locus-tag class description A1D48_RS00005 PF00308 Bacterial dnaA protein A1D48_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix A1D48_RS00005 PF11638 DnaA N-terminal domain A1D48_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain A1D48_RS00010 PF02767 DNA polymerase III beta subunit, central domain A1D48_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain A1D48_RS00015 PF02463 RecF/RecN/SMC N terminal domain A1D48_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus A1D48_RS00020 PF01751 Toprim domain A1D48_RS00020 PF18053 DNA gyrase B subunit insert domain A1D48_RS00020 PF00204 DNA gyrase B A1D48_RS00055 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS00055 PF01627 Hpt domain A1D48_RS00055 PF00072 Response regulator receiver domain A1D48_RS00055 PF00672 HAMP domain A1D48_RS00055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS00060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A1D48_RS00065 PF00072 Response regulator receiver domain A1D48_RS00065 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS00070 PF03264 NapC/NirT cytochrome c family, N-terminal region A1D48_RS00075 PF00384 Molybdopterin oxidoreductase A1D48_RS00075 PF01568 Molydopterin dinucleotide binding domain A1D48_RS00075 PF18364 Molybdopterin oxidoreductase N-terminal domain A1D48_RS00080 PF02613 Nitrate reductase delta subunit A1D48_RS00085 PF14376 Haem-binding domain A1D48_RS00085 PF03150 Di-haem cytochrome c peroxidase A1D48_RS00085 PF00034 Cytochrome c A1D48_RS00090 PF00005 ABC transporter A1D48_RS00095 PF03379 CcmB protein A1D48_RS00100 PF01578 Cytochrome C assembly protein A1D48_RS00105 PF04995 Heme exporter protein D (CcmD) A1D48_RS00110 PF03100 CcmE A1D48_RS00115 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A1D48_RS00115 PF01578 Cytochrome C assembly protein A1D48_RS00120 PF08534 Redoxin A1D48_RS00125 PF03918 Cytochrome C biogenesis protein A1D48_RS00130 PF12566 Protein of unknown function (DUF3748) A1D48_RS00130 PF07676 WD40-like Beta Propeller Repeat A1D48_RS00135 PF07119 Protein of unknown function (DUF1375) A1D48_RS00140 PF00011 Hsp20/alpha crystallin family A1D48_RS00145 PF00011 Hsp20/alpha crystallin family A1D48_RS00150 PF02080 TrkA-C domain A1D48_RS00150 PF06826 Predicted Permease Membrane Region A1D48_RS00155 PF02656 Domain of unknown function (DUF202) A1D48_RS00160 PF02656 Domain of unknown function (DUF202) A1D48_RS00170 PF00291 Pyridoxal-phosphate dependent enzyme A1D48_RS00175 PF02447 GntP family permease A1D48_RS00180 PF03466 LysR substrate binding domain A1D48_RS00180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS00190 PF07690 Major Facilitator Superfamily A1D48_RS00200 PF13939 Toxin TisB, type I toxin-antitoxin system A1D48_RS00210 PF08049 IlvB leader peptide A1D48_RS00215 PF00205 Thiamine pyrophosphate enzyme, central domain A1D48_RS00215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A1D48_RS00215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A1D48_RS00220 PF01842 ACT domain A1D48_RS00225 PF00455 DeoR C terminal sensor domain A1D48_RS00225 PF08220 DeoR-like helix-turn-helix domain A1D48_RS00230 PF00294 pfkB family carbohydrate kinase A1D48_RS00235 PF07690 Major Facilitator Superfamily A1D48_RS00245 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS00245 PF00072 Response regulator receiver domain A1D48_RS00250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS00250 PF07730 Histidine kinase A1D48_RS00250 PF05231 MASE1 A1D48_RS00260 PF07690 Major Facilitator Superfamily A1D48_RS00265 PF06711 Protein of unknown function (DUF1198) A1D48_RS00270 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS00270 PF07702 UTRA domain A1D48_RS00275 PF08279 HTH domain A1D48_RS00275 PF05043 Mga helix-turn-helix domain A1D48_RS00275 PF00874 PRD domain A1D48_RS00275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A1D48_RS00280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A1D48_RS00285 PF03611 PTS system sugar-specific permease component A1D48_RS00295 PF01116 Fructose-bisphosphate aldolase class-II A1D48_RS00325 PF07690 Major Facilitator Superfamily A1D48_RS00330 PF00232 Glycosyl hydrolase family 1 A1D48_RS00340 PF00158 Sigma-54 interaction domain A1D48_RS00340 PF00874 PRD domain A1D48_RS00350 PF03610 PTS system fructose IIA component A1D48_RS00350 PF03830 PTS system sorbose subfamily IIB component A1D48_RS00355 PF03609 PTS system sorbose-specific iic component A1D48_RS00360 PF03613 PTS system mannose/fructose/sorbose family IID component A1D48_RS00365 PF03841 L-seryl-tRNA selenium transferase A1D48_RS00370 PF07071 KDGP aldolase A1D48_RS00375 PF04754 Putative transposase, YhgA-like A1D48_RS00380 PF00892 EamA-like transporter family A1D48_RS00385 PF02308 MgtC family A1D48_RS00390 PF00689 Cation transporting ATPase, C-terminus A1D48_RS00390 PF00690 Cation transporter/ATPase, N-terminus A1D48_RS00410 PF00857 Isochorismatase family A1D48_RS00420 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS00430 PF03797 Autotransporter beta-domain A1D48_RS00435 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS00475 PF13802 Galactose mutarotase-like A1D48_RS00475 PF01055 Glycosyl hydrolases family 31 A1D48_RS00480 PF05170 AsmA family A1D48_RS00485 PF00860 Permease family A1D48_RS00490 PF03616 Sodium/glutamate symporter A1D48_RS00495 PF17191 RecG wedge domain A1D48_RS00495 PF00271 Helicase conserved C-terminal domain A1D48_RS00495 PF00270 DEAD/DEAH box helicase A1D48_RS00500 PF00588 SpoU rRNA Methylase family A1D48_RS00500 PF12105 SpoU, rRNA methylase, C-terminal A1D48_RS00505 PF13291 ACT domain A1D48_RS00505 PF04607 Region found in RelA / SpoT proteins A1D48_RS00505 PF02824 TGS domain A1D48_RS00510 PF01192 RNA polymerase Rpb6 A1D48_RS00515 PF00625 Guanylate kinase A1D48_RS00520 PF03120 NAD-dependent DNA ligase OB-fold domain A1D48_RS00520 PF01653 NAD-dependent DNA ligase adenylation domain A1D48_RS00525 PF03458 UPF0126 domain A1D48_RS00535 PF03466 LysR substrate binding domain A1D48_RS00535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS00540 PF08340 Domain of unknown function (DUF1732) A1D48_RS00540 PF03755 YicC-like family, N-terminal region A1D48_RS00550 PF03725 3' exoribonuclease family, domain 2 A1D48_RS00550 PF01138 3' exoribonuclease family, domain 1 A1D48_RS00555 PF00156 Phosphoribosyl transferase domain A1D48_RS00560 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS00565 PF00692 dUTPase A1D48_RS00570 PF04127 DNA / pantothenate metabolism flavoprotein A1D48_RS00570 PF02441 Flavoprotein A1D48_RS00575 PF04002 RadC-like JAB domain A1D48_RS00580 PF00830 Ribosomal L28 family A1D48_RS00585 PF00471 Ribosomal protein L33 A1D48_RS00590 PF06827 Zinc finger found in FPG and IleRS A1D48_RS00590 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A1D48_RS00590 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A1D48_RS00595 PF01467 Cytidylyltransferase-like A1D48_RS00600 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A1D48_RS00605 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A1D48_RS00610 PF13439 Glycosyltransferase Family 4 A1D48_RS00610 PF00534 Glycosyl transferases group 1 A1D48_RS00625 PF00534 Glycosyl transferases group 1 A1D48_RS00625 PF13439 Glycosyltransferase Family 4 A1D48_RS00630 PF01501 Glycosyl transferase family 8 A1D48_RS00630 PF08437 Glycosyl transferase family 8 C-terminal A1D48_RS00635 PF08437 Glycosyl transferase family 8 C-terminal A1D48_RS00635 PF01501 Glycosyl transferase family 8 A1D48_RS00640 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) A1D48_RS00650 PF00534 Glycosyl transferases group 1 A1D48_RS00655 PF04932 O-Antigen ligase A1D48_RS00660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A1D48_RS00665 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A1D48_RS00670 PF01370 NAD dependent epimerase/dehydratase family A1D48_RS00675 PF00155 Aminotransferase class I and II A1D48_RS00680 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS00680 PF00107 Zinc-binding dehydrogenase A1D48_RS00685 PF00535 Glycosyl transferase family 2 A1D48_RS00690 PF04748 Divergent polysaccharide deacetylase A1D48_RS00695 PF01551 Peptidase family M23 A1D48_RS00700 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A1D48_RS00700 PF01676 Metalloenzyme superfamily A1D48_RS00705 PF00581 Rhodanese-like domain A1D48_RS00710 PF00462 Glutaredoxin A1D48_RS00715 PF02556 Preprotein translocase subunit SecB A1D48_RS00720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A1D48_RS00720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A1D48_RS00725 PF00132 Bacterial transferase hexapeptide (six repeats) A1D48_RS00725 PF06426 Serine acetyltransferase, N-terminal A1D48_RS00730 PF07690 Major Facilitator Superfamily A1D48_RS00735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A1D48_RS00735 PF13378 Enolase C-terminal domain-like A1D48_RS00745 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS00750 PF00588 SpoU rRNA Methylase family A1D48_RS00755 PF01070 FMN-dependent dehydrogenase A1D48_RS00760 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS00760 PF07729 FCD domain A1D48_RS00765 PF02652 L-lactate permease A1D48_RS00770 PF05662 Coiled stalk of trimeric autotransporter adhesin A1D48_RS00770 PF13018 Extended Signal Peptide of Type V secretion system A1D48_RS00770 PF03895 YadA-like membrane anchor domain A1D48_RS00770 PF05658 Head domain of trimeric autotransporter adhesin A1D48_RS00775 PF11622 Protein of unknown function (DUF3251) A1D48_RS00780 PF10928 Protein of unknown function (DUF2810) A1D48_RS00790 PF05068 Mannitol repressor A1D48_RS00795 PF08125 Mannitol dehydrogenase C-terminal domain A1D48_RS00795 PF01232 Mannitol dehydrogenase Rossmann domain A1D48_RS00800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A1D48_RS00800 PF02378 Phosphotransferase system, EIIC A1D48_RS00800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A1D48_RS00805 PF00043 Glutathione S-transferase, C-terminal domain A1D48_RS00805 PF13417 Glutathione S-transferase, N-terminal domain A1D48_RS00810 PF12390 Selenocysteine synthase N terminal A1D48_RS00810 PF03841 L-seryl-tRNA selenium transferase A1D48_RS00815 PF09107 Elongation factor SelB, winged helix A1D48_RS00815 PF09106 Elongation factor SelB, winged helix A1D48_RS00815 PF03144 Elongation factor Tu domain 2 A1D48_RS00815 PF00009 Elongation factor Tu GTP binding domain A1D48_RS00820 PF00480 ROK family A1D48_RS00825 PF00171 Aldehyde dehydrogenase family A1D48_RS00835 PF00596 Class II Aldolase and Adducin N-terminal domain A1D48_RS00840 PF01261 Xylose isomerase-like TIM barrel A1D48_RS00845 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A1D48_RS00850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A1D48_RS00850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A1D48_RS00855 PF03480 Bacterial extracellular solute-binding protein, family 7 A1D48_RS00860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A1D48_RS00865 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component A1D48_RS00870 PF16154 Domain of unknown function (DUF4862) A1D48_RS00875 PF04074 YhcH/YjgK/YiaL A1D48_RS00880 PF02615 Malate/L-lactate dehydrogenase A1D48_RS00885 PF01614 Bacterial transcriptional regulator A1D48_RS00885 PF09339 IclR helix-turn-helix domain A1D48_RS00890 PF13247 4Fe-4S dicluster domain A1D48_RS00895 PF00155 Aminotransferase class I and II A1D48_RS00900 PF00128 Alpha amylase, catalytic domain A1D48_RS00905 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A1D48_RS00910 PF12833 Helix-turn-helix domain A1D48_RS00925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A1D48_RS00925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A1D48_RS00930 PF05360 yiaA/B two helix domain A1D48_RS00935 PF01757 Acyltransferase family A1D48_RS00945 PF13983 YsaB-like lipoprotein A1D48_RS00950 PF02091 Glycyl-tRNA synthetase alpha subunit A1D48_RS00955 PF02092 Glycyl-tRNA synthetase beta subunit A1D48_RS00955 PF05746 DALR anticodon binding domain A1D48_RS00960 PF13333 Integrase core domain A1D48_RS00960 PF13276 HTH-like domain A1D48_RS00960 PF00665 Integrase core domain A1D48_RS00995 PF00313 'Cold-shock' DNA-binding domain A1D48_RS01000 PF01381 Helix-turn-helix A1D48_RS01005 PF11254 Protein of unknown function (DUF3053) A1D48_RS01010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A1D48_RS01010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A1D48_RS01015 PF13488 Glycine zipper A1D48_RS01015 PF00691 OmpA family A1D48_RS01020 PF18364 Molybdopterin oxidoreductase N-terminal domain A1D48_RS01020 PF01568 Molydopterin dinucleotide binding domain A1D48_RS01020 PF00384 Molybdopterin oxidoreductase A1D48_RS01025 PF00583 Acetyltransferase (GNAT) family A1D48_RS01030 PF03352 Methyladenine glycosylase A1D48_RS01035 PF03797 Autotransporter beta-domain A1D48_RS01040 PF00419 Fimbrial protein A1D48_RS01045 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS01045 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS01050 PF13953 PapC C-terminal domain A1D48_RS01050 PF00577 Outer membrane usher protein A1D48_RS01050 PF13954 PapC N-terminal domain A1D48_RS01055 PF00419 Fimbrial protein A1D48_RS01060 PF00419 Fimbrial protein A1D48_RS01065 PF00884 Sulfatase A1D48_RS01065 PF08019 Phosphoethanolamine transferase EptA/EptB A1D48_RS01090 PF00860 Permease family A1D48_RS01095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A1D48_RS01100 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS01105 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS01105 PF12911 N-terminal TM domain of oligopeptide transport permease C A1D48_RS01110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A1D48_RS01110 PF00005 ABC transporter A1D48_RS01115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A1D48_RS01115 PF00005 ABC transporter A1D48_RS01120 PF03222 Tryptophan/tyrosine permease family A1D48_RS01130 PF13940 Toxin Ldr, type I toxin-antitoxin system A1D48_RS01135 PF11658 Cellulose biosynthesis protein BcsG A1D48_RS01140 PF11120 Cellulose biosynthesis protein BcsF A1D48_RS01145 PF10995 Cellulose biosynthesis GIL A1D48_RS01150 PF10945 Cellulose biosynthesis protein BcsR A1D48_RS01155 PF06564 Cellulose biosynthesis protein BcsQ A1D48_RS01160 PF07238 PilZ domain A1D48_RS01160 PF00535 Glycosyl transferase family 2 A1D48_RS01165 PF03170 Bacterial cellulose synthase subunit A1D48_RS01170 PF01270 Glycosyl hydrolases family 8 A1D48_RS01175 PF13176 Tetratricopeptide repeat A1D48_RS01175 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) A1D48_RS01185 PF17154 Gammaproteobacterial periplasmic sensor domain A1D48_RS01185 PF00990 Diguanylate cyclase, GGDEF domain A1D48_RS01185 PF00672 HAMP domain A1D48_RS01185 PF00563 EAL domain A1D48_RS01190 PF00375 Sodium:dicarboxylate symporter family A1D48_RS01195 PF05193 Peptidase M16 inactive domain A1D48_RS01195 PF00675 Insulinase (Peptidase family M16) A1D48_RS01200 PF00294 pfkB family carbohydrate kinase A1D48_RS01205 PF00563 EAL domain A1D48_RS01210 PF05170 AsmA family A1D48_RS01215 PF00083 Sugar (and other) transporter A1D48_RS01215 PF07690 Major Facilitator Superfamily A1D48_RS01220 PF03631 Virulence factor BrkB A1D48_RS01225 PF03466 LysR substrate binding domain A1D48_RS01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS01230 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS01245 PF01204 Trehalase A1D48_RS01250 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS01250 PF07702 UTRA domain A1D48_RS01255 PF01380 SIS domain A1D48_RS01260 PF00294 pfkB family carbohydrate kinase A1D48_RS01265 PF03605 Anaerobic c4-dicarboxylate membrane transporter A1D48_RS01270 PF00710 Asparaginase, N-terminal A1D48_RS01270 PF17763 Glutaminase/Asparaginase C-terminal domain A1D48_RS01275 PF00294 pfkB family carbohydrate kinase A1D48_RS01280 PF01380 SIS domain A1D48_RS01280 PF01418 Helix-turn-helix domain, rpiR family A1D48_RS01285 PF01261 Xylose isomerase-like TIM barrel A1D48_RS01290 PF07690 Major Facilitator Superfamily A1D48_RS01295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A1D48_RS01295 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS01300 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ A1D48_RS01315 PF01432 Peptidase family M3 A1D48_RS01320 PF04445 Putative SAM-dependent methyltransferase A1D48_RS01325 PF00854 POT family A1D48_RS01330 PF00582 Universal stress protein family A1D48_RS01335 PF10625 Universal stress protein B (UspB) A1D48_RS01340 PF01384 Phosphate transporter family A1D48_RS01350 PF08722 TnsA endonuclease N terminal A1D48_RS01350 PF08721 TnsA endonuclease C terminal A1D48_RS01355 PF00665 Integrase core domain A1D48_RS01360 PF13401 AAA domain A1D48_RS01360 PF11426 Tn7 transposition regulator TnsC A1D48_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS01395 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS01395 PF00672 HAMP domain A1D48_RS01400 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS01400 PF00072 Response regulator receiver domain A1D48_RS01405 PF02321 Outer membrane efflux protein A1D48_RS01410 PF11604 Copper binding periplasmic protein CusF A1D48_RS01415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A1D48_RS01420 PF00873 AcrB/AcrD/AcrF family A1D48_RS01430 PF04945 YHS domain A1D48_RS01440 PF01551 Peptidase family M23 A1D48_RS01440 PF08525 Opacity-associated protein A N-terminal motif A1D48_RS01440 PF01476 LysM domain A1D48_RS01450 PF00394 Multicopper oxidase A1D48_RS01450 PF07731 Multicopper oxidase A1D48_RS01450 PF07732 Multicopper oxidase A1D48_RS01455 PF05275 Copper resistance protein B precursor (CopB) A1D48_RS01460 PF04234 CopC domain A1D48_RS01465 PF05425 Copper resistance protein D A1D48_RS01470 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS01470 PF00072 Response regulator receiver domain A1D48_RS01475 PF00672 HAMP domain A1D48_RS01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS01475 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS01485 PF13533 Biotin-lipoyl like A1D48_RS01490 PF00005 ABC transporter A1D48_RS01500 PF01402 Ribbon-helix-helix protein, copG family A1D48_RS01500 PF08753 NikR C terminal nickel binding domain A1D48_RS01505 PF01648 4'-phosphopantetheinyl transferase superfamily A1D48_RS01510 PF01594 AI-2E family transporter A1D48_RS01515 PF07690 Major Facilitator Superfamily A1D48_RS01520 PF08786 DcrB A1D48_RS01525 PF02592 Putative vitamin uptake transporter A1D48_RS01530 PF01206 Sulfurtransferase TusA A1D48_RS01535 PF00672 HAMP domain A1D48_RS01535 PF02203 Tar ligand binding domain homologue A1D48_RS01535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A1D48_RS01540 PF00403 Heavy-metal-associated domain A1D48_RS01545 PF07947 YhhN family A1D48_RS01550 PF10694 Protein of unknown function (DUF2500) A1D48_RS01555 PF06611 Protein of unknown function (DUF1145) A1D48_RS01565 PF00448 SRP54-type protein, GTPase domain A1D48_RS01565 PF02881 SRP54-type protein, helical bundle domain A1D48_RS01570 PF00005 ABC transporter A1D48_RS01575 PF02687 FtsX-like permease family A1D48_RS01575 PF18075 FtsX extracellular domain A1D48_RS01580 PF04542 Sigma-70 region 2 A1D48_RS01580 PF04545 Sigma-70, region 4 A1D48_RS01585 PF13458 Periplasmic binding protein A1D48_RS01595 PF12568 Acetyltransferase (GNAT) domain, PanZ A1D48_RS01600 PF13458 Periplasmic binding protein A1D48_RS01605 PF02653 Branched-chain amino acid transport system / permease component A1D48_RS01610 PF11862 Domain of unknown function (DUF3382) A1D48_RS01610 PF02653 Branched-chain amino acid transport system / permease component A1D48_RS01615 PF00005 ABC transporter A1D48_RS01615 PF12399 Branched-chain amino acid ATP-binding cassette transporter A1D48_RS01620 PF00005 ABC transporter A1D48_RS01630 PF13416 Bacterial extracellular solute-binding protein A1D48_RS01635 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS01640 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS01645 PF00005 ABC transporter A1D48_RS01645 PF17912 MalK OB fold domain A1D48_RS01650 PF03009 Glycerophosphoryl diester phosphodiesterase family A1D48_RS01655 PF10956 Protein of unknown function (DUF2756) A1D48_RS01665 PF02126 Phosphotriesterase family A1D48_RS01680 PF00294 pfkB family carbohydrate kinase A1D48_RS01685 PF00583 Acetyltransferase (GNAT) family A1D48_RS01695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A1D48_RS01695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A1D48_RS01700 PF17954 Quercetinase C-terminal cupin domain A1D48_RS01700 PF02678 Pirin A1D48_RS01705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A1D48_RS01705 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS01710 PF01202 Shikimate kinase A1D48_RS01715 PF02447 GntP family permease A1D48_RS01725 PF01118 Semialdehyde dehydrogenase, NAD binding domain A1D48_RS01725 PF02774 Semialdehyde dehydrogenase, dimerisation domain A1D48_RS01730 PF02806 Alpha amylase, C-terminal all-beta domain A1D48_RS01730 PF00128 Alpha amylase, catalytic domain A1D48_RS01730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A1D48_RS01735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A1D48_RS01735 PF00128 Alpha amylase, catalytic domain A1D48_RS01735 PF18390 Glycogen debranching enzyme C-terminal domain A1D48_RS01740 PF00483 Nucleotidyl transferase A1D48_RS01745 PF00534 Glycosyl transferases group 1 A1D48_RS01745 PF08323 Starch synthase catalytic domain A1D48_RS01750 PF00343 Carbohydrate phosphorylase A1D48_RS01755 PF09339 IclR helix-turn-helix domain A1D48_RS01755 PF01614 Bacterial transcriptional regulator A1D48_RS01760 PF00701 Dihydrodipicolinate synthetase family A1D48_RS01765 PF00920 Dehydratase family A1D48_RS01770 PF07690 Major Facilitator Superfamily A1D48_RS01775 PF00465 Iron-containing alcohol dehydrogenase A1D48_RS01790 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A1D48_RS01790 PF01266 FAD dependent oxidoreductase A1D48_RS01795 PF00581 Rhodanese-like domain A1D48_RS01800 PF01694 Rhomboid family A1D48_RS01800 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease A1D48_RS01805 PF08220 DeoR-like helix-turn-helix domain A1D48_RS01805 PF00455 DeoR C terminal sensor domain A1D48_RS01810 PF00158 Sigma-54 interaction domain A1D48_RS01810 PF06956 Regulator of RNA terminal phosphate cyclase A1D48_RS01820 PF01139 tRNA-splicing ligase RtcB A1D48_RS01825 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain A1D48_RS01825 PF01137 RNA 3'-terminal phosphate cyclase A1D48_RS01835 PF17874 MalT-like TPR region A1D48_RS01835 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS01840 PF00343 Carbohydrate phosphorylase A1D48_RS01845 PF02446 4-alpha-glucanotransferase A1D48_RS01850 PF02447 GntP family permease A1D48_RS01855 PF01106 NifU-like domain A1D48_RS01855 PF01521 Iron-sulphur cluster biosynthesis A1D48_RS01860 PF00156 Phosphoribosyl transferase domain A1D48_RS01865 PF00561 alpha/beta hydrolase fold A1D48_RS01870 PF04754 Putative transposase, YhgA-like A1D48_RS01875 PF09012 FeoC like transcriptional regulator A1D48_RS01880 PF07670 Nucleoside recognition A1D48_RS01880 PF02421 Ferrous iron transport protein B A1D48_RS01880 PF07664 Ferrous iron transport protein B C terminus A1D48_RS01880 PF17910 FeoB cytosolic helical domain A1D48_RS01885 PF04023 FeoA domain A1D48_RS01895 PF00575 S1 RNA binding domain A1D48_RS01895 PF16921 Tex protein YqgF-like domain A1D48_RS01895 PF09371 Tex-like protein N-terminal domain A1D48_RS01895 PF17674 HHH domain A1D48_RS01900 PF03449 Transcription elongation factor, N-terminal A1D48_RS01900 PF01272 Transcription elongation factor, GreA/GreB, C-term A1D48_RS01905 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS01905 PF00072 Response regulator receiver domain A1D48_RS01910 PF00672 HAMP domain A1D48_RS01910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS01910 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS01915 PF01293 Phosphoenolpyruvate carboxykinase A1D48_RS01920 PF13687 Domain of unknown function (DUF4153) A1D48_RS01925 PF01430 Hsp33 protein A1D48_RS01930 PF01479 S4 domain A1D48_RS01935 PF13419 Haloacid dehalogenase-like hydrolase A1D48_RS01940 PF07095 Intracellular growth attenuator protein IgaA A1D48_RS01945 PF00293 NUDIX domain A1D48_RS01950 PF00905 Penicillin binding protein transpeptidase domain A1D48_RS01950 PF00912 Transglycosylase A1D48_RS01950 PF17092 Penicillin-binding protein OB-like domain A1D48_RS01960 PF05137 Fimbrial assembly protein (PilN) A1D48_RS01970 PF10748 DNA utilization proteins HofP A1D48_RS01975 PF03958 Bacterial type II/III secretion system short domain A1D48_RS01975 PF00263 Bacterial type II and III secretion system protein A1D48_RS01985 PF01202 Shikimate kinase A1D48_RS01990 PF01761 3-dehydroquinate synthase A1D48_RS01995 PF05036 Sporulation related domain A1D48_RS02000 PF02086 D12 class N6 adenine-specific DNA methyltransferase A1D48_RS02005 PF00834 Ribulose-phosphate 3 epimerase family A1D48_RS02010 PF13419 Haloacid dehalogenase-like hydrolase A1D48_RS02015 PF00579 tRNA synthetases class I (W and Y) A1D48_RS02020 PF13978 Protein of unknown function (DUF4223) A1D48_RS02030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A1D48_RS02030 PF10414 Sirohaem synthase dimerisation region A1D48_RS02030 PF14824 Sirohaem biosynthesis protein central A1D48_RS02035 PF01226 Formate/nitrite transporter A1D48_RS02040 PF13806 Rieske-like [2Fe-2S] domain A1D48_RS02045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A1D48_RS02045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A1D48_RS02045 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS02045 PF18267 Rubredoxin NAD+ reductase C-terminal domain A1D48_RS02045 PF04324 BFD-like [2Fe-2S] binding domain A1D48_RS02050 PF07690 Major Facilitator Superfamily A1D48_RS02055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A1D48_RS02060 PF10832 Protein of unknown function (DUF2559) A1D48_RS02065 PF02661 Fic/DOC family A1D48_RS02070 PF00117 Glutamine amidotransferase class-I A1D48_RS02075 PF00202 Aminotransferase class-III A1D48_RS02080 PF12805 FUSC-like inner membrane protein yccS A1D48_RS02085 PF13545 Crp-like helix-turn-helix domain A1D48_RS02085 PF00027 Cyclic nucleotide-binding domain A1D48_RS02090 PF02566 OsmC-like protein A1D48_RS02095 PF00485 Phosphoribulokinase / Uridine kinase family A1D48_RS02100 PF06794 Uncharacterised protein family (UPF0270) A1D48_RS02105 PF00561 alpha/beta hydrolase fold A1D48_RS02115 PF08803 Putative mono-oxygenase ydhR A1D48_RS02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS02120 PF03466 LysR substrate binding domain A1D48_RS02125 PF12848 ABC transporter A1D48_RS02125 PF00005 ABC transporter A1D48_RS02130 PF02525 Flavodoxin-like fold A1D48_RS02135 PF00999 Sodium/hydrogen exchanger family A1D48_RS02135 PF02254 TrkA-N domain A1D48_RS02140 PF09526 Probable metal-binding protein (DUF2387) A1D48_RS02145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A1D48_RS02155 PF04102 SlyX A1D48_RS02160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A1D48_RS02160 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A1D48_RS02165 PF13309 HTH domain A1D48_RS02165 PF08348 YheO-like PAS domain A1D48_RS02170 PF02635 DsrE/DsrF-like family A1D48_RS02175 PF02635 DsrE/DsrF-like family A1D48_RS02180 PF04077 DsrH like protein A1D48_RS02185 PF00164 Ribosomal protein S12/S23 A1D48_RS02190 PF00177 Ribosomal protein S7p/S5e A1D48_RS02195 PF00009 Elongation factor Tu GTP binding domain A1D48_RS02195 PF14492 Elongation Factor G, domain II A1D48_RS02195 PF00679 Elongation factor G C-terminus A1D48_RS02195 PF03144 Elongation factor Tu domain 2 A1D48_RS02195 PF03764 Elongation factor G, domain IV A1D48_RS02200 PF03144 Elongation factor Tu domain 2 A1D48_RS02200 PF03143 Elongation factor Tu C-terminal domain A1D48_RS02200 PF00009 Elongation factor Tu GTP binding domain A1D48_RS02215 PF04324 BFD-like [2Fe-2S] binding domain A1D48_RS02220 PF00210 Ferritin-like domain A1D48_RS02225 PF01478 Type IV leader peptidase family A1D48_RS02235 PF00338 Ribosomal protein S10p/S20e A1D48_RS02240 PF00297 Ribosomal protein L3 A1D48_RS02245 PF00573 Ribosomal protein L4/L1 family A1D48_RS02250 PF00276 Ribosomal protein L23 A1D48_RS02255 PF00181 Ribosomal Proteins L2, RNA binding domain A1D48_RS02255 PF03947 Ribosomal Proteins L2, C-terminal domain A1D48_RS02260 PF00203 Ribosomal protein S19 A1D48_RS02265 PF00237 Ribosomal protein L22p/L17e A1D48_RS02270 PF07650 KH domain A1D48_RS02270 PF00189 Ribosomal protein S3, C-terminal domain A1D48_RS02275 PF00252 Ribosomal protein L16p/L10e A1D48_RS02280 PF00831 Ribosomal L29 protein A1D48_RS02285 PF00366 Ribosomal protein S17 A1D48_RS02290 PF00238 Ribosomal protein L14p/L23e A1D48_RS02295 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A1D48_RS02295 PF00467 KOW motif A1D48_RS02300 PF00281 Ribosomal protein L5 A1D48_RS02300 PF00673 ribosomal L5P family C-terminus A1D48_RS02305 PF00253 Ribosomal protein S14p/S29e A1D48_RS02310 PF00410 Ribosomal protein S8 A1D48_RS02315 PF00347 Ribosomal protein L6 A1D48_RS02320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A1D48_RS02325 PF00333 Ribosomal protein S5, N-terminal domain A1D48_RS02325 PF03719 Ribosomal protein S5, C-terminal domain A1D48_RS02330 PF00327 Ribosomal protein L30p/L7e A1D48_RS02335 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A1D48_RS02340 PF00344 SecY translocase A1D48_RS02345 PF00444 Ribosomal protein L36 A1D48_RS02350 PF00416 Ribosomal protein S13/S18 A1D48_RS02355 PF00411 Ribosomal protein S11 A1D48_RS02360 PF00163 Ribosomal protein S4/S9 N-terminal domain A1D48_RS02360 PF01479 S4 domain A1D48_RS02365 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A1D48_RS02365 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A1D48_RS02365 PF01000 RNA polymerase Rpb3/RpoA insert domain A1D48_RS02370 PF01196 Ribosomal protein L17 A1D48_RS02375 PF09350 Domain of unknown function (DUF1992) A1D48_RS02380 PF13411 MerR HTH family regulatory protein A1D48_RS02385 PF03889 Alternative ribosome-rescue factor A A1D48_RS02390 PF01741 Large-conductance mechanosensitive channel, MscL A1D48_RS02395 PF02080 TrkA-C domain A1D48_RS02395 PF02254 TrkA-N domain A1D48_RS02400 PF01189 16S rRNA methyltransferase RsmB/F A1D48_RS02400 PF01029 NusB family A1D48_RS02405 PF02911 Formyl transferase, C-terminal domain A1D48_RS02405 PF00551 Formyl transferase A1D48_RS02410 PF01327 Polypeptide deformylase A1D48_RS02415 PF17782 DprA winged helix domain A1D48_RS02415 PF02481 DNA recombination-mediator protein A A1D48_RS02420 PF04361 Protein of unknown function (DUF494) A1D48_RS02425 PF01396 Topoisomerase DNA binding C4 zinc finger A1D48_RS02430 PF01300 Telomere recombination A1D48_RS02435 PF01488 Shikimate / quinate 5-dehydrogenase A1D48_RS02435 PF08501 Shikimate dehydrogenase substrate binding domain A1D48_RS02435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A1D48_RS02440 PF07369 Protein of unknown function (DUF1488) A1D48_RS02445 PF00132 Bacterial transferase hexapeptide (six repeats) A1D48_RS02490 PF00873 AcrB/AcrD/AcrF family A1D48_RS02495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A1D48_RS02495 PF00529 HlyD membrane-fusion protein of T1SS A1D48_RS02500 PF08361 MAATS-type transcriptional repressor, C-terminal region A1D48_RS02500 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS02505 PF00563 EAL domain A1D48_RS02505 PF00990 Diguanylate cyclase, GGDEF domain A1D48_RS02505 PF03707 Bacterial signalling protein N terminal repeat A1D48_RS02510 PF10831 Protein of unknown function (DUF2556) A1D48_RS02515 PF01555 DNA methylase A1D48_RS02520 PF02954 Bacterial regulatory protein, Fis family A1D48_RS02525 PF01207 Dihydrouridine synthase (Dus) A1D48_RS02540 PF00474 Sodium:solute symporter family A1D48_RS02545 PF06196 Protein of unknown function (DUF997) A1D48_RS02550 PF02785 Biotin carboxylase C-terminal domain A1D48_RS02550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A1D48_RS02550 PF00289 Biotin carboxylase, N-terminal domain A1D48_RS02555 PF00364 Biotin-requiring enzyme A1D48_RS02560 PF01794 Ferric reductase like transmembrane component A1D48_RS02565 PF00174 Oxidoreductase molybdopterin binding domain A1D48_RS02570 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS02570 PF00107 Zinc-binding dehydrogenase A1D48_RS02575 PF00563 EAL domain A1D48_RS02575 PF00990 Diguanylate cyclase, GGDEF domain A1D48_RS02575 PF17157 Gammaproteobacterial periplasmic sensor domain A1D48_RS02595 PF04085 rod shape-determining protein MreC A1D48_RS02600 PF04093 rod shape-determining protein MreD A1D48_RS02605 PF02545 Maf-like protein A1D48_RS02610 PF10150 Ribonuclease E/G family A1D48_RS02610 PF00575 S1 RNA binding domain A1D48_RS02615 PF13116 Protein of unknown function A1D48_RS02615 PF13502 AsmA-like C-terminal region A1D48_RS02620 PF01523 Putative modulator of DNA gyrase A1D48_RS02625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS02625 PF03466 LysR substrate binding domain A1D48_RS02630 PF07869 Protein of unknown function (DUF1656) A1D48_RS02635 PF13533 Biotin-lipoyl like A1D48_RS02640 PF04632 Fusaric acid resistance protein family A1D48_RS02645 PF01337 Barstar (barnase inhibitor) A1D48_RS02650 PF07338 Protein of unknown function (DUF1471) A1D48_RS02655 PF07338 Protein of unknown function (DUF1471) A1D48_RS02660 PF01316 Arginine repressor, DNA binding domain A1D48_RS02660 PF02863 Arginine repressor, C-terminal domain A1D48_RS02665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A1D48_RS02665 PF00056 lactate/malate dehydrogenase, NAD binding domain A1D48_RS02670 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS02670 PF07702 UTRA domain A1D48_RS02680 PF00939 Sodium:sulfate symporter transmembrane region A1D48_RS02685 PF05681 Fumarate hydratase (Fumerase) A1D48_RS02690 PF05683 Fumarase C-terminus A1D48_RS02695 PF04277 Oxaloacetate decarboxylase, gamma chain A1D48_RS02700 PF02436 Conserved carboxylase domain A1D48_RS02700 PF00364 Biotin-requiring enzyme A1D48_RS02700 PF00682 HMGL-like A1D48_RS02705 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit A1D48_RS02710 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase A1D48_RS02715 PF13180 PDZ domain A1D48_RS02720 PF00595 PDZ domain A1D48_RS02720 PF13180 PDZ domain A1D48_RS02725 PF06295 Protein of unknown function (DUF1043) A1D48_RS02730 PF03969 AFG1-like ATPase A1D48_RS02735 PF00572 Ribosomal protein L13 A1D48_RS02740 PF00380 Ribosomal protein S9/S16 A1D48_RS02750 PF00043 Glutathione S-transferase, C-terminal domain A1D48_RS02750 PF02798 Glutathione S-transferase, N-terminal domain A1D48_RS02755 PF04386 Stringent starvation protein B A1D48_RS02760 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS02760 PF07729 FCD domain A1D48_RS02765 PF00701 Dihydrodipicolinate synthetase family A1D48_RS02770 PF07690 Major Facilitator Superfamily A1D48_RS02775 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase A1D48_RS02780 PF00480 ROK family A1D48_RS02785 PF04074 YhcH/YjgK/YiaL A1D48_RS02790 PF07969 Amidohydrolase family A1D48_RS02795 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A1D48_RS02800 PF17761 DUF1016 N-terminal domain A1D48_RS02800 PF06250 YhcG PDDEXK nuclease domain A1D48_RS02805 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS02805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A1D48_RS02810 PF04898 Glutamate synthase central domain A1D48_RS02810 PF01493 GXGXG motif A1D48_RS02810 PF00310 Glutamine amidotransferases class-II A1D48_RS02810 PF01645 Conserved region in glutamate synthase A1D48_RS02825 PF04055 Radical SAM superfamily A1D48_RS02825 PF16199 Radical_SAM C-terminal domain A1D48_RS02830 PF00072 Response regulator receiver domain A1D48_RS02830 PF01627 Hpt domain A1D48_RS02830 PF18415 Histidine kinase receptor ArcB trans-membrane domain A1D48_RS02830 PF00989 PAS fold A1D48_RS02830 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS02840 PF00912 Transglycosylase A1D48_RS02845 PF10707 PhoP regulatory network protein YrbL A1D48_RS02855 PF00381 PTS HPr component phosphorylation site A1D48_RS02860 PF03668 P-loop ATPase protein family A1D48_RS02865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A1D48_RS02870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A1D48_RS02875 PF04963 Sigma-54 factor, core binding domain A1D48_RS02875 PF04552 Sigma-54, DNA binding domain A1D48_RS02875 PF00309 Sigma-54 factor, Activator interacting domain (AID) A1D48_RS02880 PF00005 ABC transporter A1D48_RS02880 PF12399 Branched-chain amino acid ATP-binding cassette transporter A1D48_RS02885 PF03968 OstA-like protein A1D48_RS02890 PF06835 Lipopolysaccharide-assembly, LptC-related A1D48_RS02900 PF01380 SIS domain A1D48_RS02900 PF00571 CBS domain A1D48_RS02905 PF01699 Sodium/calcium exchanger protein A1D48_RS02910 PF00005 ABC transporter A1D48_RS02915 PF02405 Permease MlaE A1D48_RS02920 PF02470 MlaD protein A1D48_RS02925 PF05494 MlaC protein A1D48_RS02930 PF13466 STAS domain A1D48_RS02935 PF01722 BolA-like protein A1D48_RS02940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A1D48_RS02945 PF13693 Winged helix-turn-helix DNA-binding A1D48_RS02950 PF00348 Polyprenyl synthetase A1D48_RS02955 PF00829 Ribosomal prokaryotic L21 protein A1D48_RS02960 PF01016 Ribosomal L27 protein A1D48_RS02965 PF00892 EamA-like transporter family A1D48_RS02970 PF01018 GTP1/OBG A1D48_RS02970 PF01926 50S ribosome-binding GTPase A1D48_RS02975 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family A1D48_RS02980 PF01272 Transcription elongation factor, GreA/GreB, C-term A1D48_RS02980 PF03449 Transcription elongation factor, N-terminal A1D48_RS02985 PF01985 CRS1 / YhbY (CRM) domain A1D48_RS02990 PF01728 FtsJ-like methyltransferase A1D48_RS03000 PF00004 ATPase family associated with various cellular activities (AAA) A1D48_RS03000 PF17862 AAA+ lid domain A1D48_RS03000 PF06480 FtsH Extracellular A1D48_RS03000 PF01434 Peptidase family M41 A1D48_RS03005 PF00809 Pterin binding enzyme A1D48_RS03010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A1D48_RS03010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A1D48_RS03010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A1D48_RS03010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A1D48_RS03015 PF03840 Preprotein translocase SecG subunit A1D48_RS03030 PF00764 Arginosuccinate synthase A1D48_RS03040 PF02576 RimP N-terminal domain A1D48_RS03040 PF17384 RimP C-terminal SH3 domain A1D48_RS03045 PF13184 NusA-like KH domain A1D48_RS03045 PF08529 NusA N-terminal domain A1D48_RS03050 PF11987 Translation-initiation factor 2 A1D48_RS03050 PF00009 Elongation factor Tu GTP binding domain A1D48_RS03050 PF08364 Bacterial translation initiation factor IF-2 associated region A1D48_RS03050 PF04760 Translation initiation factor IF-2, N-terminal region A1D48_RS03055 PF02033 Ribosome-binding factor A A1D48_RS03060 PF01509 TruB family pseudouridylate synthase (N terminal domain) A1D48_RS03060 PF16198 tRNA pseudouridylate synthase B C-terminal domain A1D48_RS03060 PF09157 Pseudouridine synthase II TruB, C-terminal A1D48_RS03065 PF00312 Ribosomal protein S15 A1D48_RS03070 PF03725 3' exoribonuclease family, domain 2 A1D48_RS03070 PF00575 S1 RNA binding domain A1D48_RS03070 PF01138 3' exoribonuclease family, domain 1 A1D48_RS03070 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A1D48_RS03070 PF00013 KH domain A1D48_RS03075 PF13181 Tetratricopeptide repeat A1D48_RS03075 PF07719 Tetratricopeptide repeat A1D48_RS03080 PF00271 Helicase conserved C-terminal domain A1D48_RS03080 PF12343 Cold shock protein DEAD box A A1D48_RS03080 PF00270 DEAD/DEAH box helicase A1D48_RS03080 PF03880 DbpA RNA binding domain A1D48_RS03085 PF03222 Tryptophan/tyrosine permease family A1D48_RS03090 PF00296 Luciferase-like monooxygenase A1D48_RS03095 PF01136 Peptidase family U32 A1D48_RS03100 PF01136 Peptidase family U32 A1D48_RS03105 PF02036 SCP-2 sterol transfer family A1D48_RS03110 PF13508 Acetyltransferase (GNAT) domain A1D48_RS03115 PF01541 GIY-YIG catalytic domain A1D48_RS03125 PF01965 DJ-1/PfpI family A1D48_RS03130 PF13460 NAD(P)H-binding A1D48_RS03135 PF04972 BON domain A1D48_RS03140 PF13580 SIS domain A1D48_RS03145 PF02021 Uncharacterised protein family UPF0102 A1D48_RS03150 PF04348 LppC putative lipoprotein A1D48_RS03155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A1D48_RS03160 PF08220 DeoR-like helix-turn-helix domain A1D48_RS03165 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS03165 PF00107 Zinc-binding dehydrogenase A1D48_RS03170 PF03611 PTS system sugar-specific permease component A1D48_RS03175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A1D48_RS03180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A1D48_RS03185 PF08013 Tagatose 6 phosphate kinase A1D48_RS03190 PF01116 Fructose-bisphosphate aldolase class-II A1D48_RS03195 PF08666 SAF domain A1D48_RS03195 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus A1D48_RS03200 PF03328 HpcH/HpaI aldolase/citrate lyase family A1D48_RS03205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A1D48_RS03205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A1D48_RS03210 PF02595 Glycerate kinase family A1D48_RS03240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS03240 PF03466 LysR substrate binding domain A1D48_RS03245 PF00291 Pyridoxal-phosphate dependent enzyme A1D48_RS03250 PF03222 Tryptophan/tyrosine permease family A1D48_RS03255 PF00871 Acetokinase family A1D48_RS03260 PF02901 Pyruvate formate lyase-like A1D48_RS03260 PF01228 Glycine radical A1D48_RS03265 PF03313 Serine dehydratase alpha chain A1D48_RS03265 PF03315 Serine dehydratase beta chain A1D48_RS03275 PF03313 Serine dehydratase alpha chain A1D48_RS03285 PF02678 Pirin A1D48_RS03285 PF17954 Quercetinase C-terminal cupin domain A1D48_RS03290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS03290 PF03466 LysR substrate binding domain A1D48_RS03295 PF05656 Protein of unknown function (DUF805) A1D48_RS03300 PF13409 Glutathione S-transferase, N-terminal domain A1D48_RS03305 PF07681 DoxX A1D48_RS03310 PF13997 YqjK-like protein A1D48_RS03315 PF07332 Putative Actinobacterial Holin-X, holin superfamily III A1D48_RS03320 PF05957 Bacterial protein of unknown function (DUF883) A1D48_RS03325 PF06476 Protein of unknown function (DUF1090) A1D48_RS03330 PF13721 SecD export protein N-terminal TM region A1D48_RS03335 PF09335 SNARE associated Golgi protein A1D48_RS03345 PF00375 Sodium:dicarboxylate symporter family A1D48_RS03350 PF03741 Integral membrane protein TerC family A1D48_RS03355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A1D48_RS03360 PF02698 DUF218 domain A1D48_RS03365 PF01863 Protein of unknown function DUF45 A1D48_RS03370 PF05175 Methyltransferase small domain A1D48_RS03375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A1D48_RS03375 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS03380 PF00202 Aminotransferase class-III A1D48_RS03390 PF08447 PAS fold A1D48_RS03390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A1D48_RS03400 PF03551 Transcriptional regulator PadR-like family A1D48_RS03405 PF04954 Siderophore-interacting protein A1D48_RS03405 PF08021 Siderophore-interacting FAD-binding domain A1D48_RS03510 PF03354 Phage Terminase A1D48_RS03530 PF03167 Uracil DNA glycosylase superfamily A1D48_RS03535 PF04545 Sigma-70, region 4 A1D48_RS03535 PF04542 Sigma-70 region 2 A1D48_RS03535 PF04539 Sigma-70 region 3 A1D48_RS03535 PF00140 Sigma-70 factor, region 1.2 A1D48_RS03535 PF03979 Sigma-70 factor, region 1.1 A1D48_RS03535 PF04546 Sigma-70, non-essential region A1D48_RS03540 PF10410 DnaB-helicase binding domain of primase A1D48_RS03540 PF08275 DNA primase catalytic core, N-terminal domain A1D48_RS03540 PF01807 CHC2 zinc finger A1D48_RS03540 PF08278 DNA primase DnaG DnaB-binding A1D48_RS03545 PF01165 Ribosomal protein S21 A1D48_RS03550 PF00814 Glycoprotease family A1D48_RS03560 PF02660 Glycerol-3-phosphate acyltransferase A1D48_RS03565 PF02152 Dihydroneopterin aldolase A1D48_RS03570 PF02673 Bacitracin resistance protein BacA A1D48_RS03575 PF01966 HD domain A1D48_RS03575 PF01743 Poly A polymerase head domain A1D48_RS03575 PF12627 Probable RNA and SrmB- binding site of polymerase A A1D48_RS03580 PF08239 Bacterial SH3 domain A1D48_RS03590 PF01928 CYTH domain A1D48_RS03595 PF03710 Glutamate-ammonia ligase adenylyltransferase A1D48_RS03595 PF08335 GlnD PII-uridylyltransferase A1D48_RS03600 PF01467 Cytidylyltransferase-like A1D48_RS03600 PF00294 pfkB family carbohydrate kinase A1D48_RS03610 PF01145 SPFH domain / Band 7 family A1D48_RS03610 PF15975 Flotillin A1D48_RS03615 PF07290 Protein of unknown function (DUF1449) A1D48_RS03620 PF08971 Glycogen synthesis protein A1D48_RS03625 PF04380 Membrane fusogenic activity A1D48_RS03630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A1D48_RS03635 PF02600 Disulfide bond formation protein DsbB A1D48_RS03640 PF01323 DSBA-like thioredoxin domain A1D48_RS03645 PF17425 Arylsulfotransferase Ig-like domain A1D48_RS03645 PF05935 Arylsulfotransferase (ASST) A1D48_RS03655 PF02535 ZIP Zinc transporter A1D48_RS03665 PF03738 Glutathionylspermidine synthase preATP-grasp A1D48_RS03670 PF06693 Protein of unknown function (DUF1190) A1D48_RS03680 PF02321 Outer membrane efflux protein A1D48_RS03685 PF00293 NUDIX domain A1D48_RS03690 PF06853 Protein of unknown function (DUF1249) A1D48_RS03695 PF00149 Calcineurin-like phosphoesterase A1D48_RS03700 PF05728 Uncharacterised protein family (UPF0227) A1D48_RS03705 PF00204 DNA gyrase B A1D48_RS03705 PF01751 Toprim domain A1D48_RS03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS03705 PF00986 DNA gyrase B subunit, carboxyl terminus A1D48_RS03710 PF03992 Antibiotic biosynthesis monooxygenase A1D48_RS03715 PF02525 Flavodoxin-like fold A1D48_RS03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS03720 PF08521 Two-component sensor kinase N-terminal A1D48_RS03720 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS03725 PF00072 Response regulator receiver domain A1D48_RS03725 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS03730 PF04076 Bacterial OB fold (BOF) protein A1D48_RS03735 PF06445 GyrI-like small molecule binding domain A1D48_RS03740 PF00521 DNA gyrase/topoisomerase IV, subunit A A1D48_RS03740 PF03989 DNA gyrase C-terminal domain, beta-propeller A1D48_RS03745 PF01553 Acyltransferase A1D48_RS03750 PF07731 Multicopper oxidase A1D48_RS03750 PF07732 Multicopper oxidase A1D48_RS03750 PF00394 Multicopper oxidase A1D48_RS03755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A1D48_RS03765 PF03480 Bacterial extracellular solute-binding protein, family 7 A1D48_RS03770 PF11842 Domain of unknown function (DUF3362) A1D48_RS03770 PF04055 Radical SAM superfamily A1D48_RS03770 PF08497 Radical SAM N-terminal A1D48_RS03785 PF00939 Sodium:sulfate symporter transmembrane region A1D48_RS03790 PF00248 Aldo/keto reductase family A1D48_RS03795 PF00465 Iron-containing alcohol dehydrogenase A1D48_RS03800 PF12833 Helix-turn-helix domain A1D48_RS03800 PF06719 AraC-type transcriptional regulator N-terminus A1D48_RS03805 PF09335 SNARE associated Golgi protein A1D48_RS03810 PF01053 Cys/Met metabolism PLP-dependent enzyme A1D48_RS03820 PF01618 MotA/TolQ/ExbB proton channel family A1D48_RS03825 PF02472 Biopolymer transport protein ExbD/TolR A1D48_RS03855 PF03350 Uncharacterized protein family, UPF0114 A1D48_RS03860 PF00672 HAMP domain A1D48_RS03860 PF02203 Tar ligand binding domain homologue A1D48_RS03860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A1D48_RS03865 PF11115 Protein of unknown function (DUF2623) A1D48_RS03875 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal A1D48_RS03875 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A1D48_RS03880 PF13247 4Fe-4S dicluster domain A1D48_RS03885 PF03916 Polysulphide reductase, NrfD A1D48_RS03890 PF00374 Nickel-dependent hydrogenase A1D48_RS03895 PF01750 Hydrogenase maturation protease A1D48_RS03900 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE A1D48_RS03905 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA A1D48_RS03910 PF01455 HupF/HypC family A1D48_RS03915 PF01497 Periplasmic binding protein A1D48_RS03925 PF02798 Glutathione S-transferase, N-terminal domain A1D48_RS03930 PF05257 CHAP domain A1D48_RS03930 PF03738 Glutathionylspermidine synthase preATP-grasp A1D48_RS03940 PF02614 Glucuronate isomerase A1D48_RS03945 PF08125 Mannitol dehydrogenase C-terminal domain A1D48_RS03945 PF01232 Mannitol dehydrogenase Rossmann domain A1D48_RS03950 PF03786 D-mannonate dehydratase (UxuA) A1D48_RS03955 PF07690 Major Facilitator Superfamily A1D48_RS03965 PF01522 Polysaccharide deacetylase A1D48_RS03975 PF04965 Gene 25-like lysozyme A1D48_RS03980 PF00171 Aldehyde dehydrogenase family A1D48_RS03985 PF01266 FAD dependent oxidoreductase A1D48_RS03995 PF13520 Amino acid permease A1D48_RS04005 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS04045 PF01320 Colicin immunity protein / pyocin immunity protein A1D48_RS04055 PF01320 Colicin immunity protein / pyocin immunity protein A1D48_RS04090 PF04474 Protein of unknown function (DUF554) A1D48_RS04100 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A1D48_RS04100 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A1D48_RS04100 PF01276 Orn/Lys/Arg decarboxylase, major domain A1D48_RS04105 PF03825 Nucleoside H+ symporter A1D48_RS04110 PF01464 Transglycosylase SLT domain A1D48_RS04110 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain A1D48_RS04115 PF04362 Bacterial Fe(2+) trafficking A1D48_RS04120 PF14815 NUDIX domain A1D48_RS04120 PF00730 HhH-GPD superfamily base excision DNA repair protein A1D48_RS04120 PF00633 Helix-hairpin-helix motif A1D48_RS04130 PF02390 Putative methyltransferase A1D48_RS04135 PF04320 Protein with unknown function (DUF469) A1D48_RS04140 PF11101 Protein of unknown function (DUF2884) A1D48_RS04145 PF17763 Glutaminase/Asparaginase C-terminal domain A1D48_RS04145 PF00710 Asparaginase, N-terminal A1D48_RS04150 PF06717 Protein of unknown function (DUF1202) A1D48_RS04155 PF04055 Radical SAM superfamily A1D48_RS04155 PF06969 HemN C-terminal domain A1D48_RS04160 PF01725 Ham1 family A1D48_RS04165 PF02594 Uncharacterised ACR, YggU family COG1872 A1D48_RS04170 PF02325 YGGT family A1D48_RS04175 PF01168 Alanine racemase, N-terminal domain A1D48_RS04180 PF00437 Type II/IV secretion system protein A1D48_RS04190 PF03652 Holliday junction resolvase A1D48_RS04195 PF02622 Uncharacterized ACR, COG1678 A1D48_RS04200 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A1D48_RS04200 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A1D48_RS04205 PF04452 RNA methyltransferase A1D48_RS04210 PF04231 Endonuclease I A1D48_RS04215 PF17283 SprT-like zinc ribbon domain A1D48_RS04215 PF10263 SprT-like family A1D48_RS04220 PF00083 Sugar (and other) transporter A1D48_RS04225 PF00438 S-adenosylmethionine synthetase, N-terminal domain A1D48_RS04225 PF02772 S-adenosylmethionine synthetase, central domain A1D48_RS04225 PF02773 S-adenosylmethionine synthetase, C-terminal domain A1D48_RS04245 PF17810 Arginine decarboxylase helical bundle domain A1D48_RS04245 PF17944 Arginine decarboxylase C-terminal helical extension A1D48_RS04245 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A1D48_RS04255 PF07729 FCD domain A1D48_RS04255 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS04265 PF13378 Enolase C-terminal domain-like A1D48_RS04265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A1D48_RS04275 PF08125 Mannitol dehydrogenase C-terminal domain A1D48_RS04275 PF01232 Mannitol dehydrogenase Rossmann domain A1D48_RS04280 PF00107 Zinc-binding dehydrogenase A1D48_RS04280 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS04285 PF02615 Malate/L-lactate dehydrogenase A1D48_RS04290 PF04074 YhcH/YjgK/YiaL A1D48_RS04295 PF12697 Alpha/beta hydrolase family A1D48_RS04300 PF00491 Arginase family A1D48_RS04310 PF01435 Peptidase family M48 A1D48_RS04315 PF00456 Transketolase, thiamine diphosphate binding domain A1D48_RS04315 PF02780 Transketolase, C-terminal domain A1D48_RS04315 PF02779 Transketolase, pyrimidine binding domain A1D48_RS04320 PF00005 ABC transporter A1D48_RS04325 PF00005 ABC transporter A1D48_RS04350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A1D48_RS04350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A1D48_RS04355 PF00162 Phosphoglycerate kinase A1D48_RS04360 PF01116 Fructose-bisphosphate aldolase class-II A1D48_RS04365 PF05552 Conserved TM helix A1D48_RS04365 PF00924 Mechanosensitive ion channel A1D48_RS04370 PF01810 LysE type translocator A1D48_RS04375 PF04402 Protein of unknown function (DUF541) A1D48_RS04385 PF03466 LysR substrate binding domain A1D48_RS04385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS04390 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A1D48_RS04395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A1D48_RS04395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A1D48_RS04395 PF01842 ACT domain A1D48_RS04400 PF01812 5-formyltetrahydrofolate cyclo-ligase family A1D48_RS04410 PF05164 Cell division protein ZapA A1D48_RS04420 PF03695 Uncharacterised protein family (UPF0149) A1D48_RS04425 PF05195 Aminopeptidase P, N-terminal domain A1D48_RS04425 PF00557 Metallopeptidase family M24 A1D48_RS04430 PF01494 FAD binding domain A1D48_RS04435 PF01494 FAD binding domain A1D48_RS04440 PF01571 Aminomethyltransferase folate-binding domain A1D48_RS04440 PF08669 Glycine cleavage T-protein C-terminal barrel domain A1D48_RS04445 PF01597 Glycine cleavage H-protein A1D48_RS04450 PF02347 Glycine cleavage system P-protein A1D48_RS04465 PF00232 Glycosyl hydrolase family 1 A1D48_RS04470 PF04266 ASCH domain A1D48_RS04475 PF03006 Haemolysin-III related A1D48_RS04485 PF01571 Aminomethyltransferase folate-binding domain A1D48_RS04495 PF03937 Flavinator of succinate dehydrogenase A1D48_RS04500 PF07254 Membrane-bound toxin component of toxin-antitoxin system A1D48_RS04505 PF00258 Flavodoxin A1D48_RS04510 PF00589 Phage integrase family A1D48_RS04510 PF02899 Phage integrase, N-terminal SAM-like domain A1D48_RS04515 PF10411 Disulfide bond isomerase protein N-terminus A1D48_RS04515 PF13098 Thioredoxin-like domain A1D48_RS04520 PF17768 RecJ OB domain A1D48_RS04520 PF01368 DHH family A1D48_RS04520 PF02272 DHHA1 domain A1D48_RS04530 PF01336 OB-fold nucleic acid binding domain A1D48_RS04530 PF00152 tRNA synthetases class II (D, K and N) A1D48_RS04535 PF00293 NUDIX domain A1D48_RS04545 PF01476 LysM domain A1D48_RS04545 PF01551 Peptidase family M23 A1D48_RS04575 PF13505 Outer membrane protein beta-barrel domain A1D48_RS04585 PF00419 Fimbrial protein A1D48_RS04590 PF13953 PapC C-terminal domain A1D48_RS04590 PF00577 Outer membrane usher protein A1D48_RS04590 PF13954 PapC N-terminal domain A1D48_RS04595 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS04595 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS04615 PF03824 High-affinity nickel-transport protein A1D48_RS04620 PF02583 Metal-sensitive transcriptional repressor A1D48_RS04625 PF03222 Tryptophan/tyrosine permease family A1D48_RS04635 PF03466 LysR substrate binding domain A1D48_RS04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS04640 PF02803 Thiolase, C-terminal domain A1D48_RS04640 PF00108 Thiolase, N-terminal domain A1D48_RS04650 PF04962 KduI/IolB family A1D48_RS04660 PF00083 Sugar (and other) transporter A1D48_RS04665 PF01177 Asp/Glu/Hydantoin racemase A1D48_RS04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS04670 PF03466 LysR substrate binding domain A1D48_RS04675 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A1D48_RS04675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A1D48_RS04680 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS04685 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS04700 PF01553 Acyltransferase A1D48_RS04700 PF00501 AMP-binding enzyme A1D48_RS04705 PF07690 Major Facilitator Superfamily A1D48_RS04710 PF00248 Aldo/keto reductase family A1D48_RS04715 PF06004 Bacterial protein of unknown function (DUF903) A1D48_RS04720 PF03741 Integral membrane protein TerC family A1D48_RS04725 PF02976 DNA mismatch repair enzyme MutH A1D48_RS04730 PF00293 NUDIX domain A1D48_RS04735 PF05524 PEP-utilising enzyme, N-terminal A1D48_RS04735 PF00391 PEP-utilising enzyme, mobile domain A1D48_RS04735 PF01590 GAF domain A1D48_RS04735 PF02896 PEP-utilising enzyme, TIM barrel domain A1D48_RS04740 PF01790 Prolipoprotein diacylglyceryl transferase A1D48_RS04745 PF00303 Thymidylate synthase A1D48_RS04755 PF07963 Prokaryotic N-terminal methylation motif A1D48_RS04760 PF07963 Prokaryotic N-terminal methylation motif A1D48_RS04765 PF10713 Protein of unknown function (DUF2509) A1D48_RS04770 PF07963 Prokaryotic N-terminal methylation motif A1D48_RS04770 PF12528 Type II secretion prepilin peptidase dependent protein C A1D48_RS04775 PF17946 RecC C-terminal domain A1D48_RS04780 PF05193 Peptidase M16 inactive domain A1D48_RS04780 PF16187 Middle or third domain of peptidase_M16 A1D48_RS04780 PF00675 Insulinase (Peptidase family M16) A1D48_RS04785 PF00580 UvrD/REP helicase N-terminal domain A1D48_RS04785 PF12705 PD-(D/E)XK nuclease superfamily A1D48_RS04785 PF13361 UvrD-like helicase C-terminal domain A1D48_RS04790 PF13538 UvrD-like helicase C-terminal domain A1D48_RS04795 PF00696 Amino acid kinase family A1D48_RS04795 PF00583 Acetyltransferase (GNAT) family A1D48_RS04800 PF01520 N-acetylmuramoyl-L-alanine amidase A1D48_RS04800 PF11741 AMIN domain A1D48_RS04815 PF06725 3D domain A1D48_RS04815 PF03562 MltA specific insert domain A1D48_RS04820 PF00899 ThiF family A1D48_RS04825 PF00892 EamA-like transporter family A1D48_RS04830 PF02657 Fe-S metabolism associated domain A1D48_RS04835 PF00266 Aminotransferase class-V A1D48_RS04840 PF06004 Bacterial protein of unknown function (DUF903) A1D48_RS04845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS04845 PF03466 LysR substrate binding domain A1D48_RS04850 PF04241 Protein of unknown function (DUF423) A1D48_RS04855 PF01728 FtsJ-like methyltransferase A1D48_RS04855 PF18125 RlmM ferredoxin-like domain A1D48_RS04860 PF00455 DeoR C terminal sensor domain A1D48_RS04860 PF08220 DeoR-like helix-turn-helix domain A1D48_RS04865 PF05025 RbsD / FucU transport protein family A1D48_RS04870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A1D48_RS04870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A1D48_RS04875 PF07882 L-fucose isomerase, second N-terminal domain A1D48_RS04875 PF02952 L-fucose isomerase, C-terminal domain A1D48_RS04875 PF07881 L-fucose isomerase, first N-terminal domain A1D48_RS04880 PF07690 Major Facilitator Superfamily A1D48_RS04885 PF00596 Class II Aldolase and Adducin N-terminal domain A1D48_RS04890 PF00465 Iron-containing alcohol dehydrogenase A1D48_RS04895 PF01367 5'-3' exonuclease, C-terminal SAM fold A1D48_RS04895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A1D48_RS04905 PF03315 Serine dehydratase beta chain A1D48_RS04905 PF03313 Serine dehydratase alpha chain A1D48_RS04915 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases A1D48_RS04915 PF11892 Domain of unknown function (DUF3412) A1D48_RS04915 PF03641 Possible lysine decarboxylase A1D48_RS04920 PF14489 QueF-like protein A1D48_RS04920 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term A1D48_RS04925 PF07348 Syd protein (SUKH-2) A1D48_RS04935 PF04287 tRNA pseudouridine synthase C A1D48_RS04940 PF00849 RNA pseudouridylate synthase A1D48_RS04945 PF00258 Flavodoxin A1D48_RS04955 PF07690 Major Facilitator Superfamily A1D48_RS04960 PF13378 Enolase C-terminal domain-like A1D48_RS04960 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A1D48_RS04965 PF13378 Enolase C-terminal domain-like A1D48_RS04970 PF02595 Glycerate kinase family A1D48_RS04975 PF00672 HAMP domain A1D48_RS04975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS04975 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS04975 PF01627 Hpt domain A1D48_RS04975 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A1D48_RS04975 PF00072 Response regulator receiver domain A1D48_RS04980 PF05958 tRNA (Uracil-5-)-methyltransferase A1D48_RS04980 PF01938 TRAM domain A1D48_RS04985 PF04607 Region found in RelA / SpoT proteins A1D48_RS04985 PF13291 ACT domain A1D48_RS04985 PF02824 TGS domain A1D48_RS05010 PF00419 Fimbrial protein A1D48_RS05020 PF00419 Fimbrial protein A1D48_RS05025 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS05025 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS05030 PF00577 Outer membrane usher protein A1D48_RS05030 PF13954 PapC N-terminal domain A1D48_RS05030 PF13953 PapC C-terminal domain A1D48_RS05035 PF00419 Fimbrial protein A1D48_RS05040 PF03819 MazG nucleotide pyrophosphohydrolase domain A1D48_RS05045 PF06418 CTP synthase N-terminus A1D48_RS05045 PF00117 Glutamine amidotransferase class-I A1D48_RS05050 PF03952 Enolase, N-terminal domain A1D48_RS05050 PF00113 Enolase, C-terminal TIM barrel domain A1D48_RS05055 PF04055 Radical SAM superfamily A1D48_RS05060 PF03099 Biotin/lipoate A/B protein ligase family A1D48_RS05060 PF12706 Beta-lactamase superfamily domain A1D48_RS05065 PF01242 6-pyruvoyl tetrahydropterin synthase A1D48_RS05075 PF00667 FAD binding domain A1D48_RS05075 PF00258 Flavodoxin A1D48_RS05075 PF00175 Oxidoreductase NAD-binding domain A1D48_RS05080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A1D48_RS05080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A1D48_RS05090 PF01507 Phosphoadenosine phosphosulfate reductase family A1D48_RS05095 PF11047 Salmonella outer protein D A1D48_RS05100 PF00270 DEAD/DEAH box helicase A1D48_RS05100 PF18019 HD domain A1D48_RS05100 PF00271 Helicase conserved C-terminal domain A1D48_RS05115 PF09344 CT1975-like protein A1D48_RS05120 PF09704 CRISPR-associated protein (Cas_Cas5) A1D48_RS05130 PF01867 CRISPR associated protein Cas1 A1D48_RS05135 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) A1D48_RS05140 PF04389 Peptidase family M28 A1D48_RS05145 PF01507 Phosphoadenosine phosphosulfate reductase family A1D48_RS05150 PF00009 Elongation factor Tu GTP binding domain A1D48_RS05160 PF12084 Protein of unknown function (DUF3561) A1D48_RS05165 PF04977 Septum formation initiator A1D48_RS05170 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A1D48_RS05175 PF02542 YgbB family A1D48_RS05180 PF01142 tRNA pseudouridine synthase D (TruD) A1D48_RS05185 PF01975 Survival protein SurE A1D48_RS05195 PF01551 Peptidase family M23 A1D48_RS05195 PF01476 LysM domain A1D48_RS05200 PF00140 Sigma-70 factor, region 1.2 A1D48_RS05200 PF04542 Sigma-70 region 2 A1D48_RS05200 PF04539 Sigma-70 region 3 A1D48_RS05200 PF04545 Sigma-70, region 4 A1D48_RS05210 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A1D48_RS05215 PF02441 Flavoprotein A1D48_RS05220 PF01047 MarR family A1D48_RS05225 PF00455 DeoR C terminal sensor domain A1D48_RS05225 PF08220 DeoR-like helix-turn-helix domain A1D48_RS05230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A1D48_RS05230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A1D48_RS05235 PF07005 Sugar-binding N-terminal domain A1D48_RS05235 PF17042 Nucleotide-binding C-terminal domain A1D48_RS05240 PF00596 Class II Aldolase and Adducin N-terminal domain A1D48_RS05245 PF01261 Xylose isomerase-like TIM barrel A1D48_RS05250 PF01370 NAD dependent epimerase/dehydratase family A1D48_RS05255 PF02447 GntP family permease A1D48_RS05260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS05260 PF03466 LysR substrate binding domain A1D48_RS05265 PF07690 Major Facilitator Superfamily A1D48_RS05275 PF00488 MutS domain V A1D48_RS05275 PF01624 MutS domain I A1D48_RS05275 PF05188 MutS domain II A1D48_RS05275 PF05192 MutS domain III A1D48_RS05275 PF05190 MutS family domain IV A1D48_RS05300 PF00149 Calcineurin-like phosphoesterase A1D48_RS05335 PF04741 InvH outer membrane lipoprotein A1D48_RS05340 PF12833 Helix-turn-helix domain A1D48_RS05345 PF00263 Bacterial type II and III secretion system protein A1D48_RS05345 PF03958 Bacterial type II/III secretion system short domain A1D48_RS05350 PF07201 HrpJ-like domain A1D48_RS05355 PF00771 FHIPEP family A1D48_RS05360 PF03519 Invasion protein B family A1D48_RS05365 PF18269 T3SS EscN ATPase C-terminal domain A1D48_RS05365 PF02874 ATP synthase alpha/beta family, beta-barrel domain A1D48_RS05365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A1D48_RS05370 PF02090 Salmonella surface presentation of antigen gene type M protein A1D48_RS05375 PF02510 Surface presentation of antigens protein A1D48_RS05380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A1D48_RS05385 PF00813 FliP family A1D48_RS05390 PF01313 Bacterial export proteins, family 3 A1D48_RS05395 PF01311 Bacterial export proteins, family 1 A1D48_RS05400 PF01312 FlhB HrpN YscU SpaS Family A1D48_RS05405 PF07720 Tetratricopeptide repeat A1D48_RS05410 PF16535 Type III cell invasion protein SipB A1D48_RS05410 PF04888 Secretion system effector C (SseC) like family A1D48_RS05415 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) A1D48_RS05420 PF06511 Type III secretion systems tip complex components A1D48_RS05425 PF09052 SipA N-terminal domain A1D48_RS05430 PF00550 Phosphopantetheine attachment site A1D48_RS05440 PF05932 Tir chaperone protein (CesT) family A1D48_RS05445 PF09119 SicP binding A1D48_RS05445 PF03545 Yersinia virulence determinant (YopE) A1D48_RS05445 PF00102 Protein-tyrosine phosphatase A1D48_RS05450 PF01464 Transglycosylase SLT domain A1D48_RS05455 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS05460 PF12833 Helix-turn-helix domain A1D48_RS05465 PF09480 Type III secretion system protein PrgH-EprH (PrgH) A1D48_RS05470 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF A1D48_RS05480 PF01514 Secretory protein of YscJ/FliF family A1D48_RS05485 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) A1D48_RS05500 PF12833 Helix-turn-helix domain A1D48_RS05510 PF03421 YopJ Serine/Threonine acetyltransferase A1D48_RS05515 PF00950 ABC 3 transport family A1D48_RS05520 PF00950 ABC 3 transport family A1D48_RS05525 PF00005 ABC transporter A1D48_RS05530 PF01297 Zinc-uptake complex component A periplasmic A1D48_RS05535 PF11756 Nitrous oxide-stimulated promoter A1D48_RS05540 PF01590 GAF domain A1D48_RS05540 PF00158 Sigma-54 interaction domain A1D48_RS05540 PF02954 Bacterial regulatory protein, Fis family A1D48_RS05545 PF00586 AIR synthase related protein, N-terminal domain A1D48_RS05545 PF02769 AIR synthase related protein, C-terminal domain A1D48_RS05550 PF01924 Hydrogenase formation hypA family A1D48_RS05555 PF01455 HupF/HypC family A1D48_RS05560 PF02492 CobW/HypB/UreG, nucleotide-binding domain A1D48_RS05565 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA A1D48_RS05575 PF11046 Transcriptional repressor of hyc and hyp operons A1D48_RS05580 PF13247 4Fe-4S dicluster domain A1D48_RS05585 PF00361 Proton-conducting membrane transporter A1D48_RS05590 PF00146 NADH dehydrogenase A1D48_RS05595 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A1D48_RS05595 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A1D48_RS05595 PF00374 Nickel-dependent hydrogenase A1D48_RS05600 PF12838 4Fe-4S dicluster domain A1D48_RS05605 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A1D48_RS05610 PF07450 Formate hydrogenlyase maturation protein HycH A1D48_RS05615 PF01750 Hydrogenase maturation protease A1D48_RS05625 PF13247 4Fe-4S dicluster domain A1D48_RS05625 PF12800 4Fe-4S binding domain A1D48_RS05630 PF17788 HypF Kae1-like domain A1D48_RS05630 PF00708 Acylphosphatase A1D48_RS05630 PF07503 HypF finger A1D48_RS05630 PF01300 Telomere recombination A1D48_RS05635 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS05635 PF18113 Rubredoxin binding C-terminal domain A1D48_RS05640 PF00258 Flavodoxin A1D48_RS05640 PF00753 Metallo-beta-lactamase superfamily A1D48_RS05640 PF00301 Rubredoxin A1D48_RS05645 PF01590 GAF domain A1D48_RS05645 PF00158 Sigma-54 interaction domain A1D48_RS05650 PF00571 CBS domain A1D48_RS05650 PF01380 SIS domain A1D48_RS05655 PF00455 DeoR C terminal sensor domain A1D48_RS05655 PF08220 DeoR-like helix-turn-helix domain A1D48_RS05660 PF06923 Glucitol operon activator protein (GutM) A1D48_RS05665 PF00106 short chain dehydrogenase A1D48_RS05670 PF03829 PTS system glucitol/sorbitol-specific IIA component A1D48_RS05675 PF07663 Sorbitol phosphotransferase enzyme II C-terminus A1D48_RS05675 PF03612 Sorbitol phosphotransferase enzyme II N-terminus A1D48_RS05680 PF03608 PTS system enzyme II sorbitol-specific factor A1D48_RS05685 PF13406 Transglycosylase SLT domain A1D48_RS05695 PF02464 Competence-damaged protein A1D48_RS05700 PF00154 recA bacterial DNA recombination protein A1D48_RS05705 PF02631 RecX family A1D48_RS05715 PF02272 DHHA1 domain A1D48_RS05715 PF01411 tRNA synthetases class II (A) A1D48_RS05715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A1D48_RS05720 PF02599 Global regulator protein family A1D48_RS05755 PF13419 Haloacid dehalogenase-like hydrolase A1D48_RS05760 PF09335 SNARE associated Golgi protein A1D48_RS05765 PF04262 Glutamate-cysteine ligase A1D48_RS05770 PF02664 S-Ribosylhomocysteinase (LuxS) A1D48_RS05780 PF07690 Major Facilitator Superfamily A1D48_RS05785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A1D48_RS05785 PF00529 HlyD membrane-fusion protein of T1SS A1D48_RS05790 PF01047 MarR family A1D48_RS05795 PF07690 Major Facilitator Superfamily A1D48_RS05800 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A1D48_RS05805 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS05810 PF00005 ABC transporter A1D48_RS05810 PF00571 CBS domain A1D48_RS05820 PF00268 Ribonucleotide reductase, small chain A1D48_RS05825 PF02867 Ribonucleotide reductase, barrel domain A1D48_RS05825 PF00317 Ribonucleotide reductase, all-alpha domain A1D48_RS05825 PF08343 Ribonucleotide reductase N-terminal A1D48_RS05830 PF07972 NrdI Flavodoxin like A1D48_RS05835 PF00462 Glutaredoxin A1D48_RS05845 PF02627 Carboxymuconolactone decarboxylase family A1D48_RS05850 PF00155 Aminotransferase class I and II A1D48_RS05850 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS05855 PF05957 Bacterial protein of unknown function (DUF883) A1D48_RS05860 PF09400 Protein of unknown function (DUF2002) A1D48_RS05865 PF06610 L-alanine exporter A1D48_RS05875 PF00816 H-NS histone family A1D48_RS05885 PF00581 Rhodanese-like domain A1D48_RS05885 PF11127 Protein of unknown function (DUF2892) A1D48_RS05890 PF01022 Bacterial regulatory protein, arsR family A1D48_RS05895 PF01679 Proteolipid membrane potential modulator A1D48_RS05905 PF01476 LysM domain A1D48_RS05905 PF04972 BON domain A1D48_RS05910 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS05910 PF07729 FCD domain A1D48_RS05915 PF00324 Amino acid permease A1D48_RS05920 PF00202 Aminotransferase class-III A1D48_RS05925 PF00171 Aldehyde dehydrogenase family A1D48_RS05930 PF01266 FAD dependent oxidoreductase A1D48_RS05935 PF08943 CsiD A1D48_RS05940 PF01970 Tripartite tricarboxylate transporter TctA family A1D48_RS05955 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS05955 PF00072 Response regulator receiver domain A1D48_RS05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS05960 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS05965 PF03824 High-affinity nickel-transport protein A1D48_RS05980 PF04393 Protein of unknown function (DUF535) A1D48_RS05985 PF00805 Pentapeptide repeats (8 copies) A1D48_RS05995 PF00593 TonB dependent receptor A1D48_RS05995 PF07715 TonB-dependent Receptor Plug Domain A1D48_RS06000 PF00756 Putative esterase A1D48_RS06010 PF00664 ABC transporter transmembrane region A1D48_RS06010 PF00005 ABC transporter A1D48_RS06015 PF06722 Protein of unknown function (DUF1205) A1D48_RS06065 PF00529 HlyD membrane-fusion protein of T1SS A1D48_RS06065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A1D48_RS06070 PF00664 ABC transporter transmembrane region A1D48_RS06070 PF00005 ABC transporter A1D48_RS06085 PF01668 SmpB protein A1D48_RS06090 PF03364 Polyketide cyclase / dehydrase and lipid transport A1D48_RS06095 PF03658 RnfH family Ubiquitin A1D48_RS06100 PF04355 SmpA / OmlA family A1D48_RS06105 PF02463 RecF/RecN/SMC N terminal domain A1D48_RS06110 PF01513 ATP-NAD kinase A1D48_RS06120 PF01025 GrpE A1D48_RS06130 PF01595 Cyclin M transmembrane N-terminal domain A1D48_RS06130 PF03471 Transporter associated domain A1D48_RS06130 PF00571 CBS domain A1D48_RS06135 PF01578 Cytochrome C assembly protein A1D48_RS06145 PF00448 SRP54-type protein, GTPase domain A1D48_RS06145 PF02881 SRP54-type protein, helical bundle domain A1D48_RS06145 PF02978 Signal peptide binding domain A1D48_RS06150 PF00886 Ribosomal protein S16 A1D48_RS06155 PF01782 RimM N-terminal domain A1D48_RS06155 PF05239 PRC-barrel domain A1D48_RS06160 PF01746 tRNA (Guanine-1)-methyltransferase A1D48_RS06165 PF01245 Ribosomal protein L19 A1D48_RS06170 PF17152 Periplasmic sensor domain A1D48_RS06170 PF00990 Diguanylate cyclase, GGDEF domain A1D48_RS06175 PF13689 YfiR/HmsC-like A1D48_RS06180 PF00793 DAHP synthetase I family A1D48_RS06185 PF01817 Chorismate mutase type II A1D48_RS06185 PF02153 Prephenate dehydrogenase A1D48_RS06190 PF08450 SMP-30/Gluconolactonase/LRE-like region A1D48_RS06195 PF01817 Chorismate mutase type II A1D48_RS06195 PF00800 Prephenate dehydratase A1D48_RS06205 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A1D48_RS06210 PF13525 Outer membrane lipoprotein A1D48_RS06215 PF01479 S4 domain A1D48_RS06215 PF00849 RNA pseudouridylate synthase A1D48_RS06220 PF02578 Multi-copper polyphenol oxidoreductase laccase A1D48_RS06225 PF10431 C-terminal, D2-small domain, of ClpB protein A1D48_RS06225 PF02861 Clp amino terminal domain, pathogenicity island component A1D48_RS06225 PF00004 ATPase family associated with various cellular activities (AAA) A1D48_RS06225 PF07724 AAA domain (Cdc48 subfamily) A1D48_RS06225 PF17871 AAA lid domain A1D48_RS06260 PF00083 Sugar (and other) transporter A1D48_RS06265 PF10043 Predicted periplasmic lipoprotein (DUF2279) A1D48_RS06270 PF13091 PLD-like domain A1D48_RS06275 PF00583 Acetyltransferase (GNAT) family A1D48_RS06275 PF13380 CoA binding domain A1D48_RS06275 PF13607 Succinyl-CoA ligase like flavodoxin domain A1D48_RS06280 PF03942 DTW domain A1D48_RS06285 PF00085 Thioredoxin A1D48_RS06290 PF08032 RNA 2'-O ribose methyltransferase substrate binding A1D48_RS06290 PF00588 SpoU rRNA Methylase family A1D48_RS06295 PF03167 Uracil DNA glycosylase superfamily A1D48_RS06300 PF01228 Glycine radical A1D48_RS06305 PF01810 LysE type translocator A1D48_RS06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS06310 PF03466 LysR substrate binding domain A1D48_RS06315 PF00270 DEAD/DEAH box helicase A1D48_RS06315 PF00271 Helicase conserved C-terminal domain A1D48_RS06320 PF05175 Methyltransferase small domain A1D48_RS06325 PF00890 FAD binding domain A1D48_RS06325 PF02910 Fumarate reductase flavoprotein C-term A1D48_RS06335 PF08281 Sigma-70, region 4 A1D48_RS06335 PF04542 Sigma-70 region 2 A1D48_RS06340 PF03873 Anti sigma-E protein RseA, C-terminal domain A1D48_RS06340 PF03872 Anti sigma-E protein RseA, N-terminal domain A1D48_RS06345 PF17188 MucB/RseB C-terminal domain A1D48_RS06345 PF03888 MucB/RseB N-terminal domain A1D48_RS06360 PF00679 Elongation factor G C-terminus A1D48_RS06360 PF00009 Elongation factor Tu GTP binding domain A1D48_RS06360 PF03144 Elongation factor Tu domain 2 A1D48_RS06360 PF06421 GTP-binding protein LepA C-terminus A1D48_RS06365 PF10502 Signal peptidase, peptidase S26 A1D48_RS06375 PF00035 Double-stranded RNA binding motif A1D48_RS06375 PF14622 Ribonuclease-III-like A1D48_RS06380 PF07650 KH domain A1D48_RS06380 PF01926 50S ribosome-binding GTPase A1D48_RS06385 PF11967 Recombination protein O N terminal A1D48_RS06385 PF02565 Recombination protein O C terminal A1D48_RS06390 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A1D48_RS06395 PF01648 4'-phosphopantetheinyl transferase superfamily A1D48_RS06400 PF12838 4Fe-4S dicluster domain A1D48_RS06405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS06405 PF03466 LysR substrate binding domain A1D48_RS06410 PF07690 Major Facilitator Superfamily A1D48_RS06415 PF02558 Ketopantoate reductase PanE/ApbA A1D48_RS06415 PF08546 Ketopantoate reductase PanE/ApbA C terminal A1D48_RS06420 PF01418 Helix-turn-helix domain, rpiR family A1D48_RS06420 PF01380 SIS domain A1D48_RS06425 PF01380 SIS domain A1D48_RS06430 PF02378 Phosphotransferase system, EIIC A1D48_RS06430 PF00367 phosphotransferase system, EIIB A1D48_RS06440 PF14437 MafB19-like deaminase A1D48_RS06445 PF00497 Bacterial extracellular solute-binding proteins, family 3 A1D48_RS06445 PF01464 Transglycosylase SLT domain A1D48_RS06455 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal A1D48_RS06455 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A1D48_RS06455 PF02769 AIR synthase related protein, C-terminal domain A1D48_RS06460 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS06465 PF13942 YfhG lipoprotein A1D48_RS06470 PF00072 Response regulator receiver domain A1D48_RS06470 PF00158 Sigma-54 interaction domain A1D48_RS06475 PF00543 Nitrogen regulatory protein P-II A1D48_RS06480 PF00854 POT family A1D48_RS06485 PF01276 Orn/Lys/Arg decarboxylase, major domain A1D48_RS06485 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A1D48_RS06485 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A1D48_RS06490 PF13520 Amino acid permease A1D48_RS06495 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS06495 PF18500 CadC C-terminal domain 1 A1D48_RS06500 PF00042 Globin A1D48_RS06500 PF00175 Oxidoreductase NAD-binding domain A1D48_RS06500 PF00970 Oxidoreductase FAD-binding domain A1D48_RS06505 PF00464 Serine hydroxymethyltransferase A1D48_RS06510 PF12832 MFS_1 like family A1D48_RS06515 PF00874 PRD domain A1D48_RS06525 PF03824 High-affinity nickel-transport protein A1D48_RS06530 PF13187 4Fe-4S dicluster domain A1D48_RS06530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A1D48_RS06530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A1D48_RS06535 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B A1D48_RS06535 PF00175 Oxidoreductase NAD-binding domain A1D48_RS06540 PF17179 4Fe-4S dicluster domain A1D48_RS06545 PF12146 Serine aminopeptidase, S33 A1D48_RS06550 PF00459 Inositol monophosphatase family A1D48_RS06555 PF00588 SpoU rRNA Methylase family A1D48_RS06560 PF02082 Transcriptional regulator A1D48_RS06565 PF00266 Aminotransferase class-V A1D48_RS06570 PF01592 NifU-like N terminal domain A1D48_RS06575 PF01521 Iron-sulphur cluster biosynthesis A1D48_RS06580 PF07743 HSCB C-terminal oligomerisation domain A1D48_RS06585 PF00012 Hsp70 protein A1D48_RS06590 PF00111 2Fe-2S iron-sulfur cluster binding domain A1D48_RS06595 PF04384 Iron-sulphur cluster assembly A1D48_RS06600 PF00883 Cytosol aminopeptidase family, catalytic domain A1D48_RS06600 PF12404 Peptidase A1D48_RS06610 PF07179 SseB protein N-terminal domain A1D48_RS06610 PF14581 SseB protein C-terminal domain A1D48_RS06630 PF00581 Rhodanese-like domain A1D48_RS06635 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain A1D48_RS06635 PF11974 Bacterial alpha-2-macroglobulin MG3 domain A1D48_RS06635 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain A1D48_RS06635 PF17962 Bacterial macroglobulin domain 6 A1D48_RS06635 PF07703 Alpha-2-macroglobulin bait region domain A1D48_RS06635 PF00207 Alpha-2-macroglobulin family A1D48_RS06635 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain A1D48_RS06635 PF01835 MG2 domain A1D48_RS06635 PF07678 A-macroglobulin TED domain A1D48_RS06640 PF06832 Penicillin-Binding Protein C-terminus Family A1D48_RS06640 PF00912 Transglycosylase A1D48_RS06640 PF00905 Penicillin binding protein transpeptidase domain A1D48_RS06645 PF00384 Molybdopterin oxidoreductase A1D48_RS06645 PF01568 Molydopterin dinucleotide binding domain A1D48_RS06645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS06650 PF13247 4Fe-4S dicluster domain A1D48_RS06650 PF12800 4Fe-4S binding domain A1D48_RS06665 PF00334 Nucleoside diphosphate kinase A1D48_RS06670 PF04055 Radical SAM superfamily A1D48_RS06680 PF13464 Domain of unknown function (DUF4115) A1D48_RS06685 PF04551 GcpE protein A1D48_RS06690 PF03129 Anticodon binding domain A1D48_RS06690 PF13393 Histidyl-tRNA synthetase A1D48_RS06695 PF09976 Tetratricopeptide repeat-like domain A1D48_RS06700 PF13360 PQQ-like domain A1D48_RS06705 PF01926 50S ribosome-binding GTPase A1D48_RS06705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A1D48_RS06710 PF07191 zinc-ribbons A1D48_RS06715 PF02369 Bacterial Ig-like domain (group 1) A1D48_RS06715 PF11924 Inverse autotransporter, beta-domain A1D48_RS06715 PF07979 Intimin C-type lectin domain A1D48_RS06715 PF02368 Bacterial Ig-like domain (group 2) A1D48_RS06715 PF01476 LysM domain A1D48_RS06735 PF03797 Autotransporter beta-domain A1D48_RS06740 PF13742 OB-fold nucleic acid binding domain A1D48_RS06740 PF02601 Exonuclease VII, large subunit A1D48_RS06745 PF00571 CBS domain A1D48_RS06745 PF00478 IMP dehydrogenase / GMP reductase domain A1D48_RS06750 PF02540 NAD synthase A1D48_RS06750 PF00117 Glutamine amidotransferase class-I A1D48_RS06750 PF00958 GMP synthase C terminal domain A1D48_RS06765 PF01548 Transposase A1D48_RS06765 PF02371 Transposase IS116/IS110/IS902 family A1D48_RS06825 PF17358 Family of unknown function (DUF5384) A1D48_RS06830 PF05433 Glycine zipper 2TM domain A1D48_RS06835 PF11119 Protein of unknown function (DUF2633) A1D48_RS06845 PF00563 EAL domain A1D48_RS06845 PF05231 MASE1 A1D48_RS06850 PF02541 Ppx/GppA phosphatase family A1D48_RS06855 PF02503 Polyphosphate kinase middle domain A1D48_RS06855 PF13090 Polyphosphate kinase C-terminal domain 2 A1D48_RS06855 PF17941 Polyphosphate kinase C-terminal domain 1 A1D48_RS06855 PF13089 Polyphosphate kinase N-terminal domain A1D48_RS06860 PF00551 Formyl transferase A1D48_RS06865 PF00586 AIR synthase related protein, N-terminal domain A1D48_RS06865 PF02769 AIR synthase related protein, C-terminal domain A1D48_RS06875 PF00860 Permease family A1D48_RS06880 PF00308 Bacterial dnaA protein A1D48_RS06885 PF03960 ArsC family A1D48_RS06890 PF01435 Peptidase family M48 A1D48_RS06895 PF01594 AI-2E family transporter A1D48_RS06900 PF13556 PucR C-terminal helix-turn-helix domain A1D48_RS06900 PF17853 GGDEF-like domain A1D48_RS06900 PF05651 Putative sugar diacid recognition A1D48_RS06905 PF02447 GntP family permease A1D48_RS06910 PF02595 Glycerate kinase family A1D48_RS06915 PF00578 AhpC/TSA family A1D48_RS06920 PF01842 ACT domain A1D48_RS06925 PF00701 Dihydrodipicolinate synthetase family A1D48_RS06930 PF06804 NlpB/DapX lipoprotein A1D48_RS06935 PF01259 SAICAR synthetase A1D48_RS06940 PF04228 Putative neutral zinc metallopeptidase A1D48_RS06945 PF13718 GNAT acetyltransferase 2 A1D48_RS06945 PF08351 Domain of unknown function (DUF1726) A1D48_RS06945 PF17176 tRNA-binding domain A1D48_RS06945 PF05127 Helicase A1D48_RS06950 PF13980 Uncharacterised protein family (UPF0370) A1D48_RS06955 PF01546 Peptidase family M20/M25/M40 A1D48_RS06955 PF07687 Peptidase dimerisation domain A1D48_RS06960 PF03960 ArsC family A1D48_RS06970 PF00873 AcrB/AcrD/AcrF family A1D48_RS06975 PF00672 HAMP domain A1D48_RS06975 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term A1D48_RS06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS06975 PF07730 Histidine kinase A1D48_RS06985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A1D48_RS06985 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS06985 PF13247 4Fe-4S dicluster domain A1D48_RS06995 PF00144 Beta-lactamase A1D48_RS07000 PF00293 NUDIX domain A1D48_RS07005 PF06674 Protein of unknown function (DUF1176) A1D48_RS07015 PF02779 Transketolase, pyrimidine binding domain A1D48_RS07015 PF02780 Transketolase, C-terminal domain A1D48_RS07015 PF00456 Transketolase, thiamine diphosphate binding domain A1D48_RS07020 PF00923 Transaldolase/Fructose-6-phosphate aldolase A1D48_RS07030 PF01515 Phosphate acetyl/butaryl transferase A1D48_RS07030 PF03949 Malic enzyme, NAD binding domain A1D48_RS07030 PF00390 Malic enzyme, N-terminal domain A1D48_RS07035 PF00936 BMC domain A1D48_RS07040 PF10662 Ethanolamine utilisation - propanediol utilisation A1D48_RS07045 PF06249 Ethanolamine utilisation protein EutQ A1D48_RS07050 PF01923 Cobalamin adenosyltransferase A1D48_RS07055 PF01515 Phosphate acetyl/butaryl transferase A1D48_RS07060 PF00936 BMC domain A1D48_RS07065 PF03319 Ethanolamine utilisation protein EutN/carboxysome A1D48_RS07070 PF00171 Aldehyde dehydrogenase family A1D48_RS07080 PF00465 Iron-containing alcohol dehydrogenase A1D48_RS07085 PF04346 Ethanolamine utilisation protein, EutH A1D48_RS07090 PF06277 Ethanolamine utilisation protein EutA A1D48_RS07095 PF06751 Ethanolamine ammonia lyase large subunit (EutB) A1D48_RS07100 PF05985 Ethanolamine ammonia-lyase light chain (EutC) A1D48_RS07105 PF00936 BMC domain A1D48_RS07110 PF00936 BMC domain A1D48_RS07110 PF16365 Ethanolamine utilization protein EutK C-terminus A1D48_RS07115 PF12833 Helix-turn-helix domain A1D48_RS07120 PF09234 Domain of unknown function (DUF1963) A1D48_RS07130 PF01218 Coproporphyrinogen III oxidase A1D48_RS07135 PF01520 N-acetylmuramoyl-L-alanine amidase A1D48_RS07140 PF00583 Acetyltransferase (GNAT) family A1D48_RS07145 PF11143 Protein of unknown function (DUF2919) A1D48_RS07150 PF06572 Protein of unknown function (DUF1131) A1D48_RS07155 PF04261 Dyp-type peroxidase family A1D48_RS07170 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS07175 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS07180 PF00005 ABC transporter A1D48_RS07185 PF00291 Pyridoxal-phosphate dependent enzyme A1D48_RS07205 PF17263 Family of unknown function (DUF5329) A1D48_RS07210 PF00117 Glutamine amidotransferase class-I A1D48_RS07215 PF00155 Aminotransferase class I and II A1D48_RS07215 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS07220 PF08543 Phosphomethylpyrimidine kinase A1D48_RS07230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A1D48_RS07235 PF02896 PEP-utilising enzyme, TIM barrel domain A1D48_RS07235 PF05524 PEP-utilising enzyme, N-terminal A1D48_RS07235 PF00391 PEP-utilising enzyme, mobile domain A1D48_RS07240 PF00381 PTS HPr component phosphorylation site A1D48_RS07245 PF00291 Pyridoxal-phosphate dependent enzyme A1D48_RS07255 PF04354 ZipA, C-terminal FtsZ-binding domain A1D48_RS07260 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A1D48_RS07260 PF03120 NAD-dependent DNA ligase OB-fold domain A1D48_RS07260 PF01653 NAD-dependent DNA ligase adenylation domain A1D48_RS07260 PF00533 BRCA1 C Terminus (BRCT) domain A1D48_RS07260 PF12826 Helix-hairpin-helix motif A1D48_RS07265 PF12843 Putative quorum-sensing-regulated virulence factor A1D48_RS07270 PF13593 SBF-like CPA transporter family (DUF4137) A1D48_RS07275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS07275 PF03466 LysR substrate binding domain A1D48_RS07280 PF03502 Nucleoside-specific channel-forming protein, Tsx A1D48_RS07285 PF01048 Phosphorylase superfamily A1D48_RS07290 PF03825 Nucleoside H+ symporter A1D48_RS07300 PF03466 LysR substrate binding domain A1D48_RS07300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS07325 PF00749 tRNA synthetases class I (E and Q), catalytic domain A1D48_RS07330 PF07037 Putative transcription regulator (DUF1323) A1D48_RS07335 PF07037 Putative transcription regulator (DUF1323) A1D48_RS07355 PF00563 EAL domain A1D48_RS07355 PF05231 MASE1 A1D48_RS07360 PF07670 Nucleoside recognition A1D48_RS07360 PF07662 Na+ dependent nucleoside transporter C-terminus A1D48_RS07360 PF01773 Na+ dependent nucleoside transporter N-terminus A1D48_RS07365 PF01566 Natural resistance-associated macrophage protein A1D48_RS07370 PF10697 Protein of unknown function (DUF2502) A1D48_RS07375 PF00248 Aldo/keto reductase family A1D48_RS07385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A1D48_RS07385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A1D48_RS07385 PF00205 Thiamine pyrophosphate enzyme, central domain A1D48_RS07390 PF00654 Voltage gated chloride channel A1D48_RS07395 PF02685 Glucokinase A1D48_RS07400 PF00155 Aminotransferase class I and II A1D48_RS07410 PF03279 Bacterial lipid A biosynthesis acyltransferase A1D48_RS07415 PF10810 Protein of unknown function (DUF2545) A1D48_RS07425 PF07690 Major Facilitator Superfamily A1D48_RS07440 PF00672 HAMP domain A1D48_RS07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS07440 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS07445 PF02954 Bacterial regulatory protein, Fis family A1D48_RS07445 PF14532 Sigma-54 interaction domain A1D48_RS07445 PF00072 Response regulator receiver domain A1D48_RS07450 PF01278 Omptin family A1D48_RS07460 PF01226 Formate/nitrite transporter A1D48_RS07465 PF04333 MlaA lipoprotein A1D48_RS07470 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A1D48_RS07475 PF04175 Protein of unknown function (DUF406) A1D48_RS07480 PF02803 Thiolase, C-terminal domain A1D48_RS07480 PF00108 Thiolase, N-terminal domain A1D48_RS07485 PF00378 Enoyl-CoA hydratase/isomerase A1D48_RS07485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A1D48_RS07485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A1D48_RS07490 PF00300 Histidine phosphatase superfamily (branch 1) A1D48_RS07495 PF01713 Smr domain A1D48_RS07500 PF05175 Methyltransferase small domain A1D48_RS07505 PF01264 Chorismate synthase A1D48_RS07510 PF03411 Penicillin-insensitive murein endopeptidase A1D48_RS07515 PF01925 Sulfite exporter TauE/SafE A1D48_RS07520 PF04315 Elongation factor P hydroxylase A1D48_RS07525 PF08891 YfcL protein A1D48_RS07530 PF01266 FAD dependent oxidoreductase A1D48_RS07530 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A1D48_RS07535 PF00109 Beta-ketoacyl synthase, N-terminal domain A1D48_RS07535 PF02801 Beta-ketoacyl synthase, C-terminal domain A1D48_RS07540 PF02517 CPBP intramembrane metalloprotease A1D48_RS07565 PF07690 Major Facilitator Superfamily A1D48_RS07575 PF11890 Domain of unknown function (DUF3410) A1D48_RS07575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A1D48_RS07575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A1D48_RS07580 PF01118 Semialdehyde dehydrogenase, NAD binding domain A1D48_RS07580 PF02774 Semialdehyde dehydrogenase, dimerisation domain A1D48_RS07585 PF01416 tRNA pseudouridine synthase A1D48_RS07590 PF09335 SNARE associated Golgi protein A1D48_RS07595 PF01039 Carboxyl transferase domain A1D48_RS07595 PF17848 Acetyl-coA carboxylase zinc finger domain A1D48_RS07600 PF02875 Mur ligase family, glutamate ligase domain A1D48_RS07600 PF08245 Mur ligase middle domain A1D48_RS07605 PF05036 Sporulation related domain A1D48_RS07610 PF02674 Colicin V production protein A1D48_RS07615 PF00156 Phosphoribosyl transferase domain A1D48_RS07620 PF13426 PAS domain A1D48_RS07620 PF02954 Bacterial regulatory protein, Fis family A1D48_RS07620 PF00158 Sigma-54 interaction domain A1D48_RS07625 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A1D48_RS07625 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A1D48_RS07630 PF13520 Amino acid permease A1D48_RS07635 PF01168 Alanine racemase, N-terminal domain A1D48_RS07640 PF00324 Amino acid permease A1D48_RS07645 PF02441 Flavoprotein A1D48_RS07655 PF00497 Bacterial extracellular solute-binding proteins, family 3 A1D48_RS07660 PF00497 Bacterial extracellular solute-binding proteins, family 3 A1D48_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS07675 PF00005 ABC transporter A1D48_RS07680 PF08338 Domain of unknown function (DUF1731) A1D48_RS07680 PF01370 NAD dependent epimerase/dehydratase family A1D48_RS07685 PF02798 Glutathione S-transferase, N-terminal domain A1D48_RS07685 PF00043 Glutathione S-transferase, C-terminal domain A1D48_RS07690 PF14834 Glutathione S-transferase, C-terminal domain A1D48_RS07690 PF02798 Glutathione S-transferase, N-terminal domain A1D48_RS07695 PF12850 Calcineurin-like phosphoesterase superfamily domain A1D48_RS07700 PF00293 NUDIX domain A1D48_RS07705 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS07715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A1D48_RS07725 PF03611 PTS system sugar-specific permease component A1D48_RS07730 PF00456 Transketolase, thiamine diphosphate binding domain A1D48_RS07735 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A1D48_RS07735 PF02780 Transketolase, C-terminal domain A1D48_RS07735 PF02779 Transketolase, pyrimidine binding domain A1D48_RS07740 PF03606 C4-dicarboxylate anaerobic carrier A1D48_RS07745 PF01515 Phosphate acetyl/butaryl transferase A1D48_RS07745 PF07085 DRTGG domain A1D48_RS07750 PF00871 Acetokinase family A1D48_RS07755 PF04217 Protein of unknown function, DUF412 A1D48_RS07760 PF03887 YfbU domain A1D48_RS07765 PF13419 Haloacid dehalogenase-like hydrolase A1D48_RS07770 PF03600 Citrate transporter A1D48_RS07770 PF02080 TrkA-C domain A1D48_RS07785 PF00155 Aminotransferase class I and II A1D48_RS07795 PF03466 LysR substrate binding domain A1D48_RS07795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS07805 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A1D48_RS07810 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A1D48_RS07815 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A1D48_RS07815 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A1D48_RS07825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A1D48_RS07825 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A1D48_RS07825 PF10531 SLBB domain A1D48_RS07830 PF00384 Molybdopterin oxidoreductase A1D48_RS07830 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A1D48_RS07830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS07830 PF01568 Molydopterin dinucleotide binding domain A1D48_RS07835 PF00146 NADH dehydrogenase A1D48_RS07840 PF12838 4Fe-4S dicluster domain A1D48_RS07845 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 A1D48_RS07850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A1D48_RS07855 PF00361 Proton-conducting membrane transporter A1D48_RS07855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A1D48_RS07860 PF00361 Proton-conducting membrane transporter A1D48_RS07865 PF00361 Proton-conducting membrane transporter A1D48_RS07870 PF03797 Autotransporter beta-domain A1D48_RS07875 PF12034 Domain of unknown function (DUF3520) A1D48_RS07875 PF00092 von Willebrand factor type A domain A1D48_RS07875 PF12450 von Willebrand factor A1D48_RS07880 PF01584 CheW-like domain A1D48_RS07880 PF00072 Response regulator receiver domain A1D48_RS07885 PF12706 Beta-lactamase superfamily domain A1D48_RS07890 PF13673 Acetyltransferase (GNAT) domain A1D48_RS07895 PF05957 Bacterial protein of unknown function (DUF883) A1D48_RS07900 PF00425 chorismate binding enzyme A1D48_RS07905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A1D48_RS07905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A1D48_RS07905 PF16582 Middle domain of thiamine pyrophosphate A1D48_RS07910 PF12697 Alpha/beta hydrolase family A1D48_RS07915 PF00378 Enoyl-CoA hydratase/isomerase A1D48_RS07920 PF13378 Enolase C-terminal domain-like A1D48_RS07925 PF00501 AMP-binding enzyme A1D48_RS07925 PF13193 AMP-binding enzyme C-terminal domain A1D48_RS07940 PF00892 EamA-like transporter family A1D48_RS07945 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase A1D48_RS07950 PF01522 Polysaccharide deacetylase A1D48_RS07955 PF01370 NAD dependent epimerase/dehydratase family A1D48_RS07955 PF02911 Formyl transferase, C-terminal domain A1D48_RS07955 PF00551 Formyl transferase A1D48_RS07960 PF00535 Glycosyl transferase family 2 A1D48_RS07965 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A1D48_RS07970 PF00300 Histidine phosphatase superfamily (branch 1) A1D48_RS07975 PF00293 NUDIX domain A1D48_RS07980 PF07437 YfaZ precursor A1D48_RS07985 PF00994 Probable molybdopterin binding domain A1D48_RS07990 PF01614 Bacterial transcriptional regulator A1D48_RS07990 PF09339 IclR helix-turn-helix domain A1D48_RS07995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A1D48_RS07995 PF13378 Enolase C-terminal domain-like A1D48_RS08000 PF07690 Major Facilitator Superfamily A1D48_RS08005 PF03328 HpcH/HpaI aldolase/citrate lyase family A1D48_RS08010 PF00994 Probable molybdopterin binding domain A1D48_RS08025 PF02754 Cysteine-rich domain A1D48_RS08025 PF13183 4Fe-4S dicluster domain A1D48_RS08030 PF00890 FAD binding domain A1D48_RS08035 PF04324 BFD-like [2Fe-2S] binding domain A1D48_RS08035 PF01266 FAD dependent oxidoreductase A1D48_RS08040 PF07690 Major Facilitator Superfamily A1D48_RS08045 PF03009 Glycerophosphoryl diester phosphodiesterase family A1D48_RS08050 PF03466 LysR substrate binding domain A1D48_RS08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS08055 PF07690 Major Facilitator Superfamily A1D48_RS08060 PF00111 2Fe-2S iron-sulfur cluster binding domain A1D48_RS08065 PF00268 Ribonucleotide reductase, small chain A1D48_RS08070 PF00317 Ribonucleotide reductase, all-alpha domain A1D48_RS08070 PF02867 Ribonucleotide reductase, barrel domain A1D48_RS08070 PF03477 ATP cone domain A1D48_RS08085 PF07690 Major Facilitator Superfamily A1D48_RS08090 PF13378 Enolase C-terminal domain-like A1D48_RS08090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A1D48_RS08100 PF00521 DNA gyrase/topoisomerase IV, subunit A A1D48_RS08100 PF03989 DNA gyrase C-terminal domain, beta-propeller A1D48_RS08105 PF00072 Response regulator receiver domain A1D48_RS08105 PF09456 RcsC Alpha-Beta-Loop (ABL) A1D48_RS08105 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS08105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS08110 PF00072 Response regulator receiver domain A1D48_RS08110 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS08115 PF16359 RcsD-ABL domain A1D48_RS08115 PF01627 Hpt domain A1D48_RS08115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS08125 PF00267 Gram-negative porin A1D48_RS08130 PF02424 ApbE family A1D48_RS08135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A1D48_RS08135 PF02805 Metal binding domain of Ada A1D48_RS08135 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A1D48_RS08135 PF12833 Helix-turn-helix domain A1D48_RS08140 PF13532 2OG-Fe(II) oxygenase superfamily A1D48_RS08145 PF00005 ABC transporter A1D48_RS08150 PF03974 Ecotin A1D48_RS08155 PF13187 4Fe-4S dicluster domain A1D48_RS08155 PF12800 4Fe-4S binding domain A1D48_RS08155 PF00037 4Fe-4S binding domain A1D48_RS08160 PF03927 NapD protein A1D48_RS08165 PF01568 Molydopterin dinucleotide binding domain A1D48_RS08165 PF00384 Molybdopterin oxidoreductase A1D48_RS08165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS08170 PF12838 4Fe-4S dicluster domain A1D48_RS08170 PF12800 4Fe-4S binding domain A1D48_RS08175 PF13237 4Fe-4S dicluster domain A1D48_RS08175 PF12801 4Fe-4S binding domain A1D48_RS08185 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) A1D48_RS08190 PF03264 NapC/NirT cytochrome c family, N-terminal region A1D48_RS08195 PF00005 ABC transporter A1D48_RS08200 PF03379 CcmB protein A1D48_RS08205 PF01578 Cytochrome C assembly protein A1D48_RS08210 PF04995 Heme exporter protein D (CcmD) A1D48_RS08215 PF03100 CcmE A1D48_RS08220 PF01578 Cytochrome C assembly protein A1D48_RS08220 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A1D48_RS08225 PF08534 Redoxin A1D48_RS08230 PF03918 Cytochrome C biogenesis protein A1D48_RS08235 PF00072 Response regulator receiver domain A1D48_RS08235 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS08265 PF00884 Sulfatase A1D48_RS08265 PF11893 Domain of unknown function (DUF3413) A1D48_RS08270 PF07208 Protein of unknown function (DUF1414) A1D48_RS08275 PF04245 37-kD nucleoid-associated bacterial protein A1D48_RS08285 PF01386 Ribosomal L25p family A1D48_RS08290 PF04851 Type III restriction enzyme, res subunit A1D48_RS08290 PF00271 Helicase conserved C-terminal domain A1D48_RS08295 PF00849 RNA pseudouridylate synthase A1D48_RS08295 PF01479 S4 domain A1D48_RS08300 PF07690 Major Facilitator Superfamily A1D48_RS08310 PF13989 YejG-like protein A1D48_RS08315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A1D48_RS08315 PF00005 ABC transporter A1D48_RS08320 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS08320 PF12911 N-terminal TM domain of oligopeptide transport permease C A1D48_RS08325 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS08330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A1D48_RS08335 PF12792 CSS motif domain associated with EAL A1D48_RS08335 PF00563 EAL domain A1D48_RS08340 PF00877 NlpC/P60 family A1D48_RS08350 PF01569 PAP2 superfamily A1D48_RS08355 PF07683 Cobalamin synthesis protein cobW C-terminal domain A1D48_RS08355 PF02492 CobW/HypB/UreG, nucleotide-binding domain A1D48_RS08360 PF09285 Elongation factor P, C-terminal A1D48_RS08360 PF01132 Elongation factor P (EF-P) OB domain A1D48_RS08360 PF08207 Elongation factor P (EF-P) KOW-like domain A1D48_RS08365 PF03692 Putative zinc- or iron-chelating domain A1D48_RS08380 PF07690 Major Facilitator Superfamily A1D48_RS08385 PF00381 PTS HPr component phosphorylation site A1D48_RS08385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A1D48_RS08390 PF00294 pfkB family carbohydrate kinase A1D48_RS08395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A1D48_RS08395 PF02378 Phosphotransferase system, EIIC A1D48_RS08400 PF01261 Xylose isomerase-like TIM barrel A1D48_RS08405 PF03601 Conserved hypothetical protein 698 A1D48_RS08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS08410 PF03466 LysR substrate binding domain A1D48_RS08415 PF00324 Amino acid permease A1D48_RS08425 PF07715 TonB-dependent Receptor Plug Domain A1D48_RS08425 PF00593 TonB dependent receptor A1D48_RS08430 PF07690 Major Facilitator Superfamily A1D48_RS08435 PF18429 Domain of unknown function (DUF5609) A1D48_RS08440 PF03315 Serine dehydratase beta chain A1D48_RS08440 PF03313 Serine dehydratase alpha chain A1D48_RS08450 PF00756 Putative esterase A1D48_RS08460 PF01227 GTP cyclohydrolase I A1D48_RS08465 PF04235 Protein of unknown function (DUF418) A1D48_RS08470 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS08475 PF13407 Periplasmic binding protein domain A1D48_RS08480 PF00005 ABC transporter A1D48_RS08485 PF02653 Branched-chain amino acid transport system / permease component A1D48_RS08490 PF01180 Dihydroorotate dehydrogenase A1D48_RS08495 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS08495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A1D48_RS08500 PF10808 Protein of unknown function (DUF2542) A1D48_RS08505 PF02698 DUF218 domain A1D48_RS08510 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region A1D48_RS08510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A1D48_RS08515 PF04172 LrgB-like family A1D48_RS08520 PF03788 LrgA family A1D48_RS08525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS08525 PF03466 LysR substrate binding domain A1D48_RS08530 PF07690 Major Facilitator Superfamily A1D48_RS08535 PF07883 Cupin domain A1D48_RS08540 PF01557 Fumarylacetoacetate (FAA) hydrolase family A1D48_RS08545 PF14497 Glutathione S-transferase, C-terminal domain A1D48_RS08545 PF02798 Glutathione S-transferase, N-terminal domain A1D48_RS08550 PF01494 FAD binding domain A1D48_RS08555 PF01207 Dihydrouridine synthase (Dus) A1D48_RS08565 PF02321 Outer membrane efflux protein A1D48_RS08575 PF09335 SNARE associated Golgi protein A1D48_RS08580 PF04893 Yip1 domain A1D48_RS08590 PF00768 D-alanyl-D-alanine carboxypeptidase A1D48_RS08595 PF01565 FAD binding domain A1D48_RS08595 PF09330 D-lactate dehydrogenase, membrane binding A1D48_RS08600 PF14310 Fibronectin type III-like domain A1D48_RS08600 PF00933 Glycosyl hydrolase family 3 N terminal domain A1D48_RS08600 PF01915 Glycosyl hydrolase family 3 C-terminal domain A1D48_RS08605 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A1D48_RS08610 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS08615 PF00005 ABC transporter A1D48_RS08620 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS08630 PF13411 MerR HTH family regulatory protein A1D48_RS08635 PF06580 Histidine kinase A1D48_RS08635 PF07694 5TMR of 5TMR-LYT A1D48_RS08640 PF04397 LytTr DNA-binding domain A1D48_RS08640 PF00072 Response regulator receiver domain A1D48_RS08645 PF07308 Protein of unknown function (DUF1456) A1D48_RS08655 PF06998 Protein of unknown function (DUF1307) A1D48_RS08660 PF09334 tRNA synthetases class I (M) A1D48_RS08660 PF01588 Putative tRNA binding domain A1D48_RS08665 PF10609 NUBPL iron-transfer P-loop NTPase A1D48_RS08680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS08680 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS08685 PF00577 Outer membrane usher protein A1D48_RS08685 PF13954 PapC N-terminal domain A1D48_RS08685 PF13953 PapC C-terminal domain A1D48_RS08690 PF00419 Fimbrial protein A1D48_RS08695 PF11776 Nickel/cobalt transporter regulator A1D48_RS08700 PF02110 Hydroxyethylthiazole kinase family A1D48_RS08705 PF08543 Phosphomethylpyrimidine kinase A1D48_RS08710 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS08710 PF07702 UTRA domain A1D48_RS08715 PF00294 pfkB family carbohydrate kinase A1D48_RS08720 PF03747 ADP-ribosylglycohydrolase A1D48_RS08725 PF03825 Nucleoside H+ symporter A1D48_RS08730 PF01791 DeoC/LacD family aldolase A1D48_RS08735 PF00781 Diacylglycerol kinase catalytic domain A1D48_RS08745 PF05932 Tir chaperone protein (CesT) family A1D48_RS08755 PF16325 Peptidase family U32 C-terminal domain A1D48_RS08755 PF01136 Peptidase family U32 A1D48_RS08805 PF03130 PBS lyase HEAT-like repeat A1D48_RS08825 PF12759 InsA C-terminal domain A1D48_RS08825 PF03811 InsA N-terminal domain A1D48_RS08860 PF00072 Response regulator receiver domain A1D48_RS08860 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS08865 PF00672 HAMP domain A1D48_RS08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS08865 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS08870 PF07690 Major Facilitator Superfamily A1D48_RS08875 PF00873 AcrB/AcrD/AcrF family A1D48_RS08880 PF00873 AcrB/AcrD/AcrF family A1D48_RS08885 PF13533 Biotin-lipoyl like A1D48_RS08895 PF00012 Hsp70 protein A1D48_RS08905 PF06029 AlkA N-terminal domain A1D48_RS08905 PF00730 HhH-GPD superfamily base excision DNA repair protein A1D48_RS08910 PF05231 MASE1 A1D48_RS08910 PF00990 Diguanylate cyclase, GGDEF domain A1D48_RS08910 PF00563 EAL domain A1D48_RS08910 PF08447 PAS fold A1D48_RS08910 PF13426 PAS domain A1D48_RS08910 PF08448 PAS fold A1D48_RS08915 PF00485 Phosphoribulokinase / Uridine kinase family A1D48_RS08920 PF00692 dUTPase A1D48_RS08925 PF05170 AsmA family A1D48_RS08930 PF03741 Integral membrane protein TerC family A1D48_RS08930 PF03471 Transporter associated domain A1D48_RS08930 PF00571 CBS domain A1D48_RS08940 PF18412 Outer-membrane lipoprotein Wza C-terminal domain A1D48_RS08940 PF10531 SLBB domain A1D48_RS08940 PF02563 Polysaccharide biosynthesis/export protein A1D48_RS08945 PF01451 Low molecular weight phosphotyrosine protein phosphatase A1D48_RS08950 PF13807 G-rich domain on putative tyrosine kinase A1D48_RS08950 PF02706 Chain length determinant protein A1D48_RS08950 PF13614 AAA domain A1D48_RS08955 PF00535 Glycosyl transferase family 2 A1D48_RS08960 PF00132 Bacterial transferase hexapeptide (six repeats) A1D48_RS08965 PF13439 Glycosyltransferase Family 4 A1D48_RS08965 PF00534 Glycosyl transferases group 1 A1D48_RS08975 PF00535 Glycosyl transferase family 2 A1D48_RS08980 PF00132 Bacterial transferase hexapeptide (six repeats) A1D48_RS08985 PF16363 GDP-mannose 4,6 dehydratase A1D48_RS08990 PF01370 NAD dependent epimerase/dehydratase family A1D48_RS08995 PF00293 NUDIX domain A1D48_RS09000 PF00534 Glycosyl transferases group 1 A1D48_RS09000 PF13579 Glycosyl transferase 4-like domain A1D48_RS09005 PF01050 Mannose-6-phosphate isomerase A1D48_RS09005 PF00483 Nucleotidyl transferase A1D48_RS09010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A1D48_RS09010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A1D48_RS09010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A1D48_RS09010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A1D48_RS09015 PF02397 Bacterial sugar transferase A1D48_RS09025 PF04230 Polysaccharide pyruvyl transferase A1D48_RS09030 PF13439 Glycosyltransferase Family 4 A1D48_RS09030 PF00534 Glycosyl transferases group 1 A1D48_RS09040 PF00483 Nucleotidyl transferase A1D48_RS09045 PF16363 GDP-mannose 4,6 dehydratase A1D48_RS09050 PF04321 RmlD substrate binding domain A1D48_RS09055 PF00483 Nucleotidyl transferase A1D48_RS09060 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase A1D48_RS09080 PF00535 Glycosyl transferase family 2 A1D48_RS09085 PF00483 Nucleotidyl transferase A1D48_RS09085 PF01050 Mannose-6-phosphate isomerase A1D48_RS09090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A1D48_RS09090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A1D48_RS09090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A1D48_RS09090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A1D48_RS09095 PF02397 Bacterial sugar transferase A1D48_RS09100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A1D48_RS09100 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A1D48_RS09110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A1D48_RS09110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A1D48_RS09115 PF02706 Chain length determinant protein A1D48_RS09120 PF01502 Phosphoribosyl-AMP cyclohydrolase A1D48_RS09120 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A1D48_RS09125 PF00977 Histidine biosynthesis protein A1D48_RS09130 PF00977 Histidine biosynthesis protein A1D48_RS09135 PF00117 Glutamine amidotransferase class-I A1D48_RS09140 PF00475 Imidazoleglycerol-phosphate dehydratase A1D48_RS09145 PF00155 Aminotransferase class I and II A1D48_RS09150 PF00815 Histidinol dehydrogenase A1D48_RS09155 PF08029 HisG, C-terminal domain A1D48_RS09155 PF01634 ATP phosphoribosyltransferase A1D48_RS09165 PF01370 NAD dependent epimerase/dehydratase family A1D48_RS09170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS09170 PF03466 LysR substrate binding domain A1D48_RS09180 PF13520 Amino acid permease A1D48_RS09185 PF00929 Exonuclease A1D48_RS09185 PF08411 Exonuclease C-terminal A1D48_RS09190 PF13979 SopA-like catalytic domain A1D48_RS09190 PF13981 SopA-like central domain A1D48_RS09205 PF01568 Molydopterin dinucleotide binding domain A1D48_RS09205 PF00384 Molybdopterin oxidoreductase A1D48_RS09205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS09210 PF12800 4Fe-4S binding domain A1D48_RS09210 PF13247 4Fe-4S dicluster domain A1D48_RS09215 PF01292 Prokaryotic cytochrome b561 A1D48_RS09220 PF07943 Penicillin-binding protein 5, C-terminal domain A1D48_RS09220 PF00768 D-alanyl-D-alanine carboxypeptidase A1D48_RS09225 PF06445 GyrI-like small molecule binding domain A1D48_RS09230 PF04632 Fusaric acid resistance protein family A1D48_RS09235 PF04363 Protein of unknown function (DUF496) A1D48_RS09240 PF00288 GHMP kinases N terminal domain A1D48_RS09245 PF00871 Acetokinase family A1D48_RS09250 PF10662 Ethanolamine utilisation - propanediol utilisation A1D48_RS09255 PF00936 BMC domain A1D48_RS09265 PF10531 SLBB domain A1D48_RS09265 PF13375 RnfC Barrel sandwich hybrid domain A1D48_RS09265 PF13237 4Fe-4S dicluster domain A1D48_RS09265 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A1D48_RS09270 PF00171 Aldehyde dehydrogenase family A1D48_RS09270 PF00465 Iron-containing alcohol dehydrogenase A1D48_RS09275 PF00171 Aldehyde dehydrogenase family A1D48_RS09280 PF01923 Cobalamin adenosyltransferase A1D48_RS09285 PF03319 Ethanolamine utilisation protein EutN/carboxysome A1D48_RS09295 PF06130 Phosphate propanoyltransferase A1D48_RS09300 PF00936 BMC domain A1D48_RS09305 PF00936 BMC domain A1D48_RS09315 PF08841 Diol dehydratase reactivase ATPase-like domain A1D48_RS09315 PF18427 DD-reactivating factor swiveling domain A1D48_RS09320 PF02287 Dehydratase small subunit A1D48_RS09325 PF02288 Dehydratase medium subunit A1D48_RS09330 PF02286 Dehydratase large subunit A1D48_RS09335 PF00936 BMC domain A1D48_RS09340 PF00936 BMC domain A1D48_RS09345 PF00230 Major intrinsic protein A1D48_RS09350 PF12833 Helix-turn-helix domain A1D48_RS09350 PF10114 Sensory domain found in PocR A1D48_RS09355 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A1D48_RS09355 PF07685 CobB/CobQ-like glutamine amidotransferase domain A1D48_RS09360 PF03186 CobD/Cbib protein A1D48_RS09365 PF02570 Precorrin-8X methylmutase A1D48_RS09370 PF01888 CbiD A1D48_RS09375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A1D48_RS09380 PF05175 Methyltransferase small domain A1D48_RS09385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A1D48_RS09390 PF11760 Cobalamin synthesis G N-terminal A1D48_RS09390 PF01890 Cobalamin synthesis G C-terminus A1D48_RS09390 PF11761 Cobalamin biosynthesis central region A1D48_RS09395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A1D48_RS09400 PF02571 Precorrin-6x reductase CbiJ/CobK A1D48_RS09405 PF06180 Cobalt chelatase (CbiK) A1D48_RS09410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A1D48_RS09415 PF01891 Cobalt uptake substrate-specific transmembrane region A1D48_RS09420 PF02553 Cobalt transport protein component CbiN A1D48_RS09425 PF02361 Cobalt transport protein A1D48_RS09430 PF00005 ABC transporter A1D48_RS09435 PF07685 CobB/CobQ-like glutamine amidotransferase domain A1D48_RS09440 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase A1D48_RS09445 PF02654 Cobalamin-5-phosphate synthase A1D48_RS09450 PF02277 Phosphoribosyltransferase A1D48_RS09455 PF17969 L,D-transpeptidase C-terminal domain A1D48_RS09455 PF03734 L,D-transpeptidase catalytic domain A1D48_RS09465 PF01022 Bacterial regulatory protein, arsR family A1D48_RS09470 PF01451 Low molecular weight phosphotyrosine protein phosphatase A1D48_RS09475 PF06953 Arsenical resistance operon trans-acting repressor ArsD A1D48_RS09480 PF02374 Anion-transporting ATPase A1D48_RS09485 PF01758 Sodium Bile acid symporter family A1D48_RS09505 PF01554 MatE A1D48_RS09530 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus A1D48_RS09530 PF01048 Phosphorylase superfamily A1D48_RS09580 PF13356 Arm DNA-binding domain A1D48_RS09580 PF00589 Phage integrase family A1D48_RS09610 PF13693 Winged helix-turn-helix DNA-binding A1D48_RS09625 PF00589 Phage integrase family A1D48_RS09625 PF13356 Arm DNA-binding domain A1D48_RS09640 PF06167 Glucose-regulated metallo-peptidase M90 A1D48_RS09735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A1D48_RS09740 PF02811 PHP domain A1D48_RS09745 PF02613 Nitrate reductase delta subunit A1D48_RS09750 PF06496 Protein of unknown function (DUF1097) A1D48_RS09755 PF03783 Curli production assembly/transport component CsgG A1D48_RS09760 PF10614 Type VIII secretion system (T8SS), CsgF protein A1D48_RS09765 PF10627 Curli assembly protein CsgE A1D48_RS09770 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS09780 PF07012 Curlin associated repeat A1D48_RS09785 PF07012 Curlin associated repeat A1D48_RS09790 PF10610 Thin aggregative fimbriae synthesis protein A1D48_RS09800 PF01661 Macro domain A1D48_RS09805 PF13091 PLD-like domain A1D48_RS09810 PF01757 Acyltransferase family A1D48_RS09815 PF04349 Periplasmic glucan biosynthesis protein, MdoG A1D48_RS09820 PF00535 Glycosyl transferase family 2 A1D48_RS09825 PF07119 Protein of unknown function (DUF1375) A1D48_RS09830 PF13984 MsyB protein A1D48_RS09835 PF07690 Major Facilitator Superfamily A1D48_RS09845 PF03279 Bacterial lipid A biosynthesis acyltransferase A1D48_RS09850 PF12368 Rhodanase C-terminal A1D48_RS09850 PF17773 UPF0176 acylphosphatase like domain A1D48_RS09850 PF00581 Rhodanese-like domain A1D48_RS09855 PF04264 YceI-like domain A1D48_RS09860 PF01292 Prokaryotic cytochrome b561 A1D48_RS09870 PF10968 Protein of unknown function (DUF2770) A1D48_RS09875 PF01266 FAD dependent oxidoreductase A1D48_RS09880 PF13991 BssS protein family A1D48_RS09885 PF06183 DinI-like family A1D48_RS09890 PF01979 Amidohydrolase family A1D48_RS09895 PF07273 Protein of unknown function (DUF1439) A1D48_RS09900 PF13417 Glutathione S-transferase, N-terminal domain A1D48_RS09900 PF04399 Glutaredoxin 2, C terminal domain A1D48_RS09905 PF07690 Major Facilitator Superfamily A1D48_RS09910 PF13302 Acetyltransferase (GNAT) domain A1D48_RS09915 PF04337 Protein of unknown function, DUF480 A1D48_RS09920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A1D48_RS09925 PF03023 Lipid II flippase MurJ A1D48_RS09930 PF05130 FlgN protein A1D48_RS09935 PF04316 Anti-sigma-28 factor, FlgM A1D48_RS09940 PF13144 Chaperone for flagella basal body P-ring formation A1D48_RS09950 PF00460 Flagella basal body rod protein A1D48_RS09955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A1D48_RS09955 PF00460 Flagella basal body rod protein A1D48_RS09960 PF13861 FlgD Tudor-like domain A1D48_RS09960 PF03963 Flagellar hook capping protein - N-terminal region A1D48_RS09960 PF13860 FlgD Ig-like domain A1D48_RS09965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A1D48_RS09965 PF00460 Flagella basal body rod protein A1D48_RS09965 PF07559 Flagellar basal body protein FlaE A1D48_RS09970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A1D48_RS09970 PF00460 Flagella basal body rod protein A1D48_RS09975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A1D48_RS09975 PF00460 Flagella basal body rod protein A1D48_RS09980 PF02107 Flagellar L-ring protein A1D48_RS09985 PF02119 Flagellar P-ring protein A1D48_RS09990 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A1D48_RS09990 PF10135 Rod binding protein A1D48_RS09995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A1D48_RS09995 PF00460 Flagella basal body rod protein A1D48_RS10000 PF00669 Bacterial flagellin N-terminal helical region A1D48_RS10010 PF10150 Ribonuclease E/G family A1D48_RS10010 PF12111 Polyribonucleotide phosphorylase C terminal A1D48_RS10010 PF00575 S1 RNA binding domain A1D48_RS10020 PF01479 S4 domain A1D48_RS10020 PF00849 RNA pseudouridylate synthase A1D48_RS10035 PF02545 Maf-like protein A1D48_RS10040 PF02620 Large ribosomal RNA subunit accumulation protein YceD A1D48_RS10045 PF01783 Ribosomal L32p protein family A1D48_RS10050 PF02504 Fatty acid synthesis protein A1D48_RS10055 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A1D48_RS10055 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A1D48_RS10060 PF00698 Acyl transferase domain A1D48_RS10070 PF00550 Phosphopantetheine attachment site A1D48_RS10075 PF02801 Beta-ketoacyl synthase, C-terminal domain A1D48_RS10075 PF00109 Beta-ketoacyl synthase, N-terminal domain A1D48_RS10080 PF01063 Amino-transferase class IV A1D48_RS10085 PF02618 YceG-like family A1D48_RS10090 PF02223 Thymidylate kinase A1D48_RS10095 PF09115 DNA polymerase III, delta subunit, C terminal A1D48_RS10100 PF01026 TatD related DNase A1D48_RS10105 PF02378 Phosphotransferase system, EIIC A1D48_RS10105 PF00367 phosphotransferase system, EIIB A1D48_RS10110 PF07715 TonB-dependent Receptor Plug Domain A1D48_RS10110 PF00593 TonB dependent receptor A1D48_RS10115 PF01230 HIT domain A1D48_RS10120 PF07233 Protein of unknown function (DUF1425) A1D48_RS10125 PF13036 Peptidoglycan-synthase activator LpoB A1D48_RS10130 PF01636 Phosphotransferase enzyme family A1D48_RS10135 PF00933 Glycosyl hydrolase family 3 N terminal domain A1D48_RS10140 PF05728 Uncharacterised protein family (UPF0227) A1D48_RS10145 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS10150 PF05433 Glycine zipper 2TM domain A1D48_RS10155 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS10160 PF07338 Protein of unknown function (DUF1471) A1D48_RS10165 PF17969 L,D-transpeptidase C-terminal domain A1D48_RS10165 PF01476 LysM domain A1D48_RS10165 PF03734 L,D-transpeptidase catalytic domain A1D48_RS10170 PF17757 UvrB interaction domain A1D48_RS10170 PF00271 Helicase conserved C-terminal domain A1D48_RS10170 PF03461 TRCF domain A1D48_RS10170 PF00270 DEAD/DEAH box helicase A1D48_RS10170 PF02559 CarD-like/TRCF domain A1D48_RS10175 PF02687 FtsX-like permease family A1D48_RS10175 PF12704 MacB-like periplasmic core domain A1D48_RS10180 PF00005 ABC transporter A1D48_RS10185 PF12704 MacB-like periplasmic core domain A1D48_RS10185 PF02687 FtsX-like permease family A1D48_RS10190 PF00480 ROK family A1D48_RS10195 PF02146 Sir2 family A1D48_RS10200 PF13416 Bacterial extracellular solute-binding protein A1D48_RS10205 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS10210 PF06767 Sif protein A1D48_RS10215 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS10220 PF00005 ABC transporter A1D48_RS10220 PF08402 TOBE domain A1D48_RS10225 PF01546 Peptidase family M20/M25/M40 A1D48_RS10225 PF07687 Peptidase dimerisation domain A1D48_RS10235 PF08007 Cupin superfamily protein A1D48_RS10240 PF08918 PhoQ Sensor A1D48_RS10240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS10245 PF00072 Response regulator receiver domain A1D48_RS10245 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS10250 PF08328 Adenylosuccinate lyase C-terminal A1D48_RS10250 PF00206 Lyase A1D48_RS10255 PF04356 Protein of unknown function (DUF489) A1D48_RS10265 PF00293 NUDIX domain A1D48_RS10275 PF00849 RNA pseudouridylate synthase A1D48_RS10280 PF00180 Isocitrate/isopropylmalate dehydrogenase A1D48_RS10320 PF06183 DinI-like family A1D48_RS10325 PF00652 Ricin-type beta-trefoil lectin domain A1D48_RS10330 PF00313 'Cold-shock' DNA-binding domain A1D48_RS10350 PF06316 Enterobacterial Ail/Lom protein A1D48_RS10380 PF00011 Hsp20/alpha crystallin family A1D48_RS10395 PF01292 Prokaryotic cytochrome b561 A1D48_RS10405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A1D48_RS10410 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS10415 PF12911 N-terminal TM domain of oligopeptide transport permease C A1D48_RS10415 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS10420 PF00005 ABC transporter A1D48_RS10425 PF00005 ABC transporter A1D48_RS10430 PF00924 Mechanosensitive ion channel A1D48_RS10445 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment A1D48_RS10450 PF13427 Domain of unknown function (DUF4111) A1D48_RS10450 PF01909 Nucleotidyltransferase domain A1D48_RS10460 PF00376 MerR family regulatory protein A1D48_RS10460 PF09278 MerR, DNA binding A1D48_RS10475 PF01817 Chorismate mutase type II A1D48_RS10480 PF01810 LysE type translocator A1D48_RS10490 PF09313 Domain of unknown function (DUF1971) A1D48_RS10495 PF08956 Domain of unknown function (DUF1869) A1D48_RS10505 PF04226 Transglycosylase associated protein A1D48_RS10515 PF03891 Domain of unknown function (DUF333) A1D48_RS10525 PF04343 Protein of unknown function, DUF488 A1D48_RS10530 PF07690 Major Facilitator Superfamily A1D48_RS10535 PF02311 AraC-like ligand binding domain A1D48_RS10535 PF12833 Helix-turn-helix domain A1D48_RS10540 PF04284 Protein of unknown function (DUF441) A1D48_RS10550 PF04073 Aminoacyl-tRNA editing domain A1D48_RS10555 PF00990 Diguanylate cyclase, GGDEF domain A1D48_RS10555 PF17155 Gammaproteobacterial periplasmic sensor domain A1D48_RS10565 PF04285 Protein of unknown function (DUF444) A1D48_RS10570 PF08298 PrkA AAA domain A1D48_RS10570 PF06798 PrkA serine protein kinase C-terminal domain A1D48_RS10575 PF06629 MltA-interacting protein MipA A1D48_RS10580 PF13186 Iron-sulfur cluster-binding domain A1D48_RS10580 PF04055 Radical SAM superfamily A1D48_RS10585 PF00248 Aldo/keto reductase family A1D48_RS10590 PF01263 Aldose 1-epimerase A1D48_RS10600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A1D48_RS10600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A1D48_RS10605 PF01641 SelR domain A1D48_RS10610 PF07023 Protein of unknown function (DUF1315) A1D48_RS10615 PF00857 Isochorismatase family A1D48_RS10620 PF00710 Asparaginase, N-terminal A1D48_RS10620 PF17763 Glutaminase/Asparaginase C-terminal domain A1D48_RS10625 PF01343 Peptidase family S49 A1D48_RS10630 PF00881 Nitroreductase family A1D48_RS10635 PF02769 AIR synthase related protein, C-terminal domain A1D48_RS10635 PF00586 AIR synthase related protein, N-terminal domain A1D48_RS10640 PF01751 Toprim domain A1D48_RS10640 PF01131 DNA topoisomerase A1D48_RS10645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A1D48_RS10645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A1D48_RS10650 PF07383 Protein of unknown function (DUF1496) A1D48_RS10655 PF00293 NUDIX domain A1D48_RS10660 PF03372 Endonuclease/Exonuclease/phosphatase family A1D48_RS10670 PF00202 Aminotransferase class-III A1D48_RS10675 PF04958 Arginine N-succinyltransferase beta subunit A1D48_RS10680 PF00171 Aldehyde dehydrogenase family A1D48_RS10685 PF04996 Succinylarginine dihydrolase A1D48_RS10690 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family A1D48_RS10700 PF07813 LTXXQ motif family protein A1D48_RS10710 PF02540 NAD synthase A1D48_RS10715 PF04355 SmpA / OmlA family A1D48_RS10725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A1D48_RS10730 PF02378 Phosphotransferase system, EIIC A1D48_RS10735 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit A1D48_RS10740 PF07883 Cupin domain A1D48_RS10740 PF12833 Helix-turn-helix domain A1D48_RS10745 PF02056 Family 4 glycosyl hydrolase A1D48_RS10745 PF11975 Family 4 glycosyl hydrolase C-terminal domain A1D48_RS10750 PF04794 YdjC-like protein A1D48_RS10755 PF18011 C-terminal domain found in long catalases A1D48_RS10755 PF06628 Catalase-related immune-responsive A1D48_RS10755 PF00199 Catalase A1D48_RS10760 PF10729 Cell division activator CedA A1D48_RS10765 PF00375 Sodium:dicarboxylate symporter family A1D48_RS10770 PF04307 LexA-binding, inner membrane-associated putative hydrolase A1D48_RS10775 PF13419 Haloacid dehalogenase-like hydrolase A1D48_RS10780 PF14002 YniB-like protein A1D48_RS10785 PF03881 Fructosamine kinase A1D48_RS10790 PF11080 Endoribonuclease GhoS A1D48_RS10795 PF00294 pfkB family carbohydrate kinase A1D48_RS10800 PF04338 Protein of unknown function, DUF481 A1D48_RS10815 PF01223 DNA/RNA non-specific endonuclease A1D48_RS10820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A1D48_RS10820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A1D48_RS10820 PF02824 TGS domain A1D48_RS10820 PF03129 Anticodon binding domain A1D48_RS10825 PF05198 Translation initiation factor IF-3, N-terminal domain A1D48_RS10825 PF00707 Translation initiation factor IF-3, C-terminal domain A1D48_RS10830 PF01632 Ribosomal protein L35 A1D48_RS10835 PF00453 Ribosomal protein L20 A1D48_RS10845 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A1D48_RS10845 PF01409 tRNA synthetases class II core domain (F) A1D48_RS10850 PF03147 Ferredoxin-fold anticodon binding domain A1D48_RS10850 PF01588 Putative tRNA binding domain A1D48_RS10850 PF03483 B3/4 domain A1D48_RS10850 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A1D48_RS10850 PF03484 tRNA synthetase B5 domain A1D48_RS10855 PF00216 Bacterial DNA-binding protein A1D48_RS10860 PF01032 FecCD transport family A1D48_RS10865 PF00255 Glutathione peroxidase A1D48_RS10870 PF00005 ABC transporter A1D48_RS10875 PF00877 NlpC/P60 family A1D48_RS10880 PF00563 EAL domain A1D48_RS10885 PF02696 Uncharacterized ACR, YdiU/UPF0061 family A1D48_RS10890 PF10636 Hemin uptake protein hemP A1D48_RS10895 PF00793 DAHP synthetase I family A1D48_RS10900 PF03618 Kinase/pyrophosphorylase A1D48_RS10905 PF00391 PEP-utilising enzyme, mobile domain A1D48_RS10905 PF02896 PEP-utilising enzyme, TIM barrel domain A1D48_RS10905 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A1D48_RS10910 PF00501 AMP-binding enzyme A1D48_RS10910 PF13193 AMP-binding enzyme C-terminal domain A1D48_RS10920 PF01494 FAD binding domain A1D48_RS10925 PF00766 Electron transfer flavoprotein FAD-binding domain A1D48_RS10925 PF01012 Electron transfer flavoprotein domain A1D48_RS10930 PF01012 Electron transfer flavoprotein domain A1D48_RS10935 PF12833 Helix-turn-helix domain A1D48_RS10935 PF02311 AraC-like ligand binding domain A1D48_RS10940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A1D48_RS10940 PF02770 Acyl-CoA dehydrogenase, middle domain A1D48_RS10940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A1D48_RS10945 PF01144 Coenzyme A transferase A1D48_RS10950 PF01487 Type I 3-dehydroquinase A1D48_RS10955 PF08501 Shikimate dehydrogenase substrate binding domain A1D48_RS10955 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A1D48_RS10960 PF07690 Major Facilitator Superfamily A1D48_RS10965 PF07690 Major Facilitator Superfamily A1D48_RS10970 PF08965 Domain of unknown function (DUF1870) A1D48_RS10980 PF01594 AI-2E family transporter A1D48_RS10985 PF02913 FAD linked oxidases, C-terminal domain A1D48_RS10985 PF01565 FAD binding domain A1D48_RS10985 PF13183 4Fe-4S dicluster domain A1D48_RS10990 PF03061 Thioesterase superfamily A1D48_RS10995 PF15930 Domain of unknown function A1D48_RS11000 PF00375 Sodium:dicarboxylate symporter family A1D48_RS11005 PF01521 Iron-sulphur cluster biosynthesis A1D48_RS11010 PF01458 Uncharacterized protein family (UPF0051) A1D48_RS11015 PF00005 ABC transporter A1D48_RS11020 PF01458 Uncharacterized protein family (UPF0051) A1D48_RS11025 PF00266 Aminotransferase class-V A1D48_RS11030 PF02657 Fe-S metabolism associated domain A1D48_RS11035 PF17969 L,D-transpeptidase C-terminal domain A1D48_RS11035 PF03734 L,D-transpeptidase catalytic domain A1D48_RS11035 PF01476 LysM domain A1D48_RS11040 PF04728 Lipoprotein leucine-zipper A1D48_RS11045 PF04728 Lipoprotein leucine-zipper A1D48_RS11050 PF00224 Pyruvate kinase, barrel domain A1D48_RS11050 PF02887 Pyruvate kinase, alpha/beta domain A1D48_RS11060 PF00324 Amino acid permease A1D48_RS11065 PF00561 alpha/beta hydrolase fold A1D48_RS11075 PF00294 pfkB family carbohydrate kinase A1D48_RS11080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS11080 PF01568 Molydopterin dinucleotide binding domain A1D48_RS11080 PF00384 Molybdopterin oxidoreductase A1D48_RS11085 PF03916 Polysulphide reductase, NrfD A1D48_RS11090 PF13247 4Fe-4S dicluster domain A1D48_RS11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS11095 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS11100 PF00072 Response regulator receiver domain A1D48_RS11100 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS11105 PF10965 Protein of unknown function (DUF2767) A1D48_RS11110 PF08349 Protein of unknown function (DUF1722) A1D48_RS11115 PF13411 MerR HTH family regulatory protein A1D48_RS11120 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS11120 PF00072 Response regulator receiver domain A1D48_RS11125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A1D48_RS11125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS11125 PF00672 HAMP domain A1D48_RS11125 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS11125 PF00072 Response regulator receiver domain A1D48_RS11125 PF01627 Hpt domain A1D48_RS11135 PF00263 Bacterial type II and III secretion system protein A1D48_RS11135 PF03958 Bacterial type II/III secretion system short domain A1D48_RS11155 PF03433 EspA-like secreted protein A1D48_RS11165 PF04888 Secretion system effector C (SseC) like family A1D48_RS11170 PF05802 Enterobacterial EspB protein A1D48_RS11210 PF01514 Secretory protein of YscJ/FliF family A1D48_RS11225 PF07201 HrpJ-like domain A1D48_RS11235 PF00771 FHIPEP family A1D48_RS11240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A1D48_RS11240 PF18269 T3SS EscN ATPase C-terminal domain A1D48_RS11255 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A1D48_RS11260 PF00813 FliP family A1D48_RS11265 PF01313 Bacterial export proteins, family 3 A1D48_RS11270 PF01311 Bacterial export proteins, family 1 A1D48_RS11275 PF01312 FlhB HrpN YscU SpaS Family A1D48_RS11290 PF01554 MatE A1D48_RS11295 PF00677 Lumazine binding domain A1D48_RS11305 PF07690 Major Facilitator Superfamily A1D48_RS11310 PF03466 LysR substrate binding domain A1D48_RS11310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS11315 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS11330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A1D48_RS11330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A1D48_RS11335 PF00877 NlpC/P60 family A1D48_RS11340 PF00462 Glutaredoxin A1D48_RS11350 PF00929 Exonuclease A1D48_RS11355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A1D48_RS11360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A1D48_RS11365 PF16925 Tetracyclin repressor-like, C-terminal domain A1D48_RS11365 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS11370 PF06945 Protein of unknown function (DUF1289) A1D48_RS11375 PF00248 Aldo/keto reductase family A1D48_RS11380 PF00080 Copper/zinc superoxide dismutase (SODC) A1D48_RS11385 PF04632 Fusaric acid resistance protein family A1D48_RS11390 PF00529 HlyD membrane-fusion protein of T1SS A1D48_RS11390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A1D48_RS11395 PF07869 Protein of unknown function (DUF1656) A1D48_RS11400 PF01047 MarR family A1D48_RS11405 PF05433 Glycine zipper 2TM domain A1D48_RS11410 PF03702 Anhydro-N-acetylmuramic acid kinase A1D48_RS11415 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme A1D48_RS11420 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A1D48_RS11420 PF01243 Pyridoxamine 5'-phosphate oxidase A1D48_RS11425 PF01479 S4 domain A1D48_RS11425 PF00579 tRNA synthetases class I (W and Y) A1D48_RS11430 PF08543 Phosphomethylpyrimidine kinase A1D48_RS11435 PF00043 Glutathione S-transferase, C-terminal domain A1D48_RS11435 PF02798 Glutathione S-transferase, N-terminal domain A1D48_RS11440 PF00854 POT family A1D48_RS11445 PF00633 Helix-hairpin-helix motif A1D48_RS11445 PF00730 HhH-GPD superfamily base excision DNA repair protein A1D48_RS11445 PF10576 Iron-sulfur binding domain of endonuclease III A1D48_RS11450 PF02508 Rnf-Nqr subunit, membrane protein A1D48_RS11455 PF04205 FMN-binding domain A1D48_RS11460 PF03116 NQR2, RnfD, RnfE family A1D48_RS11465 PF10531 SLBB domain A1D48_RS11465 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A1D48_RS11465 PF12838 4Fe-4S dicluster domain A1D48_RS11465 PF13375 RnfC Barrel sandwich hybrid domain A1D48_RS11470 PF04060 Putative Fe-S cluster A1D48_RS11475 PF02508 Rnf-Nqr subunit, membrane protein A1D48_RS11480 PF10754 Protein of unknown function (DUF2569) A1D48_RS11485 PF05321 Haemolysin expression modulating protein A1D48_RS11495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A1D48_RS11495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A1D48_RS11500 PF00962 Adenosine/AMP deaminase A1D48_RS11505 PF00155 Aminotransferase class I and II A1D48_RS11515 PF06097 Bacterial protein of unknown function (DUF945) A1D48_RS11520 PF01238 Phosphomannose isomerase type I A1D48_RS11525 PF05683 Fumarase C-terminus A1D48_RS11525 PF05681 Fumarate hydratase (Fumerase) A1D48_RS11530 PF00206 Lyase A1D48_RS11530 PF10415 Fumarase C C-terminus A1D48_RS11535 PF05472 DNA replication terminus site-binding protein (Ter protein) A1D48_RS11540 PF00672 HAMP domain A1D48_RS11540 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS11540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS11545 PF01979 Amidohydrolase family A1D48_RS11545 PF13382 Adenine deaminase C-terminal domain A1D48_RS11550 PF00267 Gram-negative porin A1D48_RS11560 PF00072 Response regulator receiver domain A1D48_RS11560 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS11565 PF06942 GlpM protein A1D48_RS11570 PF13520 Amino acid permease A1D48_RS11575 PF07338 Protein of unknown function (DUF1471) A1D48_RS11580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A1D48_RS11580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A1D48_RS11580 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch A1D48_RS11585 PF02233 NAD(P) transhydrogenase beta subunit A1D48_RS11590 PF01594 AI-2E family transporter A1D48_RS11600 PF00893 Small Multidrug Resistance protein A1D48_RS11605 PF00893 Small Multidrug Resistance protein A1D48_RS11610 PF00089 Trypsin A1D48_RS11620 PF07690 Major Facilitator Superfamily A1D48_RS11625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS11625 PF03466 LysR substrate binding domain A1D48_RS11635 PF00480 ROK family A1D48_RS11645 PF00654 Voltage gated chloride channel A1D48_RS11650 PF00005 ABC transporter A1D48_RS11650 PF00571 CBS domain A1D48_RS11655 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS11660 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A1D48_RS11665 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS11670 PF02613 Nitrate reductase delta subunit A1D48_RS11675 PF04976 DMSO reductase anchor subunit (DmsC) A1D48_RS11680 PF13247 4Fe-4S dicluster domain A1D48_RS11680 PF12800 4Fe-4S binding domain A1D48_RS11685 PF01568 Molydopterin dinucleotide binding domain A1D48_RS11685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS11685 PF00384 Molybdopterin oxidoreductase A1D48_RS11690 PF01568 Molydopterin dinucleotide binding domain A1D48_RS11690 PF00384 Molybdopterin oxidoreductase A1D48_RS11690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS11695 PF06649 Protein of unknown function (DUF1161) A1D48_RS11700 PF06788 Uncharacterised protein family (UPF0257) A1D48_RS11705 PF13302 Acetyltransferase (GNAT) domain A1D48_RS11710 PF06932 Protein of unknown function (DUF1283) A1D48_RS11715 PF02694 Uncharacterised BCR, YnfA/UPF0060 family A1D48_RS11720 PF13378 Enolase C-terminal domain-like A1D48_RS11720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A1D48_RS11725 PF00107 Zinc-binding dehydrogenase A1D48_RS11725 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS11730 PF07690 Major Facilitator Superfamily A1D48_RS11730 PF00083 Sugar (and other) transporter A1D48_RS11735 PF01232 Mannitol dehydrogenase Rossmann domain A1D48_RS11735 PF08125 Mannitol dehydrogenase C-terminal domain A1D48_RS11740 PF14001 YdfZ protein A1D48_RS11745 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS11745 PF07729 FCD domain A1D48_RS11750 PF00106 short chain dehydrogenase A1D48_RS11755 PF01432 Peptidase family M3 A1D48_RS11765 PF10685 Stress-induced bacterial acidophilic repeat motif A1D48_RS11770 PF02464 Competence-damaged protein A1D48_RS11775 PF04076 Bacterial OB fold (BOF) protein A1D48_RS11790 PF07690 Major Facilitator Superfamily A1D48_RS11795 PF00892 EamA-like transporter family A1D48_RS11800 PF13999 MarB protein A1D48_RS11805 PF12833 Helix-turn-helix domain A1D48_RS11810 PF01047 MarR family A1D48_RS11815 PF01914 MarC family integral membrane protein A1D48_RS11820 PF07690 Major Facilitator Superfamily A1D48_RS11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS11825 PF03466 LysR substrate binding domain A1D48_RS11830 PF00171 Aldehyde dehydrogenase family A1D48_RS11835 PF04960 Glutaminase A1D48_RS11840 PF13811 Domain of unknown function (DUF4186) A1D48_RS11845 PF01062 Bestrophin, RFP-TM, chloride channel A1D48_RS11855 PF00267 Gram-negative porin A1D48_RS11860 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA A1D48_RS11870 PF04809 HupH hydrogenase expression protein, C-terminal conserved region A1D48_RS11880 PF01455 HupF/HypC family A1D48_RS11885 PF01750 Hydrogenase maturation protease A1D48_RS11890 PF01292 Prokaryotic cytochrome b561 A1D48_RS11900 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A1D48_RS11900 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal A1D48_RS11910 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS11910 PF07729 FCD domain A1D48_RS11915 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS11915 PF00107 Zinc-binding dehydrogenase A1D48_RS11920 PF07690 Major Facilitator Superfamily A1D48_RS11930 PF07690 Major Facilitator Superfamily A1D48_RS11935 PF01494 FAD binding domain A1D48_RS11945 PF02547 Queuosine biosynthesis protein A1D48_RS11950 PF01042 Endoribonuclease L-PSP A1D48_RS12010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS12010 PF03466 LysR substrate binding domain A1D48_RS12015 PF03060 Nitronate monooxygenase A1D48_RS12025 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS12030 PF03553 Na+/H+ antiporter family A1D48_RS12035 PF00155 Aminotransferase class I and II A1D48_RS12040 PF00128 Alpha amylase, catalytic domain A1D48_RS12040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A1D48_RS12045 PF00128 Alpha amylase, catalytic domain A1D48_RS12050 PF00128 Alpha amylase, catalytic domain A1D48_RS12050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A1D48_RS12050 PF11941 Domain of unknown function (DUF3459) A1D48_RS12060 PF06411 HdeA/HdeB family A1D48_RS12065 PF02566 OsmC-like protein A1D48_RS12070 PF10684 Putative biofilm-dependent modulation protein A1D48_RS12075 PF08136 30S ribosomal protein subunit S22 family A1D48_RS12080 PF00390 Malic enzyme, N-terminal domain A1D48_RS12080 PF03949 Malic enzyme, NAD binding domain A1D48_RS12085 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS12085 PF00107 Zinc-binding dehydrogenase A1D48_RS12090 PF01292 Prokaryotic cytochrome b561 A1D48_RS12095 PF12800 4Fe-4S binding domain A1D48_RS12095 PF09163 Formate dehydrogenase N, transmembrane A1D48_RS12095 PF13247 4Fe-4S dicluster domain A1D48_RS12105 PF00892 EamA-like transporter family A1D48_RS12110 PF00267 Gram-negative porin A1D48_RS12120 PF07690 Major Facilitator Superfamily A1D48_RS12125 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS12130 PF07690 Major Facilitator Superfamily A1D48_RS12135 PF00384 Molybdopterin oxidoreductase A1D48_RS12135 PF01568 Molydopterin dinucleotide binding domain A1D48_RS12135 PF14710 Respiratory nitrate reductase alpha N-terminal A1D48_RS12140 PF13247 4Fe-4S dicluster domain A1D48_RS12140 PF14711 Respiratory nitrate reductase beta C-terminal A1D48_RS12145 PF02613 Nitrate reductase delta subunit A1D48_RS12150 PF02665 Nitrate reductase gamma subunit A1D48_RS12155 PF02567 Phenazine biosynthesis-like protein A1D48_RS12160 PF00797 N-acetyltransferase A1D48_RS12175 PF00324 Amino acid permease A1D48_RS12180 PF06004 Bacterial protein of unknown function (DUF903) A1D48_RS12190 PF00593 TonB dependent receptor A1D48_RS12190 PF07715 TonB-dependent Receptor Plug Domain A1D48_RS12200 PF16884 N-terminal domain of oxidoreductase A1D48_RS12200 PF00107 Zinc-binding dehydrogenase A1D48_RS12210 PF04657 Putative inner membrane exporter, YdcZ A1D48_RS12215 PF10735 Protein of unknown function (DUF2526) A1D48_RS12235 PF10753 Toxin GhoT_OrtT A1D48_RS12245 PF00171 Aldehyde dehydrogenase family A1D48_RS12250 PF00155 Aminotransferase class I and II A1D48_RS12250 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS12255 PF01427 D-ala-D-ala dipeptidase A1D48_RS12270 PF06767 Sif protein A1D48_RS12275 PF10829 Protein of unknown function (DUF2554) A1D48_RS12280 PF01136 Peptidase family U32 A1D48_RS12280 PF12392 Collagenase A1D48_RS12285 PF01381 Helix-turn-helix A1D48_RS12285 PF07883 Cupin domain A1D48_RS12290 PF03594 Benzoate membrane transport protein A1D48_RS12295 PF11769 Protein of unknown function (DUF3313) A1D48_RS12300 PF03848 Tellurite resistance protein TehB A1D48_RS12305 PF03595 Voltage-dependent anion channel A1D48_RS12310 PF18836 Beta solenoid repeat from YDCK A1D48_RS12315 PF13302 Acetyltransferase (GNAT) domain A1D48_RS12320 PF05343 M42 glutamyl aminopeptidase A1D48_RS12325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A1D48_RS12330 PF03611 PTS system sugar-specific permease component A1D48_RS12335 PF03437 BtpA family A1D48_RS12340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A1D48_RS12345 PF00834 Ribulose-phosphate 3 epimerase family A1D48_RS12350 PF00455 DeoR C terminal sensor domain A1D48_RS12350 PF08220 DeoR-like helix-turn-helix domain A1D48_RS12355 PF00583 Acetyltransferase (GNAT) family A1D48_RS12360 PF01070 FMN-dependent dehydrogenase A1D48_RS12365 PF04264 YceI-like domain A1D48_RS12370 PF04349 Periplasmic glucan biosynthesis protein, MdoG A1D48_RS12375 PF00135 Carboxylesterase family A1D48_RS12380 PF07063 Domain of unknown function (DUF1338) A1D48_RS12385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS12385 PF03466 LysR substrate binding domain A1D48_RS12390 PF02203 Tar ligand binding domain homologue A1D48_RS12390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A1D48_RS12390 PF00672 HAMP domain A1D48_RS12400 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS12400 PF00107 Zinc-binding dehydrogenase A1D48_RS12405 PF02583 Metal-sensitive transcriptional repressor A1D48_RS12420 PF00657 GDSL-like Lipase/Acylhydrolase A1D48_RS12420 PF06767 Sif protein A1D48_RS12430 PF00497 Bacterial extracellular solute-binding proteins, family 3 A1D48_RS12435 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS12440 PF00005 ABC transporter A1D48_RS12445 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS12455 PF08242 Methyltransferase domain A1D48_RS12460 PF01292 Prokaryotic cytochrome b561 A1D48_RS12465 PF02698 DUF218 domain A1D48_RS12470 PF11898 Domain of unknown function (DUF3418) A1D48_RS12470 PF04408 Helicase associated domain (HA2) A1D48_RS12470 PF00271 Helicase conserved C-terminal domain A1D48_RS12470 PF00270 DEAD/DEAH box helicase A1D48_RS12470 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold A1D48_RS12475 PF02525 Flavodoxin-like fold A1D48_RS12485 PF07027 Protein of unknown function (DUF1318) A1D48_RS12490 PF13617 YnbE-like lipoprotein A1D48_RS12495 PF11739 Dicarboxylate transport A1D48_RS12500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A1D48_RS12500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A1D48_RS12505 PF03724 META domain A1D48_RS12510 PF03891 Domain of unknown function (DUF333) A1D48_RS12520 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A1D48_RS12520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A1D48_RS12520 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase A1D48_RS12520 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A1D48_RS12520 PF10371 Domain of unknown function A1D48_RS12530 PF00582 Universal stress protein family A1D48_RS12535 PF00893 Small Multidrug Resistance protein A1D48_RS12555 PF01171 PP-loop family A1D48_RS12560 PF00271 Helicase conserved C-terminal domain A1D48_RS12560 PF00270 DEAD/DEAH box helicase A1D48_RS12560 PF03880 DbpA RNA binding domain A1D48_RS12570 PF01544 CorA-like Mg2+ transporter protein A1D48_RS12575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A1D48_RS12575 PF02203 Tar ligand binding domain homologue A1D48_RS12575 PF00672 HAMP domain A1D48_RS12585 PF01713 Smr domain A1D48_RS12590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A1D48_RS12590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A1D48_RS12595 PF00027 Cyclic nucleotide-binding domain A1D48_RS12595 PF13545 Crp-like helix-turn-helix domain A1D48_RS12600 PF00582 Universal stress protein family A1D48_RS12605 PF10749 Protein of unknown function (DUF2534) A1D48_RS12610 PF00924 Mechanosensitive ion channel A1D48_RS12630 PF08534 Redoxin A1D48_RS12650 PF12833 Helix-turn-helix domain A1D48_RS12650 PF06445 GyrI-like small molecule binding domain A1D48_RS12665 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS12675 PF00248 Aldo/keto reductase family A1D48_RS12680 PF03466 LysR substrate binding domain A1D48_RS12680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS12690 PF07690 Major Facilitator Superfamily A1D48_RS12700 PF03222 Tryptophan/tyrosine permease family A1D48_RS12705 PF13378 Enolase C-terminal domain-like A1D48_RS12705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A1D48_RS12715 PF03466 LysR substrate binding domain A1D48_RS12715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS12720 PF01568 Molydopterin dinucleotide binding domain A1D48_RS12720 PF00384 Molybdopterin oxidoreductase A1D48_RS12720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS12725 PF13247 4Fe-4S dicluster domain A1D48_RS12725 PF12800 4Fe-4S binding domain A1D48_RS12730 PF04976 DMSO reductase anchor subunit (DmsC) A1D48_RS12735 PF02613 Nitrate reductase delta subunit A1D48_RS12745 PF02627 Carboxymuconolactone decarboxylase family A1D48_RS12750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A1D48_RS12755 PF00246 Zinc carboxypeptidase A1D48_RS12760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A1D48_RS12760 PF13378 Enolase C-terminal domain-like A1D48_RS12765 PF08534 Redoxin A1D48_RS12770 PF00158 Sigma-54 interaction domain A1D48_RS12770 PF18024 Helix-turn-helix domain A1D48_RS12775 PF05128 Domain of unknown function (DUF697) A1D48_RS12780 PF04317 YcjX-like family, DUF463 A1D48_RS12785 PF00581 Rhodanese-like domain A1D48_RS12790 PF09584 Phage shock protein PspD (Phageshock_PspD) A1D48_RS12795 PF04024 PspC domain A1D48_RS12800 PF06667 Phage shock protein B A1D48_RS12805 PF04012 PspA/IM30 family A1D48_RS12810 PF02954 Bacterial regulatory protein, Fis family A1D48_RS12810 PF00158 Sigma-54 interaction domain A1D48_RS12815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A1D48_RS12820 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS12825 PF12911 N-terminal TM domain of oligopeptide transport permease C A1D48_RS12825 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS12830 PF00005 ABC transporter A1D48_RS12830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A1D48_RS12835 PF00005 ABC transporter A1D48_RS12870 PF00773 RNB domain A1D48_RS12870 PF08206 Ribonuclease B OB domain A1D48_RS12870 PF17876 Cold shock domain A1D48_RS12870 PF00575 S1 RNA binding domain A1D48_RS12880 PF13426 PAS domain A1D48_RS12880 PF00990 Diguanylate cyclase, GGDEF domain A1D48_RS12880 PF00563 EAL domain A1D48_RS12890 PF08220 DeoR-like helix-turn-helix domain A1D48_RS12890 PF00455 DeoR C terminal sensor domain A1D48_RS12895 PF05433 Glycine zipper 2TM domain A1D48_RS12900 PF01253 Translation initiation factor SUI1 A1D48_RS12905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A1D48_RS12910 PF18073 Rubredoxin metal binding domain A1D48_RS12915 PF06305 Lipopolysaccharide assembly protein A domain A1D48_RS12925 PF01569 PAP2 superfamily A1D48_RS12930 PF00925 GTP cyclohydrolase II A1D48_RS12935 PF00330 Aconitase family (aconitate hydratase) A1D48_RS12935 PF00694 Aconitase C-terminal domain A1D48_RS12950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS12950 PF03466 LysR substrate binding domain A1D48_RS12960 PF01396 Topoisomerase DNA binding C4 zinc finger A1D48_RS12960 PF01751 Toprim domain A1D48_RS12960 PF08272 Topoisomerase I zinc-ribbon-like A1D48_RS12960 PF01131 DNA topoisomerase A1D48_RS12970 PF10692 Protein of unknown function (DUF2498) A1D48_RS12975 PF01343 Peptidase family S49 A1D48_RS12975 PF08496 Peptidase family S49 N-terminal A1D48_RS12980 PF00106 short chain dehydrogenase A1D48_RS12985 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP A1D48_RS12990 PF00849 RNA pseudouridylate synthase A1D48_RS12990 PF01479 S4 domain A1D48_RS12995 PF01300 Telomere recombination A1D48_RS13000 PF02811 PHP domain A1D48_RS13005 PF08255 Trp-operon Leader Peptide A1D48_RS13010 PF00425 chorismate binding enzyme A1D48_RS13010 PF04715 Anthranilate synthase component I, N terminal region A1D48_RS13015 PF00117 Glutamine amidotransferase class-I A1D48_RS13015 PF02885 Glycosyl transferase family, helical bundle domain A1D48_RS13015 PF00591 Glycosyl transferase family, a/b domain A1D48_RS13020 PF00218 Indole-3-glycerol phosphate synthase A1D48_RS13020 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A1D48_RS13025 PF00291 Pyridoxal-phosphate dependent enzyme A1D48_RS13030 PF00290 Tryptophan synthase alpha chain A1D48_RS13035 PF10685 Stress-induced bacterial acidophilic repeat motif A1D48_RS13040 PF05974 Domain of unknown function (DUF892) A1D48_RS13045 PF05974 Domain of unknown function (DUF892) A1D48_RS13050 PF05067 Manganese containing catalase A1D48_RS13055 PF03922 OmpW family A1D48_RS13060 PF03692 Putative zinc- or iron-chelating domain A1D48_RS13070 PF04279 Intracellular septation protein A A1D48_RS13075 PF03061 Thioesterase superfamily A1D48_RS13080 PF03544 Gram-negative bacterial TonB protein C-terminal A1D48_RS13085 PF03795 YCII-related domain A1D48_RS13090 PF13091 PLD-like domain A1D48_RS13090 PF13396 Phospholipase_D-nuclease N-terminal A1D48_RS13095 PF04269 Protein of unknown function, DUF440 A1D48_RS13100 PF00027 Cyclic nucleotide-binding domain A1D48_RS13100 PF00520 Ion transport protein A1D48_RS13105 PF00005 ABC transporter A1D48_RS13105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A1D48_RS13110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A1D48_RS13110 PF00005 ABC transporter A1D48_RS13115 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS13115 PF12911 N-terminal TM domain of oligopeptide transport permease C A1D48_RS13120 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS13125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A1D48_RS13135 PF01914 MarC family integral membrane protein A1D48_RS13140 PF00171 Aldehyde dehydrogenase family A1D48_RS13140 PF00465 Iron-containing alcohol dehydrogenase A1D48_RS13145 PF00265 Thymidine kinase A1D48_RS13150 PF00816 H-NS histone family A1D48_RS13155 PF00483 Nucleotidyl transferase A1D48_RS13160 PF00072 Response regulator receiver domain A1D48_RS13165 PF01734 Patatin-like phospholipase A1D48_RS13170 PF02810 SEC-C motif A1D48_RS13175 PF00551 Formyl transferase A1D48_RS13175 PF01842 ACT domain A1D48_RS13220 PF02665 Nitrate reductase gamma subunit A1D48_RS13225 PF02613 Nitrate reductase delta subunit A1D48_RS13230 PF14711 Respiratory nitrate reductase beta C-terminal A1D48_RS13230 PF13247 4Fe-4S dicluster domain A1D48_RS13235 PF14710 Respiratory nitrate reductase alpha N-terminal A1D48_RS13235 PF01568 Molydopterin dinucleotide binding domain A1D48_RS13235 PF00384 Molybdopterin oxidoreductase A1D48_RS13240 PF07690 Major Facilitator Superfamily A1D48_RS13250 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term A1D48_RS13250 PF07730 Histidine kinase A1D48_RS13250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS13250 PF00672 HAMP domain A1D48_RS13255 PF00072 Response regulator receiver domain A1D48_RS13255 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS13260 PF11924 Inverse autotransporter, beta-domain A1D48_RS13265 PF02635 DsrE/DsrF-like family A1D48_RS13270 PF06150 ChaB A1D48_RS13275 PF01699 Sodium/calcium exchanger protein A1D48_RS13280 PF00793 DAHP synthetase I family A1D48_RS13285 PF13369 Transglutaminase-like superfamily A1D48_RS13290 PF04247 Invasion gene expression up-regulator, SirB A1D48_RS13295 PF17827 PrmC N-terminal domain A1D48_RS13295 PF13847 Methyltransferase domain A1D48_RS13300 PF03462 PCRF domain A1D48_RS13300 PF00472 RF-1 domain A1D48_RS13305 PF01488 Shikimate / quinate 5-dehydrogenase A1D48_RS13305 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A1D48_RS13305 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A1D48_RS13310 PF03550 Outer membrane lipoprotein LolB A1D48_RS13315 PF00288 GHMP kinases N terminal domain A1D48_RS13315 PF08544 GHMP kinases C terminal A1D48_RS13320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A1D48_RS13320 PF14572 Phosphoribosyl synthetase-associated domain A1D48_RS13325 PF01740 STAS domain A1D48_RS13325 PF00916 Sulfate permease family A1D48_RS13330 PF10762 Protein of unknown function (DUF2583) A1D48_RS13335 PF01195 Peptidyl-tRNA hydrolase A1D48_RS13340 PF06071 Protein of unknown function (DUF933) A1D48_RS13340 PF01926 50S ribosome-binding GTPase A1D48_RS13360 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal A1D48_RS13360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A1D48_RS13365 PF00374 Nickel-dependent hydrogenase A1D48_RS13370 PF01292 Prokaryotic cytochrome b561 A1D48_RS13375 PF01750 Hydrogenase maturation protease A1D48_RS13380 PF07449 Hydrogenase-1 expression protein HyaE A1D48_RS13385 PF04809 HupH hydrogenase expression protein, C-terminal conserved region A1D48_RS13390 PF01654 Cytochrome bd terminal oxidase subunit I A1D48_RS13395 PF02322 Cytochrome bd terminal oxidase subunit II A1D48_RS13400 PF08173 Membrane bound YbgT-like protein A1D48_RS13405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A1D48_RS13405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A1D48_RS13410 PF01204 Trehalase A1D48_RS13415 PF04226 Transglycosylase associated protein A1D48_RS13420 PF07238 PilZ domain A1D48_RS13420 PF07317 Flagellar regulator YcgR A1D48_RS13425 PF01464 Transglycosylase SLT domain A1D48_RS13430 PF02016 LD-carboxypeptidase N-terminal domain A1D48_RS13430 PF17676 LD-carboxypeptidase C-terminal domain A1D48_RS13435 PF03471 Transporter associated domain A1D48_RS13435 PF02080 TrkA-C domain A1D48_RS13435 PF00999 Sodium/hydrogen exchanger family A1D48_RS13440 PF01168 Alanine racemase, N-terminal domain A1D48_RS13440 PF00842 Alanine racemase, C-terminal domain A1D48_RS13445 PF01266 FAD dependent oxidoreductase A1D48_RS13450 PF04293 SpoVR like protein A1D48_RS13455 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS13455 PF07840 FadR C-terminal domain A1D48_RS13460 PF06450 Bacterial Na+/H+ antiporter B (NhaB) A1D48_RS13465 PF02600 Disulfide bond formation protein DsbB A1D48_RS13475 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system A1D48_RS13485 PF03692 Putative zinc- or iron-chelating domain A1D48_RS13490 PF01557 Fumarylacetoacetate (FAA) hydrolase family A1D48_RS13495 PF05166 YcgL domain A1D48_RS13500 PF05209 Septum formation inhibitor MinC, N-terminal domain A1D48_RS13500 PF03775 Septum formation inhibitor MinC, C-terminal domain A1D48_RS13505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A1D48_RS13510 PF03776 Septum formation topological specificity factor MinE A1D48_RS13515 PF00570 HRDC domain A1D48_RS13515 PF01612 3'-5' exonuclease A1D48_RS13520 PF00501 AMP-binding enzyme A1D48_RS13520 PF13193 AMP-binding enzyme C-terminal domain A1D48_RS13530 PF03843 Outer membrane lipoprotein Slp family A1D48_RS13535 PF00814 Glycoprotease family A1D48_RS13540 PF13307 Helicase C-terminal domain A1D48_RS13540 PF04851 Type III restriction enzyme, res subunit A1D48_RS13545 PF01042 Endoribonuclease L-PSP A1D48_RS13550 PF03701 Uncharacterised protein family (UPF0181) A1D48_RS13555 PF04715 Anthranilate synthase component I, N terminal region A1D48_RS13555 PF00425 chorismate binding enzyme A1D48_RS13560 PF00293 NUDIX domain A1D48_RS13565 PF03313 Serine dehydratase alpha chain A1D48_RS13565 PF03315 Serine dehydratase beta chain A1D48_RS13570 PF12792 CSS motif domain associated with EAL A1D48_RS13570 PF00563 EAL domain A1D48_RS13575 PF03471 Transporter associated domain A1D48_RS13575 PF03741 Integral membrane protein TerC family A1D48_RS13585 PF03610 PTS system fructose IIA component A1D48_RS13585 PF03830 PTS system sorbose subfamily IIB component A1D48_RS13590 PF03609 PTS system sorbose-specific iic component A1D48_RS13595 PF03613 PTS system mannose/fructose/sorbose family IID component A1D48_RS13600 PF06173 Protein of unknown function (DUF986) A1D48_RS13610 PF02659 Putative manganese efflux pump A1D48_RS13615 PF13847 Methyltransferase domain A1D48_RS13620 PF03717 Penicillin-binding Protein dimerisation domain A1D48_RS13620 PF00905 Penicillin binding protein transpeptidase domain A1D48_RS13625 PF00313 'Cold-shock' DNA-binding domain A1D48_RS13630 PF10736 Protein of unknown function (DUF2627) A1D48_RS13635 PF13974 YebO-like protein A1D48_RS13640 PF13998 MgrB protein A1D48_RS13645 PF13996 YobH-like protein A1D48_RS13650 PF01614 Bacterial transcriptional regulator A1D48_RS13650 PF09339 IclR helix-turn-helix domain A1D48_RS13655 PF07690 Major Facilitator Superfamily A1D48_RS13660 PF01435 Peptidase family M48 A1D48_RS13665 PF17804 Tail specific protease N-terminal domain A1D48_RS13665 PF00595 PDZ domain A1D48_RS13665 PF11818 C-terminal domain of tail specific protease (DUF3340) A1D48_RS13665 PF03572 Peptidase family S41 A1D48_RS13675 PF13185 GAF domain A1D48_RS13680 PF04403 Paraquat-inducible protein A A1D48_RS13685 PF02470 MlaD protein A1D48_RS13690 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF A1D48_RS13690 PF01189 16S rRNA methyltransferase RsmB/F A1D48_RS13690 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF A1D48_RS13695 PF07351 Protein of unknown function (DUF1480) A1D48_RS13700 PF07358 Protein of unknown function (DUF1482) A1D48_RS13705 PF00149 Calcineurin-like phosphoesterase A1D48_RS13720 PF05364 Salmonella type III secretion SopE effector N-terminus A1D48_RS13720 PF07487 SopE GEF domain A1D48_RS13725 PF07166 Protein of unknown function (DUF1398) A1D48_RS13755 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system A1D48_RS13760 PF01381 Helix-turn-helix A1D48_RS13765 PF00534 Glycosyl transferases group 1 A1D48_RS13770 PF00583 Acetyltransferase (GNAT) family A1D48_RS13780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A1D48_RS13780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A1D48_RS13780 PF03129 Anticodon binding domain A1D48_RS13780 PF02824 TGS domain A1D48_RS13795 PF14496 C-terminal novel E3 ligase, LRR-interacting A1D48_RS13795 PF12468 Type III secretion system leucine rich repeat protein A1D48_RS13815 PF10709 Protein of unknown function (DUF2511) A1D48_RS13820 PF05425 Copper resistance protein D A1D48_RS13825 PF04234 CopC domain A1D48_RS13830 PF06440 DNA polymerase III, theta subunit A1D48_RS13835 PF00795 Carbon-nitrogen hydrolase A1D48_RS13840 PF00929 Exonuclease A1D48_RS13845 PF00326 Prolyl oligopeptidase family A1D48_RS13845 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A1D48_RS13850 PF04391 Protein of unknown function (DUF533) A1D48_RS13855 PF13995 YebF-like protein A1D48_RS13860 PF07130 YebG protein A1D48_RS13865 PF02222 ATP-grasp domain A1D48_RS13870 PF01081 KDPG and KHG aldolase A1D48_RS13875 PF00920 Dehydratase family A1D48_RS13880 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A1D48_RS13880 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A1D48_RS13890 PF01418 Helix-turn-helix domain, rpiR family A1D48_RS13890 PF01380 SIS domain A1D48_RS13895 PF02887 Pyruvate kinase, alpha/beta domain A1D48_RS13895 PF00224 Pyruvate kinase, barrel domain A1D48_RS13900 PF03279 Bacterial lipid A biosynthesis acyltransferase A1D48_RS13910 PF08525 Opacity-associated protein A N-terminal motif A1D48_RS13910 PF01476 LysM domain A1D48_RS13910 PF01551 Peptidase family M23 A1D48_RS13915 PF01297 Zinc-uptake complex component A periplasmic A1D48_RS13920 PF00005 ABC transporter A1D48_RS13925 PF00950 ABC 3 transport family A1D48_RS13930 PF17864 RuvB AAA lid domain A1D48_RS13930 PF05496 Holliday junction DNA helicase RuvB P-loop domain A1D48_RS13930 PF05491 RuvB C-terminal winged helix domain A1D48_RS13935 PF07499 RuvA, C-terminal domain A1D48_RS13935 PF01330 RuvA N terminal domain A1D48_RS13945 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family A1D48_RS13950 PF02075 Crossover junction endodeoxyribonuclease RuvC A1D48_RS13955 PF01709 Transcriptional regulator A1D48_RS13960 PF00293 NUDIX domain A1D48_RS13965 PF00152 tRNA synthetases class II (D, K and N) A1D48_RS13965 PF01336 OB-fold nucleic acid binding domain A1D48_RS13965 PF02938 GAD domain A1D48_RS13970 PF00857 Isochorismatase family A1D48_RS13975 PF01904 Protein of unknown function DUF72 A1D48_RS13980 PF01124 MAPEG family A1D48_RS13985 PF13649 Methyltransferase domain A1D48_RS13990 PF08003 Protein of unknown function (DUF1698) A1D48_RS14000 PF03932 CutC family A1D48_RS14005 PF06185 YecM protein A1D48_RS14010 PF00750 tRNA synthetases class I (R) A1D48_RS14010 PF05746 DALR anticodon binding domain A1D48_RS14010 PF03485 Arginyl tRNA synthetase N terminal domain A1D48_RS14015 PF03717 Penicillin-binding Protein dimerisation domain A1D48_RS14015 PF00905 Penicillin binding protein transpeptidase domain A1D48_RS14020 PF07470 Glycosyl Hydrolase Family 88 A1D48_RS14025 PF06366 Flagellar protein FlhE A1D48_RS14030 PF00771 FHIPEP family A1D48_RS14035 PF01312 FlhB HrpN YscU SpaS Family A1D48_RS14040 PF04344 Chemotaxis phosphatase, CheZ A1D48_RS14045 PF00072 Response regulator receiver domain A1D48_RS14050 PF00072 Response regulator receiver domain A1D48_RS14050 PF01339 CheB methylesterase A1D48_RS14055 PF03705 CheR methyltransferase, all-alpha domain A1D48_RS14055 PF01739 CheR methyltransferase, SAM binding domain A1D48_RS14060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A1D48_RS14060 PF00672 HAMP domain A1D48_RS14060 PF02203 Tar ligand binding domain homologue A1D48_RS14065 PF01584 CheW-like domain A1D48_RS14070 PF09078 CheY binding A1D48_RS14070 PF02895 Signal transducing histidine kinase, homodimeric domain A1D48_RS14070 PF01584 CheW-like domain A1D48_RS14070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS14070 PF01627 Hpt domain A1D48_RS14075 PF13677 Membrane MotB of proton-channel complex MotA/MotB A1D48_RS14075 PF00691 OmpA family A1D48_RS14080 PF01618 MotA/TolQ/ExbB proton channel family A1D48_RS14085 PF05280 Flagellar transcriptional activator (FlhC) A1D48_RS14090 PF05247 Flagellar transcriptional activator (FlhD) A1D48_RS14100 PF00582 Universal stress protein family A1D48_RS14105 PF00982 Glycosyltransferase family 20 A1D48_RS14110 PF02358 Trehalose-phosphatase A1D48_RS14125 PF00210 Ferritin-like domain A1D48_RS14135 PF13992 YecR-like lipoprotein A1D48_RS14140 PF00210 Ferritin-like domain A1D48_RS14145 PF10678 Protein of unknown function (DUF2492) A1D48_RS14150 PF03222 Tryptophan/tyrosine permease family A1D48_RS14155 PF03695 Uncharacterised protein family (UPF0149) A1D48_RS14155 PF02810 SEC-C motif A1D48_RS14190 PF01066 CDP-alcohol phosphatidyltransferase A1D48_RS14195 PF01541 GIY-YIG catalytic domain A1D48_RS14195 PF08459 UvrC Helix-hairpin-helix N-terminal A1D48_RS14195 PF02151 UvrB/uvrC motif A1D48_RS14200 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS14200 PF00072 Response regulator receiver domain A1D48_RS14210 PF10769 Protein of unknown function (DUF2594) A1D48_RS14215 PF03472 Autoinducer binding domain A1D48_RS14215 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS14220 PF00005 ABC transporter A1D48_RS14225 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS14230 PF00291 Pyridoxal-phosphate dependent enzyme A1D48_RS14235 PF00497 Bacterial extracellular solute-binding proteins, family 3 A1D48_RS14240 PF02899 Phage integrase, N-terminal SAM-like domain A1D48_RS14245 PF04545 Sigma-70, region 4 A1D48_RS14245 PF04539 Sigma-70 region 3 A1D48_RS14245 PF04542 Sigma-70 region 2 A1D48_RS14255 PF00669 Bacterial flagellin N-terminal helical region A1D48_RS14255 PF00700 Bacterial flagellin C-terminal helical region A1D48_RS14265 PF07196 Flagellin hook IN motif A1D48_RS14265 PF07195 Flagellar hook-associated protein 2 C-terminus A1D48_RS14265 PF02465 Flagellar hook-associated protein 2 N-terminus A1D48_RS14270 PF02561 Flagellar protein FliS A1D48_RS14275 PF05400 Flagellar protein FliT A1D48_RS14280 PF00128 Alpha amylase, catalytic domain A1D48_RS14280 PF02806 Alpha amylase, C-terminal all-beta domain A1D48_RS14285 PF13987 YedD-like protein A1D48_RS14290 PF04143 Sulphur transport A1D48_RS14295 PF01206 Sulfurtransferase TusA A1D48_RS14305 PF02049 Flagellar hook-basal body complex protein FliE A1D48_RS14310 PF08345 Flagellar M-ring protein C-terminal A1D48_RS14310 PF01514 Secretory protein of YscJ/FliF family A1D48_RS14315 PF01706 FliG C-terminal domain A1D48_RS14315 PF14841 FliG middle domain A1D48_RS14315 PF14842 FliG N-terminal domain A1D48_RS14320 PF02108 Flagellar assembly protein FliH A1D48_RS14325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A1D48_RS14325 PF18269 T3SS EscN ATPase C-terminal domain A1D48_RS14330 PF02050 Flagellar FliJ protein A1D48_RS14335 PF02120 Flagellar hook-length control protein FliK A1D48_RS14340 PF03748 Flagellar basal body-associated protein FliL A1D48_RS14345 PF02154 Flagellar motor switch protein FliM A1D48_RS14345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A1D48_RS14350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A1D48_RS14350 PF16973 Flagellar motor switch protein FliN N-terminal A1D48_RS14355 PF04347 Flagellar biosynthesis protein, FliO A1D48_RS14360 PF00813 FliP family A1D48_RS14365 PF01313 Bacterial export proteins, family 3 A1D48_RS14370 PF01311 Bacterial export proteins, family 1 A1D48_RS14375 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS14380 PF10781 Dextransucrase DSRB A1D48_RS14385 PF10733 Protein of unknown function (DUF2525) A1D48_RS14395 PF17151 Periplasmic sensor domain A1D48_RS14395 PF00990 Diguanylate cyclase, GGDEF domain A1D48_RS14400 PF09926 Uncharacterized small protein (DUF2158) A1D48_RS14405 PF05661 Protein of unknown function (DUF808) A1D48_RS14410 PF00892 EamA-like transporter family A1D48_RS14415 PF03852 DNA mismatch endonuclease Vsr A1D48_RS14420 PF00145 C-5 cytosine-specific DNA methylase A1D48_RS14420 PF18284 DNA methylase N-terminal domain A1D48_RS14425 PF01966 HD domain A1D48_RS14435 PF00267 Gram-negative porin A1D48_RS14445 PF00313 'Cold-shock' DNA-binding domain A1D48_RS14480 PF02562 PhoH-like protein A1D48_RS14490 PF00474 Sodium:solute symporter family A1D48_RS14500 PF14850 DNA-binding domain of Proline dehydrogenase A1D48_RS14500 PF01619 Proline dehydrogenase A1D48_RS14500 PF00171 Aldehyde dehydrogenase family A1D48_RS14500 PF18327 Proline utilization A proline dehydrogenase N-terminal domain A1D48_RS14510 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS14510 PF08362 YcdC-like protein, C-terminal region A1D48_RS14515 PF10685 Stress-induced bacterial acidophilic repeat motif A1D48_RS14520 PF03358 NADPH-dependent FMN reductase A1D48_RS14525 PF13993 YccJ-like protein A1D48_RS14530 PF00328 Histidine phosphatase superfamily (branch 2) A1D48_RS14535 PF00578 AhpC/TSA family A1D48_RS14540 PF13462 Thioredoxin A1D48_RS14540 PF06965 Na+/H+ antiporter 1 A1D48_RS14545 PF02683 Cytochrome C biogenesis protein transmembrane region A1D48_RS14545 PF11412 Disulphide bond corrector protein DsbC A1D48_RS14545 PF13098 Thioredoxin-like domain A1D48_RS14560 PF01556 DnaJ C terminal domain A1D48_RS14560 PF00226 DnaJ domain A1D48_RS14580 PF12706 Beta-lactamase superfamily domain A1D48_RS14590 PF07690 Major Facilitator Superfamily A1D48_RS14595 PF03328 HpcH/HpaI aldolase/citrate lyase family A1D48_RS14600 PF01557 Fumarylacetoacetate (FAA) hydrolase family A1D48_RS14610 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase A1D48_RS14615 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase A1D48_RS14620 PF00171 Aldehyde dehydrogenase family A1D48_RS14625 PF01557 Fumarylacetoacetate (FAA) hydrolase family A1D48_RS14630 PF01047 MarR family A1D48_RS14635 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal A1D48_RS14635 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal A1D48_RS14640 PF01613 Flavin reductase like domain A1D48_RS14655 PF00576 HIUase/Transthyretin family A1D48_RS14660 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS14660 PF00072 Response regulator receiver domain A1D48_RS14665 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS14665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS14670 PF03577 Peptidase family C69 A1D48_RS14680 PF13132 Domain of unknown function (DUF3950) A1D48_RS14685 PF05925 Enterobacterial virulence protein IpgD A1D48_RS14690 PF07824 Type III secretion chaperone domain A1D48_RS14705 PF00805 Pentapeptide repeats (8 copies) A1D48_RS14720 PF01027 Inhibitor of apoptosis-promoting Bax1 A1D48_RS14725 PF04358 DsrC like protein A1D48_RS14730 PF00708 Acylphosphatase A1D48_RS14735 PF12833 Helix-turn-helix domain A1D48_RS14740 PF01161 Phosphatidylethanolamine-binding protein A1D48_RS14745 PF10672 S-adenosylmethionine-dependent methyltransferase A1D48_RS14745 PF17785 PUA-like domain A1D48_RS14750 PF08755 Hemimethylated DNA-binding protein YccV like A1D48_RS14755 PF13380 CoA binding domain A1D48_RS14760 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) A1D48_RS14765 PF02142 MGS-like domain A1D48_RS14770 PF13361 UvrD-like helicase C-terminal domain A1D48_RS14770 PF00580 UvrD/REP helicase N-terminal domain A1D48_RS14770 PF12462 DNA helicase IV / RNA helicase N terminal A1D48_RS14775 PF03733 Inner membrane component domain A1D48_RS14780 PF12805 FUSC-like inner membrane protein yccS A1D48_RS14785 PF04993 TfoX N-terminal domain A1D48_RS14785 PF04994 TfoX C-terminal domain A1D48_RS14790 PF03846 Cell division inhibitor SulA A1D48_RS14795 PF01389 OmpA-like transmembrane domain A1D48_RS14795 PF00691 OmpA family A1D48_RS14800 PF17414 MatP C-terminal ribbon-helix-helix domain A1D48_RS14800 PF06303 MatP N-terminal domain A1D48_RS14805 PF13654 AAA domain A1D48_RS14805 PF05362 Lon protease (S16) C-terminal proteolytic domain A1D48_RS14810 PF07977 FabA-like domain A1D48_RS14815 PF04957 Ribosome modulation factor A1D48_RS14820 PF03886 ABC-type transport auxiliary lipoprotein component A1D48_RS14825 PF02470 MlaD protein A1D48_RS14830 PF04403 Paraquat-inducible protein A A1D48_RS14835 PF00005 ABC transporter A1D48_RS14835 PF12848 ABC transporter A1D48_RS14835 PF16326 ABC transporter C-terminal domain A1D48_RS14840 PF02926 THUMP domain A1D48_RS14840 PF01170 Putative RNA methylase family UPF0020 A1D48_RS14840 PF10672 S-adenosylmethionine-dependent methyltransferase A1D48_RS14845 PF03473 MOSC domain A1D48_RS14845 PF03476 MOSC N-terminal beta barrel domain A1D48_RS14845 PF00111 2Fe-2S iron-sulfur cluster binding domain A1D48_RS14850 PF07126 Cell-division protein ZapC A1D48_RS14855 PF01180 Dihydroorotate dehydrogenase A1D48_RS14860 PF17432 Domain of unknown function (DUF3458_C) ARM repeats A1D48_RS14860 PF01433 Peptidase family M1 domain A1D48_RS14860 PF11940 Domain of unknown function (DUF3458) Ig-like fold A1D48_RS14865 PF06183 DinI-like family A1D48_RS15030 PF03245 Bacteriophage Rz lysis protein A1D48_RS15035 PF00959 Phage lysozyme A1D48_RS15045 PF03589 Antitermination protein A1D48_RS15075 PF06183 DinI-like family A1D48_RS15115 PF06992 Replication protein P A1D48_RS15160 PF02086 D12 class N6 adenine-specific DNA methyltransferase A1D48_RS15175 PF00589 Phage integrase family A1D48_RS15175 PF12167 Arm DNA-binding domain A1D48_RS15180 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain A1D48_RS15180 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family A1D48_RS15185 PF01235 Sodium:alanine symporter family A1D48_RS15190 PF00291 Pyridoxal-phosphate dependent enzyme A1D48_RS15200 PF13404 AsnC-type helix-turn-helix domain A1D48_RS15200 PF01037 Lrp/AsnC ligand binding domain A1D48_RS15205 PF01336 OB-fold nucleic acid binding domain A1D48_RS15205 PF00152 tRNA synthetases class II (D, K and N) A1D48_RS15210 PF00267 Gram-negative porin A1D48_RS15215 PF00155 Aminotransferase class I and II A1D48_RS15220 PF00753 Metallo-beta-lactamase superfamily A1D48_RS15225 PF05951 Bacterial protein of unknown function (DUF882) A1D48_RS15235 PF01471 Putative peptidoglycan binding domain A1D48_RS15235 PF03734 L,D-transpeptidase catalytic domain A1D48_RS15240 PF04310 MukB N-terminal A1D48_RS15240 PF16330 MukB hinge domain A1D48_RS15245 PF04288 MukE-like family A1D48_RS15250 PF17192 MukF middle domain A1D48_RS15250 PF03882 MukF winged-helix domain A1D48_RS15250 PF17193 MukF C-terminal domain A1D48_RS15255 PF13847 Methyltransferase domain A1D48_RS15260 PF02698 DUF218 domain A1D48_RS15265 PF01636 Phosphotransferase enzyme family A1D48_RS15270 PF02348 Cytidylyltransferase A1D48_RS15275 PF03966 Trm112p-like protein A1D48_RS15280 PF06224 Winged helix DNA-binding domain A1D48_RS15285 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A1D48_RS15290 PF00664 ABC transporter transmembrane region A1D48_RS15290 PF00005 ABC transporter A1D48_RS15295 PF03772 Competence protein A1D48_RS15295 PF00753 Metallo-beta-lactamase superfamily A1D48_RS15300 PF00216 Bacterial DNA-binding protein A1D48_RS15305 PF00575 S1 RNA binding domain A1D48_RS15310 PF02224 Cytidylate kinase A1D48_RS15320 PF01435 Peptidase family M48 A1D48_RS15325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A1D48_RS15330 PF00266 Aminotransferase class-V A1D48_RS15335 PF04239 Protein of unknown function (DUF421) A1D48_RS15340 PF18381 YcaO cyclodehydratase C-terminal domain A1D48_RS15340 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding A1D48_RS15345 PF01226 Formate/nitrite transporter A1D48_RS15350 PF02901 Pyruvate formate lyase-like A1D48_RS15350 PF01228 Glycine radical A1D48_RS15355 PF11047 Salmonella outer protein D A1D48_RS15365 PF04055 Radical SAM superfamily A1D48_RS15370 PF13520 Amino acid permease A1D48_RS15375 PF07690 Major Facilitator Superfamily A1D48_RS15380 PF04976 DMSO reductase anchor subunit (DmsC) A1D48_RS15385 PF12800 4Fe-4S binding domain A1D48_RS15385 PF13247 4Fe-4S dicluster domain A1D48_RS15390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS15390 PF00384 Molybdopterin oxidoreductase A1D48_RS15390 PF01568 Molydopterin dinucleotide binding domain A1D48_RS15395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A1D48_RS15395 PF02403 Seryl-tRNA synthetase N-terminal domain A1D48_RS15400 PF00004 ATPase family associated with various cellular activities (AAA) A1D48_RS15400 PF16193 AAA C-terminal domain A1D48_RS15400 PF12002 MgsA AAA+ ATPase C terminal A1D48_RS15405 PF03548 Outer membrane lipoprotein carrier protein LolA A1D48_RS15410 PF09397 Ftsk gamma domain A1D48_RS15410 PF01580 FtsK/SpoIIIE family A1D48_RS15410 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A1D48_RS15410 PF17854 FtsK alpha domain A1D48_RS15415 PF01037 Lrp/AsnC ligand binding domain A1D48_RS15425 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS15430 PF00664 ABC transporter transmembrane region A1D48_RS15430 PF00005 ABC transporter A1D48_RS15435 PF00664 ABC transporter transmembrane region A1D48_RS15435 PF00005 ABC transporter A1D48_RS15440 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A1D48_RS15450 PF01176 Translation initiation factor 1A / IF-1 A1D48_RS15455 PF03466 LysR substrate binding domain A1D48_RS15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS15460 PF02678 Pirin A1D48_RS15460 PF05726 Pirin C-terminal cupin domain A1D48_RS15465 PF00857 Isochorismatase family A1D48_RS15495 PF17871 AAA lid domain A1D48_RS15495 PF07724 AAA domain (Cdc48 subfamily) A1D48_RS15495 PF10431 C-terminal, D2-small domain, of ClpB protein A1D48_RS15495 PF00004 ATPase family associated with various cellular activities (AAA) A1D48_RS15495 PF02861 Clp amino terminal domain, pathogenicity island component A1D48_RS15500 PF02617 ATP-dependent Clp protease adaptor protein ClpS A1D48_RS15505 PF00313 'Cold-shock' DNA-binding domain A1D48_RS15510 PF00005 ABC transporter A1D48_RS15510 PF02687 FtsX-like permease family A1D48_RS15510 PF12704 MacB-like periplasmic core domain A1D48_RS15515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A1D48_RS15520 PF04393 Protein of unknown function (DUF535) A1D48_RS15525 PF11398 Protein of unknown function (DUF2813) A1D48_RS15535 PF03956 Lysine exporter LysO A1D48_RS15540 PF03063 Prismane/CO dehydrogenase family A1D48_RS15545 PF00970 Oxidoreductase FAD-binding domain A1D48_RS15545 PF00111 2Fe-2S iron-sulfur cluster binding domain A1D48_RS15545 PF00175 Oxidoreductase NAD-binding domain A1D48_RS15550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A1D48_RS15550 PF00205 Thiamine pyrophosphate enzyme, central domain A1D48_RS15550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A1D48_RS15555 PF01212 Beta-eliminating lyase A1D48_RS15560 PF13460 NAD(P)H-binding A1D48_RS15560 PF11066 Protein of unknown function (DUF2867) A1D48_RS15565 PF01370 NAD dependent epimerase/dehydratase family A1D48_RS15570 PF01510 N-acetylmuramoyl-L-alanine amidase A1D48_RS15575 PF01906 Putative heavy-metal-binding A1D48_RS15580 PF12883 Protein of unknown function (DUF3828) A1D48_RS15585 PF00005 ABC transporter A1D48_RS15590 PF00497 Bacterial extracellular solute-binding proteins, family 3 A1D48_RS15595 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS15600 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS15605 PF00497 Bacterial extracellular solute-binding proteins, family 3 A1D48_RS15625 PF03611 PTS system sugar-specific permease component A1D48_RS15630 PF05958 tRNA (Uracil-5-)-methyltransferase A1D48_RS15635 PF10767 Protein of unknown function (DUF2593) A1D48_RS15640 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS15645 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS15650 PF08402 TOBE domain A1D48_RS15650 PF00005 ABC transporter A1D48_RS15655 PF13416 Bacterial extracellular solute-binding protein A1D48_RS15660 PF10722 Putative bacterial sensory transduction regulator A1D48_RS15665 PF08443 RimK-like ATP-grasp domain A1D48_RS15665 PF18030 RimK PreATP-grasp domain A1D48_RS15670 PF00881 Nitroreductase family A1D48_RS15675 PF07214 Protein of unknown function (DUF1418) A1D48_RS15680 PF00462 Glutaredoxin A1D48_RS15685 PF11045 Putative inner membrane protein of Enterobacteriaceae A1D48_RS15695 PF02080 TrkA-C domain A1D48_RS15695 PF06826 Predicted Permease Membrane Region A1D48_RS15705 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS15710 PF07690 Major Facilitator Superfamily A1D48_RS15720 PF07690 Major Facilitator Superfamily A1D48_RS15725 PF01569 PAP2 superfamily A1D48_RS15730 PF08220 DeoR-like helix-turn-helix domain A1D48_RS15730 PF00455 DeoR C terminal sensor domain A1D48_RS15735 PF00768 D-alanyl-D-alanine carboxypeptidase A1D48_RS15735 PF07943 Penicillin-binding protein 5, C-terminal domain A1D48_RS15740 PF13417 Glutathione S-transferase, N-terminal domain A1D48_RS15740 PF00043 Glutathione S-transferase, C-terminal domain A1D48_RS15745 PF07995 Glucose / Sorbosone dehydrogenase A1D48_RS15750 PF10799 Biofilm formation protein (YliH/bssR) A1D48_RS15755 PF00919 Uncharacterized protein family UPF0004 A1D48_RS15755 PF04055 Radical SAM superfamily A1D48_RS15755 PF18693 TRAM domain A1D48_RS15760 PF12911 N-terminal TM domain of oligopeptide transport permease C A1D48_RS15760 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS15765 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS15770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A1D48_RS15775 PF00005 ABC transporter A1D48_RS15775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A1D48_RS15780 PF01112 Asparaginase A1D48_RS15785 PF03454 MoeA C-terminal region (domain IV) A1D48_RS15785 PF03453 MoeA N-terminal region (domain I and II) A1D48_RS15785 PF00994 Probable molybdopterin binding domain A1D48_RS15790 PF00899 ThiF family A1D48_RS15795 PF04055 Radical SAM superfamily A1D48_RS15800 PF01228 Glycine radical A1D48_RS15800 PF02901 Pyruvate formate lyase-like A1D48_RS15810 PF07350 Protein of unknown function (DUF1479) A1D48_RS15830 PF12848 ABC transporter A1D48_RS15830 PF00005 ABC transporter A1D48_RS15835 PF03734 L,D-transpeptidase catalytic domain A1D48_RS15835 PF17969 L,D-transpeptidase C-terminal domain A1D48_RS15840 PF03600 Citrate transporter A1D48_RS15845 PF01325 Iron dependent repressor, N-terminal DNA binding domain A1D48_RS15845 PF02742 Iron dependent repressor, metal binding and dimerisation domain A1D48_RS15855 PF00884 Sulfatase A1D48_RS15860 PF13505 Outer membrane protein beta-barrel domain A1D48_RS15865 PF00892 EamA-like transporter family A1D48_RS15870 PF00210 Ferritin-like domain A1D48_RS15875 PF00497 Bacterial extracellular solute-binding proteins, family 3 A1D48_RS15880 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS15885 PF00005 ABC transporter A1D48_RS15890 PF00924 Mechanosensitive ion channel A1D48_RS15895 PF05971 RNA methyltransferase A1D48_RS15900 PF01258 Prokaryotic dksA/traR C4-type zinc finger A1D48_RS15905 PF07338 Protein of unknown function (DUF1471) A1D48_RS15910 PF02885 Glycosyl transferase family, helical bundle domain A1D48_RS15915 PF06733 DEAD_2 A1D48_RS15915 PF13307 Helicase C-terminal domain A1D48_RS15920 PF00271 Helicase conserved C-terminal domain A1D48_RS15920 PF00270 DEAD/DEAH box helicase A1D48_RS15925 PF00465 Iron-containing alcohol dehydrogenase A1D48_RS15925 PF00171 Aldehyde dehydrogenase family A1D48_RS15930 PF02779 Transketolase, pyrimidine binding domain A1D48_RS15930 PF02780 Transketolase, C-terminal domain A1D48_RS15935 PF00456 Transketolase, thiamine diphosphate binding domain A1D48_RS15945 PF07690 Major Facilitator Superfamily A1D48_RS15950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS15950 PF03466 LysR substrate binding domain A1D48_RS15955 PF09209 Tetracyclin repressor-like, C-terminal domain A1D48_RS15955 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS15960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A1D48_RS15965 PF00005 ABC transporter A1D48_RS15980 PF11076 Putative inner membrane protein YbhQ A1D48_RS15985 PF03372 Endonuclease/Exonuclease/phosphatase family A1D48_RS15990 PF13091 PLD-like domain A1D48_RS15995 PF03706 Lysylphosphatidylglycerol synthase TM region A1D48_RS16015 PF01027 Inhibitor of apoptosis-promoting Bax1 A1D48_RS16020 PF02391 MoaE protein A1D48_RS16025 PF02597 ThiS family A1D48_RS16030 PF01967 MoaC family A1D48_RS16035 PF00994 Probable molybdopterin binding domain A1D48_RS16040 PF04055 Radical SAM superfamily A1D48_RS16040 PF06463 Molybdenum Cofactor Synthesis C A1D48_RS16045 PF01933 Uncharacterised protein family UPF0052 A1D48_RS16050 PF12468 Type III secretion system leucine rich repeat protein A1D48_RS16050 PF14496 C-terminal novel E3 ligase, LRR-interacting A1D48_RS16055 PF04851 Type III restriction enzyme, res subunit A1D48_RS16055 PF12344 Ultra-violet resistance protein B A1D48_RS16055 PF17757 UvrB interaction domain A1D48_RS16055 PF00271 Helicase conserved C-terminal domain A1D48_RS16055 PF02151 UvrB/uvrC motif A1D48_RS16070 PF08241 Methyltransferase domain A1D48_RS16075 PF00155 Aminotransferase class I and II A1D48_RS16080 PF04055 Radical SAM superfamily A1D48_RS16080 PF06968 Biotin and Thiamin Synthesis associated domain A1D48_RS16085 PF00202 Aminotransferase class-III A1D48_RS16090 PF01161 Phosphatidylethanolamine-binding protein A1D48_RS16095 PF00221 Aromatic amino acid lyase A1D48_RS16100 PF01175 Urocanase Rossmann-like domain A1D48_RS16100 PF17392 Urocanase C-terminal domain A1D48_RS16100 PF17391 Urocanase N-terminal domain A1D48_RS16105 PF07702 UTRA domain A1D48_RS16105 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS16110 PF00491 Arginase family A1D48_RS16115 PF01979 Amidohydrolase family A1D48_RS16120 PF01095 Pectinesterase A1D48_RS16125 PF10282 Lactonase, 7-bladed beta-propeller A1D48_RS16135 PF00005 ABC transporter A1D48_RS16135 PF03459 TOBE domain A1D48_RS16140 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS16150 PF10766 Multidrug efflux pump-associated protein AcrZ A1D48_RS16155 PF03459 TOBE domain A1D48_RS16155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS16160 PF00005 ABC transporter A1D48_RS16170 PF16363 GDP-mannose 4,6 dehydratase A1D48_RS16175 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain A1D48_RS16175 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain A1D48_RS16180 PF00288 GHMP kinases N terminal domain A1D48_RS16180 PF08544 GHMP kinases C terminal A1D48_RS16180 PF10509 Galactokinase galactose-binding signature A1D48_RS16185 PF01263 Aldose 1-epimerase A1D48_RS16195 PF00300 Histidine phosphatase superfamily (branch 1) A1D48_RS16200 PF00005 ABC transporter A1D48_RS16205 PF01032 FecCD transport family A1D48_RS16210 PF00793 DAHP synthetase I family A1D48_RS16215 PF13985 YbgS-like protein A1D48_RS16220 PF01545 Cation efflux family A1D48_RS16225 PF04973 Nicotinamide mononucleotide transporter A1D48_RS16230 PF02445 Quinolinate synthetase A protein A1D48_RS16265 PF13174 Tetratricopeptide repeat A1D48_RS16265 PF16331 TolA binding protein trimerisation A1D48_RS16270 PF00691 OmpA family A1D48_RS16275 PF04052 TolB amino-terminal domain A1D48_RS16275 PF07676 WD40-like Beta Propeller Repeat A1D48_RS16280 PF06519 TolA C-terminal A1D48_RS16285 PF02472 Biopolymer transport protein ExbD/TolR A1D48_RS16290 PF01618 MotA/TolQ/ExbB proton channel family A1D48_RS16295 PF03061 Thioesterase superfamily A1D48_RS16300 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) A1D48_RS16305 PF08173 Membrane bound YbgT-like protein A1D48_RS16310 PF02322 Cytochrome bd terminal oxidase subunit II A1D48_RS16315 PF01654 Cytochrome bd terminal oxidase subunit I A1D48_RS16325 PF00549 CoA-ligase A1D48_RS16325 PF02629 CoA binding domain A1D48_RS16330 PF08442 ATP-grasp domain A1D48_RS16330 PF00549 CoA-ligase A1D48_RS16335 PF00364 Biotin-requiring enzyme A1D48_RS16335 PF02817 e3 binding domain A1D48_RS16335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A1D48_RS16340 PF16870 2-oxoglutarate dehydrogenase C-terminal A1D48_RS16340 PF16078 2-oxoglutarate dehydrogenase N-terminus A1D48_RS16340 PF00676 Dehydrogenase E1 component A1D48_RS16340 PF02779 Transketolase, pyrimidine binding domain A1D48_RS16345 PF13085 2Fe-2S iron-sulfur cluster binding domain A1D48_RS16350 PF00890 FAD binding domain A1D48_RS16350 PF02910 Fumarate reductase flavoprotein C-term A1D48_RS16355 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A1D48_RS16360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A1D48_RS16375 PF00285 Citrate synthase, C-terminal domain A1D48_RS16380 PF05145 Transition state regulatory protein AbrB A1D48_RS16385 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A1D48_RS16385 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A1D48_RS16385 PF06827 Zinc finger found in FPG and IleRS A1D48_RS16405 PF17994 Galactofuranosyltransferase 2 N-terminal A1D48_RS16410 PF00005 ABC transporter A1D48_RS16415 PF01061 ABC-2 type transporter A1D48_RS16430 PF03275 UDP-galactopyranose mutase A1D48_RS16445 PF00589 Phage integrase family A1D48_RS16455 PF03746 LamB/YcsF family A1D48_RS16460 PF02626 Carboxyltransferase domain, subdomain A and B A1D48_RS16465 PF02682 Carboxyltransferase domain, subdomain C and D A1D48_RS16470 PF01784 NIF3 (NGG1p interacting factor 3) A1D48_RS16480 PF00854 POT family A1D48_RS16485 PF00875 DNA photolyase A1D48_RS16485 PF03441 FAD binding domain of DNA photolyase A1D48_RS16490 PF10725 Protein of unknown function (DUF2517) A1D48_RS16495 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) A1D48_RS16500 PF03814 Potassium-transporting ATPase A subunit A1D48_RS16510 PF02669 K+-transporting ATPase, c chain A1D48_RS16515 PF02702 Osmosensitive K+ channel His kinase sensor domain A1D48_RS16515 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS16515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS16515 PF13492 GAF domain A1D48_RS16515 PF13493 Domain of unknown function (DUF4118) A1D48_RS16520 PF00072 Response regulator receiver domain A1D48_RS16520 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS16525 PF10940 Protein of unknown function (DUF2618) A1D48_RS16530 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A1D48_RS16530 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A1D48_RS16530 PF01276 Orn/Lys/Arg decarboxylase, major domain A1D48_RS16535 PF13520 Amino acid permease A1D48_RS16545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A1D48_RS16545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A1D48_RS16545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A1D48_RS16545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A1D48_RS16550 PF17206 SeqA protein N-terminal domain A1D48_RS16550 PF03925 SeqA protein C-terminal domain A1D48_RS16555 PF12697 Alpha/beta hydrolase family A1D48_RS16560 PF01402 Ribbon-helix-helix protein, copG family A1D48_RS16565 PF00258 Flavodoxin A1D48_RS16570 PF01475 Ferric uptake regulator family A1D48_RS16575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS16575 PF03466 LysR substrate binding domain A1D48_RS16580 PF00890 FAD binding domain A1D48_RS16580 PF14537 Cytochrome c3 A1D48_RS16590 PF07690 Major Facilitator Superfamily A1D48_RS16595 PF13982 YbfN-like lipoprotein A1D48_RS16600 PF03573 outer membrane porin, OprD family A1D48_RS16610 PF00749 tRNA synthetases class I (E and Q), catalytic domain A1D48_RS16610 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A1D48_RS16615 PF02378 Phosphotransferase system, EIIC A1D48_RS16615 PF00367 phosphotransferase system, EIIB A1D48_RS16615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A1D48_RS16620 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A1D48_RS16625 PF01979 Amidohydrolase family A1D48_RS16630 PF00480 ROK family A1D48_RS16630 PF01047 MarR family A1D48_RS16635 PF13344 Haloacid dehalogenase-like hydrolase A1D48_RS16640 PF00733 Asparagine synthase A1D48_RS16640 PF13537 Glutamine amidotransferase domain A1D48_RS16685 PF01494 FAD binding domain A1D48_RS16690 PF04055 Radical SAM superfamily A1D48_RS16690 PF01938 TRAM domain A1D48_RS16690 PF00919 Uncharacterized protein family UPF0004 A1D48_RS16695 PF02562 PhoH-like protein A1D48_RS16700 PF02130 Uncharacterized protein family UPF0054 A1D48_RS16705 PF03471 Transporter associated domain A1D48_RS16705 PF00571 CBS domain A1D48_RS16710 PF00795 Carbon-nitrogen hydrolase A1D48_RS16715 PF00497 Bacterial extracellular solute-binding proteins, family 3 A1D48_RS16720 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS16725 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS16730 PF00005 ABC transporter A1D48_RS16735 PF01156 Inosine-uridine preferring nucleoside hydrolase A1D48_RS16745 PF00012 Hsp70 protein A1D48_RS16755 PF06889 Protein of unknown function (DUF1266) A1D48_RS16765 PF06889 Protein of unknown function (DUF1266) A1D48_RS16775 PF07295 Zinc-ribbon containing domain A1D48_RS16780 PF00158 Sigma-54 interaction domain A1D48_RS16780 PF00989 PAS fold A1D48_RS16780 PF02954 Bacterial regulatory protein, Fis family A1D48_RS16785 PF03812 2-keto-3-deoxygluconate permease A1D48_RS16790 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus A1D48_RS16800 PF08264 Anticodon-binding domain of tRNA A1D48_RS16800 PF00133 tRNA synthetases class I (I, L, M and V) A1D48_RS16800 PF13603 Leucyl-tRNA synthetase, Domain 2 A1D48_RS16805 PF04390 Lipopolysaccharide-assembly A1D48_RS16810 PF06144 DNA polymerase III, delta subunit A1D48_RS16810 PF14840 Processivity clamp loader gamma complex DNA pol III C-term A1D48_RS16815 PF01467 Cytidylyltransferase-like A1D48_RS16820 PF00155 Aminotransferase class I and II A1D48_RS16825 PF00300 Histidine phosphatase superfamily (branch 1) A1D48_RS16835 PF02590 Predicted SPOUT methyltransferase A1D48_RS16840 PF00905 Penicillin binding protein transpeptidase domain A1D48_RS16840 PF03717 Penicillin-binding Protein dimerisation domain A1D48_RS16845 PF01098 Cell cycle protein A1D48_RS16850 PF05036 Sporulation related domain A1D48_RS16850 PF03330 Lytic transglycolase A1D48_RS16855 PF00768 D-alanyl-D-alanine carboxypeptidase A1D48_RS16855 PF07943 Penicillin-binding protein 5, C-terminal domain A1D48_RS16860 PF04359 Protein of unknown function (DUF493) A1D48_RS16865 PF03099 Biotin/lipoate A/B protein ligase family A1D48_RS16870 PF03466 LysR substrate binding domain A1D48_RS16870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS16875 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family A1D48_RS16875 PF04055 Radical SAM superfamily A1D48_RS16880 PF02416 mttA/Hcf106 family A1D48_RS16885 PF00795 Carbon-nitrogen hydrolase A1D48_RS16890 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A1D48_RS16895 PF00313 'Cold-shock' DNA-binding domain A1D48_RS16900 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP A1D48_RS16910 PF03606 C4-dicarboxylate anaerobic carrier A1D48_RS16915 PF00072 Response regulator receiver domain A1D48_RS16915 PF12431 Transcriptional regulator A1D48_RS16920 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A1D48_RS16920 PF00989 PAS fold A1D48_RS16920 PF17203 Single cache domain 3 A1D48_RS16920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS16930 PF08218 Citrate lyase ligase C-terminal domain A1D48_RS16935 PF06857 Malonate decarboxylase delta subunit (MdcD) A1D48_RS16940 PF03328 HpcH/HpaI aldolase/citrate lyase family A1D48_RS16945 PF04223 Citrate lyase, alpha subunit (CitF) A1D48_RS16950 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase A1D48_RS16955 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase A1D48_RS16960 PF00939 Sodium:sulfate symporter transmembrane region A1D48_RS16965 PF00445 Ribonuclease T2 family A1D48_RS16975 PF14760 Rnk N-terminus A1D48_RS16975 PF01272 Transcription elongation factor, GreA/GreB, C-term A1D48_RS16980 PF00107 Zinc-binding dehydrogenase A1D48_RS16980 PF13823 Alcohol dehydrogenase GroES-associated A1D48_RS16980 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS16985 PF00582 Universal stress protein family A1D48_RS16995 PF13247 4Fe-4S dicluster domain A1D48_RS17000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS17000 PF01568 Molydopterin dinucleotide binding domain A1D48_RS17000 PF00384 Molybdopterin oxidoreductase A1D48_RS17010 PF13192 Thioredoxin domain A1D48_RS17010 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS17015 PF10417 C-terminal domain of 1-Cys peroxiredoxin A1D48_RS17015 PF00578 AhpC/TSA family A1D48_RS17020 PF13098 Thioredoxin-like domain A1D48_RS17030 PF03466 LysR substrate binding domain A1D48_RS17030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS17035 PF11922 Domain of unknown function (DUF3440) A1D48_RS17035 PF01507 Phosphoadenosine phosphosulfate reductase family A1D48_RS17040 PF02195 ParB-like nuclease domain A1D48_RS17045 PF00155 Aminotransferase class I and II A1D48_RS17050 PF00465 Iron-containing alcohol dehydrogenase A1D48_RS17055 PF04328 Selenoprotein, putative A1D48_RS17060 PF02554 Carbon starvation protein CstA A1D48_RS17060 PF13722 5TM C-terminal transporter carbon starvation CstA A1D48_RS17065 PF03061 Thioesterase superfamily A1D48_RS17075 PF00550 Phosphopantetheine attachment site A1D48_RS17075 PF00857 Isochorismatase family A1D48_RS17080 PF13193 AMP-binding enzyme C-terminal domain A1D48_RS17080 PF00501 AMP-binding enzyme A1D48_RS17085 PF00425 chorismate binding enzyme A1D48_RS17090 PF01497 Periplasmic binding protein A1D48_RS17095 PF05977 Transmembrane secretion effector A1D48_RS17100 PF01032 FecCD transport family A1D48_RS17105 PF01032 FecCD transport family A1D48_RS17110 PF00005 ABC transporter A1D48_RS17115 PF02706 Chain length determinant protein A1D48_RS17120 PF00975 Thioesterase domain A1D48_RS17120 PF00501 AMP-binding enzyme A1D48_RS17120 PF00550 Phosphopantetheine attachment site A1D48_RS17120 PF00668 Condensation domain A1D48_RS17120 PF13193 AMP-binding enzyme C-terminal domain A1D48_RS17125 PF03621 MbtH-like protein A1D48_RS17130 PF00756 Putative esterase A1D48_RS17130 PF11806 Domain of unknown function (DUF3327) A1D48_RS17135 PF00593 TonB dependent receptor A1D48_RS17135 PF07715 TonB-dependent Receptor Plug Domain A1D48_RS17140 PF01648 4'-phosphopantetheinyl transferase superfamily A1D48_RS17140 PF17837 4'-phosphopantetheinyl transferase N-terminal domain A1D48_RS17145 PF04107 Glutamate-cysteine ligase family 2(GCS2) A1D48_RS17150 PF06643 Protein of unknown function (DUF1158) A1D48_RS17155 PF12833 Helix-turn-helix domain A1D48_RS17160 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS17160 PF16295 Tetracyclin repressor-like, C-terminal domain A1D48_RS17165 PF04237 YjbR A1D48_RS17170 PF00881 Nitroreductase family A1D48_RS17180 PF03830 PTS system sorbose subfamily IIB component A1D48_RS17190 PF03613 PTS system mannose/fructose/sorbose family IID component A1D48_RS17200 PF01380 SIS domain A1D48_RS17205 PF00158 Sigma-54 interaction domain A1D48_RS17205 PF00874 PRD domain A1D48_RS17205 PF03610 PTS system fructose IIA component A1D48_RS17210 PF03797 Autotransporter beta-domain A1D48_RS17210 PF00657 GDSL-like Lipase/Acylhydrolase A1D48_RS17220 PF00924 Mechanosensitive ion channel A1D48_RS17225 PF00324 Amino acid permease A1D48_RS17235 PF04224 Protein of unknown function, DUF417 A1D48_RS17240 PF07338 Protein of unknown function (DUF1471) A1D48_RS17245 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS17245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A1D48_RS17250 PF12852 Cupin A1D48_RS17250 PF12833 Helix-turn-helix domain A1D48_RS17260 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS17260 PF00672 HAMP domain A1D48_RS17270 PF04138 GtrA-like protein A1D48_RS17275 PF00535 Glycosyl transferase family 2 A1D48_RS17300 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS17315 PF00072 Response regulator receiver domain A1D48_RS17315 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS17320 PF00419 Fimbrial protein A1D48_RS17325 PF00419 Fimbrial protein A1D48_RS17330 PF13953 PapC C-terminal domain A1D48_RS17330 PF00577 Outer membrane usher protein A1D48_RS17330 PF13954 PapC N-terminal domain A1D48_RS17335 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS17335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS17345 PF00419 Fimbrial protein A1D48_RS17355 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A1D48_RS17355 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A1D48_RS17365 PF04307 LexA-binding, inner membrane-associated putative hydrolase A1D48_RS17380 PF09190 DALR domain A1D48_RS17380 PF01406 tRNA synthetases class I (C) catalytic domain A1D48_RS17385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A1D48_RS17390 PF12850 Calcineurin-like phosphoesterase superfamily domain A1D48_RS17400 PF00731 AIR carboxylase A1D48_RS17405 PF02222 ATP-grasp domain A1D48_RS17405 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A1D48_RS17410 PF00696 Amino acid kinase family A1D48_RS17415 PF11392 Protein of unknown function (DUF2877) A1D48_RS17420 PF06545 Protein of unknown function (DUF1116) A1D48_RS17425 PF00549 CoA-ligase A1D48_RS17425 PF02629 CoA binding domain A1D48_RS17430 PF02615 Malate/L-lactate dehydrogenase A1D48_RS17435 PF01546 Peptidase family M20/M25/M40 A1D48_RS17440 PF05899 Protein of unknown function (DUF861) A1D48_RS17440 PF07883 Cupin domain A1D48_RS17445 PF02595 Glycerate kinase family A1D48_RS17450 PF00860 Permease family A1D48_RS17455 PF01979 Amidohydrolase family A1D48_RS17460 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A1D48_RS17470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A1D48_RS17470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A1D48_RS17475 PF01261 Xylose isomerase-like TIM barrel A1D48_RS17480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A1D48_RS17480 PF00205 Thiamine pyrophosphate enzyme, central domain A1D48_RS17480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A1D48_RS17485 PF09339 IclR helix-turn-helix domain A1D48_RS17485 PF01614 Bacterial transcriptional regulator A1D48_RS17490 PF04115 Ureidoglycolate lyase A1D48_RS17495 PF03466 LysR substrate binding domain A1D48_RS17495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS17505 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS17510 PF09383 NIL domain A1D48_RS17510 PF00005 ABC transporter A1D48_RS17515 PF03180 NLPA lipoprotein A1D48_RS17530 PF00005 ABC transporter A1D48_RS17535 PF13472 GDSL-like Lipase/Acylhydrolase family A1D48_RS17540 PF00106 short chain dehydrogenase A1D48_RS17545 PF00085 Thioredoxin A1D48_RS17550 PF03649 Uncharacterised protein family (UPF0014) A1D48_RS17555 PF00005 ABC transporter A1D48_RS17560 PF16200 C-terminal region of band_7 A1D48_RS17560 PF01145 SPFH domain / Band 7 family A1D48_RS17565 PF01957 NfeD-like C-terminal, partner-binding A1D48_RS17570 PF13411 MerR HTH family regulatory protein A1D48_RS17575 PF00403 Heavy-metal-associated domain A1D48_RS17585 PF01963 TraB family A1D48_RS17590 PF04073 Aminoacyl-tRNA editing domain A1D48_RS17595 PF00149 Calcineurin-like phosphoesterase A1D48_RS17595 PF02872 5'-nucleotidase, C-terminal domain A1D48_RS17600 PF07690 Major Facilitator Superfamily A1D48_RS17605 PF00999 Sodium/hydrogen exchanger family A1D48_RS17605 PF02254 TrkA-N domain A1D48_RS17610 PF00294 pfkB family carbohydrate kinase A1D48_RS17615 PF07859 alpha/beta hydrolase fold A1D48_RS17620 PF00762 Ferrochelatase A1D48_RS17625 PF05191 Adenylate kinase, active site lid A1D48_RS17635 PF00183 Hsp90 protein A1D48_RS17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS17640 PF02132 RecR protein A1D48_RS17640 PF13662 Toprim domain A1D48_RS17645 PF02575 YbaB/EbfC DNA-binding family A1D48_RS17650 PF12170 DNA polymerase III tau subunit V interacting with alpha A1D48_RS17650 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding A1D48_RS17650 PF12169 DNA polymerase III subunits gamma and tau domain III A1D48_RS17655 PF00156 Phosphoribosyl transferase domain A1D48_RS17665 PF04304 Protein of unknown function (DUF454) A1D48_RS17670 PF07445 Primosomal replication protein priC A1D48_RS17675 PF10689 Protein of unknown function (DUF2496) A1D48_RS17680 PF04754 Putative transposase, YhgA-like A1D48_RS17685 PF12795 Mechanosensitive ion channel porin domain A1D48_RS17685 PF00924 Mechanosensitive ion channel A1D48_RS17685 PF12794 Mechanosensitive ion channel inner membrane domain 1 A1D48_RS17690 PF08361 MAATS-type transcriptional repressor, C-terminal region A1D48_RS17690 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS17695 PF00529 HlyD membrane-fusion protein of T1SS A1D48_RS17695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A1D48_RS17700 PF00873 AcrB/AcrD/AcrF family A1D48_RS17705 PF10757 Biofilm formation regulator YbaJ A1D48_RS17710 PF05321 Haemolysin expression modulating protein A1D48_RS17715 PF12464 Maltose acetyltransferase A1D48_RS17715 PF14602 Hexapeptide repeat of succinyl-transferase A1D48_RS17720 PF10777 Inner membrane protein YlaC A1D48_RS17725 PF00444 Ribosomal protein L36 A1D48_RS17730 PF01197 Ribosomal protein L31 A1D48_RS17735 PF12792 CSS motif domain associated with EAL A1D48_RS17735 PF00563 EAL domain A1D48_RS17745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A1D48_RS17750 PF09619 Type III secretion system lipoprotein chaperone (YscW) A1D48_RS17760 PF00909 Ammonium Transporter Family A1D48_RS17765 PF00543 Nitrogen regulatory protein P-II A1D48_RS17770 PF00664 ABC transporter transmembrane region A1D48_RS17770 PF00005 ABC transporter A1D48_RS17775 PF00664 ABC transporter transmembrane region A1D48_RS17775 PF00005 ABC transporter A1D48_RS17780 PF01037 Lrp/AsnC ligand binding domain A1D48_RS17780 PF13404 AsnC-type helix-turn-helix domain A1D48_RS17795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A1D48_RS17795 PF12793 Sugar transport-related sRNA regulator N-term A1D48_RS17800 PF06508 Queuosine biosynthesis protein QueC A1D48_RS17815 PF13145 PPIC-type PPIASE domain A1D48_RS17820 PF00216 Bacterial DNA-binding protein A1D48_RS17825 PF00004 ATPase family associated with various cellular activities (AAA) A1D48_RS17825 PF05362 Lon protease (S16) C-terminal proteolytic domain A1D48_RS17825 PF02190 ATP-dependent protease La (LON) substrate-binding domain A1D48_RS17830 PF10431 C-terminal, D2-small domain, of ClpB protein A1D48_RS17830 PF07724 AAA domain (Cdc48 subfamily) A1D48_RS17830 PF06689 ClpX C4-type zinc finger A1D48_RS17835 PF00574 Clp protease A1D48_RS17840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A1D48_RS17840 PF05697 Bacterial trigger factor protein (TF) A1D48_RS17840 PF05698 Bacterial trigger factor protein (TF) C-terminus A1D48_RS17850 PF01722 BolA-like protein A1D48_RS17860 PF08139 Prokaryotic membrane lipoprotein lipid attachment site A1D48_RS17860 PF03923 Uncharacterized lipoprotein A1D48_RS17865 PF07690 Major Facilitator Superfamily A1D48_RS17870 PF06481 COX Aromatic Rich Motif A1D48_RS17870 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A1D48_RS17875 PF00115 Cytochrome C and Quinol oxidase polypeptide I A1D48_RS17880 PF00510 Cytochrome c oxidase subunit III A1D48_RS17885 PF03626 Prokaryotic Cytochrome C oxidase subunit IV A1D48_RS17890 PF01040 UbiA prenyltransferase family A1D48_RS17905 PF07690 Major Facilitator Superfamily A1D48_RS17910 PF04461 Protein of unknown function (DUF520) A1D48_RS17915 PF02558 Ketopantoate reductase PanE/ApbA A1D48_RS17915 PF08546 Ketopantoate reductase PanE/ApbA C terminal A1D48_RS17920 PF01965 DJ-1/PfpI family A1D48_RS17930 PF00266 Aminotransferase class-V A1D48_RS17935 PF07702 UTRA domain A1D48_RS17935 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS17940 PF01547 Bacterial extracellular solute-binding protein A1D48_RS17945 PF08402 TOBE domain A1D48_RS17945 PF00005 ABC transporter A1D48_RS17950 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS17955 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS17960 PF02568 Thiamine biosynthesis protein (ThiI) A1D48_RS17960 PF02926 THUMP domain A1D48_RS17965 PF02609 Exonuclease VII small subunit A1D48_RS17970 PF00348 Polyprenyl synthetase A1D48_RS17975 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A1D48_RS17975 PF02779 Transketolase, pyrimidine binding domain A1D48_RS17975 PF02780 Transketolase, C-terminal domain A1D48_RS17980 PF00248 Aldo/keto reductase family A1D48_RS17985 PF04608 Phosphatidylglycerophosphatase A A1D48_RS17990 PF00586 AIR synthase related protein, N-terminal domain A1D48_RS17990 PF02769 AIR synthase related protein, C-terminal domain A1D48_RS17995 PF01029 NusB family A1D48_RS18000 PF00885 6,7-dimethyl-8-ribityllumazine synthase A1D48_RS18005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A1D48_RS18005 PF01872 RibD C-terminal domain A1D48_RS18010 PF03477 ATP cone domain A1D48_RS18015 PF11622 Protein of unknown function (DUF3251) A1D48_RS18020 PF03502 Nucleoside-specific channel-forming protein, Tsx A1D48_RS18035 PF01844 HNH endonuclease A1D48_RS18050 PF02355 Protein export membrane protein A1D48_RS18050 PF07549 SecD/SecF GG Motif A1D48_RS18055 PF13721 SecD export protein N-terminal TM region A1D48_RS18055 PF07549 SecD/SecF GG Motif A1D48_RS18055 PF02355 Protein export membrane protein A1D48_RS18060 PF02699 Preprotein translocase subunit A1D48_RS18065 PF01702 Queuine tRNA-ribosyltransferase A1D48_RS18075 PF02547 Queuosine biosynthesis protein A1D48_RS18080 PF04336 Acyl carrier protein phosphodiesterase A1D48_RS18085 PF10417 C-terminal domain of 1-Cys peroxiredoxin A1D48_RS18085 PF00578 AhpC/TSA family A1D48_RS18090 PF00128 Alpha amylase, catalytic domain A1D48_RS18090 PF02903 Alpha amylase, N-terminal ig-like domain A1D48_RS18095 PF00324 Amino acid permease A1D48_RS18100 PF05525 Branched-chain amino acid transport protein A1D48_RS18105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS18105 PF11808 Phosphate regulon sensor protein PhoR A1D48_RS18105 PF00989 PAS fold A1D48_RS18105 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS18110 PF00072 Response regulator receiver domain A1D48_RS18110 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS18115 PF12320 Type 5 capsule protein repressor C-terminal domain A1D48_RS18115 PF00149 Calcineurin-like phosphoesterase A1D48_RS18120 PF13476 AAA domain A1D48_RS18125 PF07690 Major Facilitator Superfamily A1D48_RS18130 PF00480 ROK family A1D48_RS18135 PF04381 Putative exonuclease, RdgC A1D48_RS18140 PF06865 Pyrimidine/purine nucleoside phosphorylase A1D48_RS18145 PF07302 AroM protein A1D48_RS18150 PF16362 YaiA protein A1D48_RS18155 PF01202 Shikimate kinase A1D48_RS18160 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 A1D48_RS18165 PF03807 NADP oxidoreductase coenzyme F420-dependent A1D48_RS18165 PF14748 Pyrroline-5-carboxylate reductase dimerisation A1D48_RS18170 PF00990 Diguanylate cyclase, GGDEF domain A1D48_RS18170 PF05230 MASE2 domain A1D48_RS18175 PF07769 psiF repeat A1D48_RS18185 PF10796 Sigma-S stabilisation anti-adaptor protein A1D48_RS18190 PF07690 Major Facilitator Superfamily A1D48_RS18200 PF07478 D-ala D-ala ligase C-terminus A1D48_RS18200 PF01820 D-ala D-ala ligase N-terminus A1D48_RS18205 PF10953 Protein of unknown function (DUF2754) A1D48_RS18210 PF10954 Protein of unknown function (DUF2755) A1D48_RS18215 PF07759 Protein of unknown function (DUF1615) A1D48_RS18220 PF05992 SbmA/BacA-like family A1D48_RS18230 PF00144 Beta-lactamase A1D48_RS18235 PF15977 Winged helix-turn-helix DNA binding A1D48_RS18240 PF03797 Autotransporter beta-domain A1D48_RS18245 PF00490 Delta-aminolevulinic acid dehydratase A1D48_RS18250 PF13193 AMP-binding enzyme C-terminal domain A1D48_RS18250 PF00501 AMP-binding enzyme A1D48_RS18250 PF16177 Acetyl-coenzyme A synthetase N-terminus A1D48_RS18255 PF03972 MmgE/PrpD family A1D48_RS18260 PF00285 Citrate synthase, C-terminal domain A1D48_RS18270 PF02954 Bacterial regulatory protein, Fis family A1D48_RS18270 PF06506 Propionate catabolism activator A1D48_RS18270 PF00158 Sigma-54 interaction domain A1D48_RS18275 PF07338 Protein of unknown function (DUF1471) A1D48_RS18280 PF01810 LysE type translocator A1D48_RS18285 PF00593 TonB dependent receptor A1D48_RS18285 PF07715 TonB-dependent Receptor Plug Domain A1D48_RS18300 PF02322 Cytochrome bd terminal oxidase subunit II A1D48_RS18305 PF01654 Cytochrome bd terminal oxidase subunit I A1D48_RS18315 PF08774 VRR-NUC domain A1D48_RS18315 PF04851 Type III restriction enzyme, res subunit A1D48_RS18320 PF01555 DNA methylase A1D48_RS18320 PF18273 Type III R-M EcoP15I C-terminal domain A1D48_RS18325 PF07690 Major Facilitator Superfamily A1D48_RS18335 PF09278 MerR, DNA binding A1D48_RS18335 PF00376 MerR family regulatory protein A1D48_RS18340 PF00403 Heavy-metal-associated domain A1D48_RS18345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A1D48_RS18350 PF00873 AcrB/AcrD/AcrF family A1D48_RS18355 PF02321 Outer membrane efflux protein A1D48_RS18375 PF13505 Outer membrane protein beta-barrel domain A1D48_RS18390 PF12792 CSS motif domain associated with EAL A1D48_RS18390 PF00563 EAL domain A1D48_RS18415 PF16970 Type-1 fimbrial protein, A A1D48_RS18420 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS18420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS18425 PF13954 PapC N-terminal domain A1D48_RS18425 PF13953 PapC C-terminal domain A1D48_RS18425 PF00577 Outer membrane usher protein A1D48_RS18435 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS18435 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS18450 PF00171 Aldehyde dehydrogenase family A1D48_RS18455 PF01472 PUA domain A1D48_RS18455 PF00696 Amino acid kinase family A1D48_RS18460 PF00267 Gram-negative porin A1D48_RS18465 PF07417 Sigma factor-binding transcriptional regulator Crl A1D48_RS18470 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) A1D48_RS18475 PF00156 Phosphoribosyl transferase domain A1D48_RS18480 PF01546 Peptidase family M20/M25/M40 A1D48_RS18480 PF07687 Peptidase dimerisation domain A1D48_RS18485 PF00472 RF-1 domain A1D48_RS18495 PF00817 impB/mucB/samB family A1D48_RS18495 PF11799 impB/mucB/samB family C-terminal domain A1D48_RS18495 PF11798 IMS family HHH motif A1D48_RS18500 PF03734 L,D-transpeptidase catalytic domain A1D48_RS18505 PF13230 Glutamine amidotransferases class-II A1D48_RS18510 PF13580 SIS domain A1D48_RS18515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A1D48_RS18515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A1D48_RS18515 PF02770 Acyl-CoA dehydrogenase, middle domain A1D48_RS18515 PF09317 Domain of unknown function (DUF1974) A1D48_RS18520 PF00795 Carbon-nitrogen hydrolase A1D48_RS18530 PF13505 Outer membrane protein beta-barrel domain A1D48_RS18550 PF01037 Lrp/AsnC ligand binding domain A1D48_RS18550 PF13404 AsnC-type helix-turn-helix domain A1D48_RS18670 PF03527 RHS protein A1D48_RS18670 PF05593 RHS Repeat A1D48_RS18680 PF04717 Type VI secretion system, phage-baseplate injector A1D48_RS18680 PF06715 Gp5 C-terminal repeat (3 copies) A1D48_RS18725 PF06761 Intracellular multiplication and human macrophage-killing A1D48_RS18725 PF06744 Type VI secretion protein IcmF C-terminal A1D48_RS18725 PF14331 ImcF-related N-terminal domain A1D48_RS18745 PF05736 OprF membrane domain A1D48_RS18745 PF00691 OmpA family A1D48_RS18750 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE A1D48_RS18795 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath A1D48_RS18800 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 A1D48_RS18805 PF10431 C-terminal, D2-small domain, of ClpB protein A1D48_RS18805 PF17871 AAA lid domain A1D48_RS18805 PF00004 ATPase family associated with various cellular activities (AAA) A1D48_RS18805 PF07724 AAA domain (Cdc48 subfamily) A1D48_RS18820 PF04965 Gene 25-like lysozyme A1D48_RS18825 PF05947 Type VI secretion system, TssF A1D48_RS18850 PF00929 Exonuclease A1D48_RS18855 PF00075 RNase H A1D48_RS18860 PF08241 Methyltransferase domain A1D48_RS18865 PF16123 Hydroxyacylglutathione hydrolase C-terminus A1D48_RS18865 PF00753 Metallo-beta-lactamase superfamily A1D48_RS18870 PF01476 LysM domain A1D48_RS18870 PF01464 Transglycosylase SLT domain A1D48_RS18875 PF08241 Methyltransferase domain A1D48_RS18880 PF03372 Endonuclease/Exonuclease/phosphatase family A1D48_RS18885 PF07690 Major Facilitator Superfamily A1D48_RS18890 PF03466 LysR substrate binding domain A1D48_RS18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS18895 PF00248 Aldo/keto reductase family A1D48_RS18935 PF09383 NIL domain A1D48_RS18935 PF00005 ABC transporter A1D48_RS18940 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS18945 PF03180 NLPA lipoprotein A1D48_RS18950 PF16358 RcsF lipoprotein A1D48_RS18955 PF18389 TrmO C-terminal domain A1D48_RS18955 PF01980 tRNA-methyltransferase O A1D48_RS18960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A1D48_RS18960 PF03129 Anticodon binding domain A1D48_RS18960 PF04073 Aminoacyl-tRNA editing domain A1D48_RS18965 PF17185 NlpE C-terminal OB domain A1D48_RS18965 PF04170 NlpE N-terminal domain A1D48_RS18970 PF00472 RF-1 domain A1D48_RS18975 PF07152 YaeQ protein A1D48_RS18980 PF06786 Uncharacterised protein family (UPF0253) A1D48_RS18985 PF07073 Modulator of Rho-dependent transcription termination (ROF) A1D48_RS18990 PF01171 PP-loop family A1D48_RS18990 PF09179 TilS substrate binding domain A1D48_RS18990 PF11734 TilS substrate C-terminal domain A1D48_RS18995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A1D48_RS19000 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A1D48_RS19000 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A1D48_RS19000 PF01276 Orn/Lys/Arg decarboxylase, major domain A1D48_RS19005 PF18416 N-acetylglucosamine binding protein domain 2 A1D48_RS19005 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading A1D48_RS19010 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A1D48_RS19015 PF01336 OB-fold nucleic acid binding domain A1D48_RS19015 PF02811 PHP domain A1D48_RS19015 PF14579 Helix-hairpin-helix motif A1D48_RS19015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A1D48_RS19015 PF07733 Bacterial DNA polymerase III alpha NTPase domain A1D48_RS19020 PF01351 Ribonuclease HII A1D48_RS19025 PF02684 Lipid-A-disaccharide synthetase A1D48_RS19030 PF00132 Bacterial transferase hexapeptide (six repeats) A1D48_RS19030 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A1D48_RS19035 PF07977 FabA-like domain A1D48_RS19040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A1D48_RS19040 PF00132 Bacterial transferase hexapeptide (six repeats) A1D48_RS19045 PF03938 Outer membrane protein (OmpH-like) A1D48_RS19050 PF07244 Surface antigen variable number repeat A1D48_RS19050 PF01103 Surface antigen A1D48_RS19055 PF02163 Peptidase family M50 A1D48_RS19055 PF17820 PDZ domain A1D48_RS19065 PF01255 Putative undecaprenyl diphosphate synthase A1D48_RS19075 PF13288 DXP reductoisomerase C-terminal domain A1D48_RS19075 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A1D48_RS19075 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A1D48_RS19080 PF01765 Ribosome recycling factor A1D48_RS19085 PF00696 Amino acid kinase family A1D48_RS19090 PF00889 Elongation factor TS A1D48_RS19100 PF00318 Ribosomal protein S2 A1D48_RS19105 PF00557 Metallopeptidase family M24 A1D48_RS19115 PF01842 ACT domain A1D48_RS19115 PF01909 Nucleotidyltransferase domain A1D48_RS19115 PF08335 GlnD PII-uridylyltransferase A1D48_RS19115 PF01966 HD domain A1D48_RS19120 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal A1D48_RS19120 PF14602 Hexapeptide repeat of succinyl-transferase A1D48_RS19120 PF00132 Bacterial transferase hexapeptide (six repeats) A1D48_RS19125 PF07690 Major Facilitator Superfamily A1D48_RS19125 PF00083 Sugar (and other) transporter A1D48_RS19130 PF11944 Protein of unknown function (DUF3461) A1D48_RS19135 PF05651 Putative sugar diacid recognition A1D48_RS19135 PF13556 PucR C-terminal helix-turn-helix domain A1D48_RS19135 PF17853 GGDEF-like domain A1D48_RS19140 PF00595 PDZ domain A1D48_RS19145 PF01966 HD domain A1D48_RS19145 PF13286 Phosphohydrolase-associated domain A1D48_RS19150 PF01048 Phosphorylase superfamily A1D48_RS19155 PF01497 Periplasmic binding protein A1D48_RS19160 PF03458 UPF0126 domain A1D48_RS19165 PF01521 Iron-sulphur cluster biosynthesis A1D48_RS19170 PF00654 Voltage gated chloride channel A1D48_RS19175 PF00202 Aminotransferase class-III A1D48_RS19180 PF11245 Protein of unknown function (DUF2544) A1D48_RS19185 PF00419 Fimbrial protein A1D48_RS19190 PF00419 Fimbrial protein A1D48_RS19195 PF00419 Fimbrial protein A1D48_RS19200 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS19200 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS19205 PF13954 PapC N-terminal domain A1D48_RS19205 PF13953 PapC C-terminal domain A1D48_RS19205 PF00577 Outer membrane usher protein A1D48_RS19220 PF01032 FecCD transport family A1D48_RS19225 PF01497 Periplasmic binding protein A1D48_RS19230 PF00005 ABC transporter A1D48_RS19235 PF00593 TonB dependent receptor A1D48_RS19235 PF07715 TonB-dependent Receptor Plug Domain A1D48_RS19240 PF00912 Transglycosylase A1D48_RS19240 PF00905 Penicillin binding protein transpeptidase domain A1D48_RS19240 PF14814 Bifunctional transglycosylase second domain A1D48_RS19240 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal A1D48_RS19245 PF00270 DEAD/DEAH box helicase A1D48_RS19245 PF04408 Helicase associated domain (HA2) A1D48_RS19245 PF08482 ATP-dependent helicase C-terminal A1D48_RS19245 PF00271 Helicase conserved C-terminal domain A1D48_RS19250 PF02834 LigT like Phosphoesterase A1D48_RS19255 PF17746 SfsA N-terminal OB domain A1D48_RS19255 PF03749 Sugar fermentation stimulation protein RE domain A1D48_RS19260 PF01258 Prokaryotic dksA/traR C4-type zinc finger A1D48_RS19265 PF00749 tRNA synthetases class I (E and Q), catalytic domain A1D48_RS19270 PF12627 Probable RNA and SrmB- binding site of polymerase A A1D48_RS19270 PF01743 Poly A polymerase head domain A1D48_RS19270 PF12626 Polymerase A arginine-rich C-terminus A1D48_RS19275 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A1D48_RS19280 PF02548 Ketopantoate hydroxymethyltransferase A1D48_RS19285 PF02569 Pantoate-beta-alanine ligase A1D48_RS19290 PF02261 Aspartate decarboxylase A1D48_RS19300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS19300 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS19305 PF00577 Outer membrane usher protein A1D48_RS19305 PF13954 PapC N-terminal domain A1D48_RS19305 PF13953 PapC C-terminal domain A1D48_RS19310 PF00419 Fimbrial protein A1D48_RS19330 PF01522 Polysaccharide deacetylase A1D48_RS19335 PF03610 PTS system fructose IIA component A1D48_RS19345 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS19345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS19350 PF00577 Outer membrane usher protein A1D48_RS19350 PF13953 PapC C-terminal domain A1D48_RS19350 PF13954 PapC N-terminal domain A1D48_RS19355 PF00419 Fimbrial protein A1D48_RS19360 PF01061 ABC-2 type transporter A1D48_RS19365 PF00005 ABC transporter A1D48_RS19370 PF00484 Carbonic anhydrase A1D48_RS19375 PF00156 Phosphoribosyl transferase domain A1D48_RS19380 PF01011 PQQ enzyme repeat A1D48_RS19385 PF00394 Multicopper oxidase A1D48_RS19385 PF07731 Multicopper oxidase A1D48_RS19385 PF07732 Multicopper oxidase A1D48_RS19390 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) A1D48_RS19395 PF17284 Spermidine synthase tetramerisation domain A1D48_RS19400 PF02675 S-adenosylmethionine decarboxylase A1D48_RS19405 PF00455 DeoR C terminal sensor domain A1D48_RS19405 PF08220 DeoR-like helix-turn-helix domain A1D48_RS19410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A1D48_RS19415 PF07005 Sugar-binding N-terminal domain A1D48_RS19415 PF17042 Nucleotide-binding C-terminal domain A1D48_RS19420 PF03812 2-keto-3-deoxygluconate permease A1D48_RS19425 PF06062 Uncharacterised protein family (UPF0231) A1D48_RS19440 PF11791 Aconitate B N-terminal domain A1D48_RS19440 PF06434 Aconitate hydratase 2 N-terminus A1D48_RS19440 PF00330 Aconitase family (aconitate hydratase) A1D48_RS19470 PF00330 Aconitase family (aconitate hydratase) A1D48_RS19470 PF06434 Aconitate hydratase 2 N-terminus A1D48_RS19470 PF11791 Aconitate B N-terminal domain A1D48_RS19480 PF11737 Protein of unknown function (DUF3300) A1D48_RS19495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A1D48_RS19495 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS19500 PF00364 Biotin-requiring enzyme A1D48_RS19500 PF02817 e3 binding domain A1D48_RS19500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A1D48_RS19505 PF00456 Transketolase, thiamine diphosphate binding domain A1D48_RS19505 PF17831 Pyruvate dehydrogenase E1 component middle domain A1D48_RS19510 PF07729 FCD domain A1D48_RS19510 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS19515 PF00324 Amino acid permease A1D48_RS19525 PF04616 Glycosyl hydrolases family 43 A1D48_RS19525 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain A1D48_RS19530 PF17113 Regulatory signalling modulator protein AmpE A1D48_RS19535 PF01510 N-acetylmuramoyl-L-alanine amidase A1D48_RS19540 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A1D48_RS19540 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A1D48_RS19550 PF07963 Prokaryotic N-terminal methylation motif A1D48_RS19555 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A1D48_RS19555 PF00437 Type II/IV secretion system protein A1D48_RS19560 PF00482 Type II secretion system (T2SS), protein F A1D48_RS19565 PF00478 IMP dehydrogenase / GMP reductase domain A1D48_RS19570 PF01121 Dephospho-CoA kinase A1D48_RS19575 PF07072 Cell division protein A1D48_RS19580 PF03884 DNA gyrase inhibitor YacG A1D48_RS19585 PF03466 LysR substrate binding domain A1D48_RS19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS19590 PF00248 Aldo/keto reductase family A1D48_RS19595 PF00293 NUDIX domain A1D48_RS19600 PF01043 SecA preprotein cross-linking domain A1D48_RS19600 PF07516 SecA Wing and Scaffold domain A1D48_RS19600 PF02810 SEC-C motif A1D48_RS19600 PF07517 SecA DEAD-like domain A1D48_RS19605 PF06558 Secretion monitor precursor protein (SecM) A1D48_RS19610 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A1D48_RS19615 PF12327 FtsZ family, C-terminal domain A1D48_RS19615 PF00091 Tubulin/FtsZ family, GTPase domain A1D48_RS19620 PF02491 SHS2 domain inserted in FTSA A1D48_RS19625 PF03799 Cell division protein FtsQ A1D48_RS19625 PF08478 POTRA domain, FtsQ-type A1D48_RS19630 PF07478 D-ala D-ala ligase C-terminus A1D48_RS19630 PF01820 D-ala D-ala ligase N-terminus A1D48_RS19635 PF08245 Mur ligase middle domain A1D48_RS19635 PF01225 Mur ligase family, catalytic domain A1D48_RS19635 PF02875 Mur ligase family, glutamate ligase domain A1D48_RS19640 PF03033 Glycosyltransferase family 28 N-terminal domain A1D48_RS19640 PF04101 Glycosyltransferase family 28 C-terminal domain A1D48_RS19645 PF01098 Cell cycle protein A1D48_RS19650 PF08245 Mur ligase middle domain A1D48_RS19650 PF02875 Mur ligase family, glutamate ligase domain A1D48_RS19655 PF00953 Glycosyl transferase family 4 A1D48_RS19655 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A1D48_RS19660 PF02875 Mur ligase family, glutamate ligase domain A1D48_RS19660 PF01225 Mur ligase family, catalytic domain A1D48_RS19660 PF08245 Mur ligase middle domain A1D48_RS19665 PF08245 Mur ligase middle domain A1D48_RS19665 PF01225 Mur ligase family, catalytic domain A1D48_RS19665 PF02875 Mur ligase family, glutamate ligase domain A1D48_RS19670 PF00905 Penicillin binding protein transpeptidase domain A1D48_RS19670 PF03717 Penicillin-binding Protein dimerisation domain A1D48_RS19675 PF04999 Cell division protein FtsL A1D48_RS19680 PF01795 MraW methylase family A1D48_RS19685 PF02381 MraZ protein, putative antitoxin-like A1D48_RS19690 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS19690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A1D48_RS19695 PF10369 Small subunit of acetolactate synthase A1D48_RS19700 PF00205 Thiamine pyrophosphate enzyme, central domain A1D48_RS19700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A1D48_RS19700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A1D48_RS19705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS19705 PF03466 LysR substrate binding domain A1D48_RS19710 PF08054 Leucine operon leader peptide A1D48_RS19715 PF08502 LeuA allosteric (dimerisation) domain A1D48_RS19715 PF00682 HMGL-like A1D48_RS19720 PF00180 Isocitrate/isopropylmalate dehydrogenase A1D48_RS19725 PF00330 Aconitase family (aconitate hydratase) A1D48_RS19730 PF00694 Aconitase C-terminal domain A1D48_RS19740 PF12793 Sugar transport-related sRNA regulator N-term A1D48_RS19740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A1D48_RS19750 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS19755 PF00005 ABC transporter A1D48_RS19760 PF09335 SNARE associated Golgi protein A1D48_RS19765 PF02311 AraC-like ligand binding domain A1D48_RS19765 PF12833 Helix-turn-helix domain A1D48_RS19770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A1D48_RS19775 PF02610 L-arabinose isomerase A1D48_RS19775 PF11762 L-arabinose isomerase C-terminal domain A1D48_RS19780 PF00596 Class II Aldolase and Adducin N-terminal domain A1D48_RS19800 PF00136 DNA polymerase family B A1D48_RS19800 PF03104 DNA polymerase family B, exonuclease domain A1D48_RS19805 PF18337 RapA N-terminal Tudor like domain A1D48_RS19805 PF18339 RapA N-terminal Tudor like domain 1 A1D48_RS19805 PF00176 SNF2 family N-terminal domain A1D48_RS19805 PF12137 RNA polymerase recycling family C-terminal A1D48_RS19805 PF00271 Helicase conserved C-terminal domain A1D48_RS19810 PF00849 RNA pseudouridylate synthase A1D48_RS19815 PF05099 Tellurite resistance protein TerB A1D48_RS19815 PF00226 DnaJ domain A1D48_RS19820 PF03968 OstA-like protein A1D48_RS19820 PF04453 LPS transport system D A1D48_RS19825 PF00639 PPIC-type PPIASE domain A1D48_RS19825 PF09312 SurA N-terminal domain A1D48_RS19830 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A1D48_RS19835 PF00398 Ribosomal RNA adenine dimethylase A1D48_RS19840 PF04379 ApaG domain A1D48_RS19845 PF00149 Calcineurin-like phosphoesterase A1D48_RS19850 PF00186 Dihydrofolate reductase A1D48_RS19860 PF02254 TrkA-N domain A1D48_RS19860 PF00999 Sodium/hydrogen exchanger family A1D48_RS19865 PF02525 Flavodoxin-like fold A1D48_RS19875 PF00884 Sulfatase A1D48_RS19895 PF06004 Bacterial protein of unknown function (DUF903) A1D48_RS19900 PF00083 Sugar (and other) transporter A1D48_RS19910 PF01494 FAD binding domain A1D48_RS19915 PF00766 Electron transfer flavoprotein FAD-binding domain A1D48_RS19915 PF01012 Electron transfer flavoprotein domain A1D48_RS19920 PF01012 Electron transfer flavoprotein domain A1D48_RS19930 PF02028 BCCT, betaine/carnitine/choline family transporter A1D48_RS19935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A1D48_RS19935 PF02770 Acyl-CoA dehydrogenase, middle domain A1D48_RS19935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A1D48_RS19940 PF02515 CoA-transferase family III A1D48_RS19945 PF13193 AMP-binding enzyme C-terminal domain A1D48_RS19945 PF00501 AMP-binding enzyme A1D48_RS19950 PF00378 Enoyl-CoA hydratase/isomerase A1D48_RS19955 PF00132 Bacterial transferase hexapeptide (six repeats) A1D48_RS19960 PF07180 CaiF/GrlA transcriptional regulator A1D48_RS19965 PF02142 MGS-like domain A1D48_RS19965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A1D48_RS19965 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A1D48_RS19970 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A1D48_RS19970 PF00117 Glutamine amidotransferase class-I A1D48_RS19980 PF01113 Dihydrodipicolinate reductase, N-terminus A1D48_RS19980 PF05173 Dihydrodipicolinate reductase, C-terminus A1D48_RS19985 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase A1D48_RS19990 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase A1D48_RS19995 PF04223 Citrate lyase, alpha subunit (CitF) A1D48_RS20000 PF03328 HpcH/HpaI aldolase/citrate lyase family A1D48_RS20005 PF06857 Malonate decarboxylase delta subunit (MdcD) A1D48_RS20010 PF00583 Acetyltransferase (GNAT) family A1D48_RS20010 PF08218 Citrate lyase ligase C-terminal domain A1D48_RS20015 PF03390 2-hydroxycarboxylate transporter family A1D48_RS20020 PF04277 Oxaloacetate decarboxylase, gamma chain A1D48_RS20025 PF00682 HMGL-like A1D48_RS20025 PF00364 Biotin-requiring enzyme A1D48_RS20025 PF02436 Conserved carboxylase domain A1D48_RS20030 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit A1D48_RS20035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS20035 PF17203 Single cache domain 3 A1D48_RS20040 PF00072 Response regulator receiver domain A1D48_RS20040 PF12431 Transcriptional regulator A1D48_RS20045 PF01156 Inosine-uridine preferring nucleoside hydrolase A1D48_RS20055 PF02401 LytB protein A1D48_RS20060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A1D48_RS20065 PF01252 Signal peptidase (SPase) II A1D48_RS20070 PF00133 tRNA synthetases class I (I, L, M and V) A1D48_RS20070 PF06827 Zinc finger found in FPG and IleRS A1D48_RS20070 PF08264 Anticodon-binding domain of tRNA A1D48_RS20075 PF01687 Riboflavin kinase A1D48_RS20075 PF06574 FAD synthetase A1D48_RS20080 PF10837 Protein of unknown function (DUF2575) A1D48_RS20085 PF01649 Ribosomal protein S20 A1D48_RS20095 PF01055 Glycosyl hydrolases family 31 A1D48_RS20100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS20100 PF03466 LysR substrate binding domain A1D48_RS20105 PF06965 Na+/H+ antiporter 1 A1D48_RS20120 PF13186 Iron-sulfur cluster-binding domain A1D48_RS20120 PF04055 Radical SAM superfamily A1D48_RS20125 PF00884 Sulfatase A1D48_RS20125 PF16385 Domain of unknown function A1D48_RS20135 PF00149 Calcineurin-like phosphoesterase A1D48_RS20135 PF02872 5'-nucleotidase, C-terminal domain A1D48_RS20150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS20150 PF03466 LysR substrate binding domain A1D48_RS20170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS20170 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS20175 PF16970 Type-1 fimbrial protein, A A1D48_RS20180 PF00419 Fimbrial protein A1D48_RS20185 PF00419 Fimbrial protein A1D48_RS20190 PF13953 PapC C-terminal domain A1D48_RS20190 PF00577 Outer membrane usher protein A1D48_RS20190 PF13954 PapC N-terminal domain A1D48_RS20195 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS20195 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS20200 PF00419 Fimbrial protein A1D48_RS20215 PF00704 Glycosyl hydrolases family 18 A1D48_RS20235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS20235 PF03466 LysR substrate binding domain A1D48_RS20240 PF00226 DnaJ domain A1D48_RS20240 PF00684 DnaJ central domain A1D48_RS20240 PF01556 DnaJ C terminal domain A1D48_RS20245 PF00012 Hsp70 protein A1D48_RS20250 PF10807 Protein of unknown function (DUF2541) A1D48_RS20255 PF03981 Ubiquinol-cytochrome C chaperone A1D48_RS20255 PF13099 Domain of unknown function (DUF3944) A1D48_RS20260 PF01184 GPR1/FUN34/yaaH family A1D48_RS20265 PF00994 Probable molybdopterin binding domain A1D48_RS20270 PF00923 Transaldolase/Fructose-6-phosphate aldolase A1D48_RS20275 PF01235 Sodium:alanine symporter family A1D48_RS20280 PF03883 Peroxide stress protein YaaA A1D48_RS20285 PF00291 Pyridoxal-phosphate dependent enzyme A1D48_RS20285 PF14821 Threonine synthase N terminus A1D48_RS20290 PF08544 GHMP kinases C terminal A1D48_RS20290 PF00288 GHMP kinases N terminal domain A1D48_RS20295 PF00742 Homoserine dehydrogenase A1D48_RS20295 PF13840 ACT domain A1D48_RS20295 PF01842 ACT domain A1D48_RS20295 PF03447 Homoserine dehydrogenase, NAD binding domain A1D48_RS20295 PF00696 Amino acid kinase family A1D48_RS20300 PF08254 Threonine leader peptide A1D48_RS20305 PF00588 SpoU rRNA Methylase family A1D48_RS20315 PF00072 Response regulator receiver domain A1D48_RS20315 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS20325 PF15977 Winged helix-turn-helix DNA binding A1D48_RS20335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS20335 PF02753 Pili assembly chaperone PapD, C-terminal domain A1D48_RS20340 PF00577 Outer membrane usher protein A1D48_RS20340 PF13954 PapC N-terminal domain A1D48_RS20340 PF13953 PapC C-terminal domain A1D48_RS20355 PF06123 Inner membrane protein CreD A1D48_RS20360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS20360 PF00672 HAMP domain A1D48_RS20360 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS20365 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS20365 PF00072 Response regulator receiver domain A1D48_RS20370 PF05981 CreA protein A1D48_RS20375 PF12833 Helix-turn-helix domain A1D48_RS20375 PF06445 GyrI-like small molecule binding domain A1D48_RS20380 PF00300 Histidine phosphatase superfamily (branch 1) A1D48_RS20385 PF01931 Protein of unknown function DUF84 A1D48_RS20395 PF01371 Trp repressor protein A1D48_RS20400 PF01464 Transglycosylase SLT domain A1D48_RS20400 PF14718 Soluble lytic murein transglycosylase L domain A1D48_RS20410 PF12848 ABC transporter A1D48_RS20410 PF00005 ABC transporter A1D48_RS20415 PF01381 Helix-turn-helix A1D48_RS20415 PF13521 AAA domain A1D48_RS20420 PF18073 Rubredoxin metal binding domain A1D48_RS20425 PF18429 Domain of unknown function (DUF5609) A1D48_RS20435 PF10144 Bacterial virulence factor haemolysin A1D48_RS20440 PF10437 Bacterial lipoate protein ligase C-terminus A1D48_RS20440 PF03099 Biotin/lipoate A/B protein ligase family A1D48_RS20455 PF06551 Protein of unknown function (DUF1120) A1D48_RS20460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A1D48_RS20465 PF13953 PapC C-terminal domain A1D48_RS20465 PF13954 PapC N-terminal domain A1D48_RS20465 PF00577 Outer membrane usher protein A1D48_RS20475 PF01048 Phosphorylase superfamily A1D48_RS20480 PF01676 Metalloenzyme superfamily A1D48_RS20485 PF02885 Glycosyl transferase family, helical bundle domain A1D48_RS20485 PF00591 Glycosyl transferase family, a/b domain A1D48_RS20485 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain A1D48_RS20490 PF01791 DeoC/LacD family aldolase A1D48_RS20495 PF11230 Protein of unknown function (DUF3029) A1D48_RS20500 PF04055 Radical SAM superfamily A1D48_RS20505 PF01026 TatD related DNase A1D48_RS20510 PF01734 Patatin-like phospholipase A1D48_RS20515 PF07043 Protein of unknown function (DUF1328) A1D48_RS20520 PF04972 BON domain A1D48_RS20525 PF00009 Elongation factor Tu GTP binding domain A1D48_RS20525 PF03144 Elongation factor Tu domain 2 A1D48_RS20525 PF16658 Class II release factor RF3, C-terminal domain A1D48_RS20530 PF13419 Haloacid dehalogenase-like hydrolase A1D48_RS20535 PF00583 Acetyltransferase (GNAT) family A1D48_RS20540 PF03603 DNA polymerase III psi subunit A1D48_RS20545 PF05175 Methyltransferase small domain A1D48_RS20545 PF08468 Methyltransferase small domain N-terminal A1D48_RS20565 PF07256 Protein of unknown function (DUF1435) A1D48_RS20570 PF00990 Diguanylate cyclase, GGDEF domain A1D48_RS20570 PF05230 MASE2 domain A1D48_RS20575 PF11575 FhuF 2Fe-2S C-terminal domain A1D48_RS20575 PF06276 Ferric iron reductase FhuF-like transporter A1D48_RS20580 PF04073 Aminoacyl-tRNA editing domain A1D48_RS20585 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS20590 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS20595 PF06738 Putative threonine/serine exporter A1D48_RS20600 PF12821 Threonine/Serine exporter, ThrE A1D48_RS20605 PF17948 DnaT DNA-binding domain A1D48_RS20610 PF01695 IstB-like ATP binding protein A1D48_RS20615 PF10696 Protein of unknown function (DUF2501) A1D48_RS20620 PF00884 Sulfatase A1D48_RS20625 PF00672 HAMP domain A1D48_RS20625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A1D48_RS20625 PF02203 Tar ligand binding domain homologue A1D48_RS20630 PF13722 5TM C-terminal transporter carbon starvation CstA A1D48_RS20630 PF02554 Carbon starvation protein CstA A1D48_RS20635 PF04328 Selenoprotein, putative A1D48_RS20640 PF07683 Cobalamin synthesis protein cobW C-terminal domain A1D48_RS20640 PF02492 CobW/HypB/UreG, nucleotide-binding domain A1D48_RS20645 PF12833 Helix-turn-helix domain A1D48_RS20645 PF02311 AraC-like ligand binding domain A1D48_RS20650 PF01810 LysE type translocator A1D48_RS20670 PF00171 Aldehyde dehydrogenase family A1D48_RS20675 PF04754 Putative transposase, YhgA-like A1D48_RS20680 PF07690 Major Facilitator Superfamily A1D48_RS20685 PF04286 Protein of unknown function (DUF445) A1D48_RS20690 PF06779 Uncharacterised MFS-type transporter YbfB A1D48_RS20695 PF07670 Nucleoside recognition A1D48_RS20700 PF07670 Nucleoside recognition A1D48_RS20705 PF01979 Amidohydrolase family A1D48_RS20710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS20710 PF03466 LysR substrate binding domain A1D48_RS20715 PF01177 Asp/Glu/Hydantoin racemase A1D48_RS20730 PF00579 tRNA synthetases class I (W and Y) A1D48_RS20735 PF07729 FCD domain A1D48_RS20735 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS20745 PF01738 Dienelactone hydrolase family A1D48_RS20750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A1D48_RS20750 PF03625 Domain of unknown function DUF302 A1D48_RS20775 PF09857 Putative toxin of bacterial toxin-antitoxin pair A1D48_RS20780 PF13847 Methyltransferase domain A1D48_RS20790 PF01709 Transcriptional regulator A1D48_RS20805 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A1D48_RS20815 PF00772 DnaB-like helicase N terminal domain A1D48_RS20815 PF03796 DnaB-like helicase C terminal domain A1D48_RS20835 PF03797 Autotransporter beta-domain A1D48_RS20835 PF03212 Pertactin A1D48_RS20835 PF16168 Adhesin of bacterial autotransporter system, probable stalk A1D48_RS20855 PF01119 DNA mismatch repair protein, C-terminal domain A1D48_RS20855 PF08676 MutL C terminal dimerisation domain A1D48_RS20860 PF04545 Sigma-70, region 4 A1D48_RS20860 PF04539 Sigma-70 region 3 A1D48_RS20860 PF04542 Sigma-70 region 2 A1D48_RS20860 PF00140 Sigma-70 factor, region 1.2 A1D48_RS20860 PF03979 Sigma-70 factor, region 1.1 A1D48_RS20860 PF04546 Sigma-70, non-essential region A1D48_RS20985 PF01381 Helix-turn-helix A1D48_RS20990 PF01381 Helix-turn-helix A1D48_RS20995 PF13693 Winged helix-turn-helix DNA-binding A1D48_RS21000 PF00027 Cyclic nucleotide-binding domain A1D48_RS21005 PF00145 C-5 cytosine-specific DNA methylase A1D48_RS21005 PF18284 DNA methylase N-terminal domain A1D48_RS21010 PF09019 EcoRII C terminal A1D48_RS21010 PF09217 Restriction endonuclease EcoRII, N-terminal A1D48_RS21015 PF13186 Iron-sulfur cluster-binding domain A1D48_RS21015 PF04055 Radical SAM superfamily A1D48_RS21050 PF00145 C-5 cytosine-specific DNA methylase A1D48_RS21065 PF18818 Metallopeptidase superfamily domain A1D48_RS21065 PF08401 Domain of unknown function (DUF1738) A1D48_RS21070 PF00293 NUDIX domain A1D48_RS21090 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS21090 PF00107 Zinc-binding dehydrogenase A1D48_RS21095 PF01202 Shikimate kinase A1D48_RS21100 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS21100 PF00107 Zinc-binding dehydrogenase A1D48_RS21105 PF00106 short chain dehydrogenase A1D48_RS21110 PF02447 GntP family permease A1D48_RS21115 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS21120 PF03739 Lipopolysaccharide export system permease LptF/LptG A1D48_RS21125 PF03739 Lipopolysaccharide export system permease LptF/LptG A1D48_RS21140 PF00883 Cytosol aminopeptidase family, catalytic domain A1D48_RS21140 PF02789 Cytosol aminopeptidase family, N-terminal domain A1D48_RS21145 PF04364 DNA polymerase III chi subunit, HolC A1D48_RS21150 PF00133 tRNA synthetases class I (I, L, M and V) A1D48_RS21150 PF08264 Anticodon-binding domain of tRNA A1D48_RS21150 PF10458 Valyl tRNA synthetase tRNA binding arm A1D48_RS21155 PF05987 Bacterial protein of unknown function (DUF898) A1D48_RS21160 PF00583 Acetyltransferase (GNAT) family A1D48_RS21165 PF12276 Protein of unknown function (DUF3617) A1D48_RS21170 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) A1D48_RS21175 PF06877 Regulator of ribonuclease activity B A1D48_RS21180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A1D48_RS21180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A1D48_RS21185 PF04074 YhcH/YjgK/YiaL A1D48_RS21205 PF00696 Amino acid kinase family A1D48_RS21210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A1D48_RS21210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A1D48_RS21215 PF03606 C4-dicarboxylate anaerobic carrier A1D48_RS21220 PF01316 Arginine repressor, DNA binding domain A1D48_RS21220 PF02863 Arginine repressor, C-terminal domain A1D48_RS21230 PF08052 PyrBI operon leader peptide A1D48_RS21235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A1D48_RS21235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A1D48_RS21240 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain A1D48_RS21240 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain A1D48_RS21245 PF01042 Endoribonuclease L-PSP A1D48_RS21255 PF00690 Cation transporter/ATPase, N-terminus A1D48_RS21255 PF00689 Cation transporting ATPase, C-terminus A1D48_RS21260 PF17059 MgtA leader peptide A1D48_RS21265 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS21270 PF00367 phosphotransferase system, EIIB A1D48_RS21270 PF02378 Phosphotransferase system, EIIC A1D48_RS21275 PF11941 Domain of unknown function (DUF3459) A1D48_RS21275 PF00128 Alpha amylase, catalytic domain A1D48_RS21280 PF03477 ATP cone domain A1D48_RS21280 PF13597 Anaerobic ribonucleoside-triphosphate reductase A1D48_RS21290 PF05016 ParE toxin of type II toxin-antitoxin system, parDE A1D48_RS21295 PF04221 RelB antitoxin A1D48_RS21300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A1D48_RS21300 PF00874 PRD domain A1D48_RS21300 PF08279 HTH domain A1D48_RS21300 PF05043 Mga helix-turn-helix domain A1D48_RS21305 PF07071 KDGP aldolase A1D48_RS21310 PF03841 L-seryl-tRNA selenium transferase A1D48_RS21315 PF01979 Amidohydrolase family A1D48_RS21345 PF07361 Cytochrome b562 A1D48_RS21350 PF01523 Putative modulator of DNA gyrase A1D48_RS21355 PF04751 Protein of unknown function (DUF615) A1D48_RS21360 PF01225 Mur ligase family, catalytic domain A1D48_RS21360 PF08245 Mur ligase middle domain A1D48_RS21360 PF02875 Mur ligase family, glutamate ligase domain A1D48_RS21365 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain A1D48_RS21370 PF00719 Inorganic pyrophosphatase A1D48_RS21375 PF01979 Amidohydrolase family A1D48_RS21380 PF07690 Major Facilitator Superfamily A1D48_RS21385 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like A1D48_RS21390 PF04357 TamB, inner membrane protein subunit of TAM complex A1D48_RS21395 PF17243 POTRA domain TamA domain 1 A1D48_RS21395 PF07244 Surface antigen variable number repeat A1D48_RS21395 PF01103 Surface antigen A1D48_RS21400 PF01625 Peptide methionine sulfoxide reductase A1D48_RS21405 PF03471 Transporter associated domain A1D48_RS21405 PF01595 Cyclin M transmembrane N-terminal domain A1D48_RS21405 PF00571 CBS domain A1D48_RS21410 PF06526 Protein of unknown function (DUF1107) A1D48_RS21420 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) A1D48_RS21425 PF00459 Inositol monophosphatase family A1D48_RS21435 PF02872 5'-nucleotidase, C-terminal domain A1D48_RS21435 PF00149 Calcineurin-like phosphoesterase A1D48_RS21440 PF01638 HxlR-like helix-turn-helix A1D48_RS21445 PF05368 NmrA-like family A1D48_RS21450 PF00892 EamA-like transporter family A1D48_RS21455 PF01814 Hemerythrin HHE cation binding domain A1D48_RS21455 PF04405 Domain of Unknown function (DUF542) A1D48_RS21460 PF00324 Amino acid permease A1D48_RS21465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A1D48_RS21465 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A1D48_RS21475 PF04225 Opacity-associated protein A LysM-like domain A1D48_RS21475 PF08525 Opacity-associated protein A N-terminal motif A1D48_RS21485 PF03948 Ribosomal protein L9, C-terminal domain A1D48_RS21485 PF01281 Ribosomal protein L9, N-terminal domain A1D48_RS21490 PF01084 Ribosomal protein S18 A1D48_RS21495 PF00436 Single-strand binding protein family A1D48_RS21500 PF01250 Ribosomal protein S6 A1D48_RS21505 PF07338 Protein of unknown function (DUF1471) A1D48_RS21510 PF07274 Protein of unknown function (DUF1440) A1D48_RS21515 PF00596 Class II Aldolase and Adducin N-terminal domain A1D48_RS21520 PF01261 Xylose isomerase-like TIM barrel A1D48_RS21525 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A1D48_RS21535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A1D48_RS21540 PF03611 PTS system sugar-specific permease component A1D48_RS21550 PF00455 DeoR C terminal sensor domain A1D48_RS21550 PF08220 DeoR-like helix-turn-helix domain A1D48_RS21555 PF00326 Prolyl oligopeptidase family A1D48_RS21560 PF07338 Protein of unknown function (DUF1471) A1D48_RS21565 PF07338 Protein of unknown function (DUF1471) A1D48_RS21570 PF18158 Adaptive response protein AidB N-terminal domain A1D48_RS21570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A1D48_RS21570 PF02770 Acyl-CoA dehydrogenase, middle domain A1D48_RS21575 PF03738 Glutathionylspermidine synthase preATP-grasp A1D48_RS21580 PF06693 Protein of unknown function (DUF1190) A1D48_RS21585 PF03994 Domain of Unknown Function (DUF350) A1D48_RS21590 PF10679 Protein of unknown function (DUF2491) A1D48_RS21600 PF04012 PspA/IM30 family A1D48_RS21605 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) A1D48_RS21610 PF00588 SpoU rRNA Methylase family A1D48_RS21610 PF08032 RNA 2'-O ribose methyltransferase substrate binding A1D48_RS21615 PF00575 S1 RNA binding domain A1D48_RS21615 PF00773 RNB domain A1D48_RS21615 PF08206 Ribonuclease B OB domain A1D48_RS21615 PF17876 Cold shock domain A1D48_RS21615 PF08461 Ribonuclease R winged-helix domain A1D48_RS21620 PF02082 Transcriptional regulator A1D48_RS21625 PF00709 Adenylosuccinate synthetase A1D48_RS21630 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) A1D48_RS21635 PF01145 SPFH domain / Band 7 family A1D48_RS21640 PF01145 SPFH domain / Band 7 family A1D48_RS21640 PF12221 Bacterial membrane protein N terminal A1D48_RS21645 PF16360 GTP-binding GTPase Middle Region A1D48_RS21645 PF13167 GTP-binding GTPase N-terminal A1D48_RS21645 PF01926 50S ribosome-binding GTPase A1D48_RS21650 PF17209 Hfq protein A1D48_RS21660 PF01119 DNA mismatch repair protein, C-terminal domain A1D48_RS21660 PF08676 MutL C terminal dimerisation domain A1D48_RS21665 PF01520 N-acetylmuramoyl-L-alanine amidase A1D48_RS21670 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A1D48_RS21675 PF01256 Carbohydrate kinase A1D48_RS21675 PF03853 YjeF-related protein N-terminus A1D48_RS21680 PF08331 Domain of unknown function (DUF1730) A1D48_RS21700 PF00497 Bacterial extracellular solute-binding proteins, family 3 A1D48_RS21705 PF00929 Exonuclease A1D48_RS21710 PF03193 RsgA GTPase A1D48_RS21715 PF02666 Phosphatidylserine decarboxylase A1D48_RS21720 PF12794 Mechanosensitive ion channel inner membrane domain 1 A1D48_RS21720 PF12795 Mechanosensitive ion channel porin domain A1D48_RS21720 PF00924 Mechanosensitive ion channel A1D48_RS21725 PF10840 Protein of unknown function (DUF2645) A1D48_RS21730 PF13520 Amino acid permease A1D48_RS21735 PF00152 tRNA synthetases class II (D, K and N) A1D48_RS21740 PF00890 FAD binding domain A1D48_RS21740 PF02910 Fumarate reductase flavoprotein C-term A1D48_RS21745 PF13085 2Fe-2S iron-sulfur cluster binding domain A1D48_RS21745 PF13183 4Fe-4S dicluster domain A1D48_RS21750 PF02300 Fumarate reductase subunit C A1D48_RS21755 PF02313 Fumarate reductase subunit D A1D48_RS21760 PF08212 Lipocalin-like domain A1D48_RS21765 PF00893 Small Multidrug Resistance protein A1D48_RS21770 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS21775 PF08085 Entericidin EcnA/B family A1D48_RS21785 PF08085 Entericidin EcnA/B family A1D48_RS21790 PF09285 Elongation factor P, C-terminal A1D48_RS21790 PF01132 Elongation factor P (EF-P) OB domain A1D48_RS21790 PF08207 Elongation factor P (EF-P) KOW-like domain A1D48_RS21795 PF04055 Radical SAM superfamily A1D48_RS21800 PF15922 YjeJ-like A1D48_RS21805 PF13698 Domain of unknown function (DUF4156) A1D48_RS21810 PF00118 TCP-1/cpn60 chaperonin family A1D48_RS21815 PF00166 Chaperonin 10 Kd subunit A1D48_RS21820 PF13520 Amino acid permease A1D48_RS21825 PF04186 FxsA cytoplasmic membrane protein A1D48_RS21830 PF10415 Fumarase C C-terminus A1D48_RS21830 PF00206 Lyase A1D48_RS21835 PF03605 Anaerobic c4-dicarboxylate membrane transporter A1D48_RS21840 PF03091 CutA1 divalent ion tolerance protein A1D48_RS21845 PF11412 Disulphide bond corrector protein DsbC A1D48_RS21845 PF02683 Cytochrome C biogenesis protein transmembrane region A1D48_RS21870 PF00874 PRD domain A1D48_RS21870 PF00158 Sigma-54 interaction domain A1D48_RS21870 PF03610 PTS system fructose IIA component A1D48_RS21875 PF00834 Ribulose-phosphate 3 epimerase family A1D48_RS21880 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS21880 PF00107 Zinc-binding dehydrogenase A1D48_RS21885 PF01380 SIS domain A1D48_RS21890 PF00107 Zinc-binding dehydrogenase A1D48_RS21890 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS21895 PF03613 PTS system mannose/fructose/sorbose family IID component A1D48_RS21905 PF03830 PTS system sorbose subfamily IIB component A1D48_RS21910 PF03830 PTS system sorbose subfamily IIB component A1D48_RS21910 PF03610 PTS system fructose IIA component A1D48_RS21920 PF01569 PAP2 superfamily A1D48_RS21950 PF12833 Helix-turn-helix domain A1D48_RS21955 PF00196 Bacterial regulatory proteins, luxR family A1D48_RS21955 PF00072 Response regulator receiver domain A1D48_RS21960 PF09383 NIL domain A1D48_RS21960 PF00005 ABC transporter A1D48_RS21975 PF06977 SdiA-regulated A1D48_RS21985 PF02613 Nitrate reductase delta subunit A1D48_RS21990 PF04976 DMSO reductase anchor subunit (DmsC) A1D48_RS21995 PF12800 4Fe-4S binding domain A1D48_RS21995 PF13247 4Fe-4S dicluster domain A1D48_RS22000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A1D48_RS22000 PF01568 Molydopterin dinucleotide binding domain A1D48_RS22000 PF00384 Molybdopterin oxidoreductase A1D48_RS22005 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A1D48_RS22005 PF17203 Single cache domain 3 A1D48_RS22005 PF00989 PAS fold A1D48_RS22005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS22010 PF00072 Response regulator receiver domain A1D48_RS22020 PF03605 Anaerobic c4-dicarboxylate membrane transporter A1D48_RS22025 PF05683 Fumarase C-terminus A1D48_RS22025 PF05681 Fumarate hydratase (Fumerase) A1D48_RS22035 PF11975 Family 4 glycosyl hydrolase C-terminal domain A1D48_RS22035 PF02056 Family 4 glycosyl hydrolase A1D48_RS22040 PF12833 Helix-turn-helix domain A1D48_RS22045 PF01276 Orn/Lys/Arg decarboxylase, major domain A1D48_RS22045 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A1D48_RS22045 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A1D48_RS22050 PF12833 Helix-turn-helix domain A1D48_RS22055 PF13520 Amino acid permease A1D48_RS22060 PF08019 Phosphoethanolamine transferase EptA/EptB A1D48_RS22060 PF00884 Sulfatase A1D48_RS22065 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS22065 PF00072 Response regulator receiver domain A1D48_RS22070 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS22070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS22080 PF08946 Osmosensory transporter coiled coil A1D48_RS22080 PF00083 Sugar (and other) transporter A1D48_RS22085 PF03831 PhnA domain A1D48_RS22085 PF08274 PhnA Zinc-Ribbon A1D48_RS22090 PF06983 3-demethylubiquinone-9 3-methyltransferase A1D48_RS22095 PF00583 Acetyltransferase (GNAT) family A1D48_RS22110 PF08238 Sel1 repeat A1D48_RS22115 PF00375 Sodium:dicarboxylate symporter family A1D48_RS22125 PF03918 Cytochrome C biogenesis protein A1D48_RS22130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A1D48_RS22130 PF01578 Cytochrome C assembly protein A1D48_RS22135 PF03916 Polysulphide reductase, NrfD A1D48_RS22140 PF13247 4Fe-4S dicluster domain A1D48_RS22140 PF00037 4Fe-4S binding domain A1D48_RS22145 PF13435 Cytochrome c554 and c-prime A1D48_RS22145 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) A1D48_RS22150 PF02335 Cytochrome c552 A1D48_RS22160 PF00501 AMP-binding enzyme A1D48_RS22160 PF16177 Acetyl-coenzyme A synthetase N-terminus A1D48_RS22160 PF13193 AMP-binding enzyme C-terminal domain A1D48_RS22165 PF04341 Protein of unknown function, DUF485 A1D48_RS22170 PF00474 Sodium:solute symporter family A1D48_RS22175 PF04172 LrgB-like family A1D48_RS22180 PF03788 LrgA family A1D48_RS22185 PF03466 LysR substrate binding domain A1D48_RS22185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS22190 PF00999 Sodium/hydrogen exchanger family A1D48_RS22200 PF00860 Permease family A1D48_RS22215 PF00376 MerR family regulatory protein A1D48_RS22215 PF09278 MerR, DNA binding A1D48_RS22220 PF12833 Helix-turn-helix domain A1D48_RS22225 PF00563 EAL domain A1D48_RS22225 PF12792 CSS motif domain associated with EAL A1D48_RS22230 PF15940 Family of unknown function A1D48_RS22235 PF00005 ABC transporter A1D48_RS22235 PF00664 ABC transporter transmembrane region A1D48_RS22275 PF00436 Single-strand binding protein family A1D48_RS22285 PF17760 UvrA interaction domain A1D48_RS22285 PF00005 ABC transporter A1D48_RS22285 PF17755 UvrA DNA-binding domain A1D48_RS22300 PF04237 YjbR A1D48_RS22305 PF01894 Uncharacterised protein family UPF0047 A1D48_RS22310 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) A1D48_RS22320 PF00155 Aminotransferase class I and II A1D48_RS22325 PF00842 Alanine racemase, C-terminal domain A1D48_RS22325 PF01168 Alanine racemase, N-terminal domain A1D48_RS22330 PF03796 DnaB-like helicase C terminal domain A1D48_RS22330 PF00772 DnaB-like helicase N terminal domain A1D48_RS22335 PF08240 Alcohol dehydrogenase GroES-like domain A1D48_RS22335 PF00107 Zinc-binding dehydrogenase A1D48_RS22340 PF09583 Phage shock protein G (Phageshock_PspG) A1D48_RS22345 PF01207 Dihydrouridine synthase (Dus) A1D48_RS22355 PF01475 Ferric uptake regulator family A1D48_RS22360 PF05532 CsbD-like A1D48_RS22370 PF01554 MatE A1D48_RS22375 PF00717 Peptidase S24-like A1D48_RS22375 PF01726 LexA DNA binding domain A1D48_RS22380 PF01219 Prokaryotic diacylglycerol kinase A1D48_RS22385 PF01553 Acyltransferase A1D48_RS22390 PF01040 UbiA prenyltransferase family A1D48_RS22395 PF04345 Chorismate lyase A1D48_RS22400 PF07148 Maltose operon periplasmic protein precursor (MalM) A1D48_RS22405 PF02264 LamB porin A1D48_RS22410 PF17912 MalK OB fold domain A1D48_RS22410 PF00005 ABC transporter A1D48_RS22415 PF01547 Bacterial extracellular solute-binding protein A1D48_RS22420 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS22420 PF14785 Maltose transport system permease protein MalF P2 domain A1D48_RS22425 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS22430 PF06146 Phosphate-starvation-inducible E A1D48_RS22435 PF06082 Exopolysaccharide biosynthesis protein YbjH A1D48_RS22440 PF06251 Capsule biosynthesis GfcC A1D48_RS22445 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF A1D48_RS22455 PF00342 Phosphoglucose isomerase A1D48_RS22460 PF01842 ACT domain A1D48_RS22460 PF00696 Amino acid kinase family A1D48_RS22465 PF08765 Mor transcription activator family A1D48_RS22540 PF04138 GtrA-like protein A1D48_RS22545 PF00535 Glycosyl transferase family 2 A1D48_RS22570 PF03335 Phage tail fibre repeat A1D48_RS22570 PF07484 Phage Tail Collar Domain A1D48_RS22575 PF02413 Caudovirales tail fibre assembly protein, lambda gpK A1D48_RS22595 PF01758 Sodium Bile acid symporter family A1D48_RS22600 PF11656 YjbD family (DUF3811) A1D48_RS22605 PF01479 S4 domain A1D48_RS22605 PF00849 RNA pseudouridylate synthase A1D48_RS22610 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) A1D48_RS22620 PF03575 Peptidase family S51 A1D48_RS22625 PF02690 Na+/Pi-cotransporter A1D48_RS22630 PF02310 B12 binding domain A1D48_RS22630 PF02607 B12 binding domain A1D48_RS22630 PF02574 Homocysteine S-methyltransferase A1D48_RS22630 PF02965 Vitamin B12 dependent methionine synthase, activation domain A1D48_RS22630 PF00809 Pterin binding enzyme A1D48_RS22635 PF01614 Bacterial transcriptional regulator A1D48_RS22635 PF09339 IclR helix-turn-helix domain A1D48_RS22645 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) A1D48_RS22650 PF00463 Isocitrate lyase family A1D48_RS22655 PF01274 Malate synthase A1D48_RS22660 PF04204 Homoserine O-succinyltransferase A1D48_RS22665 PF13673 Acetyltransferase (GNAT) domain A1D48_RS22690 PF02142 MGS-like domain A1D48_RS22690 PF01808 AICARFT/IMPCHase bienzyme A1D48_RS22695 PF02844 Phosphoribosylglycinamide synthetase, N domain A1D48_RS22695 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A1D48_RS22695 PF02843 Phosphoribosylglycinamide synthetase, C domain A1D48_RS22700 PF02954 Bacterial regulatory protein, Fis family A1D48_RS22700 PF00158 Sigma-54 interaction domain A1D48_RS22700 PF00072 Response regulator receiver domain A1D48_RS22705 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS22705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS22710 PF13801 Heavy-metal resistance A1D48_RS22715 PF07356 Protein of unknown function (DUF1481) A1D48_RS22720 PF00216 Bacterial DNA-binding protein A1D48_RS22725 PF04222 Protein of unknown function (DUF416) A1D48_RS22735 PF01208 Uroporphyrinogen decarboxylase (URO-D) A1D48_RS22740 PF09297 NADH pyrophosphatase zinc ribbon domain A1D48_RS22740 PF00293 NUDIX domain A1D48_RS22745 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ A1D48_RS22750 PF13667 ThiC-associated domain A1D48_RS22750 PF01964 Radical SAM ThiC family A1D48_RS22755 PF02581 Thiamine monophosphate synthase A1D48_RS22760 PF00899 ThiF family A1D48_RS22765 PF02597 ThiS family A1D48_RS22770 PF05690 Thiazole biosynthesis protein ThiG A1D48_RS22775 PF04055 Radical SAM superfamily A1D48_RS22775 PF06968 Biotin and Thiamin Synthesis associated domain A1D48_RS22800 PF05000 RNA polymerase Rpb1, domain 4 A1D48_RS22800 PF04998 RNA polymerase Rpb1, domain 5 A1D48_RS22800 PF00623 RNA polymerase Rpb1, domain 2 A1D48_RS22800 PF04997 RNA polymerase Rpb1, domain 1 A1D48_RS22800 PF04983 RNA polymerase Rpb1, domain 3 A1D48_RS22805 PF04560 RNA polymerase Rpb2, domain 7 A1D48_RS22805 PF04563 RNA polymerase beta subunit A1D48_RS22805 PF00562 RNA polymerase Rpb2, domain 6 A1D48_RS22805 PF04561 RNA polymerase Rpb2, domain 2 A1D48_RS22805 PF10385 RNA polymerase beta subunit external 1 domain A1D48_RS22805 PF04565 RNA polymerase Rpb2, domain 3 A1D48_RS22810 PF00542 Ribosomal protein L7/L12 C-terminal domain A1D48_RS22810 PF16320 Ribosomal protein L7/L12 dimerisation domain A1D48_RS22815 PF00466 Ribosomal protein L10 A1D48_RS22825 PF00687 Ribosomal protein L1p/L10e family A1D48_RS22830 PF00298 Ribosomal protein L11, RNA binding domain A1D48_RS22830 PF03946 Ribosomal protein L11, N-terminal domain A1D48_RS22835 PF02357 Transcription termination factor nusG A1D48_RS22835 PF00467 KOW motif A1D48_RS22840 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A1D48_RS22845 PF03144 Elongation factor Tu domain 2 A1D48_RS22845 PF00009 Elongation factor Tu GTP binding domain A1D48_RS22845 PF03143 Elongation factor Tu C-terminal domain A1D48_RS22880 PF00485 Phosphoribulokinase / Uridine kinase family A1D48_RS22885 PF03099 Biotin/lipoate A/B protein ligase family A1D48_RS22885 PF08279 HTH domain A1D48_RS22885 PF02237 Biotin protein ligase C terminal domain A1D48_RS22890 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A1D48_RS22890 PF01565 FAD binding domain A1D48_RS22920 PF01177 Asp/Glu/Hydantoin racemase A1D48_RS22925 PF00593 TonB dependent receptor A1D48_RS22925 PF07715 TonB-dependent Receptor Plug Domain A1D48_RS22930 PF05958 tRNA (Uracil-5-)-methyltransferase A1D48_RS22935 PF07226 Protein of unknown function (DUF1422) A1D48_RS22940 PF00440 Bacterial regulatory proteins, tetR family A1D48_RS22950 PF07992 Pyridine nucleotide-disulphide oxidoreductase A1D48_RS22950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A1D48_RS22955 PF03466 LysR substrate binding domain A1D48_RS22955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS22965 PF14698 Argininosuccinate lyase C-terminal A1D48_RS22965 PF00206 Lyase A1D48_RS22970 PF00696 Amino acid kinase family A1D48_RS22975 PF02774 Semialdehyde dehydrogenase, dimerisation domain A1D48_RS22975 PF01118 Semialdehyde dehydrogenase, NAD binding domain A1D48_RS22980 PF01546 Peptidase family M20/M25/M40 A1D48_RS22980 PF07687 Peptidase dimerisation domain A1D48_RS22990 PF00311 Phosphoenolpyruvate carboxylase A1D48_RS22995 PF00884 Sulfatase A1D48_RS23000 PF12833 Helix-turn-helix domain A1D48_RS23005 PF00923 Transaldolase/Fructose-6-phosphate aldolase A1D48_RS23010 PF00465 Iron-containing alcohol dehydrogenase A1D48_RS23015 PF06940 Domain of unknown function (DUF1287) A1D48_RS23020 PF00141 Peroxidase A1D48_RS23025 PF02219 Methylenetetrahydrofolate reductase A1D48_RS23030 PF00149 Calcineurin-like phosphoesterase A1D48_RS23030 PF02872 5'-nucleotidase, C-terminal domain A1D48_RS23030 PF17936 Bacterial Ig domain A1D48_RS23045 PF05552 Conserved TM helix A1D48_RS23045 PF00924 Mechanosensitive ion channel A1D48_RS23050 PF00696 Amino acid kinase family A1D48_RS23050 PF00742 Homoserine dehydrogenase A1D48_RS23050 PF03447 Homoserine dehydrogenase, NAD binding domain A1D48_RS23055 PF01053 Cys/Met metabolism PLP-dependent enzyme A1D48_RS23060 PF01340 Met Apo-repressor, MetJ A1D48_RS23065 PF05935 Arylsulfotransferase (ASST) A1D48_RS23065 PF17425 Arylsulfotransferase Ig-like domain A1D48_RS23075 PF03527 RHS protein A1D48_RS23075 PF14220 Domain of unknown function (DUF4329) A1D48_RS23075 PF05593 RHS Repeat A1D48_RS23080 PF01197 Ribosomal protein L31 A1D48_RS23085 PF00270 DEAD/DEAH box helicase A1D48_RS23085 PF00271 Helicase conserved C-terminal domain A1D48_RS23085 PF17764 3′ DNA-binding domain (3′BD) A1D48_RS23085 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A1D48_RS23085 PF18074 Primosomal protein N C-terminal domain A1D48_RS23090 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS23095 PF05036 Sporulation related domain A1D48_RS23100 PF00227 Proteasome subunit A1D48_RS23105 PF00004 ATPase family associated with various cellular activities (AAA) A1D48_RS23105 PF10431 C-terminal, D2-small domain, of ClpB protein A1D48_RS23105 PF07724 AAA domain (Cdc48 subfamily) A1D48_RS23110 PF01040 UbiA prenyltransferase family A1D48_RS23115 PF03737 Aldolase/RraA A1D48_RS23120 PF06005 Cell division protein ZapB A1D48_RS23125 PF00230 Major intrinsic protein A1D48_RS23130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A1D48_RS23130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A1D48_RS23135 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A1D48_RS23140 PF00175 Oxidoreductase NAD-binding domain A1D48_RS23140 PF00970 Oxidoreductase FAD-binding domain A1D48_RS23145 PF05656 Protein of unknown function (DUF805) A1D48_RS23150 PF07305 Protein of unknown function (DUF1454) A1D48_RS23155 PF00121 Triosephosphate isomerase A1D48_RS23160 PF00834 Ribulose-phosphate 3 epimerase family A1D48_RS23165 PF03992 Antibiotic biosynthesis monooxygenase A1D48_RS23170 PF01791 DeoC/LacD family aldolase A1D48_RS23175 PF13407 Periplasmic binding protein domain A1D48_RS23180 PF02653 Branched-chain amino acid transport system / permease component A1D48_RS23185 PF02653 Branched-chain amino acid transport system / permease component A1D48_RS23190 PF00005 ABC transporter A1D48_RS23195 PF04198 Putative sugar-binding domain A1D48_RS23200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A1D48_RS23200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A1D48_RS23220 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS23220 PF00155 Aminotransferase class I and II A1D48_RS23230 PF00294 pfkB family carbohydrate kinase A1D48_RS23240 PF02611 CDP-diacylglycerol pyrophosphatase A1D48_RS23250 PF00365 Phosphofructokinase A1D48_RS23255 PF16916 Dimerisation domain of Zinc Transporter A1D48_RS23255 PF01545 Cation efflux family A1D48_RS23260 PF07813 LTXXQ motif family protein A1D48_RS23265 PF00486 Transcriptional regulatory protein, C terminal A1D48_RS23265 PF00072 Response regulator receiver domain A1D48_RS23270 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS23270 PF00672 HAMP domain A1D48_RS23270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS23270 PF16527 Two-component sensor protein CpxA, periplasmic domain A1D48_RS23285 PF03473 MOSC domain A1D48_RS23285 PF03475 3-alpha domain A1D48_RS23290 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A1D48_RS23290 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A1D48_RS23295 PF03480 Bacterial extracellular solute-binding protein, family 7 A1D48_RS23300 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component A1D48_RS23305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A1D48_RS23310 PF06178 Oligogalacturonate-specific porin protein (KdgM) A1D48_RS23315 PF06379 L-rhamnose-proton symport protein (RhaT) A1D48_RS23320 PF02311 AraC-like ligand binding domain A1D48_RS23320 PF12833 Helix-turn-helix domain A1D48_RS23330 PF02311 AraC-like ligand binding domain A1D48_RS23330 PF12833 Helix-turn-helix domain A1D48_RS23335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A1D48_RS23335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A1D48_RS23340 PF06134 L-rhamnose isomerase (RhaA) A1D48_RS23345 PF00596 Class II Aldolase and Adducin N-terminal domain A1D48_RS23350 PF00465 Iron-containing alcohol dehydrogenase A1D48_RS23355 PF05336 L-rhamnose mutarotase A1D48_RS23365 PF03591 AzlC protein A1D48_RS23375 PF12889 Protein of unknown function (DUF3829) A1D48_RS23380 PF12889 Protein of unknown function (DUF3829) A1D48_RS23385 PF02634 FdhD/NarQ family A1D48_RS23400 PF09163 Formate dehydrogenase N, transmembrane A1D48_RS23400 PF13247 4Fe-4S dicluster domain A1D48_RS23405 PF01292 Prokaryotic cytochrome b561 A1D48_RS23410 PF04216 Protein involved in formate dehydrogenase formation A1D48_RS23420 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system A1D48_RS23425 PF07859 alpha/beta hydrolase fold A1D48_RS23430 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system A1D48_RS23435 PF01381 Helix-turn-helix A1D48_RS23440 PF00583 Acetyltransferase (GNAT) family A1D48_RS23440 PF09500 Putative thioesterase (yiiD_Cterm) A1D48_RS23445 PF02580 D-Tyr-tRNA(Tyr) deacylase A1D48_RS23450 PF03631 Virulence factor BrkB A1D48_RS23455 PF13419 Haloacid dehalogenase-like hydrolase A1D48_RS23460 PF08220 DeoR-like helix-turn-helix domain A1D48_RS23460 PF00455 DeoR C terminal sensor domain A1D48_RS23465 PF00294 pfkB family carbohydrate kinase A1D48_RS23470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A1D48_RS23470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A1D48_RS23475 PF01791 DeoC/LacD family aldolase A1D48_RS23485 PF01263 Aldose 1-epimerase A1D48_RS23490 PF01055 Glycosyl hydrolases family 31 A1D48_RS23505 PF06178 Oligogalacturonate-specific porin protein (KdgM) A1D48_RS23525 PF04055 Radical SAM superfamily A1D48_RS23540 PF03144 Elongation factor Tu domain 2 A1D48_RS23540 PF00009 Elongation factor Tu GTP binding domain A1D48_RS23540 PF00679 Elongation factor G C-terminus A1D48_RS23550 PF00120 Glutamine synthetase, catalytic domain A1D48_RS23550 PF03951 Glutamine synthetase, beta-Grasp domain A1D48_RS23560 PF00989 PAS fold A1D48_RS23560 PF00512 His Kinase A (phospho-acceptor) domain A1D48_RS23560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A1D48_RS23565 PF02954 Bacterial regulatory protein, Fis family A1D48_RS23565 PF00072 Response regulator receiver domain A1D48_RS23565 PF00158 Sigma-54 interaction domain A1D48_RS23575 PF04055 Radical SAM superfamily A1D48_RS23575 PF06969 HemN C-terminal domain A1D48_RS23580 PF04220 Der GTPase activator (YihI) A1D48_RS23590 PF01926 50S ribosome-binding GTPase A1D48_RS23595 PF01612 3'-5' exonuclease A1D48_RS23595 PF00476 DNA polymerase family A A1D48_RS23595 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A1D48_RS23595 PF01367 5'-3' exonuclease, C-terminal SAM fold A1D48_RS23605 PF01553 Acyltransferase A1D48_RS23610 PF01323 DSBA-like thioredoxin domain A1D48_RS23615 PF01636 Phosphotransferase enzyme family A1D48_RS23620 PF06288 Protein of unknown function (DUF1040) A1D48_RS23625 PF12804 MobA-like NTP transferase domain A1D48_RS23630 PF03205 Molybdopterin guanine dinucleotide synthesis protein B A1D48_RS23665 PF12724 Flavodoxin domain A1D48_RS23670 PF02386 Cation transport protein A1D48_RS23675 PF01205 Uncharacterized protein family UPF0029 A1D48_RS23675 PF09186 Domain of unknown function (DUF1949) A1D48_RS23680 PF00557 Metallopeptidase family M24 A1D48_RS23685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A1D48_RS23685 PF00378 Enoyl-CoA hydratase/isomerase A1D48_RS23685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A1D48_RS23690 PF00108 Thiolase, N-terminal domain A1D48_RS23690 PF02803 Thiolase, C-terminal domain A1D48_RS23695 PF05935 Arylsulfotransferase (ASST) A1D48_RS23695 PF17425 Arylsulfotransferase Ig-like domain A1D48_RS23700 PF00970 Oxidoreductase FAD-binding domain A1D48_RS23700 PF00175 Oxidoreductase NAD-binding domain A1D48_RS23705 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A1D48_RS23710 PF02357 Transcription termination factor nusG A1D48_RS23715 PF01026 TatD related DNase A1D48_RS23720 PF00902 Sec-independent protein translocase protein (TatC) A1D48_RS23730 PF02416 mttA/Hcf106 family A1D48_RS23735 PF03109 ABC1 family A1D48_RS23740 PF02036 SCP-2 sterol transfer family A1D48_RS23745 PF01209 ubiE/COQ5 methyltransferase family A1D48_RS23750 PF02646 RmuC family A1D48_RS23755 PF01048 Phosphorylase superfamily A1D48_RS23760 PF01738 Dienelactone hydrolase family A1D48_RS23765 PF13186 Iron-sulfur cluster-binding domain A1D48_RS23765 PF04055 Radical SAM superfamily A1D48_RS23770 PF08267 Cobalamin-independent synthase, N-terminal domain A1D48_RS23770 PF01717 Cobalamin-independent synthase, Catalytic domain A1D48_RS23775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS23775 PF03466 LysR substrate binding domain A1D48_RS23780 PF00892 EamA-like transporter family A1D48_RS23790 PF12146 Serine aminopeptidase, S33 A1D48_RS23795 PF01810 LysE type translocator A1D48_RS23800 PF01810 LysE type translocator A1D48_RS23805 PF09382 RQC domain A1D48_RS23805 PF16124 RecQ zinc-binding A1D48_RS23805 PF00271 Helicase conserved C-terminal domain A1D48_RS23805 PF00270 DEAD/DEAH box helicase A1D48_RS23805 PF00570 HRDC domain A1D48_RS23810 PF02253 Phospholipase A1 A1D48_RS23815 PF03061 Thioesterase superfamily A1D48_RS23820 PF00892 EamA-like transporter family A1D48_RS23830 PF10947 Protein of unknown function (DUF2628) A1D48_RS23835 PF01544 CorA-like Mg2+ transporter protein A1D48_RS23845 PF13361 UvrD-like helicase C-terminal domain A1D48_RS23845 PF00580 UvrD/REP helicase N-terminal domain A1D48_RS23850 PF13419 Haloacid dehalogenase-like hydrolase A1D48_RS23855 PF02899 Phage integrase, N-terminal SAM-like domain A1D48_RS23855 PF00589 Phage integrase family A1D48_RS23860 PF04340 Protein of unknown function, DUF484 A1D48_RS23865 PF01678 Diaminopimelate epimerase A1D48_RS23870 PF13627 Prokaryotic lipoprotein-attachment site A1D48_RS23890 PF01491 Frataxin-like domain A1D48_RS23910 PF12633 Adenylate cyclase NT domain A1D48_RS23910 PF01295 Adenylate cyclase, class-I A1D48_RS23915 PF03900 Porphobilinogen deaminase, C-terminal domain A1D48_RS23915 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A1D48_RS23920 PF02602 Uroporphyrinogen-III synthase HemD A1D48_RS23925 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase A1D48_RS23930 PF07719 Tetratricopeptide repeat A1D48_RS23930 PF07219 HemY protein N-terminus A1D48_RS23955 PF00324 Amino acid permease A1D48_RS23960 PF03808 Glycosyl transferase WecB/TagA/CpsF family A1D48_RS23965 PF06899 WzyE protein, O-antigen assembly polymerase A1D48_RS23970 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 A1D48_RS23975 PF01943 Polysaccharide biosynthesis protein A1D48_RS23980 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A1D48_RS23990 PF00483 Nucleotidyl transferase A1D48_RS23990 PF00483 Nucleotidyl transferase A1D48_RS23995 PF16363 GDP-mannose 4,6 dehydratase A1D48_RS24000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A1D48_RS24000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A1D48_RS24000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A1D48_RS24005 PF02350 UDP-N-acetylglucosamine 2-epimerase A1D48_RS24010 PF02706 Chain length determinant protein A1D48_RS24015 PF00953 Glycosyl transferase family 4 A1D48_RS24020 PF07497 Rho termination factor, RNA-binding domain A1D48_RS24020 PF07498 Rho termination factor, N-terminal domain A1D48_RS24020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A1D48_RS24030 PF00085 Thioredoxin A1D48_RS24035 PF00271 Helicase conserved C-terminal domain A1D48_RS24035 PF00270 DEAD/DEAH box helicase A1D48_RS24045 PF02541 Ppx/GppA phosphatase family A1D48_RS24050 PF13361 UvrD-like helicase C-terminal domain A1D48_RS24050 PF00580 UvrD/REP helicase N-terminal domain A1D48_RS24055 PF04973 Nicotinamide mononucleotide transporter A1D48_RS24060 PF01048 Phosphorylase superfamily A1D48_RS24075 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A1D48_RS24075 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A1D48_RS24080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS24080 PF03466 LysR substrate binding domain A1D48_RS24095 PF00291 Pyridoxal-phosphate dependent enzyme A1D48_RS24095 PF00585 C-terminal regulatory domain of Threonine dehydratase A1D48_RS24100 PF00920 Dehydratase family A1D48_RS24105 PF01063 Amino-transferase class IV A1D48_RS24115 PF00205 Thiamine pyrophosphate enzyme, central domain A1D48_RS24115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A1D48_RS24115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A1D48_RS24120 PF08046 IlvGEDA operon leader peptide A1D48_RS24125 PF01078 Magnesium chelatase, subunit ChlI A1D48_RS24125 PF13335 Magnesium chelatase, subunit ChlI C-terminal A1D48_RS24130 PF04219 Protein of unknown function, DUF A1D48_RS24135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS24135 PF03466 LysR substrate binding domain A1D48_RS24170 PF07729 FCD domain A1D48_RS24170 PF00392 Bacterial regulatory proteins, gntR family A1D48_RS24175 PF07690 Major Facilitator Superfamily A1D48_RS24180 PF00356 Bacterial regulatory proteins, lacI family A1D48_RS24185 PF00294 pfkB family carbohydrate kinase A1D48_RS24190 PF13407 Periplasmic binding protein domain A1D48_RS24195 PF02653 Branched-chain amino acid transport system / permease component A1D48_RS24200 PF00005 ABC transporter A1D48_RS24205 PF05025 RbsD / FucU transport protein family A1D48_RS24210 PF02705 K+ potassium transporter A1D48_RS24215 PF07728 AAA domain (dynein-related subfamily) A1D48_RS24215 PF17868 AAA lid domain A1D48_RS24215 PF12592 Protein of unknown function (DUF3763) A1D48_RS24220 PF05762 VWA domain containing CoxE-like protein A1D48_RS24225 PF03590 Aspartate-ammonia ligase A1D48_RS24230 PF01037 Lrp/AsnC ligand binding domain A1D48_RS24235 PF00258 Flavodoxin A1D48_RS24245 PF13932 GidA associated domain A1D48_RS24245 PF01134 Glucose inhibited division protein A A1D48_RS24250 PF02527 rRNA small subunit methyltransferase G A1D48_RS24255 PF03899 ATP synthase I chain A1D48_RS24260 PF00119 ATP synthase A chain A1D48_RS24265 PF00137 ATP synthase subunit C A1D48_RS24270 PF00430 ATP synthase B/B' CF(0) A1D48_RS24275 PF00213 ATP synthase delta (OSCP) subunit A1D48_RS24280 PF00306 ATP synthase alpha/beta chain, C terminal domain A1D48_RS24280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A1D48_RS24280 PF02874 ATP synthase alpha/beta family, beta-barrel domain A1D48_RS24285 PF00231 ATP synthase A1D48_RS24290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A1D48_RS24290 PF02874 ATP synthase alpha/beta family, beta-barrel domain A1D48_RS24295 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A1D48_RS24295 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A1D48_RS24310 PF12804 MobA-like NTP transferase domain A1D48_RS24310 PF00132 Bacterial transferase hexapeptide (six repeats) A1D48_RS24315 PF01380 SIS domain A1D48_RS24320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A1D48_RS24320 PF12793 Sugar transport-related sRNA regulator N-term A1D48_RS24325 PF08501 Shikimate dehydrogenase substrate binding domain A1D48_RS24330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A1D48_RS24330 PF02378 Phosphotransferase system, EIIC A1D48_RS24335 PF12849 PBP superfamily domain A1D48_RS24340 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS24345 PF00528 Binding-protein-dependent transport system inner membrane component A1D48_RS24350 PF00005 ABC transporter A1D48_RS24355 PF01895 PhoU domain A1D48_RS24360 PF13419 Haloacid dehalogenase-like hydrolase A1D48_RS24370 PF00860 Permease family A1D48_RS24375 PF03358 NADPH-dependent FMN reductase A1D48_RS24385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A1D48_RS24385 PF03466 LysR substrate binding domain A1D48_RS24390 PF07690 Major Facilitator Superfamily A1D48_RS24400 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A1D48_RS24420 PF10396 GTP-binding protein TrmE N-terminus A1D48_RS24420 PF12631 MnmE helical domain A1D48_RS24420 PF01926 50S ribosome-binding GTPase A1D48_RS24425 PF02096 60Kd inner membrane protein A1D48_RS24425 PF14849 YidC periplasmic domain A1D48_RS24430 PF01809 Putative membrane protein insertion efficiency factor A1D48_RS24435 PF00825 Ribonuclease P A1D48_RS24440 PF00468 Ribosomal protein L34 A1D48_RS24480 PF00589 Phage integrase family A1D48_RS24480 PF13356 Arm DNA-binding domain A1D48_RS24505 PF03527 RHS protein A1D48_RS24505 PF05593 RHS Repeat A1D48_RS24505 PF14220 Domain of unknown function (DUF4329) A1D48_RS24510 PF15606 Bacterial toxin 34 A1D48_RS24510 PF03527 RHS protein A1D48_RS24510 PF05593 RHS Repeat