF12276 Protein of unknown function (DUF3617) AM374_RS21560 PF02371 Transposase IS116/IS110/IS902 family AM374_RS21560 PF01548 Transposase AM374_RS21565 PF00583 Acetyltransferase (GNAT) family AM374_RS21570 PF05987 Bacterial protein of unknown function (DUF898) AM374_RS21575 PF08264 Anticodon-binding domain of tRNA AM374_RS21575 PF10458 Valyl tRNA synthetase tRNA binding arm AM374_RS21575 PF00133 tRNA synthetases class I (I, L, M and V) AM374_RS21580 PF04364 DNA polymerase III chi subunit, HolC AM374_RS21585 PF02789 Cytosol aminopeptidase family, N-terminal domain AM374_RS21585 PF00883 Cytosol aminopeptidase family, catalytic domain AM374_RS21600 PF03739 Lipopolysaccharide export system permease LptF/LptG AM374_RS21605 PF03739 Lipopolysaccharide export system permease LptF/LptG AM374_RS21610 PF00356 Bacterial regulatory proteins, lacI family AM374_RS21615 PF02447 GntP family permease AM374_RS21620 PF00106 short chain dehydrogenase AM374_RS21625 PF00107 Zinc-binding dehydrogenase AM374_RS21625 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS21630 PF01202 Shikimate kinase AM374_RS21635 PF00107 Zinc-binding dehydrogenase AM374_RS21635 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS21645 PF00589 Phage integrase family AM374_RS21645 PF13356 Arm DNA-binding domain AM374_RS21725 PF01709 Transcriptional regulator AM374_RS21735 PF13847 Methyltransferase domain AM374_RS21740 PF09857 Putative toxin of bacterial toxin-antitoxin pair AM374_RS21765 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM374_RS21765 PF03625 Domain of unknown function DUF302 AM374_RS21770 PF01738 Dienelactone hydrolase family AM374_RS21780 PF07729 FCD domain AM374_RS21780 PF00392 Bacterial regulatory proteins, gntR family AM374_RS21785 PF00579 tRNA synthetases class I (W and Y) AM374_RS21800 PF01177 Asp/Glu/Hydantoin racemase AM374_RS21805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS21805 PF03466 LysR substrate binding domain AM374_RS21810 PF01979 Amidohydrolase family AM374_RS21815 PF07670 Nucleoside recognition AM374_RS21820 PF07670 Nucleoside recognition AM374_RS21825 PF06779 Uncharacterised MFS-type transporter YbfB AM374_RS21830 PF04286 Protein of unknown function (DUF445) AM374_RS21835 PF07690 Major Facilitator Superfamily AM374_RS21840 PF04754 Putative transposase, YhgA-like AM374_RS21845 PF00171 Aldehyde dehydrogenase family AM374_RS21875 PF09857 Putative toxin of bacterial toxin-antitoxin pair AM374_RS21900 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM374_RS21900 PF03625 Domain of unknown function DUF302 AM374_RS21905 PF01738 Dienelactone hydrolase family AM374_RS21915 PF00392 Bacterial regulatory proteins, gntR family AM374_RS21915 PF07729 FCD domain AM374_RS21920 PF00579 tRNA synthetases class I (W and Y) AM374_RS21935 PF01177 Asp/Glu/Hydantoin racemase AM374_RS21940 PF03466 LysR substrate binding domain AM374_RS21940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS21945 PF01979 Amidohydrolase family AM374_RS21950 PF07670 Nucleoside recognition AM374_RS21955 PF07670 Nucleoside recognition AM374_RS21960 PF06779 Uncharacterised MFS-type transporter YbfB AM374_RS21965 PF04286 Protein of unknown function (DUF445) AM374_RS21970 PF07690 Major Facilitator Superfamily AM374_RS21975 PF04754 Putative transposase, YhgA-like AM374_RS21980 PF00171 Aldehyde dehydrogenase family AM374_RS22000 PF01810 LysE type translocator AM374_RS22005 PF12833 Helix-turn-helix domain AM374_RS22005 PF02311 AraC-like ligand binding domain AM374_RS22010 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM374_RS22010 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM374_RS22015 PF04328 Selenoprotein, putative AM374_RS22020 PF02554 Carbon starvation protein CstA AM374_RS22020 PF13722 5TM C-terminal transporter carbon starvation CstA AM374_RS22025 PF00672 HAMP domain AM374_RS22025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM374_RS22025 PF02203 Tar ligand binding domain homologue AM374_RS22030 PF00884 Sulfatase AM374_RS22035 PF10696 Protein of unknown function (DUF2501) AM374_RS22040 PF01695 IstB-like ATP binding protein AM374_RS22045 PF17948 DnaT DNA-binding domain AM374_RS22050 PF12821 Threonine/Serine exporter, ThrE AM374_RS22055 PF06738 Putative threonine/serine exporter AM374_RS22060 PF00196 Bacterial regulatory proteins, luxR family AM374_RS22065 PF00196 Bacterial regulatory proteins, luxR family AM374_RS22070 PF04073 Aminoacyl-tRNA editing domain AM374_RS22075 PF06276 Ferric iron reductase FhuF-like transporter AM374_RS22075 PF11575 FhuF 2Fe-2S C-terminal domain AM374_RS22080 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS22080 PF05230 MASE2 domain AM374_RS22085 PF07256 Protein of unknown function (DUF1435) AM374_RS22105 PF08468 Methyltransferase small domain N-terminal AM374_RS22105 PF05175 Methyltransferase small domain AM374_RS22110 PF03603 DNA polymerase III psi subunit AM374_RS22115 PF00583 Acetyltransferase (GNAT) family AM374_RS22120 PF13419 Haloacid dehalogenase-like hydrolase AM374_RS22125 PF16658 Class II release factor RF3, C-terminal domain AM374_RS22125 PF00009 Elongation factor Tu GTP binding domain AM374_RS22125 PF03144 Elongation factor Tu domain 2 AM374_RS22130 PF04972 BON domain AM374_RS22135 PF07043 Protein of unknown function (DUF1328) AM374_RS22140 PF01734 Patatin-like phospholipase AM374_RS22145 PF01026 TatD related DNase AM374_RS22150 PF04055 Radical SAM superfamily AM374_RS22155 PF11230 Protein of unknown function (DUF3029) AM374_RS22160 PF01791 DeoC/LacD family aldolase AM374_RS22165 PF02885 Glycosyl transferase family, helical bundle domain AM374_RS22165 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM374_RS22165 PF00591 Glycosyl transferase family, a/b domain AM374_RS22170 PF01676 Metalloenzyme superfamily AM374_RS22175 PF01048 Phosphorylase superfamily AM374_RS22185 PF00577 Outer membrane usher protein AM374_RS22185 PF13954 PapC N-terminal domain AM374_RS22185 PF13953 PapC C-terminal domain AM374_RS22190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS22195 PF06551 Protein of unknown function (DUF1120) AM374_RS22210 PF10437 Bacterial lipoate protein ligase C-terminus AM374_RS22210 PF03099 Biotin/lipoate A/B protein ligase family AM374_RS22215 PF10144 Bacterial virulence factor haemolysin AM374_RS22225 PF18429 Domain of unknown function (DUF5609) AM374_RS22230 PF18073 Rubredoxin metal binding domain AM374_RS22235 PF01381 Helix-turn-helix AM374_RS22235 PF13521 AAA domain AM374_RS22240 PF12848 ABC transporter AM374_RS22240 PF00005 ABC transporter AM374_RS22245 PF14718 Soluble lytic murein transglycosylase L domain AM374_RS22245 PF01464 Transglycosylase SLT domain AM374_RS22250 PF01371 Trp repressor protein AM374_RS22260 PF01931 Protein of unknown function DUF84 AM374_RS22265 PF00300 Histidine phosphatase superfamily (branch 1) AM374_RS22270 PF12833 Helix-turn-helix domain AM374_RS22270 PF06445 GyrI-like small molecule binding domain AM374_RS22275 PF05981 CreA protein AM374_RS22280 PF00072 Response regulator receiver domain AM374_RS22280 PF00486 Transcriptional regulatory protein, C terminal AM374_RS22285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS22285 PF00672 HAMP domain AM374_RS22285 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS22290 PF06123 Inner membrane protein CreD AM374_RS22305 PF00577 Outer membrane usher protein AM374_RS22305 PF13953 PapC C-terminal domain AM374_RS22305 PF13954 PapC N-terminal domain AM374_RS22310 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS22310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS22320 PF15977 Winged helix-turn-helix DNA binding AM374_RS22330 PF00486 Transcriptional regulatory protein, C terminal AM374_RS22330 PF00072 Response regulator receiver domain AM374_RS22340 PF00588 SpoU rRNA Methylase family AM374_RS22345 PF08254 Threonine leader peptide AM374_RS22350 PF00742 Homoserine dehydrogenase AM374_RS22350 PF03447 Homoserine dehydrogenase, NAD binding domain AM374_RS22350 PF13840 ACT domain AM374_RS22350 PF00696 Amino acid kinase family AM374_RS22350 PF01842 ACT domain AM374_RS22355 PF00288 GHMP kinases N terminal domain AM374_RS22355 PF08544 GHMP kinases C terminal AM374_RS22360 PF00291 Pyridoxal-phosphate dependent enzyme AM374_RS22360 PF14821 Threonine synthase N terminus AM374_RS22365 PF03883 Peroxide stress protein YaaA AM374_RS22370 PF01235 Sodium:alanine symporter family AM374_RS22375 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM374_RS22380 PF00994 Probable molybdopterin binding domain AM374_RS22385 PF01184 GPR1/FUN34/yaaH family AM374_RS22390 PF03981 Ubiquinol-cytochrome C chaperone AM374_RS22390 PF13099 Domain of unknown function (DUF3944) AM374_RS22395 PF10807 Protein of unknown function (DUF2541) AM374_RS22400 PF00012 Hsp70 protein AM374_RS22405 PF01556 DnaJ C terminal domain AM374_RS22405 PF00226 DnaJ domain AM374_RS22405 PF00684 DnaJ central domain AM374_RS22410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS22410 PF03466 LysR substrate binding domain AM374_RS22430 PF00704 Glycosyl hydrolases family 18 AM374_RS22445 PF00419 Fimbrial protein AM374_RS22450 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS22450 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS22455 PF13954 PapC N-terminal domain AM374_RS22455 PF00577 Outer membrane usher protein AM374_RS22455 PF13953 PapC C-terminal domain AM374_RS22460 PF00419 Fimbrial protein AM374_RS22465 PF00419 Fimbrial protein AM374_RS22470 PF16970 Type-1 fimbrial protein, A AM374_RS22475 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS22475 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS22495 PF03466 LysR substrate binding domain AM374_RS22495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS22510 PF00149 Calcineurin-like phosphoesterase AM374_RS22510 PF02872 5'-nucleotidase, C-terminal domain AM374_RS22520 PF16385 Domain of unknown function AM374_RS22520 PF00884 Sulfatase AM374_RS22525 PF04055 Radical SAM superfamily AM374_RS22525 PF13186 Iron-sulfur cluster-binding domain AM374_RS22540 PF06965 Na+/H+ antiporter 1 AM374_RS22545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS22545 PF03466 LysR substrate binding domain AM374_RS22550 PF01055 Glycosyl hydrolases family 31 AM374_RS22560 PF01649 Ribosomal protein S20 AM374_RS22565 PF10837 Protein of unknown function (DUF2575) AM374_RS22570 PF01687 Riboflavin kinase AM374_RS22570 PF06574 FAD synthetase AM374_RS22575 PF00133 tRNA synthetases class I (I, L, M and V) AM374_RS22575 PF08264 Anticodon-binding domain of tRNA AM374_RS22575 PF06827 Zinc finger found in FPG and IleRS AM374_RS22580 PF01252 Signal peptidase (SPase) II AM374_RS22585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM374_RS22590 PF02401 LytB protein AM374_RS22600 PF01156 Inosine-uridine preferring nucleoside hydrolase AM374_RS22605 PF12431 Transcriptional regulator AM374_RS22605 PF00072 Response regulator receiver domain AM374_RS22610 PF17203 Single cache domain 3 AM374_RS22610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS22615 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AM374_RS22620 PF02436 Conserved carboxylase domain AM374_RS22620 PF00682 HMGL-like AM374_RS22620 PF00364 Biotin-requiring enzyme AM374_RS22625 PF04277 Oxaloacetate decarboxylase, gamma chain AM374_RS22630 PF03390 2-hydroxycarboxylate transporter family AM374_RS22635 PF00583 Acetyltransferase (GNAT) family AM374_RS22635 PF08218 Citrate lyase ligase C-terminal domain AM374_RS22640 PF06857 Malonate decarboxylase delta subunit (MdcD) AM374_RS22645 PF03328 HpcH/HpaI aldolase/citrate lyase family AM374_RS22650 PF04223 Citrate lyase, alpha subunit (CitF) AM374_RS22655 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AM374_RS22660 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM374_RS22665 PF01113 Dihydrodipicolinate reductase, N-terminus AM374_RS22665 PF05173 Dihydrodipicolinate reductase, C-terminus AM374_RS22675 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM374_RS22675 PF00117 Glutamine amidotransferase class-I AM374_RS22680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM374_RS22680 PF02142 MGS-like domain AM374_RS22680 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM374_RS22685 PF07180 CaiF/GrlA transcriptional regulator AM374_RS22690 PF00132 Bacterial transferase hexapeptide (six repeats) AM374_RS22695 PF00378 Enoyl-CoA hydratase/isomerase AM374_RS22700 PF00501 AMP-binding enzyme AM374_RS22700 PF13193 AMP-binding enzyme C-terminal domain AM374_RS22705 PF02515 CoA-transferase family III AM374_RS22710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM374_RS22710 PF02770 Acyl-CoA dehydrogenase, middle domain AM374_RS22710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM374_RS22715 PF02028 BCCT, betaine/carnitine/choline family transporter AM374_RS22725 PF01012 Electron transfer flavoprotein domain AM374_RS22730 PF00766 Electron transfer flavoprotein FAD-binding domain AM374_RS22730 PF01012 Electron transfer flavoprotein domain AM374_RS22735 PF01494 FAD binding domain AM374_RS22745 PF00083 Sugar (and other) transporter AM374_RS22750 PF06004 Bacterial protein of unknown function (DUF903) AM374_RS22770 PF00884 Sulfatase AM374_RS22780 PF02525 Flavodoxin-like fold AM374_RS22785 PF00999 Sodium/hydrogen exchanger family AM374_RS22785 PF02254 TrkA-N domain AM374_RS22795 PF00186 Dihydrofolate reductase AM374_RS22800 PF00149 Calcineurin-like phosphoesterase AM374_RS22805 PF04379 ApaG domain AM374_RS22810 PF00398 Ribosomal RNA adenine dimethylase AM374_RS22815 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM374_RS22820 PF09312 SurA N-terminal domain AM374_RS22820 PF00639 PPIC-type PPIASE domain AM374_RS22825 PF03968 OstA-like protein AM374_RS22825 PF04453 LPS transport system D AM374_RS22830 PF05099 Tellurite resistance protein TerB AM374_RS22830 PF00226 DnaJ domain AM374_RS22835 PF00849 RNA pseudouridylate synthase AM374_RS22840 PF12137 RNA polymerase recycling family C-terminal AM374_RS22840 PF18339 RapA N-terminal Tudor like domain 1 AM374_RS22840 PF00176 SNF2 family N-terminal domain AM374_RS22840 PF00271 Helicase conserved C-terminal domain AM374_RS22840 PF18337 RapA N-terminal Tudor like domain AM374_RS22850 PF03104 DNA polymerase family B, exonuclease domain AM374_RS22850 PF00136 DNA polymerase family B AM374_RS22870 PF00596 Class II Aldolase and Adducin N-terminal domain AM374_RS22875 PF02610 L-arabinose isomerase AM374_RS22875 PF11762 L-arabinose isomerase C-terminal domain AM374_RS22880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM374_RS22885 PF12833 Helix-turn-helix domain AM374_RS22885 PF02311 AraC-like ligand binding domain AM374_RS22890 PF09335 SNARE associated Golgi protein AM374_RS22895 PF00005 ABC transporter AM374_RS22900 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS22910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM374_RS22910 PF12793 Sugar transport-related sRNA regulator N-term AM374_RS22920 PF00694 Aconitase C-terminal domain AM374_RS22925 PF00330 Aconitase family (aconitate hydratase) AM374_RS22930 PF00180 Isocitrate/isopropylmalate dehydrogenase AM374_RS22935 PF08502 LeuA allosteric (dimerisation) domain AM374_RS22935 PF00682 HMGL-like AM374_RS22940 PF08054 Leucine operon leader peptide AM374_RS22945 PF03466 LysR substrate binding domain AM374_RS22945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS22950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM374_RS22950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM374_RS22950 PF00205 Thiamine pyrophosphate enzyme, central domain AM374_RS22955 PF10369 Small subunit of acetolactate synthase AM374_RS22960 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM374_RS22960 PF00356 Bacterial regulatory proteins, lacI family AM374_RS22965 PF02381 MraZ protein, putative antitoxin-like AM374_RS22970 PF01795 MraW methylase family AM374_RS22975 PF04999 Cell division protein FtsL AM374_RS22980 PF00905 Penicillin binding protein transpeptidase domain AM374_RS22980 PF03717 Penicillin-binding Protein dimerisation domain AM374_RS22985 PF08245 Mur ligase middle domain AM374_RS22985 PF02875 Mur ligase family, glutamate ligase domain AM374_RS22985 PF01225 Mur ligase family, catalytic domain AM374_RS22990 PF02875 Mur ligase family, glutamate ligase domain AM374_RS22990 PF01225 Mur ligase family, catalytic domain AM374_RS22990 PF08245 Mur ligase middle domain AM374_RS22995 PF00953 Glycosyl transferase family 4 AM374_RS22995 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM374_RS23000 PF08245 Mur ligase middle domain AM374_RS23000 PF02875 Mur ligase family, glutamate ligase domain AM374_RS23005 PF01098 Cell cycle protein AM374_RS23010 PF03033 Glycosyltransferase family 28 N-terminal domain AM374_RS23010 PF04101 Glycosyltransferase family 28 C-terminal domain AM374_RS23015 PF08245 Mur ligase middle domain AM374_RS23015 PF01225 Mur ligase family, catalytic domain AM374_RS23015 PF02875 Mur ligase family, glutamate ligase domain AM374_RS23020 PF07478 D-ala D-ala ligase C-terminus AM374_RS23020 PF01820 D-ala D-ala ligase N-terminus AM374_RS23025 PF08478 POTRA domain, FtsQ-type AM374_RS23025 PF03799 Cell division protein FtsQ AM374_RS23030 PF02491 SHS2 domain inserted in FTSA AM374_RS23035 PF00091 Tubulin/FtsZ family, GTPase domain AM374_RS23035 PF12327 FtsZ family, C-terminal domain AM374_RS23040 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM374_RS23045 PF06558 Secretion monitor precursor protein (SecM) AM374_RS23050 PF07516 SecA Wing and Scaffold domain AM374_RS23050 PF01043 SecA preprotein cross-linking domain AM374_RS23050 PF07517 SecA DEAD-like domain AM374_RS23050 PF02810 SEC-C motif AM374_RS23055 PF00293 NUDIX domain AM374_RS23060 PF00248 Aldo/keto reductase family AM374_RS23065 PF03466 LysR substrate binding domain AM374_RS23065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS23070 PF03884 DNA gyrase inhibitor YacG AM374_RS23075 PF07072 Cell division protein AM374_RS23080 PF01121 Dephospho-CoA kinase AM374_RS23085 PF00478 IMP dehydrogenase / GMP reductase domain AM374_RS23090 PF00482 Type II secretion system (T2SS), protein F AM374_RS23095 PF00437 Type II/IV secretion system protein AM374_RS23095 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM374_RS23100 PF07963 Prokaryotic N-terminal methylation motif AM374_RS23110 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM374_RS23110 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM374_RS23115 PF01510 N-acetylmuramoyl-L-alanine amidase AM374_RS23120 PF17113 Regulatory signalling modulator protein AmpE AM374_RS23125 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AM374_RS23125 PF04616 Glycosyl hydrolases family 43 AM374_RS23135 PF00324 Amino acid permease AM374_RS23140 PF00392 Bacterial regulatory proteins, gntR family AM374_RS23140 PF07729 FCD domain AM374_RS23145 PF00456 Transketolase, thiamine diphosphate binding domain AM374_RS23145 PF17831 Pyruvate dehydrogenase E1 component middle domain AM374_RS23150 PF00364 Biotin-requiring enzyme AM374_RS23150 PF02817 e3 binding domain AM374_RS23150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM374_RS23155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS23155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM374_RS23170 PF11737 Protein of unknown function (DUF3300) AM374_RS23180 PF06434 Aconitate hydratase 2 N-terminus AM374_RS23180 PF00330 Aconitase family (aconitate hydratase) AM374_RS23180 PF11791 Aconitate B N-terminal domain AM374_RS23210 PF00330 Aconitase family (aconitate hydratase) AM374_RS23210 PF06434 Aconitate hydratase 2 N-terminus AM374_RS23210 PF11791 Aconitate B N-terminal domain AM374_RS23225 PF06062 Uncharacterised protein family (UPF0231) AM374_RS23230 PF03812 2-keto-3-deoxygluconate permease AM374_RS23235 PF07005 Sugar-binding N-terminal domain AM374_RS23235 PF17042 Nucleotide-binding C-terminal domain AM374_RS23240 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM374_RS23245 PF00455 DeoR C terminal sensor domain AM374_RS23245 PF08220 DeoR-like helix-turn-helix domain AM374_RS23250 PF02675 S-adenosylmethionine decarboxylase AM374_RS23255 PF17284 Spermidine synthase tetramerisation domain AM374_RS23260 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM374_RS23265 PF00394 Multicopper oxidase AM374_RS23265 PF07731 Multicopper oxidase AM374_RS23265 PF07732 Multicopper oxidase AM374_RS23270 PF01011 PQQ enzyme repeat AM374_RS23275 PF00156 Phosphoribosyl transferase domain AM374_RS23280 PF00484 Carbonic anhydrase AM374_RS23285 PF00005 ABC transporter AM374_RS23290 PF01061 ABC-2 type transporter AM374_RS23295 PF00419 Fimbrial protein AM374_RS23300 PF00577 Outer membrane usher protein AM374_RS23300 PF13954 PapC N-terminal domain AM374_RS23300 PF13953 PapC C-terminal domain AM374_RS23305 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS23305 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS23315 PF03610 PTS system fructose IIA component AM374_RS23320 PF01522 Polysaccharide deacetylase AM374_RS23340 PF00419 Fimbrial protein AM374_RS23345 PF13954 PapC N-terminal domain AM374_RS23345 PF00577 Outer membrane usher protein AM374_RS23345 PF13953 PapC C-terminal domain AM374_RS23360 PF02261 Aspartate decarboxylase AM374_RS23365 PF02569 Pantoate-beta-alanine ligase AM374_RS23370 PF02548 Ketopantoate hydroxymethyltransferase AM374_RS23375 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM374_RS23380 PF12626 Polymerase A arginine-rich C-terminus AM374_RS23380 PF01743 Poly A polymerase head domain AM374_RS23380 PF12627 Probable RNA and SrmB- binding site of polymerase A AM374_RS23385 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM374_RS23390 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM374_RS23395 PF03749 Sugar fermentation stimulation protein RE domain AM374_RS23395 PF17746 SfsA N-terminal OB domain AM374_RS23400 PF02834 LigT like Phosphoesterase AM374_RS23405 PF08482 ATP-dependent helicase C-terminal AM374_RS23405 PF00271 Helicase conserved C-terminal domain AM374_RS23405 PF04408 Helicase associated domain (HA2) AM374_RS23405 PF00270 DEAD/DEAH box helicase AM374_RS23410 PF14814 Bifunctional transglycosylase second domain AM374_RS23410 PF00912 Transglycosylase AM374_RS23410 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AM374_RS23410 PF00905 Penicillin binding protein transpeptidase domain AM374_RS23415 PF00593 TonB dependent receptor AM374_RS23415 PF07715 TonB-dependent Receptor Plug Domain AM374_RS23420 PF00005 ABC transporter AM374_RS23425 PF01497 Periplasmic binding protein AM374_RS23430 PF01032 FecCD transport family AM374_RS23455 PF13954 PapC N-terminal domain AM374_RS23455 PF00577 Outer membrane usher protein AM374_RS23455 PF13953 PapC C-terminal domain AM374_RS23460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS23460 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS23465 PF00419 Fimbrial protein AM374_RS23470 PF00419 Fimbrial protein AM374_RS23475 PF00419 Fimbrial protein AM374_RS23480 PF11245 Protein of unknown function (DUF2544) AM374_RS23485 PF00202 Aminotransferase class-III AM374_RS23490 PF00654 Voltage gated chloride channel AM374_RS23495 PF01521 Iron-sulphur cluster biosynthesis AM374_RS23500 PF03458 UPF0126 domain AM374_RS23505 PF01497 Periplasmic binding protein AM374_RS23510 PF01048 Phosphorylase superfamily AM374_RS23515 PF13286 Phosphohydrolase-associated domain AM374_RS23515 PF01966 HD domain AM374_RS23520 PF00595 PDZ domain AM374_RS23525 PF13556 PucR C-terminal helix-turn-helix domain AM374_RS23525 PF17853 GGDEF-like domain AM374_RS23525 PF05651 Putative sugar diacid recognition AM374_RS23530 PF11944 Protein of unknown function (DUF3461) AM374_RS23535 PF00083 Sugar (and other) transporter AM374_RS23535 PF07690 Major Facilitator Superfamily AM374_RS23540 PF14602 Hexapeptide repeat of succinyl-transferase AM374_RS23540 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM374_RS23540 PF00132 Bacterial transferase hexapeptide (six repeats) AM374_RS23545 PF08335 GlnD PII-uridylyltransferase AM374_RS23545 PF01909 Nucleotidyltransferase domain AM374_RS23545 PF01842 ACT domain AM374_RS23545 PF01966 HD domain AM374_RS23555 PF00557 Metallopeptidase family M24 AM374_RS23560 PF00318 Ribosomal protein S2 AM374_RS23565 PF00889 Elongation factor TS AM374_RS23570 PF00696 Amino acid kinase family AM374_RS23575 PF01765 Ribosome recycling factor AM374_RS23580 PF13288 DXP reductoisomerase C-terminal domain AM374_RS23580 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM374_RS23580 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM374_RS23590 PF01255 Putative undecaprenyl diphosphate synthase AM374_RS23600 PF02163 Peptidase family M50 AM374_RS23600 PF17820 PDZ domain AM374_RS23605 PF07244 Surface antigen variable number repeat AM374_RS23605 PF01103 Surface antigen AM374_RS23610 PF03938 Outer membrane protein (OmpH-like) AM374_RS23615 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM374_RS23615 PF00132 Bacterial transferase hexapeptide (six repeats) AM374_RS23620 PF07977 FabA-like domain AM374_RS23625 PF00132 Bacterial transferase hexapeptide (six repeats) AM374_RS23625 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM374_RS23630 PF02684 Lipid-A-disaccharide synthetase AM374_RS23635 PF01351 Ribonuclease HII AM374_RS23640 PF14579 Helix-hairpin-helix motif AM374_RS23640 PF01336 OB-fold nucleic acid binding domain AM374_RS23640 PF02811 PHP domain AM374_RS23640 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM374_RS23640 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM374_RS23645 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM374_RS23650 PF18416 N-acetylglucosamine binding protein domain 2 AM374_RS23650 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AM374_RS23655 PF01276 Orn/Lys/Arg decarboxylase, major domain AM374_RS23655 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM374_RS23655 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM374_RS23660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM374_RS23665 PF11734 TilS substrate C-terminal domain AM374_RS23665 PF09179 TilS substrate binding domain AM374_RS23665 PF01171 PP-loop family AM374_RS23670 PF07073 Modulator of Rho-dependent transcription termination (ROF) AM374_RS23675 PF06786 Uncharacterised protein family (UPF0253) AM374_RS23680 PF07152 YaeQ protein AM374_RS23685 PF00472 RF-1 domain AM374_RS23690 PF17185 NlpE C-terminal OB domain AM374_RS23690 PF04170 NlpE N-terminal domain AM374_RS23695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM374_RS23695 PF04073 Aminoacyl-tRNA editing domain AM374_RS23695 PF03129 Anticodon binding domain AM374_RS23700 PF18389 TrmO C-terminal domain AM374_RS23700 PF01980 tRNA-methyltransferase O AM374_RS23705 PF16358 RcsF lipoprotein AM374_RS23710 PF03180 NLPA lipoprotein AM374_RS23715 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS23720 PF00005 ABC transporter AM374_RS23720 PF09383 NIL domain AM374_RS23760 PF00248 Aldo/keto reductase family AM374_RS23765 PF03466 LysR substrate binding domain AM374_RS23765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS23770 PF07690 Major Facilitator Superfamily AM374_RS23775 PF03372 Endonuclease/Exonuclease/phosphatase family AM374_RS23780 PF08241 Methyltransferase domain AM374_RS23785 PF01464 Transglycosylase SLT domain AM374_RS23785 PF01476 LysM domain AM374_RS23790 PF00753 Metallo-beta-lactamase superfamily AM374_RS23790 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM374_RS23795 PF08241 Methyltransferase domain AM374_RS23800 PF00075 RNase H AM374_RS23805 PF00929 Exonuclease AM374_RS23830 PF05947 Type VI secretion system, TssF AM374_RS23835 PF04965 Gene 25-like lysozyme AM374_RS23850 PF07724 AAA domain (Cdc48 subfamily) AM374_RS23850 PF10431 C-terminal, D2-small domain, of ClpB protein AM374_RS23850 PF00004 ATPase family associated with various cellular activities (AAA) AM374_RS23850 PF17871 AAA lid domain AM374_RS23855 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM374_RS23860 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM374_RS23905 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AM374_RS23910 PF05736 OprF membrane domain AM374_RS23910 PF00691 OmpA family AM374_RS23930 PF14331 ImcF-related N-terminal domain AM374_RS23930 PF06744 Type VI secretion protein IcmF C-terminal AM374_RS23930 PF06761 Intracellular multiplication and human macrophage-killing AM374_RS23975 PF06715 Gp5 C-terminal repeat (3 copies) AM374_RS23975 PF04717 Type VI secretion system, phage-baseplate injector AM374_RS23985 PF03527 RHS protein AM374_RS23985 PF05593 RHS Repeat AM374_RS24105 PF01037 Lrp/AsnC ligand binding domain AM374_RS24105 PF13404 AsnC-type helix-turn-helix domain AM374_RS24125 PF13505 Outer membrane protein beta-barrel domain AM374_RS24135 PF00795 Carbon-nitrogen hydrolase AM374_RS24140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM374_RS24140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM374_RS24140 PF02770 Acyl-CoA dehydrogenase, middle domain AM374_RS24140 PF09317 Domain of unknown function (DUF1974) AM374_RS24145 PF13580 SIS domain AM374_RS24150 PF13230 Glutamine amidotransferases class-II AM374_RS24155 PF03734 L,D-transpeptidase catalytic domain AM374_RS24160 PF00817 impB/mucB/samB family AM374_RS24160 PF11799 impB/mucB/samB family C-terminal domain AM374_RS24160 PF11798 IMS family HHH motif AM374_RS24170 PF00472 RF-1 domain AM374_RS24175 PF01546 Peptidase family M20/M25/M40 AM374_RS24175 PF07687 Peptidase dimerisation domain AM374_RS24180 PF00156 Phosphoribosyl transferase domain AM374_RS24185 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AM374_RS24190 PF07417 Sigma factor-binding transcriptional regulator Crl AM374_RS24195 PF00267 Gram-negative porin AM374_RS24200 PF00696 Amino acid kinase family AM374_RS24200 PF01472 PUA domain AM374_RS24205 PF00171 Aldehyde dehydrogenase family AM374_RS24220 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS24220 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS24230 PF00577 Outer membrane usher protein AM374_RS24230 PF13953 PapC C-terminal domain AM374_RS24230 PF13954 PapC N-terminal domain AM374_RS24235 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS24235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS24240 PF16970 Type-1 fimbrial protein, A AM374_RS24265 PF12792 CSS motif domain associated with EAL AM374_RS24265 PF00563 EAL domain AM374_RS24295 PF13505 Outer membrane protein beta-barrel domain AM374_RS24315 PF02321 Outer membrane efflux protein AM374_RS24320 PF00873 AcrB/AcrD/AcrF family AM374_RS24325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM374_RS24330 PF00403 Heavy-metal-associated domain AM374_RS24335 PF00376 MerR family regulatory protein AM374_RS24335 PF09278 MerR, DNA binding AM374_RS24345 PF07690 Major Facilitator Superfamily AM374_RS24350 PF01555 DNA methylase AM374_RS24350 PF18273 Type III R-M EcoP15I C-terminal domain AM374_RS24355 PF08774 VRR-NUC domain AM374_RS24355 PF04851 Type III restriction enzyme, res subunit AM374_RS24365 PF01654 Cytochrome bd terminal oxidase subunit I AM374_RS24370 PF02322 Cytochrome bd terminal oxidase subunit II AM374_RS24385 PF07715 TonB-dependent Receptor Plug Domain AM374_RS24385 PF00593 TonB dependent receptor AM374_RS24390 PF01810 LysE type translocator AM374_RS24395 PF07338 Protein of unknown function (DUF1471) AM374_RS24400 PF02954 Bacterial regulatory protein, Fis family AM374_RS24400 PF00158 Sigma-54 interaction domain AM374_RS24400 PF06506 Propionate catabolism activator AM374_RS24410 PF00285 Citrate synthase, C-terminal domain AM374_RS24415 PF03972 MmgE/PrpD family AM374_RS24420 PF16177 Acetyl-coenzyme A synthetase N-terminus AM374_RS24420 PF13193 AMP-binding enzyme C-terminal domain AM374_RS24420 PF00501 AMP-binding enzyme AM374_RS24425 PF00490 Delta-aminolevulinic acid dehydratase AM374_RS24430 PF03797 Autotransporter beta-domain AM374_RS24435 PF15977 Winged helix-turn-helix DNA binding AM374_RS24440 PF00144 Beta-lactamase AM374_RS24450 PF05992 SbmA/BacA-like family AM374_RS24455 PF07759 Protein of unknown function (DUF1615) AM374_RS24460 PF10954 Protein of unknown function (DUF2755) AM374_RS24465 PF10953 Protein of unknown function (DUF2754) AM374_RS24470 PF07478 D-ala D-ala ligase C-terminus AM374_RS24470 PF01820 D-ala D-ala ligase N-terminus AM374_RS24480 PF07690 Major Facilitator Superfamily AM374_RS24485 PF10796 Sigma-S stabilisation anti-adaptor protein AM374_RS24495 PF07769 psiF repeat AM374_RS24500 PF05230 MASE2 domain AM374_RS24500 PF00990 Diguanylate cyclase, GGDEF domain AM374_RS24505 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM374_RS24505 PF03807 NADP oxidoreductase coenzyme F420-dependent AM374_RS24510 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM374_RS24515 PF01202 Shikimate kinase AM374_RS24520 PF16362 YaiA protein AM374_RS24525 PF07302 AroM protein AM374_RS24530 PF06865 Pyrimidine/purine nucleoside phosphorylase AM374_RS24535 PF04381 Putative exonuclease, RdgC AM374_RS24540 PF00480 ROK family AM374_RS24545 PF07690 Major Facilitator Superfamily AM374_RS24550 PF13476 AAA domain AM374_RS24555 PF12320 Type 5 capsule protein repressor C-terminal domain AM374_RS24555 PF00149 Calcineurin-like phosphoesterase AM374_RS24560 PF00486 Transcriptional regulatory protein, C terminal AM374_RS24560 PF00072 Response regulator receiver domain AM374_RS24565 PF11808 Phosphate regulon sensor protein PhoR AM374_RS24565 PF00989 PAS fold AM374_RS24565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS24565 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS24570 PF05525 Branched-chain amino acid transport protein AM374_RS24575 PF00324 Amino acid permease AM374_RS24580 PF02903 Alpha amylase, N-terminal ig-like domain AM374_RS24580 PF00128 Alpha amylase, catalytic domain AM374_RS24585 PF00578 AhpC/TSA family AM374_RS24585 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM374_RS24590 PF04336 Acyl carrier protein phosphodiesterase AM374_RS24595 PF02547 Queuosine biosynthesis protein AM374_RS24605 PF01702 Queuine tRNA-ribosyltransferase AM374_RS24610 PF02699 Preprotein translocase subunit AM374_RS24615 PF02355 Protein export membrane protein AM374_RS24615 PF07549 SecD/SecF GG Motif AM374_RS24615 PF13721 SecD export protein N-terminal TM region AM374_RS24620 PF07549 SecD/SecF GG Motif AM374_RS24620 PF02355 Protein export membrane protein AM374_RS24635 PF01844 HNH endonuclease AM374_RS24650 PF03502 Nucleoside-specific channel-forming protein, Tsx AM374_RS24655 PF11622 Protein of unknown function (DUF3251) AM374_RS24660 PF03477 ATP cone domain AM374_RS24665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM374_RS24665 PF01872 RibD C-terminal domain AM374_RS24670 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM374_RS24675 PF01029 NusB family AM374_RS24680 PF00586 AIR synthase related protein, N-terminal domain AM374_RS24680 PF02769 AIR synthase related protein, C-terminal domain AM374_RS24685 PF04608 Phosphatidylglycerophosphatase A AM374_RS24690 PF00248 Aldo/keto reductase family AM374_RS24695 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM374_RS24695 PF02779 Transketolase, pyrimidine binding domain AM374_RS24695 PF02780 Transketolase, C-terminal domain AM374_RS24700 PF00348 Polyprenyl synthetase AM374_RS24705 PF02609 Exonuclease VII small subunit AM374_RS24710 PF02926 THUMP domain AM374_RS24710 PF02568 Thiamine biosynthesis protein (ThiI) AM374_RS24715 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS24720 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS24725 PF00005 ABC transporter AM374_RS24725 PF08402 TOBE domain AM374_RS24730 PF01547 Bacterial extracellular solute-binding protein AM374_RS24735 PF07702 UTRA domain AM374_RS24735 PF00392 Bacterial regulatory proteins, gntR family AM374_RS24740 PF00266 Aminotransferase class-V AM374_RS24750 PF01965 DJ-1/PfpI family AM374_RS24755 PF02558 Ketopantoate reductase PanE/ApbA AM374_RS24755 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM374_RS24760 PF04461 Protein of unknown function (DUF520) AM374_RS24765 PF07690 Major Facilitator Superfamily AM374_RS24780 PF01040 UbiA prenyltransferase family AM374_RS24785 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM374_RS24790 PF00510 Cytochrome c oxidase subunit III AM374_RS24795 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM374_RS24800 PF06481 COX Aromatic Rich Motif AM374_RS24800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM374_RS24805 PF07690 Major Facilitator Superfamily AM374_RS24810 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM374_RS24810 PF03923 Uncharacterized lipoprotein AM374_RS24820 PF01722 BolA-like protein AM374_RS24835 PF05697 Bacterial trigger factor protein (TF) AM374_RS24835 PF05698 Bacterial trigger factor protein (TF) C-terminus AM374_RS24835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM374_RS24840 PF00574 Clp protease AM374_RS24845 PF07724 AAA domain (Cdc48 subfamily) AM374_RS24845 PF06689 ClpX C4-type zinc finger AM374_RS24845 PF10431 C-terminal, D2-small domain, of ClpB protein AM374_RS24850 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM374_RS24850 PF00004 ATPase family associated with various cellular activities (AAA) AM374_RS24850 PF05362 Lon protease (S16) C-terminal proteolytic domain AM374_RS24855 PF00216 Bacterial DNA-binding protein AM374_RS24860 PF13145 PPIC-type PPIASE domain AM374_RS24875 PF06508 Queuosine biosynthesis protein QueC AM374_RS24880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM374_RS24880 PF12793 Sugar transport-related sRNA regulator N-term AM374_RS24895 PF13404 AsnC-type helix-turn-helix domain AM374_RS24895 PF01037 Lrp/AsnC ligand binding domain AM374_RS24900 PF00664 ABC transporter transmembrane region AM374_RS24900 PF00005 ABC transporter AM374_RS24905 PF00005 ABC transporter AM374_RS24905 PF00664 ABC transporter transmembrane region AM374_RS24910 PF00543 Nitrogen regulatory protein P-II AM374_RS24915 PF00909 Ammonium Transporter Family AM374_RS24925 PF09619 Type III secretion system lipoprotein chaperone (YscW) AM374_RS24930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM374_RS24940 PF12792 CSS motif domain associated with EAL AM374_RS24940 PF00563 EAL domain AM374_RS24945 PF01197 Ribosomal protein L31 AM374_RS24950 PF00444 Ribosomal protein L36 AM374_RS24955 PF10777 Inner membrane protein YlaC AM374_RS24960 PF14602 Hexapeptide repeat of succinyl-transferase AM374_RS24960 PF12464 Maltose acetyltransferase AM374_RS24965 PF05321 Haemolysin expression modulating protein AM374_RS24970 PF10757 Biofilm formation regulator YbaJ AM374_RS24975 PF00873 AcrB/AcrD/AcrF family AM374_RS24980 PF00529 HlyD membrane-fusion protein of T1SS AM374_RS24980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM374_RS24985 PF00440 Bacterial regulatory proteins, tetR family AM374_RS24985 PF08361 MAATS-type transcriptional repressor, C-terminal region AM374_RS24990 PF00924 Mechanosensitive ion channel AM374_RS24990 PF12795 Mechanosensitive ion channel porin domain AM374_RS24990 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM374_RS24995 PF04754 Putative transposase, YhgA-like AM374_RS25000 PF10689 Protein of unknown function (DUF2496) AM374_RS25005 PF07445 Primosomal replication protein priC AM374_RS25010 PF04304 Protein of unknown function (DUF454) AM374_RS25015 PF00156 Phosphoribosyl transferase domain AM374_RS25020 PF12170 DNA polymerase III tau subunit V interacting with alpha AM374_RS25020 PF12169 DNA polymerase III subunits gamma and tau domain III AM374_RS25020 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM374_RS25025 PF02575 YbaB/EbfC DNA-binding family AM374_RS25030 PF02132 RecR protein AM374_RS25030 PF13662 Toprim domain AM374_RS25035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS25035 PF00183 Hsp90 protein AM374_RS25045 PF05191 Adenylate kinase, active site lid AM374_RS25050 PF00762 Ferrochelatase AM374_RS25055 PF07859 alpha/beta hydrolase fold AM374_RS25060 PF00294 pfkB family carbohydrate kinase AM374_RS25065 PF00999 Sodium/hydrogen exchanger family AM374_RS25065 PF02254 TrkA-N domain AM374_RS25070 PF07690 Major Facilitator Superfamily AM374_RS25075 PF02872 5'-nucleotidase, C-terminal domain AM374_RS25075 PF00149 Calcineurin-like phosphoesterase AM374_RS25080 PF04073 Aminoacyl-tRNA editing domain AM374_RS25085 PF01963 TraB family AM374_RS25095 PF00403 Heavy-metal-associated domain AM374_RS25100 PF13411 MerR HTH family regulatory protein AM374_RS25105 PF01957 NfeD-like C-terminal, partner-binding AM374_RS25110 PF01145 SPFH domain / Band 7 family AM374_RS25110 PF16200 C-terminal region of band_7 AM374_RS25115 PF00005 ABC transporter AM374_RS25120 PF03649 Uncharacterised protein family (UPF0014) AM374_RS25125 PF00085 Thioredoxin AM374_RS25130 PF00106 short chain dehydrogenase AM374_RS25135 PF13472 GDSL-like Lipase/Acylhydrolase family AM374_RS25140 PF00005 ABC transporter AM374_RS25155 PF03180 NLPA lipoprotein AM374_RS25160 PF00005 ABC transporter AM374_RS25160 PF09383 NIL domain AM374_RS25165 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS25175 PF03466 LysR substrate binding domain AM374_RS25175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS25180 PF04115 Ureidoglycolate lyase AM374_RS25185 PF01614 Bacterial transcriptional regulator AM374_RS25185 PF09339 IclR helix-turn-helix domain AM374_RS25190 PF00205 Thiamine pyrophosphate enzyme, central domain AM374_RS25190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM374_RS25190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM374_RS25195 PF01261 Xylose isomerase-like TIM barrel AM374_RS25200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM374_RS25200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM374_RS25210 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM374_RS25215 PF01979 Amidohydrolase family AM374_RS25220 PF00860 Permease family AM374_RS25225 PF02595 Glycerate kinase family AM374_RS25230 PF07883 Cupin domain AM374_RS25230 PF05899 Protein of unknown function (DUF861) AM374_RS25235 PF01546 Peptidase family M20/M25/M40 AM374_RS25240 PF02615 Malate/L-lactate dehydrogenase AM374_RS25245 PF00549 CoA-ligase AM374_RS25245 PF02629 CoA binding domain AM374_RS25250 PF06545 Protein of unknown function (DUF1116) AM374_RS25255 PF11392 Protein of unknown function (DUF2877) AM374_RS25260 PF00696 Amino acid kinase family AM374_RS25265 PF02222 ATP-grasp domain AM374_RS25265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM374_RS25270 PF00731 AIR carboxylase AM374_RS25280 PF12850 Calcineurin-like phosphoesterase superfamily domain AM374_RS25285 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM374_RS25290 PF01406 tRNA synthetases class I (C) catalytic domain AM374_RS25290 PF09190 DALR domain AM374_RS25305 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM374_RS25315 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM374_RS25315 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM374_RS25325 PF00419 Fimbrial protein AM374_RS25335 PF02753 Pili assembly chaperone PapD, C-terminal domain AM374_RS25335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM374_RS25340 PF00577 Outer membrane usher protein AM374_RS25340 PF13954 PapC N-terminal domain AM374_RS25340 PF13953 PapC C-terminal domain AM374_RS25345 PF00419 Fimbrial protein AM374_RS25350 PF00419 Fimbrial protein AM374_RS25355 PF00072 Response regulator receiver domain AM374_RS25355 PF00196 Bacterial regulatory proteins, luxR family AM374_RS25370 PF00196 Bacterial regulatory proteins, luxR family AM374_RS25395 PF00535 Glycosyl transferase family 2 AM374_RS25400 PF04138 GtrA-like protein AM374_RS25410 PF00672 HAMP domain AM374_RS25410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS25410 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS25420 PF12833 Helix-turn-helix domain AM374_RS25420 PF12852 Cupin AM374_RS25425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM374_RS25425 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS25430 PF07338 Protein of unknown function (DUF1471) AM374_RS25435 PF04224 Protein of unknown function, DUF417 AM374_RS25445 PF00324 Amino acid permease AM374_RS25450 PF00924 Mechanosensitive ion channel AM374_RS25460 PF03797 Autotransporter beta-domain AM374_RS25460 PF00657 GDSL-like Lipase/Acylhydrolase AM374_RS25465 PF00158 Sigma-54 interaction domain AM374_RS25465 PF00874 PRD domain AM374_RS25465 PF03610 PTS system fructose IIA component AM374_RS25470 PF01380 SIS domain AM374_RS25480 PF03613 PTS system mannose/fructose/sorbose family IID component AM374_RS25490 PF03830 PTS system sorbose subfamily IIB component AM374_RS25505 PF04237 YjbR AM374_RS25515 PF12833 Helix-turn-helix domain AM374_RS25520 PF06643 Protein of unknown function (DUF1158) AM374_RS25525 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM374_RS25530 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AM374_RS25530 PF01648 4'-phosphopantetheinyl transferase superfamily AM374_RS25535 PF07715 TonB-dependent Receptor Plug Domain AM374_RS25535 PF00593 TonB dependent receptor AM374_RS25540 PF00756 Putative esterase AM374_RS25540 PF11806 Domain of unknown function (DUF3327) AM374_RS25545 PF03621 MbtH-like protein AM374_RS25550 PF13193 AMP-binding enzyme C-terminal domain AM374_RS25550 PF00501 AMP-binding enzyme AM374_RS25550 PF00668 Condensation domain AM374_RS25550 PF00550 Phosphopantetheine attachment site AM374_RS25550 PF00975 Thioesterase domain AM374_RS25555 PF02706 Chain length determinant protein AM374_RS25560 PF00005 ABC transporter AM374_RS25565 PF01032 FecCD transport family AM374_RS25570 PF01032 FecCD transport family AM374_RS25575 PF05977 Transmembrane secretion effector AM374_RS25580 PF01497 Periplasmic binding protein AM374_RS25585 PF00425 chorismate binding enzyme AM374_RS25590 PF00501 AMP-binding enzyme AM374_RS25590 PF13193 AMP-binding enzyme C-terminal domain AM374_RS25595 PF00857 Isochorismatase family AM374_RS25595 PF00550 Phosphopantetheine attachment site AM374_RS25605 PF03061 Thioesterase superfamily AM374_RS25610 PF02554 Carbon starvation protein CstA AM374_RS25610 PF13722 5TM C-terminal transporter carbon starvation CstA AM374_RS25615 PF04328 Selenoprotein, putative AM374_RS25620 PF00465 Iron-containing alcohol dehydrogenase AM374_RS25625 PF00155 Aminotransferase class I and II AM374_RS25630 PF02195 ParB-like nuclease domain AM374_RS25635 PF11922 Domain of unknown function (DUF3440) AM374_RS25635 PF01507 Phosphoadenosine phosphosulfate reductase family AM374_RS25640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS25640 PF03466 LysR substrate binding domain AM374_RS25650 PF13098 Thioredoxin-like domain AM374_RS25655 PF00578 AhpC/TSA family AM374_RS25655 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM374_RS25660 PF13192 Thioredoxin domain AM374_RS25660 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM374_RS25670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM374_RS25670 PF01568 Molydopterin dinucleotide binding domain AM374_RS25670 PF00384 Molybdopterin oxidoreductase AM374_RS25675 PF13247 4Fe-4S dicluster domain AM374_RS25685 PF00582 Universal stress protein family AM374_RS25695 PF13823 Alcohol dehydrogenase GroES-associated AM374_RS25695 PF08240 Alcohol dehydrogenase GroES-like domain AM374_RS25695 PF00107 Zinc-binding dehydrogenase AM374_RS25700 PF01272 Transcription elongation factor, GreA/GreB, C-term AM374_RS25700 PF14760 Rnk N-terminus AM374_RS25710 PF00445 Ribonuclease T2 family AM374_RS25715 PF00939 Sodium:sulfate symporter transmembrane region AM374_RS25720 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM374_RS25725 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AM374_RS25730 PF04223 Citrate lyase, alpha subunit (CitF) AM374_RS25735 PF03328 HpcH/HpaI aldolase/citrate lyase family AM374_RS25740 PF06857 Malonate decarboxylase delta subunit (MdcD) AM374_RS25745 PF08218 Citrate lyase ligase C-terminal domain AM374_RS25755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS25755 PF00989 PAS fold AM374_RS25755 PF17203 Single cache domain 3 AM374_RS25755 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM374_RS25760 PF12431 Transcriptional regulator AM374_RS25760 PF00072 Response regulator receiver domain AM374_RS25765 PF03606 C4-dicarboxylate anaerobic carrier AM374_RS25775 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AM374_RS25780 PF00313 'Cold-shock' DNA-binding domain AM374_RS25785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM374_RS25790 PF00795 Carbon-nitrogen hydrolase AM374_RS25795 PF02416 mttA/Hcf106 family AM374_RS25800 PF04055 Radical SAM superfamily AM374_RS25800 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM374_RS25805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS25805 PF03466 LysR substrate binding domain AM374_RS25810 PF03099 Biotin/lipoate A/B protein ligase family AM374_RS25815 PF04359 Protein of unknown function (DUF493) AM374_RS25820 PF07943 Penicillin-binding protein 5, C-terminal domain AM374_RS25820 PF00768 D-alanyl-D-alanine carboxypeptidase AM374_RS25825 PF05036 Sporulation related domain AM374_RS25825 PF03330 Lytic transglycolase AM374_RS25830 PF01098 Cell cycle protein AM374_RS25835 PF03717 Penicillin-binding Protein dimerisation domain AM374_RS25835 PF00905 Penicillin binding protein transpeptidase domain AM374_RS25840 PF02590 Predicted SPOUT methyltransferase AM374_RS25850 PF00300 Histidine phosphatase superfamily (branch 1) AM374_RS25855 PF00155 Aminotransferase class I and II AM374_RS25860 PF01467 Cytidylyltransferase-like AM374_RS25865 PF06144 DNA polymerase III, delta subunit AM374_RS25865 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AM374_RS25870 PF04390 Lipopolysaccharide-assembly AM374_RS25875 PF00133 tRNA synthetases class I (I, L, M and V) AM374_RS25875 PF13603 Leucyl-tRNA synthetase, Domain 2 AM374_RS25875 PF08264 Anticodon-binding domain of tRNA AM374_RS25885 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM374_RS25890 PF03812 2-keto-3-deoxygluconate permease AM374_RS25895 PF00158 Sigma-54 interaction domain AM374_RS25895 PF00989 PAS fold AM374_RS25895 PF02954 Bacterial regulatory protein, Fis family AM374_RS25900 PF07295 Zinc-ribbon containing domain AM374_RS25910 PF06889 Protein of unknown function (DUF1266) AM374_RS25920 PF06889 Protein of unknown function (DUF1266) AM374_RS25930 PF00012 Hsp70 protein AM374_RS25940 PF01156 Inosine-uridine preferring nucleoside hydrolase AM374_RS25945 PF00005 ABC transporter AM374_RS25950 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS25955 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS25960 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM374_RS25965 PF00795 Carbon-nitrogen hydrolase AM374_RS25970 PF00571 CBS domain AM374_RS25970 PF03471 Transporter associated domain AM374_RS25975 PF02130 Uncharacterized protein family UPF0054 AM374_RS25980 PF02562 PhoH-like protein AM374_RS25985 PF00919 Uncharacterized protein family UPF0004 AM374_RS25985 PF04055 Radical SAM superfamily AM374_RS25985 PF01938 TRAM domain AM374_RS25990 PF01494 FAD binding domain AM374_RS26035 PF13537 Glutamine amidotransferase domain AM374_RS26035 PF00733 Asparagine synthase AM374_RS26040 PF13344 Haloacid dehalogenase-like hydrolase AM374_RS26045 PF01047 MarR family AM374_RS26045 PF00480 ROK family AM374_RS26050 PF01979 Amidohydrolase family AM374_RS26055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM374_RS26060 PF02378 Phosphotransferase system, EIIC AM374_RS26060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM374_RS26060 PF00367 phosphotransferase system, EIIB AM374_RS26065 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM374_RS26065 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM374_RS26075 PF03573 outer membrane porin, OprD family AM374_RS26080 PF13982 YbfN-like lipoprotein AM374_RS26085 PF07690 Major Facilitator Superfamily AM374_RS26095 PF00890 FAD binding domain AM374_RS26095 PF14537 Cytochrome c3 AM374_RS26100 PF03466 LysR substrate binding domain AM374_RS26100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS26105 PF01475 Ferric uptake regulator family AM374_RS26110 PF00258 Flavodoxin AM374_RS26115 PF01402 Ribbon-helix-helix protein, copG family AM374_RS26120 PF12697 Alpha/beta hydrolase family AM374_RS26125 PF17206 SeqA protein N-terminal domain AM374_RS26125 PF03925 SeqA protein C-terminal domain AM374_RS26130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM374_RS26130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM374_RS26130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM374_RS26130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM374_RS26140 PF13520 Amino acid permease AM374_RS26145 PF01276 Orn/Lys/Arg decarboxylase, major domain AM374_RS26145 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM374_RS26145 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM374_RS26150 PF10940 Protein of unknown function (DUF2618) AM374_RS26155 PF00486 Transcriptional regulatory protein, C terminal AM374_RS26155 PF00072 Response regulator receiver domain AM374_RS26160 PF13493 Domain of unknown function (DUF4118) AM374_RS26160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM374_RS26160 PF13492 GAF domain AM374_RS26160 PF02702 Osmosensitive K+ channel His kinase sensor domain AM374_RS26160 PF00512 His Kinase A (phospho-acceptor) domain AM374_RS26165 PF02669 K+-transporting ATPase, c chain AM374_RS26175 PF03814 Potassium-transporting ATPase A subunit AM374_RS26180 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) AM374_RS26185 PF10725 Protein of unknown function (DUF2517) AM374_RS26190 PF00875 DNA photolyase AM374_RS26190 PF03441 FAD binding domain of DNA photolyase AM374_RS26195 PF00854 POT family AM374_RS26205 PF01784 NIF3 (NGG1p interacting factor 3) AM374_RS26210 PF02682 Carboxyltransferase domain, subdomain C and D AM374_RS26215 PF02626 Carboxyltransferase domain, subdomain A and B AM374_RS26220 PF03746 LamB/YcsF family AM374_RS26230 PF00589 Phage integrase family AM374_RS26245 PF03275 UDP-galactopyranose mutase AM374_RS26260 PF01061 ABC-2 type transporter AM374_RS26265 PF00005 ABC transporter AM374_RS26270 PF17994 Galactofuranosyltransferase 2 N-terminal AM374_RS26290 PF06827 Zinc finger found in FPG and IleRS AM374_RS26290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM374_RS26290 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM374_RS26295 PF05145 Transition state regulatory protein AbrB AM374_RS26300 PF00285 Citrate synthase, C-terminal domain AM374_RS26315 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM374_RS26320 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM374_RS26325 PF00890 FAD binding domain AM374_RS26325 PF02910 Fumarate reductase flavoprotein C-term AM374_RS26330 PF13085 2Fe-2S iron-sulfur cluster binding domain AM374_RS26335 PF02779 Transketolase, pyrimidine binding domain AM374_RS26335 PF16870 2-oxoglutarate dehydrogenase C-terminal AM374_RS26335 PF00676 Dehydrogenase E1 component AM374_RS26335 PF16078 2-oxoglutarate dehydrogenase N-terminus AM374_RS26340 PF00364 Biotin-requiring enzyme AM374_RS26340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM374_RS26340 PF02817 e3 binding domain AM374_RS26345 PF08442 ATP-grasp domain AM374_RS26345 PF00549 CoA-ligase AM374_RS26350 PF00549 CoA-ligase AM374_RS26350 PF02629 CoA binding domain AM374_RS26355 PF01654 Cytochrome bd terminal oxidase subunit I AM374_RS26360 PF02322 Cytochrome bd terminal oxidase subunit II AM374_RS26365 PF08173 Membrane bound YbgT-like protein AM374_RS26370 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AM374_RS26375 PF03061 Thioesterase superfamily AM374_RS26380 PF01618 MotA/TolQ/ExbB proton channel family AM374_RS26385 PF02472 Biopolymer transport protein ExbD/TolR AM374_RS26390 PF06519 TolA C-terminal AM374_RS26395 PF04052 TolB amino-terminal domain AM374_RS26395 PF07676 WD40-like Beta Propeller Repeat AM374_RS26400 PF00691 OmpA family AM374_RS26405 PF16331 TolA binding protein trimerisation AM374_RS26405 PF13174 Tetratricopeptide repeat AM374_RS26440 PF02445 Quinolinate synthetase A protein AM374_RS26445 PF04973 Nicotinamide mononucleotide transporter AM374_RS26450 PF01545 Cation efflux family AM374_RS26455 PF13985 YbgS-like protein AM374_RS26460 PF00793 DAHP synthetase I family AM374_RS26465 PF01032 FecCD transport family AM374_RS26470 PF00005 ABC transporter AM374_RS26475 PF00300 Histidine phosphatase superfamily (branch 1) AM374_RS26485 PF01263 Aldose 1-epimerase AM374_RS26490 PF10509 Galactokinase galactose-binding signature AM374_RS26490 PF08544 GHMP kinases C terminal AM374_RS26490 PF00288 GHMP kinases N terminal domain AM374_RS26495 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM374_RS26495 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM374_RS26500 PF16363 GDP-mannose 4,6 dehydratase AM374_RS26510 PF00005 ABC transporter AM374_RS26515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS26515 PF03459 TOBE domain AM374_RS26520 PF10766 Multidrug efflux pump-associated protein AcrZ AM374_RS26530 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS26535 PF03459 TOBE domain AM374_RS26535 PF00005 ABC transporter AM374_RS26545 PF10282 Lactonase, 7-bladed beta-propeller AM374_RS26550 PF01095 Pectinesterase AM374_RS26555 PF01979 Amidohydrolase family AM374_RS26560 PF00491 Arginase family AM374_RS26565 PF07702 UTRA domain AM374_RS26565 PF00392 Bacterial regulatory proteins, gntR family AM374_RS26570 PF17391 Urocanase N-terminal domain AM374_RS26570 PF17392 Urocanase C-terminal domain AM374_RS26570 PF01175 Urocanase Rossmann-like domain AM374_RS26575 PF00221 Aromatic amino acid lyase AM374_RS26580 PF01161 Phosphatidylethanolamine-binding protein AM374_RS26585 PF00202 Aminotransferase class-III AM374_RS26590 PF06968 Biotin and Thiamin Synthesis associated domain AM374_RS26590 PF04055 Radical SAM superfamily AM374_RS26595 PF00155 Aminotransferase class I and II AM374_RS26600 PF08241 Methyltransferase domain AM374_RS26615 PF02151 UvrB/uvrC motif AM374_RS26615 PF04851 Type III restriction enzyme, res subunit AM374_RS26615 PF12344 Ultra-violet resistance protein B AM374_RS26615 PF17757 UvrB interaction domain AM374_RS26615 PF00271 Helicase conserved C-terminal domain AM374_RS26620 PF12468 Type III secretion system leucine rich repeat protein AM374_RS26620 PF14496 C-terminal novel E3 ligase, LRR-interacting AM374_RS26625 PF01933 Uncharacterised protein family UPF0052 AM374_RS26630 PF04055 Radical SAM superfamily AM374_RS26630 PF06463 Molybdenum Cofactor Synthesis C AM374_RS26635 PF00994 Probable molybdopterin binding domain AM374_RS26640 PF01967 MoaC family AM374_RS26645 PF02597 ThiS family AM374_RS26650 PF02391 MoaE protein AM374_RS26655 PF01027 Inhibitor of apoptosis-promoting Bax1 AM374_RS26675 PF03706 Lysylphosphatidylglycerol synthase TM region AM374_RS26680 PF13091 PLD-like domain AM374_RS26685 PF03372 Endonuclease/Exonuclease/phosphatase family AM374_RS26690 PF11076 Putative inner membrane protein YbhQ AM374_RS26705 PF00005 ABC transporter AM374_RS26710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM374_RS26715 PF00440 Bacterial regulatory proteins, tetR family AM374_RS26715 PF09209 Tetracyclin repressor-like, C-terminal domain AM374_RS26720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM374_RS26720 PF03466 LysR substrate binding domain AM374_RS26725 PF07690 Major Facilitator Superfamily AM374_RS26735 PF00456 Transketolase, thiamine diphosphate binding domain AM374_RS26740 PF02780 Transketolase, C-terminal domain AM374_RS26740 PF02779 Transketolase, pyrimidine binding domain AM374_RS26745 PF00465 Iron-containing alcohol dehydrogenase AM374_RS26745 PF00171 Aldehyde dehydrogenase family AM374_RS26750 PF00271 Helicase conserved C-terminal domain AM374_RS26750 PF00270 DEAD/DEAH box helicase AM374_RS26755 PF06733 DEAD_2 AM374_RS26755 PF13307 Helicase C-terminal domain AM374_RS26760 PF02885 Glycosyl transferase family, helical bundle domain AM374_RS26765 PF07338 Protein of unknown function (DUF1471) AM374_RS26770 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM374_RS26775 PF05971 RNA methyltransferase AM374_RS26780 PF00924 Mechanosensitive ion channel AM374_RS26785 PF00005 ABC transporter AM374_RS26790 PF00528 Binding-protein-dependent transport system inner membrane component AM374_RS26795 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM374_RS26800 PF00210 Ferritin-like domain AM374_RS26805 PF00892 EamA-like transporter family AM374_RS26810 PF13505 Outer membrane protein beta-barrel domain AM374_RS26815 PF00884 Sulfatase AM374_RS26825 PF02742 Iron dependent repressor, metal binding and dimerisation domain AM374_RS26825 PF01325 Iron dependent repressor, N-terminal DNA binding domain AM374_RS26830 PF03600 Citrate transporter AM374_RS26835 PF17969 L,D-transpeptidase C-terminal domain AM374_RS26835 PF03734 L,D-transpeptidase catalytic domain AM374_RS26840 PF00005 ABC transporter AM374_RS26840 PF12848 ABC transporter AM374_RS26860 PF07350 Protein of unknown function (DUF1479) AM374_RS26870 PF02901 Pyruvate formate lyase-like AM374_RS26870 PF01228 Glycine radical AM374_RS26875 PF04055 Radical SAM superfamily AM374_RS26880 PF00899 ThiF family AM374_RS26885 PF03453 MoeA N-terminal region (domain I and II) AM374_RS26885 PF00994 Probable molybdopterin binding domain AM374_RS26885 PF03454 MoeA C-terminal region (domain IV) AM374_RS26890 PF01112 Asparaginase AM374_RS26895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM374_RS26895 PF00005 ABC transporter