        recF NONE
A1D48_RS00020    6234 ..    6257 +   -14  -3.89614   AATATTCCCGCGTAA          TCTCTCCCTT ATAT AAGGGAGAGA           TTTAGTCTGTAGGTT 100 39
A1D48_RS00030    7452 ..    7466 +  -3.5  -5.24796   CTCAAATGGTTTAAC               GGGAC ACTCA GTCTC               TTTTTCTTCTATAGA  77 27
A1D48_RS00035    8529 ..    8552 + -10.2  -2.74012   CTGTCCTGATTCACT          CCGGCCCGAT CGCC GTCGGGCCGA           TAGTTCCACTCATGA  71 32
A1D48_RS00040    9727 ..    9740 +  -2.3  -4.08767   ATAGCTTCTTTGTGG               CCGGT GAGT ACCGC                TTTTGAACCGCTGCC  55 6
A1D48_RS00045 NONE
A1D48_RS00050   12246 ..   12259 +  -4.5  -5.04601   CTGCGTCATCCCCAA               GCTGGC GCA GCC-GC               TTTTTAATTTATGCG  80 265
        torT   16171 ..   16194 +  -3.9  -3.18681   GTAAGCTTAATGGCT          TCAC-CGTTG TGCTC CAGCGTGTGA          TTCATCACGTTCAGG  47 230
        torC NONE
        torA NONE
        torD   21208 ..   21218 +  -3.2  -4.39414   TGATACCAATCAATA                 TCCA TGA TGGG                 TTTGTATTTAGTATT  62 121
A1D48_RS00085 NONE
        ccmA   23301 ..   23320 +  -6.3  -2.86177   CCGCCGCCTGGCGCT            GACCGGC GGGGGG GCCGGGC             TGTGATGTGGCGTGT  55 1
        ccmB NONE
A1D48_RS00100   24764 ..   24776 +  -6.2  -2.50493   ACTGAAAAGGGGGCA                CCGG TGAGT CCGG                CATTTTCATCGTGGA  53 19
        ccmD NONE
        ccmE NONE
A1D48_RS00115 NONE
        dsbE NONE
A1D48_RS00125   29069 ..   29081 +  -5.5  -3.21593   CGTGTGAAGTATGAT                GGCGA GCA TCGTC                TCTTATCAGGACATC  54 117
A1D48_RS00130   30496 ..   30507 +  -2.2  -4.11235   AGGATGGCCAACGAT                TTGG TGCC CCAG                 TTTGTCTCATCGTTA  56 196
        ibpA   31391 ..   31407 + -11.5  -2.80113   TAACTGATTCCGTCG              GGTCGCG TTG CGCGGCC              TGTCATCCCATGCTC  77 34
        ibpB   31936 ..   31957 + -17.3  -5.24129   TAAGCTCCTTGCCTT           GCCCCGCCA GAGA TGGCGGGGC            TTTTTTGTGCCACGA 100 41
A1D48_RS00150   33770 ..   33783 +  -9.5  -2.66274   TTGGGGAATGGGTTA               GCGCC TGAT GGCGC                GTTGCTTATCCAGCC  68 25
A1D48_RS24445   34119 ..   34133 +  -2.8  -2.62735   ATTTTGCAATAAGAT               TCCC TTGCTGC GGGA               TAATGTGAAGCATAT  40 50
A1D48_RS00155 NONE
A1D48_RS00160 NONE
A1D48_RS00165   35475 ..   35501 +  -8.7  -3.54424   GTAGCGCCATCAGGC        GATGGC-GTGCC GGAT GGCGCAGCCGTC         TTTCCGGCACTGAGC  71 60
        dsdC NONE
A1D48_RS00185   40987 ..   41004 +  -5.5  -4.42386   GATAACAGTTAAATG             CGCCGTT GCCA AACAGCG              TTTTATAGCTGGCGA  70 515
        ivbL   43612 ..   43636 + -10.7  -5.63517   CACACGATTCCAAAA         CCCCGC-CGG CGCAAA CCGGGCGGGG          TTTTTTGTTTAAGAC 100 52
        ilvB NONE
        ilvN   45917 ..   45947 +  -5.4  -2.73159   CAGCTCACGCCAAAA       TGTTCATGTACGCC GCT GGCGGAAATAAACA       CTTTGCGCGGATTGA  47 268
        rbsK NONE
        fucP NONE
A1D48_RS00240   50101 ..   50125 + -12.2  -5.96219   AGGCTTGAACAGCCG          CGCGCTTATC GTTAA GGTAAGCGCG          TTTTTTTTATCCATC 100 48
        uhpA NONE
        uhpB   52629 ..   52641 +  -6.2  -4.58685   CTTTGCGCTGCTATG                GGCG CTGAA CGCC                TTTTTCCAGGGGTTT  76 409
        uhpT   55142 ..   55160 + -13.1  -5.31456   ATTTGGTAACGTTTT             GCCCGGC TTAAC GCCGGGC             TTTTTTATGCCTTGC 100 49
A1D48_RS00265   55964 ..   55991 + -12.9  -2.94356   AGGCTTATAGCTCAT        CATTTCCGTGA CATATA TCACGGAAATG         TGATCTTGTTTTGAA  86 226
A1D48_RS00270 NONE
A1D48_RS00275 NONE
A1D48_RS00280   57621 ..   57633 +  -3.3   -2.8552   TAGTTTCAATCCTTA                AAGGC CAA GCCTG                ATTTCATAAATAAAA  44 12
A1D48_RS00285 NONE
A1D48_RS00290 NONE
A1D48_RS00295 NONE
A1D48_RS00300   61766 ..   61794 +  -7.4  -2.88069   AATTCCCGTCAAACG        GCGCAGGAAGTT GTAGA GGCTTCCTGCAC        TCATTATCGTATGAA  59 44
        nepI   65224 ..   65242 +    -3  -5.42259   TTATGCTCTGCGGTG             GCGGCAAA CCA TTCTCCGC             TTTTTTTCACCGTGC  84 113
        dagR   69980 ..   70006 + -11.5   -2.5638   ATAGCTAATCCTTTT         ACTGGCGGGGC TTCGC GCCTCGCCAGA         CCTTTCTTCTTCCTC  77 33
A1D48_RS00345 NONE
A1D48_RS00350 NONE
A1D48_RS00355 NONE
A1D48_RS00360 NONE
        dgaE NONE
A1D48_RS00370   74846 ..   74867 +  -6.5  -3.39521   AGCCGTCAGTGATTC           CCTTTCGAG CCTC CTCGCAGGG            TTAAATTTTCCTGAA  59 164
A1D48_RS00375   76195 ..   76205 +  -6.8  -3.62054   CAGGCTGCCGCTCAC                 CGCA AAG TGCG                 TTCCTTCTTTAGCGT  62 335
A1D48_RS00385 NONE
        mgtA NONE
        mgtR   81245 ..   81257 +  -5.5  -4.33274   TAGTTGTTCTTTTTA                TGGCG GGG CGCTA                TTTTCATGGTATCCC  70 179
A1D48_RS00400   81957 ..   81977 + -14.1  -3.93262   AAATGGCAAGTAAAA            TAGCCCCAT TAA ATGGGGCTA            TTTAGTCTCTTCAGG 100 211
A1D48_RS00415 NONE
A1D48_RS00420 NONE
A1D48_RS00425   84856 ..   84874 + -14.6  -3.27902   CGCTTCCGGGTAAAA             GCCGCTGA AGA TCAGCGGC             TCTGTTGTTACCTGA 100 85
A1D48_RS00460   93096 ..   93130 +    -5  -3.39862   CCGGAGACGACGATC    TTC-CGCGCCTCGAT TGCTAC ATGGAGGCGCGCGCA     TTATAGCTACTTCCT  53 433
A1D48_RS00470 NONE
        yicI   97117 ..   97132 +    -6  -3.30124   CTGAATCGCCGGATG              GCGCCG TGAG CTGCGC               TTATCCGGCCTACAA  59 43
        gltS  102155 ..  102176 +  -5.8  -3.85698   CCTGTAAACGCTTCT           GCGCCGTT TTCGAC AACGGCGA            TTTATAGAGCAGCAC  63 324
        ligB  109977 ..  109991 +  -5.6  -2.87211   GATAATTGGCCCTTC               GCCCAT ATC AAGGGC               TATCTGAGCGCCAAT  49 304
A1D48_RS00535  112610 ..  112628 +  -2.4  -5.45652   GCATCATGAAGTCCA            GACGGCG ACCTAC CGCC-TC             TTTTTTCTTCAGGAT  85 215
A1D48_RS00550  114182 ..  114199 + -11.3  -5.96219   GAAAATTGATTTTAA             GGCGACT GAAA AGTCGCC              TTTTTTTTGTCCGTA 100 32
        pyrE  115294 ..  115321 +    -4  -5.69023   ACCCAGAATCAGCAA        CACAATCAGGCG CAAA CGCGTGCTGGTG         TTTTTTTCATCTTTT  91 424
A1D48_RS00575  118187 ..  118200 +  -6.7   -4.2074   TAAGATTCTTTGCGC               GATCC ATCG GGATC                TTTGTCTGTTCGGGA  72 38
        rpmB NONE
        rpmG  118840 ..  118855 +  -8.2  -5.86976   TTGATGTAACAAAAA              CCTCGC TTCG GCGGGG               TTTTTTGTTTTCTGG 100 49
        mutM  120071 ..  120097 +  -3.6  -4.15222   TTTTTGCGCCAGCGC         CACACGTTCGTC CAG GGTGAACATGGG         TTTCTTGCCGGGGCT  60 373
        rfaQ NONE
A1D48_RS00610 NONE
        rfaP  125204 ..  125216 +  -2.7  -4.23758   TTTAATATCTAAAGT                CTTTA GAT TAAGG                TTTTAACTCTGGGGT  58 327
        waaB NONE
        waaO NONE
        rfaJ  128340 ..  128350 +  -2.6  -3.05046   CTGGAAGCGCATATC                 TTTA TCG TAAA                 CTTTTCCACAAATAA  43 0
        rfaY  129182 ..  129196 +  -2.9  -3.34369   TGAGAAGTAATATTA               GTTAT TGAAT ATAAC               ATTTATTTATAGGTT  46 121
        waaZ  130067 ..  130085 +  -5.3  -5.01422   GATAAATCATTATTT            TGCGTTGC TTCG GCA-CGCA             TTTCTTTTTCTATAA  77 47
A1D48_RS00650  131295 ..  131324 + -13.7  -6.08563   CCGGACGATGGAAAA       CGCGCTGATAC CGTAATAA GTATCAGCGCG        TTTTTTTTATCTATT 100 47
         kbl NONE
A1D48_RS00680  138008 ..  138028 + -11.2   -5.4505   CGTTTCATCGTAAAA            GGTTGGTG TCATT CACCAACC            TTTTTTGTTAGGGAA 100 80
A1D48_RS00685  139401 ..  139413 +  -3.3  -5.09426   AGCGCGTAGCGTAGA                CCGGT TGC AGCGG                TTTTTTCGGCTTGCA  76 146
A1D48_RS00705  143738 ..  143756 +  -3.9  -3.13772   AATCTGCCTCTGGTG            CGCGGTAA GTGA TTACC-CG             TCGTTTTCATGACGT  48 14
        grxC  144061 ..  144075 +  -3.5  -3.14878   CGCTGGATGCGCGTG               GTGGA CTGGA TCCGC               TGTTGCGTTAAGGCG  46 0
        secB NONE
        gpsA  145640 ..  145669 + -10.1  -4.39426   AACTGTTTGCATAAA       CGACCCAACCCG CACAGAA CGGGTTGG-TCG       TTTTCTGCCCGTCTG  87 49
        cysE  146973 ..  146996 +    -3   -3.6502   AACAGGCAGTTTCCG          CGCGACGGTA AGGC TATAGCCGCG           TTTGAGTAGCCAGTC  51 483
A1D48_RS00745  150787 ..  150800 +  -5.9  -3.96148   AACTTACGGCGCTAT               GGGCG GGCG TGCCC                TTTGTCGTCAACGCA  65 311
A1D48_RS00785  161901 ..  161911 +  -4.6  -3.34398   CCACAGCGTATTTCA                 CGGC ATA GTCG                 TCTTTGCGAAACACC  51 409
A1D48_RS00805 NONE
A1D48_RS00810 NONE
        selB  169857 ..  169877 +  -4.7  -5.69262   TAAATAACAAATGAA            GCAATACAA TTA TTGCGTTGC            TTTTTATTTTTCTGG 100 52
A1D48_RS00825  172674 ..  172696 + -14.2  -5.51402   TGTTTTAACTACCAG           GTAGGCAGCG ACA TGCTGCCTAC           TTTTTTTAGCTATAT 100 33
        yiaJ  184431 ..  184452 +  -4.5  -4.02534   AGACAGCTCGCCAGG           TTTTATCAG GCAT CTGACAAAA            TTTGTCCGTTTGCGT  61 40
A1D48_RS00890  185073 ..  185083 +    -4  -4.56775   GGCGCGTTCTATCTC                 TTCT GCC AGAA                 TTTTTACGCCCGCCT  69 92
A1D48_RS00905  189947 ..  189964 +  -5.5  -3.76492   TGAAATCCCAACCGC             GTCCAGC ACCT GCTCGAC              TTTAATGCCCTTACA  58 338
        xylA  192607 ..  192634 +  -9.8  -2.78679   CCTGTAGTCGTGATT        AGCCCGGTAAGCG TAG CGCT-GCCGGGCG        CTTTCAGTAAAGGAA  69 74
        xylB  194120 ..  194145 + -10.5  -3.61922   TGTCCTAAGTCAGAA         TGCCTTTCGGT TTTG GCTGAAAGGCA          TTTCCCGTAAATATT  78 33
A1D48_RS00930  194634 ..  194659 + -12.7  -3.65199   TTCCTACAGTGATGA         TGAATGATGGC CGGA GCCATCATTCG          TTTAGCTAACCCATT  95 19
A1D48_RS00940 NONE
A1D48_RS00945  196148 ..  196164 +  -5.1  -3.10597   CCTGGTGAGGTGTGA              TGCCG CGAAATC CGGCA              ATTTTCGCTAAACAA  51 49
        glyQ NONE
        glyS  199275 ..  199290 +  -6.8    -5.626   AGTTAATTAAAAAAA              CCTGCT TTCG GGCAGG               TTTTTTTATAACATA 100 47
A1D48_RS00960  200210 ..  200237 +  -3.4  -3.08283   TTTGAACCCGGCATA        GCTCGCATTTCT TGCG GGAAATGCCAGA         TATTAAAATCCTTAT  43 321
A1D48_RS00980 NONE
A1D48_RS00985  204185 ..  204213 +  -8.9  -5.44721   TGTTGGCGTTTTATA        GGCCCGATAAC CCATTAT GTTATCGGGCA        TTTTTTTAACGTAAT 100 363
A1D48_RS01005  206932 ..  206947 +  -6.1  -4.04089   GCGTTATCCCGCCGC              CTGCG GATTGA CGCAG               TTCTTCTCTATTTTT  68 87
A1D48_RS01020  211478 ..  211501 +  -2.5  -3.81741   CGCCCCGACAAAACG         GGCTTC--CAG TACG CTGACGAAGCC          TTTCAGTTGTCCATT  52 231
A1D48_RS01035  213278 ..  213304 +  -5.1  -5.27335   ATGCAACACCAGGCG         TACAGCGCACC CATTT GGTGCTCTTTA         TTTTTATTTAGCACA  82 202
        lpfA  214175 ..  214197 + -13.5  -5.00616   TACAGTCAATCATAA           TGGCAACGG AAATC CCGTTGCCA           TTTTTTCCAGCGGAG 100 56
        lpfB  214916 ..  214931 +  -3.2  -4.12599   GACATGTTGACACAG              CGCGTT AACT AACACG               TTTTAAAGGATTATT  57 14
        lpfC NONE
        lpfD NONE
        lpfE  219101 ..  219118 + -12.7  -4.49644   ACGAATAATCACTGA             GGGCCAG TTCG CTGGCCC              TTTTCCATTTTTAGT 100 33
        eptB NONE
A1D48_RS01070  221180 ..  221198 + -14.6  -5.76633   GACCAAATTCAGAAA             CCCTGCTC AAC GAGCAGGG             TTTTTTTGTATCTGA 100 36
A1D48_RS01075  221636 ..  221656 +  -4.7   -4.1196   GCCTGTAATAGCTGC           TGCGCGGC CTGGTA GCCG-GCA            TTTTCACCCTCGCTT  62 323
A1D48_RS01085  223614 ..  223639 + -11.1  -5.69023   TGGTTGAAATAATAC         AGACCGCCAGC CCGC GCTGGCGGTTA          TTTTTTTGATGTTTT 100 29
A1D48_RS01090  225008 ..  225028 + -12.6  -4.00411   GTTTTTGTGATCGCG            GTAGGCCG CACGA CGGCCTAC            TTATTTACAATTTTG 100 40
A1D48_RS01095  227198 ..  227221 +  -2.2  -3.86897   GTGTAGGCCGGATAA          GCGCAGCGCC ATCC GGCGTAATGC           TTTATCCGCGATGCA  53 67
        dppB NONE
        dppC NONE
        dppD NONE
        dppF  231267 ..  231278 +  -7.2  -3.30124   CGTTTTATGCCGGAT                GGCG GCTG CGCC                 TTATCAAGCCTACAC  63 44
A1D48_RS01130  233438 ..  233477 + -18.6  -3.73775   AATGGCAACATGCGC  CCGAACCAGGCCGCAGGG GAAA CCTTGCGGCCTTTTTCGG   TTTACTGCGGGTAAG 100 66
A1D48_RS01150  237355 ..  237368 +  -2.3  -2.58544   CACATTCATTAAGGA               AGCCA TGAA TGGCG                ATTCTGGGACTGCAG  39 18
        bcsQ  238093 ..  238135 +  -5.3  -2.57463   ATGCGGGCGACAAAA CGTCCGCCGGGAGCCTGCG ATGAG CGCCCTTTCCCGGTGGCTG CTTATCCCGCCGGTT  48 3
        bcsA NONE
        bcsB NONE
        bcsZ NONE
        bcsC  247736 ..  247749 +  -3.7  -2.91199   GGCCTGAGAAGCGCA               GCGCC ATCA GACGC                TATCATTAACCGTTA  46 77
        hmsP NONE
A1D48_RS01190  251323 ..  251348 + -12.6  -3.37259   ATCTCGCCACTTATG         CCCGTAGTCC CTTCCA GGACTGCGGG          TGTTTGCGCATAATT  90 40
A1D48_RS01195  253220 ..  253233 +  -3.1  -4.32857   GAGTCGCCTGCGGCA               GTGGT GTCT ATCAC                TTTCTCTTTCGGCAG  62 230
        pdeH  254996 ..  255041 +  -2.5  -3.30658   TTCTGACCCTGTAAC GCCAGACTGTTCC-CGTAATAC GTG GTATTACGAGGCGCGGTCATCC TCCTTTTTCGTCTGG  46 27
A1D48_RS01210  257174 ..  257201 + -11.2  -3.02144   CAGTAACGTGAAACG        TAGCGCCGGATG ATGC CATCCGGCGCCC         TATTACAACGCCTGA  79 35
A1D48_RS01230  262401 ..  262421 +  -5.3  -3.72695   ATCGCGATACTTTTC            CAGCGACAG ACC CTGCCACTG            TTTAATAAACGCGAT  58 316
A1D48_RS01240  264530 ..  264554 +  -7.1  -2.79183   ACCGTTTTTAACCAG          TTATGGGCGAT TTC ATCGCCCAGCA          TATCGTCGCCATACC  52 213
A1D48_RS01250  267083 ..  267107 + -11.5  -6.02546   GAAGAGCAGGCTGAA          TCGGGATCC AGATCGC GGATCCCGA          TTTTTTTTGGTTTCC 100 59
A1D48_RS01255 NONE
A1D48_RS01260 NONE
A1D48_RS01265 NONE
A1D48_RS01270  271642 ..  271652 +  -4.6  -3.71794   AGAGCGATGAATGCA                 GGTC GGT GGCC                 TTTACGTAGTTGAAT  58 81
A1D48_RS01285  274700 ..  274728 +  -2.3  -3.81755   TTACCTCTTATCCGT        TACCAGTCAGTGT ATG ACACTGGAGGGAA        TTATGTTTGAAAAAT  51 55
A1D48_RS01290  276005 ..  276042 +  -7.8  -2.64925   TAGCTTTTTAGTTGC   TATCCGGCCTACAT AATATAAAGC GCGTAGGCCGGATA    ATTATCGTCCGGTAT  59 64
A1D48_RS01310  279978 ..  279991 +  -5.2  -3.90489   AGATCCATAGCGAAA               GCGC GATAGA GCGC                TTCATTTCTTTTTTA  61 143
        prlC  282061 ..  282083 +    -2  -3.18264   ATTACGGGATTAAAG           GCTGATTT TACGTGC AAATCTGC           TTAATGGATGAAACG  44 21
        rsmJ  282906 ..  282941 +  -4.6  -3.20494   ATAAGGCGTAAGCCG    CATCCGGCACTGAGTA TTAC TGTTCGGTGCCTGGCG     TATTAATCATTCGGT  50 101
        uspB  285999 ..  286029 + -11.9   -2.8585   TCGTTTCATCCTGAC      AGGCCGGATTAGCG ACAG CGCTA-TCCGGCCC       ATTTGGCTTAAATAA  80 148
A1D48_RS01345 NONE
A1D48_RS01350 NONE
A1D48_RS01355 NONE
A1D48_RS01360 NONE
A1D48_RS01365 NONE
A1D48_RS01370  296140 ..  296152 +  -4.7  -3.02471   TCATAGAGTTTCCCT                GGGGG TTA CCACC                TGTGTATGATGCCGG  49 121
A1D48_RS01375  297183 ..  297198 +  -5.4   -3.6135   AATAACGGTTATCCC              TGCTTG TTGG CAGGCA               TTTGAAAATATATTT  59 512
A1D48_RS01380  299159 ..  299174 +  -6.1  -3.83323   ACAGAGTAGTAAAAA              CCCGA AATTAA TCGGG               TTTGAATTATATAAA  64 98
        silC NONE
A1D48_RS01410  304606 ..  304627 +  -2.1  -4.86862   TATGTGTGAGTTAAC           CGTCAGGCG CATA TGCCAGGTG            TTTTGATTTTTTAGC  66 92
        silB NONE
        silA  309111 ..  309131 + -10.4  -4.04927   GTCCTGAACCTGAAA            GGGCACCC CCTGT GGGTGTCC            TTCTTTACTGATTCA  82 34
A1D48_RS01425  309654 ..  309682 + -13.2  -2.50492   CGGCTGATAACGGGA       CGCCGGTAGCAGG CACT CCTG-TGCCGGCG        ATATTCGTGGTAATC  84 50
        silP NONE
A1D48_RS01435  312451 ..  312471 + -16.1  -3.35996   AATTAATCCGGCAGA            CGGGGCCGC GTC GCGGTCCCG            TTATCAGTCCAGGTA 100 35
        pcoA NONE
        pcoB  316882 ..  316892 +  -6.8  -4.08945   TATTCCTGGCGGGAG                 CCAG AAT CTGG                 TTTTAACGCACTGAT  70 9
        pcoC  317303 ..  317315 +  -2.7  -2.80074   TACCGGTAATTACAC                CTTTA CAG TGAAG                TAATATTATGAACGA  41 10
        pcoD  318266 ..  318277 +  -4.4  -3.60002   AGGGGACAGCCAAAG                CTCA TGCG TGAG                 ATTTTTACTTTCATA  55 39
        pcoR NONE
        pcoS  320413 ..  320426 +  -5.3  -2.75064   GAGAAACCTGGAAGG               TGACA AAAT TGTCA                TCATTCAGTCACGCG  49 54
        pcoE  321088 ..  321105 + -12.7  -5.79526   GAAGTCACTGGCTTA             CGCTCCC GTCC GGGAGCG              TTTTTTTTCCCATAT 100 77
A1D48_RS01485 NONE
A1D48_RS01490 NONE
A1D48_RS01495  326687 ..  326710 + -10.2  -3.50555   GCCGGGCAAGCGAAG          CGCCCCCG-GC AAG GCGCTGGGGCG          TTAGTCTTCTTTCGG  77 103
A1D48_RS01515  330693 ..  330715 +  -8.3   -4.6391   GAGGCCTGGCTTTCT           GCGGCGGCG CTTTC TGCCGACGC           TTTTGTATCGTTGTT  87 486
        tusA  332120 ..  332156 +  -3.6   -4.2828   CTGATCTTCCAGCGC   CGCCGCCGCTGCT-GCGG ATT CCTCTACCAGCGA-GGCG   TTTTGCTGCGTCACG  64 199
A1D48_RS01550  337607 ..  337620 +  -3.7   -4.1196   CCCAGTTCGCCGGAA               CGGGC GGCA GACCG                TTTTCCACCTCGCTT  60 404
        ftsY NONE
        ftsE NONE
        ftsX  341469 ..  341485 +    -8  -3.68024   ATGGGCTTCCGTTCG              CAGGGA AAGAG TCCCTG              TTGTCTCTTCCCCGC  69 69
        rpoH  342547 ..  342568 + -10.9  -5.49579   CGAATTGCCAATGAA           CCCTCGAAT GTGA ATTCGGGGG            TTTTGTTTTTTGTAG 100 47
A1D48_RS01585  344113 ..  344139 +  -8.7  -4.66535   TCTCCCGGCATGTAG        GCCGGATAAGCG TCAG CGCC-ATCCGGC         TTTCTTTTAGCGCTT  89 188
        livk  346083 ..  346101 + -13.1  -2.73159   AGATAAGTTATCCCA             CCGCCCG CACGC CGGGCGG             GTTTAAAAAGGTTAC  85 48
        livH NONE
A1D48_RS01610  348314 ..  348327 +  -3.1  -2.78867   GGCGAAAGGAGAGCA               GGCATG AGT CA-GCC               ATTATTAGCGGTTAA  43 19
        livG NONE
        livF  349778 ..  349806 +    -6  -3.57462   GAACGAAGCGGTGCG       CAGCGCCT-ATCT GGGC GGATAAGGCGCAG        TTTACAGCTGCCATC  62 4
A1D48_RS01625  350359 ..  350385 +  -2.4  -5.04175   TCTCTGTCGCCTTAC         TATCTTTTTTTT GTA ATAAAAAAGTTA         TTTTTCTGTCATTCG  71 143
        ugpB  351816 ..  351852 + -13.1  -2.71011   GCCTGGTGGCGCTGC    GCTTATCAGGCCTACAG CGT TTGTAGGCCGGATAAGG    TGCTTGCACCGCCAT  85 51
        ugpA NONE
        ugpE NONE
A1D48_RS01645 NONE
        ugpQ  355529 ..  355539 +  -6.8  -3.60296   GGGAATGGTTTAGCA                 TCCG GTC CGGA                 TTTCCGCTGCCGCTG  60 121
A1D48_RS01660  357744 ..  357764 + -16.9  -3.39028   GATTTTTAATTCCAG            GCCCGGTGT CAG ACACCGGGC            TATTTGCAGATTATG 100 39
A1D48_RS24450  362995 ..  363005 +  -2.4   -2.8547   ACATTCAGTCTCCTC                 ACGC TTT GCGC                 TATGGTGTAAACAAT  41 101
A1D48_RS01695 NONE
A1D48_RS01700  365022 ..  365056 + -11.3  -3.72695   GCAGATTTGTCGCTC     ACCCCGGTCGCGTAC TTAAT GTACGCTCCCGGGGA     TTTACTGAGGGACAT  91 149
        gntR  366390 ..  366401 +  -3.6  -3.53444   TTTGCAACTTGTAGA                GTGG GGGC CCGC                 TTTGAGCACGACTAA  50 151
        gntK NONE
        gntU  368338 ..  368363 +  -6.2  -5.80364   TATCGACACCGTAAG        CCGGGTAAGGCG TAAT CGC-T-ACCCGG         TTTTTTTATTGAGGT 100 90
         asd  369901 ..  369916 +  -6.1  -5.82316   TTTGTGTTAAACCAG              GGGTG CATCGT CACCC               TTTTTTTTGCGTAAT 100 123
        glgB NONE
        glgX NONE
        glgC NONE
        glgA NONE
A1D48_RS01750  379539 ..  379556 + -14.1  -5.32882   TTTAACGCTTGAGAA             CGGGGCC AAAC GGCCCCG              TTTTTTATCGTGGTA 100 44
A1D48_RS01755  380468 ..  380484 + -10.8  -3.80461   AAATAAAAAGACATA              GCGGGC AAGAA GCCCGC              TTTCGTCATCGCTTA  85 40
A1D48_RS01775  385962 ..  385995 +  -5.9  -2.84103   GCCTGTAAATAAAAA     ACGGCAGCCGGAACT TTCA ACTTCTGTCTGCCGC      TATCGTGAATGTTTT  51 46
A1D48_RS01780 NONE
A1D48_RS01785  388181 ..  388191 +  -2.4  -4.63218   AAAAGGGCGGTATAA                 ACCG CCC CGGA                 TTTTATTACGACGCC  64 56
        glpE NONE
        glpG  391141 ..  391162 +  -5.9  -4.56597   AACGAACGTGAGGCG           TATC-CGGCC TGT GGTCGAGATA           TTTTTCCAGGCCGGG  72 30
A1D48_RS01805  392382 ..  392392 +  -8.2   -3.1855   GCGAAGCTCAGCCAG                 GCGC GGC GCGC                 TTCGGTATTAAAACG  62 419
A1D48_RS01815  395492 ..  395502 +  -6.8  -3.25072   CTCAACGGTAGAGCG                 GGTG ATT CACC                 TTAACTTGTCGTGCC  59 206
A1D48_RS01820 NONE
        rtcA NONE
A1D48_RS01830  398614 ..  398655 +  -3.7  -3.96892   CATCTTCAGCAACTG CTGCGCGT-GCTGTACCGC GTCCTG GCGGTGC-GCGACGCCGAG TTTCTGGTAGAGGTT  58 173
        malP NONE
        malQ  406367 ..  406384 + -14.1  -3.99324   AGAAGAAGTAATAAA             GCCGGGG ATTT CCCCGGC              TTTATGATGGTGAGA 100 30
        bioH  410574 ..  410603 +  -7.1  -2.90075   GGCGGATAAACGTAT       TGAAGCGCGC-GGC GTC GCCAGTGTGCATCA       TGTAATTAAACAAAC  53 300
        ompR  418576 ..  418623 +  -4.8  -3.18023   CCGGACGGTTCTAAA GCATGAG-GCGAATGCGCTTCTC GCC GCGAAGTTCATTTGCCCGCACGC TGTTGCTCATCGTCA  52 20
        envZ  419931 ..  419956 + -13.4  -3.63694   ACAAAAGAGGCATAA         GAAAGGGAGG TATTAT CCTCCCTTTC          TTCTTAACGCTGGAT 100 26
A1D48_RS01920  423731 ..  423742 +  -5.8  -3.30124   TTTTTGCCGGATGGC                GGCA TAAA TGCC                 TTATCCGGCCTACGG  56 43
        nudE  428964 ..  428977 +  -9.5  -5.14563   AAACACAATAAGAAA               GGCGC CGGA GCGCC                TTTTTTGATCAGAAC  93 99
A1D48_RS01955 NONE
A1D48_RS01960  432957 ..  432970 +  -3.7  -3.53419   TTAACGAGGAGCGCC               GCCCG TGAA CGCGC                TCTTTGATATCTGGT  52 5
A1D48_RS01965 NONE
A1D48_RS01970 NONE
        hofQ  435092 ..  435107 +  -7.6   -2.8585   GCTTTTCGTTGCTTA              CGCATT GATT AATGCG               CTTTGCCTTGCCTAA  59 139
        aroK NONE
        aroB  437125 ..  437149 +  -5.8  -4.28432   CAACAAGAAAGGTCA          GACTGATATT GCGTA GATGTCAGTC          TTTTAGCTTCAGGTT  67 41
        damX  438625 ..  438646 +  -6.6  -2.97613   AGGATGCTGTCGGAG           CTTTCTCC ACAGCC GGAGAAGG            TGTAATTAGTTAGTC  56 166
A1D48_RS02000 NONE
A1D48_RS02005 NONE
A1D48_RS02010 NONE
        trpS  442046 ..  442060 + -11.4  -5.76633   AGACCTGTAAAAAAA               CCGGGA AAA TCCCGG               TTTTTTTGTATCTGC 100 127
        ppiA  456339 ..  456359 + -15.4  -4.46155   CATAAAACATGCCTG            CGCGGGCG CGAGC CGCCCGCG            TTTTCTCCCTGTCTC 100 36
A1D48_RS02060 NONE
A1D48_RS02065 NONE
        pabA  457821 ..  457833 +  -2.7  -3.61609   TGAGTGATTTTTTAT                TCATA TTT TGTGA                TTATAATTTCACTGG  50 55
A1D48_RS02075  459098 ..  459134 + -11.5  -3.16437   GTGGTGGCCTGATGG    CGGATTGCCGGATAAGC GTA GCGCATCCGGCAGTCGG    TCTTAACCTTTTGTA  81 29
A1D48_RS02090  462620 ..  462660 +  -5.4  -5.00895   GATTGCGGCGTAACA CGTG-ATGCCGGATGGCGGC GTG GCC-TTATCCGGCCTACCCG TTTTTATCTCGTAGG  78 28
A1D48_RS02115  465449 ..  465470 +  -5.7  -2.89797   ACGCAGGCTTCTGTT           CCGGTGCTG CCGA CCGCAACGG            TAATCTTTATACCGG  51 49
        kefG NONE
        kefB NONE
A1D48_RS02140 NONE
A1D48_RS02145  471251 ..  471265 +  -8.5  -5.90981   TCGGGCACAAAAAAA               GCGGG TTAAC CCCGC               TTTTTTTTCGTCTCA 100 187
        fkpA  472545 ..  472566 +   -13  -6.09888   AATAAAAACTGAGAG           CCGCCGCT TGTAAT AGCGGCGG            TTTTTTTTATTCAGG 100 36
A1D48_RS02165 NONE
        tusD  473913 ..  473925 +  -2.7  -2.53748   CGATCGGGTGGTGCA                GTTTT AAT GAAAC                GTATTGCATTTGTCT  40 19
        tusC NONE
        tusB  474626 ..  474648 + -10.6   -4.7268   CGCCCTAAAATTCGG           CGTCCTCATA TTG TGTGAGGGCG           TTTTATTACGTGTTT  95 81
        rpsL NONE
        rpsG  475662 ..  475685 +  -8.9  -4.21275   GTCATAGTCACCAGG          CGGGCG-CTT CAGGT AAGTCGCCCG          TTTTGGATAACTTAA  82 51
        fusA  477874 ..  477899 + -13.3  -2.78935   AAAAACCAAAATCCC         GTGCTCTCTCC TGAA GGGGAGAGCGC          TATAGTAAGGAATAT  85 52
         tuf  479133 ..  479148 + -11.8  -5.11063   GTTTTGAATTGAAGA              GGGCGC TTCG GCGCCC               TTTTTGTTGCCTGCT 100 55
A1D48_RS02215  479481 ..  479491 +  -5.4  -5.78622   TTAAAGAGATCGCCT                 GAGT CAC ACTC                 TTTTTTTTGACATCC 100 24
A1D48_RS02220  480034 ..  480056 +  -5.7  -2.52623   GGTGACCGATTAACC          GTCTGGAAAG AAAA CTTTCCA-AC           CTGTTATGAAACCCG  49 28
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  485854 ..  485879 + -12.7    -5.252   CGCATTCTCAACGAA         TAAACGGCTCA GCGA TGGGCCGTTTA          TTTTTTCTACCCATA 100 48
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR  488884 ..  488894 +  -3.2  -3.32963   ATGCTGCCCGTGAAG                 CTGG CCT TCAG                 TTCTAAGGTAGAGGT  48 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ  491556 ..  491585 + -12.3   -4.6645   TTTCTTGCAAAGTTG       GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC       TTTTGTATGTCTGTA 100 55
        rpsM NONE
        rpsK  492424 ..  492442 +  -4.4  -4.15508   CGTCCGCCGAAAAAA             CGTCGCGT ATA ACGCTTCG             TTTTCCAGGTTAGTT  64 14
        rpsD  493074 ..  493092 + -10.4  -3.14132   ACACCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TTAGTACCAAAGAGA  74 10
        rpoA NONE
        rplQ  494549 ..  494562 +  -9.5    -5.626   AGTAACGTAAAAAAA               CCCGC TTCG GCGGG                TTTTTTTATACCCTC 100 46
A1D48_RS02375 NONE
        zntR  495451 ..  495472 +  -5.8  -3.61244   GTTGATTTATTGAAC           CGGCG-GGG CTACA CTCGCGCCG           TTAATTTATACAATC  59 36
A1D48_RS02385  495764 ..  495798 +  -2.1  -5.09426   AATAACACTTCCTCT    TTAGAAGGCGCTGGCG GAGC TGCCGGC-TCTTCTGC     TTTTTTACGGTTGAG  74 22
        dprA NONE
A1D48_RS02420 NONE
A1D48_RS02425 NONE
        tsaC NONE
        aroE NONE
A1D48_RS02440  504441 ..  504479 +    -8  -4.08767   ATTGGCGGAGTACTG   CAGGCCCGATCTCTCAGC ATC GCTCAGGGGGCGGATCTG   TTTTACCGGACTGCC  77 73
A1D48_RS02450  506960 ..  506973 +  -2.3  -2.72471   AAGAAGCGTACTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 34
A1D48_RS02455  507175 ..  507210 +  -9.2  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 100
A1D48_RS02460  510293 ..  510308 +    -4  -3.08046   AGCAGTGATTCCGGA              TTTTCG GGAA CGAAAG               ATTTTACGCTGAGGC  47 69
         rrf NONE
A1D48_RS02475 NONE
         rrf  510797 ..  510846 + -23.3  -4.09117   GGAACTGCCAGACAT CAAATAAAACAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTATCTG TTGTTTGTCGGTGGG 100 28
        envR  517564 ..  517581 +  -4.1  -3.63968   TCATTTTCTACCCCT             TCTGCCA CAAT TTGCAGA              TTTAACGCTTTCGCC  53 194
A1D48_RS24460  527877 ..  527910 +  -3.3  -3.18274   CGACGTTATGCAGTG     TTTGC-CAGCGT TTGCCCAATTT ACGCTGCGCAAA     TTGCGTTGAGGTCAA  45 248
        csrD  532704 ..  532731 +  -5.6  -3.85698   GATTGCTGCTGATTT        TTTCAGCCCTGAG GGA CTCAG-GCCGAGA        TTTGTAACAAAGGAA  61 172
A1D48_RS02590  533891 ..  533905 +  -2.8  -2.75064   ATGCACGGCGGCGAC               CTGTTC AGC GAAGAG               TAGTTGGATACGGGC  41 8
        mreC NONE
        mreD NONE
A1D48_RS02605 NONE
A1D48_RS02610 NONE
A1D48_RS02615 NONE
        tldD  543292 ..  543305 +  -5.3  -3.96999   TCACTACCTGCACTT               TAAGC GGCA GCTTA                TCTTTTTCGGTGTAA  63 239
A1D48_RS02630 NONE
        aaeA NONE
        aaeB  547438 ..  547456 +  -8.1  -5.65177   GCTAACCCACAAGAA             CCGATGC CAAAA GCGTCGG             TTTTTTTATGACTAT 100 36
A1D48_RS02645  548089 ..  548105 +  -4.3  -3.06261   AAATGGTACCCATCG              GTTGCAG ATT CTGCGCC              TGTTCCGCGTTGACC  47 243
         mdh  550770 ..  550789 + -12.8  -3.98913   CTGTTCCTGCCCGAT            GCCGGGGC TTTT GCTCCGGC             TTCTTTGACTGTAAA 100 42
A1D48_RS02670 NONE
A1D48_RS02675 NONE
A1D48_RS02680  553625 ..  553643 +  -4.5   -2.5474   ATCCTTTTCCCTTTT             CATCCGT AATTA ACGGAAG             CTGTTCTGACTAAGG  46 17
        ttdA  554544 ..  554557 +  -2.4  -2.98447   TTACACCATTACGTC               TCAC AGCGGA GTGA                ATTTCTGATGACTAA  41 4
        ttdB  555316 ..  555332 +  -3.6  -3.82519   TAGCCCCATTATCGT              GCCTCC TGCCT GAAGGC              TATTTTATGACTAAT  53 159
A1D48_RS02695  555571 ..  555581 +  -2.6  -3.53444   TTCACCATCACCGCC                 TTAA CGC TTAA                 TTTCCGGAGGGATCC  48 15
        oadA NONE
A1D48_RS02705 NONE
A1D48_RS02710  559440 ..  559462 +   -12   -4.4078   TGACTAGCCGTCGAA           CGACGCGG GCAAAAG CCGCGTCG           TTTTAGTTCGACGCC  95 34
A1D48_RS02730  564027 ..  564048 +  -3.8  -2.87132   GACCCCACGTTACAA           GAGAGTTT TTTCCC AAACTTTC            TCTGTGCCGGCCAAA  46 185
        rplM NONE
        rpsI  565044 ..  565057 +  -9.5  -5.64274   ACTGTTAGCGAAAAA               CCCGC CTCG GCGGG                TTTTTTTATGGCTAA 100 63
A1D48_RS02745 NONE
        sspA NONE
        sspB  567369 ..  567386 + -12.7  -4.97158   TAGTAAAATAATCAA             CAGGCCC TGAA GGGCCTG              TTTTGTTTGGTCTCC 100 30
        nanR  568296 ..  568318 +  -4.8  -3.60925   CCCAGTTTAGTGAAG           CAGATCGC ACTATAA GCGTTCTG           TATTATTTGCTGCTT  57 57
        nanA NONE
        nanT  570904 ..  570926 + -16.4  -3.52113   GAAAAGTTAATCCGC           TTGCCCGGTT TTC AACCGGGCAA           TATTTGTAAGGGAGT 100 31
A1D48_RS02775 NONE
A1D48_RS02780 NONE
A1D48_RS02785  573241 ..  573256 +  -3.2  -4.64766   ACGCTCAGACCGTAG              TCCTGT AAAT GCAGGG               TTTTTGCGCTGTGGG  67 296
A1D48_RS02825  584484 ..  584509 +  -8.3  -2.60813   TGGATACCACCTGTA         GCGTAGCGT GATGAGGG GCGCTACGC          ATATTTCGCACAATA  63 20
        arcB  586967 ..  586983 +  -2.1  -3.86266   CCAACACCAGGGAAA              TCGTGGC TGC GCCGTGC              TTATTATGATGATGT  53 73
        elbB NONE
        mtgA  588539 ..  588550 +  -7.2  -3.30124   ATTTTGCCGATTGGC                GGCG CGAA CGCC                 TTATCCGGCCTGCGA  63 40
        mlaF NONE
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB  600853 ..  600868 +    -9   -2.9911   CCGGCACTTTTACCG              CGCTGA TTTA TCAGCG               TAATCTTTTGCTTAT  68 117
        ibaG NONE
        murA  602533 ..  602562 + -14.4  -4.08692   CTTCTGTACGCTTAA       TAACCCCCGCGA ACGCGA TTGCGGGGGTTA        TTTTACAGGCACTTA 100 42
        rplU NONE
A1D48_RS02960  604940 ..  604960 +   -14  -4.75174   CGGTAACGGATGAAA            GCCCCGCA CCTGT TGCGGGGC            TTTTTACATTCGATG 100 54
A1D48_RS02965 NONE
A1D48_RS02970  607242 ..  607261 + -16.4  -4.94147   GCCTATAAAAGCCAA            CGGGCCGC ATTT GCGGCCCG             TTTTATTATGTTCTT 100 73
        greA  609531 ..  609545 + -12.8  -4.36914   TAAAGAAAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACGGAGA 100 74
        rlmE  610743 ..  610757 +  -2.8  -3.40899   TAGAGTATCCTGACG               CTGTTT TTA ACACAG               TTGTAATAAGAGGTT  46 84
        ftsH  612762 ..  612781 + -12.8  -5.86609   TAGCGCTCACCGAAA            CCCTGGGG CTTG CCCCGGGG             TTTTTCTTTTTTTAA 100 65
        folP NONE
        glmM  615017 ..  615032 + -11.8  -3.14132   TTAAGTGACTAAAAA              GGCGGC GGTT GCCGCC               TTACTGCCCGCAAAA  83 37
        secG NONE
A1D48_RS03020  615668 ..  615683 +    -9  -5.92337   ATATTCCGAAAGAAA              GACGCT GAAA AGCGTC               TTTTTTTTCGTCTGT 100 41
A1D48_RS03025  617102 ..  617117 + -11.8  -3.08679   ATGTTCCACAAAAAA              GGCCGC TTTC GCGGCC               TGTTGCATCAACGAC  81 75
A1D48_RS03035  619029 ..  619044 + -10.4  -5.60689   TTCAGTTATCTAAAG              CCCCGA TTTA TCGGGG               TTTTTTGTTATCTGA 100 152
        rimP  619537 ..  619555 +    -3  -3.07487   TGAGTAATATCCAGA             AGGCGAAC CTG GTTCCCCA             CTTTTAACAGTCTGG  43 0
        nusA NONE
        infB  623972 ..  623986 +  -9.2  -5.61913   CAAGAAATTTAAAAA               GGGGCT TAT GGCCCC               TTTTTTGTCTTTATT 100 202
        rbfA NONE
        truB  625411 ..  625425 +  -2.8  -3.95071   GTAGAATACCGCCGC               TTAACG TCG CGTAAA               TTATTTAACAGTTTA  54 75
        rpsO  625804 ..  625820 + -10.8  -5.00884   GAGTTTCAGAAAGAG              GGGGCC TTCAT GGCCCC              TTTTTTCCAGCAGAT 100 48
         pnp  628170 ..  628190 + -18.3  -3.57792   GTAAGGTAGCCTTTT            GCCCTCCGC AGT GCGGAGGGC            TTTAGACCTGGCTGG 100 37
        nlpI  629186 ..  629211 +  -7.5  -4.04023   CGTAATCTTTTTGAT         TGCCATCACCT TCGC GGGTGAGGGCG          TTGTTGTTCGTTAAT  72 59
        yrbN NONE
A1D48_RS03080  631264 ..  631286 + -13.4  -6.11392   AAAGTAAAATATACA           GCCCCGATCG TCA CAATCGGGGC           TTTTTTTATTTCTTT 100 69
A1D48_RS03085  632812 ..  632846 +  -8.4  -3.89215   ATTTCATCCGCCTGG     GTCTCCCGCAGGATGG ATT CCAGCCCGTGGCGGAC     TTTCGCTTTATCACC  71 219
A1D48_RS03105 NONE
A1D48_RS03110  637063 ..  637099 +  -5.9  -3.75169   CAAACGCTTCGCGTT   CCG-TCACAAGGCGCT CCTTCT GGCGCTTTGTGAGCTG    TTTGATGCGATACTC  60 74
A1D48_RS03120  638139 ..  638156 +  -3.3  -5.72207   AATAGCCTTATCAAT             GGTGACG CTGG CCTCGCC              TTTTTTTCCTTTCAC  89 365
A1D48_RS03130  639118 ..  639129 +  -7.2  -3.43338   CATTCTTATCGCCAC                CCGG CACA CCGG                 TTACTTAATATACGT  65 80
        rsmI  644016 ..  644026 +  -3.2  -3.89822   AACCTTCGTTAAACG                 TGGT AAT ACCG                 TTTGTCGCATCAATG  54 392
        garL NONE
A1D48_RS03205  654248 ..  654276 + -10.2  -2.64803   TCGCTAACGACGTTG        TGCCCGGATGGC GTGTA GCGATCCGGGCC        TGAATTTCAGGCTGG  70 34
        garK NONE
        rnpB  655900 ..  655913 +  -9.5   -5.0925   CACTTCTTCATAAAA               CCCGC TTCG GCGGG                TTTTTGCTTTTACAG  93 36
        tdcA NONE
        tdcB NONE
        tdcC NONE
        tdcD NONE
        pflB  664252 ..  664291 +  -2.7  -3.08798   TTACTCAGGCGATGT  AACGTGAACGGGGCGATC GTGTG GATCGCCCCGCG-ACGGA  TCTTCACTGAACGGT  43 24
        tdcG  665748 ..  665767 +   -15  -5.58179   CAGAAGTTGAGAAAA            GGGCGCAC CAAA GTGCGCCC             TTTTTTGTTGTGATA 100 86
A1D48_RS03270 NONE
A1D48_RS03275  668742 ..  668779 +  -7.8  -3.57144   CGGGTCTACCCGTTA  TCA-GCCGGATCG-GGCG CTTG CGTCGCCATCCGGCATGA   TTTCAGGCTGCGGCC  69 98
A1D48_RS03290  670676 ..  670686 +  -8.2  -3.53012   GCCGGAAAATAAATA                 GCGC GCG GCGC                 TTTAAAAGCGGCGCC  67 29
        rlmG  682811 ..  682827 +  -9.4  -2.66733   TTCCGGGCGCAGACC              GCCTGC CTGTT GCAGGC              TGGTATCAATTCCCC  59 499
A1D48_RS03390  687963 ..  688003 + -17.1  -2.78384   GGTAGCAACGGTAAT G-ACATCCGCCCGGT-AGC AACAA GCTTACCGGGCGGATGTGC TCTGATAGAAGGCGG 100 52
A1D48_RS03405  691567 ..  691584 + -11.3   -3.5275   GTCAGAAACAAAAAA             GCCACTC TTTA GAGTGGC              TTAATTATATGATTT  85 59
A1D48_RS03410 NONE
A1D48_RS03415  694235 ..  694252 +  -9.8  -3.61946   GCACATAAAACAAAG             GCGGCC ATGCCG GGCCGC              TATTTATCTAAGATG  77 354
A1D48_RS03435 NONE
A1D48_RS03440 NONE
A1D48_RS03445 NONE
A1D48_RS03450  696441 ..  696453 +  -6.3  -3.57263   CTGTACTAGAGGATT                CTATG CGT CATAG                TTTGCCGCTGAGCGT  62 419
A1D48_RS03460  698402 ..  698421 + -13.6  -3.53012   CGACTAAACAAAAAA            GCCCTGCT TGGT AGCAGGGC             TTTAGGGGGAAGAAA 100 34
A1D48_RS03465  699227 ..  699247 +  -9.7  -2.80816   GAGAAGTAAACAACA            GGCCTGG ACTAGTG CCAGGCC            TGTAATCAGTCAGAA  69 32
A1D48_RS03475  701165 ..  701178 +  -9.5  -4.12037   ACCAAATAATTCACA               GGGGC TTCG GCCCC                TTTCTGGTCTTTATG  81 32
A1D48_RS03480 NONE
A1D48_RS03485 NONE
A1D48_RS03490 NONE
A1D48_RS03495  703588 ..  703604 +  -2.1  -3.10522   GTCATTGTGGAACTA              CTACCGG GAA CCTGGAG              TGTATTAAATGCCAT  42 1
A1D48_RS03500 NONE
A1D48_RS03505 NONE
A1D48_RS03510  706178 ..  706188 +    -4  -2.69799   CACAAAGAAAGATTG                 TTGA AGT TCAA                 TGGTATATAGAATGC  45 5
A1D48_RS03515 NONE
A1D48_RS03520  708355 ..  708377 + -10.5  -3.68302   CTCTAAGAGTGGGTG           GCCCGGCTT TCGCC GGGCCGGGC           TTGTTACGCTGTTAC  78 368
A1D48_RS03530  709558 ..  709575 + -14.1  -3.95073   GACCGGATAAAAAAA             CGCCGCC TTGC GGCGGCG              TTTATACGTATGCGG 100 112
        tsaD NONE
        folB  716400 ..  716418 +  -3.1  -3.40051   AAACGGTTATATATG             GGGTCTT AACGC GAGATCC             ATTTTTGCAGTGTTT  48 69
A1D48_RS03570  717346 ..  717377 + -11.6  -3.64822   GTCTGATAAGCGCAG      CGCCATCAGGCA ATTTATCG TGCCGGATGGCG       TTTAGCTGGCGGGGT  87 96
A1D48_RS03590  720921 ..  720935 +  -7.1  -3.91984   CCGGGTCAGGCGAAA               TGCCG CCATC CGGCA               TTATTTAAAGGATAT  70 106
        glnE  723784 ..  723796 +  -5.5  -3.82484   GCAAGCTGGCGGAAG                TGGCT GGT AGCCG                TTTGAATTATGCTAT  61 8
        hldE  725363 ..  725376 +  -2.3  -5.76949   TTCGACGCGTATCTC               GCGGT TGAC GCTGC                TTTTTTTTCGACCTA  91 106
        glgS  728569 ..  728596 +  -9.8  -4.90906   ATTATTCAGATCTTA        TATGAGCGGGCC GTCA GGCCCGTTCACG         TTTTTACTCTTGTGG  93 68
        ribB  730011 ..  730030 + -12.2  -5.50925   TCATGGTTGAAAAAA            GCCGATGA GATG TCATCGGC             TTTTTTGTATTCCTT 100 50
A1D48_RS03685 NONE
A1D48_RS03690 NONE
        cpdA NONE
        yqiA NONE
A1D48_RS03705  743871 ..  743890 +  -8.6  -2.94365   TCTCGCGGATCTCGA            CGTGTAAC GGTT GTTGCACG             CTTTATCCGGTCTGC  65 19
A1D48_RS03730 NONE
A1D48_RS03735  748535 ..  748571 + -13.8  -2.58822   TTAACTTCCTCGTCA    CCTGGCTCACGGTTTG TGACT CAGACCGTGAGATAGG    GTATTATCTGCGGCA  86 37
        parC  750947 ..  750990 + -13.3  -3.61103   CCATCCGGCGCTCTG CCGT-TGCCGGATGACGACGC AGTA GCGTC-TTATCCGGCCTACGG TTTCAGATCGGATTA 100 80
        plsC  751922 ..  751942 +  -3.9  -4.18762   TAGAAATCATTTTTT            CAGGCACAA CTC TTTAGCCTG            TTTTACATGGAGCTT  62 61
        ftsP  753378 ..  753413 +  -5.4  -4.07568   GGCGTCGTAAAGCGT    CCGAGTACGGGTCTG AATAGCG CAGACCCGT-CAGGG    TTTTCAGGAAGGAGC  65 31
A1D48_RS03770  759102 ..  759113 +    -3  -3.98981   CCAGAGGAGGGGATA                TCAT GGGT ATGA                 TTATTATTCCCTGTT  54 226
A1D48_RS03775  759472 ..  759491 +   -15  -4.77036   TATGCCTCACGAATT            CTGGCCGC CAGC GCGGCCAG             TTTTTCATCATCAGC 100 199
A1D48_RS03800  764832 ..  764846 +  -5.6  -2.61912   CAACGAAGCGTAACC               GGGCCA TCC TGGCCG               ATTATGGATACGTCA  50 62
A1D48_RS03820 NONE
        exbD  768284 ..  768311 +  -9.9   -5.4833   CTGCTGATGCTGTAG       GCCGGGTAAGGCG AAGT CGCC--ACCCGGC        TTTTTTATTGCCTAA 100 46
A1D48_RS03845  770797 ..  770812 +  -3.2  -4.43911   ATGAGATTTAGAGCC              TATCCC ATTA GGGCTA               TTTTACTTGCCATTT  62 30
A1D48_RS03855  771826 ..  771841 +  -7.6  -2.81055   CGATAACGAGAGTGC              GTCATC ATCA GATGAC               TAATCTCTTATATTC  58 286
A1D48_RS03860 NONE
A1D48_RS03865 NONE
        hybO NONE
        hybA NONE
        hybB NONE
        hybC NONE
A1D48_RS03895 NONE
        hybE NONE
        hypA NONE
        hybG  780671 ..  780696 +  -4.1  -3.28712   TATATCGCTCTATAA         TCGTTGTATAA TTAT TTATATATCGA          TTATGGGGCGAAACC  50 59
A1D48_RS03915 NONE
A1D48_RS03920  782503 ..  782535 +  -4.8  -3.63283   CAGCAGGGAATACCA      TGCCGGATGACG ACATTACTA CCCCATCCGGCA      TTATGGTTTAACTTT  57 53
A1D48_RS03930  785505 ..  785541 + -13.8  -3.81488   TAACGGGGTCATTCT   C-GTCGGGATATCGGCG TGGG TGCCGATATCCCGCCTG    TTGTGTTTACCAGCG 100 38
A1D48_RS03935  787349 ..  787382 + -16.9  -3.14344   TGGCTGTGTTTGTTT     ACCCGAATCACTTAC CTTA GTAAGTGATTCGGGA      TTAATCAGCAACCTC 100 154
A1D48_RS03955  793471 ..  793490 +   -15  -3.25539   GCTACCGGGTTCTAA            CGGCCACC TTCG GGTGGCCG             TCTTCATTACCCTTA  95 76
A1D48_RS03960 NONE
A1D48_RS03965  795830 ..  795841 +    -3  -5.47159   GAATAGTTTGTTTTT                TGAT TTAA ATCA                 TTTTTTGTGTTCACA  83 199
A1D48_RS03970 NONE
        iraD  797262 ..  797275 +  -5.2  -3.66178   TAATGCAGGAAGGAA               CGCC GGGCCG GGCG                TTTAACATTACCCAC  57 41
A1D48_RS03985 NONE
A1D48_RS03990  800711 ..  800721 +  -3.2  -4.09805   CGAAAGCCACAAACA                 GGGT TGA ATCC                 TTTAATTGTTCGTCA  57 19
A1D48_RS03995 NONE
A1D48_RS04000  803098 ..  803114 +  -6.6  -3.09234   TGTACCGAGGACATT              CTGGTT CGGGA AACCAG              TTCCGTGCGATTTAT  54 163
A1D48_RS04100  814708 ..  814718 +  -4.6  -4.24948   ACACGGTCTGCCAGT                 CGGT AAT GCCG                 TTTTGAGTGTAATAC  66 209
        trmB NONE
A1D48_RS04135  819820 ..  819841 +  -9.3  -3.11024   GGGACTAATGAGTAC           AGGGTCGGC AAAT GCCGGCCCG            CTTTGTCTTGAGGGA  68 33
A1D48_RS04140  820601 ..  820621 + -15.5  -5.35365   TCCTTTTTAAACAAT            GGCGCAGAT CGT ATCTGCGCC            TTTTTATTCTGTTTT 100 45
        ansB  821824 ..  821845 + -15.1  -3.24232   AGTATTAAAGATAAT           GCCCCGGTC GGAA GGCCGGGGC            TATCTTTGGAAGACC  95 33
A1D48_RS04150  822994 ..  823040 + -13.9  -3.62255   ACCGCCACAGGTCGG TAAG-C-GTCGCGCCATCAGGTA TTT TACCCGCTGGCGCGACAGGCTTA TTCCTTGTTATTCCG 100 63
A1D48_RS04180  827435 ..  827451 +  -2.1  -3.08812   TGTATCCTGGCGAAC              CGGCGTT AAA ATCGCAG              CTTTGTTAAAACCAC  42 108
A1D48_RS04185  828445 ..  828483 +  -9.5  -3.53761   AGTGCCATCCATATT   GAGCGGTAGCCCGACAA TAATT TCGTCCGGCTGCCACTC   TTTCAGCAAACGTTC  71 300
A1D48_RS04230  836180 ..  836197 +  -6.3  -4.52703   GACTGAACAAGGGCG             CTCTTGT TAAC GCAAGAG              TTTTCTCGTGGTTTC  76 244
        yqgB NONE
        speA  838392 ..  838419 + -13.6  -4.94487   GAGTATTCCGCTTGT        GGGTCGATTTAA TTAT TTAAGTCGACCC         TTTTATATTTTATAA 100 45
A1D48_RS04250  839327 ..  839338 +  -2.2  -2.52464   GGAAGGACTGTGTGA                CGCGC ATA GC-CG                TAGGTTGCGGGAAAG  39 104
A1D48_RS04255  840318 ..  840336 +  -5.2  -2.94099   TTATCCCAGTCAAAC             TCTACGCC AAT GCCGTAGG             TGTCTGGTGCCACGG  50 141
A1D48_RS04275 NONE
A1D48_RS04280 NONE
A1D48_RS04285 NONE
A1D48_RS04290  845694 ..  845726 + -11.3  -4.79756   TTTTCTGACTTCAGA      GCCTTTTCGCGTTGA GGC TAATCGCGGAAAGGC      TTTTTACGTTCTGTA 100 116
A1D48_RS04295  846892 ..  846924 + -12.7  -5.80817   GTAAACAAATTCAAA      CCCTTCCTCGTCG GGCCTAA CGACGCGGGAGGG      TTTTTTTATATTGAC 100 164
        speB  848180 ..  848203 +  -4.6  -4.57073   TTCGGACTCCTGACG          CTGCGAGAACT GCG AGTTCAC-CAG          TTTTTCGCCAAGATC  71 327
         tkt  851024 ..  851043 +   -15  -5.45652   TAATACGGCATAAAA            CGGGTCGC TTCG GCGACCCG             TTTTTTATTCCCCCT 100 45
A1D48_RS04350 NONE
A1D48_RS04355  856712 ..  856731 +   -15   -3.6053   AAGAAGTAATCGTTA            CGGGCAGG GATT CCTGCCCG             TTGATTTATCGCCGA 100 32
        fbaA  857906 ..  857925 + -12.2  -5.73339   GTCTGCTGATTGAAA            TGGCTTCC CTCG GGAAGCCA             TTTTTTTATAGTTAT 100 45
        mscS  859031 ..  859053 +  -4.1  -3.73302   TCTCTGGTTATTGAG          CGGATAAGCG TAGC CGCC-ATCCG           TTATTCAGTCTCTTC  55 77
        argO  859789 ..  859805 +  -3.7  -3.54475   TCGCGCATATGCACG              CGCTT TTCAACT AAGCG              TTGTCTGATGGACAA  52 12
A1D48_RS04375  860648 ..  860673 + -12.5  -4.39828   CACGCAGTAATCTTG         CCCGGCCTGGG CGCT TCCAGGCCGCG          TTTTCTCCCGGTGTT 100 31
        rpiA  862667 ..  862680 +  -2.4  -2.92924   GTCAGGGCAAATTTG               GTGA CATGTA TCAC                GTTTAATCGTTTGCC  41 78
        serA  864125 ..  864146 + -11.6  -3.16682   CTAATTTCCTCTAAA           TGGGCAGG AGATGA CCTGCCCA            TCCTTTCTTCTGGTT  81 37
A1D48_RS04420 NONE
        pepP NONE
        ubiH  868958 ..  868975 +  -2.5  -3.14051   CGGATAAGGCATTTA             CGCCGCC ATCC GGCATCG              TGTTCGTAAAAATAC  45 55
        ubiI  870302 ..  870328 +  -5.8   -3.8901   AACCCGTCACACTTT        GCTTTCCCGGC TATCGC GCCGGG-GGGC         TTTCCTCGTTTGAAA  63 71
        gcvT  871782 ..  871802 +  -8.9  -2.84946   AAACCTGTTTTTGTG            CGTAACGGC AAA GCCGTCGCG            TGATTCATCCTTTTT  67 2
        gcvH  872267 ..  872282 +  -5.4  -3.41359   GCCTACTCACTGCAA              CGCGAA TGAT TTTGCG               TATTCGTTTTCGCAC  56 72
        gcvP  875282 ..  875295 +  -9.5  -4.24123   CGACTGTTTTCTAAA               GGCGC TTCG GCGCC                TTTTCAGCTTGTTAA  84 51
A1D48_RS04455 NONE
A1D48_RS04460  876917 ..  876928 +  -4.4  -3.94823   GCGATAGTCGTCGTT                GATG CCGC CATC                 TTCTTCTACTTTGTC  60 337
A1D48_RS04470  878691 ..  878701 +  -5.4  -3.86897   AGAGGCGCAGTTCAT                 CGTT ATG AACG                 TTTCTCCGGAGTAAG  63 161
A1D48_RS04475  879438 ..  879480 +  -9.9  -4.16279   CGGCCTACGAGAACA GCACGTGCGAGCCTGATGGCG TTG CGCTATCAGGCTATC-CG-GC TTTTAACGTGATATC  84 85
        sdhE NONE
A1D48_RS04500  881447 ..  881468 +  -2.2  -4.15044   AGGCTTCAGGCGTAG           TGTTCGGC CATTTC GCCGAGAA            TTTGTTCACACCAGG  55 88
        xerD NONE
        dsbC NONE
        recJ  885480 ..  885505 +  -9.1  -3.30903   TTCGCTGTAATTAAG         GGGCGAAAT CCGCTAAT ATTTCGCCC          TTATAACCGCATTTT  71 62
        prfB NONE
        lysS  888183 ..  888213 + -17.7  -3.41738   AAATAAGATGTAAAT      TGCCGGATGG-GGC ATTA GCCGCCATCCGGCA       TCTCTTTGTTCAGGC 100 35
A1D48_RS04545 NONE
A1D48_RS04550  890267 ..  890294 +  -4.1  -5.12617   GTCCAGCCCGTCAAG        CGGGGAGTAGA CACCGA TATAATCCCCG         TTTTTTAGGTGGTTC  77 321
A1D48_RS04570 NONE
A1D48_RS04575 NONE
A1D48_RS04580  893781 ..  893797 +  -5.1   -5.4593   TTACGATCATAATCA              TCGATCG TAT CGATCTA              TTTTTATTGTTTTAA  87 516
A1D48_RS04585  894623 ..  894648 +  -4.7  -4.61868   TAACGACAGGGAGAA         GCCGTCC ACGGAGGGGATC GGACGGC          TTTTATATCTGACTG  71 55
        stdB NONE
A1D48_RS04595 NONE
A1D48_RS04600  899123 ..  899154 +  -3.8  -3.77846   ATGATTATTTTTTTC      TTCTCGGTCTTTTT CACT AAAAAAACGGAGAG       TTTGCATGTCTTCTG  55 98
A1D48_RS04605 NONE
A1D48_RS04610  900512 ..  900529 +  -2.7  -2.93747   GAGTAAAATACAGAA             TTCAGGCG GGA CGC-TGAG             TGTATGGCCTTTCAT  42 126
        rcnR  901872 ..  901895 + -12.5  -3.88396   GATTCTTATATAAAA          TAGCCGGGA GTTATA TCCCGGCTA           TCTTTTACTTTAGCC 100 23
A1D48_RS04635  904733 ..  904746 +  -2.4  -5.41143   AGCGTCATTTCCTTT               GTGA TAAAAC TCAC                TTTTTTTAAACAATC  77 60
A1D48_RS04640  906217 ..  906253 + -14.5  -4.09739   AACCGCATACAGCAT    CTGGCGCACATGTCTGA AAA TCAGACAAGTGCGTAAG    TTTTAGCGCCGTTCG 100 243
        kduI NONE
        kduD  908145 ..  908162 +    -7  -5.69473   AAAAAACTGATAAAG             CCCTGT CCTCGT ACAGGG              TTTTTTTATGATCTC 100 87
A1D48_RS04660 NONE
A1D48_RS04665  911097 ..  911107 +  -4.6  -3.71848   ATTTAGCGTTAGTAA                 CTCG GTA CGGG                 TTGTTCCTGCCGGGG  55 447
        lysA  913211 ..  913246 +  -9.7  -2.86164   GCGGGATGCGTAATC   CGGC-CTG-GCGCAGCG CTTT TGCCGCGCCCAGCGCCG    TGTCATCATTACAGG  65 274
A1D48_RS04700 NONE
        lplT  919281 ..  919291 +  -2.4  -4.62302   GCGATATCGACGTAG                 GCGG CAA CGGC                 TTTTTGCGCCTGTTC  65 326
        rppH NONE
        ptsP  925890 ..  925914 +  -9.2  -3.37354   TTATTCGCACCTTTG          GAGCGTCTGC AACGC GCAGGCGCGC          TTATCAATCGCTATC  71 167
A1D48_RS04740 NONE
        thyA  927662 ..  927681 +  -7.1  -5.81032   ACGATCCTGCCATAA            CCGACGT CATTGC GCGTCGG             TTTTTTTTACCCTTC 100 47
A1D48_RS04755  928279 ..  928306 +    -4  -3.37796   GCGAGCGTAACGAGG        CCGCCACGTG TCAATAAC CACGCGGGGG         TTCTCGCTACTGGAG  50 9
A1D48_RS04760 NONE
A1D48_RS04765 NONE
A1D48_RS04770 NONE
        recC NONE
A1D48_RS04780 NONE
        recB NONE
        recD  941403 ..  941415 +  -9.1  -3.30124   TTCTCGCCGGATGGC                GACGC GTA GCGTC                TTATCCGGCCTCCAA  71 47
A1D48_RS04800  944387 ..  944400 +  -8.1  -3.41636   ACAGATACAAAAAAA               CACCC GTAA GGGTG                TTCATTAAGTTGGTT  65 111
        mltA  945969 ..  945987 + -10.3  -5.88565   AAAATAGTGAGCAGG             GGTGAGG AATAA CCTCACC             TTTTTTTATTCTGAG 100 96
        tcdA  947246 ..  947268 +  -2.9   -2.9348   ATAATGTTTCAATCG          TTATCGATGT CATC ACATC-ATAA           TGTATAAACTTTCGC  42 457
A1D48_RS04840  950143 ..  950162 + -10.7  -2.57423   GTTATACAAAAAAAA            GCACCGC AATATG GCGGTGC             TACATTAATCACTAT  74 47
A1D48_RS04845 NONE
A1D48_RS04850 NONE
        rlmM  952897 ..  952941 + -16.6  -3.51365   ACGAGCGATAAAAAC GCGCTGCCGTCATCCGGCGC GTCATCA GCGCCGGATGGC-GCA-CGC TTATCTGGCCTATGA 100 30
        fucA NONE
        fucO  961322 ..  961334 +  -4.9  -3.95073   CAATATCGCGGCAAA                GAAAT GCC ATTTC                TTTATGCGTCTCAAG  60 194
A1D48_RS04925  968521 ..  968532 +    -3  -2.95093   AATGTTTTTGCGCAC                TTTC ATAT GAAA                 ATTTACTTAAGGTAT  42 157
A1D48_RS04930  968926 ..  968951 + -17.7  -6.22691   GCTGCGAAACGAACC         GGGAGCACTGT TTAT ACAGTGCTCCC          TTTTTTTTGTTATTC 100 106
A1D48_RS04935 NONE
        truC NONE
A1D48_RS04945  970588 ..  970607 + -10.7  -2.82666   TTTCCTGAGGTAAAT            CCCTCCC CCCTAC GGGAGGG             TACCTTTTCGTTTGC  74 33
A1D48_RS04955  972399 ..  972410 +  -4.4  -2.64099   TATTGAACTGAAACC                TGTC GCAG GACA                 ATTATCATGACAACG  46 4
A1D48_RS04960 NONE
        gudD  975123 ..  975148 + -15.5  -3.54436   TGGTGCGTTAAGTCA         GAGCCGGTTCC GTAA GGAACCGGTTC          TTCTCTGGGTGTATG 100 30
A1D48_RS04970  976747 ..  976783 +    -5  -3.85698   TAAACTCAGCCGGTT   CC-GGCGCCATCAGGCGC GCT GCTAC-GTTGGCGCCAGG   TTTATAGCGCAGCAA  61 434
        rlmD  980498 ..  980524 + -10.9  -2.52464   CGCATGTAATGATTA        CC-GGCTTACCG ACTT CGGTAGGCCTGG         TCCCTTAAGGAGAGG  74 32
        relA  982835 ..  982864 +    -3   -4.1196   CAAAGCCGCATTAGC       CA-ACCCCATA AGCATGAGA TATGGGGTATG       TTTTCGACGTACATT  56 83
A1D48_RS04990 NONE
A1D48_RS04995  983353 ..  983384 + -11.1   -2.7044   CTTGATGTTTATAAA      GATATCTGGT-AGC TATCT GCTTACCAGATATC      TGGTATGGTTCCATG  74 36
        mazG  992773 ..  992783 +  -4.6  -2.88788   CGTCAAAAACATTTA                 CCTC AAA GGGG                 CTATTTTCTCCCTCC  48 100
        pyrG  994578 ..  994601 + -13.9  -4.08164   AAAAAGTTAGAACGG          CGGTGCACC CTCAGC GGTGCACCG           TTTGTCTGAAGTTTT 100 40
A1D48_RS05050  995972 ..  995985 +  -9.5  -5.77988   CTCTTAACGTAAAAA               CCCGC TTCG GCGGG                TTTTTTTGTATCTGT 100 53
        queE  996947 ..  996960 +  -3.8  -4.06533   TTTTTGCATCAAAAT               CAGC AAATTA GCTG                TTCTTTAATAATTTA  59 221
A1D48_RS05060 1001365 .. 1001380 +  -5.4  -3.36492   CATAAACGAGTGTCC              GTGCAGG CGG CC-GCAC              TTATGCCCTTCAGGC  53 388
        cysJ NONE
        cysI 1005397 .. 1005408 +  -3.6  -2.99471   GGGAATAACCTGAAT                TGCC GGAT GGCG                 TCTGTGTAGGCCTGA  45 33
        cysH 1006240 .. 1006256 +  -9.4  -4.32804   TGCTGCTATGAAAAA              TCCGGC AGGCA GCCGGA              TTTTAAATTAGTTAT  86 67
        casA NONE
        casB NONE
       cas7e NONE
       cas5e 1014639 .. 1014660 +  -3.1  -2.75074   AATGGGCCGTTGCAG           GAGAGA-ACA TAA TGTATCTTTC           TCGTATTCAACTCCG  43 14
       cas6e NONE
       cas1e NONE
A1D48_RS05135 1016890 .. 1016926 +    -5  -3.14522   CCTCAATCAACCCGG   CACGGAGTGTTCCCCGC GCCA GCGGGG-ATAAACCGAG    TTCGATATCCCTTAA  52 348
        cysD NONE
        cysN NONE
        cysC 1023329 .. 1023346 +  -9.8  -2.79831   GATCCTGAGACACCA             CCGGGC TTGTAT GCCCGG              TATGGTCAAGGTTAC  69 33
A1D48_RS05160 1023780 .. 1023806 + -13.8  -2.57344   CGGGTATACGTAACA         TCCGGCAAATGT GGT ACATTTGCCGGC         GTTGTCGCGGCAATC  86 110
        ftsB NONE
        ispD NONE
        ispF NONE
        truD NONE
        surE NONE
A1D48_RS05190 1027904 .. 1027927 +  -6.8  -3.21912   TGGGTTAAGCGTATC          GTGAACAC ATTTTCCC GTGTTCAC           TTAATGCGTTGCACG  59 116
        nlpD 1029170 .. 1029182 +  -3.3  -3.35996   CGTCAAGGGATCACG                GGTAG GAG CCACC                TTATGAGTCAGAATA  48 73
        rpoS 1030184 .. 1030227 + -14.8  -4.27117   CGCGAGTAAGTACCC TTGTCAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTTACCG TTTGTCTTCTGCCAG 100 32
A1D48_RS05220 1033150 .. 1033165 +  -3.2  -3.95986   GCGCTTTCCGGCAGG              CCGTCA TCGG TGACGA               TTTGGTTGAATTCCG  56 111
A1D48_RS05230 1034945 .. 1034958 +  -2.3  -2.74999   CTCTGCCTGGCGTCA               CGCCT GAGG AGCCG                TCATGTTAAAAATTG  40 3
A1D48_RS05235 NONE
A1D48_RS05240 NONE
A1D48_RS05245 NONE
A1D48_RS05250 NONE
A1D48_RS05255 1040407 .. 1040427 +  -3.9  -4.04174   CAGCGAGCGCGCGCT            GTCGACAGA AAT TTTGCCGGC            TTTGCTTATCTCCAG  58 310
A1D48_RS05265 NONE
A1D48_RS05270 1042784 .. 1042823 +   -18  -3.61371   AAAAGCCTGTTCCGG  CGCG-CAGACCCGATAGCG CGG TGCTATCGGGTCTGACACG  TTTACACTAGACTTT 100 40
A1D48_RS05280 1046376 .. 1046396 + -10.5  -3.25823   GTGGTTGGTCTTCGG            TGAGAGGCA GGA TGTCTCTCA            TTAATCTCCAGGAGC  74 440
A1D48_RS05290 NONE
A1D48_RS05295 1047875 .. 1047887 +  -4.9  -3.77303   CAGGGAGGGTTAATA                TTCTA TGA TAGAA                TTCTATGTTTGAATA  59 176
A1D48_RS05320 1051390 .. 1051405 +  -6.2  -3.64487   CCAGCTTTCGCTGAC              TCAGAA AACA TTCTGA               TTGTTAAAGGTGTAC  60 332
        invF NONE
        invG NONE
        invE NONE
        invA NONE
        spaK 1059426 .. 1059441 +  -3.2  -2.85078   TAGTCGGTCGCTAAT              GAGATG AAAA CACCTC               GTTTACTGCAATATC  44 19
A1D48_RS05365 NONE
        spaM NONE
        spaN 1062146 .. 1062160 +  -2.1  -3.12351   ATCTGGCGAGGAGGA               TGACG CCTGA TGTCA               TTGCGTGTGAGACAG  42 16
        spaO NONE
        spaP NONE
        spaQ 1064011 .. 1064030 +  -3.6  -2.76037   CTGGCGTTGGCTAAG            GGGTAAAA AATG TTTTACGC             GTTGTACTTTGAAAT  43 20
        spaR NONE
        spaS 1065924 .. 1065934 +  -2.4    -3.767   TGAATGTTCACTAAC                 CACC GTC GGGG                 TTTAATAACTGCATC  51 81
        sicA NONE
        sipB NONE
        sipC 1069554 .. 1069610 + -13.7  -3.34806   GCTTAATCTGAAAGG TCATCTATACGCCATCAGGGGTGTGAT TTA ATCGCGCTCCTGATGGCGAACTGGGGA TATTATGCTTAATAT 100 35
        sipD NONE
        sipA 1072703 .. 1072717 +  -2.1  -2.60075   TTACTACCGTTGATG              GCTTGC ACAT GCA-GC               GTTAATTAACCGGGA  39 6
A1D48_RS05430 NONE
A1D48_RS05435 1073286 .. 1073297 +    -3  -2.90075   AATTTGAAGAAGCAA                TCTT ATAA AAGA                 TATAATTCAAGAGGA  42 18
        sicP NONE
        sptP 1075339 .. 1075372 + -14.9   -3.3568   AAGCTGATAAAAAAA     TAGCTTACTTTTAGA ACTA TCTGAAAGTAAGCTA      TTCCTGTCTCATTAT 100 34
        prgH NONE
        prgI NONE
        prgJ NONE
        prgK NONE
        orgA NONE
        orgB NONE
A1D48_RS05495 1084065 .. 1084078 +  -2.3  -3.17982   AAAGAGGCAATTGAC               TGGTG AACC CCCCA                TTGCTGGCGATTTGT  44 20
        sirC 1085301 .. 1085315 +  -2.2  -4.15106   CGTACGATGAACCAT               TGATTT GTG AAATTA               TTTTAAACGTTACTA  55 23
A1D48_RS05505 1086546 .. 1086564 +    -6  -3.90048   AGGTGATTGGTTGCC             TGGCTCAA TCA TTGAGGCA             TATTTTTGCGGGCAA  66 128
        avrA 1087943 .. 1087954 +  -2.2  -2.77043   GCAGTAGCGTGGTAT                TCAG CCCG CTGG                 CTTTCGCCTGGTGCG  39 456
A1D48_RS05535 1091706 .. 1091716 +  -2.4  -4.25104   TTAAGCCCCAGACGC                 TGCG CCG CGCC                 TTTTGGTCCAGCCAC  60 163
        hycA 1098310 .. 1098340 + -12.6  -3.65542   CGTTGCCCGCTTTGA       TTCGCGATGTGGCG TTG CGCCACGTCATGAA       TGTTTTGGGAATGGG  95 49
A1D48_RS05580 NONE
        hycC NONE
A1D48_RS05590 1101771 .. 1101789 +  -3.7  -2.90992   TGCGTTTTTAGCCTT             CGTCTCC TTGCT GGCGGCG             TGATTTAAGAGAGTT  46 4
A1D48_RS05595 NONE
        hycF NONE
        hycG NONE
        hycH NONE
        hycI NONE
A1D48_RS05620 1106608 .. 1106620 +  -7.7  -3.31144   CACTGGCGACATTAC                GTGTC ATC GACAC                TTGTGACGATGACAC  65 91
        hydN 1107336 .. 1107347 +  -5.8  -3.34962   GCATTGCCGGATGGC                GGCA TCAA TGCC                 TTATCCGGTCTACGG  56 73
        hypF 1110157 .. 1110183 + -14.4  -3.54424   CGCCGCGGTTGACGG         CTACTCCGGCGC GGC GCGCCAGAGTGG         TTTCCGGGCGTAAGC  95 508
        norR 1114087 .. 1114100 +  -2.3  -4.25283   GCAGGTTAATGGCGC               CGGTG AGTT TGCCG                TTTTCATCGACCACT  60 66
        mltB 1120445 .. 1120470 +  -9.8  -3.89505   GCGCTAATTTACGCT         TAG-GGAGGGG AGCAC CCCCTCCGCTA         TTATTATGGCTTTTT  81 34
        pncC 1121413 .. 1121432 +    -8  -2.84098   CTACAAAACACTTGA            TACTGTAT GAGC ATACAGTA             TAATTGCTTCAACAG  61 26
        recA 1122625 .. 1122644 + -11.4  -4.26189   TTAAATTACCATCAA            GGGCTGCA TTTA TGCGGCCC             TTTTGGCATTTCTCC  93 92
        recX NONE
A1D48_RS05710 NONE
        alaS 1126059 .. 1126080 + -17.3   -3.6502   ATAAGTGTTCGTTGG           CGCCGCAGC CCGT GCTGCGGCG            TTTACGTCAACGCTA 100 43
        csrA 1126487 .. 1126501 +  -4.2  -3.35679   TCTCACTTTTCGGGT               GAGACG CAG CCTCTC               TTCTCGCTCGCCCGC  50 51
A1D48_RS05730 NONE
A1D48_RS05735 1126929 .. 1126939 +  -5.4  -3.27029   GTTCGAATCCTCCCG                 GATG CAC CATC                 TCTTACTTGATACGG  54 17
A1D48_RS05740 1127067 .. 1127077 +  -5.4  -3.27029   GTTCGAATCCTCCCG                 GATG CAC CATC                 TCTTACTTGATACGG  54 17
A1D48_RS05745 1127205 .. 1127217 +  -7.7  -2.63723   GGTTCGAATCCTCCC                GGATG CAC CATCC                CTTACTTGATACGGC  59 16
A1D48_RS05750 NONE
        yqaB NONE
A1D48_RS05760 1128608 .. 1128625 +  -3.5  -2.76171   ATTGTAGGTTTGGCA             TGT-ATGG CTG CCATTACA             GTTATGCTTATTAAA  43 43
        gshA 1130324 .. 1130340 +  -2.2  -4.85782   TACTCAGACTCGCCC              CGGAAC AAAGA GTTCAG              TTTATTTTTAAAAAA  66 126
        luxS 1130923 .. 1130941 + -10.2   -5.5604   CAGTATTTAAATTAA             CCCCGGTT TAT GGCCGGGG             TTTTTTATTGCTTAA 100 60
A1D48_RS05775 1132624 .. 1132639 +    -9  -4.41206   TGGTCTACTAAAAAA              GGGATC CGCA GATCCC               TTTTATCAGATAGTT  85 45
A1D48_RS05850 1147552 .. 1147563 +  -7.2  -3.16564   CGATAAAAATCCCTA                CCGC TGCG GCGG                 TTCCTACGCTACACC  59 150
A1D48_RS05860 1148351 .. 1148378 +   -12  -3.18199   AAAAAACCGACTAAA        AG-CGCGACTGGC AAT GCCAGTCGCGACG        TTAACTTACGCCTTA  83 27
        stpA 1150276 .. 1150286 +    -4  -4.57073   GTGACATCTGCTGCT                 TTGA GGA TCAA                 TTTTTCGCCCGGCTC  69 167
A1D48_RS05895 1151673 .. 1151690 + -14.1  -3.31263   AATTACCGGCCACCG             GCGGCGC ATAA GCGCCGC              TTATCAGGATAACCT 100 39
        lysM 1152271 .. 1152290 + -13.6  -2.62192   GAATAATGGGAATCG            GCGTCAGC AAAT GCTGACGC             ATTAATTCGCTGGCG  78 88
        tctD NONE
A1D48_RS05960 1165042 .. 1165063 +  -2.9   -4.2717   AGCACGTTTACAAAA           AGTCGCATC TTGA GGTGTGACG            TTTTAATCAAATGAT  58 65
A1D48_RS05965 1166170 .. 1166200 +  -9.8  -2.59876   TCTGTAAAAATAGCA       TTTCGGCAGTGGTG TCA TATCATTGCCGAAG       CATTTTATCTCCTGA  68 47
A1D48_RS05985 1170603 .. 1170630 +    -7  -2.71369   GCAATGTAAGAATAA        CTATCTGCTACT GAAT AGTAGCTGAGAG         TAAATTATTTACAGT  55 68
A1D48_RS05990 1171079 .. 1171115 + -17.5  -4.07687   TGATGGTTTTCTGTC    TGCAAAGCGCCTGATAA TTA TTACCAGGCGCTTTGTA    TTTTGGAGCCAACAT 100 38
A1D48_RS05995 1173777 .. 1173799 + -17.8  -3.29043   CTCGTTTTGATGGAT           TATGCCCGCC GCT GGCGGGCATA           TTCTGGCGGCGGGTT 100 31
A1D48_RS06035 NONE
A1D48_RS06050 1188903 .. 1188924 +    -8  -4.16016   AACATAATTGAAAGT           CTCGTCAG TTTATT CTGGCGAG            TTTCTTAAAGACTGG  76 39
A1D48_RS06090 1208755 .. 1208774 +  -5.8  -3.51825   GTTCGCGCCAAAGAG            GTTTA-CCG TGC CGGATAAAC            TTGTGGTTGAAGTGG  57 8
A1D48_RS06095 1209224 .. 1209234 +  -2.4   -3.1997   ATCACAAAATTACTT                 CGTC AAC GCCG                 GTTTGTTATCAATAT  44 197
        grpE 1213053 .. 1213073 +    -9  -5.53288   GAAGTAAAAGTCTGA            TGGCCGAT GTAAA GTCGGCCA            TTTTTTTAGCTTAAA 100 34
A1D48_RS06145 1217689 .. 1217716 + -13.4  -4.43307   GCTTTTAATATGACG        CCGGGCTCCGTT CCTC GATGGGGCCCGG         TTGTTTTATTCACAC 100 285
        rpsP NONE
        rimM 1218540 .. 1218550 +  -2.4  -3.33744   TACTATCGAAGTAGA                 CTGG GAT CCTG                 GTTTTTAAACCACCG  45 7
        trmD NONE
        rplS 1219799 .. 1219821 + -10.5  -5.33866   GCTTGTAGAAAAGAA           GGGGCTGGC ATTAC GCTGGCCCC           TTTTTTATGGGTTTG 100 66
        aroF 1223152 .. 1223168 +  -2.3  -2.52933   TGGCGGTGCGCGTCG              CATAAGA GGT TGTTATG              GTTGCTGAATTGACC  39 21
        tyrA 1224308 .. 1224322 + -11.4  -5.37593   ACATCTATACTAAAA               GCCAGC TTT GCTGGC               TTTTTTCGTTTAAGG 100 46
A1D48_RS06190 1225628 .. 1225654 +  -4.3  -4.67353   GCTGCCGAGCGCCGC         GACGCGCGG AGAGTTTGC CTGCGCGAC         TTTTTCCATCGCTGC  71 400
        rluD NONE
        pgeF 1229885 .. 1229899 +  -5.7  -3.83998   TTCACCTTGAATAAT               TGAGG GATGA CCTCA               TTTAATCTCCAGTAG  61 98
        clpB 1232535 .. 1232552 + -10.5  -5.27335   CAAATTTGAATAAAA             CGGGCCC TGAC GGGCTCG              TTTTTGTTTAAAAAC 100 45
A1D48_RS06230 1234531 .. 1234544 +  -2.3  -2.72471   AAGAAGCGTACTTTG               CAGTG CTCA CACAG                ATTGTCTGATAGAAA  40 34
A1D48_RS06235 1234707 .. 1234742 +  -9.2  -4.00532   AGGCGTTGCCATCAG    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
A1D48_RS06240 1237814 .. 1237826 +  -3.3  -3.05816   AGAGATGATTTTCAG                CACTG ATT CAGAG                TTGAGTACGCAATAA  45 56
         rrf 1238096 .. 1238127 + -13.8  -4.63586   AGGCATCAAATTAAG      CAAAAGGCTCAGTC GAAA GACAGGGCCTTTTG       TTTTATCTGTAGTCT 100 37
A1D48_RS06255 NONE
A1D48_RS06260 1240471 .. 1240497 +  -6.6  -3.19463   TCAAAGAAAACATCA        GCCCT-ATCGC TGCGCT GCGGTCAGGGC         TTACTCCCTGGTGAC  56 165
A1D48_RS06290 1247359 .. 1247372 +  -9.5  -2.57344   CGCCCGGTCAGACAA               GGCGC TTTC GCGCC                GTTATCCGGGCGATA  68 93
        grcA 1248819 .. 1248843 + -16.5  -5.34857   ATCCGGTAATAACAA          GCGGAAGAGGC CGG GCCTTTTCCGC          TTTTGTTTTATTTGG 100 46
A1D48_RS06310 1250439 .. 1250460 + -14.5  -3.44206   TGGAAGATAAAAAAA           TGCCGGGTT AACG AACCCGGCA            TTATCATCACTCTTC 100 15
A1D48_RS06320 1252737 .. 1252749 +  -3.3  -3.36991   ATCCAGCGTAAAGTG                CAGCC CCC GGCTC                TCTTTACGCATCATC  47 94
A1D48_RS06330 NONE
        rseD NONE
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 1257452 .. 1257462 +  -4.6  -3.63744   CAACATGCGCTTTTC                 CTGC GTT GCGG                 TGTTTTACAGGAAAA  55 88
        lepA 1259455 .. 1259467 +  -3.4  -3.64609   TCCCTAAGGAGTTGG                CATG GCGAA CATG                TTTGCCCTGATTCTG  51 41
        lepB 1260448 .. 1260480 + -17.2    -4.015   GTGACGAAATGATCG     TTCACGCTGCCGTCT TTTT AG-CGGCAGCGTGAA      TTATTTCCTGGATAA 100 43
A1D48_RS06375 NONE
         era NONE
        recO NONE
        pdxJ NONE
A1D48_RS06395 1264578 .. 1264603 +  -3.3  -4.39329   ACGCCTATTTTCTGC         TCGG-GCCAG CTCTTTT CTGGCGCTGA         TTTGTTATCTACAGT  62 454
A1D48_RS06410 NONE
A1D48_RS06415 1267743 .. 1267771 + -11.8   -4.0896   GCGCAATAAACTTGA        TGGCTCTTCTGC ATGAG GCGGAAGAGTCA        TTTTCAAACCAGTTT  93 32
        murQ NONE
A1D48_RS06430 NONE
        yfhb 1271647 .. 1271659 +  -3.3  -3.02471   CAGCTCGAATAGTGA                AACGC ATA GCGTC                TGTGTATAATGCCGC  45 29
        tadA 1272541 .. 1272551 +  -3.2  -4.74103   CCGTAGGTTAGCTTA                 CTGT AAT ACGG                 TTTTTGGCTTAACAG  70 347
        purL 1277977 .. 1277995 + -11.7  -5.24129   CCCGATAGCCATTAA             GCCCCTC TTCAC GAGGGGC             TTTTTTGTAGACGGC 100 45
        qseE NONE
        qseG NONE
        glrR NONE
        glnB 1283051 .. 1283062 +  -5.8  -3.36991   CAGACGCGCAGCACC                GAGC GGGC GCTC                 TCTTTCGGGCTGCTC  56 525
A1D48_RS06505 1292594 .. 1292632 + -12.5  -3.69621   ACTTATGCGCCATAA  CG-TGACGCCGCCGGA AGTCATTA TCCGGCGGCGTTGCCG   TTTGAACTTCTCCCT  95 90
A1D48_RS06510 1293987 .. 1293999 +  -4.7  -4.57073   TCAGCGCTACGCCGC                GCGGG CAT CCCTC                TTTTTGAAACGCCTG  71 148
A1D48_RS06520 NONE
A1D48_RS06525 1297142 .. 1297154 +  -9.1  -4.77438   GAGGAAGAGCTTGCC                GACGC GCG GCGTC                TTTTTACTGGTGCGT  93 290
        trmJ 1302665 .. 1302678 +  -3.9  -2.71681   TAAATACCTGACTAA               TTTAC TCAA GTAAA                TAGTTGACCAAATTA  45 65
        iscR 1303425 .. 1303448 +  -2.4  -2.72144   AGCCGGTTGCCTGAT          TCCTTGCATT GAGT GATGTACGGA           GTTTAAGAGCAATGA  40 171
A1D48_RS06565 NONE
        iscU NONE
        iscA 1305578 .. 1305604 +  -8.7  -4.30719   AGTAAGAAGGTATAA        CCCCAC-CGTGG TCGC CTGCGTGTGGGG         TTTGTTCTGACAGGC  84 163
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 1308573 .. 1308594 + -15.1  -3.78775   GAGTAAGTCAAATAA           CGGGCTGCC CTAC GGCGGCCCG            TTTGCTAATAAGGAA 100 35
        pepB 1309916 .. 1309941 + -11.1  -3.12395   ACGGTGTTTTTGTAG         GCCGGGTAAGCG AAG CGCC-ACCCGGC         ATTTTGCCTGATGGC  76 41
        sseB 1311239 .. 1311254 + -10.4    -5.626   ACCAGCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGGCCTG 100 478
A1D48_RS06635 NONE
        pbpC 1320548 .. 1320562 +  -4.4   -2.5409   GTCAGGTTGCAGCGG               TTAATT TTG AATTAA               TACGTTAACCATTCT  46 3
A1D48_RS06645 NONE
        dmsB NONE
A1D48_RS06655 NONE
A1D48_RS06660 1325420 .. 1325430 +  -2.6  -3.09878   CTAATGCTCATTTTA                 TTTT AAA AAAA                 TGTTACCTGCATCCA  43 50
A1D48_RS06665 1326064 .. 1326096 +  -4.1  -5.04249   ATTTGTACAATGCAG     CGCCCCCGGACGAGC AGTAA GCTTA-CC-GGGGCG     TTTCTTTTTTCAACC  76 142
   trmG/rlmN 1327493 .. 1327503 +  -6.8  -3.50045   GTTTTGTCATCTGCG                 GCCT GAC AGGC                 TTATACTGTCTGACT  62 198
        rodZ NONE
        ispG 1329770 .. 1329790 + -13.3  -3.00298   AAAATAAGAACGTGA            TGGGAAGCG GCG CGCTTCCCG            TGTATGATTGAACCC  86 34
        hisS NONE
A1D48_RS06695 NONE
        bamB 1332996 .. 1333016 + -11.1  -4.60746   GTGCGTTTTAAAAAA            CGGCTCCTG GTG TAGGGGCCG            TTTTCCTGTTTTTAA  95 52
         der 1334580 .. 1334607 + -10.6  -3.60296   TTCAGTAATATTCCA        GGCCTGACAAGCG CTG CGCTA-TCAGGCC        TTTCAAGTAAAAGTG  83 47
A1D48_RS06710 1334879 .. 1334911 +  -7.7  -3.31144   AATAAAACCGCTGTC     GACGTT-GCGCCGC AGAGCA GAGGCGCCGACGTC      TTATCCGGCTAAGGG  65 36
        sinH 1337408 .. 1337438 +  -6.9  -2.71712   TAGCCAGAAATAGCG      TCAGCGTTATGGCT GACC AGCCA-GCCGCTGA       ATTTGGAGAAAAAGG  55 28
A1D48_RS06720 1338439 .. 1338462 + -15.4   -4.0896   AAGTTGTCCTCAACA          TACCACTCCC CGCG GGGAGTGGTA           TTTTCCGCGCACTTT 100 39
A1D48_RS06725 1344154 .. 1344168 +  -2.7  -3.77087   GGTGCCGTAGTGAAT               GGGGC CGGGA GCGCC               TTTGAATGTTGGGTG  52 31
A1D48_RS06730 1344546 .. 1344559 +  -8.1   -4.0641   TTAGGCTGGCCGACG               CAGGG CTAT CCCTG                TTTATCTAAATCAAC  74 37
        shdA 1350535 .. 1350557 + -14.1  -4.08216   GTAAGTTAGACAAAA           CCGGGCGGG TATTC CCTGCCCGG           TTTTGAGGCGAATGA 100 37
        guaB 1353668 .. 1353691 + -13.9  -4.56113   GGCTCCTGATTTTCT          TCGCCCGAC CTTCGC GTCGGGCGA           TTTATTTAATCTGTT 100 32
        guaA 1355357 .. 1355376 + -12.2  -5.42975   TAAAGGTGAATTTAA            CCCTCTGT TTTT ACAGAGGG             TTTTTATTTATGTGC 100 74
A1D48_RS06765 1358294 .. 1358304 +  -3.2  -4.91511   GTTGCACCTGCACAA                 TCGG AAC CTGA                 TTTTTATACTGGCCT  72 91
A1D48_RS06775 NONE
A1D48_RS06780 1359567 .. 1359586 +   -10  -5.42975   TAAAAGTGAATTTAA            CCCTCTGT TTTT GCAGAGGG             TTTTTATTTATGTGC 100 268
A1D48_RS06800 1361224 .. 1361241 +  -4.8  -4.09685   TTCACCGGTCAGACG             CAGTGC CCCGTA GCGCTG              TTTTGCCCGGTGAAG  63 459
A1D48_RS06840 1365269 .. 1365280 +  -4.4  -2.90797   TTTAATAATTACAAT                CGAT GACT ATCG                 TGTGATGTATATCGC  48 20
A1D48_RS06845 1367684 .. 1367694 +  -3.2  -4.41633   CCAGTTACCGCTTCC                 CAGT ACT GCTG                 TTCTTTTTCCAGATC  64 125
A1D48_RS06870 1374155 .. 1374173 +   -11  -5.81412   AATAAATAATTAAAA             GCCGACTT TAA GAGTCGGC             TTTTTTTTGAATAAA 100 44
        uraA 1375521 .. 1375541 + -18.3  -3.58726   ATCAGTAACGGGTTG            CCGGGCAGC GAT GCTGCCCGG            TTCTATCTCAAGGGA 100 33
         hda 1376458 .. 1376487 +  -2.8  -4.39828   GGATTAACGCCTCTT       CAC-TCAGCTGGC TATCC GCCAGGTGAAGCG       TTTTATAGAGATCTT  64 174
A1D48_RS06895 1379582 .. 1379601 +  -9.3  -5.29445   CGCTCTTTTTTTTAA            TGCCGCA CCGTGT TGCGGCA             TTTTTATTGTTGGAA 100 134
A1D48_RS06900 1380973 .. 1381001 +  -9.6  -2.89881   GCGGGTTTTTCCATA       CTGCGCGCTCCAT GTTA AAGGAG-GCGCAG        TATATGACGTCGATA  70 61
A1D48_RS06905 NONE
A1D48_RS06910 1383433 .. 1383461 +  -8.8  -3.10843   ACGGCGCATTCTCTT       TC-CAGGCCGCAC ATCA GCGCGGCCTGAGG        CTTTTACGCGTTTTC  66 40
        dapA NONE
        bamC 1386590 .. 1386609 + -11.4  -5.31275   ACAAGTAATTTAACA            GGGCTGGA GTAA TCCGGCCC             TTTTTTCTGATAAGA 100 33
        purC 1387483 .. 1387504 + -13.7  -2.90054   TAATTCCGCTTCTGA           CCGGAGGGC AACC GCTCTCCGG            TATCATCCTTTCCTC  87 38
A1D48_RS06940 1388473 .. 1388484 +  -2.2  -2.64735   CTTTTGATAAACCGG                GGCA GGGA TGTC                 TGATATCGATGCGCT  39 34
        tmcA 1390491 .. 1390524 +  -4.6  -3.81926   GCGGTGGGAACCATA     CCGGATAGCGATACC TGTCC GGCAT-GATATCCGG     TTACTTTTTCGGCTG  58 18
        ypfM 1392753 .. 1392773 +  -8.3  -5.24129   TAGGGGATAAGAAAA            GGCGACT CAACGAA AGTCGCC            TTTTTTGTGCCCGAC  95 51
A1D48_RS06985 1400099 .. 1400111 +  -9.1   -3.5393   CGATAAACATTTTTC                CGTCG GGT CGACG                TTTAACAGGCCTGAT  73 165
        nudK 1402493 .. 1402504 +    -3  -3.53012   TGGACTGAAAAAAAA                GAAA TATA TTTC                 TTTACACAAAAAAGA  48 33
A1D48_RS07005 1403634 .. 1403649 +  -5.4  -3.11955   CGGATGCCTGGCCTA              CGCTGTG GAT CAC-GCG              TTGAATCCTGGTTGT  52 6
A1D48_RS07010 1404093 .. 1404103 +  -2.4  -4.59511   CCTTTGATGTTCAGC                 ACCC GGC GGGC                 TTTTTCCACAATATT  64 107
A1D48_RS07030 1409618 .. 1409635 + -12.7  -5.60993   TTACTCTCTCTTCTG             GCGCAGG TTCT CCTGCGC              TTTTTTTATGCGCCG 100 48
        eutS 1410333 .. 1410347 +  -2.9  -3.15861   TTTACCCTGTGTGAG               TTAAC AAAAA GTTAA               TTGGTGGCGGTAATG  45 11
        eutP NONE
        eutQ NONE
        eutT NONE
         pta 1413321 .. 1413338 +  -2.6  -2.83403   CACTGGTTGAATGAA             CGGTCC CGTTCT GGACCC              CTTTAATGAGAGGAA  41 27
        eutM NONE
        eutN NONE
A1D48_RS07070 1415447 .. 1415457 +  -6.8  -3.48924   ATGCGTGCTGGTGGA                 TGCG TTT CGCA                 TTGTATAAGGGATGA  62 7
        eutJ NONE
        eutG 1417559 .. 1417570 +  -5.8  -3.33261   GTTAATGCCGGAGGC                GACG TAAA CGTC                 TTATCCGGCTTACAA  56 92
        eutH NONE
        eutA 1420229 .. 1420246 +  -4.1  -2.58544   GAAATCACTCGCATT             TCCTTCC TGAG GGAACGA              CTTATGAAACTAAAG  44 16
A1D48_RS07095 NONE
A1D48_RS07100 NONE
        eutL NONE
        eutK NONE
        eutR NONE
A1D48_RS07140 NONE
A1D48_RS07145 NONE
A1D48_RS07150 1430296 .. 1430313 + -11.3  -3.68359   AATAGCCTCCATTAA             TGCCACG ACTG CGTGGCA              TTCTCATTTTCAGGA  87 81
        yfeX 1431337 .. 1431354 + -12.7  -5.48825   GCATAAAAATGCCCA             TCCCCGC CTCC GCGGGGA              TTTTTTTACCTAATA 100 128
        ucpA 1432274 .. 1432301 + -14.2  -3.84992   TCTGATTGATGCCGG        TCTCCTCCCCGCG CCG CGTGGGGAGG-GA        TTCTCTTATTCCCTT 100 36
A1D48_RS07165 NONE
        cysT NONE
        cysW NONE
        cysA 1436255 .. 1436280 + -13.3  -5.02074   ATTTGTATAGTTATC         GCCCGGTG-GCG CTA CGCATACCGGGC         TTTTTTACGAGCTGA 100 48
        cysM 1437361 .. 1437375 +  -2.1  -5.10765   AAAAATAAACAAATC               GATCG TATTT TGATC               TTTTATTATTTGTTT  71 175
A1D48_RS07190 NONE
        pdxK NONE
A1D48_RS07225 1443500 .. 1443517 + -12.7  -3.67597   AACAGGCAAAAAAAA             TGGCGCC CAAA GGCGCCA              TTCTTCACTGCGGCA  95 138
        zipA 1449650 .. 1449666 + -10.8  -5.38249   ACATTTTTAACGTAA              CCCCCG CCTGT CGGGGG              TTTTTTATCATTGAT 100 57
        ligA NONE
A1D48_RS07265 1452077 .. 1452106 +  -4.1  -5.40072   ACGTCGGAAACAGAA       TATTGGCCATCGG GATC CCGTTGGCCAGGC        TTTTTTTCGAACCGC  86 177
A1D48_RS07275 1453968 .. 1453993 +  -9.7  -3.06815   GTGTGAGGTGCGGTC         TTGCCCTGCCA TTTT TGACAGGGCAG          TGTGTTAAAACAGGT  71 57
        xapA 1455863 .. 1455877 +  -9.2  -4.03234   AACACAATGACTACG               GCCCCG TAT TGGGGC               TTTATCTCACGGCAA  80 40
A1D48_RS07290 1457166 .. 1457195 +  -8.6  -4.82901   GCACATTAATTTTAT       TTGACTGGCGAG AGGATG TTCGCCAGTCCA        TTTTTATGAACAAGG  89 32
A1D48_RS07295 1457370 .. 1457380 +    -4  -2.82933   CGTTAAATCTATTTT                 TTAC TAG GTAA                 TATGGTAAATTCCAG  45 19
A1D48_RS07300 1458451 .. 1458465 +  -9.2  -5.17576   GCAGATAGCAAAAAA               GCGCCT TTA GGGCGC               TTTTTTACATTGGTG  93 164
        gltX 1460563 .. 1460591 + -13.3  -4.24413   CCAGCTGAAACAGAA        TAAACGGCAGG GCAGACG CCTGCCGTTTA        TTATTTGTTAGTCCG 100 43
A1D48_RS07345 NONE
A1D48_RS07350 1461780 .. 1461799 + -11.4   -5.2197   CCACCAATATTCGAA            CCCTCGCT GAAA AGCGGGGG             TTTTTGCTTTTTGTC 100 35
A1D48_RS07355 1464165 .. 1464182 + -12.7  -3.97368   AGCGGCATAAAAAAA             CCGGGGA TAGC TCCCCGG              TTTCTACATTAAACG 100 40
        mntH 1467007 .. 1467031 + -12.2  -3.38812   ACAGAAAGATAGCAG         GCCCGATG-CG TGGG CGTCATCGGGC          TGTTATTCAGCAGGA  85 43
A1D48_RS07385 1470695 .. 1470707 +  -4.8  -4.29929   CCCGCGCCCAACGTC                TGGC TAAAC GCCA                TTTGTTGCATTTCGT  66 400
A1D48_RS07395 1472853 .. 1472869 + -13.7  -5.66868   CTTGCCAGTCTCAAA              CCGCGTG CCT CACGCGG              TTTTTTTCATTGCTT 100 134
A1D48_RS07400 1474715 .. 1474734 + -13.6  -5.33026   GAGTAGAAAAGCAAA            CAGGAGCC CCAT GGCTCCTG             TTTTTCTTTGCATTG 100 35
A1D48_RS07415 1477103 .. 1477127 + -20.1  -3.01712   CGATGTCAGGGAACA          GAAGCGCCGAC AAT GTCGGCGCTTC          TGTTCCCCGGGAAGG 100 215
        pgtC NONE
        pgtB NONE
        pgtA NONE
        pgtE 1484628 .. 1484659 +  -8.7  -4.72986   TCTAGACCACATCAG      GATGTCATCGGTC ATAACC GGCCGATGACGAC       TTTTTGCTGAACGTG  89 36
        mlaA 1486927 .. 1486945 +   -11  -4.76041   GGCAGTAAATAAAAA             GGTGAGCG CAA TGCTCACC             TTTTTGATCCGTCTC  95 43
A1D48_RS07475 1488943 .. 1488979 +  -9.4  -5.66684   GTTAATCCGTTCATT    CACGACGCCTCCGTCA TCATC TGGCGGAGGCGTTTTC    TTTTTTTGTCGCTTC 100 36
        fadI NONE
        fadJ 1492693 .. 1492706 +  -3.1  -4.56597   ATGGATAAGGCACAA               TGCCGG CCA CCG-CA               TTTTTGCCGCAGCCA  64 151
        sixA 1493414 .. 1493427 +  -9.5  -2.84325   TCAACACCAGCAGCG               CGGCG TCGC CGCCG                TACTCTTTCGGCGCC  64 178
        prmB NONE
        aroC NONE
        mepA NONE
A1D48_RS07515 NONE
A1D48_RS07520 NONE
A1D48_RS07525 1498634 .. 1498661 + -11.2  -3.08798   CAATAACGCCGTGGG        CCGGAAGGCGAC GCTT GCCGCCTTCCGC         TATTGACTGACCCAT  79 35
        fabB 1502085 .. 1502104 + -13.6  -5.26875   GTATCAATAATGAAA            CAGGTCGC TAAT GCGACCTG             TTTTTTCATTCAGGG 100 60
A1D48_RS07540 1502847 .. 1502866 +  -4.2  -5.22794   TCTCCGGTGCGAACA            AGAGACCG ATGG CGGTTTCC             TTTTTTAATGCTTCT  79 68
A1D48_RS07560 1504458 .. 1504494 +  -8.6  -2.60212   AATCCTGACGTTCAG    GTAGAGGGGGGCGTGG CCTTT CCCCGCCTTACTCTGC    ATTCTGGAGTAATGC  63 153
A1D48_RS07565 1505942 .. 1505969 +  -4.9  -4.17048   GGGCATACTCTTTGA        TCGCTGTGAGCT CGTCC GGCTCA-AGCGG        TTGTTTTAACGCAGC  62 279
        pdxB 1507939 .. 1507968 + -11.5  -3.80279   TAATGTCTTCTTAAT       GC-TCCCTGTCGAA TAA TGCGACAGGGACGC       TTATGTATTTCTGGA  91 38
A1D48_RS07580 1508987 .. 1509004 +  -4.1  -2.62184   ATTGCGGAGAAGCTG             GTGCAGG AGTA TCTGTAC              TGATGTCCGGACAGC  44 5
        truA NONE
A1D48_RS07590 1510539 .. 1510551 +  -3.3  -5.24531   ATAGAAAGTAACTCA                GCGGT TCG ACCAC                TTTTTTATCCAAAGT  77 37
        accD 1511598 .. 1511630 + -17.1  -3.06515   TGAGGCCTGATAACT      GAAAAGGGCAGGGCC GCA GGCTCTGCCCTTTTG      CTTTTCACCGTAAAG 100 31
        folC NONE
        dedD 1513775 .. 1513800 +  -9.8  -5.27938   AGATAAAAAGTGTGA         TGGCGTTGAA TATTTT TTCAGCGCCA          TTTTTATTTACGCGT 100 208
        cvpA NONE
        purF 1515987 .. 1516014 +    -4  -5.06735   CTGGCCGATGTCAAT        TACGCAACACGC CGAA GCGAATAGCGTA         TTTTTGTACTTTGTA  76 66
A1D48_RS07625 NONE
A1D48_RS07630 NONE
A1D48_RS07635 1521641 .. 1521665 + -14.9  -2.62613   ACGCGTTAACGCATA          ACCGCCGCGGC TAT GTCGCGGCGGC          ATCTTTGACCTCACG  89 32
A1D48_RS07640 NONE
A1D48_RS07645 1523733 .. 1523751 + -13.2  -4.37092   GCATTATTGTCCCTG             TTGCCCTG TTT CAGGGCAA             TTTTGTAACCGCGAT 100 58
        argT 1524809 .. 1524832 + -10.4   -4.7497   CTGGGGAACTATCAC          GGTGCAAAAT AGAT GTTTTGCACC           TTTTTGGTGCATAAG  91 63
        hisJ 1525898 .. 1525909 +  -7.2  -2.62184   CTGACAAGGCATAGC                CGCC ATCC GGCG                 TGATGTGAGGCAAAA  57 132
A1D48_RS07665 NONE
A1D48_RS07670 NONE
        hisP 1528260 .. 1528272 +  -9.1  -4.07568   GAAATGCGAATCCGG                CGGCT TCA AGCCG                TTTTGGCAGCGCCCG  80 136
A1D48_RS07690 NONE
A1D48_RS07695 1531317 .. 1531333 +  -2.9  -2.73124   ATAAGAAGGTTTCCT              GATGGTG GAA CAGCGTC              GTTTGGCAAGTACGG  41 81
        yfcD 1531903 .. 1531932 + -10.1  -3.74224   TCCCGCATACATAAA       CTGGAGGCGATGGA TTT TCGATCGC-TCCAG       TTTCCCTGATTTAAC  80 56
A1D48_RS07715 NONE
A1D48_RS07720 NONE
A1D48_RS07725 NONE
A1D48_RS07730 NONE
A1D48_RS07735 1537144 .. 1537172 + -11.8  -4.30416   TAATCATGGAGATAT       TGCCGGATG-GCG CTGA TGCTCATCCGGCA        TTTTGGATTAATGAT  95 38
A1D48_RS07755 1543160 .. 1543179 + -10.8  -5.52384   ATTACGCATATAAAA            GAAGGCAT ACCA ATGCCTTC             TTTTTTTCATCGCCA 100 51
A1D48_RS07760 NONE
A1D48_RS07765 1544392 .. 1544409 + -14.1  -2.70946   CCTGATCATGATATC             GCCCCGC TTTG GCGGGGC              ATATTTATGGCAGAA  87 36
A1D48_RS07770 1546659 .. 1546680 +  -4.3  -5.10497   TCATCCGGCGCCATA           TCAACCAGC TTTT GCTGGGCGA            TTTTTTCGATCGCTT  80 400
        lrhA 1550194 .. 1550227 +  -9.6  -5.61596   TAAATGTAAAATAAA     GAGCCGCTG-GCGAT GAAAA AACGCTCAGTGGCTC     TTTTTTTGTGCCCAT 100 66
A1D48_RS07800 1550676 .. 1550694 +  -2.4  -6.13503   GCTGTTTTTATCATT             TTCTACAG TAA TTGTAGGG             TTTTTTTTATTCCTC 100 314
        nuoA NONE
A1D48_RS07810 NONE
        nuoC NONE
        nuoE NONE
        nuoF NONE
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK 1560771 .. 1560786 +  -2.5  -3.18199   TTCAGTAAGTGAGAT              GCGTG GATGAA CATGC               TTGCCTTAACCATTA  45 16
        nuoL 1562692 .. 1562710 +    -3  -2.80966   AAAGGAATAAAAATC             GCCATGTT ACT ACCCTGGC             TAATATTGATTCCCT  41 99
        nuoM NONE
        nuoN 1565764 .. 1565780 +  -9.5  -3.29829   CCGGAGCCTCTAAAT              GTTGGAT TGC ATCCAAC              TTATGAAAACCTGTG  74 101
A1D48_RS07870 1575316 .. 1575327 +  -7.2  -3.30771   ACATTTATGCCGGAT                GGCG GCTA CGCC                 TTATCCGGCCTATAG  63 63
A1D48_RS07875 1577772 .. 1577802 + -18.4  -3.05715   TGTCTCACTAAGCGT       CAGGGGATGCCTGT ACT GTAGGCATCCCCTG       TTACGTCAGGCGCTT 100 30
A1D48_RS07890 NONE
        elaB 1580737 .. 1580753 +  -6.5  -4.56597   TTTTTTAGGGCAGTA              CCCCGTA TAA TGTGGGG              TTTTTAACAGGGAGG  76 88
        menF NONE
        menD 1583804 .. 1583819 +  -4.7  -3.00923   CGCTGCAGCAACTTT              TGGCT CAGGTA AGCCA               TCTATGATGTTGCAC  49 3
        menH 1584557 .. 1584567 +  -5.4  -3.41125   TGGCGTGGTAGACAG                 TCTG GCT CAGA                 TTCTGCGTCTCTGAC  56 1
        menB NONE
        menC NONE
        menE 1587829 .. 1587843 +  -2.1  -3.21924   GCCGTTTTGTTTATC               CGTTG ATGTG TAACG               TGTTATGAACAATCA  44 75
        pmrD NONE
        pmrG 1596633 .. 1596653 +  -8.9  -2.64616   TTTTAACGCGGATAT            CGTCGCGGA AGG TCCACGGCG            TAATATCGCTCAGAA  59 273
A1D48_RS07980 1597653 .. 1597670 +  -9.1  -4.30576   GCTGACGGCCCTTAT             GTTGGCG TAAA CGCCAGC              TTTTGATGCTAACGG  85 2
A1D48_RS07985 1599024 .. 1599056 +  -8.5  -2.63752   GAGAACGACATCGTG     AGCCGGATAA-GGC CGCTAT GCCATTATCCGGCA      ATATTATCTGCTTTT  63 62
A1D48_RS07990 NONE
        rhmD 1601275 .. 1601286 +  -4.4   -3.1978   ACGGCAACGCCCTCA                TCCT GTTG AGGA                 TATTGCTATGAGCAT  50 62
A1D48_RS08000 1602566 .. 1602576 +  -2.4  -2.86582   CCGGTGGCGCAATCC                 GGCG CTG CGCA                 TCATTAATCTTATCT  41 8
A1D48_RS08005 NONE
A1D48_RS08010 1603598 .. 1603632 +  -5.9  -3.65696   TTGACGGCATAGAAC    TTTTA-G-TGGGAAGGC CTG GCCTTCCCATCCTCAAA    TTGGTTTATATGGCT  59 29
        glpT NONE
        glpQ 1611948 .. 1612000 +    -9  -3.54543   AAGGTTTGCCATAGT CGAAGTGACGCGCCGGATGAGG GCATAAACG CCTCATCCGGCCTGGCGCAACG TTTGCCAGCATAAGT  73 40
A1D48_RS08055 1614305 .. 1614330 + -16.3  -2.87931   GATTTCGATATCGCC         TTTTGCCCTGC AGCA GCAGGGCAAAA          TCTCTCCCGGCTGGA 100 51
A1D48_RS08085 NONE
A1D48_RS08090 1622821 .. 1622842 +  -5.7  -2.52464   CTAACCCCGACGGGG           CGAGGCCCA GGGA TGGGCCGAG            TAACTTGCCGCCAAC  49 140
A1D48_RS08100 1625769 .. 1625786 + -14.1  -5.29846   GTTATTGCTGTGCGA             GGGCCGG ATAT CCGGCCC              TTTTTCTTTGCCGTT 100 42
        rcsC 1629010 .. 1629048 +  -7.5  -5.00616   ATACTTCGCTCTCTT  TTGGCGACAGGCGCTTAT CGCC GTAACCGCCTG-CGCTGA   TTTTTTCCAGCAGAC  91 319
A1D48_RS08125 1634042 .. 1634055 +  -9.5  -5.18357   AAAGATGTTGCTAAA               GGGCC TGCG GGCCC                TTTTTTCATGCCTTA 100 47
        apbE NONE
         ada NONE
        alkB NONE
A1D48_RS08145 1638854 .. 1638892 +  -8.8  -3.32844   CTGCGTGAGCCGGCG   TGTTCAGATGCCCGGTAA GTG TGACCGGGCAGCGTAACA   TTATCGCGTGACGGC  69 178
        napF NONE
        napD NONE
        napA NONE
        napG NONE
        napH NONE
        napB NONE
        napC NONE
        ccmA NONE
        ccmB 1647050 .. 1647076 +  -2.9  -4.39386   CGCTGCGCCTCAGCG        TG-CAGTAGCGC CCCG GCGCGACGGACA         TTTTACTGGTTTCAG  60 18
A1D48_RS08205 1647840 .. 1647852 +  -6.2  -2.50493   ACTGAAAAGGGGGCA                CCGG TGAGT CCGG                CATTTTCATCGTGGA  53 19
        ccmD NONE
        ccmE NONE
A1D48_RS08220 NONE
        dsbE NONE
A1D48_RS08230 1652060 .. 1652093 + -16.7  -3.75105   GAGAAATAATGCCCT     GAC-GGCCCGGTGGCG AGG CGCCATCGGGCCTGGC     TTGTTACTGCATTCC 100 32
A1D48_RS08250 1654514 .. 1654531 +  -8.4  -4.57341   GTAGGCATAAAAAAA             CCAGCC CTGAGA GGCTGG              TTTTTAAGGGGAATT  87 413
        yejK NONE
A1D48_RS08280 1658623 .. 1658638 + -11.8  -5.10208   AAACGCATAAAAAAA              CCCCGC CGGG GCGGGG               TTTTTCTTCAACTTC 100 96
        rsuA NONE
A1D48_RS08300 NONE
A1D48_RS08310 1664043 .. 1664062 +  -3.4  -3.71924   GCGCCTGAAAGCGTA            GGCTGGTG GACG CGCAGGCC             TTCTTCGATAATTTG  51 438
A1D48_RS08365 1675529 .. 1675547 +  -4.6  -3.42257   TCGATATCATGAATT             TGATAGTT TAT ATCTATCA             TTGATGTATTTACCG  52 323
A1D48_RS08370 NONE
A1D48_RS08375 1676596 .. 1676612 +  -2.1  -3.19602   CGAACCGGCAATGAT              CCAGCCG ACG CGAATGG              TATTGGTATACAGCG  43 213
A1D48_RS08385 NONE
        fruK NONE
        fruA 1681815 .. 1681832 + -11.3   -5.4833   AAACACGCTAAAAAA             GGCAGAG CGCG CTCTGCC              TTTTTTATTGCCTGA 100 44
A1D48_RS08410 1684852 .. 1684865 +  -3.7  -4.80882   AGAGGAGGGCTGCCC               GGGCG GCAT CGCCA                TTTTTAGTATCCGCT  71 47
        lysP 1686565 .. 1686582 + -11.3  -6.07374   ACCTGACCCTTCTAA             CCCTCTC ATTC GAGAGGG              TTTTTTGTTTTTTCT 100 101
        cirA 1688831 .. 1688865 + -16.4   -2.5294   CCGTTTCTGACAGAG     ACTGGCGACAGCCGCG TTT TGCCGCTGTCGCCAGA     ATGTTATAACCGATG 100 31
A1D48_RS08440 NONE
A1D48_RS08445 1693311 .. 1693324 +  -8.1  -2.60392   GAATGGCGTCCTGCG               GCTGG CTGG CCAGC                ATTAATTCGCAGCTA  56 247
        folE NONE
A1D48_RS08465 1696134 .. 1696146 +  -3.4  -3.90318   CGCTGTAACCGTTTC                CATC CCTGT GATG                TTTCTCACGTAGTCC  55 69
        galS 1697291 .. 1697308 +  -6.3  -4.21989   GTAACCGTTTTCAAT             CTGTGAG TAAA TTCACAG              TTTATTAACATTGTG  70 54
        mglB 1698843 .. 1698864 +  -3.7  -2.70932   ATAACGTATTTCTTT           TG-CCATCCG GCG CGGATAGTCA           TAATTAAAAAGGCCG  45 109
        mglA NONE
        mglC 1701472 .. 1701500 + -10.2  -3.16683   TTTGCTTATCAGATA       ACCCGGCGCAGCG AAAC TGC-GCGCCGGGC        TTCATACCGTGAGCT  74 58
A1D48_RS08530 1709979 .. 1709991 +  -3.3  -2.89881   CGTCGTAAACGAATA                AGGAG AAT CTCCA                TGTCTGAAATAAATC  44 25
        gtdA 1711011 .. 1711021 +  -2.4  -3.81146   GCCCTGGGGCTGTTC                 CGCG AAG CACG                 TTATTAATTAGGGAG  51 8
A1D48_RS08540 NONE
        maiA NONE
A1D48_RS08550 1713672 .. 1713692 + -11.9  -5.58454   TTTGCTCATCGCAGA            GAGGCGTTA TGA TAGCGCCTC            TTTTTTTGCTGTGGA 100 91
        dusC 1714914 .. 1714931 +  -6.3  -2.50575   GGTATTGCAGCAAAA             TCGTTCA TTTA TGAACGG              GTTAGTGGGACTTTT  53 286
        mdtQ 1716543 .. 1716558 +  -3.2  -2.71011   GGCGGCGGTTATCAT              TCCTGA TTTT TCCGGA               TGATTCAGACAGGGT  43 20
A1D48_RS08570 1717384 .. 1717398 +  -4.9  -3.32963   CAAATAAACGCCGGG               TGCCG GATGG CGGCG               TTATGCCATCCGGAT  54 34
A1D48_RS08580 1718799 .. 1718819 +    -9  -2.79302   GACGATTCTTCTGTA           GCGGCAACG CTGG CGT-GCCGC            TATGATGCCACTGCT  66 85
A1D48_RS08590 1720014 .. 1720032 +  -3.7  -3.88787   TTTGCCGATAAAAAC             GCGTCAG CGTTT CCGGCGC             TTTATACAGATGTCC  56 187
        bglX 1724219 .. 1724237 +  -9.5  -2.88663   AGCCTGCCGTCAACA             GGGCGCG ATAGC TGCGCCC             TGTCTGGCAATGACT  70 40
A1D48_RS08605 NONE
A1D48_RS08610 NONE
A1D48_RS08615 NONE
A1D48_RS08620 1728342 .. 1728352 +  -6.8  -4.37092   GTTGCTGCTGCTGCG                 CCAG CGT CTGG                 TTTTCTCCGCACCAT  74 238
A1D48_RS08635 NONE
        yehT NONE
A1D48_RS08645 1732633 .. 1732650 +  -2.7  -3.34102   GCTGTCATGTTATTT             TGCTTTC CCTG GAGAGTA              TCGTTTTTCTGATCG  47 512
        apbC 1736942 .. 1736977 + -17.2   -3.1478   CCAAAGAGAATATGA    CATTCACTGCATTAAT ATAT ATTGATGCAGTGAATG     TATTAATAAAATAAT 100 56
A1D48_RS08670 1737489 .. 1737518 + -18.1  -5.82036   TTATTAATTCCGCAG       GCCCATATCATTG ATAT CAATGATATGGGC        TTTTTTATTTGTTGT 100 44
        yehD 1738289 .. 1738308 + -12.8  -5.24129   GACTAATTTATTCAA            CCGGCGGC GTTC GTCGCCGG             TTTTTTATAAGCAAG 100 35
A1D48_RS08680 1739031 .. 1739062 +  -2.3  -4.70772   TAAACAGGAGTTCAT      CATGCCAAG-GATG ACGCC CATCGCTTCGCTTG      TTTTATTGACTCTGT  64 38
A1D48_RS08685 NONE
A1D48_RS08690 1742780 .. 1742800 +  -8.2  -5.64274   ACATGGGGCTGTATT            TCCCCCTC TGGAT GAGGGGGC            TTTTTTTATCGATGA 100 261
        thiM NONE
        thiD 1745099 .. 1745111 +  -4.8  -2.66964   TCCGGTACATCATTT                CCAC GCGTG GTGG                TAGTATACTGCCTAC  48 10
A1D48_RS08710 1746339 .. 1746351 +  -7.7  -2.84098   ACATCGTCGACGGTT                TCCAG CCA CTGGA                TCATTGGTTCGCCAC  55 468
        fbaB 1750879 .. 1750895 +    -5  -3.45031   GAATAAGATAGGAGA              CGCCGC CCAAC GCGGCC              TTGAGTTTTTCCGGC  53 494
A1D48_RS08740 NONE
A1D48_RS08745 1752852 .. 1752864 +  -7.7  -3.72742   TATCTCCACGAGCTG                GCAGT TAA ACTGC                TTGTGTTCATAATGA  71 77
A1D48_RS08760 NONE
A1D48_RS08765 1756958 .. 1756973 +  -6.2  -4.77165   ATGGAATCCATTGAA              TCTACT TATT AGTAGA               TTTTATTATAAAAAA  80 287
A1D48_RS08770 1757609 .. 1757623 +  -2.9  -5.28561   GAAATATTAATTGGA               TATGT CGTGA ACATA               TTTTTGTTATATGTT  76 84
A1D48_RS08775 1758864 .. 1758880 +  -4.4  -3.60792   TCATTTTTATGGGAG              TAGGGG GGTCA CCCTTA              TTTAAAGATTACAAA  55 345
A1D48_RS08790 1761099 .. 1761111 +  -4.8   -4.1891   AAAATTGTACCGTTG                GAGC ATACA GCTC                TTTATCTTCGGGAGG  65 268
A1D48_RS08795 1762686 .. 1762698 +  -4.1  -3.53768   TTTTGTTTATTATTC                TGGTG TTC CATCA                TCTATTTTATATGTC  52 297
A1D48_RS24505 NONE
A1D48_RS24510 NONE
A1D48_RS08805 1764532 .. 1764556 +    -3  -2.78762   TATATGATGAGGAAA          TAAATGCGAT TTGTT ATTGTATTTA          TAATGTTAATAGTAT  41 227
A1D48_RS08810 1765243 .. 1765260 +  -6.9  -4.01137   GGTCTATTTGCAGAA             GCACTGC GGAT GCTGTGC              TTTATGAATTGTCTA  70 299
A1D48_RS08815 NONE
A1D48_RS08820 NONE
A1D48_RS08825 1766802 .. 1766812 +    -4   -3.5125   ACGCTTATTTAGCAA                 TCAT ATC ATGA                 GTTTTTAATTGAAAA  52 47
A1D48_RS08830 1767903 .. 1767916 +  -3.1  -4.11484   CTTCCCGAAGCGCCA               CGATG GTTT TATCG                TTTTCCAGCGTTACC  58 302
        ibsA 1784517 .. 1784530 +  -2.3  -3.01791   CCGCCTGGCCGGAAA               GGGCG ATTT TGCTC                TCTTCCGCGCAGCGT  42 420
        alkA 1786848 .. 1786861 +  -3.7  -4.08767   AGAATCACCTGGCAG               CCGCG TTGC CGCAG                TTTTCGCAGAGTCGC  60 312
A1D48_RS08915 1790531 .. 1790556 +  -2.6  -3.14132   GTGATAACCTGGTTA         GCCCTTGA TGTGCTTGAT TTAAGGGC          TTGATGCGCGAAAGG  45 65
A1D48_RS08920 1791169 .. 1791186 +  -2.6  -2.53263   TAAAGACTGAGCCAT             TCGGCG CAATAC TGCCGG              TCCATTGAGGGTAGC  40 31
        asmA 1793366 .. 1793378 +  -6.2  -3.83026   CACCAAATCCTCCAG                CGGC ATATG GCCG                TTTGCTGTCCAGGAA  63 333
A1D48_RS08940 NONE
         wzb NONE
         wzc NONE
        wcaA NONE
        wcaB NONE
        wcaC NONE
        wcaD NONE
        wcaE NONE
        wcaF 1804292 .. 1804309 +  -4.1  -3.54424   GCGCGTTCAGAAAGT             TACTCCC TAAC GGGACTA              TTTGAGGAAATGAAA  52 16
         gmd NONE
A1D48_RS08990 NONE
A1D48_RS08995 NONE
        wcaI NONE
        cpsB 1809534 .. 1809558 +  -3.5  -3.30124   GCGGTTCGAGGATCG          TTACGGGCG GGTCTGA CGCCTGCAA          TTATGCCCGGTAAGC  48 10
        cpsG NONE
        wcaJ 1812541 .. 1812553 +  -4.7  -2.57881   GTGCTCAATCTGGCT                GCGCC AAT GACGC                CTTGTGAACAGGTTC  46 88
A1D48_RS09020 NONE
        wcaK NONE
        wcaL NONE
        wcaM 1818002 .. 1818012 +  -2.6  -3.14211   GGTAAGTACCGCTAT                 TTTT ACG AAAA                 TTCCTGGGAAAAAGT  45 36
        galF 1819105 .. 1819156 + -10.1  -4.75518   TGATAAACATAATAA CGGCAGTGAACATTCGAAGCGGC AAGTTG GCTGAAACGAGTGTTGACTGCCG TTTTAGTTTTGTATA  91 68
        rfbB NONE
        rfbD 1821434 .. 1821447 +  -8.1  -4.55287   TCTGATAAATTTAAA               TGCCC ATCA GGGCA                TTTTCTATGAATGAG  82 36
        rfbA NONE
        rfbC 1822925 .. 1822947 +   -10  -3.73709   ATAGATATTGTTCAA           CACCTATAAG CGT TTTATAGGTG           TTATTAAAATTTTCT  80 66
A1D48_RS09065 1824909 .. 1824921 +  -3.5  -3.51235   CAAGATAAATATATG                TAATA AAG TATTA                TCTTATTCCTTATCG  50 165
A1D48_RS09070 NONE
A1D48_RS09075 NONE
A1D48_RS09080 NONE
A1D48_RS09085 NONE
        cpsG NONE
A1D48_RS09095 1832641 .. 1832664 +  -9.6  -2.72511   ACTATTCACCTTTAA          CCTGCCATGA CCGT TTGTGGCAGG           GTTTCCACACCTGAC  69 139
        gndA 1834116 .. 1834134 + -11.7  -6.06529   CTGCAAAATGTTTAA             GCCCGGT TTAAT ACCGGGC             TTTTTTTTATCTCTA 100 44
A1D48_RS09110 1835508 .. 1835527 +   -10  -3.10512   TGATTAATAAGGCAA            TCGGGGCT GATG AGTCCCGA             TGATTTATTGACCAT  73 34
        wzzB 1836680 .. 1836694 + -12.8  -5.48303   TTTCTCATTAAAAAA               CCGGGC ATT GCCCGG               TTTTTTTACGCTTAT 100 80
A1D48_RS09165 NONE
A1D48_RS09170 1846087 .. 1846114 +  -9.2  -5.63103   TGCAAAAAATGACAC        TAACCGACGTTT TAAT ACGCGTCGGTTA         TTTTTTTGCTTCAAA 100 127
        yoeI NONE
        plaP 1847657 .. 1847675 +   -16  -5.37043   TCGGCAATAGTAAAA             CCGGAGGC AGT GCCTCCGG             TTTTTTATCTGCCAT 100 53
        phsA NONE
        phsB NONE
A1D48_RS09215 1856180 .. 1856215 +   -12  -2.99251   CCATAAAATAAAGTC    AGCAAGAAAATGTGCC TTGT GTCACATTTTCTTGCA     ATTTATCCATGTTTG  81 47
        dacD 1857502 .. 1857538 +  -2.2  -3.31144   GGTGTCAAAAGGGCG    GGATTGCGAGGTTGCT CACAA AATGATCACGCAGTCC    TTGTGACCGTAAAAG  45 73
        sbmC NONE
A1D48_RS09230 1859355 .. 1859368 +  -2.3  -3.53012   GGCAACGATTTTATC               CCCGA ACCT TCAGG                TTTCCACAGGCGGCG  47 131
A1D48_RS09235 1859837 .. 1859871 + -10.7  -3.53091   CCGAATAATGCGCTA     CGGCAGTGGGAGCGT ATATC AGGCTCTCACTGCAG     TTTGACCCCGCCAGT  81 33
        pduF 1878038 .. 1878057 + -12.2  -4.47259   CGAACTGATCAAAAC            GTCTCCCA GCAA TGGGAGAC             TTTTGATATTGTCAT 100 113
        pocR 1879464 .. 1879477 +  -8.1  -2.82516   GGGTGAAAATCCCCC               GCAGC CCCC GCTGC                TGTGATGCTGACGAC  60 411
A1D48_RS09355 1881037 .. 1881047 +  -2.4  -3.23715   GCACTGGCTGGCGGC                 GGCG AGG CGCG                 TATTATGACGATTCT  44 7
A1D48_RS09360 NONE
A1D48_RS09365 NONE
A1D48_RS09370 NONE
A1D48_RS09375 NONE
A1D48_RS09380 NONE
A1D48_RS09385 NONE
        cbiG NONE
A1D48_RS09395 NONE
A1D48_RS09400 NONE
A1D48_RS09405 NONE
A1D48_RS09410 NONE
        cbiM NONE
A1D48_RS09420 NONE
A1D48_RS09425 NONE
A1D48_RS09430 NONE
A1D48_RS09435 NONE
        cobU NONE
        cobS 1895064 .. 1895081 +  -4.8  -2.76696   AACTGATCTTTCTGC             TGGCTC TATTAT GAGCCG              ATTATTACGGACGAG  49 12
        cobT NONE
        ldtA 1897308 .. 1897326 + -14.6  -4.81551   AAGCTATAAATCTTT             TCTCCGGC ATC GCCGGAGA             TTTTTCATATGCGTC 100 152
A1D48_RS09465 NONE
A1D48_RS09470 NONE
        arsD NONE
        arsA NONE
        arsB 1902368 .. 1902407 +  -8.6  -3.05384   CGGTTAATGGCATCG  GCGGGGGCTTCAT-TTTCT CAA AGAACCGTGAGGCCCCCGA  TTAAGTCCCCAAAAA  66 349
A1D48_RS09505 1904325 .. 1904338 +  -2.3  -3.36273   ACAGGCTTTGACAAG               CCAGG GGCA CCTCG                TTAATATTCGCCCCG  45 127
A1D48_RS09510 1904504 .. 1904531 +   -12  -5.05782   AATAACTTATCTTTA        CCCGGTTGACCT GAGA AGGTTTACCGGG         TTTTTTGACATCCAT 100 90
A1D48_RS09515 NONE
A1D48_RS09520 NONE
A1D48_RS09530 1907370 .. 1907407 + -11.9  -3.78934   AAAGCGGCTGAATGA   AGCCTTAGCGGGAGGCG ATTT TGCATCCCGCCAAGGCC    TTATTGTGCCGCGAG  93 101
A1D48_RS09585 1916875 .. 1916890 +  -2.6   -3.7108   TGTACTTTAGCTGTG              CGAT-TC ATA GACATCG              TTTCACTGTGCCGCT  50 31
A1D48_RS09590 1917982 .. 1918010 +  -7.6  -3.16683   CTATTGATGAAGCAA        TCTTCCTTATAT ATTTA AAATAAGGAAGA        TTGATAGGGTGCACT  62 41
A1D48_RS09615 NONE
A1D48_RS09620 1923149 .. 1923162 +  -3.8  -4.51743   CCTTATGAATATAGG               CAGC CCGCAC GCTG                TTTCTTTCCTGATGG  66 253
A1D48_RS09645 1925620 .. 1925632 +  -2.7  -2.87527   AAAATCAATCACTGA                CAAAG CGT TTTTG                ATTTCGTCATACATA  42 51
A1D48_RS09650 1926208 .. 1926221 +  -3.9  -3.82117   TTCATCTCCCTTCAT               GTTTT TCAA AAAAC                TCTTTTATGAATGCC  55 421
A1D48_RS09660 1927422 .. 1927442 +  -2.6  -3.55622   GCGTAAGAGTTTGGG            CTGTAAAT GATAA ATTTTCAG            TTTAAGAAAATTACA  48 16
A1D48_RS24515 NONE
A1D48_RS09665 1928303 .. 1928313 +  -3.2  -3.96327   GCGTATCGATCTTAA                 TGAG TTG CTCG                 TTTCTCATCCCAGCT  55 274
A1D48_RS09680 1930948 .. 1930984 + -16.1  -3.53224   TGACAGTTTTTTGTC    TGTAAAACGCCTGATGA ACA TCATCGGGCGTTTTGTA    TTTCAGGGCCAGGTG 100 312
A1D48_RS09695 1933029 .. 1933059 +  -2.1  -5.35721   CGTATATTTATGTTT      CATTAATAAG-AGT ATTG GCTGTTTATTAATG       TTTTTATTATTGTAT  77 53
        ghrA 1938509 .. 1938524 + -11.8  -3.64703   GGATATTGACATCAA              CCCGGC GCGG GCCGGG               TTTCGCTAAAAAACG  89 32
A1D48_RS09740 NONE
A1D48_RS09745 1939905 .. 1939943 +  -2.6  -3.07622   AGATGAAGAATAATG  TGATGTAAATCACCCTT AACTGC AACGG-GTTTTACATCA   TTGCATAAAATGTGT  43 28
A1D48_RS09750 1940490 .. 1940510 +   -14  -4.07455   TCACAAAATAAAAAA            GCGTGGGG TTCTT CCCCACGC            TTTGTCGTATTCATC 100 30
        csgB 1944121 .. 1944135 +  -3.6  -4.11216   ATCAATCCGATGGGG               GTTTTA CCA TGAAAC               TTTTAAAAGTGGCAG  57 59
A1D48_RS09785 1944610 .. 1944625 + -10.4  -5.75342   GCGCTAATAAAAAAA              CAGGGC ATAA GCCCTG               TTTTTTTTCGGGAGG 100 51
        csgC 1944962 .. 1944972 +  -3.2  -4.77036   AACAATGGCCGCCTT                 CTGC ACA GTAG                 TTTTTGATGGTGGCG  69 15
A1D48_RS09795 1945418 .. 1945430 +  -3.3  -2.82015   GATGAATATTGAGTA                CCGTT AAC GGCGG                TGTCATAGATATAAA  43 19
A1D48_RS09800 NONE
A1D48_RS09805 1947486 .. 1947514 +  -4.6  -4.17048   GTGAACCCGCGCGCG       GAAAACTAC-CCG ATCG CGGCGTGGCTTTC        TTGTTTTACCGGCGG  64 37
        mdoG NONE
        mdoH 1953018 .. 1953036 +   -11  -4.91511   GAGTGAGGTGAAAAA             TACCGGCG TGA TGCCGGTA             TTTTTATAGTGAAAT 100 55
A1D48_RS09825 1953312 .. 1953324 +  -6.2  -2.52015   TCATCCCATTCGTCT                GCCG CAGTA CGGC                CTTCCTCGGTATCAA  53 48
A1D48_RS09850 1957313 .. 1957346 + -16.8  -3.53761   GGCTGAGTAATATTT     TGCCGGATAGCCGC GTAAAG GCCGCTATCCGGCA      TTTCGCCAGGCGTTA 100 31
        rimJ NONE
A1D48_RS09915 1966256 .. 1966269 +  -3.1  -2.62515   TGGATTCTTTGTTAG               CTCACC TGG GG-GAG               TAATGTGAGAACATT  42 9
A1D48_RS09920 1967428 .. 1967438 +  -3.2  -2.59881   ATACAGCCGGATACG                 GCAG AAG TTGC                 GTTATCCGGTCGATG  42 256
        murJ 1969275 .. 1969287 +  -9.1   -5.1101   TGCTGGTTGAGGTCG                CGCAG ATG CTGCG                TTTTTTCGGTAATCG 100 264
        flgB NONE
        flgC NONE
        flgD NONE
A1D48_RS09965 NONE
A1D48_RS09970 NONE
A1D48_RS09975 1975093 .. 1975124 + -11.4  -3.09004   GACGCAACTCTAAGG      GGCCGCCGGTGGGG GATA CGCCACCGGCTCCC       TGATTTTGAAGATGA  79 28
        flgH NONE
A1D48_RS09985 NONE
        flgJ NONE
        flgK NONE
        flgL 1980640 .. 1980668 + -14.6  -5.55664   TGGATATGTTTTGTC        TGCCCGCGCC ATCCACCCC GGCGCGGGCA        TTTTTTTAGTCGTCA 100 69
        rluC 1985693 .. 1985711 +  -2.2  -3.53012   CACTGTTTATTCTTG             CGATCCGG ATT TCGGCGCG             TTTAAGGACGAACAG  47 129
A1D48_RS10025 1986571 .. 1986597 +    -3  -3.14344   AGTCGCAAAGGGAAG         GTTTCAGGAC AGTAAAC GTCCTGAGAG         TTGCTCGCGAGAATA  45 108
A1D48_RS10030 1986940 .. 1986950 +  -2.4  -4.15543   TAACTACCAACACGT                 GCAG AAA CGGC                 TTTTAGCGGTATTTG  57 49
        yceD NONE
        rpmF 1988546 .. 1988557 +  -5.8  -2.62184   ATGCCTTTTGCATCA                CAGG CGTG CCTG                 TGGTGTAAAAGCCGA  50 55
        plsX 1989733 .. 1989766 +  -2.9  -3.57263   GCGCACAGATAATAT     CG-CTGTCTCCCCGGC GCC GCCAGCGTGCCAGACG     TTTACAGGTAACGGT  50 29
A1D48_RS10055 1990738 .. 1990748 +  -2.4  -2.92669   GGGTGGATTCACCTG                 GGGC TCC GCGC                 TGATTCGTTTCTAGT  41 1
        fabD NONE
        fabG 1992574 .. 1992587 +  -2.3  -4.25848   TACACTACGAAAACC               ATCGC GAAA GCGAG                TTTTGATAGGAAATT  57 145
        acpP 1992855 .. 1992881 + -13.1  -5.02287   GGCGTAAGTGAACAT        CTCCAGGCGGTC GTTC GACCGCCTG-AG         TTTTATCTTTTTGTC 100 34
        fabF 1994203 .. 1994219 +  -7.2  -5.24531   AGACATTAATAAAAA              GGTCCG CTTGT CGGGCC              TTTTTTATCAGGCAT  91 55
        pabC NONE
        yceG NONE
A1D48_RS10090 NONE
        holB NONE
A1D48_RS10100 1998573 .. 1998591 +  -8.2  -2.77899   CATCAATCCGTTAAA             CGAGTTTT TTT AAAGCTCG             TAATTAATAAGCAAA  60 27
        ptsG 2000326 .. 2000343 + -12.7  -5.52384   GTTGGGGAGAATTAA             GGCAGCC ATTC GGCTGCC              TTTTTTTAATGGCGC 100 52
        hinT NONE
A1D48_RS10120 NONE
        lpoB NONE
        thiK NONE
        nagZ NONE
A1D48_RS10140 2006736 .. 2006751 + -10.4  -5.67063   TCAGTGACCGGATAA              CCAGCC TTGC GGCTGG               TTTTTTTATGCTCAA 100 64
A1D48_RS10145 2008264 .. 2008295 + -13.8  -3.42583   TGCATTAATTTCTCT      GCGCCTCACCGGC TGCTCGC GCCGGTGAG-CGC      TTCTCCATCTCTTGC 100 33
A1D48_RS10150 2008997 .. 2009023 + -10.1  -5.93809   GTACTCTGCAAGTTA         GCCCCTCATTC GCTCA GGCTGAGGGGC         TTTTTTTTATCCGAA 100 48
A1D48_RS10160 2010233 .. 2010254 + -15.9  -5.28176   CAATAAAAAGAGAAA           GCCTCGCGA TGCA TCGCGAGGC            TTTTTTGTCGGTCAG 100 75
        lolC NONE
        lolD 2017054 .. 2017087 +  -4.5  -3.83675   CGGCGGAACTGAGCC     TGATGGGGGCGGAGT AATG GCGTCGCCTTTATCA      TTGTTAATTGGCTTG  58 9
        lolE NONE
        nagK NONE
        cobB 2020220 .. 2020239 +  -3.4  -4.11394   ACTCTTCATAAATGG            CGCTGGCG TCGC CGACATCG             TTTTGCCACTCGCCT  58 151
        pepT 2027144 .. 2027156 +  -3.3  -2.64218   GAAGCGCGGCCAGTA                GCGAA TGT TACGC                ATTGTGGTGAAGCGT  42 25
A1D48_RS10230 2028487 .. 2028515 +  -8.8  -2.71074   GTTGTGGATAGTTTG       CGTCA-GCCCGGC GGTC GCCGGGCATTGCG        ATGTTCTTATCCTTC  64 30
A1D48_RS10280 2038159 .. 2038177 + -11.7  -5.29445   TGTTAAAAACAAAAA             CGGGGAC TTAAC GTCCCCG             TTTTTATTATTAGCA 100 51
A1D48_RS10285 2039719 .. 2039733 +  -8.6  -3.69323   CAAGCTTATTATCAG               GCTCTT TAA AAGAGC               TTTAAATGATCATGA  72 41
A1D48_RS10340 2045075 .. 2045085 +  -5.4  -3.71378   TCTTAATGTGGTTGT                 GAGA TTT TCTC                 TTTAAATATCAAATG  59 259
        pagC NONE
A1D48_RS10355 2046781 .. 2046802 +  -3.7  -3.94812   ATAAAATGAAATTCA           CACC-CTATG GTT CAGAGCGGTG           TCTTTTTACATCAGG  57 359
A1D48_RS10360 2047171 .. 2047191 +  -9.7  -4.21319   AGGTTGAAGTGGAAA            TGCCTGATG AGC CTTCAGGCA            TTTCTTAAGGTTAGT  84 34
A1D48_RS10370 2048221 .. 2048246 +  -4.8  -4.32034   TGAATAAGCCAGTTT         TTTGTTTCAG CGGTGA CTGAAACATA          TTTTGCTCCTGGTGG  68 197
A1D48_RS10375 2048451 .. 2048467 +  -6.7  -3.44051   TATACACTAATGCAA              TTGATAA TCA TTATCAA              TTGTGATGGTGAAGA  62 3
A1D48_RS10380 2049151 .. 2049176 + -17.7  -3.12351   TCATAATCGCGTTAA         TGAAGGCCCGT TTAG ACGGGCCTTCA          TTGCCTGTAGCGAAA 100 35
A1D48_RS10390 2050926 .. 2050936 +  -2.4  -3.76586   GGGGAGGCGTAATGA                 CCGG ATC CGGG                 TATTTGTGTTTAAGA  50 428
A1D48_RS10405 2053913 .. 2053930 +  -2.7  -2.62111   ACCTGGACCTGTCGG             TGATGAA ATTG TTCTTCA              GTCATTTTTTGCGGC  40 23
A1D48_RS10410 2054869 .. 2054884 +  -5.4  -2.82516   CTTAATCGATCGCTG              GAGCGT CCCG ATGCTC               TATAATCCTGCCCCG  50 5
A1D48_RS10415 NONE
A1D48_RS10420 NONE
A1D48_RS10425 2057109 .. 2057130 + -15.9  -3.21276   GTCGCCGTTAACGCA           CCGGGAACC CATG GGTTCCCGG            TATTGTCGGCAGAGA 100 68
A1D48_RS10435 NONE
A1D48_RS10440 2058912 .. 2058922 +  -8.2  -2.76227   AAAAAGGCCACCAGC                 GCGG TGG CCGC                 TGAGTTTCTGTTGAA  60 51
        zinT 2059666 .. 2059685 + -12.2  -5.63504   ATTGCAATGTTAAAA            GCTCGCTA TGAA TAGCGAGC             TTTTTTTCTGCCGTT 100 46
        aadA 2060640 .. 2060650 +  -5.4  -2.61695   ATGATCTTATGCGGG                 CCAT CGA ATGG                 ATATTTCCACATGGC  50 123
A1D48_RS10455 NONE
A1D48_RS10460 2062219 .. 2062244 + -11.1  -3.93236   TGCATTATTAACGAA         CAGGGGAGGAG TAAC CCCCTCCCTTG          TTTATACCCTTCATA  86 47
A1D48_RS10475 NONE
        leuE 2064406 .. 2064427 + -13.7  -2.60725   GTCTTAACCCTCCCG           GACCCGTCG ACAA CGGCGGGTC            ATTGCTCTCCTTTCG  86 34
A1D48_RS10490 NONE
A1D48_RS10495 2065167 .. 2065195 + -13.9  -4.74706   TTTTTAAATCAGAAG        CCGCATCGCGC GTCGCCA GCGTGATGCGG        TTTTTGCGTATTGAA 100 74
A1D48_RS10500 2066138 .. 2066158 +  -5.5  -3.27298   TCAACCACTCGGTGT            TGATAAAGA TAA TCGTTATCA            TTAATGATTGCAACC  54 174
A1D48_RS10505 2066573 .. 2066597 + -11.6  -3.63694   AACTTTCAGAGATAA          TAAAGGCTAC GACAG GTAGCCTTTA          TTATTCAAAATGAAT  87 47
A1D48_RS10515 2067283 .. 2067301 +    -6  -2.57581   CAATCTGATAATGAG             TTTCATGC GGC GCAAGAAA             ATATGTTTCAGTTAA  53 73
A1D48_RS10520 2067679 .. 2067708 +  -5.7   -3.8646   GTATAGCAACGTTAG       CGGCTGGTG TCGGGCAATATC CGCCAGCCG        TTTGCCTTCTTGATG  63 89
A1D48_RS10535 2070217 .. 2070249 +   -12  -3.60296   ACGCCAAGTACCGTA     CCGACCAGCAGCCCG GCGA CGAGCTGC-GGTTGG      TTTCCCATCAGCGTA  81 96
A1D48_RS10545 2071026 .. 2071040 +  -4.2  -3.66654   ACGCTCAAACAGGAG               CGGATC GGC GATCAG               TTTCAGATTGGGGTG  55 166
A1D48_RS10575 2078129 .. 2078153 + -12.9  -2.69151   CCGGAAAAACCATGA          CAAAGCCTGCG TTA TGCGGGCTTTG          TGCTGTCTGAAACGC  84 54
A1D48_RS10580 2079634 .. 2079646 +  -5.5  -3.41798   CGGACATTACCGTAG                GGGCT AAG AGTCC                TGTATTGTTTTACCG  56 73
A1D48_RS10585 2080554 .. 2080600 +  -8.8   -2.7752   GACGCCGGATAAAAT GTGTAAGCGCCGCCATCCGGCA GGTTA TGCCTGATGGCG--GCTGACGC CTTTCAGATCCTATA  64 39
        msrB NONE
A1D48_RS10610 2084118 .. 2084135 +  -8.3  -4.90217   TATTCCCAGAACATT             GCGCCGG CCAG CCCGCGC              TTTTTAATCTGTTTC  91 215
A1D48_RS10630 2088670 .. 2088714 +  -3.6  -2.71731   TGACGCTGAGGGATA AAACTGTCTGGATT-CTGAGC AAAG GCGCGGTAATTCAGACAGTGA TACTTACCACATCAG  43 38
        selD NONE
A1D48_RS10640 2092018 .. 2092035 +  -9.8  -3.53012   CCCCGATGTCGCCAC             GCCGCC CGCGTT GGCGGC              TTTACCCGGCGCAAA  71 271
A1D48_RS10650 2093688 .. 2093709 +  -4.3  -3.03124   CGGAATATCCGCCGG           GGCG-AGGGG GTA CTCCAGCGCC           TCTTCCGGCGTACAC  47 54
A1D48_RS10670 2096571 .. 2096590 +  -2.8  -2.62616   CCTTCAGACGGGAGG            CGCATCAT GCGG GTGATTCG             TCCTGTCGAACATGC  40 10
        astA NONE
        astD NONE
        astB NONE
        astE 2101394 .. 2101424 +  -7.6  -2.90496   CTGCCCTGATAAATG       TCCCTGTAAGCTCA CGT TAGGATTACAGGGA       TGATTTGGGACACAG  59 32
A1D48_RS10700 2102228 .. 2102276 + -11.7   -5.0065   CCGCATAATTTAAGA CCGCCGGTCTTGTCGACAACA CAATCGT TGAGGTGGACAGGATCGGCGG TTTTCTTTATGACTG 100 45
        osmE 2104704 .. 2104719 +  -7.5  -5.64274   GAACATTCAAGGAAA              CCGGC CTGCGA GCCGG               TTTTTTTGTGCCTGC 100 57
        chbB 2105338 .. 2105356 + -11.8  -3.38603   TATTTCATACACTAA             CCGCAATA TTT TATTGCGG             TATTTAAGGGTATTT  85 70
        chbC NONE
        chbA NONE
        chbR 2108029 .. 2108050 +  -2.2  -4.15044   TCACGCTTGCCCCAA           TAGCGCGG GGAACG TCACGCTA            TTTCTTACGAGCGGG  55 69
A1D48_RS10745 NONE
        chbG 2110247 .. 2110268 + -15.9   -5.1361   TTTAGCTCCTGAGTT           TGCGGCGCA AGAA TGCGCCGCA            TTTTTTGCCGTTTAT 100 36
        cedA 2113153 .. 2113173 +  -9.7  -4.72272   AAGAAAAAAACAAAA            CGCCGGT ACTGGAG ACCGGCG            TTTTTAGTGACAGAC  91 39
A1D48_RS10780 2117261 .. 2117273 +  -6.3  -2.83903   ACAATGGCGTCAATA                TTACC AAA GGTAA                TGCCTTTTTCCGCGG  50 426
A1D48_RS10800 2120244 .. 2120266 + -17.8  -3.69395   AGATGTAATATTGCG           CCGGGTTACG TTA CGTAACCCGG           TTATTCCGTGGTGAC 100 33
A1D48_RS10810 NONE
A1D48_RS10815 2122662 .. 2122683 + -10.3  -2.88758   ACCATCGTCATGCCG           GACGAAAAT AGCG ATTTTCGTC            TGTGTCGAAGGTTGT  72 135
        thrS NONE
        infC 2125304 .. 2125329 + -14.1  -4.66987   CCTTCAAGTAACAAT         TCTGTGAAGCC TTCG GGCTTCACAGG          TTTTGTTCGCCTATG 100 43
        rpmI 2125583 .. 2125597 +  -2.9  -4.87291   CCGTACGCATAAGCC               GTTAA CGTTT TTAAC               TTTTTAATTAGAATA  68 29
        rplT 2125996 .. 2126018 +   -12  -4.99568   GCATAAGCCAGTGAA           AAGAGGGAGC CTG GCTCCCTCTC           TTTTATTTACTGTTC 100 35
A1D48_RS10840 2126201 .. 2126216 + -10.4  -5.76633   AAACAGCGCAAAAAA              GCCTCC TGAT GGAGGC               TTTTTTTGTATCTGA 100 50
        pheS NONE
        pheT NONE
        ihfA 2130099 .. 2130113 + -12.8  -5.64421   CCGTATAACTAAAAA               GGCCGC ATT GCGGCC               TTTTTTCTTTCAAGT 100 146
        btuC NONE
A1D48_RS10865 NONE
        btuD NONE
A1D48_RS10875 2133219 .. 2133234 + -10.4  -3.04144   ACTTTTATTAAAAAC              GGGCGT GTTC ACGCCC               TGTTAAAAGTACAAG  73 150
        ydiV 2134170 .. 2134193 +  -3.1   -4.2679   ACCGTCTACACTGAA          GACAGGAGGC CCTAT GAC-CCTGTC          TTTTACTGCCCGTTG  60 74
A1D48_RS10885 2135623 .. 2135663 +  -6.9  -3.91084   GTCAGTTGTTCAAGT TAGC-CTGATGCCAGCAG CATCGT CTGCTGGCGGGAGCGCTA  TTTGGTTAACAGTAG  68 23
        ppsA 2140764 .. 2140799 + -15.4  -3.86524   TGAAGAAGTAGTGTA    ATACCGGATGGCGGCG TTAA CGTCGCCATCCGGCAA     TTTATACCGCAGTGT 100 30
A1D48_RS10935 2147721 .. 2147731 +  -6.8  -3.14564   CGGCGAAACCTGTAC                 TGCG CGC CGCA                 TTAATCAAACGCTCC  54 508
A1D48_RS10985 NONE
        menI 2160554 .. 2160568 +  -5.6  -2.71261   CTGTGCTGTTCTTCG               CGCCTT ACT ACGGCG               ATTGTGTGACGTTGT  50 2
A1D48_RS10995 2161095 .. 2161125 + -12.7  -5.45802   CGGATGGGGCCGGAA       CCCTTAAGCCTGT ATTGA ACAGACTTAAGGG       TTTTTCTTTTCCGGG 100 256
        sufA NONE
        sufB NONE
        sufC NONE
        sufD 2166780 .. 2166790 +  -2.4  -2.65766   AATCGGCCAGCGACT                 GCCC GGA GGTC                 TGGTATGACATTTCC  39 7
A1D48_RS11025 NONE
        sufE 2168498 .. 2168522 +  -9.3  -3.60952   GTCGGACGGCGACGT          CGCTTTATCCA GAG TGGACAGAGCG          TATATTTTGTTGTTC  75 79
A1D48_RS11035 2169629 .. 2169647 + -14.6  -4.74285   CGACGGACAAAAAAA             TGGCGCAC GAT GTGCGCCA             TTTTATATTGTGCGT 100 54
        ttrS NONE
        ttrR 2184353 .. 2184368 +  -4.8  -4.99947   AAACTGCGTTATTTC              TTTGAT TTGC ATCAAA               TTTTGTTTAATTGAG  77 46
        fumD 2184960 .. 2184971 +  -4.4  -3.39216   CTGGATATGCATCAG                CACA TTGG TGTG                 ATTTTTACGTGAAGC  51 343
        spiC NONE
        spiA NONE
A1D48_RS11140 NONE
A1D48_RS11145 2194030 .. 2194046 +  -2.9  -2.79878   GCAAAAACCGGAGCG              TACACGT AGC ACGTGAG              GTTTGACTCGCTACG  41 109
        sseA NONE
        sseB NONE
A1D48_RS11160 NONE
A1D48_RS11165 NONE
        sseD NONE
A1D48_RS11175 NONE
A1D48_RS11180 2198582 .. 2198595 +  -3.9  -3.05384   AATAACAGAACGAAA               TATGA AAAT TCATA                TTCCGTCAGCGGCAA  47 40
        sseF NONE
A1D48_RS11190 2200058 .. 2200073 +  -3.2  -3.32516   CCGGAGTAATCGTTT              TCAGGT ATAT ACCGGA               TGTTCATTGCTTTCT  48 32
A1D48_RS11195 NONE
A1D48_RS11200 NONE
A1D48_RS11205 NONE
        ssaJ NONE
A1D48_RS11215 NONE
        ssaK NONE
        ssaL 2203838 .. 2203860 +  -3.4    -2.882   TGAAGTAAAGGTAAA           TCAGGTTTTA TTC TGATACCTGG           CTTTCAATATTTAGG  44 10
        ssaM NONE
        ssaV NONE
A1D48_RS11240 NONE
        ssaO NONE
        ssaP NONE
        ssaQ NONE
        ssaR NONE
        ssas NONE
        ssaT NONE
        ssaU 2212554 .. 2212568 +  -7.8  -3.21276   AAAATAGCCGCCATG               CGACGG CTA TCGTCG               TATTATCGCGCAGCG  64 482
A1D48_RS11295 2214815 .. 2214840 + -10.5  -2.70932   TAACGGAAAATAAGA         TT-CCCCCGCAT GAA ATGCGGGGGCGA         TGATTAGCGAGGAAC  71 38
A1D48_RS11310 2218967 .. 2218980 +  -9.5  -3.05844   CATAAAGCCTGCCAG               CCGGC CCGC GCCGG                TGTTGCGCTCCAGCG  67 460
        ynhF 2219984 .. 2220020 +  -7.4  -2.57211   TCTATTCTATCCCTC   TCTAA-AACGCAGAAGG CGTA CCTTCTGCGTACTCAGA    CTTATGCGGCGAGAT  57 70
A1D48_RS11340 2222250 .. 2222267 + -11.3   -5.0133   CTGTGAAAGGGGAAA             GCGACCT GTAA AGGTCGC              TTTTTTACCGCCATC 100 42
A1D48_RS11370 2225663 .. 2225675 +  -4.1   -2.5333   TACTCAACCTCATTA                TTCTC TAT GAGGA                ATCTGTTATGGTTCA  44 56
A1D48_RS11375 2226597 .. 2226653 +  -2.4  -3.22113   GCCAACTCGTTGACT TTCCGTT-CATGTTTTCGCCAGT GGTTTACACTTA ACAGGCGACCACATGTAACGGAG GTTTTATGAAGCGAT  44 43
        sodC 2227293 .. 2227309 +  -8.7  -2.95521   GATGATGATGTGCGA              GCGTGTC GCA GATACGC              TGTAGTTCCTGTAGC  62 138
        slyA 2230938 .. 2230972 +  -9.3  -2.92613   CGATTGAGGTGCAGG    GGCAT-ACGTGTGGCC ATGT GACCACACGTAAAGCC     TGGTTTAGCGTGGAG  67 34
        anmK 2232829 .. 2232842 +  -2.4  -3.33922   GGCTAACCCAATAAC               TCAG AGTTAA CTGA                ATTTTTCCCGGACCT  45 16
        mliC 2233261 .. 2233295 +  -6.4  -4.11183   GAAGCGTTGAGATTT    TCAGTATGGGGGCGC ACAATA GCGCCACCC-ACTGA     TTGTTTCTGATCAAC  68 31
        pdxH 2234001 .. 2234014 +  -8.1  -2.57982   GTTTTAAGCACTGGT               GCGGA TGAA TCCGC                CGTTTTATGCTATGT  59 56
        tyrS 2235386 .. 2235405 + -12.2  -4.53398   AGGCATTAAGTAACA            GGGAGTGA GAAA TCACTCCC             TTATTTTTGATGTTC 100 40
        pdxY 2236376 .. 2236391 +  -3.2  -3.90048   CTTCCGCTTTAAGCG              CTG-CCG CAA CGGTCGG              TCTTTTTGCGACACG  54 110
A1D48_RS11495 2248125 .. 2248137 +  -4.7  -4.60041   CCGCGGCCACTTTTT                CGCGC AGC GCACG                TTTTTCGCCATCGCT  71 120
A1D48_RS11525 2255007 .. 2255038 +  -9.4  -3.28785   GCACGCTGCGTTAAG      TAATGTCGCCGCCC TGCG GGGCGGTAACATGA       TTCGCTATTTTGCCG  74 23
        fumC 2256910 .. 2256929 +    -7  -5.44119   CGTCCACGGCGGGAC            GCTGCGCG GCGA CGCGAGGC             TTTTTTTCAACTGGC 100 355
A1D48_RS11555 2262420 .. 2262446 +  -8.7  -2.56596   TGTCTGTTTTTTGAA         CAGTGGCGGTG ATGAG CATCGCCACTA         TGACTTAATAAAGGC  63 139
A1D48_RS11565 2263695 .. 2263734 + -12.4  -3.61398   TGGCAAAGACCGTGG  TTTCCCCATCGTAATA CAGACGGA TATTACGATGGGGAGG   TTGTTAACCCACCAG  95 44
        pntA NONE
        pntB 2269835 .. 2269852 + -12.7  -4.87786   CTTTTAAACGTGCGG             CGGCCTC TTCG GAGGCCG              TTTTTATACACTTCA 100 42
A1D48_RS11595 2271356 .. 2271366 +  -8.2  -2.82208   CTTCTGCCTGAGCTG                 GCGC AAT GCGC                 TGTGCTAACTGATTT  60 48
        mdtJ NONE
        mdtI 2272121 .. 2272162 +  -9.4  -3.21099   ATGATCAAATTTGCC TGAGACGATCGCTGCCTG TCGGTT CAGGCAGCGATTCCCGCA  TTAATCCTGCGCCAG  72 23
A1D48_RS11625 2276154 .. 2276164 +  -2.4  -3.37612   CTGCTATTACTGGCT                 GCCC GAC GGGA                 TTAATTACGCTTAAA  45 11
A1D48_RS11635 NONE
        bioD 2278379 .. 2278407 + -13.2  -2.73441   CACAGGCAATCAGCA        GACCGGGGAGTA ACTGA TACTCGCCGGTC        ATTTCACAAATCATC  79 67
A1D48_RS11700 2292154 .. 2292174 +  -8.1  -4.21908   ATCCATCGCCAGTTT            GGCCGCGCG TGA CGCCAGGCC            TTTTCCCTGGTACTC  77 315
A1D48_RS11715 2293329 .. 2293361 +  -8.3  -4.67755   GTACGTAACATTGCC      GCGCGACCAGAACAT TTT GTGATCTGGCAGCGC      TTTTTACATCAATAT  89 33
        rspA NONE
A1D48_RS11725 2295709 .. 2295723 +  -4.2   -3.0644   TAATTGCGAGTAAGT               GGTACG CAT CTTACC               TCTTAGAGATTGCCT  47 47
A1D48_RS11730 2297124 .. 2297178 + -10.2  -4.99947   CAGACGAGTTAAATC GTG-TTGG-CGGTATGGCCGGAA-CGC TAAT GCGGTTTCGGCCATGCTGTCCGGTCAC TTTTGTTTAATTAGC  93 29
A1D48_RS11735 2298925 .. 2298941 +  -6.5  -2.64099   TGGCTTTGATAATCC              CGGTATG ACC CGTGCCG              CTTATCATGACCCGG  51 220
         dcp 2303215 .. 2303234 +  -5.1  -3.34398   TAGAACTGTATCACA            TGATATG AGAAGA CATATCA             TATTTAAAACGCAAC  54 315
A1D48_RS11765 2303502 .. 2303520 + -12.4  -5.88565   ATATTGCGCATACGA             TGCGGGCC ATA GGCTCGCA             TTTTTTTATTCTGAC 100 75
A1D48_RS11775 2305160 .. 2305177 + -10.5  -5.81412   CCATGCAAGCATTTA             CCGCTGG TGAA CCGGCGG              TTTTTTTTGCCTGCC 100 267
        eamA 2308318 .. 2308352 +  -2.3  -4.03234   TTCAGCGGCAGCATA    TACCGTGATTCGCCA TGCATAT TGGTGA-TC-CGGTA    TTTGTGTGGCGGCAC  54 419
A1D48_RS11815 2310053 .. 2310092 +  -8.1  -3.15841   CGTACCACTAAGGCG CATTGTCGTCTGCCGGAAA CCTG TTCCCGGCAGAC-A-AATG  TCTTAATGCGGTTGT  64 30
A1D48_RS11830 2313772 .. 2313790 +  -4.4  -2.66316   GCGTCTAATCGCCCT             GACGTCGC GTG GCGCCCTC             TGCTATACTCGCAGG  46 33
A1D48_RS11835 NONE
A1D48_RS11840 2315129 .. 2315144 +  -6.8  -3.55761   CAGCGGTAGAGCAGC              GCGTCG TTGC TGACGC               TTTCCCCGATAAATC  62 32
A1D48_RS11845 2316446 .. 2316459 +  -2.3  -3.12327   CCCACACCTGGCTTT               CGCGG CCTG TCGTG                TGTTGAGTCTGCCCA  42 179
        ompC 2318827 .. 2318843 + -10.1  -5.49234   TCTTTTATTATTTCA              GGACGCT TCT GGCGTCC              TTTTTTATTGACTAT 100 127
A1D48_RS11905 2327640 .. 2327679 +  -2.9  -3.60035   GTCTCGGTTTAGTTT  CC-CCGGTAGGCTC GGCGAAGGTAATA GAGACTACCGGCGG  TTGCTTCTCTTTATC  50 48
A1D48_RS11910 2328723 .. 2328736 +  -8.1  -4.07678   GTAGGTGATCAGGTT               CGTCG GCAG CGACG                TTTCCTGTTTTGGCC  77 294
A1D48_RS11940 2336036 .. 2336047 +  -2.2  -4.57569   GCTATATAACAATCG                CCGT ATCA ATGG                 TTTTTCAAAGGGTAA  61 187
A1D48_RS11945 2337422 .. 2337434 +  -3.4  -4.59773   TCAGGTTTTCAAAAG                CAAG CCTCA CTTG                TTTTTGAAAATCAGG  67 307
A1D48_RS11980 2341029 .. 2341046 +  -3.3  -3.25072   CACAGAATCACACAG             GCGGCAG TAGC TTGACGC              TTACGTTCTGCTGGG  46 143
A1D48_RS11985 2342393 .. 2342407 +  -2.7  -4.08216   TAGACAAGAGCAGTA               CAGGG TCGCC CCCGG               TTTTCAAACCAGTGA  56 326
A1D48_RS12010 2344689 .. 2344703 +  -2.9  -3.95836   CCGACCTGAAGATTG               TTACT TTATC AGTAA               TTCTGTTTTAAAGAT  54 61
A1D48_RS12015 2345867 .. 2345889 +  -2.6  -4.11484   TGGCGCGCAGCGGCC           CTCTGACACA AGA TGTGGTAGTG           TTTTCAGACATTGAA  56 85
A1D48_RS12025 NONE
        nhaC NONE
A1D48_RS12035 2351675 .. 2351691 + -10.8  -3.05384   GCGCTAGTAAAAAAA              CCGGCC ATCAA GGCCGG              TTGGGTCCGGAGCGC  76 97
A1D48_RS12070 2361097 .. 2361110 +  -6.7  -4.05714   AGGGGTTACGTTTCT               TTCGC GTAA GCGAA                TTTGTCCTTAAAACT  70 68
A1D48_RS12075 2361319 .. 2361340 + -13.1  -5.38054   TGAAATGACGTTAAA           CACCATTGC ATCT GCAATGGTG            TTTTTGTTTATAGGA 100 52
A1D48_RS12080 2363171 .. 2363196 + -11.1  -2.82317   CTTCCATTTAATACG         TACCCGGCGGT GAAT GCCGCCGGATA          TCACTTTCTTCTTTA  74 30
        adhP 2364507 .. 2364532 + -13.4  -3.89346   GACAGCAGATGAAAA         CAAGGCGCTA CGAGGA TAGCGCCTTG          TTTATCAGATCGCGA 100 70
        yddG 2370685 .. 2370701 +  -6.7  -2.80252   GAGATCTCGATCACA              CAAATTA AAA TAATTTG              TAATCTTATGAAACT  55 404
        ompD 2371933 .. 2371953 + -13.3  -5.13344   TAGTCTGAATACAAA            GCCAGTCCT TTC AGGGCTGGC            TTTTTCTCTTGATGT 100 49
A1D48_RS12115 2372777 .. 2372793 +  -9.3  -4.82901   GCCATCGTTTCTATC              GCGCCGG CCG CCGCCGC              TTTTTCTGCCGGCGC  93 369
A1D48_RS12125 2374790 .. 2374804 +  -7.1  -3.42405   AATAAGTTCTCAAAA               GAGCG CGTGA CGCTC               TGTCTCTTTTTTGTG  65 174
A1D48_RS12130 2376267 .. 2376280 +  -2.4  -3.53444   GCACCTGTAGGACGG               CCAT CCGGCA ATGG                TTTAACGCCAAATCG  47 49
A1D48_RS12135 NONE
        narH NONE
        narW NONE
        narI NONE
A1D48_RS12155 2384426 .. 2384437 +  -7.2  -3.73968   GCATCAGGCGGTATT                CGCC ATGC GGCG                 TTTGCTGAGCAATTT  65 465
A1D48_RS12170 2386165 .. 2386175 +  -2.4  -3.26568   ATTGCAGGTAGGATG                 CTCC GCC GGCG                 GTTTTATCCCTGTCA  44 129
        ansP 2387802 .. 2387825 + -14.6  -3.74747   ATAACATTCCCCTTC          CCCGGCA-GCC CCA GGCCTGCCGGG          TTTAATGCGCGTTGC 100 37
A1D48_RS12190 2391690 .. 2391708 + -14.6  -3.19642   ATAAATATCCGGCAA             TAGCGGGG AAT CCCCGCTA             TTGATAAGTCATAGT  95 37
A1D48_RS12205 NONE
A1D48_RS12210 2395232 .. 2395246 +  -4.2  -3.79113   TGTAACAGCATGATT               CGCCTA TTA TACGCG               TTATTGTCGCCCGAT  55 300
A1D48_RS12220 NONE
A1D48_RS12225 NONE
A1D48_RS12230 2402118 .. 2402130 +  -3.3  -5.27335   CAGAGGAAAAAACGC                GCGCA ATA TGCTC                TTTTTATTTGACACA  77 278
        yncL 2402402 .. 2402445 + -15.2  -4.15235   CCTTTGAGTACTTGC TGCGCATGTTGGCGGGGAGG TCCC CCTCTCCGCCGACACCCGCC TATTTTTTCACGATT 100 50
        sifB 2408777 .. 2408791 +  -4.3  -3.60627   CCAGAGTTGACCACA               CCATA AATAG TATGG               TTTACAATCCCCTGG  55 31
A1D48_RS12275 2409339 .. 2409353 +  -2.8  -4.65168   CTGAAGCGACAACGC               TGCC GGGCTGG GGCA               TTTTTAAAATGTGGT  67 91
A1D48_RS12290 2413590 .. 2413601 +  -5.8  -3.51232   CAAGAACTTGCTGCC                CGAC CTGG GTCG                 TTGGTTTGGGGACGG  57 492
A1D48_RS12310 2417099 .. 2417112 +  -6.7   -3.2964   GTGACATATTGCGGC               CAGTC GAGC GACTG                TTGTAGCCACGCTTT  56 440
A1D48_RS12320 NONE
A1D48_RS12325 NONE
A1D48_RS12330 NONE
        sgcQ 2421060 .. 2421070 +  -4.6  -3.57144   TCGCCAAAAGACACG                 CCGG GGA TCGG                 TTTCAGAGTAACCCG  55 108
A1D48_RS12340 NONE
A1D48_RS12345 NONE
A1D48_RS12350 NONE
     aac(6') 2423454 .. 2423474 + -15.5  -4.23674   AATCATACAGGAAAA            GGTCGGGTA TAG TACCCGACC            TTTATATTACTGGGG 100 45
A1D48_RS12385 2431614 .. 2431647 +  -2.3  -4.67982   TTCTTCAAGCGAAGC    CGCCGCCGC-GGACG CCTCTT CGACCAGCGACG-CG     TTTTGTTGCGTAACC  65 182
A1D48_RS12410 2435666 .. 2435687 +  -5.8  -3.02144   CAGATAAAGTGTCAT           GCCATGCC CTTCCC GGCATTGC            TATTCCACAGCCTAC  52 34
        sseJ 2438462 .. 2438486 +  -4.1  -4.52857   GTGGATTCCGGCACT          CTGCGCCAGGT TTT ACGTGCCGCCG          TTTTATCTACACCGT  66 333
A1D48_RS12430 2440302 .. 2440331 +  -4.3  -2.67143   TGGCATCGTCGATAG       CTGGATGAAATAG TAAG CTATGTCATCAGG        TAATATGCTGGCTAT  46 13
A1D48_RS12435 NONE
A1D48_RS12440 2441713 .. 2441732 +  -2.8  -2.90283   TGTTTTTTTAGCGAG            GCACAACGA TGA TCGCTG-GC            TGGTCTCTTTTCTTT  42 14
A1D48_RS12445 2442466 .. 2442481 +  -6.2  -3.55973   TTTTTATTTAGTGTT              GGTTAA GATT TTAACC               TTCATTATTGCGTTA  60 90
A1D48_RS12450 2444498 .. 2444514 +    -3   -4.4078   TGATTAATGCTTGCC              TAACGA TTGCT TCGTTG              TTTTAATTCCAGCGC  60 435
A1D48_RS12455 2445360 .. 2445393 +  -6.7  -4.61199   AGACCCGTCCTCCTT     CGCCTGCGTCA CGGGTCCTGGTT AGACGCAGGCG      TTTTCTGTATGGAAT  79 171
A1D48_RS12475 2451714 .. 2451733 + -13.6  -2.67316   GCTTAAATATTTTTG            CCTCCCGT TTCG ACGGGAGG             TGACTTCTTCGGTTC  86 35
        ldhA 2456687 .. 2456710 + -12.4  -4.13767   CTGTTCTAATCCTGT          CGCTCCCCTG CGCT CAGGGGAGCA           TTTTCGGATAACCCC 100 32
        hslJ 2457388 .. 2457405 +  -6.9   -2.8552   CGCAATTCGCTTCGC             CGGCGCT GGAC ATCGCCG              CTTTCATCCCTGGCG  56 212
A1D48_RS12515 NONE
        nifJ 2461347 .. 2461366 + -13.6  -3.50047   CTGGAAACAAAAAAA            GCCCGAAC ATCC GTTCGGGC             TTGTCAATTTATACG 100 61
        uspF 2462646 .. 2462656 +  -3.2  -2.55896   TCCGATATTTTTCGG                 GTCG TGG TGAC                 ATCTTAATTAATACG  40 444
        ttcA 2467933 .. 2467961 + -14.6  -2.66008   AGTGAAATAATCTGC        AGGCGTCTCAGC ACTCC GCTGAGACGCCA        TACTATCGATCATTT  89 31
A1D48_RS12590 2473869 .. 2473881 +  -4.8  -3.36175   TATTATGAAAATACA                GGCA AAAAG TGCC                TTATCGGTCACACTT  54 33
         fnr 2474876 .. 2474892 +  -2.2  -3.91352   CATTTATTGATCTGG              CAGAAG CGCTT CCTCTG              TTTCATTCACCATAT  53 92
        uspE 2475917 .. 2475952 +  -6.8  -2.55437   GATTAATCCCTCTTC    CGTCCTG-CCGGATGGC GCA GCCATCCGGCCAATACC    CTATTCCTGTTACTC  55 35
A1D48_RS12610 2477493 .. 2477527 + -14.5  -3.12668   ACAAAATAAAAGATA    GCC--GGTGCCCGATAA CGC TTATCGGGCACCGAGGC    TTCCCTGTCCGGATG  89 32
A1D48_RS12620 NONE
A1D48_RS12625 2479318 .. 2479330 +  -4.7  -3.76837   GAGAATGCCTGCGCC                CCTGC ATT GCCGG                TTATTCGGTTCTCTG  58 77
A1D48_RS12650 2485180 .. 2485226 +  -7.8  -2.80028   ATACTTTAACTATTA ATGGGAGTATGCTGGCCGGGCG GCT TGCGGGGCCTTCATGCTCCCAC ATTTACAATGTTGGT  60 273
A1D48_RS12655 2486662 .. 2486672 +  -3.2  -2.86177   TACCAGTCCAGTTTC                 GATG CGC CGTC                 TGTCGTCTGCACTAT  44 255
        bdcA 2488412 .. 2488438 + -10.9  -3.04248   CAGGCGAATATCACA         CGGTTGCCG TCTACGCTC CGGCAACCG         TGTTAGAAGCTGTTC  76 45
A1D48_RS12685 2491769 .. 2491785 +  -3.7  -4.50976   GACATTTTTACCGTA              GGGAAAA TAG TTTTCCG              TTTTGTGATCTAACG  66 212
A1D48_RS12715 2499476 .. 2499498 + -10.6  -2.54272   GATTAAAAATAGCCC           AACCTCCTGA ATT TCAGGAGGTC           ATCCTTTTAATTTTA  74 16
A1D48_RS12720 NONE
        dmsB NONE
A1D48_RS12730 2503770 .. 2503787 + -12.7  -3.56836   CAGGTTAACAAATTA             GTGCGGG GGAA CCCGCAC              TTTACGGAATGGTTT  93 33
        dmsD 2504543 .. 2504556 +  -2.4  -3.11988   AAATCTTCTCCGCAA               CACA AGAATA TGTG                ATTTGTTAGATCAGA  42 150
A1D48_RS12740 NONE
A1D48_RS12745 2505466 .. 2505487 + -11.5  -3.47349   GGTCAGAAGAAGAAA           CTGGCGCTG CAAG CCGCGCCAG            TTCTGAGTTTGGCAG  85 174
        mpaA 2508291 .. 2508303 +  -6.2  -3.58343   TGATCATATCGTAGC                GCCC CGTCA GGGC                TTTCAGACTACTGCG  57 248
A1D48_RS12765 2509689 .. 2509712 + -13.2  -5.70829   GCTCTTTTGTCACAA          GAAGGCCTCT ATCC GGAGGCCTTC           TTTTTTTCTACTCTT 100 84
        pspF NONE
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF 2522520 .. 2522542 +  -6.3  -3.14051   TAAGCGAAACAAATA           CCCTCAG TTCGATTCT CTGAGGG           TGTTCATGCGACTGC  57 38
A1D48_RS12850 NONE
A1D48_RS12855 NONE
        fabI 2526677 .. 2526693 +  -3.8  -3.49176   ATAGCGTTCTGATAT              TTGTTA TCACC TAACAA              TCTTTCATCCCTTTC  52 113
A1D48_RS12865 NONE
A1D48_RS12870 2529965 .. 2529991 + -14.5  -4.96427   GTTGAGCTCGCTTAA         CGGCCTTTGCT GAGAA GGCAAAGGCCG         TTTCTTTTCTTCTTC 100 45
        pdeR 2532225 .. 2532235 +  -2.4  -4.00465   ACAGCCTGTGCAGAC                 AGGC ATA GCCC                 TATTTTTCCCTTCTC  53 61
A1D48_RS12885 2532504 .. 2532531 +  -6.8  -2.94622   GATAGCGATTATTTG        TCCGGGATGGCC GTTA GCCCTTCCCGGC         TCTCTGACTGTCTGT  56 39
A1D48_RS12890 2533342 .. 2533363 +  -9.5  -2.72799   TAAAATATTTCCCGA           TGGTTTGCC CTAT GGCAAATCA            TCCTCTCTCTAAGAC  69 38
        osmB 2533894 .. 2533919 + -11.9   -4.4078   CAAAGTTGACTTTTA         CGCCACGGT AATTTACA ACCGTGGCG          TTTTCATTAGCCGCC  95 113
        ribA 2538801 .. 2538811 +  -8.2  -5.19212   TTTCCCGGCAATTAC                 CGCC AGC GGCG                 TTTTTTCCTGCTGGT 100 462
A1D48_RS12955 2543678 .. 2543690 +  -5.5  -2.72263   TCGACTAATGGCGCG                CGCGT TTC ACGTG                ATTTCGGGAACGTAT  47 201
A1D48_RS12970 2547004 .. 2547040 +  -4.3  -3.93026   ATGTCCAGAGCCGGA    CGCATCCGCTGCACAAA CTC TTTGAACAGATGGTGCG    TTTCGTTGAGATCTT  60 320
A1D48_RS12980 NONE
        cobO 2549657 .. 2549679 + -10.4  -3.53091   GCGAGGTCGAGCTCA           GTCCAGCCGC CGC GCGGCAGGCC           TTTCGGCAGCGGGAT  74 299
        trpL 2552167 .. 2552185 + -10.2  -5.75342   GCCAAACGATACCCG             GCCCGCCT GTT AAGCGGGC             TTTTTTTTGAACAAA 100 46
        trpE NONE
        trpD NONE
       trpCF NONE
        trpB NONE
        trpA 2558753 .. 2558775 + -12.7  -3.15579   CGCATAACGTGTTAA           GCCGTCAGC ATAAC GCTGGCGGC           TTAATGAGAGCTTGG  86 34
A1D48_RS13035 2559449 .. 2559470 + -12.3  -3.63744   CTTTTATCAAGCAAT           CTGCGAGTC TTCT GGCTCGCAG            TATTTTGCCCAGGAG  95 68
A1D48_RS13040 NONE
A1D48_RS13045 NONE
A1D48_RS13050 2561516 .. 2561534 +   -16  -5.14563   GTCATGTCCTTTTTT             GACCCCGC CTG GCGGGGTC             TTTTTTCGTCACAAC 100 64
A1D48_RS13060 NONE
A1D48_RS13065 2563727 .. 2563742 +    -6  -2.80016   GCAATGCGCCGTTAC              GCGGCG CATT CGACGC               TCGTTGATGATGGAA  53 44
A1D48_RS13070 2564323 .. 2564347 +  -7.1  -3.80535   TCCCGTGACTTATCA          TCGCCAGAC TGCGAAC GCCTGGCGA          TATTTTCTCCGCCTT  68 44
        yciA 2565249 .. 2565260 +  -7.2   -3.6422   TGCTGCTTGTTGGCC                GCGC CGGG GCGC                 TATTTTCAAACGGTG  65 408
A1D48_RS13085 2566184 .. 2566203 +   -15  -3.91897   AAAGGATGGCCTGTT            GGGCACCG CATA CGGTGCCC             TTTCTGGCTCACACA 100 41
         cls NONE
A1D48_RS13095 2568619 .. 2568631 +  -4.8  -3.39803   TGCGGCGTAATATCA                CCGT ACCCC ACGG                TTGTGACTGTCACTA  51 293
        adhE 2579507 .. 2579524 + -12.7  -6.09196   TTAGCATGACAATAA             CGGCCTC AATT GAGGCCG              TTTTTTTGTTTTACC 100 54
A1D48_RS13150 2581390 .. 2581406 + -13.7  -5.81412   CCTGGATGCTTAAAA              TCCCGCC GCT GGCGGGA              TTTTTTTTGCCTGAG 100 48
A1D48_RS13170 NONE
        purU 2586192 .. 2586221 +   -10  -3.06261   TCATTTGATATGATG       C-GCCCCGCTTCC CAAAA GGAAGCGGGCCAG       TATTAAGCATTACCC  73 136
A1D48_RS13180 NONE
A1D48_RS13185 2586514 .. 2586527 +  -5.3  -3.07816   CACCACCATTATTCA               CTACA GCGA TGTAG                TTAACTCGATGAGCA  51 33
A1D48_RS13190 NONE
A1D48_RS13195 NONE
A1D48_RS13200 NONE
A1D48_RS13205 2587618 .. 2587641 +  -3.8  -3.80437   TATGCCACGCCAAGC          TGATATTGCG CTTT CGCAAAATCC           TGTTTTGCTGCTTTT  56 492
        narX NONE
        narL 2600696 .. 2600707 +  -3.6  -4.56597   TGCGCCACTTCACTG                GCGG CAAG CTGC                 TTTTTGAGCGGCACG  69 474
A1D48_RS13265 2602265 .. 2602280 +  -5.4  -5.22768   AAAATCAGGCCAACA              CGCGAGT AAT AC-CGCG              TTTATTTTTTCTTAT  83 88
        chaA 2603989 .. 2604009 +  -7.5  -3.53012   ATCAATCGCTTTTAT            CTGGGTCAG GAA CTGCTCCAG            TTTCGCCAGCGGCAG  62 135
        lolB NONE
        ispE 2611155 .. 2611169 +   -10  -3.62522   GGCAAGCTGAGCTTC               GGTGAC AAC GTCACC               TTGTTCCAGACGTTG  78 160
A1D48_RS13320 2612252 .. 2612265 +  -9.5  -5.76633   AACCCGGATCTGAAA               CCCGC TGCG GCGGG                TTTTTTTGTCTGTAA 100 44
        dauA 2614108 .. 2614123 +  -3.2  -3.99324   TATGACGACGATTGT              CGTTAC GGCG GCAACG               TTTGTCATAGTGACG  55 90
A1D48_RS13335 2615231 .. 2615258 +  -9.8  -2.94099   AGGCGCAATAACCAG        TGATGTGCGGCA TTTT TGCCGCACGCCG         TGTATAATAGGCGAA  70 30
        ychF 2616497 .. 2616514 + -11.3  -5.01811   GAAAACCCCATAAAA             TCCACGC ACTT GCGTGGA              TTTTTCATTTCATAA 100 88
A1D48_RS13345 NONE
A1D48_RS13350 2618405 .. 2618417 +  -5.5  -3.53012   TCCCACCAGGCGTTA                TTGGC GCA GCCAG                TTTGGACACGGACAG  57 124
A1D48_RS13360 NONE
        hyaB NONE
        hyaC NONE
A1D48_RS13375 NONE
        hyaE NONE
A1D48_RS13385 2626056 .. 2626073 +  -6.3  -2.79809   GCTCTCAACAGGAAC             GTCACCGG TGT CCGGT-AC             TGATTAAGCTTTTTA  53 42
        appC NONE
A1D48_RS13395 NONE
        cbdX 2628916 .. 2628947 + -10.9  -5.36364   CAACAATAAAGAGGT      AAACCGGGGTCAG CGCCGT CTGACTCCGGTTA       TTTTTATCTTTTTAC 100 32
A1D48_RS13405 2630602 .. 2630619 +  -7.7   -5.4492   GTTATTGCGCTAAAA             TCCACGT CCCG GCGTGGA              TTTTTTATCTGTATA  95 49
A1D48_RS13410 2632515 .. 2632554 +  -2.2  -3.05522   AGTAACGCGTGTTTA TAGTA-G-GTTGACCCGG CGCTGA CCGGGTCAACGCTTACAC  GTTTTGCAGCGGTTA  42 36
        ycgR 2634204 .. 2634214 +  -8.2  -4.68593   GGATCAACCCCCCAT                 GCCG CCC CGGC                 TTTTTCACTGATGGG  90 505
        ldcA NONE
A1D48_RS13435 2637310 .. 2637330 +  -2.5  -3.28712   TGGACCGGTCGACGC            CTTAGCCTG AGT TAGGTTACG            TTGTCACAAACGGCA  46 71
A1D48_RS13450 2641810 .. 2641822 +  -4.8  -3.76492   AGTGGCGACCAATGC                GGGT GTATA ACCC                TTTCATGCCGTTCAG  55 272
        nhaB 2644096 .. 2644126 +  -2.5  -4.68994   AACGCTTTCGTAACG      TTTG-GCCGGGC AATACACC GCCCGGCTCCGA       TTTTTGCCTGATAAT  65 28
        dsbB 2644772 .. 2644787 + -10.4  -5.75342   GGTCGTTGATACACA              CGCTCC TTCG GGAGCG               TTTTTTTTGCCCGAA 100 32
A1D48_RS13470 2645604 .. 2645632 + -10.9  -3.39895   GAAGATGTAAAAAAA        CCGCCTGGCACAG GAG CTGCATCAGGCGG        TTGGTTAATAGCACA  80 414
        minC 2648500 .. 2648512 +  -4.9  -3.29973   ACAACGCTTTGACAG                TTCAA CCG TTGAA                TTGATCCCTTTTTAA  54 9
        minD NONE
        minE 2649649 .. 2649678 + -15.3  -5.57054   GGAAAATTCCTGGAT       TAAAAAAGGCAGA AGAA TCTGCCTTTTTTA        TTTTTTTACATTATT 100 52
A1D48_RS13545 2656763 .. 2656775 +  -2.6  -3.73647   CCTGGATACGTTCTA                CGGC TTTTT GCTG                TTGTTCATGACTGAG  50 162
        pabB NONE
A1D48_RS13560 2659016 .. 2659029 +  -2.3  -3.19026   TCATGTGAATAGTTA               AGCTG ATGC CAGCG                TTCCCTCTTACACTA  44 203
        sdaA 2660482 .. 2660510 + -13.9  -5.10968   CGCCGTTTCCCCTCC        CTTCGCCCATCTG CTA CGGATGGGCGAAA        TTTTTATCTCTTCCT 100 42
A1D48_RS13570 2662636 .. 2662652 +  -3.7  -2.71791   GCAAAACGCCTAACA              GATTGAT AGG ATCAAGC              GTTTCCGGCACCACT  43 457
        manX NONE
A1D48_RS13590 NONE
A1D48_RS13595 2666960 .. 2666977 + -14.1  -6.04953   GCTGTTGTACACTAC             CGGGGCC AAAC GGCCCCG              TTTTTTTATTTCTCT 100 42
A1D48_RS13600 2667511 .. 2667526 +  -6.2  -3.92324   TATTTCGAATCATAA              TATAGC TAAG GCTATA               TTTCCTATTGACCAA  66 76
        mntP 2668491 .. 2668501 +  -6.8  -3.62522   CAGCTAAGTCCGGCG                 CTGG CGG CCAG                 TTGTTCCCACACTTC  62 80
A1D48_RS13645 2673344 .. 2673366 +  -9.2  -5.78622   GATGTTATAAAAAAA           GCAGCTAC ATTTTTC GTAGCTGC           TTTTTTTTAACGTCA 100 184
A1D48_RS13655 2675743 .. 2675760 + -12.7   -4.3534   TCAGGCGTAAAAAAA             GCGCGTC ATTC GACGCGC              TTTTCATACTTGCCA 100 31
A1D48_RS13680 NONE
A1D48_RS13685 2684231 .. 2684256 + -12.5  -4.46926   CCACGTTAAACACCC         GGCTCCGGCGT ACTC GCGCCGGAGCG          TTTTATGCTACACTG 100 32
        rsmF NONE
A1D48_RS13695 2686106 .. 2686121 +  -8.2  -4.34486   CTGACTCAAAAAGAA              CCCGTC GCCA GGCGGG               TTATTTATTCTTCCT  79 37
A1D48_RS13700 2686405 .. 2686415 +  -2.4  -3.31905   TTTTTAACCCTGGTC                 GCTG ATA CCGC                 TATTGTATCCGCGCT  45 34
A1D48_RS13725 2689522 .. 2689534 +  -3.3  -3.53012   TTATATATAGAAAAT                GTGGT CAT GCCGC                TTTAACAAGCCAGGG  50 8
A1D48_RS13730 2690359 .. 2690378 +  -2.1  -2.83899   ACCTGTCTTCTAAAC            GTCTGTG CCATAC CACAGAG             ATTTAGTACAAAATT  41 40
A1D48_RS24545 2690649 .. 2690674 + -18.3  -4.08767   TTTGATTTTTTTTGA         GCCAGCCCCGT TTCG GCGGGGCTGGC          TTTTGCGGGAATACC 100 26
A1D48_RS13755 NONE
A1D48_RS13760 2693672 .. 2693697 + -13.3  -3.09327   TCTGCAGAAAAAGAT         TGCCGCCAGGA CATT TTCTGGCGGCG          TATTACCTCGCCTGA  86 103
A1D48_RS13765 2694560 .. 2694583 +  -4.6  -2.98823   TAGATAATTAATGTG          TATTAGCTCA AATG TGAGCTGACA           TATCTATGGCACAGC  49 85
A1D48_RS13780 NONE
A1D48_RS13785 2696077 .. 2696094 +  -2.6  -4.13767   GGAGTATACAGTATT             CAGCAG ATGTTC CTGCAG              TTTTGAAATGCGACC  56 2
A1D48_RS13805 2700252 .. 2700279 + -11.4  -5.45652   TCAGAGATAAAAAAA        CCGTAAGCCTTT TCGT GAAGGTTTACGG         TTTTTTATTAAAAAT 100 353
A1D48_RS13830 NONE
A1D48_RS13835 NONE
        exoX 2703775 .. 2703805 +  -9.7  -2.91239   AACACCACAATAACC      CGCGACGCTCACAA GCCG TTGCGGGCG-CGCG       TCTATGCGCTATGTA  70 28
        purT 2708839 .. 2708876 +  -6.4  -4.83615   CCGCGTGACGGTAAA  AG-GCTAATG-CGCCATC GCCT GATGGCGACGTTAGCGCA   TTTTTATCAGACCTG  80 19
A1D48_RS13890 2714446 .. 2714458 +  -3.4  -4.25104   GGATCAATGTTCACG                CAAC ACCAA GTTG                TTTTAGTCAACGGAG  60 115
A1D48_RS13895 2715968 .. 2715993 + -14.9  -4.49958   CAGGGTTTGTCAGCA         TAAAGCCTCTC TTAC GAGAGGCTTTA          TTTATTTGATGGGAT 100 71
        znuC NONE
        znuB 2721322 .. 2721354 +  -5.6  -2.73364   AGCATATCCAGCGCC     TG-CGCGGCAATTTC CGCT GAAATAGCCCCGTCA      TGCTTCACCTCGGCG  47 369
A1D48_RS13945 2724576 .. 2724593 +  -2.7  -3.67141   TTCCCCGCGCCAGAT             TGAGTCGG CTC TCG-CTCA             TTTGCATCGCGTTCT  51 53
A1D48_RS13970 NONE
A1D48_RS13975 NONE
A1D48_RS13980 2730358 .. 2730374 +  -3.6  -4.85782   TTTTCTCCCTGTATT              AGCGCA CAATA TGCGCC              TTTATTTTTCCCGGA  69 24
        cmoA NONE
        cmoB NONE
        argS 2735676 .. 2735704 + -14.6  -5.06414   TCGTTAACATCATCA        GGCCTGACTCCG GGTAA CGGACTCAGGCC        TTTTTATTGCCACAG 100 49
        mrdA 2737901 .. 2737916 +  -6.8  -2.56838   TGACGTTTGCAGCAG              TTCGCC TTCC GGCGAG               ATATGTTTCACTATC  51 214
A1D48_RS14095 NONE
        uspC 2754585 .. 2754619 +  -5.7  -3.53761   TAGATGTGTTGTTGG    TACCGTTAGCGGGCGA CTAG TCGCC-GCTCGCGATA     TTTCAGGCCAGCTTA  57 6
A1D48_RS14125 2759350 .. 2759370 +    -4  -4.58395   AGGCGGATACCCCTC            GCCTTTAC GCCCG GTAAACGC            TTTTTCAAAGATGAA  69 426
A1D48_RS14135 2760415 .. 2760434 + -12.2  -4.35747   TGCAGGGTCGCTATT            GCCAGCAT GAAG ATGCTGGC             TTTCCTTTATTTTTA  95 83
        ftnA 2761274 .. 2761289 +    -6  -4.63932   TGTGAAATCGTGCCC              GCTCGC CAAA GCGCGC               TTTTATTGCCGCCTC  75 205
        tyrP 2762897 .. 2762910 +  -3.8  -3.52177   TTACGAGCCATTAAT               GCAG GCAGCA CTGC                TTAAATTTTTTGCCG  52 105
A1D48_RS14205 NONE
A1D48_RS14210 2770807 .. 2770833 + -12.2  -3.63627   GCCAGTAGTAAAAAA         CCGGCTGTTAGC ATC GCTTTCAGCCGG         TTTCGCGTCTGGCGC  89 33
        fliD NONE
        fliS NONE
        fliT 2782166 .. 2782179 +  -3.8  -3.28712   TTCCATACTCCAGAG               GTCG GCTAAA CGAC                TTCTGGAGCACGGAA  50 67
        amyA 2783732 .. 2783745 +  -5.9  -5.24129   AAATCACGGCAGCGG               CGTCG GCAG CGGCG                TTTTTTCTAACGCGG  83 77
        yedE NONE
        yedF 2785760 .. 2785788 +  -9.5  -3.05597   TCAAAAATAAGCGCA        TACTCCCGCTGTA CGT TACGGCGGGAGAC        CTTTTACGGCATAAC  71 31
A1D48_RS14300 2786681 .. 2786692 +  -2.2   -4.1399   ATTTTTCCGCCTGAA                C-GCG CGC CGCCG                TTTGTCTGTCGCTAA  56 301
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
        fliK 2793506 .. 2793520 +  -2.8  -3.96148   GTAGCATGATTATCC               GCGT CTTTTCC ACGC               TTTGTCGTGGACAGG  54 49
        fliL NONE
        fliM NONE
        fliN NONE
        fliO 2795832 .. 2795855 +  -2.2  -2.56982   GAAGAGCTTACTCAA          GCGTTCCGGG AGAT CCTGATGCGC           CGTTTGTTATTCCTT  39 7
        fliP NONE
        fliQ NONE
        fliR NONE
        rcsA 2798754 .. 2798776 + -16.2  -4.14392   TGCCAGTACCACGCC           CGGTCGGCGG GGA CCGCCGTCCG           TTTTAACGGTTACCC 100 205
        yodD 2799347 .. 2799358 +  -2.2  -2.80816   GTTTGGTAGCAAAAG                TGTG ACAA CGCA                 TGTGCTGCCTGGAAG  40 209
A1D48_RS14390 2800703 .. 2800734 +  -2.8  -4.56597   GAAAATGGCTGGCGG      GCTTCCCGGTAGCGC TTT GC-CAGCCTGGACGC      TTTTTCAAACAGCGC  67 440
        yedA 2804429 .. 2804465 + -12.4  -3.02144   ATGAATCCCCTGGGT   GTCGATCTGCGCGCTGGC GCC GCC-GC-CGCAGATCCAC   TCTTCCAGGCGCTCC  76 41
A1D48_RS14435 2809322 .. 2809346 + -17.9  -3.78934   ACGCTTTATGTTATT          CAAGCCCGTGC TTA GCGCGGGCTTG          TTATTATAGGGCAAG 100 42
A1D48_RS14455 2812634 .. 2812645 +  -4.4  -3.34716   TGGGTGGCACTGGAG                CTGT CATT ACAG                 ATTTTTCAACGGTGA  52 251
A1D48_RS14460 2813476 .. 2813487 +    -3  -3.32343   ATGTTAACACTGGTG                GATA ATGG TATC                 TTATGAAACTGTCAG  46 484
        putA 2822225 .. 2822242 +  -9.1   -4.7373   ACTGTGGTTAATTAA             GGCTCCG TCAA TGGAGCC              TTTTTACTCGCGTCA  90 42
A1D48_RS14505 2822857 .. 2822874 +  -3.4  -4.84527   CCCGCTGTGCACCCA             TCCG-GC AATCA GCGCGGA             TTTTTCATCTATCAA  74 220
        wrbA NONE
A1D48_RS14525 2824828 .. 2824866 +  -8.1  -4.09511   GAACGTAAAAACGTA  TAACACAAACGCCCCCGC CTGC GCGGGGGCATATG-GCTA   TTTTGCGGCAGTGTT  74 23
        cbpA NONE
        cbpM 2831133 .. 2831160 + -14.9  -2.78679   GATAAAGGCAATAAA        CCGAGGGTGGGC TTTCT GCCCACCC-CGG        ATTTACATGCACCCG  89 46
        iraM 2832490 .. 2832512 +   -12  -2.64803   TCGCCAAAAGCATAA           CAGGCTGACA TCA TGTCAGCCCG           TGGGTTTACCCCTGC  79 387
        hpaR NONE
        hpaB NONE
A1D48_RS14640 2844686 .. 2844718 +   -12  -2.50443   GAAGATTTTTATTCC      CGCCGCGATGTTTG CTCGC CATAAATCGCGGCG      ATTAATACAATCTAA  79 100
        hprR NONE
A1D48_RS14665 2847558 .. 2847571 +  -6.7  -3.35798   TGTTCCCCTTCCCTG               CCACA GGGC TGTGG                TTATCAATACAACCT  61 56
A1D48_RS14670 NONE
A1D48_RS14675 2849835 .. 2849847 +  -7.7  -3.15503   TCACATCCTTTTAAA                GGGTT GTT AACCC                TGTTGAATGTTCCCA  64 472
        sopB NONE
        sigE 2852052 .. 2852070 +  -2.4  -4.84527   TCCTCTCTCTCATTT             TGCTCT GTTTGCG GGAGCA             TTTTTAGTGTGTAAG  72 142
A1D48_RS14700 2852614 .. 2852646 + -11.4  -5.02074   GAACTGAATATGACT      TCAGGCTGGCGT GTTTTATTA ACGTCAGCCTGA      TTTTTTACAACATCA 100 116
        pipB 2853964 .. 2853980 +  -5.3  -3.31188   CTAAAAACACTATTA              TTATTTA ATT TAAATAA              TTCATAATTGTAGTC  54 201
        pipA 2854796 .. 2854817 + -10.1  -4.04806   CGCCCAAAAAACAAA           GGGGCTACC TTTC GGTAACCCC            TTGTTTAATCTGGCG  82 130
        yccA 2855990 .. 2856007 + -12.7   -5.0917   CATTCCCCTCTTCCA             GCCCTGC TTAT GCAGGGC              TTTATTTTTTGCTAC 100 45
        tusE 2856459 .. 2856475 +  -7.9  -3.55801   TTGTCCACACGAGCA              GAGCGCG GCC CGCCCTC              TTTCAGCCACTTGAT  62 98
        rlmI 2859510 .. 2859528 +  -3.2  -3.24232   TGAAAAGTGGAATAG             TATCCT CATATAA AGGATA             TCTATTTCCCGGGAG  46 43
        hspQ 2860021 .. 2860036 +  -3.2  -4.57569   TCGTTGATCACGCCA              AGCTGT AGCC ACAGCG               TTTTTGCGCCGATGG  67 179
A1D48_RS14760 2861225 .. 2861236 +  -2.2  -3.05816   AAGCGCTTCCAGTAA                TCTG TAGA CAGG                 TTAACTACGGAATCG  42 89
        mgsA 2861721 .. 2861747 + -15.8  -2.76737   CTGAAATAACCGCTA         CGCGGGCGGGAT GCT GTACCGCCCGCG         CTTTAGGGCTTCCTC 100 32
A1D48_RS14775 NONE
        yccS 2866562 .. 2866597 + -14.1  -2.55351   GCGAATGAGCCCAGT   CGGCAAGCTCCTGGCGA CGAC TCGCCGGGAGC--GCCG    CTTCATGTACGCCGA  81 41
        sulA 2867933 .. 2867966 +  -5.4  -4.80882   GTGCTAACGTTTTTT     TTGCG-AGAACGCTT GCCAG AAGCGGTTTCCGCAA     TTTTTGCTGTACGAT  76 94
        ompA 2869293 .. 2869307 + -12.8  -5.23316   CCGTCTGATAAAAAA               CCCCGC GTC GCGGGG               TTTTTTGCTCTGGTC 100 45
A1D48_RS14805 2871734 .. 2871748 +  -5.7  -2.77895   GCTGAACGCTTTTAT               TCCGA ACTGA TCGGA               CTTGTTCAGCGTACA  50 16
        fabA 2872386 .. 2872410 + -18.7  -4.82901   AAAACCCATAAAGGC          GAAACCTCCGC ACT GCGGAGGTTTC          TTTTTCTAAAGAGAC 100 81
A1D48_RS14845 2881878 .. 2881888 +  -2.4  -4.00348   TTCAACACCAGCTCC                 GCGC GTT GCTC                 TTTGGTTAATTCGAA  54 341
A1D48_RS14865 2886914 .. 2886933 +  -2.1  -5.69262   AATCCCGGAAGCAGG            TAACCTG CCAATT CAGGTGA             TTTTTATTTTTGTAA  86 209
A1D48_RS24550 2894201 .. 2894211 +  -5.4  -3.24735   CGCCCCCAGCCGGGC                 TGCT TCC AGCA                 TTGCCTGTTTCAGTG  52 494
A1D48_RS15015 2913215 .. 2913232 + -11.3  -3.98214   GGAGGATGTCAACAA             GCCCATC CGTA GATGGGC              TTTGTAATGGCTACT  91 142
A1D48_RS15135 2925828 .. 2925843 + -10.4  -4.64334   TACGTTAGAACAAAA              CCGCCT ACTT AGGCGG               TTTTCTTGCGCCCTT  91 47
A1D48_RS15140 NONE
A1D48_RS15145 NONE
         bet NONE
A1D48_RS15155 NONE
A1D48_RS15160 2928896 .. 2928906 +  -4.6  -2.88023   CGAACGATATCGTCG                 CCTC ACT GGGG                 ATTTAGTGATGATGA  48 9
A1D48_RS15165 NONE
A1D48_RS15170 2929466 .. 2929486 +  -3.9  -2.51464   CAGTACACTCGTCAA            TGCTCCTGG ACG TCAGGAGGG            ATTAATGGCTAATGC  44 45
A1D48_RS15175 2930810 .. 2930822 +  -3.3  -3.50877   TTCAAGGGGTTAGCA                GTCGC ATC GCTAC                ATTTTTATAACATGG  50 52
        pncB 2932192 .. 2932218 + -12.3  -3.41745   TTAACCATGCCTGTG         CGAAGCGCCCG GAAAG TGGGCGCTTTG         TTACTCTTCTGACCA  90 37
A1D48_RS15200 2935973 .. 2935992 +  -5.7   -4.6526   CCTAAATTCTCAATG            GTTCGCG AGCAGG TGCGAAC             TTTTTACAGGTTTCT  74 65
        asnS 2937553 .. 2937569 + -13.7  -5.78622   TTACGTCACACTCAA              GGCCAGC TAT GCTGGCC              TTTTTTTTCGCCTGA 100 44
        ompF 2939265 .. 2939280 +    -9  -5.77988   TTTATGCCTCAAAAA              CAGGAC TTCG GTCCTG               TTTTTTTATCTCTCT 100 58
A1D48_RS15215 2940632 .. 2940662 + -14.2  -3.50853   GACTGGCGTGACCGA       TAAAAAAGCCTGCA CAT TGCAGGCTTTTTCA       TTCTGCTTACCAGAC 100 50
        elyC 2952751 .. 2952775 +    -7  -3.36991   CCCGGGGCCGACCAT          CGCCAGAAGC TGATC GCTACGGGCG          TCTTTAAGCATACTG  58 251
A1D48_RS15340 2970371 .. 2970391 + -10.4  -5.26247   GGCTGCGTTATATTA           CGGGG-CGC CTTT GCGGCCCCG            TTTTATTTATTTTCA 100 77
        focA 2971619 .. 2971636 +    -2   -3.1247   AGTAAATAAAAAATC             CACTTA AGAAGG TAGGTG              TTACATGTCCGAGCT  42 63
        pflB 2973965 .. 2973984 +  -7.8   -5.2197   AAAGCGTACAAAAAA            GGCTCCAT ATCA GTGGGGCC             TTTTTAATTTTTATA  91 67
A1D48_RS15360 NONE
        pflA 2976355 .. 2976376 + -11.6  -4.39568   TTACCCGCTTTTAAA           CGGCTACC CATGGC GGTAGCCG            TTTTGCTGTCTGGAT  93 53
        trxB 2993775 .. 2993791 + -12.3  -4.89063   AACAAAAGTAAAAAA              GGCGACT ATA AGTCGCC              TTTATTTTTGCGTCG 100 56
        cydD NONE
        cydC NONE
A1D48_RS15440 NONE
A1D48_RS15445 NONE
        infA 2998663 .. 2998679 + -10.1  -5.10497   GGCGGCTGGATAAAA              GGTCGGT TTA ACCGGCC              TTTTTTGCGTCCATT  93 62
A1D48_RS15460 NONE
A1D48_RS15465 3001301 .. 3001322 + -12.3  -2.80895   CAGCGTTAATTTGCC           CCCCGCGCCA GTT TGG-GCGGGG           ATTATGTCTATTGCA  82 32
A1D48_RS15470 3001544 .. 3001563 +   -10   -4.9755   ATATTTAAGTTGAGA            GCCTGTAC AGAA GTACGGGC             TTTTTGCTTATATGT  93 40
A1D48_RS15475 3001729 .. 3001748 +   -10   -4.9755   ATATTTAAGTTGAGA            GCCTGTAC AGAA GTACGGGC             TTTTTGCTTATATGT  93 40
A1D48_RS15480 3001913 .. 3001932 +   -10   -4.9755   ATATTTAAGTTGAGA            GCCTGTAC AGAA GTACGGGC             TTTTTGCTTATATGT  93 40
A1D48_RS15485 3002097 .. 3002116 +   -10   -4.9755   ATATTTAAGTTGAGA            GCCTGTAC AGAA GTACGGGC             TTTTTGCTTATATGT  93 40
        cspD 3005668 .. 3005688 + -12.6  -5.27335   ATCCAGGAGGCAAAA            TGCCAGCC CGATC GGCTGGCA            TTTTTATTTAACGCC 100 62
A1D48_RS15520 3010176 .. 3010190 +  -4.2  -3.95324   CAGCGCAGGCAGCGC               CGTGAG ATG TTCGCG               TTCTTCTTCCCGATC  60 283
A1D48_RS15535 NONE
         hcp NONE
A1D48_RS15545 3015488 .. 3015499 +  -7.2   -2.7464   CCCGGTAAGCGTTAG                CGCC ACCG GGCG                 ATTTACCACTCGCTT  58 63
        poxB NONE
        ltaE NONE
A1D48_RS15560 NONE
A1D48_RS15565 3021369 .. 3021381 +  -4.8  -4.11692   CACTCCGCCGGACAT                TCGC CAGCC GCGA                TTTTCCAGCTCAATG  62 475
A1D48_RS15580 3022750 .. 3022780 +  -7.7  -3.97709   CCATAACCCCGTAAA      TTGTCTGGCATTCT GCCC GGGATGCC-GACAA       TTCTTCTTACCTACT  72 66
        artP NONE
A1D48_RS15590 NONE
        artQ NONE
        artM 3025899 .. 3025925 + -10.9  -5.64274   ATATTGAATAAATCC         GACGGACAAGT GGTTA ACCTGTCCGTC         TTTTTTTATCCATCA 100 118
A1D48_RS15605 3027021 .. 3027041 +  -3.9  -4.93877   AGACCCAGACGGCGA            TACTGCTCC GCC GGAGCATCA            TTTTCTTTCATCAAA  75 272
        grxA 3039639 .. 3039675 +  -7.1  -5.41143   CTTTTCGCCTGATTG    CTCTGGCAACGCCCTCT GCC GGAGGGCGCTATCGGCG    TTTTTTTCGCCGGTG  95 29
A1D48_RS15695 3042228 .. 3042238 +  -8.2  -3.09933   TAAAATCGCTTCACG                 CGCC AGC GGCG                 TTCGATCCGTTACAA  60 253
A1D48_RS15710 NONE
A1D48_RS15715 3045092 .. 3045105 +  -4.5  -3.48105   ATAACCCATTGCCGC               CGCTT AACC AGGCG                TGTTTACTGACTTCA  52 189
        ybjG 3047158 .. 3047186 + -14.7  -3.70902   AAAAAAGAGTAATAT        TAAGCGCTCTGTA TGG TGCGGAGCGCTTA        TTTAACTCTCCAGGG 100 48
        deoR 3047969 .. 3048003 +   -20  -3.09908   CTGATGTATTAACTG     CCCGTTGCCGGATGCG ACG CGCACCCGGCAACGGA     GTTATTTTACGAGAA 100 29
A1D48_RS15740 3050494 .. 3050504 +  -4.6  -3.14564   ATTTCATCGCCGCCG                 CGCG GAC CGTG                 TTCATGCAGCCATAG  47 437
        rimO 3053269 .. 3053284 +  -8.2  -2.50074   TTAACGCCACCTCCC              CCGGCG CGGG TGCCGG               ATGTGTTATCCCGCC  59 37
        moeA NONE
        moeB 3061851 .. 3061869 +  -8.8  -2.87564   GATAAACATACCAAA             GCACGGTT TAT GGCCGTGC             TGTATCAACAGATAA  65 51
A1D48_RS15795 NONE
A1D48_RS15800 3065496 .. 3065513 + -11.3  -3.14211   TGGCGCTACGCTTAA             CAGGCCT GCGC AGGCCTG              TTAATCAGAAGGGAT  81 81
A1D48_RS15810 3068093 .. 3068113 +  -4.8  -4.17987   AGTTCGTTGTCGCCA           GC-GGTAAT CAGT ATTACCAGC            TTATTTCGTTCTTTC  65 264
        ldtB 3072696 .. 3072722 + -19.6  -3.03243   ACAGACTCTGCCTGC         GAAGCCCGATAG ATA CTATCGGGCTTC         TCTTACGGCATCAGT 100 40
        mntS 3074658 .. 3074684 +    -8  -5.77632   TTTATTTTGCATCCT         CAACGGAAATGG CGC CCATTTCCCCTG         TTTTTTTGTGGTTTT 100 62
A1D48_RS15855 3076489 .. 3076506 +  -8.4   -5.0925   TTCAGGCAAAAAAAA             TCCGCC CCGAAA GGCGGA              TTTTTCATTTTCACC  91 48
        rhtA 3078384 .. 3078410 +  -6.8  -3.61398   TTTTTGTCATATTTT         TTCTCATTTT TTACATT AAAATGAGAA         TTATTACCCACCAAA  64 124
A1D48_RS15870 3079227 .. 3079245 +  -7.4  -4.19953   TAAGTCATCCCTATA             CCCCTG CCTGGCA CAGGGG             TTTTGCACTTAAATA  74 161
        glnH 3080329 .. 3080369 +  -9.9  -3.69216   AACGACCTGATGTTG GCTTGT-GGCCCGGT-AGTG AGGA CGCTCACCGGGCCTAC-AGC TCTTTTCCGTGACGG  77 41
        glnP 3081102 .. 3081113 +  -4.4  -2.95448   GTCGTCTTGAAAGAA                GGAT GAAA ATCC                 TGTGATTGAATTTAA  48 9
        glnQ NONE
        ybiO 3084222 .. 3084263 +  -5.7  -3.66166   GGTCGTCATCCATAA AGGTCCAGGCGATAAAGCG GCTT TGCTTTTGCCCCTGGGCCA  TCTCTTTTTTCACCA  60 69
A1D48_RS15900 3085619 .. 3085630 +  -2.2  -3.35679   ATTCCTTTACGCTCA                TGCT TTTT AGCG                 TTCTGCGTCGCAGAA  45 72
A1D48_RS15905 3086246 .. 3086267 + -13.7   -5.8187   TTGTTACCCTTATTT           GCCCGTCCG CCAC TGGACGGGC            TTTTTTTATTCGCTA 100 154
A1D48_RS15950 3099242 .. 3099281 +  -3.1  -2.82987   CAAACCTGAAATGTG CGCCTAAAG--TTAATCAA TCGA TTGATTAAGACTTAGGGCG  TGTGATGAATATTCC  43 55
A1D48_RS15955 NONE
        hlyD 3100944 .. 3100960 +  -3.6  -3.65046   TTTAATGACGAGGCA              CGGCAT GAGTG AGGCCG              TTATTACGCTGCACG  51 14
A1D48_RS15965 NONE
A1D48_RS15970 3103857 .. 3103882 +  -4.7   -3.9941   TAAGGCGTTCACGCC         GC-CATCCGGTA TTA TGCCTGATGCGC         TTTGCTTATCAGGCC  59 75
A1D48_RS15975 3105392 .. 3105404 +  -4.8  -4.46212   CACGAACGCGTTGTT                GCCA CTTCA TGGC                TTTTCTCCTGAAGCA  68 388
A1D48_RS15985 NONE
        clsB NONE
A1D48_RS15995 3108504 .. 3108530 +  -5.9   -4.4009   ATAAATTTAAGCAGA        CGCGTTTTCGCT TTCC AGC-ACAACGCG         TTTTATCCGGTAAAA  70 37
        yvcK 3115342 .. 3115369 + -13.6  -2.90219   CTGCGCTTATCAGAA        GCCTGTTTACACC GAA GG-GTAAACAGGC        TCTCTCCCCCTTCTG  87 59
        bioA 3125821 .. 3125837 +  -2.2  -3.36803   TTTAGCCATTAATCA              GCGGTA AGCGA TGCTGC              TTCTGGCTACACTTC  45 29
A1D48_RS16090 3126743 .. 3126765 +  -5.5  -4.33417   GTCGGCAGGCTATCC          ACGCTGTGCG GGTG CGC-CAGCGC           TTTATTCTCGCTGGC  69 417
A1D48_RS16120 3134315 .. 3134349 + -13.5  -4.25104   CCGGTTCAGGCTTAT     AAACGGGCCGCCGCA GCAGA TGTGGCGGCCCGTGG     TTTTACTGCAAGCGA 100 49
A1D48_RS16130 3136859 .. 3136877 +  -3.8  -3.72695   TCCAGCACCATGACT             TTATCCGC CAG GTGGAGAA             TTTCATCGAGAGAAT  53 492
        modE NONE
        modF 3141707 .. 3141721 + -11.4  -3.29263   AATGTATTATCAGAA               TGGCGC CGC GCGCCA               TTCTGGAACCACTCT  83 40
A1D48_RS16165 3142801 .. 3142815 + -12.8  -5.44119   TCCGTTTAATTCCCA               GGCGCG TAA CGCGCC               TTTTTTTCGGATAAA 100 55
A1D48_RS16170 NONE
        galT NONE
        galK NONE
        galM 3147406 .. 3147428 +  -7.7   -2.8001   GGTTATGCGTAAGCA           TTGCCGCCA ACACC TCGCGGCAA           TATAATGAGAATTAT  60 179
        gpmA 3148244 .. 3148258 +  -7.8  -3.30124   TCACCTTTGCCGGAT               GGCGGT ATA ACTGCC               TTATCCGGCCTACGA  65 41
A1D48_RS16215 3152109 .. 3152126 + -11.3  -5.54907   AAAAGTCTGATAACG             GGAGAGC TTTC GCTCTCC              TTTTTATTTTGTCAG 100 48
A1D48_RS16220 3153143 .. 3153169 + -13.6  -3.51934   ACCATTAACGGGAAA         GCGCGCGCGATC CTC GCTCCCGCGCGC         TGTTTATCCACAGGC 100 33
A1D48_RS16375 3178766 .. 3178795 + -17.9  -2.79535   AGCGTTAATTGACAA       CCGGATGGCGACG CAAC CCTCGCCATCCGG        TACATTTTCCCTTTT 100 33
A1D48_RS16380 3180036 .. 3180047 +  -4.4  -4.21194   TAAAACGGGCGTGAG                GACA GTGT TGTC                 TTTTCAATAATGCCG  62 120
A1D48_RS16480 3198538 .. 3198566 +  -5.9  -4.19177   TTTCTCGCCGCTTCA        TAGGCGGAAAGCG TCG CGATTCTCGCCTG        TTTGTGTTCAACAAT  67 89
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC NONE
        kdbD NONE
        kdpE 3208428 .. 3208453 +  -9.7   -2.7471   GTCATTTATTTTCGG         CGTCGCGAATA ATTA TTTTCGCGGCG          ATATTATATTTTATG  69 80
A1D48_RS16525 3209059 .. 3209081 +  -2.8  -3.96148   ATCAGCGGGATAGCT           TTGATTTTTT CCG GAAGAATCAG           TTTCTCATGCGAGAA  54 328
        speF NONE
        potE 3212657 .. 3212685 + -14.6  -3.18657   CACGGCTGATGGCGC       GCCCGGGCT-GCG GTAA CGCTAGTCCGGGC        ATTTTCACTCTTTGA  95 32
A1D48_RS16540 3213279 .. 3213294 + -10.4  -5.12068   CGTTAATACAAAAAA              GGAGCC GTAA GGCTCC               TTTTTCTTCCATATC  93 104
A1D48_RS16555 3216489 .. 3216527 + -13.1  -2.57244   CTAACTGATTAAAAA  C-TCATCGCCTGTGCGCG ATTA CGCGCGCGGGCGTTGGCG   TCGCTTCCTCGCTGA  84 37
A1D48_RS16560 3216942 .. 3216959 +  -3.4  -3.37755   CGTGTAGCAGAGCGT             GCAGTC CCGCGT GATTGC              TGTTTCCGCATATCT  48 63
        fldA 3217745 .. 3217761 +  -6.5  -4.55128   CAGTTTTATTAATAT              CTGCGAG AGA CTTGCGG              TTTTCATTTCGGCAT  76 185
         fur 3218338 .. 3218355 + -11.3  -5.39721   TAAATCTTTCGAAGA             GCCAACC GCCC GGTTGGC              TTTTTTATATCCTCC 100 44
        tcuR 3219338 .. 3219353 +  -3.2  -3.14683   CCGGTGAATGGCCAG              GCGCAA CCCT TTACGC               TTACTAAACCCCTGT  46 3
        tcuA NONE
        tcuB NONE
        tcuC 3223519 .. 3223537 +    -6  -3.74198   CCCGCACGCTTTCTT             CGTTAGCA AAT TGCTGATG             TTTACGCTCTTTTTT  60 202
        nagB 3230806 .. 3230831 + -14.7  -2.87672   TCTGTAATGTTGTCT         CCGCCCCGC CAGTCAAT GCGGGGCGG          TAAATTTTTGATATC  89 34
        nagA NONE
        nagC 3233280 .. 3233296 +  -3.7  -2.86177   AAATTCCCTGGGTAG              TTCATGA CCA TCAAGAA              TGTAATCTGCGATAT  46 69
        nagD 3234011 .. 3234027 +  -6.5  -3.49951   CTGGATTTACCCTTC              CGTCGCT GAG ATCGACG              TTATCTAAACCTGTC  60 1
A1D48_RS16640 3236006 .. 3236021 + -10.4  -5.60993   TTAACGATGACGAAA              GAGCCC TTAG GGGCTC               TTTTTTTATAGCAAG 100 42
A1D48_RS16645 NONE
A1D48_RS16650 NONE
A1D48_RS16655 NONE
A1D48_RS16660 3236604 .. 3236620 +    -3  -3.33815   CATCGAAGAAATCAT             CTG-GCT ACGT AGCTCAG              TTGGTTAGAGCACAT  46 39
A1D48_RS16665 NONE
A1D48_RS16670 NONE
A1D48_RS16675 3236926 .. 3236953 + -13.6  -3.30597   TACCCCAGCCACTTT        TAAAAAGCTCGC TTCG GCGAGCTTTTTG         CTTTTCTGCGTTTAT 100 30
A1D48_RS16680 3237717 .. 3237731 +  -4.2  -4.08216   CAACCCCAACGCATA               CTTCAG CGC CTGACG               TTTTAGCACGCCTGC  59 110
        miaB 3240494 .. 3240526 +  -4.8   -4.6955   GCCTGTCGGGCTTCC     TGGTCATGGCCTGTC GCCC GACGGGCCTTG-CAA      TTTTCTCTCTTCATC  73 77
A1D48_RS16695 NONE
        ybeY 3242177 .. 3242191 +  -4.2  -3.30243   AGTAGCTTGCCGGAT               GGCG ACGCTTG CGCC               TTATCCGGCCTACAT  50 39
        corC NONE
         lnt NONE
A1D48_RS16715 3246143 .. 3246159 + -12.3  -5.76949   GGCAACAATCTTCGA              GGGTAGC GCT GCTACCC              TTTTTTTTCGGAGTA 100 148
        gltJ NONE
        gltK NONE
        gltL 3248328 .. 3248349 +   -13  -2.90714   GCACTAATCTTCCCG           GCGCGCAC GTCAGA GTGCGCGC            TATCTCACGCTTTAC  86 34
        rihA NONE
A1D48_RS16740 3250648 .. 3250681 + -11.9  -3.51633   CAGGCGTGACATTGA     TAAAGATCACCACGCC AGA GG-GTGGTGTTCTTTA     TTCTATAAACTCTCT  88 32
A1D48_RS16745 3252388 .. 3252402 + -12.8  -3.65529   ATTGACGAGCCGAAA               GCGCCG TAA CGGCGC               TTTCACTGCCCCTGT  95 17
A1D48_RS16770 3258031 .. 3258051 +  -4.6  -2.74012   AACCCCACCACTTCG            CCACTGTG ATACA CGCCGTGG            TGATTCAAATCCTGG  45 196
        leuS NONE
        lptE NONE
        holA NONE
        nadD 3268356 .. 3268373 +  -6.9  -2.85668   GTAACCAATGCCAGG             TCGCCTG TTGC CAGGCGC              TATCCTGTAACGCTA  53 290
A1D48_RS16825 3269909 .. 3269925 +  -5.1  -3.78934   GGTTTCGCCCATTGA              CAGCC CCCGACA GGCTG              TTATTCTCCGCAGCC  59 69
        rsfS NONE
        rlmH NONE
A1D48_RS16840 NONE
        mrdB NONE
        rlpA NONE
        dacA 3276575 .. 3276605 + -13.5  -5.48825   TATACTATGCATCAG      TAA-AACTCCCGCC CTGT GGCGGGAGTTGTTA       TTTTTTTACGTAATG 100 76
A1D48_RS16860 3276904 .. 3276918 +  -2.1  -3.31461   ATTGTAATACATCCA              GA-CGG TTAC CCGGTC               TTATCCGGGTAACTC  45 34
        lipB 3277770 .. 3277784 +  -8.6  -3.10597   GCATGGCCTCTTCAG               TCCTCA TGA TGAGGA               ATTTTCCGTGAACAA  66 159
A1D48_RS16870 3278964 .. 3278988 +  -4.9  -3.38768   ATTTTACATTTTGCC          GGGCTGTCAGG CTG CTTTATGGCCC          TTATCAATGATATAC  54 98
        lipA 3280100 .. 3280114 + -11.4  -5.58454   TCAGGCAAAAAAAAA               CCGGCA ACT TGCCGG               TTTTTTTACTCTGCG 100 63
        crcB 3281757 .. 3281773 + -10.8  -4.20042   AGCGCAAAAAAAAAA              CCCGCC GAAAG GGCGGG              TTTTGAAATCTTGCT  88 40
        dcuC 3284545 .. 3284575 + -13.9  -3.02043   GGCTGATAGCCGGTA       AGCCGGGGCGAGG GAAAA CATCGCCCCGGCA       TCTTAAACCAGGCTT  87 35
        citC NONE
        citD NONE
        citE NONE
        citF NONE
        citX NONE
        citG NONE
        citT 3294051 .. 3294076 + -15.5  -5.37345   GTAGGTTAAAAATGA         TGCCGTTCAGG TTCA CCTGAGCGGCA          TTTTTTATGATTAAA 100 54
A1D48_RS16965 3295092 .. 3295114 + -12.7  -5.07652   ATCATGAGAGTTAAA           CCCTCGCCG CCAGA CGGTGAGGG           TTTTCTTTTGGGACC 100 179
A1D48_RS16975 3295616 .. 3295635 + -12.2  -3.75897   TAATGCGTTTACACA            GAGGATGC CTGC GCATCCTC             TTTCCGTTAGCCCTT  93 58
        uspG 3297579 .. 3297605 + -20.2  -4.75372   GCTAAAAACTGACAC         GCCCTGCCAGGT CAC GCCTGGCAGGGC         TTTTTACTGCATCAT 100 49
        dsbG NONE
A1D48_RS17030 3306934 .. 3306944 +    -4  -4.42062   TTCAATGTATATGTC                 TACA TAA TGTA                 TTTATTTAGCAAATA  64 71
A1D48_RS17035 NONE
A1D48_RS17040 3309204 .. 3309226 + -11.9  -3.01712   GGCGCGCAGCATATC           CGCCAGCGC CAGTT GCGCCGGCG           TATTGACGCAAAACG  76 353
A1D48_RS17050 3311508 .. 3311532 + -12.9  -3.19602   ACCTGTCATCCAAAT          GCCCTCTCC TTATTCT GGAGAGGGC          TATTGATGTAAAAAG  91 281
        fepB 3320164 .. 3320177 +  -3.8  -4.09685   GCGCCGCGCCGATAG               CGTC TCCCGT GACG                TTTTGCGCGGTCCAC  60 252
        fepD NONE
        fepG NONE
        fepC 3324163 .. 3324183 + -11.2  -4.14739   CACACAGATGACAAA            GCCGGATA ATCGC TATCCGGC            TTTTCGGGTAAATCA  91 46
A1D48_RS17135 3333416 .. 3333427 +  -4.4  -3.11289   GAATTAGCAAAAAAC                GATG CTGA CATC                 TCATTTTCCCCTTCC  49 71
        entD NONE
A1D48_RS17145 NONE
A1D48_RS17150 3335698 .. 3335730 +  -4.9  -4.29845   AATATCATACACCTT     CTGGTCGGTGT-CGA GCAGG TCGCGCGCCG-CCAG     TTTTAGCTTCCGTTC  66 157
A1D48_RS17160 NONE
A1D48_RS17165 NONE
        nfsB 3337914 .. 3337931 + -12.7   -5.1361   TAATCCCCTACCTAA             GCCGGAC GCCC GTCCGGC              TTTTTTCACCTTTCT 100 38
A1D48_RS17175 NONE
A1D48_RS17180 NONE
A1D48_RS17185 NONE
A1D48_RS17190 3340594 .. 3340608 +  -3.4  -3.53444   TTGGGCTTCTTGCCA               GCGCGC TGG GCCTGC               TTTGACGAGAGGTAA  50 6
A1D48_RS17195 NONE
A1D48_RS17200 3342833 .. 3342848 + -11.8  -4.66609   AGGCCTTTCTTCTGC              GGGGCG CTAG CGCCCC               TTTTTCCCTGAACTA 100 116
A1D48_RS17220 3349755 .. 3349771 +    -8  -3.05844   GCCTTGTACGGACAG              GCCGAA CAGCA TTCGGC              TATTCGAATAAACGC  60 487
A1D48_RS17230 3352666 .. 3352680 +  -4.2  -2.63549   TAGTTCGCCCTCATG               AGTCAG ATG CTGACG               ATATTCTTCCGGATG  44 461
A1D48_RS17250 3355672 .. 3355693 +  -5.1  -3.53012   CGCTCGGACGATAAA           C-GTAGGCTG AAC CCGCCTACAG           TTTGACGCCGCAGGC  56 27
A1D48_RS17260 3356412 .. 3356425 +  -2.4  -3.32844   GCCAGCAAAATACTC               TGAC ATCATC GTCA                TTATCCCGTCACGCG  45 72
A1D48_RS17265 3357026 .. 3357047 +  -4.4  -3.94811   CGAAAAACATGCAAA           GCCTTGCA AGCCGA TGCAAAGC            TTTGTGCGTGCTGTT  59 241
A1D48_RS17270 NONE
A1D48_RS17275 NONE
A1D48_RS17280 3359996 .. 3360023 + -13.6  -3.24289   ATGTTCACTATAAAA        TAAAAGTGGGTG TACA CGCCCACTTTTA         TTACATATTTAAAGT  93 48
        fimW NONE
A1D48_RS17305 NONE
        fimY 3363768 .. 3363779 +    -3  -3.59781   ATTACATAACAAATA                CTAA ACAA TTAG                 TCTTTCATATTATTT  50 226
        fimZ 3365175 .. 3365187 +  -2.6  -4.37092   GCGTAGCGTCACCGG                CGGC GTGAA GCTG                TTTTGTCGGCCAGGT  60 397
        folD NONE
        ybcJ 3372578 .. 3372611 + -12.5  -2.75307   TGGCCTGATACAGAG     TGCCGGATAGCGACGC AAA GCGTC-TTATCCGGCC     TGATTACGCTGTCTT  82 33
A1D48_RS17365 NONE
A1D48_RS17370 NONE
A1D48_RS17375 3374917 .. 3374939 +  -5.5  -3.97368   CGCGCTTCAAACGCC          TC-GCCGCCC GCCG GGGCCGCTGA           TTTATCCGTTCCACG  63 448
        ppiB NONE
        lpxH 3377411 .. 3377421 +  -2.4  -4.08394   AAGCAGCGTGTCCCG                 CACC ACA GGAG                 TTTTAAGACGCATGT  55 121
        purE NONE
        purK 3379194 .. 3379235 +  -5.7  -3.36492   ATCGGCTTTGGCAAA CGGCGC-CAGCTCATCGGGC GAA GCCTGACGAATAGCGCGCTG TTGTGGCGTTCCCCA  56 213
        allD NONE
        allC NONE
        allE 3387165 .. 3387184 + -13.6  -5.71983   GCTATGTTGGATTTT            GCCACGGT GAGA ACCGTGGC             TTTTTTTATGCTTAA 100 74
        allS NONE
        mnmH 3401370 .. 3401395 +  -6.1  -3.35197   TAGCTTACTTTTATT         GCCGGCT-GACG CTA CATTGAGCCGGC         TTAGTGTCTGTCGCG  59 38
        tesA NONE
A1D48_RS17540 NONE
        cnoX 3411075 .. 3411111 +  -7.2  -2.91869   CCTACCTGTCGTCCT   CAGGCCGGAT-AAGGCG CTTG CGCCATCATCCGGCCAC    TATCATGATTTCTTG  59 72
A1D48_RS17560 NONE
A1D48_RS17565 3414447 .. 3414459 +  -5.5  -5.40474   AACCGAATGGCTTTG                CTGGT TAA ACCGG                TTTTTTTCGCCACAT  95 402
        copA 3417106 .. 3417131 + -16.3  -3.39288   AAGCGTAAAAAGTCC         TATCAGGCAGC ATCA GCTGCCTGATA          TATTATTAAGCCATC 100 33
A1D48_RS17580 3418105 .. 3418119 + -12.8  -4.36914   GTTGACGTCCCGTCA               GGGCGC ATT GCGCCC               TTTTCTCCAACGCGC 100 52
A1D48_RS17585 3419016 .. 3419035 +  -3.4  -3.11291   CATCGTTATTATTAT            CCCGACGC TTTC GCTTCGGA             TCTTCAGATTGTCGC  45 83
        ybaK 3420036 .. 3420046 +  -8.2  -3.89956   AACTGTGGATAGGCG                 CCGG AGT CCGG                 TTTCATCTGTGCTAC  71 422
A1D48_RS17600 NONE
A1D48_RS17605 3425114 .. 3425135 +  -7.9   -4.4518   AATTCAGCAATAGCC           CCCGGCAGC AGCG GATGCTGGG            TTTTACGTTTTGCTT  79 447
A1D48_RS17615 3427198 .. 3427243 +  -2.5  -5.00616   TGAGTTTCAGCATCA TATCAATATGTTCCGGCGTCG CGTT CAGCGCCGGAATGTACGCATA TTTTTTACCGCCCGC  74 54
        priC NONE
A1D48_RS17675 NONE
A1D48_RS17680 3437274 .. 3437314 +  -3.9   -4.2803   CTACGCTGTCGCATT AGC-G-GCGCCGCGCGC ACTCATAAA GCGCGCGGCCCACCGCC TTTTAGCTTGCCGTA  62 24
        acrA 3442766 .. 3442780 +  -2.8  -3.14878   GCAAGCGGTGATCAA               CCTG CTCAGCC CAGG               TCTTAACTTAAACAG  45 5
A1D48_RS17700 3445977 .. 3445992 + -11.8  -5.00616   GCTCACTGTTGATAA              GGCCGC GCAA GCGGCC               TTTTTTACACAAAAA 100 44
        tomB 3446803 .. 3446815 +  -2.7  -4.34263   TCAACGCCACCAGGG                CTAAT CCT GTTAG                TTTGTCTTGTTAAAA  60 0
         hha 3447186 .. 3447197 +  -5.8  -2.91869   CACATACCAATAGCA                GGGA ACGT TCCC                 TCTAATACTTTATTA  51 137
A1D48_RS17715 NONE
A1D48_RS17720 3448399 .. 3448422 +  -8.1  -2.94144   GTCGGTAATAAAAAA          GTGCGCACC CTCCCT GGTACGCAC           TGCTTTCCCTGAACC  61 33
A1D48_RS17735 3450849 .. 3450865 +  -2.9  -4.16842   GCAATTGCAACCCAT              CAGGCAT CGG ATGCTGG              TTTCTTGCGCATCCG  58 246
A1D48_RS17745 3451576 .. 3451589 +  -2.3  -4.56597   GGCGCCTGTTTACCT               TCGGT ACGT ACCGC                TTTTTGCGACAGCAC  65 353
        tesB 3452932 .. 3452946 +  -9.2  -3.17212   CACAATTAAAAAACA               TGCCGC TAT GCGGCG               TTAATGGCCTGATGA  70 32
A1D48_RS17785 3460121 .. 3460139 + -10.3  -3.14344   AGAAACCAAAAAAAA             GCCAGAC TGAAT GTCTGGC             TTGCTGGAAGAGATC  74 39
A1D48_RS17795 3462814 .. 3462825 +  -2.2  -3.15663   TACGCGTTACCATAT                TGGC TTTC GTCA                 TTGATCAGGATAACT  44 63
        queC 3463847 .. 3463864 +  -5.5  -3.15396   CAGTAGATCGCTCAA             TACCGCC GGGC GACGGTA              ATTTATATTGATGTT  50 336
A1D48_RS17860 3475104 .. 3475119 + -11.8  -2.92091   ATAGCAACAACAAGA              CCCGGC AGAA GCCGGG               TCTGTAGATGCCTAT  80 40
        ampG 3476835 .. 3476847 +  -6.3  -3.35996   TGTTTTATTTTTACA                TTGGT TAT ACCAA                TTATCCCTCAACATC  59 252
A1D48_RS17870 NONE
A1D48_RS17875 NONE
A1D48_RS17880 NONE
A1D48_RS17885 NONE
        cyoE 3481876 .. 3481897 +  -6.5   -5.9003   TTGCTATTGAAAAAA           CCGCTGTGT CGCA AAACGGCGG            TTTTTTTATTCATTT 100 47
A1D48_RS17905 3486857 .. 3486900 +  -7.4  -3.14463   CAGCAAAGGATGAAT GCTGTATTGCCGGATGGCGGC GAG GCT-CTATCCGGCATAACAAC TTAATCGCGGAAGTT  62 28
        panE NONE
        yajL 3489095 .. 3489109 +  -7.1   -3.2614   TACGGGCGTTCGCCC               TGCGC CAGAC GCGCA               TTAATATGCGCAATC  62 138
        phnR 3491944 .. 3491954 +  -3.2  -2.53379   ATAAGCGCAGCATCA                 TCCG GCG TGGA                 CTGATTTATTTCTCT  42 109
        phnS NONE
        phnT NONE
        phnU 3495046 .. 3495058 +  -6.3  -3.74693   TACCGGCGTAAGGAG                TTAGC CAT GCTAA                TTTGGTCACCTAAAG  64 22
        phnV 3496226 .. 3496270 +  -2.2  -3.82097   TTCGACCACCTTATC GAGAATACTGAAGTCGAA ATTTTCTTC TTCGGCTTCAATTTTCGC TTTAATGGCTTTCAC  52 402
        xseB NONE
        ispA NONE
A1D48_RS17975 NONE
A1D48_RS17980 3501670 .. 3501712 +  -8.3  -3.68351   CGACATATTGTTCGG GGGTAGGCCGGAT-AAGGCG TTTA CGCCGCCATCCGGCAAACCC TTTAAATAATACCGA  72 85
A1D48_RS18015 3506762 .. 3506772 +  -6.8  -4.21812   CGAAATATTTAGAAA                 CGCA AAT TGCG                 TTCTTTTCACTCCCG  72 272
A1D48_RS18020 3507690 .. 3507713 + -12.4  -2.72144   CTAAACCTGCAAAAA          AGGCCAGAGG TCGC CCTCTGGCCC           GTTTCGGGCGCATGC  82 37
        acpH NONE
A1D48_RS18085 3517158 .. 3517175 + -12.7  -5.28176   AGTGCATTGATAAAA             GGCTCGC GAAT GCGAGCC              TTTTTTATGCGTGCG 100 44
        sbcD NONE
        sbcC 3529110 .. 3529124 +  -5.6  -4.64861   AATTCACAGCCACAG               CGCGCA ACA TGCGCC               TTTATTTTCGGCAGG  74 164
        araJ 3530363 .. 3530378 +    -6  -3.06183   GGCCACAGCCAGGCC              GCGCCG CGCA CGCCGC               TTGAATCGCCATGCC  56 72
        rdgC 3532285 .. 3532320 + -10.4  -3.17723   AAGCGCAGCGCTAAC    CAGAGGGT-CCCTCTCC GCC GGAGAGGGGACTCACCG    TTCCGTTACAAATAG  74 27
        proC 3535967 .. 3536009 +  -2.8  -4.18676   TAAATCCTGAAGCCC GGCTGGACGTCATGCCGCCAC TTCG GTG-CGGT-T-ACGTCCGGCA TTCTTTGCTTTATAA  58 31
A1D48_RS18180 3537830 .. 3537840 +  -5.4  -4.14511   TAAGTAACGTTATAA                 CAAC TGT GTTG                 TTTTAAAATACGATT  65 9
        ddlA 3541684 .. 3541711 + -12.8  -3.70674   CGATGTAATAGCGCA        CGCCCGAT-AGCG CAA CGTTTATCGGGCG        TCTTTTACCTCATCC  95 33
A1D48_RS18210 3542498 .. 3542529 +  -5.1  -3.86346   GTCACCAATAAACCT      TAGCGCGCTGGAGA AAATA TC-CCAGCGCGAAA      TTTATCGCCCCATAC  61 30
        ampH 3546367 .. 3546402 +  -3.9  -5.19251   TCCCGCATCCTGAGT    CGTCGCGCCTCGCGCT ATATC AG-ACGAGGCGCAACC    TTTTTGTTAATATTC  79 28
        hemB 3551501 .. 3551522 + -14.4   -3.5936   GTTAATTCTGTTACA           GGGCGGCG CGCTGC CGCCGCCC            TTTCCCGACTTTACA 100 36
        prpR 3559177 .. 3559201 + -12.2  -4.91109   TGCCAGGAATAAATA         TACCCGCC-GG AAAC CCAGGCGGGTA          TTTTTATGATGCAAC 100 117
A1D48_RS18280 3560355 .. 3560395 +    -9  -3.28712   GAAGGCGTGACGCAC CGCTAGTTTGCCCGGTAGC CTTT GCTACCGGACG-ATAAGCG  TTATCAAAACGCCCA  71 20
        mdsA NONE
        mdsB NONE
        mdsC 3582751 .. 3582800 +  -9.7  -3.10344   AGAAAAAGCAAGGTT AGCCCAAATAGCGCCCGCGTCGC CAGT GCGGCGCGCGCGCTAAACAGGCA TATATTGCCTGCAAA  71 24
A1D48_RS18415 3590791 .. 3590816 + -13.3  -4.18018   AAATAATTGTCGCTA         CGGTCTGGCGT TGAA ACGCCAGACCA          TTTTCAATCGCCAGG 100 35
A1D48_RS18420 NONE
A1D48_RS18425 NONE
        stbD NONE
A1D48_RS18435 3596377 .. 3596395 +  -3.2  -3.63991   ATTATCTGATTCAAT             TAATGTGT AGA ACGTATTA             TTATTACGCATCATA  51 199
        phoE 3600766 .. 3600810 +  -9.4  -2.57463   ACCAGTTCTGATAAG TC-GC-ATTGTGCCTGATGGCG CTA CGCCATCAGGCATGACAGCAGG GTTATGCCGACAGTT  68 30
        pepD 3605123 .. 3605159 +  -9.5  -4.66318   ACCTTCACGCTAATC   CCG-CTCGCCAGGTGCG TGGCC CGCAC-TGCCGAGTCGG   TTTTATTAACGTGCT  91 380
A1D48_RS18500 3608949 .. 3608970 +  -8.7  -3.91798   AATAACGCCCATTCG           CCTGGCATA ATCT TTTGCCAGG            TTTCATTCCCCGTTA  73 36
A1D48_RS18515 3613171 .. 3613188 + -14.1  -5.08088   TCTCGCCTCTTTCCT             GCCCCGC TTTC GCGGGGC              TTTTTCTTGCCGCTT 100 45
A1D48_RS18520 3614032 .. 3614052 + -11.8  -2.97676   TCACCTTGTAAGCAA            CCTGCCGC TCACC GCGGCGGG            ATTGTTTCACTCCGT  80 30
A1D48_RS18525 3614605 .. 3614628 + -11.8  -4.35483   TGAGTAAATATTTTT          GCCCGTTATT CCTG GATAACGGGC           TTTATTCTGGTCGGG  95 34
        pagN 3615759 .. 3615774 +  -3.9  -3.39483   GAAAATCGTTGAACA              GGTGC AACCTG GCGCC               ATTTTTCAGTACACT  49 123
A1D48_RS18540 3616524 .. 3616537 +  -5.3  -4.37506   GCCTCCCCACCGCAC               GAACA ATGA TGTTC                TTTATATTTAATCGT  68 389
A1D48_RS18590 3625450 .. 3625463 +  -3.9  -4.27192   GGGATGTTTTTCATA               TAATG GATT CATTA                TTTTAATAAGCATTT  64 134
A1D48_RS18615 3628186 .. 3628213 +  -7.8  -4.47786   CTAAATAATAAAAAA        GCCGGG-AAGA TTTAATT TCTTTCCCGGC        TTTATTTAACTAATT  82 56
A1D48_RS18630 3630506 .. 3630533 +  -8.4  -4.04295   TTAAATAACAAAAGA        GCCGGGAAGA TTTAATTT TCTACCCGGC         TTTAATTCTAATTAA  78 37
A1D48_RS18650 3633689 .. 3633718 +  -6.4  -5.11836   GTTAAATAATAAAAA       GCCAGGAAGATT TTATAT AATCCTCCCGGC        TTTTATTTTAAATAT  83 55
        tagK NONE
A1D48_RS18815 NONE
        tssE NONE
        tssF NONE
        tssG NONE
A1D48_RS18835 3670942 .. 3670966 +  -8.6  -5.95166   GAAGACGAAAAAAAA          CCGTATCCCT TTTAC AGTGATACGG          TTTTTTTTACTTCAC 100 274
        rnhA 3672476 .. 3672493 +  -2.6   -2.7976   ATAGTGGCTACCAGG             CGGAAG CTTAGC CATCCG              GTTTGCGATATTGCC  41 15
        gloB 3674025 .. 3674037 +  -3.3  -2.93623   CATTCGCTAACTTCG                CCGTT ATG ATCGG                TCGTCTTTTAAGCAA  44 55
        mltD 3675459 .. 3675479 + -11.1  -4.31085   ACGAAAAAGCCAAAA            GGCGCCG CTTCCCC CGGCGCC            TTTTAAATTGCTATA  90 50
A1D48_RS18890 3679583 .. 3679596 +  -8.1  -3.35088   CATCCAGATGCAGAT               CCTGC GCCA GCAGG                TTGCTTGCCAGATTT  64 144
        metN NONE
        metI NONE
        metQ 3689634 .. 3689651 + -12.7  -3.64915   TGTAATATTATTCAG             GACGGGC TATT GCCCGTC              TTGTCATTTATGCAA  95 63
        rcsF 3690099 .. 3690123 +  -2.1  -2.90349   TGTATCGGGTCCGCC          CTGAATATTTC GGC GAAATGAGCAG          CTTTCAGTTTGAACA  41 5
        tsaA 3690886 .. 3690904 + -13.2  -3.13343   TCACTTTTTTTGTAT             CAGGCTCA CAT TGAGCCTG             TTCGATCGTTCAACT  91 88
        proS 3692700 .. 3692720 + -16.9  -4.72497   CGGCAGATATGTAAA            GGCCTCGCA CCC TGCGAGGCC            TTTTATTAGTGGGTG 100 73
A1D48_RS18980 NONE
         rof 3695272 .. 3695303 +  -3.7  -5.04868   CGGCGTGGTATCTCG     TC-GCCAGG-GCGGG ATCC CCTGCTCCTGCCAGA      TTTTCTTTAATTTAC  77 229
         map 3722248 .. 3722278 +  -7.5   -4.7497   AGAGTAAATACGTAG      GCCGGAT-AAGGCG TTCA CGCCACCATCCGGC       TTTTTAATGGGTGGC  83 213
        glnD NONE
        dapD 3725838 .. 3725853 + -11.8  -2.84878   AAGCGAGTGAAAAGC              GGGGGC GACA GCCCCC               CTTTGCATTACGGCG  80 39
A1D48_RS19130 3727780 .. 3727797 +  -5.6  -3.09452   AGCCGATCTGGACAA             GCTTAC CCGTAA GTAAGC              TGTGTGTTGCCGGAT  52 10
        mtnN NONE
        btuF NONE
A1D48_RS19160 3734743 .. 3734757 +  -5.6  -4.68994   CATCGGGTCAACCAC               CAGGCC AAC GCCCTG               TTTTTCGATGGTCAT  76 264
A1D48_RS19175 3737928 .. 3737955 +  -9.9  -5.96521   CCAAAAACAACGTAG       GCCGGGTAAGGCG AAGC CGCC--ACCCGGC        TTTTTTTTGGTTCAT 100 51
        thpR NONE
        sfsA 3758101 .. 3758112 +  -5.8  -4.25283   GTATTCTGGCCGCGT                GCGT AAAT ACGC                 TTTTCCTCACAGGGT  67 64
A1D48_RS19260 3758724 .. 3758741 + -12.7  -4.21772   ACCCTATTTATGACA             GGCGGGA GTTT TCCCGCC              TTATTCTTTATTGCC 100 55
      gluQRS NONE
        pcnB NONE
        folK NONE
        panB 3762630 .. 3762642 +  -9.1  -3.30124   ACCGTGCCGGATGGC                GACGC GAC GCGTC                TTATCCGGCCTACCG  71 49
        panC NONE
        panD 3764075 .. 3764114 + -10.2  -5.81412   GATTTTCAATAATAG  GACAACCC-TTCCAGAAAA ACA TATTTTGGGACGGGTTGTC  TTTTTTTTAAATCAC 100 39
A1D48_RS19295 3764975 .. 3764998 +   -11  -4.67641   AAAAAGATTAGCCAA          TCCCTCAGCG GCTG TGCTGGGGGA           TTTTAATTTTAAAGT  95 53
A1D48_RS19300 3765815 .. 3765833 + -14.6  -2.71745   TTACGTACCAATGTA             GTGGGCCA TTC TGGCCCAC             GTTAATTATTCGGAA  89 54
A1D48_RS19305 NONE
A1D48_RS19310 3769038 .. 3769055 +    -2  -2.71144   TCAGCCGTTGCGACT             TTCGTA TTTAGC TACGAG              TAATTAACGCAGATC  40 5
A1D48_RS19315 3769655 .. 3769669 +  -2.9  -3.60072   TAATTTTCAGGTGCT               TTGTT CATGC AACAA               TTACTGTTTCTTTTA  50 38
A1D48_RS19320 NONE
A1D48_RS19325 3771461 .. 3771479 +  -4.4  -3.79533   TCTCACCGTGGTGAC             CGCCAGAT GGA AACCGGCG             TCTTTTGCTGCTTTG  58 153
A1D48_RS19340 3773975 .. 3773996 + -11.5  -4.68209   ATATAACTGATCCTG           GCGGCCAGC GTCG GCTGGCCCC            TTTGTTTATTGAGGT 100 31
A1D48_RS19345 NONE
A1D48_RS19350 NONE
A1D48_RS19355 3778356 .. 3778369 +  -3.8  -3.27525   CTGGAGATTCAGATT               CGCT GAGAGA AGCG                TTGGGTTTCAGCAAG  48 20
A1D48_RS19370 3780953 .. 3780985 +  -8.4  -2.95459   AGCCATTAGCTATAG     GCCGGAT-AAGTCGC TTTA GCGACGCCATCCGGC      ATTTCTGCGCTTACT  65 40
A1D48_RS19380 3784136 .. 3784155 +   -15  -3.30124   CGAAATAACCATTAA            TGCCCGGC GTAT GCCGGGCA             TTGTGCCGGGTGGCG 100 33
A1D48_RS19390 3786393 .. 3786412 + -12.2  -3.71487   CTATTGCTGAAATAA            TGACCGTG CATC CACGGTCA             TTGTTAGCTATGATG  89 53
        speE NONE
        speD 3788124 .. 3788144 +  -6.1  -2.71731   CGCGAGATTTACTAC            GGCCGCA ATATTTC TGCGGTC            TGATTCACCACTGGC  53 2
A1D48_RS19430 3793471 .. 3793512 +  -2.9  -3.36492   ACCTTTTATTATGCG CCGGAAGA-GCGCAGTCATT AAA AACGGCTGCCCCTCATCCAG TTATAGCATTACCAG  46 157
A1D48_RS19435 3794232 .. 3794253 + -18.7  -3.09273   ATAAGAAGCGCCATT           CGGGCCCGG GAAT CCGGGCCCG            TCTCTGTTACACCGC 100 37
A1D48_RS19450 3797055 .. 3797069 +  -7.1  -3.36492   ACCGACCAAATTGTT               GAGCG ATTCC CGCTC               TTGTGGGGTTAGCAC  58 499
A1D48_RS19465 3799074 .. 3799095 + -11.5  -2.80077   TCTTCGCTGTAAAAA           CTGGCCCGG AAAT CCGGGCCAC            TCACTTTTATACCGC  77 29
A1D48_RS19480 NONE
A1D48_RS19485 3804656 .. 3804679 + -10.3  -2.67694   TGCCGGAATTGGCCG          CCCATACGC CTTCAT GCGTGTGGG           TGATCTGCTGATGCT  66 161
        aroP 3814202 .. 3814225 +   -16  -3.51924   GTGGCGTTACTTTTC          CGCCCTCCCC GTCC GGGGAGGGTG           TTATCTGCCTCACAG 100 43
A1D48_RS19520 NONE
A1D48_RS19525 3816873 .. 3816887 +  -3.4  -4.17701   TCTTCGCCATCGACA               CCGCCG CTT TGGGGG               TTTCTACTTTGTCAG  58 194
        nadC 3819201 .. 3819223 +   -17  -2.91582   CGCTGATCCTCTCCA           CCCGATGGCG CTG CGCCGTCGGG           TCTATAAATCACCTG 100 35
        ppdD NONE
        gspE NONE
        hofC 3822883 .. 3822899 +  -7.9  -3.05384   ATGCCGCCCAGGCCA              TGCGCCG CGT CAGCGCA              TTCGATAACCGCCGA  57 471
        coaE NONE
        zapD NONE
        yacG 3825516 .. 3825537 +  -2.8  -4.05714   GACCTGCCCCATCAC           GCGCGGCG GAGAGA CGCAACGC            TTTATCATTCACCAT  56 240
A1D48_RS19590 3827764 .. 3827781 + -12.7  -5.09685   TGCATCCATAAAAAA             GGCGCAG TCGC CTGCGCC              TTTTTATCTGTGTTC 100 475
        leuL 3855491 .. 3855508 + -14.1  -5.64274   CGAAGTCAAACAAAA             CCCGCGC CGTT GCGCGGG              TTTTTTTATGCCTGA 100 48
        leuA 3857112 .. 3857124 +  -3.3  -2.62263   AAATAAAGAGAACAA                CAAGG AAA CCGTG                TAATGTCGAAGAACT  42 10
        leuB NONE
        leuC NONE
        leuD 3860352 .. 3860370 +  -8.8  -5.30686   CTCATCAGTCGCTCA             TGCCGGGG ATA TTCCGGCA             TTTTTTATACGTCTT  95 140
A1D48_RS19740 3862572 .. 3862596 +  -7.2  -3.62518   ATAATGCCGGCGAAG          GGATTTGAGG CTACC TCTCAAGTCC          TTTGCCACTCTTTAA  67 151
A1D48_RS19745 NONE
        thiP NONE
        thiQ 3866366 .. 3866382 +  -6.5    -3.273   GGATCGTGAACATAC              TGTGCTG ATG CAGCGCG              TGTTCGGTTTTATCC  56 507
        araB 3869710 .. 3869720 +  -2.4  -3.48529   GACTCATTAAGGACA                 CGAC AAT GACG                 ATTTTTGATAATTAT  47 31
        araA 3871228 .. 3871247 +    -2  -2.72144   GTTAATTGGTGAAAC            GGATTGCC CGGC GGCACTGC             ATTTACCGGGCCTAC  40 36
        araD 3872066 .. 3872085 + -12.8  -3.20858   TAATGCCTCTAAAAA            CGCGTCCC ATGG GGGGCGCG             TTGATGAATCTGGTC  86 38
A1D48_RS19795 NONE
        polB 3876074 .. 3876103 +  -3.5  -2.66435   CCTGGACCTAATTAA       CGCCACTACCA CATTAGCC TGGTAGCGGGG        TCGTATACTCGCAAT  42 88
        rapA NONE
        rluA 3880070 .. 3880108 +  -8.7  -3.21747   GGCATCTTCCAGCGT  CGGACCGCGCTGCGCCTG CTGC CAGCCGCCGC-CGGACTG   TTGATGATAACCTCC  65 333
        lptD 3883306 .. 3883316 +  -8.2  -3.35813   GATTTACAACGTAAT                 CCGC ATT GCGG                 TTAATTGAAATGGAA  65 48
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH 3887693 .. 3887748 +  -3.3  -3.53811   TGCCTGATGGCGCTA CG-CTTATCAGGCCTACATCCG-GCTA CATC TGGCTCAAGAGTAGGCCGGATAAGGCG TTTCGCCGCCATCCG  50 49
A1D48_RS19885 3894853 .. 3894864 +  -7.2  -4.11371   AAATGCTATCACCAT                GGGC CCCT GCCC                 TTTTACCCCCTCTTG  74 408
A1D48_RS19930 NONE
        caiA 3903764 .. 3903797 + -13.1   -2.8294   TGATAAGACGCGGGG     CGTCGCCATCAGGCA ATCA TGCCGGATGGCGCTG      TGCTTATCCGGCCTA  85 58
        caiB 3905057 .. 3905103 +  -7.3   -3.6682   GGCCAAAGTTGAGGA TTAAACGCGATGCGCTAATCGG TTTT CCGGTTAGCGC-TCACGCCTGA TTTCAGTGGATAAAG  67 22
        caiC 3906678 .. 3906708 +    -6  -2.76418   AAAATCTGAAATAAA       CCTTCCGGCAGGAA TCC TTCCCGCCGGGAAA       CTATTTATCTGGAGA  53 27
        caiD 3907541 .. 3907583 + -13.6  -2.60496   CCGGATGGCGCTTCG CTTATCCGGCCTACAG CACATGCGCAA CCGTAGGCCGGATAAG GTGTTTACGCCGCCA  86 51
        caiE 3908439 .. 3908460 +  -5.1  -3.53224   TCAATCGGCGATAGA           GTTGAGAGT CGAT ACTCACGAC            TTTCACCAGACGCTG  55 243
        citN 3922016 .. 3922026 +  -2.4  -3.24232   TGATGGTGTAAAAAA                 ACGC ACG GCGG                 TGTCTTTGCCGCAAA  44 30
A1D48_RS20020 NONE
        oadA NONE
A1D48_RS20030 3925517 .. 3925539 + -12.1  -4.27192   CGATGTAATAGTGGA           TGGGATACG CATGT CGTATCCCA           TTTTCATCCAAATTT  95 33
A1D48_RS20035 NONE
A1D48_RS20040 3928092 .. 3928102 +  -5.4   -3.0464   TATCCACCACCGTGG                 TACC GGC GGTA                 TATTGCCCCTGCGTT  50 166
        rpsT 3936809 .. 3936823 +  -8.5  -5.64274   AGCTTTGTAGAAAAA               CCCGC GTAAA GCGGG               TTTTTTTATGCCTGC 100 57
A1D48_RS20090 3938637 .. 3938650 +  -3.8  -2.91276   CCCTCGAATATGGGA               GGCA CCACCA TGCC                ATTTATGCAACAAGA  46 56
A1D48_RS20095 3940690 .. 3940722 + -15.6  -3.06492   TGAACTTGTAGAATG      ATTCCGGCTGCGGG CTAGT TCCGCAGCCGGAAG      TATTACGGTAGGTAC  93 30
A1D48_RS20130 3950320 .. 3950352 +  -9.2  -4.74052   TTACTTAATTTCCCC      GGTTTGTAGTCGTG AATGA CACGACTACAGGCA      TTGTTTTTCTTTAAT  90 63
A1D48_RS20135 3951960 .. 3951990 + -16.3  -2.87274   GCAAATAAGCCATAA       TGTTATGCGGTCG ATAAC CGGCCGCATAACA       TACTTAGTTATGCAA 100 33
A1D48_RS20145 3954765 .. 3954782 +  -2.7  -5.16472   AAAAAGAAAGGTCGA             CTGAAAT GTTG ATATCAG              TTTTTTGGCATTTTT  79 114
A1D48_RS20155 3956814 .. 3956825 +  -2.2  -3.72588   TCCCATAAAATGAAT                CTGA GCGG TCGG                 TTTCGCTGTCCCTTC  50 332
A1D48_RS20220 NONE
A1D48_RS20225 NONE
A1D48_RS20250 3978211 .. 3978225 +  -2.8  -3.70022   GACTTAAAGTCATTG               GCGA CGATTAA TCGC               TGTTATTTCTATTCC  50 15
        msyB 3978982 .. 3979005 +  -8.2  -3.69395   GTGAATGCCCTCACT          GGGGGAAA TATTTTCT TTTCCCCC           TTATTAGATCATAGA  69 37
        satP 3979691 .. 3979723 +  -7.7  -2.66559   AGGCGCACTAAATCT      CTTTTATTCCTCCCG CAC CGGGAGGAATAACCC      TACTATCAGTCTCTT  59 30
A1D48_RS20275 3983133 .. 3983155 +  -4.2  -3.05463   TCAACTCTGCGGCGT           TTTTTTGCTA AAG TCGCAGAAAA           TTCCCTGCAAGGACT  47 62
        yaaA 3984002 .. 3984041 +  -9.3  -3.62775   CAAATCGACACCACC CCATAG-GCCCGGTAAGCG ACAG CGCC-ACCGGGCGCAATGG  TTATTGGCGGGTCAT  75 79
        arcA 3991152 .. 3991178 + -13.1  -4.38927   GCCAAACCGTAAAAA         CAGCCGGTAAG TTATT CTTACTGGCTG         TTTCTTATGTCCCCC 100 53
A1D48_RS20320 3991732 .. 3991777 +    -6  -4.70046   TCCCGCCGGGAGGAG TTCCGGCAGGCGGCG-ATTGC GCTCA GTAAAACGCCGCCCGCCTGCA TTTTGTACTTTTCTC  78 52
A1D48_RS20325 3993032 .. 3993048 +  -5.3  -4.56358   GAAGCGCATACAGAG              TAAAATA TAA TATTTTA              TTTTATATGGCTATC  71 296
A1D48_RS20330 NONE
A1D48_RS20335 3994377 .. 3994393 +  -5.8  -2.59742   TATGGGATGAGTTTA              GAGCCG CATTC CGGTTC              ATTCTAGCCATTAAC  50 2
A1D48_RS20340 3996966 .. 3996982 +  -2.1  -2.64747   GGCGTAGAAATCTTA              CACGAGC AAT GCCAGTG              ATTCTGGTGGGATAA  39 8
A1D48_RS20345 3997574 .. 3997590 +  -2.2  -2.65504   CATCTTTCTATTTCA              CCTGGT ATAAA AGCAGG              AATTTTTCATGAGAA  39 41
A1D48_RS20350 3998699 .. 3998735 +  -8.6  -3.41807   ACGGCATCACATTTT   CTGGCGCTGCGCGGGAA AACG TTAACGCGC-GCGCCCG    TTAGATTTATTTCCA  69 40
        robA 4004263 .. 4004293 +    -6  -4.37886   AGGTGATATCACACC       CGCACGCCTGGG CGATAAT CTCCGCCGTGCG       TTTTGTGCGGCCTAA  73 459
        yjjX 4005091 .. 4005118 +    -9  -3.30124   CATCAGGCATTTCGC        GGCGATGTTGCC AGAT GGCCGCTTCGCC         TTATCCGGCCTACGA  71 79
        ettA 4009413 .. 4009445 +   -12  -2.74443   GTTGTGAAACTGTAG      GCCTGATAAGACGC GGTAA GCGTCGCATCAGGC      ATTGATTCTTATCCC  79 102
A1D48_RS20435 NONE
        lplA 4015251 .. 4015278 +  -4.2  -5.06414   CAGCGAATTATAAAC        CATTTATCATCA CCAA TGATGATTAAAG         TTTTTCTTAAGCAAG  76 194
A1D48_RS20450 NONE
A1D48_RS20455 NONE
A1D48_RS20460 NONE
A1D48_RS20465 NONE
A1D48_RS20470 4020598 .. 4020629 + -10.1  -2.58491   GCTGACGAAATAAAC      GATGAAGGGGGCC TGCTCT GGCCCCCTTCACA       ATCTTACTCTTTATC  70 28
A1D48_RS20495 NONE
        yjjW 4028063 .. 4028079 +  -7.9   -3.6682   GCACCACGCCGGTTC              GCGGCAG CTC CTGGCGC              TTTAAGTGCATCGCC  65 381
        rsmC 4035402 .. 4035414 +  -9.1  -3.30243   CATGTGCCGGATGGC                GACGC CAG GCGTC                TTATCCAACCTACGT  71 72
A1D48_RS20550 NONE
A1D48_RS20555 NONE
A1D48_RS20560 4036166 .. 4036177 +    -3  -3.92414   GATAATGATAACTAA                TATC ATAT GATA                 TATTTTCTCATTTGT  54 327
A1D48_RS20570 4037523 .. 4037533 +    -4  -2.76885   TATCGCTATCGATAG                 GATT AGC AATC                 ATTATCATTTAGATT  45 101
        fhuF NONE
A1D48_RS20580 4039451 .. 4039477 +  -6.4  -3.28745   ATTTATCGCCAGTTC         CGTCAGGCTGGA TAA TCCTGTCCGGCG         TTCAGTTCTTAACGC  59 520
A1D48_RS20595 NONE
A1D48_RS20600 4042323 .. 4042336 +  -3.7  -2.85545   CCCCCGCGTGTGAAT               GGTGG AACG CCTCC                TGCTGTTCTTACAGG  46 28
        dnaT NONE
        dnaC NONE
A1D48_RS20615 4044418 .. 4044432 +  -4.2  -3.20751   GTTATTAGAATTGCA               GCAATG TGA CATCGC               TATTACATTGTTAGA  48 232
        opgB 4046910 .. 4046937 +  -7.6  -3.03124   AGTGTGAACATCTCA        TCCGGCCTACGG TCAT CTGTAGGCCGAC         TGTTCACCACTAAGC  60 150
        btsT 4051175 .. 4051203 +  -7.5   -4.3255   TCCCGGCTAGTGTAG       GCCGGATAAGGCG CAAGC CGCC--ATCCGGC       TTTATTCATTAACAG  77 67
A1D48_RS20635 4051407 .. 4051427 +  -3.2  -3.14344   TTACGGCGGCGATGG            CAAAGGCG GTATG CGCTGTTG            TTAATGGAGAGACTA  46 1
A1D48_RS20640 NONE
A1D48_RS20645 4053274 .. 4053293 +  -7.9  -3.25823   GCAGGTATAGGCTGA            CCTCAGT ATCATC ACTGAGG             TTACTATGGAACAGG  64 48
A1D48_RS20650 4054073 .. 4054088 +  -4.6  -4.35483   CCAGAAACCAATAAA              GCGACT AAAT AGCCGC               TTTATTCTCATCACC  66 158
A1D48_RS20655 4055292 .. 4055328 +    -6  -4.30809   CAGGATATCCGCCTA   CTGGAGAGGTTAAGATA AGAT TATCC-AGCCTTTCCAG    TTTTACTGACTCTTA  73 46
A1D48_RS20665 4055942 .. 4055970 +  -3.8  -3.35046   GGCCGTAGTGGGAAT        CGTTGGCGAG TTTTACCGC CTCGTCATCG        TCTTTCACCACATAC  49 345
        mdtM 4059944 .. 4059977 +  -4.5  -2.73364   CCGCTGAGAAGTAAA     CACTCTGCCGGATAG AGGC TTATCCGGCACAGGA      TCATCTGATGTTTTT  47 27
A1D48_RS20685 4061344 .. 4061360 +  -9.5  -2.72144   ACCCCGCACATGGGA              GGCATTA ATT TAATGCC              ATTTCCCACCGATGC  69 69
A1D48_RS20690 4062916 .. 4062948 + -10.6  -3.14344   TGGCTACGGATTACC     CGGCCCATCTATGGGC CTC GCCC-T-GACGGGCCG     TTGCTCACCCCAGTC  78 248
A1D48_RS20695 NONE
A1D48_RS20700 NONE
A1D48_RS20705 4065897 .. 4065911 +  -2.8  -3.28712   CCGCTAGTTTCAGGC               TGCC CCATCAC GGCA               TTCTGAAAGAGGACG  46 44
        hypT 4067115 .. 4067143 +  -8.2  -4.37658   AATAAGACTATCGAT       TTGCGGCAGC-AGC AGC GCTTGC-GCCGCAG       TTTTATCGCCACGTT  81 235
        trpS 4070262 .. 4070283 +  -4.3   -3.7642   CAGGTGCTGCCACAT           CGCCAGC TTCGCTGC GCGGGCG            TCTTTCTTAATTAAC  55 143
A1D48_RS20745 4072126 .. 4072136 +  -8.2  -3.66178   TGCGCCAGCATGAGA                 GGCG TTC CGCC                 TTTAGGATTGCCAAA  68 209
A1D48_RS20775 NONE
A1D48_RS20780 4076873 .. 4076902 + -10.2  -2.75343   CGATAACGTGAAGCA       GGAGGTATAGCCT ACAAG AGG-TATACCTCC       GTTTAAAAGTATGCA  71 35
A1D48_RS20790 4078147 .. 4078181 + -13.9  -3.89501   ACCTCTAATTATAAA     TTAAACAAATCTGTC TCTAT GGCAGATTTGTTTAA     TTTATAAAGCTGTTA 100 33
A1D48_RS20805 NONE
A1D48_RS20810 NONE
        dnaB NONE
A1D48_RS20820 NONE
A1D48_RS20825 NONE
A1D48_RS20830 4085822 .. 4085835 +  -4.5  -4.62471   TTTTTGATGTTTTTA               CAGCT TGTA GGCTG                TTTTTAGACATTACA  71 238
A1D48_RS20835 4086874 .. 4086889 + -10.4   -3.5361   GCATCACAAAAAAAA              CCTCGC TAAA GCGAGG               TTCTGTGCATAATTA  77 342
A1D48_RS20865 NONE
A1D48_RS20870 4098352 .. 4098406 + -14.9  -2.83903   ACGCTCCTGTTCAGG ATCATTCCGGGCGGATAGCCAGGCG ACAGC CGTCTCGCTATCCGCCCGGACCGCC TGCATTTTTCCGGCG  89 164
A1D48_RS20875 4099206 .. 4099224 + -11.7  -5.52384   CTGAATCTTTATCGT             GACGCCC ACTCC GGGCGTC             TTTTTTTCATCACCG 100 37
A1D48_RS20885 NONE
A1D48_RS20890 NONE
A1D48_RS20895 NONE
A1D48_RS20900 NONE
        traD NONE
A1D48_RS20910 NONE
A1D48_RS20915 NONE
A1D48_RS20920 4105832 .. 4105863 +  -9.4  -2.64616   ATAATATTTTATAGA      GTCATCCTGCAAAC GAAT GCCTGCGGGATGAC       TCATATGACTACAAA  68 75
A1D48_RS20925 NONE
A1D48_RS20930 NONE
A1D48_RS20935 NONE
A1D48_RS20940 NONE
A1D48_RS20945 NONE
A1D48_RS20950 NONE
A1D48_RS20955 NONE
A1D48_RS20960 4110234 .. 4110247 +  -2.3  -2.82516   CGCCCTGCCCGGCGA               GCGAA CCGA TCCGC                TGTGATGATGCGCAG  40 7
A1D48_RS20965 4112915 .. 4112925 +  -4.6  -3.75581   TGATTGAGTGGGCAG                 CTCG AAT CGGG                 TATTGTTTTATCCAA  58 34
A1D48_RS20970 4115000 .. 4115011 +  -4.4   -5.1101   TGATTAATCTTGTAC                GCTA CATG TAGC                 TTTTTTCCATGATAC  80 414
A1D48_RS20995 4118351 .. 4118365 +  -2.7  -3.54029   CCGAAAAATCCGCTC               CCCGC CAGGT GCAGG               TTATGATTACTCCAG  48 5
A1D48_RS21000 4119154 .. 4119172 +  -2.4  -2.85585   TCCAGAACAAATCGT             TTCATCTG GGT CAAATGAG             TGATATATTTTCACC  41 74
A1D48_RS21005 4120904 .. 4120919 +  -5.4  -4.72272   AATATCTGCCGCCAG              CGATCT TTAC AGGTCG               TTTTTACTGCCAACA  76 296
A1D48_RS21035 4126237 .. 4126270 + -11.9   -2.6737   AATTATAGATAAGAT     ATTCATAATGGCCAG AGTA TTGGCCATTATGAAA      TAAATTATATTAATT  79 97
A1D48_RS21055 4133991 .. 4134027 +  -9.4  -3.76224   CCTCTACCCCACCAT   GCAGGGAATC-CCTCCC TGCC GGGCGGTGTTTCTCTGC    TTTCATCACTGGAGA  79 340
A1D48_RS21060 4134385 .. 4134403 +    -8  -2.84693   CCGGGCGACTCCCGA             CCGGGAGC GCT GTACCCGG             CTTCTTAATCATGAG  61 68
A1D48_RS21065 4135321 .. 4135340 +  -7.2  -3.21099   ACGGGCGCAGCAACC            GTTA-GCGC TGA GCGCATAAC            TTCATCATGCCGACA  62 7
A1D48_RS21070 4136039 .. 4136060 +  -2.9  -3.66356   GTAACGGGCTTACCC           GAAAAAGGG GCTT CCCTTCGTC            TTTCGAGTTGCAGGT  50 164
A1D48_RS21090 4139898 .. 4139931 +  -6.1  -2.87132   CTTCTGACCGCCTGA     CTCAGCGCTTT GACAATGATCAG GAAGCGCTGAG      TGTCTGACGAAAAGC  55 34
A1D48_RS21100 NONE
        idnO 4142500 .. 4142517 + -12.7   -3.6581   CCAGGGAAATGCGAC             GCAGCGC GTAA GCGCTGC              TATTTTGGCGCTAAT  95 41
        idnT 4143850 .. 4143861 +  -2.2  -3.41693   CGTACTGGCGCTGAA                TGCG GTTC TGCA                 TTAATTCATCATCCG  45 10
A1D48_RS21115 4144905 .. 4144928 +  -2.5  -5.07053   ATTTGGGTTATCAGA          TTTATCACG GCAGCA CGTTATAAA           TTTTTTGAACTACTT  73 3
        pepA 4149253 .. 4149264 +  -7.2  -4.09685   AAGGCGCATTAGCGC                CGCC ATCA GGCG                 TTTTGCCGGATGGCG  72 67
        holC NONE
A1D48_RS21150 4152760 .. 4152779 +   -15  -4.66609   ACAACATGAATTATG            GGCCGACG TAAA CGTCGGCC             TTTTTACATCAGATA 100 139
A1D48_RS21160 4154720 .. 4154760 +  -8.6  -3.61894   TTATTTTTGCTGATA TAAGTAAT-CCCGGA-AACA TCC TGTTATCCGGGAATCACTTA TTATTCAAGGAAGTT  72 72
A1D48_RS21165 4155360 .. 4155377 +  -8.4  -3.72576   GAGTGAGTTCTTTTT             GCCTGC CGCAGT GCAGGC              TTTACTCAGGACAGA  75 117
        argF 4158089 .. 4158107 +  -5.2  -4.46212   AACACCACAAAGTCA             CCTTCGTT CAG GACGACGG             TTTTCTCGTCGACGC  70 202
        arcA NONE
        arcC 4161293 .. 4161305 + -10.5  -3.63515   GGCTTTTTACCGGAT                GGCGG CTT CCGCC                TTATTCGGCCTACAG  78 41
        argF 4162400 .. 4162428 + -13.2  -2.62184   GGCGACTAATCCCAC        AGGATATGCGCC CTCGC GGCGCATATCCG        TGATATCAGGAGAGA  84 32
A1D48_RS21215 4163863 .. 4163873 +  -4.6  -3.28791   TGTAACGAGCCAGAT                 GGCG ACG CGTC                 TTATCCGACAGGACT  52 36
A1D48_RS21220 NONE
        pyrL 4164707 .. 4164724 + -12.7  -5.75342   GAAAACCAATACCAA             GCCCCTC AATT GAGGGGC              TTTTTTTTGCCCAGG 100 13
        pyrB NONE
        pyrI 4166157 .. 4166174 +  -3.4  -3.32844   ATAATGTGGTGCTGG             CCAACT AATTTG GGTTGG              TTATGAGATCCCGGC  48 18
A1D48_RS21245 4166616 .. 4166636 +  -8.9  -2.57132   ATTGAAGCGATCGCT            GTTCGTCGC TAA GCGCCGGAC            GTTATCCCCGCCGGG  66 14
A1D48_RS21250 4167459 .. 4167469 +  -2.4  -3.64703   CGCCATCAGCGGCCA                 GGCG GCG CGAC                 TTTGAATAAACGGCA  50 336
        treR 4171355 .. 4171368 +  -2.3  -4.56775   ATCGTCGCAGCGTTT               CGGGA ACGT TCCCA                TTTTTAAACCAACGT  61 77
        treB 4172865 .. 4172877 +  -3.3  -3.05384   AATTGTCTAATACTT                CTTCG GGG CGCAG                TTGCGTCCCAACGCA  45 31
        treC 4174585 .. 4174615 +  -3.9  -3.16921   CCTTATACGGATAAA       CGCCACAAACC TATTGACAC GGGCTGTGGCG       TTGCTCCAGGTTACT  48 49
        nrdD 4177171 .. 4177209 +  -8.9  -3.00946   CATCAGGCATCACAA  TGT-TGCCGGATGCGGTG CAAG CACCTTATCCGGCCTACA   TGCTTTCTGGACACC  68 88
        nrdG 4178053 .. 4178071 +  -7.4   -4.1899   ATCAGTGCATCTTCA             CTGTCGCT AAG AGTGACGG             TTTTCACTGGCATGC  74 385
A1D48_RS21355 4188557 .. 4188584 +  -7.6  -5.14563   AATGTACGTATTGTA        GGCCCGGTAAGCG CAG CGCC-ACCGGGCA        TTTTTTACTCCACAA  86 100
A1D48_RS21365 4191165 .. 4191200 + -13.3  -3.23274   CGGAATAACGCATGA    AGCCGCCATTGGGCA ATAACA TGTCCGATGGCGGCG     TTGCCTTATCAGGCC  91 55
A1D48_RS21370 4191922 .. 4191943 + -10.9  -5.11063   AATCGTCAAGATAAA           GGCTCTCAT AGTA ATGAGGGCC            TTTTTATTGGCTAAT 100 55
A1D48_RS21375 NONE
A1D48_RS21380 4194699 .. 4194716 + -12.7  -3.14878   AATGTAAAAAAACAA             CGCCACC CGAG GGTGGCG              TGTTCAGTTCAGGGC  86 54
        msrA 4201522 .. 4201543 +  -5.1  -4.41895   CTAGCCCTGAACTTA           TCGGCTC ACTGCTAC GAGCCGG            TTTTCATTAAACGTT  68 115
A1D48_RS21405 4202982 .. 4203002 + -16.9  -6.11019   TGCCAGAAACATCAA            CGGCTCCTG ATT CAGGAGCCG            TTTTTTTTACTTTTT 100 49
A1D48_RS21420 4204296 .. 4204313 +  -5.5  -3.53012   AAGCTGCGCCTGGCC             TTCCGCC ACAA GGCAGAA              TTTCAGCGAGGAACC  55 189
A1D48_RS21435 4207087 .. 4207140 + -19.3  -2.78816   AACGTGTGTCCCGTA TGGC-GCT-GCG-TTTATTCGGCCTG ACTGG CAGGCCGAATAAAGCGCTAGCCGCCA TCTGATAAACGCTCC 100 39
A1D48_RS21445 NONE
A1D48_RS21450 4209477 .. 4209496 +  -7.8  -2.98493   CGGAAAAAGCGACCG            TCGTTCCG GTCA CGGAACGC             TAATTTCATACTCGC  62 3
        ytfE 4210763 .. 4210786 +  -4.6  -4.07568   TTTCGCCGGTACCGC          GCGTTTCGATA GCT TAGCG-AACGC          TTTTGGCGCCACGCC  62 524
A1D48_RS21475 4213597 .. 4213618 + -10.2  -3.61398   TACCCTATTCGTTCA           GGTGAAGC ATTACC GCTTCACC            TTATTCACCCACCAA  78 66
A1D48_RS21505 4216804 .. 4216823 + -13.6  -5.87688   AAAATGCCATAGTTT            TGCCCCCT GGTC AGGGGGCA             TTTTTTTTCGCTTAT 100 48
        ulaG 4223324 .. 4223341 + -12.7  -5.22943   TGTGAGTCGATATCA             TGCCGGG ATTA CCCGGCA              TTTTTTCCATTTACT 100 36
        ulaR 4224289 .. 4224306 +  -3.3  -3.64703   TCGCCCCGGCGAGTG             CCTGCTG GAGC CGGAAGG              TTTCGATAGCAGGCA  51 141
        bsmA 4225441 .. 4225453 +  -2.7    -3.192   TCAATAACAGTAGAT                TGATT TTT AGTCA                GTTTTACATTGCTTT  45 34
A1D48_RS21565 4226159 .. 4226182 +  -3.1  -4.36914   CGCAAAAGCTTCACT          CAATACGTC ATAGAC GCCGTGTTG           TTTTGTCAGCACCCG  62 346
        queG 4250366 .. 4250380 +  -8.6  -3.76413   TGCGATTGGTGGTCT               GTGCTT AAC AAGCAC               TTTCAAATTTTGGAG  75 502
A1D48_RS21700 4251613 .. 4251647 + -11.5  -3.04144   CAGTGGCGGGAGAGC    TGCCGGAT-GAGACGC TCTG GCGTTGCCATCCGGCA     TGTTACGCCTCACAG  79 43
        rsgA NONE
         psd NONE
        mscM 4257746 .. 4257759 +  -3.7  -3.86015   GCGGGTAAAACCAGC               CGCCC GGCG GGGAG                TTTGTAAACGCAATG  55 5
        frdA NONE
A1D48_RS21745 NONE
        frdC NONE
        frdD 4264531 .. 4264559 + -17.6  -5.83211   TCTAAGTTGCCACGA        CGCCCTCTTATC TACCC GATAAGAGGGCG        TTTTTTCTTTTCCTG 100 36
A1D48_RS21760 4265325 .. 4265344 +  -3.4   -4.4078   GGTCCAGATGGCGTA            CGCCGTTC CAAC GGGCAGCG             TTTTCATTGCCCAGG  64 186
A1D48_RS21770 4266781 .. 4266802 + -10.1  -4.59773   GCGCGAAAAATAGGA           TGGCGCAGC ATAC GCTGCACCA            TTTTTCCCGATAACG  91 464
        epmB 4268608 .. 4268626 +  -4.4  -2.76291   ATAAAGTCCGTTTTA             GGACTCGC TTA GCGTGTAC             TGCATTTTCGAATTA  47 176
A1D48_RS21800 4270074 .. 4270097 + -13.8  -4.00066   TGACTAAAAGAAAAA          CCCCCGGTCA TTTC TGCCCGGGGG           TTTCTCAATTCTGGG 100 504
        yjeH 4274057 .. 4274082 +  -2.5   -5.4833   ACTCTTAATCATTTC         T-GCCGCCGG GCTCTCA CCGGCCGCCA         TTTTTTGTTGCATCA  85 351
        aspA 4276066 .. 4276086 + -15.5   -5.4505   GGGTAGTACCAAAGA            GGCACGTCA CGA TGACGTGCC            TTTTTTCTTACAAGA 100 48
A1D48_RS21835 4277470 .. 4277492 + -14.8  -3.30635   TGTAAGTGTTTCACC           CGCGGGGCGT ATC ACGCCCCGCA           TTCTCCCGCCCTTTG 100 36
        cutA NONE
A1D48_RS21845 NONE
A1D48_RS21850 NONE
A1D48_RS21855 4280423 .. 4280439 + -13.7   -5.1417   CACTTATTCAGAAAA              CCCAGCC TAT GGCTGGG              TTTTTGCTTTTCTGG 100 39
A1D48_RS21870 4284207 .. 4284217 +  -3.2  -5.06414   CGGCTTCCACTAATG                 CACT ATA GGTG                 TTTTTATTACAAGAG  76 189
A1D48_RS21920 4292313 .. 4292356 +  -4.2  -3.28712   ATTAAAATTGTGTAA TTGCCTGTTTTTGATATGTT CACTCC AACA-A-CAGAGACAGGCAA TTATGGACGAAAAGA  50 122
A1D48_RS21945 4296258 .. 4296283 +  -2.7   -4.8048   ATAGCTATATATTAG         TTTTTTTGAAA TATT TTTCAGAATAA          TTTTTGATATACACG  68 224
A1D48_RS21950 NONE
A1D48_RS21955 4297804 .. 4297816 +  -4.7  -2.64735   ATAATAGTGATATCG                GCGCC GGA GGCGA                TAATATCACTAACAT  46 347
A1D48_RS21970 4298535 .. 4298556 +    -3   -2.6927   TTCATTATCCATGGC           TATCCCTT CTGGTT GGGGGATA            TCGTCTCTGAGCCCT  40 404
A1D48_RS21980 4301368 .. 4301381 +  -2.4  -3.04263   TACAGGCCAATAGCA               TCAG GCCAAA CTGA                TCTTCCGGCTCGCGT  42 333
        dcuS NONE
        dcuR 4308525 .. 4308539 + -11.4  -4.98531   TATTTTCTATTATTA               CAGCGC TCT GCGCTG               TTTTTAATTTCAAAA 100 181
A1D48_RS22015 4308985 .. 4308998 +  -3.1  -3.20616   CTTAATCGTTAATCG               T-CGCC ACT GGCGCA               TTGAATATTCGTCAT  46 58
A1D48_RS22020 4310443 .. 4310459 +  -9.3  -3.28712   GGATTCCTGTAATGG              CCGCGCG CGC CGCCCGG              TTATGCGCGGCGCGC  71 29
A1D48_RS22025 4312226 .. 4312251 + -11.9  -3.30124   CGTTATCGGTTAATT         GCCGGATG-GCG CTA CGCTTATCCGGC         TTATCCGGCCTGCAC  85 70
        melR 4316493 .. 4316522 +  -6.5  -3.14344   ACTTTACACCCCCTA       TTTGACG-GGGTAA TAC TTGCCCACGTCACA       TTCATACGGCGGGTC  57 169
        adiA 4318929 .. 4318948 + -12.1  -5.60993   CTGTCATACCTTTTT            GCGCGGG CCCCAT CCCGCGC             TTTTTTTATACAAAA 100 105
A1D48_RS22050 NONE
        adiC 4321457 .. 4321471 +  -2.9  -4.61873   TCCAACATTAAGTTC               TTAAG GTTCA CTTAA               TTTTACTTTGTCACG  65 97
        eptA NONE
        pmrA NONE
        pmrB 4325225 .. 4325235 +  -8.2  -4.08064   ATGTCCGACGCCGCT                 GGCG TTG CGCC                 TTTTAACGGACGATT  77 343
A1D48_RS22085 NONE
        yjdN NONE
        phnO 4328636 .. 4328647 +  -3.6  -2.94232   TGGATAAAGGTTAAA                CGGG CTGA CTCG                 CTTCTTTAGCAAAAA  44 133
        lpxO 4329698 .. 4329731 + -22.5  -3.55219   AGCCTCCTCTGAAGC     CGGGCCGCGGTATGGC ACT GCC-TGCCGCGGCCCG     TTCTATCCTGGCGTT 100 29
A1D48_RS22105 4332305 .. 4332324 + -13.6  -5.64274   GCATTTTCCCTATAA            CAGCCTCC GCCC GGAGGCTG             TTTTTTTATCCATAC 100 123
A1D48_RS22110 4333267 .. 4333284 +  -4.1   -5.0538   TTTGCCCAGCACATC             GCGCT CATAGGCC AGCGC              TTTTTTGCGGTCAAA  77 219
         acs 4344018 .. 4344033 +  -3.2  -2.80816   CGAAAGACGCAGGGG              GACCTC TGGA GAGCTC               TGTGATGAATGACCA  43 251
A1D48_RS22165 NONE
        actP NONE
A1D48_RS22185 4348268 .. 4348288 +  -4.7   -4.0162   GGTCGTGCAGCAGCT            TTTGCAATG TTT CATTGCTGA            TTTCTCGTGTGGCGC  60 173
        soxS 4353543 .. 4353570 + -11.2  -4.30719   CGCCTGTAGGGCGTC        TGCCCGCGTATC GTCA GAGGCGCGGGCG         TTTGTTGTAGCCAGG  93 32
A1D48_RS22230 4356176 .. 4356196 + -11.2   -5.4505   TTAAATGACAAAAAA            GACCCGTT TGTGC AACGGGTC            TTTTTTATTAAGCAG 100 233
A1D48_RS22270 4380955 .. 4380981 +  -5.9  -3.12668   CTGGCCACTCTGATC        GGTCCACTTGCG GGTA CGCAATTG-ACC         TTCGATATACACCTG  52 302
        uvrA 4384301 .. 4384336 +  -9.7  -4.79223   ATGCTCAAATAACCT    TCACGCCGCTTTCCG ATTCGC CGGGAAGCGGCATCA     TTTTTCCTCATCTCA  91 29
A1D48_RS22290 NONE
A1D48_RS22295 4385398 .. 4385412 +  -4.2  -4.07885   GACGTAACAACTCTG               CCAGTT CCG GGCTGG               TTTTGAGAGAGGCTG  62 214
A1D48_RS22335 4391980 .. 4392010 +  -5.6  -5.80364   TAATAGCTCTGCAAA      GAAATTGGGCTTCC ACCCG GGAAGCCC--TTTC      TTTTTTTGTTCGGCT 100 38
         zur 4395822 .. 4395848 +  -5.3  -2.94422   ATATTACCAGCGATA        GTTGTT-AC-GGG TTT CCCAGTCAACAAC        CTCTTTTTCCGCCTG  50 137
A1D48_RS22385 4401739 .. 4401749 +  -6.8  -2.78596   ATCTCTGTCGACCAT                 CGCA TAT TGCG                 TATCGTAAGCCACTG  52 433
        malE 4408208 .. 4408219 +  -5.8  -3.30124   CCTGTGCCGGATGGC                GGCA TAAA TGCC                 TTATCCGGCCTACAA  56 50
        malF NONE
        malG 4410845 .. 4410860 + -10.4  -5.66684   TATGGTCGTATTTTG              GCGCTC TTCG GAGCGC               TTTTTTTATGCGTTA 100 106
        lysC 4419438 .. 4419450 +  -4.8  -4.13767   CATTCTGTCAGCAAT                TGCC TGACC GGCA                TTTTCGGCTGACGCG  62 375
A1D48_RS22470 NONE
A1D48_RS22475 4421017 .. 4421029 +  -4.8  -2.63723   TTATTTGCAATGGGG                GCAG GCTAG CTGC                ATTCATTAATCAGAG  48 4
A1D48_RS22480 4421363 .. 4421401 + -12.7  -4.75954   CAACGAGGTAACCAT  TAAACAAATCCCCGTCGT TTAT ACGCCGGGGATTT-TTTA   TTTGTTTTAACTTTT 100 23
A1D48_RS22485 NONE
A1D48_RS22490 NONE
A1D48_RS22495 NONE
A1D48_RS22500 4424120 .. 4424139 + -13.6  -3.53091   TTGGCGGTTAATTAC            TTCGGGGC TACG GCCCCGAA             TTTAACACGACGAAT 100 30
A1D48_RS22505 NONE
A1D48_RS22510 4424560 .. 4424582 + -12.7  -3.72576   TAAACACGAATACGA           CTCGCAGGC TTAAT GCCTGCGGG           TTTCCTGACCCAAGC 100 13
A1D48_RS22515 4427029 .. 4427044 +  -2.6  -3.02144   ACGGCGCCGGGAGTA              C-GCATA ATG TATGCCG              TATTAGGCGAAATAG  43 19
A1D48_RS22520 NONE
A1D48_RS22525 NONE
A1D48_RS22530 NONE
A1D48_RS22535 4430134 .. 4430146 +  -6.3  -3.14839   TGAAAATGTAATCAC                TTTGC GCT GCAAA                TATTGCATATATGTA  57 199
A1D48_RS22540 4430644 .. 4430657 +  -3.9  -2.56343   TGTTTTCAGGAATGA               GAAAT GAAA ATTTC                ATTAGTGGTTCCCGT  44 19
A1D48_RS22545 NONE
A1D48_RS22550 4433099 .. 4433117 +  -4.7  -4.36595   TTCTGTAGGCAAAGG             TGAAATT ACAGC AATTTCA             TTTTAACTTTACGTA  66 1
A1D48_RS22555 NONE
A1D48_RS22560 NONE
A1D48_RS22565 NONE
A1D48_RS22570 NONE
A1D48_RS22575 NONE
A1D48_RS22580 4438262 .. 4438279 +  -2.7  -5.24796   TACTGGCGGCATGAG             ATCATTC TCAG GAATGAA              TTTTTATTATATCGA  76 306
A1D48_RS22590 4439524 .. 4439537 +  -3.7  -2.52896   AATACGGTAGCGTAA               GCGCC ATCG GGCGA                TGCGTTGCCGGATGG  44 102
        panS NONE
A1D48_RS22600 4441012 .. 4441025 +  -2.3  -4.60258   ACGCCGACGCGCGGC               AGACG TTAA CGTCC                TTTCTTCTTTCGTCC  64 17
        pepE 4443387 .. 4443438 + -18.8  -3.79043   CCAGGCCACATTGAA TGCCGAATGGC-GGGCCTACGCGCA TGT TCTCCGTAGGCCCCGCCATCCGGCA TTTCACTTAATACTC 100 43
        iclR NONE
A1D48_RS22640 4450826 .. 4450841 +  -4.7  -2.63112   GCTGGCGGAATATCG              CGGAA ATTCAC TTCCG               TCATGTAGCAAATTT  44 278
A1D48_RS22665 4457239 .. 4457274 + -16.2  -3.55447   ACAGTTACCACACAC    GCAAAGAAGCCCGTCC AGAC GGACGGGCTTCTTCAC     TTGTCTGATGCCTGG 100 145
        purH NONE
        purD 4466128 .. 4466155 + -10.4  -5.00616   GTAATGCCCAATTGA        CGGGCGGCTTCG GTTT TGTTGCCGCCCG         TTTTTTCCAGCGCAG 100 71
        zraP 4469527 .. 4469550 + -12.4  -3.08679   GGTAAAGCATGTTTG          CCGAATGGCG GCTT CGCCATCCGG           TATTCCATCAAAAGG  83 36
A1D48_RS22745 4474524 .. 4474546 +  -6.8  -3.75378   ACAGGTAGTTTACTT           CAGCCCCCTC TTC GGAGGGGCAG           TTATCTTGTCGGAGT  66 55
        thiC 4476748 .. 4476763 +  -3.2  -2.90615   CTCAAACGGGAGGAA              GCCTGA TGTA TCAGCC               TGATTTCCCCACCGT  44 20
        thiE NONE
A1D48_RS22760 NONE
        thiS NONE
A1D48_RS22770 NONE
        thiH 4480275 .. 4480298 +  -8.8  -5.72616   ACGTAATGTGAAAAA          CGGGAGATTG TTAT CGACCTCCCG           TTTTTTTATGTCCGT 100 78
A1D48_RS22790 4482529 .. 4482556 + -14.2  -3.61764   TATCCAGCATGAAGC        TGGTGGAGGGAT AAAT ACCCCTCCACCA         TTTAACGATTACTCG 100 343
A1D48_RS22870 4497112 .. 4497125 +  -5.3  -2.62983   TCAGGGATGGCCCTC               GTTCA TCGC TGAAC                TGATGTAGCAATAGC  48 189
        coaA 4498116 .. 4498135 +  -7.8  -4.87626   GAAATAACAGAAAAA            AGGGGAGT ACCG ACTCCCCC             TTTTTACTATTCGGC  86 34
        trmA 4510494 .. 4510516 +    -2   -3.9638   TTCATTACTCGTCCT           TCACGTTATT CGG AATGATGTGC           TATTTTCTCTTGCTC  53 442
A1D48_RS22950 4512938 .. 4512957 +  -2.8  -3.56092   AATACCACTGCCCGC            CGCTAC-CA TGT TGCGCAGCG            TTTCCAGACTGGTCG  49 230
        argE 4518625 .. 4518643 +  -7.4  -3.87815   TTCGCAGTAATTGAC             GCCACG GGTTTTA CGTGGC             TTTATAAAGATGAGA  70 211
A1D48_RS22990 4521572 .. 4521584 +  -6.3   -4.0056   CAATATATTCCTGTC                TGCAT TTT ATGCA                TTTGTAAATCTTTCT  66 115
        cptA 4523557 .. 4523581 +  -2.1  -3.49777   TTCGACGTTACTGTT          TCCTCTGTT TGCGATC GGCAGGGGA          TTATCATGTATCACG  47 156
A1D48_RS23000 4524626 .. 4524637 +  -3.6  -4.02334   TCACATAGCGCATCC                GGGG CACG CTCC                 TTTATCCTGTCCATA  57 228
         fsa NONE
A1D48_RS23010 4526467 .. 4526490 +   -14  -3.67976   ATAAGGTCTGAGCAA          TACTCCTGAC GATA GTCAGGAGTA           TTTCAGCTTGCTGAC 100 37
A1D48_RS23015 4527535 .. 4527549 +  -8.5  -3.26031   AACCAAACACCAGAT               CGGCG CGGGT CGCCG               TGTATTTCACCTCGC  62 223
A1D48_RS23035 NONE
A1D48_RS23040 NONE
        mscS 4536129 .. 4536141 +  -4.7  -4.08216   CACCATCTGTTCATT                CAGCG CGT CGCCG                TTTTCGAAAAAGTGA  62 420
        metJ 4540037 .. 4540063 +  -6.5    -5.055   TACTGATAGCAAAGC         ATGCGGTCAGA ACGCC TCTGGCCGCGC         TTTTTTAACGATTCC  83 35
A1D48_RS23065 4542294 .. 4542321 +  -9.8  -2.72227   AGATAGTAAAAGTAA        AACAGGCGGAAG CTAA CTTCCGCCTGAA         TGGTTAAAACGTATT  69 45
        priA 4545932 .. 4545942 +  -2.6    -3.494   AAGATCCATCACACT                 TTTT ATG AAAA                 TTCTGTAACCGCTTC  48 72
        cytR NONE
        ftsN 4548161 .. 4548205 +  -2.2  -3.14132   AATCTCCCCCATCTA TACTTGCATTATG-CCCCGTAC GCC GTACGGGGCCGCAATTC-AGCA TTAGTAACCAAGGGG  44 50
        hslV NONE
        hslU 4550130 .. 4550147 + -11.3  -5.07486   TTTCATCACTGTTGA             TGGGGCT GAAA AGCCCCA              TTTTTATTGGCGCTA 100 56
        menA 4551106 .. 4551120 +  -5.8  -3.08032   TTTAACTGACAAATA               TCAATT AAC AATTGA               TGATTTTGCCAACAG  52 36
        rraA 4551682 .. 4551697 + -11.8   -5.3236   CGAGTGATCAAAAAA              GGCGCC GTAA GGCGCC               TTTTTTATGCGTTGT 100 34
A1D48_RS23125 NONE
        glpK 4554926 .. 4554955 +  -7.1  -2.66602   CGCCATCCGGCAAAA       TCTTTGTGCGGGG GCAA CTCCGCACACACA        TCAATTATTCCCTCC  57 44
        glpX 4556050 .. 4556071 + -10.9  -2.74122   TTGTTAGTTAGAGCC           TTCCAGCCT CGCG GGGCTGGAA            ATCTTTCTCCTGACG  74 46
A1D48_RS23140 4557358 .. 4557374 +  -3.6  -3.65351   CAAATCCAGAAATCA              CGGCGT CCGAT ACGCCC              TTTAAATGAGAATAA  53 511
A1D48_RS23150 4558159 .. 4558179 +    -4  -3.29727   CTGTTTCACAGACCA           T-GCTGCTC TGAC GAGCGGCCA            TCTTCCTTAATTCGC  50 80
        tpiA 4559060 .. 4559074 +  -2.7   -4.0162   GGCCTGATAAGGTAA               AGCCG CCATC CGGCA               TTTATGCTGTGGAGG  56 101
        lsrR NONE
        lsrK NONE
A1D48_RS23205 4569116 .. 4569143 +  -3.6  -3.72576   TTGATGACCTGTTGG        TTCAAGAT-ATCA CAC TGATGATCCTGAA        TTTCCTCGGCAGAAG  53 134
        cpxR 4579503 .. 4579517 +  -2.8  -3.53091   ATCTGATGGTTTCCG               CTTCAT GAT AGGAAG               TTTAACCGCGCGCAT  48 18
        cpxA NONE
A1D48_RS23295 NONE
A1D48_RS23300 NONE
A1D48_RS23305 4586218 .. 4586230 +  -2.6  -3.28712   ATCTCGTTGCCGGAT                GGCG ATTCG CGTC                TTATCCGGCCAACGC  46 59
        rhaT 4588691 .. 4588724 + -10.3  -3.55444   TAATCGCTTTGATTA     CTGAGATGACGCC ATTGGCTC GGCGTCATCCCGG      TTTCCCGCGTGAACA  77 38
        rhaB NONE
A1D48_RS23340 4593560 .. 4593611 + -13.8  -3.30243   GGCCGGATAAGACGC CCGCGTCGCCATCCGGCAAT AAATGAAACACA ATTGCCGGATGGCGCTGCGC TTATCCGGCCTACGT 100 60
        rhaD 4594512 .. 4594523 +  -7.2  -3.80625   ACCTCCCAACTCAAC                GCCG GATG CGGC                 TTTGCCTTATCCGGC  68 42
        fucO NONE
        rhaM 4596083 .. 4596119 +  -9.4  -5.49579   TCTATCTGCAGTAAG   TCGTGTGCCCGGT-GGC GCAA GCTTACCGGGCCTACGG    TTTTATTTTTTGTAG 100 27
A1D48_RS23365 NONE
A1D48_RS23370 4598072 .. 4598086 +  -8.5  -5.10208   ACATAAACGAAAAAA               GCGCC TGATC GGCGC               TTTTTATTGGCGTTA  91 296
A1D48_RS23380 4600545 .. 4600559 +  -8.5  -5.26875   GCGACTGTCGAAAGA               GCGCC CCAGA GGCGC               TTTTTTCGTTCGAAG  95 99
        fdnG NONE
        fdxH NONE
        fdoI NONE
        fdhE 4607306 .. 4607332 +  -5.8  -2.79098   TAAGTTCTCTGGTAT         ACCGGCTAGC AATCTAC GTTAGCCGGA         TCATTGCTCAATAAC  50 38
A1D48_RS23425 4609101 .. 4609155 + -10.2  -3.96624   CTAAAATTCAATTTT GTTTTCAACTTGAAAACTGGATAACG TTG CGCTAAATTGTTTTCAGGTTGAAAAC TTTGTAATGGAACTA  82 37
A1D48_RS23430 NONE
A1D48_RS23435 4610125 .. 4610139 +  -2.8  -3.62275   AGCGACCCCAAATCA               GCCA CGGCGTT TGGC               TTTCCGCTAATGGGT  51 221
        yihU NONE
A1D48_RS23475 4616699 .. 4616711 +  -3.3  -3.14564   TCGTCGATGAAATGA                TGGCG AAA CGTCG                TTAATACGAGGATGA  46 9
A1D48_RS23480 NONE
A1D48_RS23485 NONE
A1D48_RS23490 NONE
A1D48_RS23495 4622358 .. 4622371 +  -9.5  -4.08064   AACAATAAAATATAA               CGCCC TGCG GGGCG                TTTTGAGAGGCGATT  81 42
A1D48_RS23500 4623818 .. 4623847 +  -4.4  -3.21872   AATTAAACGACGCTT      GCCGCTTTATCCAT CCCG ATGGAT-G-GCGGC       TTCCCTATATTTGAA  50 35
        ompL 4624603 .. 4624623 + -10.4  -2.80195   CGAATCTGCATCACA            GCGGGTAG TTGTT CTGCCCGC            TCATTCATCCTGAAT  71 60
A1D48_RS23510 NONE
A1D48_RS23515 NONE
A1D48_RS23520 NONE
A1D48_RS23525 NONE
A1D48_RS23530 NONE
A1D48_RS23535 4630322 .. 4630348 +  -8.6  -4.87665   ATGTGAATAAAAAAA         CCCCGCCGAGCT TTC ATTTCGGCAGGG         TTTTTATCCGTAAGA  89 31
A1D48_RS23550 4634141 .. 4634158 + -11.3  -5.24129   CCGTGGAAACTTTCA             GCCCATC CCAG GATGGGC              TTTTTTCTCCACCAA 100 187
A1D48_RS23560 NONE
A1D48_RS23565 4636755 .. 4636778 +  -6.8  -3.93038   AAGATTAATAATTGA          GCGCAAAA CGCTGCTA TTTTGCGC           TTTACTGTTCCGATG  68 59
        yshB NONE
A1D48_RS23590 4640346 .. 4640357 +  -7.2   -2.5294   CCGCTATGCCGGATA                GCGC CGCT GCGC                 GTCTTATCCGGCCTA  57 45
A1D48_RS23605 4644728 .. 4644752 + -14.3   -5.8096   TAAAACATCTTATAA          AAACGCCGGTC AGT GACCGGCGTTC          TTTTTATTTTTTATC 100 10
        mobA NONE
        mobB 4647992 .. 4648011 + -13.6  -3.69283   CACACACGCAAAAAA            GCCCATCC TGAC GGATGGGC             TTCTTCACTAAATTG 100 123
        fadB NONE
        fadA 4661545 .. 4661563 + -13.1  -5.04385   TTAGTTGCCGTTTTT             CCCGCCC GTCAG GGGCGGG             TTTTTTCACCGTATG 100 181
        rfaH 4666729 .. 4666743 +  -4.2  -3.52204   GCAGATACGCGGGCT               CGTTGC GTC GTGACG               TTGGTTTCGGCGTAA  52 152
A1D48_RS23760 4675816 .. 4675830 +  -2.8  -5.72118   TCGCCACGTTAGCTA               TGCTTT ACC ACAGCA               TTTTTTATATTTTTT  89 108
A1D48_RS24575 4677427 .. 4677457 +    -9  -3.14931   TAATCAGGTCAGACA      CG-GGCGCTACCC GTCAAA GGGTAGCGCCGCA       TTGCTGCCGGATAAA  70 105
        metR 4681000 .. 4681013 +  -2.4  -3.45742   ATTAACCAGTAGTCC               TGCA GGAACA TGCA                TATTATTCATGATAC  47 81
        rhtB 4684590 .. 4684607 +  -3.3  -3.35679   GCGAAAATACCCCAG             CG-CGCCG CAG CGCCGACG             TTATCGCTGACAAAC  47 240
A1D48_RS23815 NONE
        rarD 4689475 .. 4689504 +  -4.9  -3.44051   TATAATCTGAAAAAA       TATGCCTCCCCTT GTAA GGGGGGTAGCATA        TTGTCATGCTAACGA  56 59
A1D48_RS23825 NONE
A1D48_RS23830 4690336 .. 4690367 + -19.6  -2.84803   GAGCCTGTAACTTTT      CAGGGTGGTTCAGC CGCA GCTGAATCACCCTG       TCCTTAATGTCTTAC 100 31
A1D48_RS23885 4698548 .. 4698566 +    -6  -3.29739   GCTGGGTTTTATCCT             TTACCGCT CAC AACGGTAA             TTCGTATCAGTTCCA  59 7
        cyaY 4699168 .. 4699182 +  -5.6  -4.95957   AAAAAGTTGACGTAA               CGCTGG TGA CCAACG               TTTTTCCTTGATTTC  80 237
        hemC NONE
        hemD NONE
        hemX 4706380 .. 4706408 +  -2.5   -4.3587   GCCGCGCCGCAAGGA        GAATAATGATGCT AAA AGTATTATTGCTC        TTTGTGTTGTTGCTC  60 20
        hemY 4707954 .. 4707970 +  -9.3  -4.16943   ACGCGATTGACATCC              CCCCGCC GCT GGCGAGG              TTTTAGCGTGTCGCC  82 395
        rhlB NONE
        gppA 4727741 .. 4727751 +  -6.8  -3.66178   TTCGCTCGCTTTGCC                 GCCA TCA TGGC                 TTTCAGATTAGCCAG  64 87
A1D48_RS24070 4732571 .. 4732608 +  -3.4  -2.52676   TCGTCTGCTTGATTT  TGTAG-GTCGGGTAAGCG CTAG CGCC-ACCCGACACTGCC   TACATTAACCCGCTA  42 77
        ilvY 4735191 .. 4735213 +  -4.8  -3.83771   ATACGGCTAAGCATA           TTCACCAAAG CAT CAATGGTGAA           TTTGCTGCATTTCTT  58 76
A1D48_RS24125 4744606 .. 4744618 +  -6.2  -5.15167   GTTGGCGTAAAAAAA                GGGC ATTAC GCCC                TTTTTATTAATCATC  83 31
        hdfR 4745993 .. 4746012 + -10.8  -4.06419   TTAGGCAAAAAAAAA            TCCTTAGC AGAT GCTAAGGA             TTATTTCTGGCAGGG  86 100
A1D48_RS24170 NONE
A1D48_RS24175 4754342 .. 4754360 +  -6.7  -2.52946   CCGCCCGATACCCTT            CCAGC-CG TAAA CGCGCTGG             CGTTTTGTCCAGCGG  51 395
        ravA NONE
        viaA 4765313 .. 4765331 + -10.2  -2.71712   AGACTGCCCAATCCC             GCCGCCGA TGG TCTGCGGC             ATTTCGCCGCGCAGC  66 144
        asnC NONE
        mioC 4767614 .. 4767629 +  -6.8  -3.92373   ATCTTCTTTTTAATA              G-CCCGG ATC CCGGGGC              TTTCTCCATCGGCTA  68 306
        mnmG 4769653 .. 4769678 +  -8.9  -3.04089   CCTACAAATTTGTAG         GCCCGATAAGC GAAA GCGCATCGGGC          ATTTGATTATTAACA  68 77
        rsmG 4770386 .. 4770403 +  -3.4  -3.30038   AAAAATCGACAGGTA             TAACGC ATTTCA GCGTTG              TTACATTTAACTCTG  48 84
        atpI NONE
        atpB NONE
        atpE 4772427 .. 4772439 +  -3.3   -3.4052   CGTGATGTTCGCTGT                CGCGT AGT AAGCG                TTGCTTGAATTAAGA  48 19
        atpF NONE
        atpH NONE
        atpA NONE
        atpG 4775977 .. 4775987 +    -4  -3.73968   GGGGCCGCCGCGGTT                 TAAC CAG GTTA                 TTTCGTAGAGGATTT  55 23
        atpD NONE
        atpC 4777850 .. 4777869 +   -10  -6.50115   CTTGAAAGCATAAAA            CCAGTCTG ATTG CGGACTGG             TTTTTTTTTTATCCT 100 47
A1D48_RS24300 4778782 .. 4778801 + -11.4   -5.1417   ACGCGCAACGGAAAA            CCAGCGGC CTCT GTCGCTGG             TTTTTGCTTTTCTGA 100 50
        glmU 4780513 .. 4780527 +  -5.6  -2.83271   GGATAAAATAATCCT               CCGCTC CAT GAGCAG               TACTTATAAAAATAA  50 91
        glmS 4782489 .. 4782506 + -12.7  -5.74122   TAGTACCAGGCAGAA             GGCCGTC GACA GACGGCC              TTTTTTTGTGTGCTG 100 49
A1D48_RS24325 4785264 .. 4785278 +  -3.4  -2.96611   GCTGTTCCAGAAAGC               CGCGGC CAG GTCACG               TCTGTAACATTTTTT  44 4
A1D48_RS24330 4786725 .. 4786751 + -12.2  -5.96894   CATCTCCCTCTGCAG         GCTGGTCTGGTG TCT CCCCGGGCCAGC         TTTTTTTATTTCCAT 100 43
        pstS 4788016 .. 4788029 +  -3.1  -3.72695   ATCCGGCAGGGGCAA               CGTCGT AAA ACG-CG               TTTAATGGAAAGAGT  53 127
        pstC NONE
        pstA 4789911 .. 4789936 +  -8.3  -3.10175   TTAAAGACATTGTAG         GCCTGATAAGCG TAG CGCC-ATCAGGC         ATTATTTTACGGCGT  66 37
        pstB NONE
        phoU 4791560 .. 4791586 +  -8.7  -2.84878   GTACAGATGCTGTAG        GCCGGATAAGCG TCAG CGCC-ATCCGGC         ATTTCAGTTAACGCG  65 86
A1D48_RS24370 4794634 .. 4794656 + -14.8  -4.58283   CACTGATGAAATGAA           CCCTCGCCCC ATC GGGGGGAGGG           TTTTTAACGAACTTA 100 35
        rpmH 4806263 .. 4806276 -  -2.3  -3.58343   TTTATTACTTGGAAA               CGGTC AGAC GAGCG                CGGCCTTTAGCACGA  49 1
        rnpA NONE
        yidD NONE
        yidC 4803896 .. 4803913 - -12.7   -5.4505   TGTTGCAATAAAAAA             GGCGGTC ATAT GACCGCC              TTTTGATTGTAGGCC 100 118
        mnmE 4802439 .. 4802465 - -10.9  -5.00138   TATGGAAAGTAAAAA         CCCGCGTTAAC AGGCA GTTAATGCGGG         TTAGTGAACGTTCAC 100 61
A1D48_RS24405 4800052 .. 4800062 -    -4  -3.24146   GCCGTCAATGAAAAG                 GAAA TGA TTTC                 ACTTTTCTTGGTTAA  48 73
A1D48_RS24400 4798753 .. 4798782 -  -8.5  -2.80195   ATTCAGTAGGAAGTA       CGGAC-GCAAAGCC TTC GGCAATGCCGTCCG       ACTTCTCTACAGCGT  64 418
A1D48_RS24390 NONE
        yidZ NONE
A1D48_RS24380 NONE
A1D48_RS24375 4794634 .. 4794656 - -14.8  -3.57418   CACTGATGAAATGAA           CCCTCGCCCC ATC GGGGGGAGGG           TTTTTAACGAACTTA 100 38
A1D48_RS24365 NONE
        yieH NONE
A1D48_RS24320 4782489 .. 4782506 - -12.7  -3.38272   TAGTACCAGGCAGAA             GGCCGTC GACA GACGGCC              TTTTTTTGTGTGCTG  90 134
        asnA 4764753 .. 4764774 -  -5.7  -2.76263   GGGAGGATTTAACGA           GCAGTGCGC AAAA GCGTTCTGC            CTGGCGTTGATGCGC  50 450
A1D48_RS24210 4759949 .. 4759968 - -10.8   -3.0873   GAAATCAGGTGAAGA            TAATCGCC CAAT GGCGATTA             TCTTGTGGGAATCTA  76 94
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB 4755891 .. 4755914 -  -9.5  -2.75844   GGTTCCACGTCAAAG          TGCGCCACC GGTTAG GGTGGCGCG           TGCCCTGCTTTTCTT  69 113
        rbsK NONE
        rbsR 4753705 .. 4753732 -  -6.2   -3.4252   TCTGACGGACGATAA        CGCCAGCA-GCGG CAA CAGCGTTCTGGCG        GTTACGCAGCAATTG  56 231
A1D48_RS24165 4749773 .. 4749786 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
A1D48_RS24160 4749575 .. 4749610 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA     TTAAGGCAGGTGACT  79 61
A1D48_RS24155 4746493 .. 4746505 -  -3.3  -3.05816   TTATTGCGTACTCAA                CTCTG AAT CAGTG                CTGAAAATCTTCTCT  45 56
         rrf 4746201 .. 4746216 -  -3.3  -2.82742   ATTCTTTTACAACCA              CTGAT TTTTAC ATCAG               TTTACTGCTTAATTT  43 44
A1D48_RS24145 4746089 .. 4746108 -  -2.8  -2.79684   CTACCAATTGAACTA            CGCC-CC TAATTAG GGTGGCG            GAACGGACGGGACTC  41 21
A1D48_RS24140 4745993 .. 4746012 - -10.8  -6.11644   TTAGGCAAAAAAAAA            TCCTTAGC AGAT GCTAAGGA             TTATTTCTGGCAGGG 100 33
        maoP 4744606 .. 4744618 -  -6.9  -5.40072   GTTGGCGTAAAAAAA                GGGCA TTA CGCCC                TTTTTATTAATCATC  91 32
        ilvL 4742582 .. 4742605 - -13.8  -5.78622   TCAGGCCAAAAAAAA          CCCCCGGACC TTTC GGTGCGGGGG           TCTTAGTTCGTTAAG 100 50
A1D48_RS24115 NONE
        ilvM NONE
        ilvE 4739609 .. 4739623 -  -4.4  -2.78679   TCCTGTGACGCAAAT               TATTTT GGG AAAATA               TTAATTTTATTTATT  47 39
        ilvD 4737608 .. 4737632 -  -3.7  -2.91264   GGCGCGACTGACAGA         GGTTGA-GAT TCCGCC ATCATCAACC          TCCCAGTTTCGATTT  46 20
        ilvA 4736039 .. 4736060 -  -8.7  -2.63479   AATATCTTGATATCA           GGCCCAC TTTACTTT GTGGGCC            CGAAAAACTAAACGC  63 45
A1D48_RS24090 NONE
A1D48_RS24085 4735089 .. 4735105 -  -9.4  -5.40072   CTGCGCGCAAAAAAA              GCGGCT GCATG AGCCGC              TAATTGATGCGTTCT 100 62
        ilvC 4732523 .. 4732550 -  -9.9  -5.28942   TATCGCAAATAAAAA       GCCGGGT--GGCG GCTA CGCCTTACCCGGC        CTACATCGTCTGCTT 100 88
A1D48_RS24065 NONE
A1D48_RS24060 NONE
A1D48_RS24055 4729807 .. 4729832 - -13.3  -3.32202   GAGGCCCAGAGAAGA         CCAGGCTGCTT TTTC AGGCAGCCTGG          AAAAGGTCAATCAGC  95 36
A1D48_RS24050 4727445 .. 4727459 -  -2.7  -4.30576   GCTTCATCAGCAAAA               CGCGG TACCG CCCCG               TGTTGCGGAACAGCT  62 285
        trxA 4724281 .. 4724331 - -10.6  -2.74563   CTGATACCTTAATCA TTCGTCGAATGACAGACGC-CTG ACTATA CAGCGCCTTTGTCATTCGACGTA TAAAAGGTATTACGC  74 35
A1D48_RS24025 NONE
         rho 4722618 .. 4722649 - -14.6  -4.21098   AGATGAATCGCAAAA      CAAAAACGCCACGT AAAA ACGTGGCGTTTTCA       GGTAAAGACCAGGTT 100 39
        wecA NONE
        wzzE 4720237 .. 4720260 - -12.5  -3.06696   TTCTCTTCGAATAGA          CAGTAGGGG CCCAGC CCCCTACTG           CAGAGGTGTTGCTAA  83 37
A1D48_RS24005 NONE
        wecC NONE
        rffG NONE
A1D48_RS23990 NONE
        rffC NONE
        rffA NONE
        wzxE NONE
A1D48_RS23970 NONE
        wzyE NONE
        rffM 4710243 .. 4710274 -  -9.4  -3.56092   CGATTATGTTGTAAA      TGAGCAGCGCCATA AGCA CAAGCCGCTGCTCA       AGTCATCAGAAGGGA  75 44
A1D48_RS23955 NONE
A1D48_RS23950 NONE
A1D48_RS23945 NONE
A1D48_RS23940 NONE
A1D48_RS23935 4708142 .. 4708157 - -11.8   -5.8901   ACAGAAAACAAAAAA              CCCCGC CGAA GCGGGG               TTCAAAATTGGTCGG 100 34
A1D48_RS23910 4700603 .. 4700615 -  -2.7  -4.75372   AGCACTTACGAAAAA                TACTG CTG CAATA                GCGGTGCGTCATGAT  68 3
A1D48_RS23905 4700011 .. 4700024 -  -2.3  -4.21737   ACGAAAACAATGAAA               GACGC GATA GCGTT                TTGAACGGTCTGGAT  57 130
A1D48_RS23900 NONE
A1D48_RS23895 NONE
A1D48_RS23870 4697289 .. 4697299 -  -2.4  -2.56715   ATCCTCAGTAATTGA                 CCTG GGA CGGG                 CCATCTCCCGTTGCG  39 4
        dapF NONE
A1D48_RS23860 NONE
        xerC NONE
        yigB 4693998 .. 4694008 -  -8.2   -5.1166   CATGAAAACTAAAAA                 CGCC CGG GGCG                 CTTCGCTTACCGGGG  87 115
        uvrD 4691442 .. 4691455 -  -4.5  -4.42765   CGGGAAAAAATGAAA               GGTCG CTGA CAACC                GCTAAGGCTATCAGC  66 371
        corA 4690307 .. 4690318 -  -4.4  -3.73294   GAAAAAGAGGTTAAA                GGTA TCAA TACC                 TGGAGCCTGTAACTT  58 86
        pldA 4686956 .. 4686977 - -12.3  -4.63479   CACCATAAATCAAAA           CAGGCGCTA TTTT CAGCGCCTG            CGAGAGAAACTGCAA 100 60
        recQ NONE
        rhtC 4684026 .. 4684036 -  -2.4  -2.50816   TGGGTATCCAGCAAT                 GGCG CGC CGCA                 GGCGCTATCGATCTG  38 404
        pldB 4682637 .. 4682647 -  -4.6  -3.91798   TAACCTCTAAGCAAA                 GCGA TTT CCGC                 TGGATAAATTAGGCT  59 6
        yigL 4681780 .. 4681796 -  -6.6  -3.12999   GTAGCGGAGAGTGAA              GTTGAC AACTG GTCAAC              TAACAAACAATCACA  58 41
A1D48_RS23780 4680520 .. 4680530 -  -3.2  -4.25104   CGCTGGCCAGCAAAA                 CGCA GAT TACG                 CCGGAAGATTTAGCC  62 327
        metE 4677427 .. 4677455 - -12.5  -2.90688   TAATCAGGTCAGACA       CGGGCGCTACCC GTCAAA GGGTAGCGCC-G        CATTGCTGCCGGATA  82 61
A1D48_RS23765 4675729 .. 4675740 -  -2.2  -3.60316   ACGGCGGGAAAAAAG                GCTA ACCA CAGC                 GCATTACGATGTTTG  49 98
A1D48_RS23755 4673865 .. 4673881 -  -9.4   -5.2853   CACGCAAAAAGAAAA              GGCCGA ACGCG TCGGCC              TTTGCAAAAGAGAGG 100 45
        rmuC 4672281 .. 4672298 -  -2.6  -3.11727   AAGAAGTGTAACAGA             TTGGGC CAATTT GCCCTA              CTCTGCGCCAGGACT  43 58
        ubiE NONE
        ubiJ NONE
        ubiB 4669136 .. 4669146 -  -2.4   -2.8937   ACATACTTTTACATA                 CGAC CGG GACG                 ACATTGACTTGCGGC  41 107
        tatA NONE
        tatB NONE
        tatC 4667409 .. 4667430 - -15.9  -2.62184   CTTGCCCCCATATGA           CAACCGCCC TGGC GGGCGGTTG            TGTTTAGTCTTCAGT 100 29
        tatD 4666226 .. 4666246 -  -3.2  -5.02074   TCACCCTGGAAAAAA            TGGTACGC GGAAA ACGTACCT            CCGTCAGCGAACCGC  76 389
        ubiD 4664395 .. 4664436 -  -2.4  -3.01712   GGTGTCGGGTCAATA CCGACATTTTTCAAGCCGAG TCGC CACAGCCTGAAA--TGTCGA TGTCCGCTTTCAGTT  42 39
A1D48_RS23700 4663636 .. 4663653 - -12.7  -4.74504   AGGCTAACGTAAAAA             GGGACGC TACT GCGTCCC              ATAAAATAGTTAAAT 100 35
A1D48_RS23695 4661446 .. 4661479 - -21.1  -3.09933   CGGCAACTGAGCGAA     TCCCCGGGCACATAG ATAA CTATGTGCCCGGGGT      GAGCAAAGGCAGCCA 100 132
        pepQ NONE
A1D48_RS23675 NONE
        trkH NONE
        hemG 4653799 .. 4653817 -  -3.2  -2.52623   TCTGCCTGACAAGAG             GAAATTTA AAA TAATTTTC             TGAGTGCGCACTTTT  42 53
A1D48_RS23660 4651892 .. 4651905 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
A1D48_RS23655 4651731 .. 4651746 -  -7.6  -3.17075   GCGTGGTGAAGCGAA              GCATAC TGAA GTATGC               GAGCTTTGCCACAAC  62 59
A1D48_RS23650 4651536 .. 4651569 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTCGTAAAC  69 51
A1D48_RS23645 4648455 .. 4648467 -  -3.3  -3.05816   TTATTGCGTACTCAA                CTCTG AAT CAGTG                CTGAAAATCATCTCT  45 56
         rrf 4648154 .. 4648185 - -18.2  -4.65494   AAACTACAGATAAAA      CAAAAGGCCCAGTC TTTC GACTGAGCCTTTTG       CTTAATTTGATGCCT 100 37
A1D48_RS23620 4646473 .. 4646483 -  -8.2  -3.62597   TTTACTCTTTAATAA                 CGCC GCG GGCG                 CGTAAAAGCGCCGTT  69 1
A1D48_RS23615 NONE
        dsbA 4644731 .. 4644749 -   -16  -4.87273   AACATCTTATAAAAA             CGCCGGTC AGT GACCGGCG             TTCTTTTTATTTTTT 100 32
        polA 4640410 .. 4640436 - -18.1  -5.55769   GCGCACAATAAAAAA         CGCCCCAGTCA TAAAC TGACTGGGGCG         GCTAAAATATTCAGC 100 250
A1D48_RS23585 4639171 .. 4639224 - -19.9  -3.99405   GGAATCTAGCAGAAA GCAAGCAAAGAAAAAAGGCGACAGA GTAA TCTGCCGCCTTTTTTCTTGACTCAC GACCCTTAACGGGTT 100 31
        yihI 4638545 .. 4638563 -  -6.1   -3.3636   CCACACCAGATAACA             TATAACC GGAAG GGTTATA             AGCAGGACGGGCAAG  59 58
        hemN 4636536 .. 4636564 -  -6.6   -3.3197   ACATTACTGGCACAA        TGGGCGGACCGC GCCTT GCGATCCGGTCA        TCAAAACCTGCTTTC  58 495
        typA 4630322 .. 4630348 -  -8.7  -5.80364   ATGTGAATAAAAAAA         CCCCGCCGA GCTTTCATT TCGGCAGGG         TTTTTATCCGTAAGA 100 48
A1D48_RS23465 NONE
A1D48_RS23460 4612930 .. 4612956 -    -8   -4.3821   AAAAGACAATAGAAA         CGCAGACGATGT TCA ATATCGCCTGCA         TCACAGCGCCGTTTT  79 89
        yihX NONE
A1D48_RS23450 NONE
         dtd NONE
A1D48_RS23440 4609739 .. 4609750 -  -7.2  -4.39828   AACACCTGGAGAAAA                CGCC CCCT GGCG                 TTTCAGTATTGCGAA  79 219
A1D48_RS23420 NONE
A1D48_RS23415 4606832 .. 4606848 -    -5  -3.93695   GTCAGCAGCGATAAA              GCCCCG TTTAT CTGGGC              CGCGCTCTCCCTTTA  63 517
        fdhD 4600545 .. 4600559 -  -9.2  -3.35597   GCGACTGTCGAAAGA               GCGCCC CAG AGGCGC               TTTTTTCGTTCGAAG  71 205
A1D48_RS23375 4598072 .. 4598086 -  -8.5   -5.4387   ACATAAACGAAAAAA               GCGCC TGATC GGCGC               TTTTTATTGGCGTTA 100 96
A1D48_RS23360 4596144 .. 4596158 -  -8.5  -3.30124   TTGTAGGCCGGATAA               GGCGG TTACG CCGCC               ATCCGGCAATTTCAA  69 37
A1D48_RS23330 4589602 .. 4589613 -  -7.2  -3.06796   CCGTAGGCCAGGTAA                GGCG CAGC CGCC                 ATCCGGTATTAAAGG  60 88
        rhaR 4588244 .. 4588254 -  -2.4  -3.19656   AAACCGATGCATGAA                 GCTG CTG CCGC                 GCTTGGCGTTGACCC  43 446
A1D48_RS23310 4586287 .. 4586309 - -14.2  -5.82316   ACCAGGTAAAAAAAA           CCGGCTACCT ATA AAGTAGCCGG           AAAAGGGAATAAATA 100 58
        sodA NONE
A1D48_RS23285 NONE
A1D48_RS23280 4581185 .. 4581199 -  -4.9  -3.85389   GCGGAATAAGGCAAA               CGCCG TCATC CGGCA               ATGTACACCTGACTG  59 78
A1D48_RS23275 4580550 .. 4580565 - -10.4  -3.76125   CTATGGCAACCCAAA              CGCGCT GGAA AGCGCG               CTGGAAAATATTGTT  76 388
        cpxP 4578103 .. 4578121 - -14.6  -6.02914   TGGAGATAAAAAAAA             CCCCCACA TCA TGTGGGGG             AAGACAGGGATGGTG 100 65
        fieF 4577005 .. 4577019 -  -2.9  -3.39432   AAACGATCCAACGAA               TATAC AGATA GTATA               ACAATCCCTTCCTGC  46 117
A1D48_RS23250 NONE
A1D48_RS23245 4574734 .. 4574758 - -15.1  -5.63517   GTGGCAAAGAAAAAA          CCCGGTAACAT AAT ACGTTACCGGG          TTTATAAACGGTTTA 100 38
A1D48_RS23240 4573783 .. 4573824 - -17.7  -3.37053   AGAGAGTGTAACTAA CCATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATCG  GTTTCACATATTTTT 100 116
A1D48_RS23235 NONE
A1D48_RS23230 NONE
A1D48_RS23225 NONE
A1D48_RS23220 4569408 .. 4569423 -  -3.2   -2.9675   GATGGGACAACCAGA              GCGACA TACC TGTCTC               CTGACGATTTTTTCA  44 114
A1D48_RS23215 4569206 .. 4569245 -  -2.7   -4.4891   GCCAGCAGGACAAAA  GAGCCATCGCTTTGGCG TATCAC CGCCAGCGCGATACATC   ACAGCATCCCCGCCC  63 24
        lsrA NONE
        lsrC NONE
        lsrD NONE
        lsrB NONE
        lsrF 4560175 .. 4560214 -  -2.8  -3.86571   CCAAATAAAATAACA  GTCATCCCCATCTCCTCGC ATC GGTAAAAGATGGGGAAG-C  GATCTCATTTAACCT  54 34
        lsrG NONE
A1D48_RS23160 4558958 .. 4558971 -  -8.1  -3.57144   GCCGTGATCGTGAAA               GCAGC AGAA GCTGC                TAAACAGGCTTAATT  69 130
A1D48_RS23145 4556825 .. 4556851 -  -6.5  -3.83409   CGACAGATGACTAAA         CATCTGCGCCG CCGAC CGGGGCATATG         ACGGCTGAACATTAC  64 153
        zapB 4551682 .. 4551697 - -11.8   -5.1675   CGAGTGATCAAAAAA              GGCGCC GTAA GGCGCC               TTTTTTATGCGTTGT 100 223
        rpmE 4543239 .. 4543252 -  -9.5  -5.88565   TCCATAACAAAAAAA               GCGCC CTGC GGCGC                TTTTTTTCTGGCGGT 100 44
A1D48_RS23075 NONE
A1D48_RS23070 4542296 .. 4542319 - -16.8  -4.71222   ATAGTAAAAGTAAAA          CAGGCGGAAG CTAA CTTCCGCCTG           AATGGTTAAAACGTA 100 273
        metB NONE
A1D48_RS23050 4535814 .. 4535827 -  -5.2  -3.08464   TGATGAGGGAGCGAA               GCGC AACCCG GCGC                TTCGCTCACGAACTT  51 48
A1D48_RS23030 4530753 .. 4530785 -  -4.9  -3.95036   AATCACGCCAAAGAA      TGAGGAATATTCAGC AAA GTTGAATTTTCTTCA      TGTCACGCCGCGACA  61 65
        metF 4529718 .. 4529733 - -10.4   -4.1711   ATGAGGTGTAATAAA              GCTCCC GGCA GGGAGC               TGGAGGTTATAAACC  85 32
        katG 4527348 .. 4527379 - -15.2  -4.17491   ATTAAACGCGGAAAA      CGTCAGCGACTACC GAAT AGCAGCCGCTGACG       AATTAACCTATCAGA 100 41
        argC NONE
        argB 4515382 .. 4515393 -  -7.2  -3.30243   ACGTAGGCCCGATAA                GGCG CAGC CGCC                 ATCGGGCGAACAAAT  63 43
        argH 4513857 .. 4513884 -  -8.2  -5.00616   TTTTTGCGTAAAAAA        GCCCGGCGTCGC TGAT GCTCGGCCGGGC         AGTATTACCTGATAG  87 58
        oxyR 4512399 .. 4512420 -  -5.9   -3.5627   ATACCATTCCGGAAA           TCAGTTCTG TCGG CAAAACCGA            GCAACAGTTAACGGC  57 321
        fabR NONE
A1D48_RS22935 4509860 .. 4509913 - -10.3  -3.58343   GCTATCAGTGCGAAA CCATTTTTGTCGATCCGCCGCGCAG CGGT CTGGACAGCGAAACGGAAAAAATGG TGCAGGCTTATCCAC  74 236
        btuB NONE
        murI 4505589 .. 4505601 -  -4.9  -3.16068   TCTTCAATTTAAAAG                TTTGA TGC TCAAA                GAATTAAACTTCGTA  52 387
A1D48_RS22915 4504008 .. 4504021 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGAACAGTTCTT  40 36
A1D48_RS22910 4503847 .. 4503860 -  -5.3  -2.71745   CGTGGAATAACGAAG               CATAC ATCA GTATG                TGAGTTATTTCACAA  49 61
A1D48_RS22905 4503650 .. 4503683 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTCGTAAAC  69 51
A1D48_RS22900 4500432 .. 4500443 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 90
         rrf 4500259 .. 4500308 - -22.5  -2.62616   CCATCCGGCAGACTA CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTATTTG ATGCCTGGCAGTTCC 100 28
        murB NONE
        birA 4498117 .. 4498134 - -11.3  -5.57729   AAATAACAGAAAAAA             GGGGAGT ACCG ACTCCCC              CTTTTTACTATTCGG 100 33
A1D48_RS22865 NONE
A1D48_RS22860 4496511 .. 4496531 -  -2.5  -3.05816   TCATTCTGCACTGAA            TATCGAGAG AAA CTCTCTTTA            TTCGAGCCGGTAAGC  43 81
A1D48_RS22855 NONE
A1D48_RS22850 4496247 .. 4496263 -  -4.3   -3.3071   ATATCACCACATCAA              CCAGGCA ACA CGCCCGA              CTTGTTGAATGCTAA  52 76
         tuf 4494962 .. 4494979 - -11.3  -4.60924   GAAAGCGTGCAAAAA             GGGCATC AAAT GATGCCC              TTTTATTGCGCATTG 100 60
        secE NONE
        nusG 4493786 .. 4493814 - -17.6  -5.35224   CCCATAAAAACAAAA        GGCGCGAAATTG TATGT CAATTTCGCGCC        CTATGCAACGATTAG 100 65
        rplK NONE
        rplA 4492511 .. 4492547 -  -6.6  -2.80513   ATATTTCAACAGAAT   CGTGGG-GGTAAGATTG TAGA CAAAATCACCGCCCACG    TAAAGACTAATCTTA  55 38
        rplJ 4491637 .. 4491650 -  -8.1  -3.89695   GCTTGATAAAGACAA               CTGCG ATTA CGCAG                CTTCTTTTGCATCGC  72 18
        rplL 4491146 .. 4491171 - -17.7  -4.64766   CTTACAGCGCAAAAA         GGCTGGTGACT AAAA AGTCACCAGCC          ATCAGCCTGATTTCT 100 65
        rpoB 4486817 .. 4486846 - -13.6   -3.4252   TCGGAGTTAGCACAA       TCTGGTGTCGGG TTTTAC CCCGACACCAGT        GACCTGTTTGAGCGA 100 44
        rpoC 4482528 .. 4482557 - -12.9  -2.53164   GTATCCAGCATGAAG       CTGGTGGAGGGAT AAAT ACCCCTCCACCAT        TTAACGATTACTCGT  84 33
A1D48_RS22795 4481811 .. 4481835 -  -2.3   -3.6796   AATAGACTTTAATAA          CTTAGATTTAT GGG ATAAATTTAAA          GTCACATTTGGACTC  49 387
A1D48_RS22785 NONE
A1D48_RS22780 4480275 .. 4480298 -  -8.8  -4.67234   ACGTAATGTGAAAAA          CGGGAGATTG TTAT CGACCTCCCG           TTTTTTTATGTCCGT  89 170
        nudC NONE
        hemE 4471798 .. 4471813 -  -3.2  -4.34859   ACGAAAAGAGAGAAA              GCCG GGGATATA CGGC               ATGGTGGTGGCAATA  62 247
A1D48_RS22725 NONE
        hupA NONE
A1D48_RS22715 4469251 .. 4469261 -  -8.2  -2.65993   ACTATACGCAGACCA                 GCGC GCT GCGC                 CAGCAACTGATATCC  56 322
        zraS NONE
        zraR 4465760 .. 4465770 -  -2.4   -4.4648   AGCTGGATGAGAAAA                 CCTC CGA GTGG                 GACGAGCGCGCTTCA  62 334
A1D48_RS22685 4460987 .. 4461000 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
A1D48_RS22680 4460750 .. 4460785 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA     TTAAGGCAGGTGACT  79 100
A1D48_RS22675 4457535 .. 4457546 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 90
         rrf 4457362 .. 4457411 - -18.1   -2.7035   CTCACCGACAGACTA CAGATAAAACAAAAGGCCCAGTC TTCC GACAGGGCCCTTCGTTTTATTTG ATGCCTGGCAGTTCC 100 28
        metA 4455535 .. 4455550 - -10.4  -5.63517   TTCGGAAATAAAAAA              GGCACC CGAA GGTGCC               TGATTCAACATGCTG 100 71
        aceB NONE
        aceA NONE
        aceK 4450023 .. 4450039 -  -6.5  -3.17527   TATTTATGACGAACA              CCGCGAA CCG TTTGCGG              CCCTCTCTATTTCCG  56 523
        metH 4445288 .. 4445310 - -14.2   -3.4214   ATTGTAAGAAAGAGA           CAAGGCACCC AAT GAGTGCCTTG           TATGTTGTAAGGAAA 100 58
A1D48_RS22625 4443387 .. 4443438 - -20.4  -3.12999   CCAGGCCACATTGAA TGCCGAATGGCG-GGCCTACG CGCATGTTCTC CGTAGGCCCCGCCATCCGGCA TTTCACTTAATACTC 100 32
A1D48_RS22615 4442512 .. 4442527 -  -3.2  -2.78463   ATTTTGCGGATTATA              CCTGTA ATTT TTCAGG               CGATACCAGATGGCA  43 5
A1D48_RS22610 NONE
        rluF 4440609 .. 4440627 -    -6  -3.53224   TACTGGTCCGGGAAA             CCGATTGT TGA AAAATCGG             GCGAAACGGCAAAGG  60 415
A1D48_RS22465 4419129 .. 4419146 -  -4.7  -3.10796   CGCTATCAGGCAATA             CGCTGCC GGAT GGCGACG              CAAGCGCCTTATCCG  49 98
A1D48_RS22455 4415584 .. 4415601 -    -7    -5.626   TATCTTATAAAAAAA             GCCGAT GTGAAT ATCGGC              CTTTTTATTATCTTA 100 125
A1D48_RS22450 4414975 .. 4414996 - -11.7  -4.13014   TCCAGAGGGGCAAAA           TAACCACAC CGGA GTGTGGTTA            TGGTTAAACGTACCG  93 44
A1D48_RS22445 NONE
A1D48_RS22440 NONE
A1D48_RS22435 4411380 .. 4411394 -  -2.1  -3.28924   GAGGTTTCTGTATAA              CG-CAC AAAT GTGACG               GGTATCTATATTTTT  45 114
        psiE 4410779 .. 4410798 -  -5.6  -2.75183   AGTTTTATCGAAGTA            CCTGCCCG GCAA CGGGCAAT             GCCACTGCCCTCAAC  50 157
        malK NONE
A1D48_RS22405 4403976 .. 4403987 -  -7.2  -2.57581   CCAACCCAAACATAT                CGCC GAAT GGCG                 GCTGGCGCCTTATTC  57 113
        malM 4402941 .. 4402960 - -11.4  -5.75599   GAAATGATAAAAAAA            GGTGCGCC AGGA GACGCACC             AGTTGCTGCAAAATC 100 59
        ubiC NONE
A1D48_RS22390 4401346 .. 4401372 -  -7.3  -3.54543   AGCCAGTGCCTGAAA        TGCCCGAT-GGC GTAA GCTTATCGGGCA         ACTGATATGACGTAT  65 83
A1D48_RS22380 4398315 .. 4398330 -    -4  -2.84839   TATATACAGTTAAAG              GTGATT TTGG AACCAC               AAACGGCGCAAAAAA  46 67
        lexA 4397594 .. 4397615 -  -5.1  -3.30124   CCGTAGGCCTGATAA           GCGCAGCGCC ATC AG-GCTGCAC           GATTGCCGGATGACG  54 65
        dinF NONE
A1D48_RS22365 NONE
A1D48_RS22360 4395725 .. 4395752 -  -3.4  -4.74103   GCCTGAACGGAAAAA        CGGGCG-GC AGTAGAGAGGG GCACGCCCG        CATTCATAAGCAAAC  69 83
A1D48_RS22350 4393607 .. 4393627 - -18.3  -3.70068   TAGCATAACGCTAAA            CCGGAGGCG TAG CGCCTCCGG            TGAAAGCACCTCAGA 100 36
        dusA 4392498 .. 4392521 -  -8.1  -5.07523   GATATATAAAGAAAA          CGCCCTGCA AGACTG CACAGGGCG           TGGTGAGATTGACTA  87 56
        pspG 4391986 .. 4392006 - -12.6  -2.54371   CTCTGCAAAGAAATT            GGGCTTCC ACCCG GGAAGCCC            TTTCTTTTTTTGTTC  81 161
A1D48_RS22330 NONE
         alr 4388355 .. 4388381 -  -8.7    -3.494   CAATGCGCGATACAA        GCCGGATAAGCG CAAG CGCC-ACCCGGC         CCGCCGCGTATTTAA  71 37
A1D48_RS22320 4386967 .. 4387017 -   -14  -3.29541   AGGATGATCACAACA GCTATTGTCAGGCCGGAGGGCAAT GTT ATCGCCGTCCGGCCTGAATATTAC ATGACAGCGGCAAAT 100 22
        aphA 4386089 .. 4386107 - -10.3  -5.13521   AAATCATGCAAAAAA             GGAGAGC CTGTC GCTCTCC             TGATTTTTAGTACTC  93 32
A1D48_RS22305 NONE
A1D48_RS22300 4384982 .. 4384999 -  -7.7  -3.70104   AAGCAGGCAAGAGAA             GACAGCG ACGA CGCTATC              CGCGAGTCCGCCGCG  65 236
A1D48_RS22275 4380614 .. 4380633 - -12.2  -4.69053   TACCAGGTAAGAAAA            TGCCTGGT TTAC ACCAGGCA             TTTCAGCAGACGAGA 100 86
A1D48_RS22260 NONE
A1D48_RS22255 NONE
A1D48_RS22250 NONE
A1D48_RS22245 NONE
A1D48_RS22240 4358320 .. 4358343 - -12.4  -4.00868   TTATCCATAAGTAAA          CCCCCTCACC CAAA GGTGAGGGGT           CTCCGTTATTATGCG 100 34
A1D48_RS22235 4356166 .. 4356206 - -13.6  -3.55444   TGCCGACTCGTTAAA  TGACAAAAAAGACCCGTT TGTGC AACGGGTCTTTTTTATTA  AGCAGTACCACCTGA 100 65
A1D48_RS22225 4353363 .. 4353378 -  -6.1  -2.87769   ACGCATCAAACATTA              GGCGA GTATAT TCGCC               AGCGCCGTCTCCTGT  51 171
        soxR 4352607 .. 4352632 - -13.4   -4.4572   AAGACCGGAAACAAA         CTAAAGCGCC CTTAGC GGCGCTTTAG          TTTTAGGTGAACTCA 100 61
A1D48_RS22210 4351604 .. 4351614 -  -3.2   -4.1711   AGTATGCTCAATAAA                 TCGC CAG ACGA                 TGCGCAAACGTTATC  60 118
A1D48_RS22200 4349964 .. 4349996 - -13.6  -4.07885   GATGTGTCCTGAAAA     TG-AAAACGGGCGAC CAAC GCCGCCCGTTTTTCA      GAATGAAGGCAGAAC 100 40
A1D48_RS22190 4348215 .. 4348235 -  -8.4  -2.82742   ACCGGGCCACAAGGA            CTACTGAT TTTCT ATCAGTAG            CGCTTCCATCAAATC  64 5
A1D48_RS22180 NONE
A1D48_RS22175 4345999 .. 4346041 -  -5.7  -3.14132   GGGCGTGCGCATTAA TCTTACCGTTTCCTCCGGCCC TGT GGGTCGGAGGAAA-A-TCAGA ACATCACCCTCGCCA  54 21
        nrfA NONE
        nrfB NONE
        nrfC NONE
        nrfD NONE
A1D48_RS22130 NONE
        nrfF NONE
        nrfG 4334773 .. 4334793 -  -5.5   -3.6502   TATTTGTTATGGAAA            GTTTTTTAC TTC GTCAAAAAC            GAATAATACACTGAG  59 118
        gltP 4333115 .. 4333167 - -10.1  -3.30124   TTGTAGGCCTGATAA GCGT--A-GC-GCCATCAGGCAACCCG GAG CAGGTTGCCGGATGGCAGCGTGAACGC CTTATCCGGCCTACA  76 89
A1D48_RS22080 4325050 .. 4325064 -  -2.9  -2.87344   TATGCCCGCGAGAGA               TTAAG CGAAC CTTAA               GCGCGAAATTTATTC  42 35
        pmrR 4324870 .. 4324885 -    -9  -4.15029   ACCGTACAGAAAGAA              CAGGCA CCCG TGCCTG               GGTGCTGTTGAAAAA  80 55
        melA 4313762 .. 4313782 -  -6.1  -3.64599   TTAGTAGAGGTTAAA            CGCCGGA TCTGCCG TCCAGCG            CGGCTGGAGATTAAC  62 36
        melB 4312182 .. 4312195 -  -3.7  -3.91488   AACTGCGCGAAATAA               CCTGG CAGG CCCGG                CGTTCTCCCGGGCCG  57 109
A1D48_RS22000 NONE
        dmsB 4302581 .. 4302591 -  -3.2  -2.53382   ACCAGCGGTAACTCA                 TGCA TGG CGCA                 CCTCCCGAATGTTCA  42 12
A1D48_RS21990 4301812 .. 4301823 -  -2.2  -4.58283   TAAGCCGGGCAAAAA                CTAC ATTG GCAG                 CGTCCACAGATTGTA  61 14
A1D48_RS21985 4301068 .. 4301096 - -12.5  -3.92592   AGCTGTAATAGTAAA       CTGTGCCCGCTG ACGCAA CAGCGGGCAC-G        ATGGCGGCACAAGTA 100 73
A1D48_RS21975 4298263 .. 4298282 - -10.7  -5.97575   AATTTATAAAAAAAA            GCGGCAG ACTACG CTGCCGC             AAATATGAGGAGGAC 100 194
A1D48_RS21960 4296983 .. 4296993 -  -3.2  -4.05629   AGGAAATTGAAACAA                 GAGA ACA CCTC                 ATTCAGCGAAGTTTA  56 507
A1D48_RS21935 4293961 .. 4293972 -    -3  -3.71848   TTTCTTTATTAATAA                CTAA TATA TTAG                 TTTTAATTTTTGCGA  52 505
A1D48_RS21910 NONE
A1D48_RS21905 NONE
A1D48_RS21900 NONE
A1D48_RS21895 4287467 .. 4287480 -  -8.1  -2.62184   TTTCCTCGGAGACTA               GTGCC CGCA GGCAC                TAGTATTAGTAGTAA  59 45
A1D48_RS21890 NONE
A1D48_RS21885 NONE
A1D48_RS21880 NONE
A1D48_RS21875 4284050 .. 4284079 - -12.9  -3.03169   AAAGAGTAAAAAGAT       TATCAGGCGTCGG GATG CCAACGCCTGTTA        GAGTCTTATGCCAGC  86 31
        fxsA 4273724 .. 4273765 - -12.4  -2.77861   CGAAGCGAAAACGCA TGGCGTAAGACGC-ATCCG CTGGC CGGATAGCGCCTCACGCGA CTTATCCGACCAACA  82 50
A1D48_RS21815 NONE
        groL 4270068 .. 4270103 - -18.4  -4.37971   AAAAGATGACTAAAA    GAAAAACCCCCGGTCA TTTC TGCCCGGGGGTTTCTC     AATTCTGGGAGATAA 100 153
A1D48_RS21805 4269599 .. 4269629 -   -17  -2.79809   GAAAAACGCTAACCA       TATCGCCCTCTGAA TCT TTCAGAGGGCGTTA       CGATTCAGACATATC 100 39
         efp 4266781 .. 4266802 - -12.3  -3.01831   GCGCGAAAAATAGGA           TGGCGCAGC ATAC GCTGCACCA            TTTTTCCCGATAACG  83 45
A1D48_RS21785 NONE
        ecnB 4266335 .. 4266372 -  -8.6  -4.36914   TGCTTCCGGATAAAA   TCGATTAACGGTACGAC GCCAT GCCGTACCGTTGAT-GA   TTACTGCTGAGCTCT  84 26
A1D48_RS21765 4265087 .. 4265098 -  -5.8  -4.93877   TCTGAGGAAATAAAA                CAGC AAAT GCTG                 GCCGTCGCGACCCGG  83 108
        epmA 4259880 .. 4259896 -  -9.4  -4.43221   AAATATGCTACAAAA              TGGCGC TTATT GCGCCA              TTTTATCTCGCGAAA  86 56
        yjeM 4258170 .. 4258191 -  -2.1  -2.91395   ATCCTTTTCATAAAG           CCGATGAGC TAAC GCTATCCGG            ACAAAGATTACTCCG  41 33
A1D48_RS21725 4257741 .. 4257756 -    -6  -4.09685   CGTCAGCGGGTAAAA              CCAGCC GCCC GGCGGG               GAGTTTGTAAACGCA  68 102
A1D48_RS21705 4251296 .. 4251317 -  -8.7  -3.96624   TATTTGCAGGATAAA           CAACAAGCG ATCA CGCCTGTCG            CCTATGACAGCTATC  76 365
A1D48_RS21695 NONE
A1D48_RS21690 NONE
A1D48_RS21685 4249712 .. 4249727 -  -4.6  -3.14132   TGCGCCGTGGAGTAA              TGCCGT CATT ACGGCG               CTGGAAAGCCGCAAG  50 457
A1D48_RS21675 NONE
        tsaE NONE
        amiB NONE
        mutL NONE
        miaA NONE
         hfq 4242183 .. 4242217 -  -7.2   -3.6279   AAACCCTCTTAATAA    CCA-G-CGGGGGCG ATTATCCGA CGCCCCCGACATGG    ATAAACAGCGCGTGA  67 43
        hflX NONE
        hflK NONE
        hflC 4238341 .. 4238376 - -14.2  -4.37092   ATCGCCCTTATAAAA    GAAAACCACCGGCATCC TTT GGATG-CGGTGGTTTTG    CTGGTCTAAAACCGC 100 51
A1D48_RS21630 NONE
        purA 4236573 .. 4236595 -  -2.6  -3.97947   TGTATTGATGATAAA           CCAGCCACCT GTC AGGCTGCTAA           TTTATTTCGGTTCAG  54 155
A1D48_RS21620 NONE
A1D48_RS21615 4233590 .. 4233610 - -11.2  -2.64877   CCTACAGATAATTCA            CCCTCTTC TGTTT GAAGAGGG            TATTGCTCACTCTGC  77 32
        rlmB 4232751 .. 4232768 -    -7  -6.32216   AGAGATAAAAAAAAA             CCATCC GATTAT GGATGG              TTTTTTCTTAAAAAA 100 52
A1D48_RS21605 NONE
A1D48_RS21600 NONE
A1D48_RS21595 NONE
A1D48_RS21590 NONE
A1D48_RS21585 NONE
A1D48_RS21580 NONE
A1D48_RS21575 NONE
A1D48_RS21570 4225709 .. 4225723 -  -6.4    -3.737   TAATGTTGCAGGAAA               CCCACA GGA TGTGGA               GCGGATTATCGCCCT  60 185
A1D48_RS21555 4223645 .. 4223670 -  -2.6  -4.12188   GCACCAGGCGCAAAA         TCACGATG AAAAAGTACG CATCGCGA          AAGCGGCGTCGCAGC  56 525
        ulaA 4220482 .. 4220496 -  -2.8  -4.48987   CGGTCATAATCAAAA               CTCCTT ATT AAGCAG               ACTGTTCTGCCAGTT  63 18
        ulaB 4219861 .. 4219871 -  -6.8  -2.56271   TGGTGATCAGAATAT                 CGAC CGG GTCG                 TTATCTTCGTGGTTG  55 322
        ulaD NONE
A1D48_RS21520 NONE
A1D48_RS21515 4217449 .. 4217459 -  -6.8  -2.93901   ATCTGACCAATTACA                 TCCC TGA GGGA                 TAGGATCCCGGAGCG  56 46
A1D48_RS21510 4216558 .. 4216572 -  -8.6  -3.38046   TGCTCAGCGTAAATA               CAATGG CAG CCATTG               AAATTGATAATCGTC  64 288
        rpsF NONE
        priB NONE
        rpsR 4215158 .. 4215168 -  -2.4  -2.50307   CAAAGTCGTATTAAT                 GGAC CGT GACC                 GATTACTGATGGCGA  39 28
        rplI 4214625 .. 4214653 - -13.2  -3.60316   ATGGGGTTAAAAAAG        CAAAACGCCGGC GCTGG GCCGACGTTTCG        TTGCTAGCAAAAACG 100 52
A1D48_RS21480 4213253 .. 4213266 -  -5.9  -3.32865   GGAAGAACAAAACCA               GCCGC AGAC GCAGC                CTTTCCAGCAGGATA  56 365
A1D48_RS21465 4212032 .. 4212072 -   -17  -2.52676   CATCTGCTGAAGTCA GGGTTGCCGGATAA-GGCG TTTA CGCCATCATCCGGCAAACC  CGGGGCGCTTACAGA 100 34
        cycA 4210266 .. 4210293 -   -12  -2.76696   TGGCCGGGGAATAAT        CGCCAGCCGGGCA TTT TGCC-GGATGGCG        GCTGTAAACTGCGCC  79 108
A1D48_RS21440 4206905 .. 4206921 -  -5.8  -3.78934   GGCGGCGGATAATAA              CTGGCG TCTGG CGCCAA              TCCACAGCGATACGG  63 235
        cysQ 4203652 .. 4203668 -  -7.9  -3.67498   TAACCTTGAAGATAA              CCAACGG GTG CCGCCGG              TAGGCATTGCCGACC  65 479
A1D48_RS21410 4202982 .. 4203002 - -16.9  -3.50335   TGCCAGAAACATCAA            CGGCTCCTG ATT CAGGAGCCG            TTTTTTTTACTTTTT 100 65
        tamA 4198858 .. 4198868 -  -4.6  -2.62316   TAAACTCATAATTCA                 GGCC CCA GACC                 GATATAAAACTGTAA  46 5
        tamB NONE
A1D48_RS21385 4194696 .. 4194718 -  -9.9  -5.55698   CAGAATGTAAAAAAA          CAACGCCACC CGAG GGTGGCG-TG           TTCAGTTCAGGGCTG 100 32
         mpl 4188420 .. 4188435 -  -2.4  -4.29977   AAAGAAGGCAACAAA              CCGCCG AAAT CAGCGC               GTCAGATTTTCCAGT  60 179
        pmbA 4186434 .. 4186470 -    -8  -3.65201   TAATACCCTGAATAA   TTCGAGTTGCAGGCAGC CAAC GC-GCCTGCAGCCTGAA    GTATGACGGGTATTA  69 38
        cybC 4185947 .. 4185996 -  -6.5  -2.79183   GTGATGGGTATTACA GTTTGCCGGATGGCGACCT-GC GGATAAA GCGAAGCCGCCATCCCACAAAA ATTAACGATACTTCT  53 27
A1D48_RS21340 NONE
A1D48_RS21335 NONE
A1D48_RS21330 4184707 .. 4184720 -  -3.1  -5.06414   CCTTTTTAATAAAAA               TCAGCG TTT CGC-GA               CGAAATCCACCCTGT  74 12
A1D48_RS21325 NONE
A1D48_RS21320 NONE
A1D48_RS21315 NONE
A1D48_RS21310 NONE
A1D48_RS21305 NONE
A1D48_RS21300 NONE
A1D48_RS21295 NONE
A1D48_RS21290 4177171 .. 4177209 -  -6.7  -3.42996   CATCAGGCATCACAA  TGT-TGCCGGATGCGGTG CAAG CACCTTATCCGGCCTACA   TGCTTTCTGGACACC  62 513
        mgtL 4170090 .. 4170119 - -12.1  -2.87564   TCACTGTCTTACACA       CCGGTAAGACAGC AGAG GCAGGCTTACCGG        AAAAGGAAAATTCTC  80 19
        mgtA 4166864 .. 4166876 -  -2.7  -4.45544   CGCCAGGAATTAAAA                CAGAT AGA ATCTA                CCGCGAAGATAGTCT  64 413
A1D48_RS21185 4157534 .. 4157544 -  -4.6  -4.41633   CATGGCGAAAAAGAA                 CGGC GGC GCCA                 TCACCCTGACCGAAG  68 467
        rraB NONE
        miaE 4155396 .. 4155407 -    -3   -3.3517   ACTCAGGACAGAATA                TCAT GAAA ATGA                 CTTTTTCTGCTCGCC  46 120
A1D48_RS21155 4152374 .. 4152391 -  -7.7   -3.9712   CCAGCCGATGACAAA             GGTC-CGG TTT CCGTGACC             AAAATCATCGACGGC  71 422
        lptF NONE
        lptG 4144982 .. 4144992 -  -2.4  -4.18762   AACGCGTAGCCAAAA                 GCGC CAC GCGT                 CAGGTTACGCACTAC  57 156
        idnK 4139548 .. 4139565 -  -5.5  -4.14392   CCGGAAGCGTTAAAA             GCACTGG CGGG CCAGTTC              GATCTCATTATTAAC  65 377
A1D48_RS21085 4138467 .. 4138480 -  -5.2  -5.72622   TTTATAAACAAAAAA               GCCG GAGATG CGGC                CATTTTGTAGTTGCC 100 108
A1D48_RS21050 NONE
A1D48_RS21045 NONE
A1D48_RS21040 4126238 .. 4126269 - -14.7  -3.25717   ATTATAGATAAGATA      TTCATAATGGCCA GAGTAT TGGCCATTATGAA       ATAAATTATATTAAT  95 36
A1D48_RS21015 NONE
A1D48_RS21010 4120642 .. 4120668 - -12.3  -3.80533   AAAATAATATAAACA         GATCCCCCGGA ATTTA TCCGGGGGATA         ACAGAATGAAATTAT 100 41
A1D48_RS20990 4117680 .. 4117700 - -12.7  -3.07431   AAAAGAGCTTGAATA            CTGGATGAA TTT TTCATCCAG            AAAAGATGACGTGTT  83 61
A1D48_RS20985 4117402 .. 4117414 -  -4.9  -3.80026   GAATCAAACAGACAA                TTGAT TGA ATCAA                GTCACTTTTTGGAAG  59 86
A1D48_RS20980 4116001 .. 4116012 -  -2.2  -2.90496   CTCTCGTTCAAAGCA                GACT GTCA AGCC                 GGATAGTGACTATAA  41 72
A1D48_RS20975 4114693 .. 4114706 -  -3.8  -4.33203   CAAGAGAATAAATAA               TGCC GTAAGT GGCA                TTGAAGAAAGTGGAA  64 216
A1D48_RS20860 NONE
A1D48_RS20855 NONE
A1D48_RS20850 NONE
A1D48_RS20845 NONE
A1D48_RS20840 4086874 .. 4086889 - -10.4   -5.9873   GCATCACAAAAAAAA              CCTCGC TAAA GCGAGG               TTCTGTGCATAATTA 100 160
A1D48_RS20800 4078143 .. 4078185 - -15.3  -2.74514   GCAAACCTCTAATTA TAAATTAAACAAATCTGTC TCTAT GGCAGATTTGTTTAATTTA TAAAGCTGTTATAAA  93 459
A1D48_RS20760 4073549 .. 4073562 -  -6.7  -4.53737   CAACAGAAAAAAATA               CGCTA TGAA TAGCG                CCACATTACTCTAAT  77 337
A1D48_RS20755 4072521 .. 4072551 -  -2.5  -5.55664   TCATCACTAAAAAAA       CAGACGGCACAAC AAAAA ATTCCGACGTCTG       AACAAATTTAAATAA  83 79
A1D48_RS20750 4071780 .. 4071793 -  -3.7  -4.08394   ACAGGCGCTGGAAAA               GCGCC CCCG GGTGC                AGTGTAAAATGTACG  60 171
        uxuR 4070109 .. 4070129 -  -8.9  -4.45544   CTGCAGGAAGTAAAA            CGTGGACTG GGT CTGCCCACG            CTATTCCAGGTATAA  88 41
A1D48_RS20725 4067680 .. 4067701 -  -3.1  -3.92522   CGTCAAGGTCAGAAA           CACACTATCA ACT TGAT-GTGTA           TATAAAAAATGCCGT  55 208
A1D48_RS20715 4066907 .. 4066917 -  -4.6  -3.53091   AGGCCGCGCTGTAAA                 CACC TCA GGCG                 GTAAGGCGTTGTTCC  54 19
A1D48_RS20675 4057221 .. 4057241 -  -6.7  -3.07104   CGATAATTATAGAGA            GCGTTGCCC GGT GGGCACCGG            GCCTGCAACATTCAG  58 53
A1D48_RS20670 4055582 .. 4055594 -  -4.8  -4.84761   ATACCGGGATAAAAA                GCAC GGTTA GTGC                AACGTGGATAAATAA  77 149
A1D48_RS20660 4055020 .. 4055031 -  -5.8  -3.60296   GAGGTTCAGTTTAAA                GAGC TTAA GCTC                 TATGACGCCTTCCGC  57 342
A1D48_RS20625 4046793 .. 4046840 -  -4.9  -4.00132   AAAGTTAAAAGAGAA TGTCATATATGCCGGGT--GGCG GCTG CGCCTTACCCGGCCTACACATCA TCTTTATCAATAAAC  61 140
A1D48_RS20590 NONE
        bglJ 4038986 .. 4039032 -  -7.9  -3.62046   GGATTCCCCGAACAA GCACGGCGCATCCGGC-GCGGGC TAT ACCCGATGCTGGA-GCGCGGTAC CATCTCCGGCGCGCA  69 0
A1D48_RS20565 4035474 .. 4035487 -  -3.9  -3.37344   GTCCCATGCAATTAA               CTATT GACG AATAG                CTGAAAACCACTAGA  50 434
A1D48_RS20540 NONE
        rimI NONE
A1D48_RS20530 4032711 .. 4032721 -  -6.8   -2.8805   ATCAGTGTTTACACA                 GGAG CTG CTCC                 AGTTCGCTTAATGAC  56 1
        prfC 4030986 .. 4031005 - -16.4  -3.33483   CAGGGAAAGTACGAA            GGCGCGGC GGAT GCCGCGCC             CGGAAAGGGATCAGT 100 36
        osmY 4029958 .. 4029984 - -14.5  -2.62184   GTGTGGTGCACATTA        CG-CCTCCCGAC AAAC GTCGGGAGGACG         AATTACGACGAATTA  87 38
A1D48_RS20515 4029658 .. 4029676 - -14.6  -4.28049   GCTAAAACCGTAAAA             GCCAGTCC GCT GGACTGGC             TTGATAGCAATATAT 100 56
A1D48_RS20510 NONE
A1D48_RS20505 4027609 .. 4027620 -  -5.8  -3.75629   TATGGCGAAGCGAAA                GCCT GGCC AGGC                 GCGACGCCGCAAGAG  61 145
        deoC 4024277 .. 4024295 -  -3.9  -2.73124   CGCCATCCGGCAAAT            CAG-AGCT TAGT AGCTGCTG             GCGCTCTTACCGTCG  45 13
        deoA 4022818 .. 4022828 -    -4  -3.23855   TGCTTCAAAAATAAT                 TGAT CAG ATCA                 GTATACAACTATTCA  48 34
        deoB NONE
        deoD 4020597 .. 4020629 - -12.1  -4.49556   TGCTGACGAAATAAA     CGATGAAGGGGGCC TGCTCT GGCCCCCTTCA-CA      ATCTTACTCTTTATC 100 29
A1D48_RS20425 NONE
        radA 4010784 .. 4010796 -  -5.5  -3.30124   CCGTAGGCCGGATAA                GACGC ATT GCATC                GCCATCCGGCAAATT  56 66
A1D48_RS20415 4009338 .. 4009382 -  -5.6  -4.42806   GTATTGCCAAATAAA TGTCTGAATGCCGGGT-GGCG CTTG CGCTTACCCGGCCTACAAACC CAGCGATTCCAGTAC  70 97
        sltY NONE
        trpR 4004692 .. 4004710 -  -5.9  -3.72576   TGCTGGCGCACGAAA             TCGCGTG GATAA CGCGCGA             CGCCTGCATCCACAA  60 454
        gpmB 4003545 .. 4003555 -    -4  -3.23692   GACGATGAGCAGGAA                 GTAT TCT ATAC                 CACCGCACTGCCGCA  47 296
        creA NONE
        creB NONE
        creC NONE
        creD 3998620 .. 3998640 -  -5.3  -4.46212   CGCGCTACTATAAAA            CCGCCGCCA CGG TAACGGCCG            GGCAAGCGAATGCCA  70 127
A1D48_RS20310 3990063 .. 3990075 -  -3.4  -3.73968   AAATTTGTGATGAAA                GCTA GCATT TAGC                TACGATGATTTCATC  53 122
A1D48_RS20305 NONE
        thrL 3988760 .. 3988782 -   -12  -5.75342   CTGGTCGAAAAAAAA           GCCCGCAC TGTTCAG GTGCGGGC           TTTTTTCTGTGTTTC 100 41
        thrA NONE
        thrB NONE
        thrC 3983840 .. 3983855 -  -3.2  -4.21194   TTTTATTATTGAAAA              CCGCTT AACG AAGCCG               GAACAGCTTACCGCG  58 212
         tal 3980452 .. 3980462 -  -5.4  -2.68487   TTAATGATTACAGCA                 GATC GCC GATC                 ATTTTTTCCAGTTTT  50 7
A1D48_RS20265 3979649 .. 3979669 -  -3.9   -2.5934   TGCTAAACGAGCAAT            TTGGCCGCA CTA TTCTGCCAA            TCGGCGAGGCGCACT  44 99
        dnaK 3975489 .. 3975531 - -16.2  -3.01924   TATCTGCCCTTAACA TGCATGCACGGGCGGAGAGG AAA CCTCTTCGCCCGTGCCAGTA ATTACCCGTTCAAAG 100 46
        dnaJ 3974281 .. 3974300 - -11.4  -5.29782   TACAGGCAGAAAAAA            GCCCGGAT ATAC ACCCGGGC             TGAAGAAAAATACAA 100 52
A1D48_RS20235 3972988 .. 3973000 -  -4.9   -3.6106   TTTAACACTCCGAAA                TCATT ATA AATGA                ATAATTAACACAAGG  57 124
A1D48_RS20230 3972594 .. 3972609 -    -9  -4.16146   AAAAGACGCGTAAAA              GGCTCA CGGA TGAGCC               TGATACTGCGAATGA  82 44
A1D48_RS20215 3969029 .. 3969046 - -14.1  -4.36914   CCCTGGTGGAGAAAA             GCCCCGG TAAA CCGGGGC              TTGAATCATGAAGCC 100 67
A1D48_RS20210 3965931 .. 3965960 - -15.9  -4.63218   GGGGGCGCAAGAAAA       GAGATTCGAAAGC ACGC GCCTTCGAATCTC        AAACTAATAGTCCAG 100 64
A1D48_RS20205 3964938 .. 3964948 -  -2.6  -4.31835   AACCTTCATAAGAAA                 TTTT AAT AAAA                 CATTTTATTAACGAT  60 91
A1D48_RS20200 3964028 .. 3964046 -  -5.3  -5.69473   CAGACGAGAAAAAAA             TCCCGAT AAGGA ATCAGGA             ATAAACCATGCTAAA 100 20
A1D48_RS20195 NONE
A1D48_RS20190 NONE
A1D48_RS20185 NONE
A1D48_RS20180 NONE
A1D48_RS20175 NONE
A1D48_RS20170 3957809 .. 3957828 - -11.4  -3.68261   CGATAAGATCGGAAA            GCCTCCCG CTAT CGGGAGAC             GCCTGAAAAATAGGT  87 40
A1D48_RS20165 NONE
A1D48_RS20160 3956116 .. 3956130 -  -5.8  -4.21773   CGTTAAGAGAAATAA               TATCAT TAC ATGATA               AAAAAGTGCTAAAGG  67 502
A1D48_RS20150 3954580 .. 3954613 -  -2.5  -5.54338   CAATGAAAAGAAAAA     TCTCCCCTCTTCTTT AAAA AAAGAAGAGTATAAA      TATATAGCATTATTT  85 96
A1D48_RS20140 3951960 .. 3951990 - -14.8  -3.49938   GCAAATAAGCCATAA       TGTTATGCGGTCGA TAA CCGGCCGCATAACA       TACTTAGTTATGCAA 100 33
A1D48_RS20125 3947354 .. 3947389 - -11.2  -4.86731   TTCCCTGAAATAAAA    GAACCTGATCCGG-CAC AGA GTGACCGGATCAGGTGG    GCATCGCCCTAAGTG 100 69
A1D48_RS20120 3946119 .. 3946137 -  -3.9  -3.81948   TAATGTGAGAAAACA             TATTCAC TCCCT GCGAATA             CTACCTTCAAACAAA  55 32
A1D48_RS20115 3944753 .. 3944810 -  -7.2  -2.98447   GTATTCATGATAAAT CTCCAGTGTATTAA-TCTCATCGCCCC TCATG GGGACCACGAAAATTAATACTCTGGAT TTTTAAGCCGTCCGA  59 87
A1D48_RS20110 3942978 .. 3942995 -  -9.1  -3.56704   TTTTTACGAAATGAA             GTCCGAC TTAC GCCGGAC              TTTTTTAGTGCAGTC  73 60
        nhaA 3941668 .. 3941679 -  -5.8  -2.53213   CAATGTCGCAAGGGA                GCGA TACA TCGC                 TCCCCCTTTCCTTCG  49 47
        nhaR 3940691 .. 3940721 - -18.4  -2.83747   GAACTTGTAGAATGA       TTCCGGCTGCGG GCTAGTT CCGCAGCCGGAA       GTATTACGGTAGGTA 100 44
A1D48_RS20080 NONE
        ribF NONE
        ileS NONE
A1D48_RS20065 3931760 .. 3931803 -  -5.3  -4.64157   CAAAGAACGATAAAA CCGTAG-GCCGGATAA-GGCG TTTT CACCGCCATCCGGCACCACGT TTGCCTGATGGCGCT  73 90
        fkpB NONE
        ispH 3930138 .. 3930172 - -12.4   -3.4252   CTGTAGGCATTACAA     CTAAAAAACCAGCA ACGATTG TGCTGGTTTTTCAG     ATGAATAGCAAAAAG  93 164
A1D48_RS20050 NONE
        rihC 3927882 .. 3927913 -  -7.2  -4.40963   AGGCGTGAAAAATAA      CTTTCTCGAAGCGG AGAT CAGCTACGGGAAAG       TGGGCAGGCCGGAGA  79 85
        citC NONE
        citD NONE
        citE 3918207 .. 3918217 -  -4.6  -3.20227   CCTTAATCACGAATA                 CCGG AAG CCGA                 CAGCGCCACCACTTT  50 2
        citF NONE
        citX NONE
        citG 3915174 .. 3915197 - -12.6  -3.45743   TATCAGTAAAAGACA          TGATTCATCC CACA GGATGAATCA           TTGCTGGAGAGAATG  93 54
        dapB 3914152 .. 3914170 - -11.8  -5.55855   GGCAAAAAAACAAAA             GGGCAATA ATA TATTGCCC             TTTGTAATCAATTAA 100 80
        carA NONE
        carB 3908895 .. 3908914 - -10.8  -5.80817   CGCAAGATAAAAAAA            GGGTTTCT TTAC AGAAACCC             TTTCAACATTATATT 100 79
        caiF 3908170 .. 3908195 -  -9.7  -4.64676   GCAGGTCGAAGAAAA         CCGACCGCGCCT GAA AGGCACGA-CGG         ACGTGAAGCCAAAGT  91 129
A1D48_RS19920 NONE
A1D48_RS19915 NONE
A1D48_RS19910 NONE
        fixX 3897113 .. 3897171 - -14.4   -2.5805   AGTAGGCCGGATAAG GCGTTTCCGCCGCCATCCGGCATTGGCG CCA CATGATTGCCGGATGGCGACGCTACCGC ATCTTATCCGGCCAA  87 63
A1D48_RS19900 NONE
A1D48_RS19895 NONE
A1D48_RS19890 3894519 .. 3894533 -  -2.7  -3.38535   TGAAATAATAAGAGA               GCGCC AGCAA GGTGC               CATGTTCCGTCACAA  46 186
A1D48_RS19875 3891228 .. 3891264 -  -9.3  -3.61988   CGACGCATAAATTAA    CCTAATGGGTCAGGTAC TTA GAGCCTGGCCCACCAGG    CGTAATTGTTGAAGC  75 153
        kefF NONE
        kefC 3888261 .. 3888277 -  -2.3  -2.80195   ACTGATCATTAATTA              TTTCCTG ATA CAAAAAA              AATTGCCGCCACTAT  40 201
        folA 3887732 .. 3887770 - -13.3  -3.02263   ACATCTGGCTCAAGA  GTAG-GCCGGATAA-GGCG TTT CGCCGCCATCCGGCACTAC  AGCGTTAACGACGTT  86 30
        djlA 3879494 .. 3879505 -  -7.2  -3.73072   AAGTGTGTTATGAAA                CCGG CAAA CCGG                 CGCAAACGGAATATA  65 377
A1D48_RS19785 3871846 .. 3871856 -  -2.4  -2.72144   TGACGCCGCTCAAAT                 GCCC GGC GTGC                 TTGTCCATTCGCACG  39 228
        araC 3866714 .. 3866726 -  -4.8  -3.15544   CGTCAGCGTGATGAA                GCAG GGATT CTGC                TTACCCCGTCCCCCT  52 108
A1D48_RS19760 3865894 .. 3865905 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG AAGC CGCC                 ATCCGGCAAAGGAAT  63 43
        sgrT 3860489 .. 3860511 - -16.4  -5.95539   GCCGAAATAAAAAAA           GCCAGCAGAT ATT ATCTGCTGGC           GGGTGATTTTAGGCT 100 87
        leuO 3853738 .. 3853774 - -16.2  -4.65838   TATATACGCTAAAAA    GCAGAATAAACCAGAA TTTGT TTCTGATTTATTCTGC    CCGGTTTTATCGCTT 100 32
        ilvI NONE
        ilvN 3851092 .. 3851117 -  -7.6  -5.75945   ATTTCGCAAAAAAAA         GCCCAACC GGTGATATTG GGTTGGGC          GATAATTCCTGTTGG 100 149
         cra 3849571 .. 3849588 -  -3.4  -4.07885   CACCGCCGTTTAAAA             CGGACT CAATAT AATCCG              AGAAAAATATAAAGT  57 390
A1D48_RS19685 NONE
        rsmH NONE
        ftsL NONE
A1D48_RS19670 NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG 3838273 .. 3838290 -  -3.3  -3.01422   CACCGCCACAAATTA             TGTCCGGG CAA CCCGG-CT             GACTTCACTGGCGAC  45 5
        murC NONE
A1D48_RS19630 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ 3832389 .. 3832410 -  -6.7  -3.09208   AAATTACCTATCCAA           CCGAAGTGTA CTA TACA-TTCGG           CGGGCCAGTTTAGCA  58 75
        lpxC 3831374 .. 3831417 - -10.3  -5.90981   GGATAGTAAAAAAAA CGACTGGCTCGCCTGGC CGGAGAGAGT GCCAGGTTAACCAGTCG AATTTTATACGACAA 100 50
        secM 3830620 .. 3830636 - -11.5  -2.79175   AATAAAGTCTCAAAT              GCCCCGC GCC GCGGAGC              TACAAATAAAGTAAA  77 55
        secA 3827764 .. 3827781 - -12.7  -5.28176   TGCATCCATAAAAAA             GGCGCAG TCGC CTGCGCC              TTTTTATCTGTGTTC 100 143
        mutT 3827320 .. 3827350 -  -5.3    -3.409   AAATCGCTAATAAGA       TCGATGGGGATCG TGTTG CGATCCCCCACTA       AGGCGCAAATTGGCG  54 23
A1D48_RS19585 3824823 .. 3824836 -  -8.1   -3.7108   ACGCCCAGATTGAAA               GCTGG CTTG CCAGC                CTGAATCCCCTCACC  68 487
A1D48_RS19565 3822438 .. 3822461 - -14.6  -3.32963   AGCGGGATGGGATAA          GGCTGGCGCA CATT TACGCCAGCC           AGAATATTAGAGGCT 100 32
        ampD NONE
        ampE 3816662 .. 3816686 -  -2.7  -4.25104   GCGCTGGGACGAAAA          CGGGATGCC TGATTTC GGCGTGCCG          CCAGCCGATACGATC  58 135
        pdhR 3811381 .. 3811394 -  -5.3  -3.72695   ACCTGTCCCATTAAA               CTTTC GTCA GAAAG                CTTAATAAGACAGGT  59 115
        aceE NONE
        aceF 3806731 .. 3806748 - -14.1  -5.88471   GATTATCAAAAAAAA             GCCGGCC GTCG GGCCGGC              TTTTTCGCTTACATC 100 34
        lpdA 3805077 .. 3805092 - -10.4  -5.64274   CCATGCATAAAAAAA              GCGGCT GTAA AGCCGC               TTTTTTGTATCGGGT 100 64
A1D48_RS19490 3804221 .. 3804240 -  -4.9  -4.67234   AGCGAAGGCCAAAAA            GATGGCC TGTACT GGCCAAC             CAAAGCAGGCGACGT  71 343
        acnB 3799074 .. 3799095 - -11.5  -4.56597   TCTTCGCTGTAAAAA           CTGGCCCGG AAAT CCGGGCCAC            TCACTTTTATACCGC 100 32
A1D48_RS19460 NONE
A1D48_RS19455 3796521 .. 3796537 -  -6.6  -4.98857   ATTTAAGCAGAAAAA              TTTCCG GCCTG CGGAAA              ATCTGGCAGTGACGT  86 84
A1D48_RS19445 NONE
A1D48_RS19440 3794224 .. 3794238 -  -2.7  -4.25538   AATAATAAATAAGAA               GCGCC ATTCG GGCCC               GGGAATCCGGGCCCG  58 47
A1D48_RS19425 3792285 .. 3792301 - -13.7   -5.4505   TTCTGCAATAAAAAA              GCCGGGA TAC TCCCGGC              TGGAATGTGTGGTGA 100 107
A1D48_RS19420 NONE
A1D48_RS19415 NONE
A1D48_RS19410 NONE
A1D48_RS19405 3787663 .. 3787681 -  -6.6  -3.53012   GCCCGCTGCCGGAAA             CCGTGGTG GCG CACCTCGA             TAAGAGCCATATCTG  60 521
        cueO 3784136 .. 3784155 -   -15  -3.35358   CGAAATAACCATTAA            TGCCCGGC GTAT GCCGGGCA             TTGTGCCGGGTGGCG 100 76
A1D48_RS19375 3780874 .. 3780885 -  -2.2  -5.84381   CCACCAACAAAAAAA                CGCT GGAG AACG                 GCTATCATAAGGGTA  91 136
A1D48_RS19365 3779235 .. 3779248 -  -3.1    -3.794   GGGCAACCCAGTAAA               GCTGCA TCA TGC-GC               GATCTCCTTGTTTTT  53 18
A1D48_RS19360 3778384 .. 3778442 -  -3.9  -3.14132   GTTGGGTTTCAGCAA GCCCCCCCCACCTACAGTCCCGTAAC-CC ATT GATATTACGGGCCCGTAGATGGGATGAA- GCGAGGTGCAACCCA  48 57
A1D48_RS19335 3772588 .. 3772612 -  -2.7  -5.28683   ACCAAGACGAAAAAA          CGCCGTTATTG TAG CAAAAGCGTCG          TCAATGGTATTGATC  76 39
A1D48_RS19330 3771266 .. 3771282 -  -2.1  -4.10453   CAAAGCTGGTCAAAA              CAGGGAC GGA GGCCGTG              ACACCCGGTATTTTC  56 78
        hrpB 3754307 .. 3754329 -  -4.2  -3.28368   AGGCAACGTATAACA          CGTCACGAA TACTTC TTCGTG-CG           CCGCGTTGGGGCCGT  50 5
        mrcB 3751621 .. 3751634 -  -5.9  -2.90392   GACCGGGTAAGCACA               GCGCC ACCC GGCAC                TATTACCGTGATTAA  51 37
        fhuA 3749134 .. 3749155 - -13.7   -4.1466   AGCCAACTTGTAAAA           CGGGCACGG CCAG CCGTGCCCA            AAAAGAAATTAGAAA 100 34
        fhuC NONE
        fhuD NONE
        fhuB 3745013 .. 3745029 -  -8.7   -3.7829   ACGAGATGCATTAAA              GATGCGG CAT CCACATC              TTAATATTTAAAAAG  75 382
        stfA NONE
A1D48_RS19205 NONE
        stfD NONE
A1D48_RS19195 NONE
        stfF NONE
A1D48_RS19185 NONE
A1D48_RS19180 3737927 .. 3737956 -  -8.5  -2.79912   TCCAAAAACAACGTA       GGCCGGGTAA-GGC GAA GCCGCCACCCGGCT       TTTTTTTGGTTCATC  64 70
        clcA NONE
        erpA 3734569 .. 3734580 -  -5.8  -3.28712   CTGTCGGCCGGATAA                GACG CTCG CGTC                 GCCATCCGGCACAAC  56 50
A1D48_RS19145 NONE
        degP 3729155 .. 3729189 -  -4.4  -4.52589   GGGTTTCACAGAAAA    GTGTTG-CCCCCTTCC ATGGA GGAAGGGGGACAA-AG    GTGATTACTGCATCA  69 30
A1D48_RS19135 3727780 .. 3727797 -  -6.3  -3.31263   AGCCGATCTGGACAA             GCTTACC CGTA AGTAAGC              TGTGTGTTGCCGGAT  59 112
A1D48_RS19125 3725836 .. 3725854 -  -8.1  -4.21275   TTAAGCGAGTGAAAA            GCGGGGGC GACA GCCCCC-C             TTTGCATTACGGCGA  76 32
        rpsB 3719896 .. 3719916 - -11.1  -4.89729   TATAAAAGTGAAAAA            GGGGGCC ATATACA GGCCCCC            TAACCAAACGTGATA 100 199
         tsf 3718950 .. 3718971 - -13.7  -4.61633   AGAGAGGCGCAAAAA           GAAGCCGCC CTCA GGCGGCTCC            TCAGGAAAATCAGGA 100 35
        pyrH 3717983 .. 3718001 -  -5.3  -4.11751   ACGAATCCTTGAAAA             CTAGTCT CAGTC AGACCAG             ACGGTCACACAATAC  63 135
A1D48_RS19080 3717299 .. 3717348 - -16.5  -5.16151   GAAACGGAATAAAAA GCAAAACGCCGCACAGGAGACCT GATA ATGTCTTCTGCGCGGCGCTTTGT ACACCACTCATCCGC 100 84
        ispC 3715947 .. 3715964 -  -8.4  -5.28176   TGTATCCACAAAAAA             GCCGTG TAAAAC CACGGC              TAACCTGACCGAAAA  95 130
        ispU NONE
        cdsA NONE
        rseP 3712759 .. 3712776 -  -2.7  -3.33696   GTTCTTCCTAACTAA             CTCTC TTACAACC GAGAG              AAATCATTGAAAAGT  46 13
        bamA 3710299 .. 3710312 -  -2.4  -3.24747   TCGCTACACTACCAA               TGCA TTCCTT TGCA                GTGAACAATTACCAG  44 34
         skp NONE
        lpxD 3708621 .. 3708654 - -13.1  -3.57992   AAGGCAATAATAACA     CGGCCTGCCGCAATC GTAT GAATGTGACAGGCCG      GAAAAGAATGGCAAC 100 55
        fabZ 3708124 .. 3708134 -  -4.6  -2.57136   TTATCAATCACGAAT                 CAGG CCT CCCG                 GCTACGAGCACACAT  46 14
        lpxA NONE
        lpxB NONE
        rnhB 3705593 .. 3705604 -  -5.8  -3.01243   TCGATACAAGAATCA                GGAC ACAA GTCC                 CAGAGCGCGTTTAAC  52 11
        dnaE NONE
        accA 3701069 .. 3701089 - -16.9  -5.75342   CTCGTCCAAAAAAAA            GAGGCCGGA TTA TCCGGCCTC            CTGGGAAAAATGAGG 100 48
A1D48_RS19005 3699133 .. 3699159 - -15.2  -3.79849   TAAGCATAGTAACAA         TCCTGCCGATGC AAA GCACCGACAGGA         TTTATCTTATTACAA 100 35
        ldcC NONE
A1D48_RS18995 NONE
        tilS 3694770 .. 3694785 - -10.4  -4.18018   GTCGGTCAGGGAAAA              GGCAGC TTAT GCTGCC               GCGAACTTACTGGTG  86 392
A1D48_RS18975 NONE
A1D48_RS18970 NONE
        nlpE 3692700 .. 3692720 - -16.9  -3.74077   CGGCAGATATGTAAA            GGCCTCGCA CCC TGCGAGGCC            TTTTATTAGTGGGTG 100 31
        gmhB 3686151 .. 3686165 -  -6.4  -3.12351   CTCTTTCAGAGTCAA               CCCTGA ATT TCAGGA               TTTTTCTCTTCAACC  56 169
A1D48_RS18925 3684363 .. 3684376 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
A1D48_RS18920 3684202 .. 3684217 -  -7.6  -3.17075   GCGTGGTGAAGCGAA              GCATAC TGAA GTATGC               GAGCTTTGCCACAAC  62 59
A1D48_RS18915 3684007 .. 3684040 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTCGTAAAC  69 51
A1D48_RS18910 3680842 .. 3680854 -  -3.3  -3.05816   TTATTGCGTACTCAA                CTCTG AAT CAGTG                CTGAAAATCATCTCT  45 56
         rrf 3680550 .. 3680565 -  -3.3  -2.82742   ATTCTTTTACAACCA              CTGAT TTTTAC ATCAG               TTTACTGCTTAATTT  43 44
A1D48_RS18900 3680421 .. 3680442 - -15.9  -5.31519   ACAGGCAAAGAAAAA           GCCCTGAGC TAAT GCTCAGGGC            TCTTAATAAGTGGCG 100 36
        dkgB 3679433 .. 3679450 - -11.3  -3.97043   GCGAATATATAAGAA             CAGCTCC CGCA GGAGCTG              TGAAAGAGGGGTAAA  91 60
A1D48_RS18885 3677171 .. 3677184 -  -3.8  -2.75481   CTGTAACGTCAACCA               GTCC TCAACC GGAC                TGGTTCTTCTGTTAT  45 111
A1D48_RS18880 3676290 .. 3676318 -  -7.3  -4.08042   GTTATGAGAAAAATA        TAGGGCAGTACCC GCA GAGGCCTGCCCCA        CGGCAGACCTGACTC  72 45
A1D48_RS18875 3675459 .. 3675479 - -11.1  -4.49644   ACGAAAAAGCCAAAA            GGCGCCG CTTCCCC CGGCGCC            TTTTAAATTGCTATA  93 36
A1D48_RS18860 3672280 .. 3672297 -  -3.3  -4.21989   CATAACTGGAAGAAA             CGCGGCT GGAA AACAGCG              GAAAAGAAACCCGTA  58 211
        dnaQ 3671216 .. 3671230 -  -2.8  -4.64766   TTTATAGCCTAAAAA               GGAATA AAT TATGCC               CGCCAAAGGCAACTT  65 19
A1D48_RS18845 3670942 .. 3670966 -  -8.6  -5.94597   GAAGACGAAAAAAAA          CCGTATCCCT TTTAC AGTGATACGG          TTTTTTTTACTTCAC 100 73
        tssH NONE
        tssB NONE
        tssC 3659086 .. 3659097 -  -2.2  -3.33583   ATAACAGCCGGACAA                CTGA CTTC CCAG                 GCTACAGCATATTGT  45 279
A1D48_RS18785 3658566 .. 3658582 -  -2.2  -3.61517   ATCCTTCTCCAATAA              CTTCAG GAGAA CAGAAG              ACTGTATATTTTTCC  49 162
A1D48_RS18780 3657944 .. 3657968 - -10.7  -5.10656   ATCAAAACAATAAAA          CCAGCCAGACA TAA CATCTGGCCGG          AAAAACAGCCGTTAA 100 37
A1D48_RS18770 NONE
A1D48_RS18765 NONE
A1D48_RS18760 3656158 .. 3656183 - -17.7  -4.71463   AATCAAAATAATAAA         TCCGGCCAGAT ATAA ATCTGGCCGGA          AAAACAGCCGTTAAA 100 36
        tssJ NONE
        tssK NONE
        tssL NONE
A1D48_RS18740 3652039 .. 3652057 -  -3.1  -2.81045   GCAGCGATAACATTA             TCACAGG GTATA CCTGTCA             CATTTCAGGCTACAT  43 133
A1D48_RS18730 NONE
        tssM 3647634 .. 3647644 -  -2.4  -3.40403   GCCGGCGCATTACAA                 CGCC CTC GCCG                 GACAACTGAAGTTCT  45 9
A1D48_RS18720 NONE
A1D48_RS18715 NONE
A1D48_RS18710 NONE
A1D48_RS18705 NONE
A1D48_RS18700 3644820 .. 3644838 -    -3  -3.28712   GTTCTGCTGCCAGAA             CCAGCC TTGCCCT GGCAGG             TAACGTATGCCCGGT  46 57
A1D48_RS18695 3643940 .. 3643951 -    -3  -3.48342   AATGAATGAGCAGAA                TACA TGTT TGTA                 TCATTTACCTACACT  48 26
A1D48_RS18690 NONE
A1D48_RS24565 3643119 .. 3643145 -  -3.7  -3.25823   TCCTGGCCACAGTAA        CGCGCGCCAGCGT CTT AC-CTGGC-CGGG        TCGACCACGGCAAAT  48 201
A1D48_RS18680 NONE
A1D48_RS18675 NONE
A1D48_RS18670 NONE
A1D48_RS18665 3634538 .. 3634563 -  -5.5  -3.97297   TGAATAATAAAAAAT         CCGGG-AAGA TTTAATT TCTTTCCCGG         CTTTTTTAATAAAAT  63 46
A1D48_RS18660 NONE
A1D48_RS18655 3633689 .. 3633718 - -10.8  -5.38549   GTTAAATAATAAAAA       GCCAGGAAGATT TTATAT AATCCTCCCGGC        TTTTATTTTAAATAT 100 33
A1D48_RS18640 NONE
A1D48_RS24560 NONE
A1D48_RS18635 3630504 .. 3630535 -  -5.8  -5.03961   AATTAAATAACAAAA      GAGCCGGGAAGA TTTAATTT TCTACCCGGCTT       TAATTCTAATTAATT  80 31
A1D48_RS18620 3628186 .. 3628213 -  -7.8  -5.72254   CTAAATAATAAAAAA        GCCGGG-AAGA TTTAATT TCTTTCCCGGC        TTTATTTAACTAATT 100 39
A1D48_RS18605 3625736 .. 3625749 -  -5.3  -4.02707   TAAAGACGTAAATAA               GCATT CACT AATGC                AATTATTTTCAACCA  63 279
A1D48_RS18595 3625351 .. 3625375 -  -2.8  -5.21236   AATTGATAATAAAAA         GCCGGGAAAAG ATAA CCCCTC-CGGC          TTTTACACATTATTC  76 58
A1D48_RS18575 3623189 .. 3623203 -  -2.2  -2.88638   AAAATTCATACCAGA               TTTTAC CGT ATAAAA               GTCATCTAAATTTTA  41 27
        tcfA NONE
        tcfB 3621831 .. 3621850 -    -8    -3.214   CGGATCAGATGAAGA            GCTAATAA CCGG TTATTAGC             CGGCAGTGACAGCCT  64 21
        tcfC NONE
A1D48_RS18555 NONE
A1D48_RS18550 3617344 .. 3617356 -  -3.5  -2.93073   GTTCCGTAAGAAGGA                TAATA ATG TATTA                AATCAGTAAGTACAC  44 50
A1D48_RS18545 3616305 .. 3616341 - -11.1  -3.11798   GCGTAAAACAAGAAC    CACACTCATATTAATAA TGA TTAGTAATGTGAGTGTG    CGTATAACGAGATAC  76 308
A1D48_RS18535 3615571 .. 3615585 -  -2.8  -5.07053   AAGCATTTCAAAAAA               TCACTA TGC TGGTGA               TGAACATACCGCTTA  76 105
        lpcA 3609808 .. 3609839 - -11.6  -2.87319   GGTAAGGGAGGAAAT      CCCCAGGAACATAG ATAA CTATGTGACTGGGG       TTTCTGAGCGCAACC  78 75
A1D48_RS18505 3608447 .. 3608459 -  -6.2  -3.55444   GGGTTAGGCCCGAAA                CGCC GTCAG GGCG                ATTTTAAAAGTCCGG  57 475
        dinB NONE
A1D48_RS18490 NONE
A1D48_RS18485 3604783 .. 3604805 -   -12  -3.10173   AGAAAGCGCTAAAAT           GCCCGTCC CATTTCT GGACGGGC           TAGCAATATGGAATA  81 144
A1D48_RS18475 3602565 .. 3602589 - -17.1  -4.78572   TTGTAACCAATAAAA          CAGCGCCCGGC ATT GCCGGGCGCTC          TGAAAAGCTGCTGAT 100 40
        frsA 3601277 .. 3601289 -  -2.7  -3.17586   ATCAATCTATTAACA                CAATC TAT GATTA                ATCCAGTCGGTAATT  45 7
A1D48_RS18465 3600469 .. 3600483 -  -9.2  -2.75267   AAACCCGCAACATGA               CGCCAG TTT CCGGCG               GATTTGCCAATAAAA  60 354
        proB 3598334 .. 3598347 -  -3.1  -3.18264   TTCCTTATCGAGTAA               TCATG TCAT CACGA                TGAACAGCGACCGGG  46 1
        proA 3596991 .. 3597004 -  -5.3  -3.30619   AATCACGGGGTAGAA               GGTTA AAAC TAACC                GGGCGGTGCGTCAAT  54 85
A1D48_RS18445 3596743 .. 3596753 -  -5.4  -2.86961   TGAGAATAGCGAAAG                 GCAT ACC ATGC                 AGAACGAATGCTTTG  51 145
A1D48_RS18440 3596214 .. 3596237 -   -14  -2.62613   TTTGATGGGAAATAT          TCAGGGATAC GATC GTATCCCTGA           GACAGGCCAGAATTC  86 39
A1D48_RS18405 3588833 .. 3588843 -  -2.6  -3.90328   GACAATGGCGATAAA                 TATT ACA AATA                 TAATCAGTAACGTTC  54 29
A1D48_RS18390 NONE
A1D48_RS18385 NONE
A1D48_RS18380 3584860 .. 3584870 -  -3.2  -3.20573   GCATTTAGATTAAGA                 GCAC CTA ATGC                 GCTTATTACCAGTCA  46 340
A1D48_RS18375 NONE
A1D48_RS18370 NONE
A1D48_RS18365 3583217 .. 3583236 -    -5  -3.06839   TCATTAAATAATAAC            GCGTTC TTGCTTCT GAACGC             CGTCAAGGAACTATA  51 28
A1D48_RS18360 3582759 .. 3582792 - -18.1  -3.61103   CAAGGTTAGCCCAAA     TAGCGCCCGCGTCGC CAGT GCGGCGCGCGCGCTA      AACAGGCATATATTG 100 55
        golT NONE
        golS NONE
        golB 3573370 .. 3573384 -   -10  -2.81088   AAGCGACGTAACAAG               GTAGCG TTG CGCTAC               TTATTTGTTATCTTT  71 216
A1D48_RS18325 3571980 .. 3572000 -  -6.8  -3.08211   AGGGCGTGAAAACCA            CGGGAGGA AGGCG TGCTCCCG            GCGACAGTATGCGCC  58 54
A1D48_RS18320 NONE
A1D48_RS18315 3566822 .. 3566850 - -10.2  -3.40299   TTAGTACAGGGAGAA        TGACCGCAACGC TCGCT GCGCGGCGGCCA        TTTTATATGGTCTAT  76 75
A1D48_RS18310 NONE
A1D48_RS18305 NONE
        cydB NONE
A1D48_RS18295 3563822 .. 3563848 - -18.8  -4.83169   ATCTGTCGATAAAAA         CGCGCTTTCGCC AGA GACGAAAGCGCG         TCCGGGGGGTATCAG 100 41
A1D48_RS18290 3562635 .. 3562646 -  -7.2  -2.62396   TAGCGGCGGATATTA                CCGC TCTG GCGG                 GGCGCGTTACGCACA  57 32
        foxA 3560158 .. 3560171 -  -5.9  -3.89346   CGCTTAGCGCAGAAA               CGCCC ACAT GGGCA                AGGTTAATGGCCTGG  63 253
A1D48_RS18275 3559177 .. 3559201 - -12.2  -3.72374   TGCCAGGAATAAATA         TACCCGCC-GG AAAC CCAGGCGGGTA          TTTTTATGATGCAAC  93 45
        prpB 3556253 .. 3556288 -  -8.2  -3.53811   CGTAGGCGGGTTAAA    CGTAG-TGCCATCCGGC ATT GCCTGATGGCGGCTTCG    CCTTATCAGGCCTAC  67 44
        prpC NONE
A1D48_RS18255 NONE
        prpE 3551137 .. 3551147 -  -8.2  -2.70932   CCTTTCCGTGAAGCA                 GCGG GTA CCGC                 GTTAAAAGGCGACCG  57 475
A1D48_RS18240 3547051 .. 3547074 - -15.4  -3.61715   CATTCCTTGCAATAA          TGCCCGTCAA GTCC TTGACGGGCA           TTTTTCAGTTTAAAT 100 69
        iprA 3546060 .. 3546075 -  -3.2  -3.65902   CCGATCGTATGCAAA              CGTTGA TTTA TCAGCG               CACACAGTTAAAGAA  51 359
        sbmA NONE
        yaiW 3542209 .. 3542222 -  -2.3  -4.08767   TTCACTCTCTCAAAA               TCGCT GTTC AGCGG                GAAGCATCGAGAAAC  56 334
A1D48_RS18205 3541638 .. 3541649 -  -7.2  -3.14344   GAGCTGGCGCAGGAA                CGCC ATAC GGCG                 AATAACGCCTTAAAA  57 78
A1D48_RS18195 NONE
A1D48_RS18190 3538378 .. 3538403 - -14.1  -3.03781   TTAATTTAAACCATA         TCGTAACGGCA GAAG CGCCGTTACGA          TGCACCGCTATTGGC  89 33
        iraP 3537743 .. 3537799 - -23.5  -2.82635   ACTGTTATTACCATA GCCGCTTCGTTTTTATTTTGCTCTG TATTACC CAGAAGAAAATAAAAACGAAGCGGC TATGGTATTTCATAA 100 80
        psiF 3537143 .. 3537176 -  -3.9  -3.85704   GGAGGAAGTATGAAA     TTTCGGGTGAG TGTTTTTCAGGG CTCACCCGATA      GCACTACGCCGCTTT  55 29
        adrA 3535804 .. 3535819 -  -6.8  -3.61371   AAATGGTACTCGAAA              CCGGAA AGCA TCCCGG               CGAACTGAAAGATAT  60 182
A1D48_RS18160 3534393 .. 3534406 -  -8.1  -3.14132   GCGTTCCCCCAGGAA               CTGCG CATA CGCAG                GATTTGATATCAGCA  64 176
        aroL NONE
        yaiA 3533573 .. 3533589 -  -2.1  -2.64877   TGGAGATACAATTTA              GGGGTAC TCA GAATCCC              TTCCGAGTGGTTCAT  39 45
A1D48_RS18145 NONE
        ppnP 3532289 .. 3532316 - -10.6  -2.90723   GCAGCGCTAACCAGA        GGGT-CCCTCTCC GCC GGAGAGGGGACTC        ACCGTTCCGTTACAA  75 35
A1D48_RS18130 3530012 .. 3530022 -  -6.8  -4.54047   TCAGCGGATACAAAA                 CAGC ATC GCTG                 ACTTTCGCGTTTATC  78 341
        phoB 3523685 .. 3523726 - -15.3  -3.85389   CCTCAAGAATGGAAA GCCTTCTCCGCCAG-AAACC TGT GTTCTACTGGCGGAAAAGGC ATTAAAAGCGGGTCG 100 27
        phoR 3522315 .. 3522336 - -13.1  -4.90525   TAACTGCAAAGAAAA           TAAGCCAGC ATCC GCTGGCTTA            TGGAAAGTTATACTT 100 52
        brnQ 3520591 .. 3520613 - -16.3  -5.64304   CAACACAATAAAAAA           CCACGGGGC GTTAA GCCCCGTGG           TGTACACATATGTCA 100 47
        proY 3519132 .. 3519184 -  -9.2  -2.66216   CTCCAGGAGGAGAAG CGGCTCCGC-TTATCCGGTCTACCG TTGC CTGCAGACCGGATAAGGCAGAGAAA AACGACTACGCCTGC  66 31
        malZ 3517158 .. 3517175 - -12.7  -4.42653   AGTGCATTGATAAAA             GGCTCGC GAAT GCGAGCC              TTTTTTATGCGTGCG 100 61
        queA 3514432 .. 3514458 -  -6.6  -2.72344   TCCGACGTTTAACGA         CTCGCTACGGAA TGA TTCCATAGCTAA         TAAATTCCCGAAGGC  55 155
         tgt 3513272 .. 3513288 -  -5.1  -3.54779   ATTAAAATTAATCAA              CGTTCAA AGG TGGAACG              GGTCGCCCCTGACGT  56 1
        yajC NONE
        secD NONE
        secF 3510008 .. 3510027 -   -10  -6.02914   GGTACATAAAAAAAA            TCCCGATC GCAT GACCGGGA             TTCAGATAACACTTA 100 50
A1D48_RS18045 NONE
A1D48_RS18040 NONE
A1D48_RS18035 3508105 .. 3508124 -  -6.4  -6.20267   TTAAAAACAAAAAAA            TCCCAACC TTGC GATCGGGA             TTCCAGTGACAATGT 100 209
A1D48_RS18025 3507691 .. 3507712 - -15.9  -5.07107   TAAACCTGCAAAAAA           GGCCAGAGG TCGC CCTCTGGCC            CGTTTCGGGCGCATG 100 75
        nrdR NONE
        ribD NONE
        ribE NONE
        nusB 3503217 .. 3503230 -  -3.7  -5.61277   CAGAAAAAAAGAAAA               GGCCG GAGA CGGCG                GGTATCATCCATCGC  88 64
        thiL NONE
        pgpA 3501349 .. 3501370 -  -5.3  -4.57569   TGACGTGGGCAAAAA           TTTATACGCT GAA AGCG-ATAAA           AATGATGCGCAAATA  73 369
        thiI 3495753 .. 3495763 -  -8.2  -2.61144   CGACCGTGGAAATAT                 CGCC GAC GGCG                 CGGCGCTGACCATTG  56 155
        phnW NONE
A1D48_RS17925 3489011 .. 3489055 - -13.7  -3.34517   ATGGCGGCGTAAACA CCTTATCCGGCCTACAAAACG GTA CAGTCTGTAGGCCGAATAAGC GGCAGCGCCATCCGG 100 49
A1D48_RS17910 3486747 .. 3486794 -  -5.5  -3.90112   CTGTTGGCAATGAAA GGCGTAAGCGAAGCGCTGATC GTGGCG GAAGAGCATTCCGCTTACGTC AAAATCGACAGCAAA  61 132
A1D48_RS17900 NONE
A1D48_RS17895 3481876 .. 3481894 -  -5.2  -5.08824   TTGCTATTGAAAAAA             CCGCTGTG TCG CAAAACGG             CGGTTTTTTTATTCA  79 71
        bolA 3473816 .. 3473829 -  -9.5  -5.23292   TCAGACAAAACAAAA               CGGCC CGCA GGCCG                TTTTCACATAATTCT 100 86
A1D48_RS17840 3472188 .. 3472209 - -11.6  -5.93809   GCGTGACAAAAAAAA           CCCGTCAC TGAAAG GTGACGGG            TTTTTGTGCAAATTT 100 61
A1D48_RS17835 NONE
A1D48_RS17830 3469801 .. 3469819 -   -11   -4.3623   ACAGGAAAAACGAAA             GGGGAGAT AAA ATCCCCCC             TTTTTTGGCTAACTG  90 58
A1D48_RS17825 3467250 .. 3467279 -  -8.6  -5.72616   AGCTATACAAAAAAA       GGCTGGCAAGTCC GAAAT AG-CCTGCCAGCC       CTGTTTTTATTAGCG 100 58
        hupB 3466776 .. 3466795 -   -10  -5.45652   ATCGCCAATAAAAAA            GGCACATC AGTT GATGCGCC             CTTGTACTTTGTCAC 100 61
        ppiD 3464606 .. 3464621 - -11.8  -4.39571   CTCAGAAATGGAAAA              GGCCGC GAAA GCGGCC               TTTGTGGGATACAAC  95 73
A1D48_RS17810 3464087 .. 3464109 - -10.7  -3.00601   TAAACGACAAGTACA           GAGGTCATA ACTGG TATGACCTC           TACAGTCTGGCAAAT  76 61
A1D48_RS17805 3463261 .. 3463287 -    -5  -3.54741   GATGAGTTCGTCAAA         GCGCTGAATCAC GCG GTGAATCTGGGC         ATGGCGAAAGATATC  55 381
         cof 3460121 .. 3460139 - -10.3   -6.0458   AGAAACCAAAAAAAA             GCCAGAC TGAAT GTCTGGC             TTGCTGGAAGAGATC 100 43
A1D48_RS17780 NONE
A1D48_RS17775 NONE
A1D48_RS17770 3454843 .. 3454859 -  -8.7  -5.30616   GCAGGGAAAGAAAAA              TGCACCA CGA CGGTGCA              TGATGGGCGAGGCTT  95 60
        glnK NONE
        amtB 3452930 .. 3452948 -  -4.4  -5.33848   ATCACAATTAAAAAA             CATGCCGC TAT GCGGCGTT             AATGGCCTGATGACG  84 102
A1D48_RS17750 3451249 .. 3451269 - -16.9  -3.14132   CGCTGGGTGTATTAA            CCCTCTCCG TAA CGGAGAGGG            TTGGCGCAGGATTAA 100 37
         ffs 3450261 .. 3450283 -  -5.5  -3.33696   TCGCGCTTGAATTAA          CGGAGC-GCG AGTT CGCCGATCCG           AAAACCAGCGCGCCC  53 420
A1D48_RS17730 NONE
A1D48_RS17725 3448399 .. 3448422 - -10.3   -5.4505   GTCGGTAATAAAAAA          GTGCGCACC CTCCCT GGTACGCAC           TGCTTTCCCTGAACC 100 50
        acrR 3440774 .. 3440791 -  -4.1  -2.61116   GCGACACAGAAAATG             TCCAGGA GTTT TCTTGGA              ATATTATCAGGGGGA  44 32
        mscK 3437131 .. 3437160 -  -6.3  -4.09739   GGAAGGGTTGCAAAA       GGGCCTTGAGCAA GGGT TAGCACAAGGCCG        TGAGGCCGAAGCGCG  67 182
A1D48_RS17665 NONE
A1D48_RS17655 3434363 .. 3434387 - -16.5  -3.09671   AGGGTAATGCTAACA          CAACCTCGCCG ATA CAGCGAGGTTG          TCTCTCTGGCTAAAA 100 62
A1D48_RS17650 3432363 .. 3432381 -  -9.6  -3.30124   CTTGATGGTTCACAA             TCGCAAGC CGG GCTTACGA             TCAAATGGGGCGGAT  74 26
A1D48_RS17645 3432014 .. 3432027 -  -2.3  -2.64099   GGTTTGCATCAGAAT               GGCAT CTTA AAGCC                TGGCGGCAGTTGCAT  39 5
        recR 3431310 .. 3431326 -  -3.7  -3.67558   GATAGACCTCAACAA              TGCCATT TTT AATGGTA              AAAATACGTTGAGGG  53 101
        htpG 3429144 .. 3429172 -  -5.2  -5.31877   AGGTATTATAAAAAA       TGCCGGAT-GGCG CTGG CGCTTATCCGGCC        TACAAACAGTACTCG  82 270
A1D48_RS17625 3428255 .. 3428286 -  -4.3  -3.30441   CAGTAGGCCGGATAA      GGCGTTCAG-GCCG CCATC CGGCACCGATTGCC      TGATGGCGCTACGCT  52 96
A1D48_RS17620 3427000 .. 3427038 -  -5.2  -2.80816   CGCTCATTGATGACA  GCCGCTTGCTGCACCAG ACATTA CAGGCGCACCA-GCAGC   CCTGCGAATACAAAA  47 153
A1D48_RS17610 3424246 .. 3424265 -  -2.2   -2.8991   ATCGAAGAAGAGAAG            CAAAT-TCC GGT GGATATCTG            TAATCATGCCCTGCT  40 501
A1D48_RS17595 3419657 .. 3419689 - -12.8  -2.63623   CTGCGTAAAATACAT     TGCCGGATAGAGGCG CAAA CGCCT-TATCCGGCC      TACAGCAGACATAAT  81 92
A1D48_RS17570 3413866 .. 3413878 -  -2.6  -4.63218   CGTGCGGGAACAAAA                GCCG ACCGA CAGC                CGCCTTAACCAACGC  65 218
        fetA 3411883 .. 3411901 -    -3  -2.74523   GTATTGGTAATATTA             TGCTCGTT CAT AACGCGCC             TCCTGCATCTCTCCG  41 4
        fetB 3410691 .. 3410710 -  -3.6  -4.57341   AAGCGGTGTTAAAAA            CT-ATCCCG CTA CAGGATCAG            GATACCCGTTATCAG  69 429
A1D48_RS17530 NONE
A1D48_RS17525 3405464 .. 3405487 - -12.4  -3.41701   GCGACTAAAAAAGTA          CGCGCCGTTT TAAA AACCGGCGCG           AAATTATTCACATCA  90 45
A1D48_RS17520 3404141 .. 3404175 -  -2.1  -3.70902   TGGCGTAGAGGGAAA    TGCCGGATA-AGAGGT CTTT ACGCCAACATCCGGCA     CAGGAAAACGCTTTA  49 38
A1D48_RS17515 NONE
        sfbB NONE
A1D48_RS17505 3401295 .. 3401318 -   -11  -5.27923   CAACTGGAGAAAAAA          GCCGCGAATA TCGT TTTTCGCGGC           CCATGGCAAGAGGTT 100 103
        allA 3398519 .. 3398533 -  -7.2  -4.12254   TATGAGCATAAACAA               TGAACA ATA TGTTCA               TCTTATGCAAGAAGG  72 50
        allR 3397635 .. 3397654 - -13.6  -3.67443   AAAATTTTAAAAAAG            TCCCGCTC CAGC GAGCGGGA             TGCGGCTCAGGCTAC 100 32
         gcl NONE
A1D48_RS17475 NONE
        glxR 3393996 .. 3394021 - -11.9  -3.01712   TGTTCCTTGTGAACA         GGTATCGCTGC AGCC GCAGCGATACA          CATAATTAGGACAAT  81 31
A1D48_RS17465 NONE
A1D48_RS17460 NONE
        allB 3389688 .. 3389708 - -16.9  -3.83378   CCTTAAAATAGAGAA            TGCCCGTCG TGA CGACGGGCA            TTAAATCACACCGGA 100 41
A1D48_RS17450 NONE
        glxK 3386984 .. 3386994 -  -2.4   -3.8062   TAACCTCGACAACAA                 CTGG GTG CCGG                 TGAAAAAAGGCGACT  52 227
        fdrA 3382022 .. 3382036 -    -2   -3.6682   CGCCACTGATGTAAA               CATGGG AAC CCCTTA               TTGCAAACGTTCTAA  49 23
A1D48_RS17420 NONE
A1D48_RS17415 NONE
A1D48_RS17410 3379010 .. 3379044 -   -10   -3.8323   AAGCTTAAATAAACA    GCG-TGGGCGGCG-CA TTCTC TGTCGCCGCCCGTCGC    GATCACAGACAGATG  80 28
        cysS 3374499 .. 3374528 - -15.1  -6.04324   CGAAAAAATAAAAAA       CAGGCCGTTCTAT GCAA ATAGAGCGGCCTG        TAAAAGCGCTTACTT 100 35
A1D48_RS17350 NONE
        fimA NONE
        fimI NONE
        fimC NONE
A1D48_RS17330 NONE
        fimH NONE
        sfmF 3364809 .. 3364833 - -10.8  -2.65532   ATTATTGTAAAGGTA         CTCCCG-ACGA ATTA TCGTTCGGGAG          CCACAATAACGGACA  74 41
A1D48_RS17295 3361518 .. 3361533 -    -4  -3.14878   CTTGTGAAGTGAAGA              CTTCGT GTAG ACGAAA               CGCGAGAATTATACG  48 57
A1D48_RS17290 NONE
A1D48_RS17285 3359996 .. 3360023 - -11.4   -4.4648   ATGTTCACTATAAAA        TAAAAGTGGGTG TACA CGCCCACTTTTA         TTACATATTTAAAGT 100 145
A1D48_RS17245 3353243 .. 3353259 -  -9.4  -5.83822   GACAGGCAAAAAAAA              GCCCTG ATTAA CAGGGC              TACGTTATTTATGTT 100 41
A1D48_RS17240 NONE
A1D48_RS17235 3352250 .. 3352279 - -14.3  -3.13867   TCATTCATCAACACA       TTGTCGGATGGCG CAAG CGCCACCCGACGA        ATCGCGGCATAAAGA  95 55
        pheP 3349298 .. 3349329 -   -16  -2.56596   TGCGGCATTAATGGA      TTGCCCGATCGCAT GAAC ATGGGATCGGGCAA       AAAAGTTAATGAGCC 100 31
A1D48_RS17210 3345772 .. 3345788 -  -2.2  -4.25104   GGCGTGTCATCAAAA              TCGGGC GCTAA ACCCAA              CGTTATAACGGGTTT  57 3
A1D48_RS17205 3342421 .. 3342443 -    -7   -3.1706   AATGCAGTGGATCAA           CTCCGCCA GCATACA TAGCGGAG           AGTATTTCCACGGAC  56 452
        ramA 3335429 .. 3335464 -  -2.6  -4.56597   GCGCTGGCGCAAAAA    CTGGTCGGGATC TTTCATCTTATG GATCTCAACCAG     CTTTATACTTTGTTG  65 133
A1D48_RS17130 3329688 .. 3329706 -    -3  -3.13475   GAATTCCATACTCAA             CTCCTGTC ATG GACATGTG             CCCGGTTAAAGCGTG  45 31
A1D48_RS17125 NONE
        entF 3325516 .. 3325542 -   -14  -5.45652   AGTTGCAATAAAAAA         CCCATAATAATT AGT AATTATTATGGG         TTTCAGGATTTAATT 100 65
        fepE 3324163 .. 3324183 - -11.9  -4.05389   CACACAGATGACAAA            GCCGGATAA TCG CTATCCGGC            TTTTCGGGTAAATCA  93 38
        entS 3319948 .. 3319990 - -10.1  -2.79183   TTTAGCCTTATCAGA GTCTTATCCGACTGACCAGA CAGA TTTTGTCAGTCGGATAA-AC GCCCCTTCATCAGCC  71 35
        entC NONE
        entE NONE
A1D48_RS17075 3315000 .. 3315019 -  -3.5  -3.48505   TCTGAAAAATCAATA            CAGGGCA TTACTC TACCCCG             CGAGAAAGCAGCGCC  50 13
        dhbA NONE
        entH NONE
        cstA 3311508 .. 3311532 - -12.9  -2.78798   ACCTGTCATCCAAAT          GCCCTCTCC TTATTCT GGAGAGGGC          TATTGATGTAAAAAG  85 42
A1D48_RS17055 3310977 .. 3310989 -  -3.4  -4.81249   CCGCAAACGGAAAAA                TTCC TGCAC GGAA                CGAAAGTGGCTTATG  70 324
A1D48_RS17045 3308815 .. 3308849 - -10.1  -3.24232   TGCGCCTGAAACAGA     TCAACGGCCTGCA GGAGCTTTT TGCAGACCGTCGA     TTCTCCAGAGCGTGG  74 53
        ahpC 3303762 .. 3303779 - -12.7  -4.05788   GGTGCTGAAATGAAA             TGGGCGC GGGT GCGCCCA              TGACTGAAACAATTT 100 162
        ahpF 3301949 .. 3301969 - -14.1  -5.63517   CGTTGAAATAAAAAA            CCGTCTGTT ATT AACAGACGG            TTTCAGAGTATTGAT 100 165
A1D48_RS17005 NONE
A1D48_RS17000 3298937 .. 3298949 -  -5.5    -3.445   CTATTCACTAAAAAC                GCACG TCT CATGC                TACGGATTCCCCTTT  57 20
A1D48_RS16995 NONE
A1D48_RS16990 3297576 .. 3297608 - -13.4  -2.83903   GTGGCTAAAAACTGA      CACGCCCTGCCAGG TCACG CCTGGCAGGGCTTT      TTACTGCATCATCGT  86 40
A1D48_RS16980 3295616 .. 3295635 - -12.2  -2.87881   TAATGCGTTTACACA            GAGGATGC CTGC GCATCCTC             TTTCCGTTAGCCCTT  80 56
        dpiB NONE
        dpiA 3284583 .. 3284601 -  -2.4  -3.59979   CCCCGGCATCTTAAA            CCA-GGC TTAGCC GCCGTGG             TAAATACGCTGCGGC  49 13
        pagp 3282037 .. 3282053 -  -7.3  -4.02302   TTTACATGAAAAATA              GACACAA ATG CTGTGTC              GGATACCAGTACAAC  72 171
        cspE 3281757 .. 3281773 - -10.8   -6.3578   AGCGCAAAAAAAAAA              CCCGCC GAAAG GGCGGG              TTTTGAAATCTTGCT 100 54
A1D48_RS16885 3280374 .. 3280393 -  -5.6  -4.72272   CTTCTTCACTAAAAA            CAGGCTGCG TAA CGC-GCCGG            ATTAACCTGAGAATA  74 113
        tatE 3280100 .. 3280114 - -11.4  -6.11644   TCAGGCAAAAAAAAA               CCGGCA ACT TGCCGG               TTTTTTTACTCTGCG 100 60
A1D48_RS16820 3267887 .. 3267900 -  -8.1  -3.04461   GACGCAGGCGCAACA               CCAGC AGTG GCTGG                AACAGCATCTGACCC  60 191
A1D48_RS16795 NONE
A1D48_RS16790 3261434 .. 3261455 - -10.1  -3.54653   ATTCCCAGGAGATAA           CCGGACAGC TGGT GCTGCCCGA            TTTGGTATCAGAACG  77 33
A1D48_RS16785 3260419 .. 3260434 - -11.8  -3.85698   CTGTTGGTTTATAAA              CGGGCG AGAC CGCCCG               TCGTGATTTATTTTC  93 51
A1D48_RS16780 NONE
A1D48_RS16775 3257863 .. 3257885 -  -9.9  -3.04263   ACTGCACGCTTAACA          TG-GCGGACG GCAC CGTCCGCTCA           CGATAATGAACCTTA  71 38
A1D48_RS16765 NONE
A1D48_RS16760 NONE
A1D48_RS16755 NONE
A1D48_RS16750 3252388 .. 3252402 - -12.8  -3.62275   ATTGACGAGCCGAAA               GCGCCG TAA CGGCGC               TTTCACTGCCCCTGT  95 41
        ubiF 3237528 .. 3237549 -  -3.7  -3.06686   ATGCTACATAAAGTA           GTACGTTGC CAAT ACAACGTAT            GCACAATTGAAATGG  45 175
        nagE 3227636 .. 3227659 - -10.2  -5.75342   TTGCGGTAAAAAAAA          GCGGCGAAGG TTTT CCTCTGCCGC           TTATGTTTTCTGTGA 100 84
        glnS 3225781 .. 3225797 - -11.5  -5.38951   AATGCAGAGAAAAAA              CGCCGCA GAA CGCGGCG              TTGACAAGGTATTTT 100 68
        chiP 3223740 .. 3223766 -  -8.6  -3.01712   GGTCGTTCCTCAACA         GCGCGGCAGACC GGC AGCCTGCCGCAT         CTGACATCAGAAAAT  66 32
A1D48_RS16595 3223348 .. 3223374 - -13.7  -5.07107   TAAAGCCTGAAAAAA         CCACGGGCGGA AAACA TTCGCCCGTGG         GTGGCAAGGCAGGGT 100 42
        seqA NONE
A1D48_RS16545 3213279 .. 3213294 - -10.4  -5.47159   CGTTAATACAAAAAA              GGAGCC GTAA GGCTCC               TTTTTCTTCCATATC 100 46
A1D48_RS16490 3200004 .. 3200018 - -11.4  -5.60993   TGGCGCATAAAAAAA               CCGCCA GCG TGGCGG               CTGACGGTTTTTCAG 100 52
        phrB 3198311 .. 3198323 -  -6.9  -3.56821   ACCAGACCTCGCAAA                GCGCC TTC GACGC                CAGCGGCGCGGTTAA  60 215
A1D48_RS16470 NONE
        pxpB NONE
A1D48_RS16460 NONE
        pxpA 3193342 .. 3193364 -  -6.2  -4.19371   GAAAGGGGTAATAAA           GAGTCAGGTA GTT TACCCGCCCC           GGAGGTTTGATTAGA  70 260
A1D48_RS16450 NONE
A1D48_RS16445 3192236 .. 3192246 -  -2.6  -4.78661   ATTCAAAAAGTAAAA                 TAAA GGA TTTA                 ATTCTTAGATATGAT  68 297
A1D48_RS16440 3191737 .. 3191747 -  -6.8  -3.34222   ATCAGTACGTCAGAA                 CCTG ATA CAGG                 CTGAACAACGCTGCG  61 1
A1D48_RS16435 3190974 .. 3190988 -  -7.2  -3.68351   GCGGCATGATGTAAA               TATGCT GTC AGCATA               AATCCGGTGCGTTAC  67 18
         glf NONE
A1D48_RS16425 NONE
A1D48_RS16420 NONE
A1D48_RS16415 NONE
A1D48_RS16410 NONE
A1D48_RS16405 NONE
A1D48_RS16400 NONE
A1D48_RS16395 3180980 .. 3180999 -  -5.7  -2.60079   CCAGGGCATAATCGA            CTCAGCCC TTGTC GGGC-GAG            CGCCCAATAATGATT  50 67
A1D48_RS16390 NONE
A1D48_RS16385 3179826 .. 3179840 -  -2.7  -2.77899   TCGCGGCAGGAAGCA               GTGCC GATAT GGCGC               TCATCATGGCAATGC  41 181
        sdhC 3176339 .. 3176352 -  -3.1  -2.78384   GCGTTGCTTACCATA               CG-AGG ACT CCTGCG               AGAAGTGAAAGCACG  43 4
        sdhD NONE
        sdhA NONE
A1D48_RS16345 3173145 .. 3173165 - -14.1  -2.55351   GCCGTGGATACTAAC            CACGCATAC GCT GTATGCGTG            CCGGGGTTCACTTGT  87 351
        sucA NONE
        odhB 3168878 .. 3168891 -  -6.7  -2.81464   CCATCAGGCATTACA               CCATC GCCG GATGG                CGGCGTGAACGCCTT  55 77
        sucC NONE
        sucD 3166698 .. 3166716 - -11.7  -5.33866   TAAAGCCATAAAAAA             GGCCACC GTAAA GGTGGCC             AACCATGTCGAAAAC 100 75
        cydA NONE
A1D48_RS16310 NONE
        cydX NONE
        ybgE 3161994 .. 3162019 -  -9.1  -4.82154   AAGGGAGAGTAAAAA         TATATGGGCTT ATGC AAGCCCCTATA          TTTTTAAGGAGGTTT  90 46
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal 3157051 .. 3157062 -  -2.2  -2.52896   TGATGTCTGAAGTTA                CTGC TCAT GCAA                 TTCTCTTAGTAAACC  39 31
        cpoB 3156221 .. 3156268 - -14.3  -3.15579   TCAACTGCTTAGGAA TCGCACGACGCGACCAGAAAA AAGGCG TTTTCTGGTCGCATGGTACGC ATTACATCGCGTTAA  95 27
A1D48_RS16260 NONE
A1D48_RS16255 3155812 .. 3155824 -  -4.8  -2.76189   CAACTGAGCTAACGA                CCCA AGTGG TGGG                TGATGACGGGATCGA  49 19
A1D48_RS16250 3155591 .. 3155605 -  -2.1  -3.10409   TACCAACTGAGCTAA              CGACCC ATAC GGGT-G               CTGCCTGAAAGATTT  42 159
A1D48_RS16245 3155384 .. 3155398 -  -3.5  -2.76189   CAACTGAGCTAACGA               CCCCT TGGAT AAGGG               TTACTGCTTCAATCA  43 148
A1D48_RS16240 3155188 .. 3155202 -  -9.2  -4.84527   TGCAGATAGCAAAAA               GGCGCC GCC AGCGCC               CTCTTTTACATTGAT  90 134
        nadA NONE
A1D48_RS16225 3152885 .. 3152901 -  -2.1  -3.06501   TACAGCGCCATTTAA              GCCGGGA AAT CCCCGAA              GTCCGTAACGTACAC  42 256
        aroG 3150293 .. 3150309 - -10.8  -5.63517   TTTCCAAATAAAAAA              CCGGCC TTACG GGCCGG              TTTAAGACGTAATGA 100 44
A1D48_RS16205 3149088 .. 3149118 -  -4.7  -2.52834   GAGCGGAGCATTAAC      CCGCG-CATCAGAG ACTC CCCCGATGTCGCAA       TACAATGCTTAAAAA  46 2
A1D48_RS16200 3148254 .. 3148299 - -18.6  -3.29511   CGGATGGCGGTATAA CTGC-CTTATCCGGCCTAC GAGCAATGG GTAGGCCGGATAAGCGCAG CGCCATCAGGCAATA 100 45
A1D48_RS16150 3139055 .. 3139072 -  -9.8   -5.1356   CTTGAGTAACAAAAA             CGCCCG ACTGAG CGGGCG              TTTGGGGAAATCAGC  93 36
        modA NONE
        modB NONE
        modC 3136174 .. 3136188 -  -6.4  -3.95456   AAAGGCAACAGTAAA               GGCAAG CGC CTTACC               CAGTGGATAGAAGCG  65 230
A1D48_RS16125 3134318 .. 3134346 - -17.4  -3.87815   GTTCAGGCTTATAAA        CGGGCCGCCGCA GCAGA TGTGGCGGCCCG        TGGTTTTACTGCAAG 100 94
A1D48_RS16115 NONE
A1D48_RS16110 3130613 .. 3130627 -  -2.1   -3.3382   CGGATGACAGATTAA              CGC-CA CCAG TGCGCG               ATTTGCCAGCCAAGC  45 7
A1D48_RS16105 3129743 .. 3129760 -  -7.1  -3.08176   TAAGAATCAGACATA             TACTTGT CTAT ACAAGTA              AGCACAAGAATAGAA  60 104
        hutU NONE
        hutH 3126377 .. 3126408 -  -8.6  -3.53444   GGATGGTGGCGTAAA      CGTCTTACCCTGCC AACG GGTTGGGTAAGCCG       AATAAGCGCCGCGCC  71 53
A1D48_RS16080 NONE
        bioF NONE
        bioC NONE
        bioD 3120786 .. 3120805 - -12.2  -3.54488   TCTGGCGAAAGAACA            GCAGGATC GTCA GATCCTGC             AAGAAGGCGGTTTTT  88 49
A1D48_RS16060 NONE
        uvrB 3118116 .. 3118138 -  -8.4  -4.64657   TGAAATTCTCAAAAA           CGAGCCATGG TAA CGATGACTCG           CTGGCGATCGACACA  89 44
        slrP 3115342 .. 3115369 - -13.6  -3.40403   CTGCGCTTATCAGAA        GCCTGTTTACACC GAA GG-GTAAACAGGC        TCTCTCCCCCTTCTG 100 56
        moaA 3113000 .. 3113014 -  -2.8  -2.76492   TGACTCATCTGAAAT               CTCCTT ATT AAGGAT               TAACCGCCAATGTAA  41 25
        moaB NONE
        moaC NONE
        moaD NONE
        moaE 3111273 .. 3111292 -    -5  -3.53091   ACTCCTGTGTGGAAA            TGATACCC TAAA GCGTATCA             CATTCTGCTACCAAC  56 33
A1D48_RS16015 3110510 .. 3110528 - -10.3  -5.42862   ATAGTCCTAAAAAAA             TCCTGGC GCAGG GCCAGGA             TTTTAAGAGATAGCT 100 45
A1D48_RS16010 NONE
A1D48_RS16005 NONE
A1D48_RS16000 3108139 .. 3108173 -  -8.6  -3.64703   CTGCCGTCATGGAAA     TTCGCGCTGGCG CAGATGGCGAT CTCCAGCGCGAA     CTGGATGGCGATGGG  68 347
A1D48_RS15980 3104589 .. 3104599 -  -2.4  -3.53091   ATTTTCGTTGGTAAA                 GCGG TGC CGGC                 GCTGATTGTCGCGAC  47 417
A1D48_RS15945 NONE
A1D48_RS15940 NONE
A1D48_RS15935 NONE
A1D48_RS15930 3093810 .. 3093834 - -14.9  -3.77906   AACGGAAACAGAGAA          GCGCCGCCGCA GAA CGCGGCGGCGA          AAGTCATTAACGCAG 100 32
        adhE 3091145 .. 3091167 -  -5.4  -4.07885   GAGCCGCGGGGAAAA           TGACGCCCCG CGA CGGGGATCCA           TGCGTTATTGTTCAG  65 30
        rhlE 3089552 .. 3089596 -   -10  -2.71011   ATGGCGGTGCAAGCA CCTTATCGGGCCTACGTATT TGCAT AGTCCGTAGGCCCGGTAAGC GTCGCACTACCGGGC  71 58
        dinG 3087281 .. 3087294 -  -9.5  -3.24747   TGCTCACAGCATTAA               CGCCG TCGG CGGCG                TGCAGGTTTTGCTTT  72 8
        ybiB 3085966 .. 3086001 -    -6  -4.41844   AAAACCTGCATAAAA    TCGGCGTAGTGTCTGCC GAT GGC-GCCACCACGCTGG    ATGGCCTGGAAGCTA  73 297
        rlmF 3083665 .. 3083678 -  -2.3  -4.11692   TATTCAGTTTGAAAA               CGGGA TGAA TACCG                GCGACTTAGTCACCA  56 522
        ompX 3076489 .. 3076506 -  -9.1  -5.81412   TTCAGGCAAAAAAAA             TCCGCCC CGAA AGGCGGA              TTTTTCATTTTCACC 100 48
A1D48_RS15845 NONE
A1D48_RS15840 3072478 .. 3072501 -  -7.4  -4.15106   GATGAACCGGTAAAA          GCCACCA-CCG AGC CGGACGGTAGC          CGTTACATTGAGGTA  74 249
A1D48_RS15830 3069911 .. 3069943 - -15.7   -3.0263   ATTACCTTGTTAACA      TTCTGTAACCCCGAC GCT ATCGGGGTTACAGAC      AATAACTTACTCGAT  93 32
A1D48_RS15825 3068784 .. 3068803 -  -9.2   -2.9175   TACACTTTAACGAGA            GTCGGGGC AATC GCCCCGAT             TTCTCAATGAGCATT  67 29
A1D48_RS15805 3065498 .. 3065511 -  -8.1  -3.04144   GCGCTACGCTTAACA               GGCCT GCGC AGGCC                TGTTAATCAGAAGGG  62 32
        iaaA NONE
        gsiA 3056820 .. 3056831 -  -7.2  -3.36492   GTCTGAATGTTATAA                GCGC GAGA GCGC                 ATTATCCTGCAGCGG  63 8
        gsiB NONE
        gsiC NONE
        gsiD 3052904 .. 3052915 -  -5.8  -3.54424   CTCGACTTCCTGAAA                GAGG CGCG CCTC                 GATCGTGTAGGCTGC  57 458
        bssR 3051296 .. 3051313 - -12.7  -3.61398   GCGGTCCGGTAATAA             GGGGGAG TCGC CTCCCCC              TTATTCAGACCTGTG  95 30
A1D48_RS15745 3049994 .. 3050006 -  -6.9  -2.71791   ACGTGGGTCTGAAAT                GGACG CCG CGCCC                GAATCTGGAACGCTG  52 98
        dacC 3047967 .. 3048005 - -17.4  -2.50816   CTCTGATGTATTAAC   TGCCCGTTGCCGGATGCG ACG CGCACCCGGCAACGGAGT   TATTTTACGAGAACC 100 30
A1D48_RS15720 3044482 .. 3044492 -  -8.2  -4.10429   AACGATGCGTTAAAA                 GCCG TTG CGGC                 AATGTATTATCATCG  77 515
A1D48_RS15705 3041817 .. 3041865 -  -5.2  -3.14132   TGTGCTGCGCATGAA CCGGGCGCTGCTGTTCG-GCGCC ATGATG GGCGCGCGTAC--CTGCGCCCCG GCGATGGAAATCATT  50 277
A1D48_RS15685 3039289 .. 3039301 -  -5.5  -3.56704   GGGTTATCAAAGGAA                CAGGC GTA ACCTG                CTTTTCATCTGCCGT  57 391
A1D48_RS15675 NONE
        nfsA 3038176 .. 3038196 -  -7.5  -4.19276   TGAAAACCCTGAAAA            GCCCGCGTA TCA TACACTGGC            CCGCAGGTTTTAGCG  74 35
        rimK NONE
A1D48_RS15660 3036625 .. 3036665 -  -3.4  -5.67967   AGCAGCATAAAAAAA CG-TAAACAG-CAGCCGC GCTGGCA GCGACTGCCTGATTATCG GGAGGGATCAGTGAA  95 33
        potF NONE
        potG NONE
        potH NONE
        potI 3032135 .. 3032153 - -11.7  -3.08032   CTTCCCTGAAAATGA             TGCCGCG ACCCG CGCGGCA             ACGCATTGCCATAGT  81 58
A1D48_RS15635 NONE
        rlmC 3030375 .. 3030417 - -11.7  -3.10901   AAATAGGGTAATATA TAAATACAACCAATTGAAT TAAAT AATCAATTGATTGTATTTA TTATTTTTATGAAAT  81 74
A1D48_RS15625 NONE
A1D48_RS15620 NONE
A1D48_RS15615 3026913 .. 3026930 -  -9.1  -3.58343   GTCATCAGTCTCAAA             CGCCTGC ATCA ACAGGCG              ATTCGGACTAATACT  75 88
A1D48_RS15575 3021737 .. 3021752 -  -3.2  -2.65264   CCACCAGCCACAGTA              GCGC TCTCATCG GCGC               GTTTTCACCGCCGTT  42 16
A1D48_RS15570 3020870 .. 3020901 -  -6.4  -2.56596   CGCTGGACGAAGGCA      TTGAGCGCACCGCC GCCT GGCTGCGCGATCAC       GGAAATTTACCGCGT  53 40
A1D48_RS15525 3009844 .. 3009863 -  -4.2  -5.14965   ATCGCCAGTAAAAAA            CGG-GCCGA GTA TCGCCGCCG            CTATGCGTTACTCGA  85 77
        macA NONE
        macB 3005668 .. 3005688 - -12.6  -4.21462   ATCCAGGAGGCAAAA            TGCCAGCC CGATC GGCTGGCA            TTTTTATTTAACGCC 100 98
        clpS NONE
        clpA 3002418 .. 3002435 -  -9.8  -5.60993   GCTGGCATAAAAAAA             CCGGGC GCTAAG GCCCGG              TTTGTACGGCAGTGA 100 49
A1D48_RS15455 2998663 .. 2998679 -  -7.9  -4.36914   GGCGGCTGGATAAAA              GGTCGGT TTA ACCGGCC              TTTTTTGCGTCCATT  79 63
         lrp 2991649 .. 2991678 - -16.5  -2.75577   CGATGCTAAAACGGA       CAACAGCACCGGG TTGC CCCGGCACTGTTG        CTGTATGGATTAACA 100 82
        ftsK 2987600 .. 2987614 -  -3.4  -4.19704   CAAGTTTACTCAAAA               GGCGGC GGA GCCAGC               ACTTCACGATTACCA  60 1
        lolA 2986808 .. 2986829 -  -2.3  -3.55254   TATTATCAGAAAAAT           CGAGCGA-CA GAT TGCTCACTCA           TCGCCTCTACTTACG  47 32
A1D48_RS15400 2985298 .. 2985314 -  -9.5  -3.18582   GATTGTATTGATGAA              CGTAAAC CGC GTTTACG              TAATAGCGACGTTTT  72 194
        serS 2983893 .. 2983906 -  -9.5  -5.61596   ACTGGCATAAAAAAA               GCGCC CGAA GGCGC                TTTTTAGAAGAGGAG 100 51
        dmsA NONE
        dmsB NONE
A1D48_RS15380 2979710 .. 2979748 - -23.3  -3.53811   TTGATGGTGGCTAAA   GGCGCATTCGGCCTGCA CGTTC TGCAGGCCGAATGCGCG   TCAACGCGTTAGCTG 100 34
A1D48_RS15375 2978219 .. 2978244 - -12.7  -3.95749   AAACATAAACAAAGA         GTATGCAAGAC TCAC GTCCTGCATAC          GATTCAGAGAACAGT 100 40
A1D48_RS15370 2976355 .. 2976376 - -11.6  -3.53444   TTACCCGCTTTTAAA           CGGCTACC CATGGC GGTAGCCG            TTTTGCTGTCTGGAT  85 269
A1D48_RS15355 2973965 .. 2973984 -  -4.9  -5.28826   AAAGCGTACAAAAAA            GGCTCCA TATCAG TGGGGCC             TTTTTAATTTTTATA  82 36
A1D48_RS15335 2967594 .. 2967613 -    -5  -3.70863   CAGACATCAGGCAAA            CGTTATTC ATGT GAATATCG             GTTTTATCATTCAGT  57 142
        serC 2966418 .. 2966438 - -10.4  -5.48623   AAACAGAAATAAAAA            CCCCACAG ACTGG CCGTGGGG            ATGAAAAAAGAAACG 100 43
        aroA 2964992 .. 2965007 -  -3.3  -5.33785   AACTATTATAAAAAA              CACAT AAATCA ATGTG               TTAAATCATCAACAA  81 120
A1D48_RS15320 2964159 .. 2964183 -  -9.2  -2.90571   AATTGCGCAATTATA          GCGGGCTGGC GAGAA ACCAGCCCGA          AAGATGACAATGATT  67 40
A1D48_RS15310 2963295 .. 2963319 -  -7.2  -3.06696   GGGTTGTTTAACATA         CCCGCTGTCAA TCCT TTG-CAACGGG          GGTACTACAAATTCG  60 48
        rpsA 2961452 .. 2961469 - -14.1  -3.20382   CGTGAGATTGATTAA             GGGCGGC CGTA GCCGCCC              TTAGTGCTTGATTAC  95 111
        ihfB 2961070 .. 2961084 -  -7.1  -5.42514   GTATAAATGAAAAAA               GCACC CTGAC GGTGC               TTTTTTCGGGTTCAA  95 56
A1D48_RS15295 NONE
        msbA NONE
        lpxK 2955807 .. 2955846 -  -3.1  -2.78414   GGAAAGAGAAAGGTA CGGCAATGAC--ATTCATG ACTC CATAAATTCATCACTGCCG  CTGCATTGGGGGACG  43 41
A1D48_RS15280 NONE
A1D48_RS15275 NONE
        kdsB 2953499 .. 2953512 -  -5.3  -4.45077   GAAAAATGAGGAAAA               TCGTA ACGG TACGA                GAAAGCCGCCACTGA  71 122
A1D48_RS15265 2952253 .. 2952285 -  -5.4  -3.98378   GATACGGAAGAAGAA      GCCGCCGCCGTTAA GCAGG CCATCGGCGACGCC      CCTTTCCTGTTGGTA  63 245
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 2944217 .. 2944232 - -11.8  -5.42975   TCAGATAAAGAAAAA              GGCGGC CTTC GCCGCC               CCAGGCTAATGATAA 100 137
        ldtD 2942082 .. 2942106 -  -4.3  -3.35679   CTCCCCCAGCCACAA         CGGGG-GTCT ACAGCG AAACGCCCCG          TTGAAGCCAAACATT  52 71
A1D48_RS15225 NONE
A1D48_RS15220 2940639 .. 2940655 - -12.3  -5.28176   GTGACCGATAAAAAA              GCCTGCA CAT TGCAGGC              TTTTTCATTCTGCTT 100 39
        dpaL 2933739 .. 2933790 -  -3.2  -3.03798   AGTCTCAGAAATAAT CTTTCCAGTTCAGCGTAATC CTGAATTTTGCC AACAACACTAAACTGGAAAG TCAGCGGGTAGGAGC  45 175
A1D48_RS15185 2931937 .. 2931956 -  -3.4  -4.11216   CCTTGATCTGCAAAA            GGCGGTCG AGCT CTATCGCC             ATTTCGCCTCTCGCG  58 327
A1D48_RS15130 NONE
A1D48_RS15125 2924630 .. 2924654 -  -3.5  -3.61103   TAATTCCACCTGAAA         GCCGTTGGTG TTCGAG CACCG-CGGC          TTTCGCCTTTTTGGT  51 52
A1D48_RS15120 NONE
A1D48_RS15115 NONE
A1D48_RS15110 NONE
A1D48_RS15105 NONE
A1D48_RS15100 NONE
A1D48_RS15095 NONE
A1D48_RS15090 2920683 .. 2920706 - -18.2  -3.61398   GCCCTGCTTCAACAA          CAAGCCCCGC ATAT GCGGGGCTTG           TTGGGTTGACCCGCG 100 64
A1D48_RS15085 NONE
A1D48_RS15080 2919511 .. 2919524 -  -9.5  -5.89947   GAAAGCGAAAAAAAA               CCCGC CGAA GCGGG                TTATATAATTCAGTA 100 73
A1D48_RS15075 2919054 .. 2919075 -  -2.3  -2.88023   GCAGCAGCATCAAAG           GGATA-CGCA AAT TGCGGTATTC           TGAAAAATGCGCGCC  41 57
A1D48_RS15070 NONE
A1D48_RS15065 NONE
A1D48_RS15060 NONE
A1D48_RS15055 NONE
A1D48_RS15050 NONE
A1D48_RS15045 2916212 .. 2916227 -  -8.2  -5.19275   ATCCATAAAAGAAAA              CCCCGC CGAG GCGAGG               TTCTTAATTCTTGTA  91 120
A1D48_RS15040 NONE
A1D48_RS15035 2914844 .. 2914881 - -12.9  -3.89881   ATCAAGGTGCAGAAA   CAGAAAACCCCGACTGTT TGC AGCAATCGGGGTTTTC-G   CTTTTATATCCTTCG 100 213
A1D48_RS15030 2914144 .. 2914162 - -10.2  -4.99638   ATACCGATACAAAAA             CGCCCCGC ATC GCGAGGCA             TTTTCCTGAAAGTCA  93 67
A1D48_RS15020 2913215 .. 2913232 - -11.3  -3.66018   GGAGGATGTCAACAA             GCCCATC CGTA GATGGGC              TTTGTAATGGCTACT  87 36
A1D48_RS15010 NONE
A1D48_RS15005 NONE
A1D48_RS15000 NONE
A1D48_RS14995 2909377 .. 2909391 -  -2.8  -3.20573   TTAGGCACAGGAACA               CCTTCC ATG AAAAGG               AATAAAGAAATTTAA  45 47
A1D48_RS14990 NONE
A1D48_RS14985 NONE
A1D48_RS14980 NONE
A1D48_RS14975 NONE
A1D48_RS14970 NONE
A1D48_RS14965 2905623 .. 2905636 -  -9.5  -5.42514   CCAGAAATGAAAAAA               CCCGC ATGC GCGGG                CCATTAACTGACGTG 100 45
A1D48_RS14960 2903666 .. 2903680 -  -5.6  -2.70932   CTCCTTCGGTAATTA               GCTGCC TGC GCCAGC               GCCGTAGTTGACGCC  50 8
A1D48_RS14955 NONE
A1D48_RS14950 NONE
A1D48_RS14945 NONE
A1D48_RS14940 NONE
A1D48_RS14935 NONE
A1D48_RS14930 2899558 .. 2899571 -  -9.5  -5.95539   CCTGAAATAAAAAAA               CCCGC CGGA GCGGG                TGGTATGGTTTAGGT 100 45
A1D48_RS14925 NONE
A1D48_RS14920 NONE
A1D48_RS14915 2898130 .. 2898143 -  -3.1  -3.81414   ACTCGTAATTAAGAA               GCTTGC GTC GCA-GC               TGTAAGCGCCGCCTC  53 5
A1D48_RS14910 2897415 .. 2897429 - -12.8  -3.52177   CTCTAAAAAATTTAA               CCCCGC TGG GCGGGG               TTTTTATAAAGTCAT  93 52
A1D48_RS14905 2894090 .. 2894104 -  -4.3  -3.61468   GGCTAATTAAATTAA               TGATG CAGTC CATCA               CACGCCTAACAAACG  55 23
A1D48_RS14900 2893685 .. 2893710 -  -7.7  -3.31726   CTCGCTGATACAATA         TCCAGAACTAA AGCT TTAGCTCTGAA          ATTGTCTGGTATTGG  65 15
A1D48_RS14895 2892752 .. 2892763 -  -4.4  -3.09983   AAAAGGGGGAATACA                GCAT TAGA ATGC                 CTCCTCAAGCTCCAG  49 17
A1D48_RS14890 NONE
A1D48_RS14885 NONE
A1D48_RS14880 NONE
A1D48_RS14875 2888086 .. 2888099 -  -3.1  -3.07013   TATTTCCTCAATACA               TATCC GGAA GGACA                AGAATTGGCATATTG  45 4
A1D48_RS14870 2886764 .. 2886821 -  -7.1  -2.68015   CTTAACCAGTAGAAT CCGCCGCGACTGGCAACCATTCAATACT CGC ACTATCGAACGATCGCCAGTCA-GCCGC AATCATGCTCCTGCA  57 141
        pepN 2883429 .. 2883457 -  -9.6  -5.40072   CGTCCGGCAAAAAAA       TACCCGGC-AGCG CTAA CGCTTACCGGGCA        TGTCTTACCTCTTTA 100 53
        pyrD 2882219 .. 2882248 -  -5.7  -4.84918   TGGAGAAATATAAAA       CAACCAGCGCC GGAAATAA AGCCCTGGTTG        TCTGATAAAGGCTAA  76 44
        zapC 2881308 .. 2881323 -  -6.8  -4.05033   GTTACGCCAGATAAA              CACCCG GACG CGAGTG               TAACCATCGACTGGC  68 261
       rlmKL NONE
A1D48_RS14835 NONE
        pqiA NONE
        pqiB NONE
        pqiC 2872804 .. 2872830 - -12.3  -6.20267   TCAAAAATAAAAAAA         CCGCCTCAGGC GCACG ACCTGAAGCGG         TTAAATTTACATTAC 100 48
A1D48_RS14815 2872390 .. 2872406 - -13.7  -3.74347   CCCATAAAGGCGAAA              CCTCCGC ACT GCGGAGG              TTTCTTTTTCTAAAG 100 49
        matP 2869293 .. 2869307 - -12.8  -5.24129   CCGTCTGATAAAAAA               CCCCGC GTC GCGGGG               TTTTTTGCTCTGGTC 100 63
A1D48_RS14785 2866364 .. 2866384 -  -7.5  -3.37959   CAACCTGAAGACGAA            CAGCGCGTA CAC CAGGCGCTG            GAGGGTTTAAAGCAG  61 174
        helD 2861715 .. 2861725 -  -8.2   -3.9122   GAGCGCCTGAAATAA                 CCGC TAC GCGG                 GCGGGATGCTGTACC  72 50
A1D48_RS14755 2859880 .. 2859901 - -10.1   -4.1899   TGATTGTATGTAAAA           GGCCGGAGA GCGA TATCCGGCC            ACTTAAACTTTTATT  85 36
A1D48_RS14740 2857488 .. 2857500 -  -3.4  -3.04144   TCCTGATGTCGAATA                TGCA TCTCC TGCA                CCGTGCCGTCCTCTG  45 43
A1D48_RS14735 NONE
A1D48_RS14730 2856291 .. 2856322 -  -5.8  -5.06414   TTCGGCGAAGAAAAA      GGCAACAGCCGCTA TCTA TATCGTCTGTTCCC       GAAAGGCCCGGCAAA  84 86
A1D48_RS14715 2854796 .. 2854817 - -12.3  -5.04249   CGCCCAAAAAACAAA           GGGGCTACC TTTC GGTAACCCC            TTGTTTAATCTGGCG 100 36
A1D48_RS14695 2851785 .. 2851813 - -15.3  -2.71731   TTTACGTCTTAACTA        CGCCAGCGCCG TCACTAT CGGCGCTGACG        CAGACAATACTGCTT  83 107
A1D48_RS14680 2848964 .. 2848974 -  -2.4  -3.93038   CATTTGAACAGCAAA                 CAGC TAA GCAG                 CAGTATAAGATGGAG  54 440
        hiuH 2844640 .. 2844652 -  -4.8  -3.34233   CCACAAGCGGGATAA                CCAC CGCTT GTGG                GAGAAGAGTCGATAC  54 317
A1D48_RS14625 NONE
        hpaE 2838839 .. 2838856 -  -2.7  -3.83026   CTTGCCCATATCAAA             CT-CCCCA TTT TGGGATAG             GATGGTCGCCCATTG  52 3
        hpaD NONE
A1D48_RS14610 NONE
        hpaH NONE
        hpaI NONE
        hpaX NONE
        hpaA NONE
A1D48_RS14580 2832490 .. 2832512 - -14.2  -3.68359   TCGCCAAAAGCATAA           CAGGCTGACA TCA TGTCAGCCCG           TGGGTTTACCCCTGC 100 49
A1D48_RS14550 NONE
A1D48_RS14545 NONE
A1D48_RS14540 NONE
A1D48_RS14535 2826207 .. 2826240 -  -4.3  -3.83026   TTTTCTTACAGTAAA     CGCGTTAGCGCCGGG AAAC CCCGGCGCATATTCA      GAACGTTTTTGCCCA  58 23
A1D48_RS14530 2824833 .. 2824862 - -15.7  -3.34591   TAAAAACGTATAACA       CAAACGCCCCCGC CTGC GCGGGGGCATATG        GCTATTTTGCGGCAG 100 27
A1D48_RS14515 2823357 .. 2823374 - -14.1  -6.02919   TTATAAACAAAAAAA             CCGCCGG AAAT CCGGCGG              CGGTGGCGCATGACG 100 85
        rutR 2822163 .. 2822185 -  -9.8  -3.59979   TTCGCTGAGCGTAAA           CACTGCCGCC GCT GGCGGTAATG           CCAGCCTGATGACAA  77 499
        putP 2816249 .. 2816274 - -15.5  -3.55447   GGACTTATCAGAGAA         CCAGGCGGGCGT ATA ACGCC-GCCTGG         TAAAATATGTCCGAT 100 67
        phoH 2814596 .. 2814619 - -14.6  -3.58905   ACCGGGGATAGACAA          CAAAGCCCGG TCTC CCGGGCTCTG           AAAGTCAATGCTATA 100 41
A1D48_RS14465 2813738 .. 2813768 -  -2.1  -5.35721   ATACAATAATAAAAA      CATTAATAAACAGC CAAT ACT-CTTATTAATG       AAACATAAATATACG  77 53
A1D48_RS14445 NONE
A1D48_RS14440 2809540 .. 2809554 - -11.4  -5.24129   TCCGGGCATAAAAAA               GCTCCG ATA CGGAGC               TAATATGAATTATTT 100 35
A1D48_RS14430 NONE
A1D48_RS14425 NONE
A1D48_RS14420 NONE
A1D48_RS14415 NONE
A1D48_RS14405 2802407 .. 2802421 -  -4.2  -3.23733   TTCATTGTAGAAAAT               CAGTGC GAA ACACCG               CGAATTTTCGCCACA  48 10
A1D48_RS14400 2802119 .. 2802138 - -12.8  -4.34402   TTCTCCACAGCAAAA            CGCCCGGC ATTA ACCGGGCG             TTTTGTCATCGGGCT 100 31
        yedQ 2799905 .. 2799917 -  -4.7  -3.14211   ACCCGTCTGCATGAA                GCGTC GGT GTCGC                TGATCTGGCGCGATA  47 375
        dsrB 2798509 .. 2798520 -  -4.4  -4.28115   ACGCATAATAAACAA                GTGA TCTA TCAC                 GTAGTACGGCTGACA  66 118
        fliE 2786426 .. 2786456 -  -2.5  -4.61482   CCTCGCAAAAAACAA       GCCCACATAATCA CGCAC TGGTTGCATGGGC       GTCGCGTCCCCCGCC  65 95
A1D48_RS14285 2783275 .. 2783287 -  -4.7  -4.07568   CCTGCTTCGTGAAAA                CGGCG TGC CGTCG                GTGTTTTATCCCGAT  62 458
A1D48_RS14260 NONE
A1D48_RS14255 2778101 .. 2778116 - -10.4  -5.26875   TCCGGAATTAAAAAA              GGCAGC TTTC GCTGCC               TTGATTGTGTACCAC 100 64
A1D48_RS14250 2776840 .. 2776863 - -10.2  -4.42974   GCCAGATAGAATAAA          CGGGATGCGC AAAA GCCCACCCCG           AACAAAACTATGTCA  87 33
A1D48_RS14245 NONE
        fliZ NONE
        tcyJ 2774311 .. 2774328 -  -5.5  -5.67283   AACGGAAATAAAAAA             GGCGC-CG ATT CACGCGCC             TCCGTTTGCTGACAT 100 95
        dcyD NONE
        tcyL NONE
        yecC 2771619 .. 2771630 -    -3  -3.39327   CTTTGATATTGATAA                TCAT TATT ATGA                 ATGACTTAAATTAAC  46 215
        sdiA 2770807 .. 2770833 - -12.2   -5.1861   GCCAGTAGTAAAAAA         CCGGCTGTTAGC ATC GCTTTCAGCCGG         TTTCGCGTCTGGCGC 100 58
        uvrY NONE
        uvrC NONE
        pgsA 2767018 .. 2767030 -  -4.1   -3.5394   AAATTTGCGGCGAAA                CGATC ACT GATCA                AGCAAATCTCCGCGT  52 16
A1D48_RS14185 NONE
A1D48_RS14180 NONE
A1D48_RS14175 2766512 .. 2766525 -  -8.1  -5.66684   GAAGGCACAAAAAAA               CCACC CGTA GGTGG                TTTCACGACACTGCT 100 70
A1D48_RS14170 2765893 .. 2765904 -    -3  -2.97439   AACGTGACTAAAGCA                TGAT GCGG ATCA                 CATTACCTTATGATG  42 109
A1D48_RS14165 2764154 .. 2764173 -  -3.5  -3.95324   TACCGCCAACAATAA            CTCTCAC TTCAAT GTGTGAG             GCACATAATCACATC  55 187
A1D48_RS14160 2763756 .. 2763775 -  -6.4  -4.52589   TCGCCCCACACAAAA            GCGAGAGA TGGG TTTCTCGC             TATATTATACTCATG  76 46
A1D48_RS14155 2762829 .. 2762865 - -18.1  -3.66874   CTAATGCCAGGCAAA    GATTACCGGGCCCGGAC ACC GTCCAGGCTCGATAATC    ATCACGCTATGGCCG 100 52
A1D48_RS14145 2760906 .. 2760928 -  -2.8  -3.59867   CAAAAAATTAATGAA          CTGGCTCAT GCCGCA ATGA-CCAG           CCAGGATTATCCGAC  49 237
A1D48_RS14130 2758734 .. 2758753 -  -9.2  -3.23692   GAGGATTATCAGCAA            CGCGCCAG CACG CTGTCGCG             TCTGGCAGATGAAGC  65 400
A1D48_RS14120 2756917 .. 2756948 - -12.3   -3.5511   CGCCATTTAGAAAGA      CCATCGCCAGCCG GGGTAG CGGTTGGCGATGA       CGTGAAGCTATACTA  93 415
        otsB NONE
        otsA 2754242 .. 2754259 -    -4  -3.55761   CAGCTACTGGCTAAA             GCGGTC TCTATC GCCCGC              CCTGTTCAGGCGAAA  51 388
        flhD NONE
        flhC 2752408 .. 2752431 - -15.4  -5.86332   GCAAGGCAAAAAAAA          GCAGCGGTAA TGGC TTACCGCTGC           TGGAGTGTTTGTCCA 100 52
        motA NONE
A1D48_RS14075 NONE
        cheA 2748503 .. 2748518 -  -3.2  -2.75064   CTTCTCACTCAATCA              GGCG GCTGTGAT CGCC               ATACGTTGTTCGCGG  43 7
        cheW 2747942 .. 2747970 - -19.7  -3.07233   GCATAACGGTGAATA        TTGCCGAATGGCG CGA CGCCATCCGGCAA        CGTTATTACGCGACG 100 31
         tar 2745956 .. 2745978 -  -6.9  -2.76483   CATTCAAAGTACAAC          GGGCGC-GCC CTGC GGCAGCGCCA           TGCTTCCCGTATTAC  55 125
        cheR NONE
A1D48_RS14050 NONE
        cheY NONE
        cheZ 2742866 .. 2742897 - -17.5  -3.10493   GCGTTAATAGAGATA      GCCGGATACGATA AGAAAG TATCGTATCCGGC       CGGGTTGACGGATTC 100 78
        flhB NONE
        flhA NONE
        flhe 2739109 .. 2739127 -  -4.5  -3.56042   TTATTCAAAAAGAGA             GTCAGGT CTGCT ACCTGGC             AAAGAAAGGGGCGGT  54 40
A1D48_RS14020 2737610 .. 2737635 - -10.3  -4.09685   CTTGATTCTGGAAAA         CGGCGGAAGCG ACGG CGTTACCGCCG          CGCCCATCATGCGAA  86 156
A1D48_RS14005 NONE
A1D48_RS14000 2732275 .. 2732299 -   -10  -5.71983   TGAAGGAGAAAAAAA          GGCCCCTG TTGAATTGG CAGGGGCC          TGGTACGAGCAAGCA 100 73
        aspS 2726376 .. 2726389 -  -3.7  -2.80816   CGCGCATTGATGAGA               CTCGC CCCT GCGGG                CCGCCGCGATATCAC  45 69
        nudB 2725868 .. 2725888 -  -3.2  -5.40474   ATTTCCTCAAAAAAA           GCG-CGCCT TTTC AGGCGACGT            TAATGACAAACTCTT  81 15
A1D48_RS13955 NONE
        ruvC 2724520 .. 2724542 -  -7.7  -3.75153   CCTGTGGAATTGAAA           CCCCTCAAC GCGAG GCTGAGGGA           GAATGATTTAGCGCA  71 33
A1D48_RS13940 2722741 .. 2722756 -  -7.6  -4.47611   TATCATAAAAAAAGA              CTGGAT GTTT ATCCAG               ATGAAAAACACGTAT  80 316
        ruvA NONE
        ruvB 2721023 .. 2721041 -  -3.8  -3.21934   CCGGGCCTACAAAAT             CGCCCA GGTCTGA TGAGCG             CAGCGACTTCAGGCG  48 41
        znuA NONE
        mepM 2717044 .. 2717066 - -13.4   -5.8901   ACACAAAACAAAAAA           GCCGGCACAC ATC GCGTACCGGC           TCTGTCAGCGCATTT 100 42
        msbB 2715972 .. 2715989 - -11.3  -3.96148   GTTTGTCAGCATAAA             GCCTCTC TTAC GAGAGGC              TTTATTTATTTGATG  91 31
         zwf 2711565 .. 2711590 -  -5.4  -5.80364   AGTGTAATAAAAAAA         GCCTCGCA-GG TGAAT CCACACGAGGC         TTAAAAGTGCAAAAA 100 105
         edd NONE
A1D48_RS13870 2708841 .. 2708873 - -11.4  -3.08046   GCGTGACGGTAAAAG     GCTAATG-CGCCATC GCCT GATGGCGACGTTAGC      GCATTTTTATCAGAC  79 97
        yebG 2707224 .. 2707234 -  -4.6  -4.41206   AAGCATGGTACAAAA                 CGCC GGG AGCG                 CAAGTGTGGGTTCAG  66 37
A1D48_RS13855 2706810 .. 2706822 -  -5.5  -4.17048   GTTCCGGCAAAAGAA                GCGCA AAT TACGC                TGCTAGCGGGGCTTA  67 28
A1D48_RS13850 2706032 .. 2706046 -  -5.6  -3.39908   GGGTGGCAAAAGACA               CGCATG ATG CAAGCG               AAACATGTTACTTAA  56 51
        ptrB 2703773 .. 2703799 -  -8.7  -3.89291   GGAACACCACAATAA        CCCGCGAC-GCT CACA AGCCGTTGCGGG         CGCGCGTCTATGCGC  76 33
        yobA NONE
        copD NONE
A1D48_RS13815 2700252 .. 2700279 -  -8.5  -5.76633   TCAGAGATAAAAAAA        CCGTAAGCCTT TTCGTG AAGGTTTACGG         TTTTTTATTAAAAAT 100 44
A1D48_RS13800 2699340 .. 2699356 -  -2.2  -3.63054   TAAATTTACACATAA              TGTCTG TCTGG CGGACA              TCCTCTTTCCCTGGT  49 97
A1D48_RS13795 2696796 .. 2696808 -  -3.4  -3.27923   CCTTAACATCAGGAA                GAAG CAGGT CTTC                ATAGCCCACTGTTGC  48 106
A1D48_RS13775 2695277 .. 2695297 -  -2.6  -2.72511   GCTACTCGCTTAAAG            CAGACT GTCAGTTGG AGTCTG            AGCTGGTACAATTAA  41 12
A1D48_RS13770 2694314 .. 2694335 -  -7.3  -3.73072   AATGGGGGCAGGAAA           GCCTGTACT GGTC AGTACACGC            GGCGGGATGACTGAG  65 426
A1D48_RS13750 2692387 .. 2692404 -  -3.4  -3.45054   GGTCAGAATTTACAA             GATCAC TTTTTC GCGATC              ATCGTCATTACCTTG  50 10
A1D48_RS13745 2692088 .. 2692104 -  -6.5  -3.10715   TTTACCATTATCGAA              GCCCCTC GTC GAAGAGC              TTCTGTAATGCTTAA  56 71
A1D48_RS13740 2691498 .. 2691509 -  -4.4  -3.19192   GGTTATTTAATTGAA                GTTC TGAA GAAC                 ATTCCTTATACCCAT  50 5
A1D48_RS13735 2690260 .. 2690270 -  -4.6  -3.33744   CGCCCTCGGAAAAAC                 GCCC ATT GAGC                 CATTGACGGCGTGTG  51 515
       sopE2 2687634 .. 2687665 -  -6.6  -4.75288   TTATATTAAAATAAA      GATGACGACGTTTT GTTA AAAGCGTCGCCATA       AAAATGAATATATAC  80 98
A1D48_RS13715 NONE
A1D48_RS13710 NONE
        pphA 2686106 .. 2686121 -    -6  -4.44608   CTGACTCAAAAAGAA              CCCGTC GCCA GGCGGG               TTATTTATTCTTCCT  76 319
A1D48_RS13675 2679666 .. 2679685 - -12.2  -3.15996   CAGCAGGCATGAACA            GGCGTCAT TATA ATGACGCC             ATCAGTAATTGCTAC  83 53
A1D48_RS13665 2676831 .. 2676852 - -13.1  -6.06723   CTTGTTAAAAAAAAA           CAGGCACAA TTTT TTGTGCCTG            TTTAGCGTTACTTAT 100 33
        htpX 2675743 .. 2675760 - -12.7  -5.42259   TCAGGCGTAAAAAAA             GCGCGTC ATTC GACGCGC              TTTTCATACTTGCCA 100 50
        kdgR 2673344 .. 2673366 -  -9.9    -5.626   GATGTTATAAAAAAA           GCAGCTACA TTTTT CGTAGCTGC           TTTTTTTTAACGTCA 100 56
        mgrB NONE
A1D48_RS13635 2671992 .. 2672008 -  -2.9  -5.26907   TAATAGAAAAGAAAA              GCGATTT TCG ACACCGC              TTTTTGTGATGTTCT  76 304
A1D48_RS13630 NONE
        cspE 2671206 .. 2671224 - -12.4  -4.89009   ATATTGAATTAAAAA             GCCCCGCT TTT AGCGAGGC             TTTATATCTGAGGCT 100 74
        ftsI 2669268 .. 2669295 -    -7  -3.53224   GACTGGGGCGCTAAA        GGGCGCAAGT GTAACGCG AATTGCGCCC         CGGGAAAATCCTTTA  62 38
        rlmA 2668400 .. 2668423 - -10.4   -2.5655   CGTACTGATAGGAAT          TGGCGTCCAGA TCC TCTGGACGC-A          TTTTCACGGTTAACG  70 35
        yoaE 2662124 .. 2662176 - -12.5  -3.09635   ATGCCCATTAGCGAA TTTCCACAGTGGCTGGCGGGCAGCG CGC CGCCGCCCGCCCGGCATAACGGACA GATTATGTCCGCGAT  81 75
A1D48_RS13550 2656438 .. 2656448 -  -2.4  -4.56597   GCGGTGCTGGAAAAA                 CAGG GCT CCAG                 TAAGTCACGTATTCT  65 209
A1D48_RS13540 NONE
        tsaB NONE
A1D48_RS13530 2652788 .. 2652812 - -14.4  -2.56596   GTCTCTATGAATGCA          GAAACAGCGG ACCAG CCGCTGTTTC          TTTTATTGATAAAAC  87 47
        fadD 2650904 .. 2650920 - -11.5  -5.75342   TCGCGCCAAAAAAAA              CGCCGGC TTA ACCGGCG              TCTCTCGTTAGCTGA 100 49
A1D48_RS13515 2649656 .. 2649671 -    -9  -5.14563   TCCTGGATTAAAAAA              GGCAGA AGAA TCTGCC               TTTTTTATTTTTTTA  93 98
A1D48_RS13495 2647370 .. 2647380 -  -8.2  -2.55544   TCATGATGGAATTCA                 GGCG CGG CGCC                 GAATACCGTTTAACG  59 35
A1D48_RS13490 NONE
A1D48_RS13485 2646122 .. 2646137 -  -2.5  -3.98291   AAGAATTGTAAACAA              TCAGC CGTTTT GCCGA               AGACTTATTCTGCCC  54 30
A1D48_RS13480 2645604 .. 2645632 - -13.1  -5.52909   GAAGATGTAAAAAAA        CCGCCTGGCACAG GAG CTGCATCAGGCGG        TTGGTTAATAGCACA 100 46
A1D48_RS13475 2644772 .. 2644787 - -10.4  -2.98823   GGTCGTTGATACACA              CGCTCC TTCG GGAGCG               TTTTTTTTGCCCGAA  73 525
        fadR 2641315 .. 2641326 -  -4.4  -4.27617   GAGATTCGATCAAAA                CTGT CGTC ACAG                 TATAACCTGAGCAAC  66 309
A1D48_RS13445 NONE
        dadX 2637278 .. 2637308 - -14.7  -3.29043   AAGGTCGCCGGACAA       CGTCGACCCGCCC CCGGT GGACCGGTCGACG       CCTTAGCCTGAGTTA 100 43
        emtA 2633600 .. 2633657 - -10.7  -3.14257   GGAAAAATGAAACGA TCACCACTCC-CCGCCTGAGCTTTCGTT TCCTT AACGTTAGCCC-GGCGGTGGAGCGG-GA GTTGCAGCGGATTAT  69 106
A1D48_RS13415 2632520 .. 2632547 -   -12  -2.62184   CGCGTGTTTATAGTA        GGTTGACCCGGC GCTG ACCGGGTCAACG         CTTACACGTTTTGCA  79 45
A1D48_RS13355 2618567 .. 2618582 -  -3.2  -4.43911   AAATGGCAAGTAAAA              TAGCCC TAAT GGGATA               GGCTCTAAGCGTCAA  62 232
        ychH 2614052 .. 2614078 - -10.1  -2.65388   CAGTTAATGGACAAT        GCCCGGT-GGCG ATAA CGCTTACCGGGC         CTGAACCGGTTAGCT  70 35
        hemA 2607948 .. 2607960 -  -2.7  -3.59262   CTTCATAGGCGTAAA                TTCAC CCT GTAAA                AAAGTGTGGTGTGTG  50 44
        prfA NONE
        prmC 2606037 .. 2606047 -  -2.4  -3.05597   GTCATGGCGTAAAAC                 GTCC GCA GGTC                 ACGCGTTCATTGCCA  42 1
A1D48_RS13290 NONE
A1D48_RS13285 NONE
        kdsA 2603889 .. 2603910 - -10.2  -5.36441   GCCTGATATAAAAAA           GCCGGATA GTATCT TATCCGGC            CTACACAAGCTAAAA 100 47
        chaB 2601826 .. 2601840 -  -2.8  -4.37886   CCATTGCCGACAAAA               TTTCTC GAG GAGAAG               GGTTATTCATGCAAA  60 467
A1D48_RS13260 2600062 .. 2600076 -  -5.7  -3.19192   CGCGATGTAACGCAA               CTCAC CCCGC GTGAG               CGCGATATTCTGAAG  54 197
        narK 2596037 .. 2596055 -  -8.8  -5.75342   TGCGGGTAAAAAAAA             GCGCGG TCTAACG CCGCGC             AAAGGATAATCAAAA 100 42
A1D48_RS13235 NONE
        narH NONE
        narJ NONE
        narI 2588989 .. 2589004 - -10.4  -5.73339   ACAACCATAAAAAAA              CTCCGC CGAA GCGGAG               TTTAGAGCATCGAGA 100 46
A1D48_RS13210 2587085 .. 2587103 -  -8.8  -4.02534   AGCGAAAGCGAGAAA             GCGTTGCC GCA GGCAACGA             CCCGAAGGGCGAAGC  76 176
        rssA 2583654 .. 2583671 -  -2.6  -3.23853   TGGCTTTAATCAATA             GTGGCA TGGTAT TGCCGC              TTGCGCCTGTCAGAA  45 68
        rssB 2582542 .. 2582552 -  -5.4   -4.0056   ACAAATACTTATAAA                 TCTG CCG CAGA                 TAGTAACACTCGTCG  63 83
        galU 2581453 .. 2581471 -  -9.5  -5.64274   CCAGGCATAAAAAAA             GCGCCGG ATTTA CCAGCGC             TTCTGTTAAAAAATT 100 53
A1D48_RS13145 2579507 .. 2579524 - -12.7  -3.85864   TTAGCATGACAATAA             CGGCCTC AATT GAGGCCG              TTTTTTTGTTTTACC 100 175
A1D48_RS13135 2575632 .. 2575654 - -11.9  -3.36492   CTGGGAATGTCACAA           GGCGGCCCC CTTAC GGCGCCGCC           TGTAAATCAACAGGT  85 47
        oppA 2573234 .. 2573259 - -16.3  -2.80583   GATGAAAAAAGACAC         CATGGGACAAC CGCA GTTGTCCCATG          TCTTGCCATTAATGT 100 34
        oppB NONE
        oppC NONE
A1D48_RS13110 NONE
        oppF 2569256 .. 2569276 - -12.6  -4.21812   CCTCACCTAAAAGAA            GGGCTGAC GAATT GTCAGCCC            TTGCGATTATAACGG 100 32
A1D48_RS13100 2568042 .. 2568059 -  -3.4   -3.6579   AATGGATCTGAACAA             TCGCCT GACTGA AGACGA              AACGCTTGAGCAGGC  51 365
A1D48_RS24535 2565987 .. 2566007 -    -9  -3.21595   AAGGGCGATTATTAA           CTGCCGGGC CGAT GCCC-GCAG            TGGACAGTAACGATC  65 230
        tonB 2564611 .. 2564639 - -10.3  -2.54504   ACTGGCCAAAGAGAT        CGCGCACGGTC GGGTTGT AACCGTACGCG        TGGAAGGAATGACAT  65 312
        ompW 2561249 .. 2561261 -  -9.1  -2.56271   CGTGTACTACAACAT                GTCGC AAG GCGAC                GATCCGCGAGGTAGC  59 323
A1D48_RS13000 NONE
A1D48_RS12995 2550396 .. 2550411 - -11.8  -2.69188   AACAGGAGAATGAAC              GGCGCG TTGC CGCGCC               ATTTTAAGGCCGCGT  79 60
        rluB 2549400 .. 2549429 - -10.8  -3.14931   CGTAGGCCGGATTAA       GGCGTTTGCGCCG CCATC CGGCACAAAC-CC       TCTTGTCTGATGATT  78 66
        sohB 2546714 .. 2546742 - -16.1  -2.56596   TGGTGGATTAATCCA        TGCCGGATGGC GCTGAAT GCCATCCGGCA        ATAGCGGTTTACATC 100 34
A1D48_RS12960 2543412 .. 2543429 - -14.1  -5.37043   AGGGGATATAAAAAA             GGGCCGC TTAC GCGGCCC              GCTTGACTATAGTGA 100 54
        cysB 2541917 .. 2541928 -    -3  -4.20516   TTGCCAGTGAATAAA                TCAA TCTT TTGA                 CTCAAGATAACTATT  58 169
A1D48_RS12945 NONE
A1D48_RS12940 2541242 .. 2541267 -  -9.1  -4.90136   AACGAAGATGAAAAA         GCCCGATAA ATAACGCA TTATCGGGC          TTTGACGAGATTAGA  93 238
        acnA 2538381 .. 2538411 -  -9.6  -2.84051   CCACCGGTATTAAAG       CGCGGGCCTGCC TGTTTAC GGCAGGCCCGAT       AAACGGCTTTAGTTC  70 34
        pgpB 2536731 .. 2536762 -  -5.2  -3.54543   ATCCAGCCTTCTAAA      TTACCATTTTCCCGC CTC GCGCGAAA-TGGAAA      TGCGCCCGCCATCAG  56 77
A1D48_RS12915 NONE
        lapB 2535071 .. 2535098 -  -2.8  -3.64703   TGCGGCGCAGGGAAA        TTAACAGGTT CGATTGAC AACCTGATAA         GCCCTGGCCGCCGAT  50 107
        pyrF NONE
        yciH 2533461 .. 2533471 -  -5.4  -3.50555   GCGAAATAACAGGAA                 GTGA CTA TCAC                 CTGCGTGATATACCC  57 480
A1D48_RS12845 2523296 .. 2523319 -  -2.4  -5.20534   ATCAATCAATAAAAA          CGATCAATAT ATAA AAAATGATCG           AAAAAAACAATATAT  74 403
A1D48_RS12840 2522169 .. 2522195 -  -7.8  -3.86346   GCACCGGGGCAGAAA         CAGCGTCTGGGC CTG GCCCGCGCGCTG         ATTTTACGCCCTAAA  68 353
        pspA NONE
        pspB NONE
        pspC NONE
        pspD NONE
        pspE 2513966 .. 2513982 - -10.8  -3.80018   CGGAGAGATCAACAA              CGGCGC ATTAA GCGCCG              CGGTTAGTATGAGTA  85 57
A1D48_RS12780 NONE
A1D48_RS12775 2511366 .. 2511400 -  -4.9  -3.65883   CATGACGGAAAAAAC    GGGCGCTG-CGGCGTA AAGC CAGGCAATCAGCGCCC     TGTGGAAGGTCATTT  57 35
A1D48_RS12770 2509689 .. 2509712 - -12.5  -3.28712   GCTCTTTTGTCACAA          GAAGGCCTC TATCCG GAGGCCTTC           TTTTTTTCTACTCTT  90 33
A1D48_RS12760 2507752 .. 2507796 -  -2.8  -3.69354   GCTCAGAACCGGAAA CCCAGGCGCTTTGCCAGTTAA TTCA TCGACTC-CAACCCGCCTGGG TCGTCTCTTTTCACG  51 272
A1D48_RS12750 2505466 .. 2505487 - -11.5  -4.51812   GGTCAGAAGAAGAAA           CTGGCGCTG CAAG CCGCGCCAG            TTCTGAGTTTGGCAG 100 75
A1D48_RS12710 NONE
A1D48_RS12705 2495966 .. 2495977 -  -4.4   -2.9594   ATGGGAAGAAAAGAT                TCTG CTGT CAGA                 TCTATTTCCCCCATA  48 74
A1D48_RS12700 2494520 .. 2494548 -  -7.6  -3.27298   TCTCGCAATTAGCAA        CATCTAAGAG CCAGATTCT CTCTTAGATG        TTATACCGTTTAATG  62 54
A1D48_RS12695 2493589 .. 2493612 - -12.4  -3.61398   TCTGCTCCCTAATAA          CCACACACGG TTGT CCGCGTGCGG           CCTTGTTATCAGGCG  95 34
A1D48_RS12690 2491586 .. 2491604 -  -2.3  -3.55889   ACACAGCAATGAGAA            CG-GCGGC ATCA GGCGCTCG             CTTAATCCCCATGCC  47 460
A1D48_RS12680 2489359 .. 2489381 -  -2.6  -3.60805   ATATTCCACGCTAAA           GCACCCTTTC GTC GTAAAGACGC           CATGATAAGAGCAAA  50 273
A1D48_RS12675 2488410 .. 2488440 - -14.1  -2.75074   GCCAGGCGAATATCA       CACGGTTGCCG TCTACGCTC CGGCAACCGTG       TTAGAAGCTGTTCAT  87 68
A1D48_RS12665 2486927 .. 2486939 -  -5.5  -3.06915   ATGTACTTTACCGAA                TACCG CAA CGGCA                AGATGGATGATTAGG  52 97
A1D48_RS12660 2486599 .. 2486617 -  -5.2  -3.87994   ATTCAGGCCCAGAAA             CTGTCCGG TAC CCATACAG             GACACGGCCTCCCAA  61 54
A1D48_RS12645 2482933 .. 2482945 -  -5.5  -3.29511   TTTATTTGGCGATAA                CCATC AGC GACGG                ATAGCGCGTTTATTC  56 16
A1D48_RS12640 NONE
A1D48_RS12635 2479999 .. 2480013 -  -2.2  -4.52873   TGGTGATAAAAAGAA               TTATAT TAG ACATAA               TAATTAATATAGTTT  61 40
A1D48_RS12630 2479288 .. 2479299 -  -4.4  -3.91597   AGCATATATATTAAA                TGTG GGGG CACA                 CAAGAGAATGCCTGC  59 98
A1D48_RS12615 2477489 .. 2477530 - -13.1  -5.18371   TGCGACAAAATAAAA GATAGC-CGGTGCCCGATAA CGC TTATCGGGCACCGAGGCTTC CCTGTCCGGATGACG 100 63
A1D48_RS12605 2475820 .. 2475830 -  -6.8  -3.04248   GAACACGGCCGAACA                 GGTC ATT GACC                 ATCTGCGCTGCGACC  54 157
        smrA 2472474 .. 2472487 -  -2.3  -4.44245   ATATCAGGCATAAAA               TCGGG TTCG CGCGA                GCTTGCGCTGGCGGT  59 63
A1D48_RS12575 2470924 .. 2470942 -  -7.4  -5.03145   GAACGTGCGAAAAAA             GCGCCT TAGCAAC AGGCGC             TTACCAAACATGTAT  86 43
        zntB 2469622 .. 2469641 -  -9.3  -5.83822   TACAGGCAAAAAAAA            GCCGACT AATCTA AGTCGGC             GTCGTACGAATCAAT 100 215
A1D48_RS12565 NONE
        dbpA 2467929 .. 2467966 -  -9.9  -3.00106   TCGAAGTGAAATAAT   CTGCA-GGCGTCTCAGCA CTC CGCTGAGACGCCATACTA   TCGATCATTTTAATA  71 30
A1D48_RS12545 2462832 .. 2462853 -  -6.7  -3.71527   GTCGAATTATTTAAA           GTATAAAAG CAAT CTTTCATAC            ACAAGAGATAAAAAC  66 65
A1D48_RS12540 NONE
A1D48_RS12535 2462232 .. 2462261 -  -9.3  -2.60496   TGGTGCGCTAAATAC       CCGAGCCCGCA TAAGAGAG TGCGGGCTCAA        ATCAACCATCATCAT  66 44
A1D48_RS12510 2456921 .. 2456934 -  -3.7  -4.24002   GCGTAAACGGTAAAA               CGGTC ACCG GCCCG                GAGCTCAGCTTTGGC  64 336
A1D48_RS12495 NONE
A1D48_RS12490 NONE
A1D48_RS12485 2452223 .. 2452235 -  -6.3  -3.75153   TTCGCCTAATGTAAA                TACGA CCT TCGTA                TTCAAAAATTACCCA  64 83
A1D48_RS12480 2451214 .. 2451235 -  -3.6  -2.99871   TCGCAGATGAAATTA           CTGTCCGC GATCTG GCGGCCAA            CCCTGTTCCGGTGCT  44 491
        hrpA NONE
A1D48_RS12465 2446071 .. 2446087 -  -2.3  -4.06687   AGCTTTTATAAATAA              TTCATCA AAT TTATGAA              ATGGTGGTCGCACTT  55 70
        cybB 2445167 .. 2445204 -  -6.9  -3.14931   GTGACTTTGGAGCAA   CATGGCGCCGTTGCG CTATTTTC CGCCACTACGCCACG    CTCATCGTAAGTACA  59 306
A1D48_RS12425 2437841 .. 2437856 -  -5.4  -3.85362   AACTTAAGGATGAAA              GCATCG CTCA CAATGC               CCTGTTAAAAGCTAA  61 444
A1D48_RS12415 2435495 .. 2435519 -  -3.5   -4.0098   TGGGAAGGTAAATAA          GTTAACAGCCA GTC TGGCTAATAGC          GGTCGTATATTTCGC  58 292
A1D48_RS12405 NONE
A1D48_RS12400 2433282 .. 2433306 - -15.7   -4.5538   AGAAAATTCAGAAAA          GCGCCAGCGGA AAA TCCGCTGGCGG          ATGAATCAGTTATCG 100 31
A1D48_RS12390 2431478 .. 2431511 - -15.3  -3.25823   GCTGTCGGACATTAA     CCGCGCCCGC-GGCTA AAA TAGCCCGCTGGCGCGA     CGCTTACTAAAGGAA 100 32
A1D48_RS12380 2428870 .. 2428888 -  -3.8  -2.62184   CTTCCTTTTACAGTA             TCCTCACA GCC TGTGAAGC             TTACCGCTTTTAAAG  44 35
A1D48_RS12375 2427289 .. 2427301 -  -5.5  -3.79906   TTATGTCGATAAGAA                CCGAC CTA ATCGG                ATGTAAACCTCACGC  61 65
A1D48_RS12370 2425470 .. 2425480 -  -3.2  -3.25356   AGGCAAACTGACTAA                 CGCA TGA TACG                 ATCGTCGACATAACG  46 11
A1D48_RS12365 2424668 .. 2424687 -    -5  -2.74012   CCACTACCCGAATGA            GGTGATGA GTTT TCATCATC             ATTCCCTTTATTGCT  49 33
A1D48_RS12360 2423454 .. 2423474 - -15.5   -4.4084   AATCATACAGGAAAA            GGTCGGGTA TAG TACCCGACC            TTTATATTACTGGGG 100 32
        rimL 2416298 .. 2416309 -  -4.4  -4.25681   ATCGAAGGCAACAAA                GACA ATAA TGTC                 TGGATCTGTGACTGC  66 397
        tehA NONE
        tehB 2413891 .. 2413908 -  -2.7  -2.78863   CAAAGGAAATAATAG             CAAAACG AAAT CATTCTG              GATGCACTAAAAATG  41 118
A1D48_RS12295 2412774 .. 2412829 -  -3.9  -3.55444   CCGCCATTTGTCAAA GCCCG-GAC-GCGCACCCCGATCCAACG CGT CGCTGGTTAGCGGC-CGCCGCCGCAGGC GTTTTTTATTTACTT  51 373
A1D48_RS12285 2411257 .. 2411276 -  -3.5  -3.05384   GTCTTTCTTATCCAA            TAGCAGC GAAATG GCGGCTA             TTGTAGTCAGAAGCG  45 66
A1D48_RS12280 2408844 .. 2408858 -  -3.6  -3.71291   AATAACTTTAAAATA               TACTTC CAG GAAATA               ATGAATTTCGCATGG  51 441
A1D48_RS12265 2406874 .. 2406889 -    -6  -3.15996   CATTATTCAGTAAGA              CCGCAG GTTG CAGCGG               CGGATCACGGGCGTG  57 30
A1D48_RS12260 2406430 .. 2406440 -  -8.2  -2.86391   AGCAGGTAAAGATTA                 GCGG ACA CCGC                 TTAAACAGATGGTTA  61 216
A1D48_RS12255 2405528 .. 2405545 -  -3.5  -4.10161   TATCAGTTGTTAAAA             TTAACAA TGAT TTGCTAA              CTGTTATGGTGCTTC  57 82
A1D48_RS12250 2403972 .. 2404002 -  -6.1  -3.53855   TTTCCTAAAAATAGA      CG-GCGCGCCAGAT GCTC ACCCGGCACACTCG       GGAAATTTAGTCAGG  60 65
        patD 2402148 .. 2402167 -    -5  -3.00022   TTTATTTGACACACA            TCAAGGTT TATC AGCCTTGA             CAGCAAAACGTTCTC  51 340
A1D48_RS12235 2401879 .. 2401907 -  -5.2  -4.57073   GACCTGGCGGAAAAA        CCATGCCCGGTA ACCTG TATCGGGCTTGA        AGTCAGAAAAGCGAA  71 28
A1D48_RS12215 2394487 .. 2394500 -  -4.5  -3.14051   CCAGCTTGATGAACA               CG-CCG CGC CGGACG               CCTGCTGATGAACCA  50 487
A1D48_RS12200 2392440 .. 2392460 -  -7.6     -2.55   CAACATCGCAATCGA            GTCCCGAA GAAGT TTCGGAAC            TTAATTGTAAAAAAG  57 297
A1D48_RS12185 2388204 .. 2388225 - -10.1  -2.80821   CGTTTAAAGAGATGA           CTGGAGGGG TTTC CCCCTCCAT            ACCCTATTTACAGAG  71 33
A1D48_RS12180 2387849 .. 2387859 -  -2.4  -3.01712   GCGTTGCCGCCAACA                 CCGC ATC GCGC                 CCAATGCTTAGTCAG  42 33
A1D48_RS12165 2384983 .. 2385003 -  -3.2  -4.79949   TTTTGAAAAAAATAA           GACAGGCCG GCTA CAGCC-GCC            GGAGGTACGTGGGAT  69 174
        nhoA 2383914 .. 2383944 -    -6  -3.30441   CACCATTCGCGATAA       CCAGCCGGAAAACG TCG CCATCTCCGGCCAG       GCGGTCATTCTGTTT  54 103
        smvA 2371986 .. 2372000 -  -4.2  -2.82742   ACTCGGTCATAAGGA               GTATGC CGT GCAGAC               GTTCACTGGTCGTTG  45 483
        fdnG NONE
        fdxH NONE
        fdnI 2364507 .. 2364532 - -14.1  -4.38171   GACAGCAGATGAAAA         CAAGGCGCTAC GAGG ATAGCGCCTTG          TTTATCAGATCGCGA 100 46
A1D48_RS12065 2359744 .. 2359777 - -10.3  -4.66833   TTTTAAGGCGAAAAA     GTAGACCACGACAAT AGCC ACAGACGTGGTCTAC      GGCGCGTTGAGGTGA  91 144
        hdeB 2359178 .. 2359195 -  -6.2  -4.53036   TCACAAATAGTAAAA             CCCGAC ACACAG GCCGGG              TTTTGATATCAGTTT  76 45
A1D48_RS12055 2358206 .. 2358216 -    -4  -3.24926   CATCCGAAAAACAAG                 CATA GAC TATG                 GGGCTAATTTTTACG  48 96
        treZ NONE
        treY NONE
        glgX 2351675 .. 2351691 - -10.8  -5.52384   GCGCTAGTAAAAAAA              CCGGCC ATCAA GGCCGG              TTGGGTCCGGAGCGC 100 51
A1D48_RS12020 2345962 .. 2345985 -  -5.2  -2.60212   TCACCACCGGACAAG          CCGCTGTGCT TATC AGCAAAGCCG           AAATGATTGTTTGAG  48 102
A1D48_RS12005 2343208 .. 2343224 -  -6.5  -5.64274   GCAGGCATAAAAAAA              CCGGCCA TTG TGACCGA              TTCGTCACTGTCAGT 100 44
A1D48_RS11970 NONE
A1D48_RS11965 2338614 .. 2338645 - -12.3  -4.07885   TACGGCTGTTGAAAA      GGCCGCTGCGAAA ATCGGA TCCCGCAACGGCC       TTTTTAGCATAACGT 100 73
A1D48_RS11960 2338038 .. 2338052 -  -4.2   -3.3334   AATGCCAGCTTATAA               GTCATC AAT GTTGAC               CTCAATGACGCGTTC  50 5
A1D48_RS11955 2337632 .. 2337646 -  -2.8  -4.63218   CGGGCGGGAATAAAA               TGAATG TCA CATACA               CAACGTAGGCCATAG  65 137
A1D48_RS11950 2337153 .. 2337184 - -10.4  -4.72497   TAGGGATGAATAAAA      TAAAACCGGTA-CAC ATA ATGCTACCGGTTTTA      CCGAGAATAAGCATC  91 39
A1D48_RS11935 NONE
A1D48_RS11930 2332586 .. 2332602 -  -5.1   -2.7371   AGGGAACAATAATAT              TTGTGAC GTT GTCACAT              TATTCTGTTTCTGGT  49 25
A1D48_RS11925 2330915 .. 2330946 -  -7.4  -2.63715   ATTTATCGCAGAGGA      TTTTTATCCATCGC AAGC GTGATGGATAAAAT       TATTTAAAATCAGAG  57 55
A1D48_RS11920 NONE
A1D48_RS11915 2328471 .. 2328498 - -13.5  -3.90744   TTTGTCGGTAAATAA        CACCGCATGGC GGATAT GCCATGCGGTA         GAACTCGCCGTAAAT 100 40
A1D48_RS11900 2324498 .. 2324517 -    -5  -3.55563   AGTCGATTTTGCAAA            TCGC-GGAA ATA TCCCGGCGA            GGATAGCGGCCATGC  56 502
        cybH NONE
        hybD NONE
        hypC NONE
A1D48_RS11875 NONE
A1D48_RS11870 NONE
A1D48_RS11865 NONE
        hypA 2318660 .. 2318673 -  -6.7  -4.11751   ATCAATCTGCTAAAA               GATGG CAAC CCATC                GAATCCTAATACAGA  70 218
A1D48_RS11850 2316304 .. 2316330 -    -8  -3.06831   CTAAGCTCGACTTAA         CTGGCGCAGA ATGTTCA TCTGCGCCAT         AACCTGAAGAGCAAA  62 43
A1D48_RS11825 NONE
A1D48_RS11820 2309673 .. 2309687 -  -4.2  -3.40403   TTTCCCGCAGCAGAA               GGCG CATGAGT CGCC               GGAAGCGAAAAGCAA  51 433
        marR NONE
        marA NONE
        marB 2308018 .. 2308036 - -12.4  -5.52986   ACGGTACTAAAAAAA             TGCCCCGC AAA ACGGGGCA             AAGAGGTTAAAGGTG 100 32
        ydeE 2305569 .. 2305588 -  -8.6  -2.53581   TATAGGGTTAACCCA            GTGCGCCAG AAA CTG-CGCAC            ATCACTGGCTGCAGA  63 44
        mgtS 2305205 .. 2305239 - -16.5  -4.55287   GCCATCCAGACAAAA    GCGGCCCCTTGC-GCA ACGA TGCAGCAAGGGGCCGG     CTCTGCGAGGGATTA 100 51
A1D48_RS11770 2303408 .. 2303426 -  -5.2  -5.03145   GAAGCGGGTAAAAAA             GGTGGCCA GAA TAGCCACA             GTGGCGGACGGAAAT  82 171
A1D48_RS24525 2302487 .. 2302497 -  -2.4  -3.72302   TTTACAGGAAAAAAT                 GCGC AAG GCGA                 GTTTATTTAATAAAG  50 450
        ydfG NONE
A1D48_RS11745 2299154 .. 2299164 -  -4.6  -3.41126   TGAGAAAGCGGAGAA                 GGCG TCT CACC                 CCGACGTTAAAGGGG  52 43
        ydfZ 2298742 .. 2298764 - -17.8  -3.10245   GTAGCGCAACAGAGA           CCCGGTAGCA TTA TGCTACCGGG           AAGGCCGGAGCGGTT 100 58
A1D48_RS11710 NONE
        speG 2291867 .. 2291903 -  -7.3  -2.88023   CGATTACTACTAAAC   CG-GGCGCGGT-GCGAC TCTCC GTGACTACCGCGCCGCG   TTTACTGCGCGGTGG  59 27
A1D48_RS11695 2290685 .. 2290697 -  -6.3  -3.14132   CCCCTTTGGGAGTAA                GGATT ATT AATCC                ATGTCAAAGAGCGTT  57 70
A1D48_RS11690 2288129 .. 2288144 -  -3.2  -4.56597   CCGGGCGCGTAAAAA              CGTCCCG GAG CAGG-CG              GCTTAGATTTTTTCG  64 28
A1D48_RS11685 NONE
        dmsB NONE
A1D48_RS11675 2284101 .. 2284118 - -12.7  -2.78349   AAACAATCCCGAAAG             GTGCGGG TCGC CCCGCAC              GCATAAATTAACCTG  82 33
        dmsD 2283440 .. 2283457 -  -8.4  -4.42788   CGCAATGGGAGAAAA             GGCAGG TAAAAT CCTGCC              TTTTGTGGGGATTAA  84 37
        osmY NONE
        osmX NONE
        osmW NONE
        osmV 2279684 .. 2279712 - -12.4  -3.04443   CGTACAATAATGATA        CTGCCGGATAGC GAGAG GCCATCCGGCGG        CAACGTTAGCTGCTT  83 31
        clcB 2277886 .. 2277897 -  -2.2   -4.4846   TAAGCGAAGAAGAAA                GCAGC GTC GC-GC                ATAGCTGTCCTATAA  62 421
A1D48_RS11620 2273854 .. 2273886 - -11.3  -2.90496   CGTGGCGTGAAACCA      GCCCGGCGATAGC GCACGTT GCTATCGCCGGAT      TATTTCTTTTCAGGC  78 35
A1D48_RS11615 2273220 .. 2273238 -  -8.1  -4.57569   TTAGCGCCGTAAAAA            CGGGCGCG GGGG CGCGCC-G             CAGCATGTTACGACT  82 40
A1D48_RS11610 2272129 .. 2272154 - -14.8  -2.62263   ATTTGCCTGAGACGA         TCGCTGCCTG TCGGTT CAGGCAGCGA          TTCCCGCATTAATCC  89 34
A1D48_RS11590 2269905 .. 2269936 -  -6.4  -3.85698   GGCTGCGCTCAGAAA      CCCCGGTCACATCG TTAT CTATGCTCCCGGGG       ATTTCTTCCCTTGCC  64 82
A1D48_RS11575 2265371 .. 2265382 -  -5.8  -3.30124   GTGTAGGCCTGATAA                GGCA GGTA TGCC                 GCCATCCGGCGAGAA  56 62
A1D48_RS11570 2263359 .. 2263374 -  -6.8  -3.73224   GGACTCGTGATTAAA              GCTGCCC TGG GGGC-GC              TGGTCGTCGTATTGA  62 389
        rstA 2262422 .. 2262444 -  -9.1  -3.01712   TCTGTTTTTTGAACA           GTGGCGGTG ATGAG CATCGCCAC           TATGACTTAATAAAG  68 64
       ompS2 2260813 .. 2260831 - -13.8  -5.47846   AATGAAAAAAGAAAA             GCCCGCCA AAA CGGCGGGC             TTGAGAAGAATTAAT 100 47
A1D48_RS11545 NONE
        rstB 2257532 .. 2257547 -  -2.6  -3.25102   ATTTTAGTTACAACA              TACTAT CTGT ATAGCA               CAGTTCCCGCCGCTC  45 60
A1D48_RS11535 2256470 .. 2256494 -  -8.5  -4.07535   AAGGCGCATAAAGAA          GGGCTGACGCT CAA AGCCTCAGCCG          TGGCATTAGGATACC  77 108
        manA 2251909 .. 2251930 -   -13  -4.38116   TCCATAAAAATGAAA           CCAGGCGG ATTAAA CCGCCTGG            AGGAGTTTTACGTCT 100 83
A1D48_RS11515 2250048 .. 2250059 -  -4.4   -3.9941   TTTGTTACAACGAAA                CCAT TGCG ATGG                 GGGCGTGGTTTGGCC  59 343
A1D48_RS11505 2249297 .. 2249307 -  -8.2  -3.96148   GCCTCTCAGGATAAA                 GGGG CAA CCCC                 CCGCCTGTAGACAGT  72 42
A1D48_RS11500 2247995 .. 2248030 -  -7.6  -3.06133   GAACTGGGCATGGAA    TC-GGCAAAACATCGCG CGA CGCTGTGTCTTGCCTGA    GATGTCGCATTTCTC  60 100
         blr 2246424 .. 2246450 -  -3.7   -5.3472   AAAAAATAAACAAAA        CCGCACCAGTGA GAGG TCAG-GGTGCAG         GTAAAAAGGGAATAT  83 232
        ydgT 2246083 .. 2246093 -  -8.2  -3.15544   GGTTACGCGCATTAA                 CGGC CAT GCCG                 CTCATTTTGGGGCAA  64 77
A1D48_RS11480 NONE
        rsxA NONE
        rsxB NONE
        rsxC NONE
        rsxD NONE
        rsxG NONE
A1D48_RS11450 NONE
A1D48_RS11445 2238987 .. 2239000 -  -5.3  -3.80114   CATGAAGTTATCAAA               GTGAT CCTG ATCAC                GGATAGATAGAATTT  59 192
        dtpA 2237015 .. 2237037 - -13.5  -6.17184   ACGAGCAAAAAAAAA           GCCGCTAAC GCACA GTTAGCGGC           CTGAATGTTGTTTCC 100 48
        gstA 2236311 .. 2236340 -  -6.4  -2.93708   TGCTGCTAAAAAGAG       GCCGGATGGC GGTACAGCGA GCTATCCGGC        AACATGACATTAATT  55 35
        slyB 2230657 .. 2230681 -  -3.6   -3.5774   ATTCAATTGGCTAAA         GCGATAGGC ATTGAGCA GCC-ATCGC          TGGTACGCACGTTGG  51 321
A1D48_RS11395 NONE
A1D48_RS11390 NONE
A1D48_RS11385 2227085 .. 2227105 -  -5.3   -4.3665   GAAGTGAAAGATAAA            GCGCTCATG ATC CATGTGGGC            GGCGATAACATGTCC  69 76
A1D48_RS11365 2224685 .. 2224704 -  -6.4  -5.41941   TAAAGGAAATAAAAA            CGCCTG TTACTGCT CAGGCG             TTGCAATGATGGTCT  91 12
A1D48_RS11360 2223504 .. 2223525 -  -7.3  -2.97058   AAGATATTCAAAGTA           TAGCGGC GATGTGAG GCCGCTA            TCAATGAAATTACAG  59 35
        gloA 2223026 .. 2223053 - -14.8   -4.2828   CGGGATGCAGTAAAA        CAACGGGCGCAG TGAC CTGCGCCCGGCG         GGGGATCAGTTACCC 100 31
A1D48_RS11350 NONE
A1D48_RS11345 2221908 .. 2221927 -  -7.9   -5.1101   CCACTATCGAAAAAA            TTCAGCG CCAGAT CGCTGAA             AACCCGATTCTCCTG  91 282
A1D48_RS11335 2220698 .. 2220726 - -13.3  -4.20868   GGCGCAAAAGAAGAA        GTTATCCTGTCGT TAA ACGACAGGATAAA        ATATTAGCGAATTGT 100 29
        sodB 2219991 .. 2220012 - -14.5  -4.07885   TATCCCTCTCTAAAA           CGCAGAAGG CGTA CCTTCTGCG            TACTCAGACTTATGC 100 35
        purR 2218424 .. 2218437 -  -4.5   -4.2558   GACGTGGCAGCAAAA               CGAGGC CTC GCC-CG               CGCTGGCATGGCTGC  66 117
A1D48_RS11305 2216064 .. 2216083 -  -7.1  -2.91276   GGCTTTGTGAGAAAT            CCCACGG GCAATT CCGTGAG             CCAGTTATCCGACGT  59 224
A1D48_RS11300 2214816 .. 2214838 - -13.4  -2.82253   AACGGAAAATAAGAT           TCCCCCGCAT GAA ATGCGGGGGC           GATGATTAGCGAGGA  85 31
        mdtK 2212543 .. 2212562 -   -10  -4.39828   AACATGTCGAGAAAA            TAGCCGCC ATGC GACGGCTA             TCGTCGTATTATCGC  87 34
A1D48_RS11285 NONE
A1D48_RS11280 2211829 .. 2211839 -  -6.8  -3.17392   TAGTGCGTAATCCAA                 CGCA TAT TGCG                 GTTTGTCTCGGCTAT  56 442
A1D48_RS11125 NONE
A1D48_RS11120 2186605 .. 2186620 -  -3.2  -2.78438   TACGACATGGTAAAG              CCCGTT AAAT AAGGGG               ATTCTACTATATCAT  43 181
A1D48_RS11115 2185719 .. 2185733 -  -4.9  -2.94144   CCCTTATTGAAAGTA               CGACG ACTGA CGCCG               ATGGCGCAAAATGTT  50 161
A1D48_RS11110 2184289 .. 2184306 -  -7.7  -5.00616   GGCGTTTCGAAAAAA             TGGCCTC GCCA GAGACCA              GAATACGAACAACGT  91 457
        ttrB NONE
        ttrC NONE
        ttrA 2176714 .. 2176727 -  -2.3  -2.73067   TTCAATCACAGATTA               TGCGG TCAA CCGGA                AGTAACCCCAAATGA  40 263
A1D48_RS11075 NONE
A1D48_RS11070 NONE
A1D48_RS11065 NONE
A1D48_RS11060 2172074 .. 2172097 -  -2.3  -3.43773   GGTGACATCGAAAGA          GCGTGCAGA GGAATG TGTGCTCGC           GTTTCAGCCCAACGG  47 278
A1D48_RS11050 2170489 .. 2170503 -  -8.5  -5.99154   GATTAAATAAAAAAA               GCGCC GGAAG GGCGC               TTTTTTAAACAAATT 100 58
A1D48_RS11045 2169939 .. 2169979 - -17.1  -2.87132   TTGTGTGGTTATATA  GGTAAAAAAAATGGCGCAC GAT GTGCGCCATTTTTATTACG  CAGGTACTATTACTT 100 35
A1D48_RS11040 2169614 .. 2169664 - -15.1  -3.72695   AGCCTTCGCAGCAAA CGACGGACAA-A-AAAATGGCGCAC GAT GTGCGCCATTTTATATTGTGCGTCA AATTATTTACAGATG 100 28
A1D48_RS11000 2160888 .. 2160900 -  -6.2  -3.30124   GTGTAGGCCGGATAA                GGCG TTAGC CGCC                ATCCGGCTATGTTAC  59 277
        ydiK 2155703 .. 2155729 - -15.8  -3.56862   ATAAACGTCGCTAAA         GCATCGGGCGGC AAT GCCGCCCGACGG         GATTATGACTGCTTG 100 28
        rprA 2155299 .. 2155320 -  -9.5  -5.21709   TTTTATATGAAAAAA           GTGATGCTA TAAA TAGCACCAC            CGACACCGTTTCGAC 100 147
A1D48_RS10970 2154780 .. 2154790 -  -5.4  -2.62616   CGATTTTTCATATTA                 TCTG ACT CAGA                 GATGCCGCCTGAACG  50 150
A1D48_RS10965 2153318 .. 2153334 -  -5.1  -3.34239   TATATGTACATAACA              TGGCGTT TAA AATGCCA              GGTTTATTGCATTGA  54 255
A1D48_RS10960 NONE
        ydiB NONE
        aroD 2150152 .. 2150162 -    -4  -3.33696   GCGGCTTTCAATGAA                 TATG GAA CATA                 TTCATGTCAGATAAC  50 92
A1D48_RS10945 NONE
A1D48_RS10940 2147252 .. 2147299 -  -7.9  -2.54801   GACGGCGAAATATAT CTGATTTATTCGGCCTGA-TGCC GTAA AGCAGTCAGGCCGAATAAGAC-G TTCCGGTACGATCCT  59 40
A1D48_RS10930 NONE
A1D48_RS10925 NONE
A1D48_RS10920 NONE
A1D48_RS10915 2142496 .. 2142509 -  -8.1  -3.68222   GGGCAAGCCGAATAA               GACGC CGTA GCGTC                GTTATCCGGTGTTTC  69 47
A1D48_RS10910 2140767 .. 2140796 - -19.3  -3.08283   AGAAGTAGTGTAATA       CCGGATGGCGGCG TTAA CGTCGCCATCCGG        CAATTTATACCGCAG 100 30
        ppsR 2137203 .. 2137214 -  -4.4  -3.80516   AATCAACCCATTAAA                CTAG TTTG CTAG                 TACATCCTGCGGTTA  58 22
        aroH 2135981 .. 2136003 - -15.6  -4.21631   AACGCATCGAAGAAA           CGCCCATCCC GAC AGGATGGGCG           AGCTATTAAAAGCGG 100 31
        hemP 2135625 .. 2135661 -  -2.9  -2.52676   CAGTTGTTCAAGTTA   GC-CTGATGCCAGCAG CATCGT CTGCTGGCGGGAGCGC    TATTTGGTTAACAGT  40 25
A1D48_RS10805 2119846 .. 2119857 -  -5.8  -2.87344   CAGTTGGCTGACAGA                CCGT TTCA ACGG                 TTATCGTCAGCGCGA  51 453
        pfkB 2118196 .. 2118211 - -11.8  -3.01791   ACTGTGTTTTTAACA              GCGGCG GATG CGCCGC               CCGTTAACCGATTTT  81 71
        ghoS 2117835 .. 2117845 -  -4.6  -3.50466   AAAAATACGAACTAA                 CGCA CAT CGCG                 GACGCGCCGCGGCGG  54 50
A1D48_RS10785 2116870 .. 2116892 - -12.1  -4.81851   ATGTAAACTGAAAAA           TGCCGGATA GCCCG TATCCGGCA           TGGGCTGTACCTATA 100 36
        hxpB 2115450 .. 2115474 -  -7.8  -3.53012   TTTGTCTCTGTCAAA         GCCGCT-TGCC GTCT GGCTCAGCGGC          TAATTGCCCGTTGAC  67 58
A1D48_RS10770 2114735 .. 2114746 -  -4.4  -3.30038   TATATTCAAATGGAA                TGGT TTAT ACCA                 AAAATGACTTTGGCG  52 49
A1D48_RS10765 2113148 .. 2113178 -  -9.8  -5.84381   TGACTAAGAAAAAAA       CAAAACGCCGGT ACTGGAG ACCGGCGTTTTT       AGTGACAGACATTTT 100 89
        katE 2110073 .. 2110084 -  -5.8  -3.97947   CGCATCGAGGAGAAA                CCTC TCTG GAGG                 TGATGTGTCATCCGG  65 221
        nadE 2103241 .. 2103267 -  -3.7   -2.7535   GCTGGGAAGAGAGGA         GGCCGGATA GACGAGCGA TATCCGGCA         CAACAGTAGAAGTAC  45 43
         cho 2102189 .. 2102202 -  -3.8  -4.36127   CGCAAGAAGGTAAAA               TGCC TGCTGC GGCA                GAATAACTTTCCGCA  64 106
        xthA NONE
A1D48_RS10655 2093443 .. 2093460 -  -4.1  -3.53012   GGTCGGGCTGGCAAA             CCAGAAC AGTC GTCCTGA              TATTCAGGTGAATGT  51 184
A1D48_RS10645 2091705 .. 2091727 -  -6.9  -4.39746   GAGAAAAGAAAAAGA          GCGCGC-CGC GTAA GCGAGCGGGC           AAAAAAATCCCGCCT  75 100
        sppA 2086019 .. 2086059 -  -8.3  -2.79276   AGGACGTATTAATGA  TTATCGGATGGCGGC TATGAGCAGAC GCCGCCATCCGGTAT  GGCTATTGATGAAGC  64 42
        ansA NONE
        pncA 2083769 .. 2083781 -  -5.5  -5.10033   GGAACAGAAAGAAAA                CAGCC TAC AGCTG                GTGATGCTATGGCAG  82 525
        gapA 2081815 .. 2081832 - -11.3  -5.95166   TTTAAGCAAAAAAAA             GAGCGAC CTGA GTCGCTC              TTACCAATGACTGTG 100 51
A1D48_RS10590 2080553 .. 2080601 -  -3.1  -4.37886   TGACGCCGGATAAAA TGTGTAAGCGCCGCCATCCGGCA GGTTA TGCCTGATGGCG--GCTGACGCC TTTCAGATCCTATAG  62 63
A1D48_RS10570 NONE
A1D48_RS10565 2073551 .. 2073576 - -11.9  -3.91897   CTTGTTAGTGATAAA         TCAGCCCGTGA CTCA TTACGGGCTGA          TTTATGGTTATGCAC  93 33
A1D48_RS10555 NONE
A1D48_RS10550 2070697 .. 2070727 -  -2.5  -4.62069   TCTCTACGTGAAAAA       CGGCGTTGTCA TTAAATTGC CATCAACGCCG       CGTATTGCTAACAGG  65 180
A1D48_RS10540 2070087 .. 2070108 - -11.5  -5.03715   ACCATGTTTAAAAAA           GGCCTGGGG CAGA CGCCAGGCC            AGTATCTGACGGGCG 100 43
A1D48_RS10530 NONE
A1D48_RS10525 2067466 .. 2067478 - -10.5  -3.91716   TTACTGCCGAAAGAA                GCGCC TCG GGCGC                TGTGGCTGGTTACGG  80 148
        yoaK 2066570 .. 2066600 - -14.3  -2.90219   CAGAACTTTCAGAGA       TAATAAAGGCTAC GACAG GTAGCCTTTATTA       TTCAAAATGAATTTA  89 115
A1D48_RS10470 2062219 .. 2062244 - -11.1  -3.41693   TGCATTATTAACGAA         CAGGGGAGGAG TAAC CCCCTCCCTTG          TTTATACCCTTCATA  80 233
A1D48_RS10430 2057109 .. 2057130 - -15.9  -2.52464   GTCGCCGTTAACGCA           CCGGGAACC CATG GGTTCCCGG            TATTGTCGGCAGAGA 100 43
A1D48_RS10400 2051258 .. 2051275 - -14.1  -4.90296   AAAATGGGATAAAAA             GCCGGCG GCAT CGCCGGC              TTACTGTTGTTATTG 100 35
A1D48_RS10395 2050563 .. 2050597 - -13.6  -2.96444   CGCTGGAATAATAAT    GCCTTGCCCGGCGTG CTCTCT CACGCCGGG-ATGGC     CGAAATAGTCATGAT  87 34
A1D48_RS10365 2046900 .. 2046932 - -13.4  -3.05384   GGCCTGGGGATTTAA      CCGCGCCAGAGCGT ATGCA AGACCCTGGCGCGG      TTGGCCGGTGATCGT  86 295
A1D48_RS10345 2044683 .. 2044695 -  -3.4  -3.37344   TTTTTATTCAACGAA                GAGT TAACC ACTC                TTAATAATAATGGAT  47 507
A1D48_RS10335 2044260 .. 2044280 -  -3.9  -4.47707   CGTCAGGAAAAATAA            TGCCAGCTA TAT TTGATGGCA            ATCAAGATTTCCGGA  66 83
        cspF 2043875 .. 2043885 -  -2.6   -4.3129   GAGTCATTAGCAAAA                 TAAA TCC TTTA                 GATTTTCGCTACTGA  60 134
A1D48_RS10325 2042997 .. 2043034 -  -8.4  -3.91084   GCACGTGGAAGTAAA   GGTCGCTAACCTGTTG TTGTGT CATGAGGTTAGCGGCC    CTCTCTTCACAGCGA  76 48
        msgA 2042582 .. 2042599 - -12.7  -2.90763   GTTATATCGTACAGA             CAGCGCC TCAG GGCGCTG              TTTTCGATCGGACAT  82 63
A1D48_RS10315 2041277 .. 2041287 -  -2.4  -3.02023   GTCAGAGAATGAAAT                 GGCG ATT CGCT                 GTCTTCAGGCAGTGC  42 100
A1D48_RS10310 2040449 .. 2040467 -  -2.4  -3.16774   TTACAGAAAATTATA             TCAACCAT ATC AGGATTGA             GGGTATATCAGGCTA  44 392
        rluE NONE
A1D48_RS10270 NONE
A1D48_RS10265 NONE
        mnmA 2034029 .. 2034078 -  -2.8  -4.93877   TTGTATCAAATAAAA TACACTTCATCTTTTAAGCCGC TTTGAG GCGACTTGAATGGTGTTGTGTA TTGAATAATCAGACC  70 34
        hflD NONE
        purB 2031948 .. 2031976 - -12.6   -2.7955   AAACCAGACAAATAG        TCACCCTCTTTC TGAAG AAAAGAGGGTGA        GGCACGCATTATTTA  82 34
        phoP NONE
        phoQ 2029699 .. 2029716 -  -2.6  -2.90723   GGATGCTTAACGAGA             TGCGTG GAAGAA CGCGCA              GAAATGTTTATTCCT  42 33
A1D48_RS10235 2028177 .. 2028192 -  -4.6  -4.34263   CTGGAAGAATATAAA              CGTCGG CAGT CTGACG               TATCAATGGTGTTGT  66 355
        potA NONE
        potB NONE
        sifA 2022147 .. 2022160 -  -6.7  -2.89824   GCAGCAAGGAAGAAG               CAAGC TGCC GCTTG                AAGCCGCGAATTTTA  56 207
        potC 2021241 .. 2021257 -    -5  -2.71011   ACGTCCCCTGAATTA              CGGGCC TTATC GGCCCT              TGGTTTTATCACGAG  49 15
        potD 2019993 .. 2020003 -  -5.4  -2.94032   ACGGTGGAACTAAAT                 CTTG AGC CAAG                 CCAGGTCGGCAGCGA  49 198
A1D48_RS10170 2011358 .. 2011386 - -10.3  -2.85069   AATTTGTAAAGATTA       GGCCGGACG-CA GAGTAA TGACGCCCGGCC        TGACGCTTATGCAAT  72 32
A1D48_RS10165 2010227 .. 2010260 - -12.5  -5.18726   TTGCCACAATAAAAA     GAGAAAGCCTCGCGA TGCA TCGCGAGGCTTTTTT      GTCGGTCAGCTATTC 100 45
        comR 2008997 .. 2009023 -  -7.9  -2.52896   GTACTCTGCAAGTTA         GCCCCTCATTC GCTCA GGCTGAGGGGC         TTTTTTTTATCCGAA  59 51
        fhuE 2000326 .. 2000343 - -12.7  -3.44146   GTTGGGGAGAATTAA             GGCAGCC ATTC GGCTGCC              TTTTTTTAATGGCGC  93 67
A1D48_RS10035 1986747 .. 1986765 -  -5.9   -4.4009   CCCTATGGGATAAAA             CGCACCG TACAT CGGTTCG             TAATACCAATGCTTT  73 248
A1D48_RS10010 1980817 .. 1980834 - -12.7  -5.25803   AAGGGGCATAAAAAA             GCCGACC TGGC GGTCGGC              TTTGTATCAGCATTT 100 44
        flgA NONE
        flgM NONE
        flgN 1969042 .. 1969069 - -10.7  -2.64472   GACGGCGTAAATTCA        GTGCCTGATAGC GCTGT GCTATCAGGC-C        TACAAGGCATTCAGG  74 74
        mdtH 1963561 .. 1963583 -  -5.4  -2.86492   CGACAGGTATCAAAT           CAGGCGCCGG GTT CCAGCATCCG           GCGCGGCGTGCGTTT  51 2
        grxB 1962817 .. 1962839 - -10.6   -4.7657   GAAAAAGCTGAAAAA           GGCGGCAA GAAAGGG TTGCCGCC           TGGCGGGAGTTAGAT  95 35
A1D48_RS09895 1962141 .. 1962156 - -11.8  -5.81412   TGCACGTAAAAAAAA              GGGCGC GAGC GCGCCC               TCCGAAATCAATTGG 100 33
        pyrC NONE
        dinI 1960652 .. 1960667 - -11.8  -5.63517   TGCGCAAATAAAAAA              GCCGGG GCGA CCCGGC               AAACATACATCACTG 100 52
        bssS 1960111 .. 1960126 - -10.4  -2.73799   GCCAGAAATAAGTGA              GGCACC TTAC GGTGCC               TGAGAGAGGGGGAGC  71 49
        solA 1958895 .. 1958913 -  -9.5   -4.1822   GCTTACCTTAATAAA             CAGCCCC TTTAC GGGGCCG             ACAAATTATTGGCTA  84 31
A1D48_RS09870 1958515 .. 1958525 -    -4  -3.44444   GCATAAACACACCAA                 TGAA TAT TTCA                 CGAGAGAATGAAAAT  52 265
A1D48_RS09860 NONE
A1D48_RS09855 1957100 .. 1957111 -  -2.2  -4.67904   TACCAACTGCAAAAA                TGAC GGTT GCCA                 TCTGCTGTTTATCCA  65 273
A1D48_RS09845 1955090 .. 1955109 - -12.2  -4.69464   AAAAGAGGGGAAAAA            TTGCAGCC TGAC GGCTGCAA             TCCTGTCAATAGCGC 100 31
        mdtG NONE
A1D48_RS09830 1953018 .. 1953036 - -10.3  -4.62783   GAGTGAGGTGAAAAA             TACCGGC GTGAT GCCGGTA             TTTTTATAGTGAAAT  91 279
        mdoC 1947400 .. 1947430 -  -8.2  -4.42464   AAGGTGTTAAAGAAA       GAACCCGCTACGCG TTT CTGGCAGCGAGTTC       TGGTACGGTTGGCGG  83 86
        csgD NONE
        csgE NONE
        csgF NONE
        csgG 1940490 .. 1940510 -   -14  -5.86976   TCACAAAATAAAAAA            GCGTGGGG TTCTT CCCCACGC            TTTGTCGTATTCATC 100 39
A1D48_RS09730 1937396 .. 1937411 -  -4.8  -3.35813   TTCTACGTCAATCAA              CTTTTT TAAA AAAAAG               CGCGTTTATACAAAC  54 15
A1D48_RS09725 1937207 .. 1937226 -   -10   -4.9755   ACATATAAGCAAAAA            GCCCGTAC TTCT GTACAGGC             TCTCAACTTAAATAT  93 40
A1D48_RS09720 1937025 .. 1937035 -    -4  -3.46008   AGGACAAAACTAATA                 TTAC ATT GTAA                 GTGATTGATTTTGTA  52 48
A1D48_RS09710 1935218 .. 1935231 -  -2.4  -2.57132   TCCCTCCTTTAGAAG               CCTA TAATAT TAGG                GGAAGATAACTCTCT  39 5
A1D48_RS24520 NONE
A1D48_RS09705 1933951 .. 1933961 -  -2.4  -2.94993   ACGCAGAATAGTAGA                 CCAC TTT GAGG                 GAATTCAGCCCGGAT  41 254
A1D48_RS09700 1933311 .. 1933322 -    -3  -3.32343   CTGACAGTTTCATAA                GATA CCAT TATC                 CACCAGTGTTAACAT  46 247
A1D48_RS09685 1930697 .. 1930716 -  -2.2  -4.33274   TGCAGAGCAGGAAAA            CTAACTATC AAA GA-AGCTAG            AAAATCTTTTAACAA  59 225
        mtfA 1924603 .. 1924615 -  -5.5   -3.3482   CAATTGGTTAATTAA                CCCAC AAA GTGAG                GAATTAATGTTCGGA  56 29
A1D48_RS09635 1924352 .. 1924379 - -13.4  -4.18488   ATGGATGTCAAGAAA        CCCGGTAGGCCT TCGC AGACCAACCGGG         TAAAGATAAGTTCTT 100 89
A1D48_RS09625 1922944 .. 1922967 - -15.4  -4.30995   GTTGTCAGAAAATAA          CTTTGCCCCT GAAC AGGGGCAAAG           GGCAGGCTTTCCGTT 100 73
A1D48_RS09610 NONE
A1D48_RS09605 1921344 .. 1921365 -  -7.3  -2.67803   GCGCGACGAAAGTGA           CGCACTG GTCAGGGG CAGTGCG            CGAAAGATCGCGGAT  57 396
A1D48_RS09600 NONE
A1D48_RS09595 1917979 .. 1918013 - -11.7   -2.5194   TAACTATTGATGAAG     CAATCTTCCTTATAT ATTTA AAATAAGGAAGATTG     ATAGGGTGCACTAAC  79 45
A1D48_RS09580 1914847 .. 1914859 -  -4.1  -4.82901   GTTTGCTGACAAAAA                CAACA AAG CGTTG                AAGTTTTGATCTAAT  71 335
A1D48_RS09575 1914594 .. 1914621 -  -6.2  -5.05782   ATGGATGTCAAAAAA        CCCGGCAAACCT TATC AGATCAACCGGG         TAAAGATAAATTCTT  83 89
A1D48_RS09570 1913844 .. 1913870 -  -3.8  -3.74693   CTTTACGCGACGAAA        GCG-AC-GCACT GGTCG AGTGCAGTACGC        GAAAGATCGCAGACT  55 152
A1D48_RS09550 NONE
A1D48_RS09545 1907685 .. 1907713 -  -9.5  -3.53444   CGAGTGGCGCGCAAA        GCTGGCGCACGTC GGT AAAGCGCACCAGC        CGGTGCTCGCCGTTC  75 496
A1D48_RS09525 1905474 .. 1905484 -    -4  -4.25056   GATCTCATGAATAAA                 TTCT TCG AGAA                 ACTCAATGTCGAGCG  64 174
A1D48_RS09500 1902440 .. 1902467 -  -9.8  -5.00884   ATGGGTGTCAAAAAA        CCCGGCAAACCT TATC AGGTCAACCGGG         TAAAGATAACTTCTT  93 89
A1D48_RS09490 1901643 .. 1901661 -  -3.9   -3.4285   CTACGCAAGGGACAA            GCGGCATT CGAT AATGC-GC             TGACGAAAATCGGCC  49 427
A1D48_RS09460 1897121 .. 1897134 -  -3.7  -2.70932   TTCGCGGGTTAATGA               GGTGC TGGA GCGCC                GTTCCGGAATGCCGG  43 222
        pduA NONE
        pduB NONE
        pduC NONE
        pduD 1873175 .. 1873185 -  -2.4  -3.73224   TTATCCTTTATCAAA                 GTGC CAC GCGC                 AGTTCCTGCGGGTTT  51 10
        pduE NONE
        pduG NONE
        pduH NONE
        pduJ NONE
        pduK NONE
A1D48_RS09295 NONE
        pduM NONE
        pduN NONE
        pduO NONE
        pduP NONE
        pduQ NONE
        pduS NONE
        pduT NONE
        pduU NONE
        pduV NONE
        pduW NONE
        pduX 1859702 .. 1859718 -    -3  -4.30576   TCGCCAGCATGAAAA             GCGA-CT ATGA AGATCGC              GTTGATGACTACATC  62 170
        sopA 1849515 .. 1849534 - -12.2  -2.91264   GGGTCTATTTACAGA            GGGACACA ACGC TGTGTCCC             TTAATTCCATGCGGG  80 52
        sbcB 1847657 .. 1847675 -   -16   -4.4261   TCGGCAATAGTAAAA             CCGGAGGC AGT GCCTCCGG             TTTTTTATCTGCCAT 100 115
A1D48_RS09160 1843897 .. 1843923 - -22.4  -5.75342   GCGCGCCAAAAAAAA         GCCCCCGGAAGA TGA TCTTCCGGGGGC         TTTCTCATGCGTTCA 100 66
        hisG NONE
        hisD NONE
        hisC NONE
        hisB 1839384 .. 1839398 -    -5  -2.71011   AGCCGGTGTCAAGGA               TGACGA CGT TCATCA               CAGCACTCCTTTCGA  49 23
        hisH NONE
A1D48_RS09130 NONE
        hisF NONE
A1D48_RS09120 1836680 .. 1836694 - -12.8  -5.14563   TTTCTCATTAAAAAA               CCGGGC ATT GCCCGG               TTTTTTTACGCTTAT 100 37
A1D48_RS08930 1793072 .. 1793112 - -15.5  -2.71791   AGTTTTTGGCCAAAG GGCAGAGCCGGATGGCGAG GCTAA CGCGCC-TCCGGC-CTGCC TGGTAAGCAGGCCGG  93 57
A1D48_RS08910 1786418 .. 1786430 -  -6.9  -3.94002   GATTACTTAATTAAA                CAGCG CTT CGCCG                GGATGACGGCCGCGC  68 124
        yegD 1784010 .. 1784029 - -11.4  -3.71649   CGCTGAAACGGGAAA            GCCCCTCC CGAG GAAGGGGC             CAAAATAAGGAAAGG  91 202
        mdtA 1782518 .. 1782528 -  -6.8  -3.08679   TGCCCGGAGGTAATA                 CCTG CAT CAGG                 CGCGCGCTCCTTTTT  58 21
        mdtB 1779396 .. 1779407 -  -3.6  -4.66264   GAAAAGGGCGAAAAA                GCGC ATCT ACGC                 CTCCTCTTTATGGCG  66 20
        mdtC NONE
A1D48_RS08870 NONE
        baeS NONE
        baeR 1772753 .. 1772763 -  -5.4  -3.63744   CGTTGGCGGAAAATA                 TCGT CTT ACGA                 CCTTGTTATTGTTAT  59 52
A1D48_RS08850 NONE
A1D48_RS08845 NONE
A1D48_RS08840 NONE
A1D48_RS08835 1767253 .. 1767263 -  -2.6  -3.50047   CTTACAAATTGATAA                 TTTA TAA TAAA                 ATTGGAGAGTCTGAT  47 519
A1D48_RS08755 1754167 .. 1754198 -  -9.5  -5.22943   ATTAAACGCAAAAAA      TAAGCCTGCGTAA GGGAGA TTACGCAGGCCAA       GGAGGTGGTTCCTGG 100 159
A1D48_RS08750 1752512 .. 1752522 -  -5.4  -2.83371   TATCTTACTAACAAG                 CACT AAC AGTG                 AGTATATAATGATAT  47 339
        yegS 1750426 .. 1750447 - -11.6  -4.78572   GTTCAACGAAGAAAA           GCCGGATG TGAGCG CATCCGGC            CAGCGACAGGTGTTA 100 41
A1D48_RS08725 NONE
A1D48_RS08720 NONE
A1D48_RS08715 1745786 .. 1745835 -  -8.6  -3.62864   CAAATGGATGGTAAA GTGCCGGTGCTGGTGATTAAGCA GGTGG CGCTCGATCAGCAGCAGCGGC-C TATTGAATACAGCAT  68 60
        rcnB 1742592 .. 1742623 - -12.4   -2.6175   GATAGGTGAATGAAC      TTCCGGTCACTTAC AATA ATAAGTGACCGGGA       TGACAATTTTTCTGC  81 208
        metG 1733579 .. 1733596 - -12.7  -5.03145   TAAGCGGTTAAAAAA             GCCGGAG CATG CTCCGGC              TTGTTGCTTATTTCA 100 33
A1D48_RS08655 1732842 .. 1732861 - -11.4  -5.01553   AATTCATAAAGAAAA            GACGCTGC CGAA GCAGCGCC             CTGAGCGACTTTACC 100 69
A1D48_RS08650 1731894 .. 1731909 -    -4  -3.37685   AAAACGCGGCAAAGA              TG-AGGC GGC GCCTGCA              TTGACGGCGGAACGT  49 319
        mlrA NONE
A1D48_RS08625 1727666 .. 1727701 -  -4.5  -2.62184   CCCTGGTGGAGACTA    TCGCCGCCGTCGG GCAGACCTTT CCGCCGGTGGCGG     TACTGGCGATCGCGG  44 434
A1D48_RS08595 1719793 .. 1719809 -  -6.5   -5.2197   TATAAAAAGCAAAAA              GCCGC GCAAATG GCGGC              AGCCAGCGCCAGTGC  91 126
A1D48_RS08575 1717377 .. 1717420 -  -5.8  -4.46233   TCAACGCCAAATAAA CGCCGGGTGCCGGATGGC GGCGTTAT GCCATCCGGATACCATCG GGTTTAACGGGCCTC  72 29
        yohP 1714672 .. 1714708 - -10.8  -3.30771   CTACAGCGTCCAGAA    CGTGTGCCGGGCAG ATACTATCA CTGCCCGGCGCAGG    AATCAGAAAATCATC  80 28
A1D48_RS08525 1707492 .. 1707502 -  -2.6  -3.55447   GGATTCATCATACAA                 TTAA ACG TTAA                 AACGTGCTACCGATC  48 110
A1D48_RS08520 NONE
A1D48_RS08515 1706240 .. 1706252 -  -7.7  -3.22106   AACAATGTAATGGAA                CCGTA GTT TACGG                GCCTGCTATGTCTTA  64 138
         cdd 1705295 .. 1705308 -  -8.1  -3.30243   AGTCAGGCCGGATAA               GACGC CAGT GCGTC                GCTATCCGGCACATT  65 44
        sanA NONE
A1D48_RS08500 1704022 .. 1704034 -  -2.6  -3.70505   TAAATTAAGGCGAAA                CGCA AATAA CGCG                TTTTAATGATCTAAA  50 180
A1D48_RS08495 NONE
        preA 1701473 .. 1701499 -   -13  -3.54475   TTGCTTATCAGATAA        CCCGGCGCAGC GAAACT GC-GCGCCGGG         CTTCATACCGTGAGC 100 40
        fghA 1693056 .. 1693068 -  -9.1  -2.74012   GGAGGAGGTGAACTA                CAGCG CGG CGCTG                GAAAATTCATTATGT  66 35
        serB 1690234 .. 1690245 -    -3  -2.59431   TCGCGTTATAATTCA                TCTT CAAT AAGA                 AAAAGAAGCAATTCG  40 4
A1D48_RS08430 1688832 .. 1688864 - -19.2  -2.98823   CGTTTCTGACAGAGA      CTGGCGACAGCCGC GTTTT GCCGCTGTCGCCAG      AATGTTATAACCGAT 100 30
A1D48_RS08405 1682758 .. 1682770 -  -4.1  -3.21218   ACGGTTCATTACGAA                CGCTA TGA TAACG                GGTTAACAGGCGTGA  48 52
A1D48_RS08400 1681805 .. 1681842 - -12.9   -3.6944   GGCGTAAGAGAAACA   CGCTAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTATTG    CCTGAAGAACATTGA 100 44
        setB 1676180 .. 1676200 -  -2.6  -4.83615   TAGCGTGCATAAAAA            TATGTTAC AAACG GAAACATA            TGCAAAGCTATCATT  72 298
        yeiP 1674039 .. 1674071 -    -4  -5.10665   AGTCAATAAAGAAAA     GGGTCAGGCTGCGCC CTGG GGCGCAGCC-GAAAA      ATGCGAAACTTAATC  76 35
A1D48_RS08355 NONE
A1D48_RS08350 1672083 .. 1672118 - -13.6  -4.01853   GAATATCATCATAAA    TTACCTTCAACGAT-GT AAA ACTATCGCTGAAGGTAA    TGTTAATTGTATGGG 100 41
        mepS 1671079 .. 1671096 - -11.3  -4.59414   GGATAATAAGCAAAA             GCACTGC CGAA GCAGTGC              TTTTTATGCCGTCTC 100 77
A1D48_RS08335 1669224 .. 1669236 -  -3.3  -2.96444   TCGCTGAATAATAAG                TGACG TTG CGTCT                GATGTGAATCCGTTA  44 55
A1D48_RS08330 NONE
A1D48_RS08325 NONE
A1D48_RS08320 NONE
        yejF 1663384 .. 1663397 -  -4.5  -4.09864   ACCGATTCCGCAAAA               CGG-GC AGA GCACCG               AGAATAGTCTGGTGG  62 262
A1D48_RS08290 1658965 .. 1658994 -  -4.9  -3.61517   ATCTCTCTTTAATAA       TTCCTGCTACAGG CGAC CCAGCAACAGGTA        AGTGATCTGCTTTGC  57 101
        rplY 1658623 .. 1658638 - -11.8  -5.68039   AAACGCATAAAAAAA              CCCCGC CGGG GCGGGG               TTTTTCTTCAACTTC 100 48
A1D48_RS08270 NONE
        pbgA NONE
A1D48_RS08260 1654514 .. 1654531 -  -9.1  -5.64274   GTAGGCATAAAAAAA             CCAGCCC TGAG AGGCTGG              TTTTTAAGGGGAATT 100 42
A1D48_RS08255 1654261 .. 1654284 -  -2.4  -4.24413   GTTAGTAACAAAGAA          GTGGTAAGCT GTTT ACCTTACCAG           AACGTTTTATTATTG  57 59
        narP 1651786 .. 1651796 -  -8.2  -4.62069   CCTGGACCCGAAAAA                 CCGC GAT GCGG                 CGCTGGGCTACGCGG  87 326
         eco 1638425 .. 1638435 -  -8.2  -5.49809   GAAAGGGCAAAAAAA                 GCGC ATT GCGC                 TGCTGCTGGCGCTGG 100 483
        rcsD NONE
        rcsB 1628721 .. 1628749 -  -6.6  -5.24129   CGCGGGCATAAAAAA       TGCCGGA-TGGCG GCGT CGCCTGTCCGGCC        TGTAAAAGATGAGTC  87 95
A1D48_RS08080 NONE
A1D48_RS08075 1618329 .. 1618339 -    -4  -6.24157   ATTCATAAAAAAAAA                 TCAA AAT TTGA                 TCGAATGCTGATTTC 100 105
        nrdA 1615756 .. 1615773 -  -3.4  -2.71144   TAGGCCGGGTAAGCA             TAGCGC TACCCG GCACTA              TTCATCAGATCTTAC  43 30
A1D48_RS08065 NONE
        yfaE 1613807 .. 1613818 -  -5.8  -3.06183   GTGAGCTGGATTTAA                TGGC GGCG GCCA                 GTAATTTCCTGCTGT  52 488
A1D48_RS08050 1611956 .. 1611992 -  -9.4  -2.54523   CCATAGTCGAAGTGA   CGCGCCGGATGAGGGCA TAAA CGCC-TCATCCGGCCTG    GCGCAACGTTTGCCA  68 82
        glpA NONE
        glpB NONE
        glpC 1605135 .. 1605155 - -18.3  -3.07043   GTGAGTAGGGTAATA            GCGCCGGAG GGA CTCCGGCGC            TTTTTACTTAGCCGA 100 33
        sseL 1603419 .. 1603430 -  -5.8  -4.88067   AGTTATTGAGAAAAA                TGCC GGAT GGCA                 CGTATGCCTTACGCG  83 310
        nudI 1596406 .. 1596425 -  -9.3  -3.76413   TGTTAAAAGCGTAAA            GACAGCC TGAAGC GGCTGTC             GTCATTATAATAACC  77 30
        arnB NONE
        arnC NONE
A1D48_RS07955 NONE
A1D48_RS07950 NONE
        arnT NONE
        arnE NONE
        arnF 1587716 .. 1587739 -  -2.3  -4.78149   GTCAGAACTGAAAAA          CGGAGGGAT TAAAAT ATCTCGCCG           TGCGCTCCAGCAGTG  68 415
         rbn NONE
A1D48_RS07880 1577768 .. 1577806 -   -11  -3.14132   GGCTTGTCTCACTAA   GCGTCAGGGGATGCCT GTACTGT AGGCATCCCCTGTTAC   GTCAGGCGCTTTTGC  78 27
A1D48_RS07785 1547038 .. 1547061 -   -14  -3.20348   GGGATGAAGATGCAA          TTCAGGCTAC CGAA GTAGCCTGAA           TTTAAGATTATTGAT  93 33
A1D48_RS07780 1546300 .. 1546327 - -10.6  -4.07568   CCCCTGGCTGGAAAA        GGCCTGAT-GGCG CTA CGCTTATCAGGCC        TACGGGAAGAACGGT  86 74
A1D48_RS07750 1541106 .. 1541133 - -16.4  -4.37886   GGACGGGTTACAAAA        CAGCACCGCCAGC GAG GCTGGCGGTG-TG        AAATCAGGCAGTCAG 100 29
A1D48_RS07745 1538882 .. 1538893 -  -7.2  -3.30124   CTGTAGGCCGGACAA                GGCG TTCA CGCC                 GATCCGGCATTAGCT  63 48
        yfcC 1536923 .. 1536939 -  -5.7  -5.03715   ACTACGCGGAAAAAA              CGCGGCG TAT CGTCACG              TGTGAAAACCACAGC  84 266
A1D48_RS07705 1531833 .. 1531847 -  -6.4  -4.66833   CCGCAACGCCAAAAA               CGAAGC CGC GCTTCA               GGAGAAACCGGAAGA  78 56
        yfcG 1529099 .. 1529115 -  -5.1   -2.6381   AGAATCTGCATATGA              CCTCC AGAGTAG GGAGG              ATTTCCTCTTCCCTA  48 130
A1D48_RS07680 1528155 .. 1528180 -  -8.9  -4.54026   GCTGAAATAAAAGAA         GCCCGGC-GGCG CAT CGCTTACCGGGC         AGGATACGGCGCTTT  88 46
A1D48_RS07620 1515941 .. 1515956 -  -3.2  -3.48474   GAAATGCATAACGAA              GGCTAA TGGC TTTGCC               AGCGGCGCGATGCCG  50 51
A1D48_RS07570 1505497 .. 1505518 - -14.5  -3.54424   GTGGAGGTTGTGAAA           CGCGTACCT GCAC AGGTACGCG            GTACGGCGCTCGGCG  95 192
A1D48_RS07555 1503416 .. 1503442 -  -7.8  -2.64243   GTAGATGGTATATGA         GGGCCTGGCTGC CCG GTAGCCCGGGCC         GGCCCACATATCGCG  59 184
A1D48_RS07545 1502805 .. 1502824 -  -6.4  -3.68569   TCAGCGACGGAATAA            GCGCCT GATGCAAG AGGCGC             TTTAACCTCTCCGGT  62 72
        mnmC 1498538 .. 1498573 -  -6.9  -4.60924   CAAAGTCTGGAAAAA   GCGATCGGCGCCGGCGA ACTG TCGCCG-CGC-GATCAG    GCGTTAGTCAAAGCG  78 128
        smrB 1493330 .. 1493341 -  -7.2  -3.30124   TCGTAGGCTGGATAA                GGCG CTTG CGCC                 GCCATCCGGCAATTC  63 45
        fadL 1486927 .. 1486945 - -10.3  -5.33405   GGCAGTAAATAAAAA             GGTGAGC GCAAT GCTCACC             TTTTTGATCCGTCTC 100 50
A1D48_RS07460 NONE
A1D48_RS07455 1484341 .. 1484372 -  -8.9  -3.55761   CAGCGACTGGGTAAA      TGCGCATGATAATG ACGAA CACTA-CATGCGCA      AACTTACCTTCCGTG  68 427
        pgtP 1477091 .. 1477139 - -26.9  -2.69151   TTTGGGTATATACGA TGTCAGGGAACAGAAGCGCCGAC AAT GTCGGCGCTTCTGTTCCCCGGGA AGGCTAATCGTTTAT 100 37
        lpxP 1475213 .. 1475224 -  -7.2  -5.22137   AATGACAAAATAAAA                GGCC TTGC GGCC                 TTTTTCAGATGTAGA  91 30
        ypdK 1474715 .. 1474734 - -13.6  -4.28487   GAGTAGAAAAGCAAA            CAGGAGCC CCAT GGCTCCTG             TTTTTCTTTGCATTG 100 43
A1D48_RS07390 1470047 .. 1470102 -  -9.1  -3.61398   CCTGCTGCTCAACAA TGACGGCTATACCG-TAGAGCGCGCCA TTCA CGGCGCGGCCCAGCGGTATAAC-GACA TCGCGAGCTGGAACT  68 263
        mgrA 1467496 .. 1467507 -  -3.6  -4.07885   CATTTTTTGCTAAAA                CCGG CCCT CCAG                 AATAGCGTCAATTTC  57 8
A1D48_RS07370 1467001 .. 1467036 -  -7.7  -3.74227   ATAAAGACAGAAAGA   TAGCAGGCCCGATG-CG TGGG CGTCATCGGGC-TGTTA    TTCAGCAGGAGGCTT  71 39
        nupC 1464165 .. 1464182 - -12.7  -5.61596   AGCGGCATAAAAAAA             CCGGGGA TAGC TCCCCGG              TTTCTACATTAAACG 100 46
A1D48_RS07335 NONE
A1D48_RS07330 1460563 .. 1460591 - -13.3  -3.82946   CCAGCTGAAACAGAA        TAAACGGCAGG GCAGACG CCTGCCGTTTA        TTATTTGTTAGTCCG 100 33
A1D48_RS07320 NONE
A1D48_RS07315 NONE
A1D48_RS07310 NONE
A1D48_RS07305 1458451 .. 1458465 -  -8.5  -5.24989   GCAGATAGCAAAAAA               GCGCC TTTAG GGCGC               TTTTTTACATTGGTG  95 36
A1D48_RS07280 1453899 .. 1453913 -  -4.9  -3.37522   AGGCCAGCGAATTAA               CCGCC GCGAG GGCGA               AAGATCCGCTGTATC  54 110
A1D48_RS07270 1451676 .. 1451690 -  -7.1   -3.1876   AATGTCATTGATGAA               GCGGA AATGA TCCGC               TTACTGGGTGCCTGA  62 257
        cysZ 1447597 .. 1447622 -  -9.1  -3.10715   GTTATCAGTATGGAA         TAAGAGACAGC ATAA GCCATCTCTTA          TTTATACATTTTTAC  68 42
        cysK 1446460 .. 1446475 -  -6.8  -5.26316   GCAGGCCACAAAAAA              GCACCC AAAA AGGTGC               TTTTTTACGCGTTTT  87 54
        ptsH 1445847 .. 1445874 -    -2  -4.11692   GACTGATTTTTAAAA        GAACCCG-GAAAA AAA CTTACTCGAGTTC        CGCCATCAGTTTGAC  55 14
        ptsI NONE
A1D48_RS07230 1443500 .. 1443517 - -12.7  -5.85178   AACAGGCAAAAAAAA             TGGCGCC CAAA GGCGCCA              TTCTTCACTGCGGCA 100 45
        ptsJ NONE
A1D48_RS07210 NONE
A1D48_RS07205 1439400 .. 1439418 -  -4.6  -2.88663   ATTCATTTCTATACA             CCAGTTAT AAT ACAACTAG             TTAATCCGATAAGAA  48 341
        amiA NONE
        hemF NONE
A1D48_RS07125 1426379 .. 1426396 -  -2.7  -3.45945   TTTATCTACAATGAA             CTCGT TTATTTCT ACGAG              CCTGCTTTTATTCAA  48 37
A1D48_RS07120 1424924 .. 1424965 - -10.2  -2.57931   GGTAGCCCGGACAAG GCACGCCA-GCGC-CGCCTC CGGG GAAGCGCGCGCACAACGTGC AAAATAGTTTTGTCA  70 62
         tal NONE
         tkt 1404013 .. 1404051 - -15.5  -2.63901   AGTCTACGAAGTAAT   TTTGCACAGCCTACAGA ACAGG TCTGCAGACTGCGCAAA   GTCTGTGTTGCTAAC  93 48
A1D48_RS06995 1400119 .. 1400132 -  -8.1  -3.04144   GGTCGACGTTTAACA               GGCCT GATG AGGCC                AATCTTAGTATTGAA  62 301
        narQ 1396077 .. 1396090 -  -3.7  -3.57561   TGCCAACGCCGGAAA               GCCTG ACAT CTGGC                CTTCCGGCGATTTGC  53 47
        acrD 1392753 .. 1392773 -    -9  -4.78237   TAGGGGATAAGAAAA            GGCGACTC AACGA AAGTCGCC            TTTTTTGTGCCCGAC  90 66
A1D48_RS06960 NONE
        dapE NONE
A1D48_RS06950 1390094 .. 1390108 -  -5.6  -4.09864   AGCGACGCGGGAAAA               CGGCTG GCG CAGCAG               GAACACCGACGTTTG  65 442
A1D48_RS06920 NONE
A1D48_RS06915 1383189 .. 1383200 -  -7.2  -3.02144   GTATTTGCGGCAAGA                CGCC GATT GGCG                 TCGCCAGAGTGGCGA  57 290
A1D48_RS06890 NONE
        arsC 1376312 .. 1376327 - -11.8  -3.12668   CCTGAAACTGTAATA              CGCCGC GACG GCGGCG               TTCAACGGTTAACCG  81 34
        purM NONE
        purN 1371361 .. 1371392 -  -4.4  -2.96152   GAAGGGAAAAGAGTA      GGCCGGATAGGCA TTTATGC CGCC-ATCCGGCA      AGCAGACGCAGTCCT  48 54
        ppk1 NONE
         ppx 1367586 .. 1367612 -   -18  -3.78022   CTGAGATTCAGTAAA         GGCAGACGCCGC GGC GCGGCGTCTGGC         CCACAATTTACGCGG 100 33
A1D48_RS06835 1364635 .. 1364661 -    -3  -5.21709   TTTTAGACTAAAAAA         CAAAGCATTAGA TAA TACGATGCTTTG         TTTTTATCGGTTCAT  76 131
A1D48_RS06830 NONE
A1D48_RS06825 1363408 .. 1363425 -  -9.1   -4.1523   GCGACCAGACAGAAA             CCTCCGC TCAC GCAGAGG              TTTTTTACTGGTCAT  80 56
A1D48_RS06815 1361122 .. 1361132 -  -5.4  -3.87994   ACTGACCGGGATAAA                 CTTC CGC GAAG                 CTTTCGCCCGCAGCG  63 511
A1D48_RS06795 NONE
A1D48_RS06790 1359567 .. 1359586 -  -9.3   -3.2352   TAAAAGTGAATTTAA            CCCTCTG TTTTTG CAGAGGG             TTTTTATTTATGTGC  70 489
        xseA 1350535 .. 1350557 - -12.7  -4.57474   GTAAGTTAGACAAAA          CCGGGC-GGG TATT CCCTGCCCGG           TTTTGAGGCGAATGA 100 153
        sseA 1312274 .. 1312286 -  -3.3  -2.59177   ATGGCAGATATTAAG                CGGGT TCA ACCGG                TAAATCGGTACGCGC  42 8
A1D48_RS06620 1311239 .. 1311254 - -10.4  -5.67967   ACCAGCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGGCCTG 100 126
        suhB 1300939 .. 1300964 - -16.9  -2.74784   ACGCCTGAAAAGGCA         CGGCGGATGAG TGGC CCCATCCGCCG          AAGAGACTTAGCGCT 100 33
A1D48_RS06545 1299939 .. 1299951 -  -5.5  -3.03028   AAATATGCATATATA                CAGCG TTG CGCTA                TTTAGCGGATAGCGC  52 23
        asrA NONE
        asrB NONE
A1D48_RS06530 1296405 .. 1296428 -  -2.4  -4.82901   GGCGGGCCATAAAAA          GGTTACGC-GC GCT GCTACGTAAAC          CTGTCTTTATCGCTT  68 475
        csiE 1293501 .. 1293519 -    -3  -4.72272   TGCCCTGAGTAAAAA             GCTATTCC GCC GGTTTAGC             GCCCGCGACTTGCTG  70 365
        hmpA 1289710 .. 1289737 -  -6.9   -4.2679   GAACGGGGAGGAAAA        CGGGCGTTCGC CTTAAC GATAACGCCCG         TTTTTTCAGAGGATT  72 49
A1D48_RS06495 1287978 .. 1288011 -  -9.1  -4.38154   ATATTTTTCACAAAA     TAAAAGCGAAAAATT TAAT ATCTTTTCGCTTTTA      TTTGTCATGGTTTAG  85 49
        cadB 1286279 .. 1286293 -  -2.7  -3.53012   CTTGTTCCTGGTAAA               GTGGG CCCCT CCCGC               TACGCTATAGCAGGT  48 75
A1D48_RS06485 1284086 .. 1284107 - -14.5  -5.00616   TGCTGCGTGAAAAAA           GGGAAGTGG CAAG CCACTTCCC            TTTGGTACTTATTTC 100 34
A1D48_RS06480 1282534 .. 1282544 -  -2.4  -3.62597   CGTACTGGCGAAGAA                 GACG ACG CGGC                 TATCTGATGTGCCGA  49 81
        mltF 1272032 .. 1272044 - -10.5  -4.65895   CGCGCGATGCAAAAA                CCGGC GCG GCCGG                ATCGCTAATTGATGT  95 251
A1D48_RS06420 1267725 .. 1267751 -  -2.2  -3.61178   TTGATTCACGCGAAA         GAAGCGCAATAA ACT TGATGGCTCTTC         TGCATGAGGCGGAAG  49 49
A1D48_RS06405 NONE
A1D48_RS06400 1264027 .. 1264038 -  -3.6  -4.10161   GATGAGCTGGGAAAA                CCAC GTTT GCGG                 CTGTGGGGCGAGGCG  60 248
        nadB 1252525 .. 1252539 -  -4.9  -3.66908   GTTGCGGAAAACGAA               GCGCG CTTGC CGCAC               CGGGTTTTGCTCGCA  55 139
        srmB 1250439 .. 1250460 - -14.5  -5.80817   TGGAAGATAAAAAAA           TGCCGGGTT AACG AACCCGGCA            TTATCATCACTCTTC 100 32
        eamB 1248819 .. 1248843 - -14.3  -3.94877   ATCCGGTAATAACAA          GCGGAAGAGGC CGG GCCTTTTCCGC          TTTTGTTTTATTTGG 100 42
A1D48_RS06295 1247359 .. 1247372 -  -9.5  -3.48276   CGCCCGGTCAGACAA               GGCGC TTTC GCGCC                GTTATCCGGGCGATA  75 60
        trxC 1245604 .. 1245624 - -14.7  -4.16943   TGGCAGAGGTGAAAA            CGGGGCACA AGA TGCGCCCCG            TGGCGTTTACAGCGC 100 32
A1D48_RS06280 NONE
         pat 1242109 .. 1242133 -  -2.1  -2.74269   TGCAGACGACATAAG          CGAGCAATAAT AAC ATCAGTACCCG          TTAAAGTGGTCAACA  40 56
        pssA 1240671 .. 1240687 -  -9.4  -4.66938   ACTCCTAAGAGAAAA              CCCCGT ACAGG ACGGGG              CTTCGATTACAGGAT  91 32
A1D48_RS06265 1240117 .. 1240130 -  -3.8  -2.74144   GCGGGATCCTGAAAG               CGGA GATGTT TCCG                GCGCAGGTTCGCGCC  43 223
        bamD NONE
A1D48_RS24495 1227026 .. 1227043 -  -2.7  -3.11222   TCTTAATGTCAAAAT             GTGTGAT GTAA ATCACAT              TATTTTGTCACTTTT  43 87
        raiA 1226584 .. 1226599 - -11.8   -5.4505   CCTGTCAACAAAAAA              CGCGCC CGAA GGCGCG               TTGGCGATACACTCA 100 51
A1D48_RS06200 1226405 .. 1226425 -   -14   -5.5112   GTTATCAATAAAAAA            GGCCTCCC GGTGG GGGAGGCC            TTCTTGTTCGTCTTC 100 49
        pheA 1225028 .. 1225044 - -12.3   -3.0497   AGAGCAGCTGGAAGA              GTACCGG TTG CCGGTAC              GTTGTCCGACGATGG  76 195
A1D48_RS06175 NONE
        dgcN 1219799 .. 1219821 -  -6.8  -4.30995   GCTTGTAGAAAAGAA           GGGGCTGGCA TTA CGCTGGCCCC           TTTTTTATGGGTTTG  74 119
A1D48_RS06135 NONE
A1D48_RS06130 1213781 .. 1213798 - -11.3    -5.252   GACGGCGATAAAAAA             GGCGAAC CGGA GTTCGCC              ATTGTGTTACTCCGC 100 32
A1D48_RS06125 1212584 .. 1212626 -  -2.7  -5.14563   CGCGCGATGAAAAAA TTGCGAATCTGGAAGTTCAG CTTG CAGAAGC-CCAGACTCGCGA ACGCGACACCGTGTT  79 478
        nadK 1211406 .. 1211434 -  -3.3  -3.92178   ATGACTGTAATTAAA        TACAGTATAAA CTGGTTT TTTATACAGTA        AAGAGGCTAACGTAA  55 43
        recN NONE
        bamE 1208945 .. 1208962 -  -6.3  -4.07687   AGTCGTCCGGTAAAA             CT-CACCG ATA CGGTGCAG             GATGGCGATCGGGTT  67 281
        smpB 1207622 .. 1207650 - -13.3  -2.53613   ATGAGATATGAATAT        TGACCAGCTTC ATACTGA GAAGCTGGTCA        CAAAAAATGTCTATT  84 39
        bapA 1195574 .. 1195591 -  -2.5  -3.14132   GGGCTTTTTTATCAA             CCGCCGG TTAT CAGGTGG              TTGTTCTGCAACAGA  45 4
A1D48_RS06075 NONE
A1D48_RS06070 NONE
A1D48_RS06065 NONE
        ssrA 1190241 .. 1190266 - -16.1   -5.4492   GACAGACACAAAAAA         GCCCGCAGGGC TTGT GCCATGCGGGC          TTTCAGGACTTCATC 100 73
A1D48_RS06045 1185941 .. 1185951 -  -2.4  -4.75472   GTCAGATGAACAAAA                 CGGC GTG GCTG                 GACCGTAAAGCCGAA  66 480
A1D48_RS06025 NONE
A1D48_RS06020 1181037 .. 1181051 -  -3.6  -3.51032   AGTCGTTAATGAGAA               TGATAA TAA TTACCA               ATATCATTTGGAAAA  50 29
A1D48_RS06015 1179819 .. 1179850 -  -2.3  -2.97021   CGGTGAAAGATGAGA      TATGGCGAC-ACAC GCTGG GTTCAGCCGCCATA      TTGTCATTGCGCTGC  41 46
A1D48_RS06010 1176073 .. 1176095 - -13.5  -3.77831   GTATCAATAGCTAAA           GCGGCTGTT ACAGG AACAGCCGC           TTGCGGGCTTTCTTT 100 64
A1D48_RS06005 NONE
A1D48_RS06000 1173538 .. 1173553 -  -3.2  -4.87291   TACGGCAAGCAAAAA              CCGC GAACACAT GCGG               AGTCGCGTAGTGAAG  74 285
A1D48_RS05980 1168012 .. 1168035 -  -3.2  -3.40558   TACAGATTTCAAAGA          GATCC-GCT GAACGGT AGCAGGATC          TGCGCATCCGCGTAT  48 50
A1D48_RS05975 NONE
A1D48_RS05970 1166832 .. 1166860 - -13.3    -3.445   GGACTTATGAAAAAT        CTGGACGTAAAAA ACA TATTTACGTCCAG        GCTTTCTTTTTAGCA 100 35
A1D48_RS05950 NONE
A1D48_RS05945 NONE
A1D48_RS05940 NONE
        csiD NONE
        lhgO NONE
        gabD NONE
        gabT 1154407 .. 1154442 -  -9.2  -2.70932   CGCCTGGCTTAATTA    TTCGGCCTACAA TCGAAACGGTTT TTGTAGGCCGAA     TAAGACAGTTACGTC  66 66
        gabP 1152925 .. 1152946 - -10.1  -2.57931   TTTACTCCTGAGAAG           CTTCCCGGC TGAC GCCGGGAAT            AACTAACGTAGGTTT  70 28
        csiR 1151871 .. 1151882 -  -7.2  -4.93288   AACATTTAAATAAAA                CGGG AATA CCCG                 ACGCTGACAAAGTGA  91 373
A1D48_RS05890 NONE
A1D48_RS05885 NONE
A1D48_RS05880 1150156 .. 1150207 -  -4.3  -3.09135   ATAACCTTTAACAGA TGGCGCTGCGTTTCCTGTCTC TATTAACCGG GACTCAGGGAACGTTGCGCCA TGCTCATTCTGATAA  49 42
A1D48_RS05870 NONE
        alaE 1148352 .. 1148376 - -15.7  -4.35675   AAAAACCGACTAAAA          GCGCGACTGGC AAT GCCAGTCGCGA          CGTTAACTTACGCCT 100 33
A1D48_RS05855 NONE
A1D48_RS05845 1145569 .. 1145583 -  -2.8  -3.62597   GCCATCCGGCAACAA               TGCG TCACATT CGCA               TACCAATCGCCAGAC  50 15
A1D48_RS05840 1145331 .. 1145350 -  -6.3  -4.67635   TTTAAAATGAGAAAA            CGGCGCG ATGAAA CGCGTCG             GATTGTCGTGTGTTG  78 75
        nrdH NONE
        nrdI NONE
        nrdE NONE
        nrdF 1141421 .. 1141449 -    -9   -4.8269   GACAACCAGCAAAAA        TCCACCTGAATT GGAGG AATCCAGGTGAA        TAATGTCACTCGTAT  90 138
A1D48_RS05810 NONE
        proW NONE
        proX 1137831 .. 1137872 -  -6.6  -3.16971   TGAGGAGAGATTGAA TAGGCCGGATAGCGGCGCA TGAAC TGCGCTT-TATCCGGCATA AAAAACGATCTTATT  59 36
A1D48_RS05795 1136097 .. 1136111 -  -5.8  -4.29621   GACAAATAAAGTAAA               TGTATT ATT AATACA               AAATCATTCTTTCAG  67 448
        mprA 1135436 .. 1135459 -  -7.4  -3.85817   ACCTGTTGTCAGAAA          GGCCAGCA GTAACGCG TGCCGGCC           TGTCCGCTTTCCTGT  68 73
        emrA NONE
        emrB 1132624 .. 1132639 -    -9  -5.14563   TGGTCTACTAAAAAA              GGGATC CGCA GATCCC               TTTTATCAGATAGTT  93 39
A1D48_RS05690 1119943 .. 1119976 -  -6.7  -3.57144   CCGGCGAGCTGGAAA     CCTTCCTGCTCATGG CGCG CGATGAGCAAGACGA      TCCGCTCAATCTGAA  60 523
        srlA NONE
        srlE NONE
        srlB NONE
        srlD 1116405 .. 1116426 -    -3  -2.52896   CCATCCGGCAATTCA           CGGTCA GAACATCACT TGACCG            CCGGTTACGTTGATC  40 7
        gutM NONE
        srlR NONE
        gutQ 1113965 .. 1113976 -  -5.8  -3.68416   GCAAAATAATCATAA                CTGG GCGG CCAG                 CGCGCGGGCGCTGGA  60 92
        norV NONE
        norW 1109739 .. 1109751 -  -4.7  -3.30124   TCGTAGGCCGGATAA                GACGC GAA GCGGC                ACCATCCGGCATCAC  52 45
        hypA NONE
        hypB NONE
        hypC NONE
        hypD NONE
        hypE 1093842 .. 1093880 -  -8.8  -2.99325   GCCTGATAAGCAAAG   CGCCATCAGGCGTTAATG CAG CGTTAATGCCGGATGTCG   ACGCAAATGCGTCTT  66 72
        flhA 1091386 .. 1091426 -  -9.6  -4.72272   TTTGGCGAGGAAAAA  CCCGCCTGTAAGCAGTGC CCGGT GCACTGCTATCAGCCGGC  TAAACGCGAAGAGAT  95 229
        sitA NONE
        sitB NONE
        sitC NONE
        sitD 1087403 .. 1087415 -  -4.8   -4.2711   ACAAAAAGAATGAAA                CGCT TTATG AGCG                ATTCGATAACAATGC  66 221
        hilD 1078332 .. 1078364 - -11.3  -4.81163   TAAATATGAATAAAA      TGCCGGCCTTAATCC ACA GGGTTAAAGCCGGAA      GGAGATAGTGTCATC 100 295
        hilA NONE
        iagB 1075339 .. 1075372 - -12.7  -5.63504   AAGCTGATAAAAAAA     TAGCTTACTTTTAGA ACTA TCTGAAAGTAAGCTA      TTCCTGTCTCATTAT 100 37
        invH 1052398 .. 1052415 -    -7   -5.7946   TCGCCAATAAAAAAA             GCAGCA GCGAGG TGCTGC              TGTATCAAAAAGCAG 100 179
A1D48_RS05330 NONE
A1D48_RS05325 1051251 .. 1051267 -  -6.7  -3.63054   GAAAGGTAGATACAA              CAAATTA TTT TAATTTG              AAAAGCATATGAAAT  64 114
A1D48_RS05315 NONE
A1D48_RS05310 1049131 .. 1049159 -  -4.5  -3.62096   GTTCAGTAGTGGAAA        CAGCGATGTTCCG TCT CAAAACCTTGCTG        GGCGACCATCTGAGC  55 215
        pphB 1047927 .. 1047942 -  -3.2  -4.89519   AGAATACAAAATAAA              GTAACG CTAT CGTTGC               GTATATTATATAATT  72 52
        mutS 1042357 .. 1042374 -  -6.9  -3.34652   TGTCTAAACAATAGA             CAGGCGC TTCT GTGCCTG              AAAAAGGAAAGATCA  61 476
A1D48_RS05260 1040123 .. 1040138 -  -6.1   -3.2827   GTAGTTAAGGATTAA              GACGG TATTAT CCGTC               CGGGAGCGCAATGCT  59 51
A1D48_RS05225 1033065 .. 1033078 -  -9.5  -3.11459   AAGATGATGACGTAA               GCGGC TTGC GCCGC                TCCGCTATTTTTTGG  71 30
A1D48_RS05215 NONE
A1D48_RS05210 NONE
A1D48_RS05205 1030196 .. 1030215 - -13.6  -5.40072   CCCTTGTCAAAAAAA            GGCCAGTC TGTC GACTGGCC             TTTTTTTTACCGTTT 100 32
A1D48_RS05140 1018570 .. 1018585 -    -6  -3.86897   GCCAGCGGGGATAAA              CCGGGG TGTA CCACGG               CATGATGACGGCCAG  66 515
A1D48_RS05100 1007512 .. 1007525 -  -2.5  -3.72642   AATGAAGTAGTTAAA               TTTAA TTAA TTAAA                GGTATTCATGGAAAT  52 123
        sopD 1006240 .. 1006256 -  -9.4  -4.72272   TGCTGCTATGAAAAA              TCCGGC AGGCA GCCGGA              TTTTAAATTAGTTAT  91 55
A1D48_RS05085 1005242 .. 1005269 -  -4.8  -2.97725   GTATCAAGAAAATAT        CACCGAG-CCGGA TAT TCTGGCCTCGCTG        GATGAACTGATTGGG  46 102
        queD 1000803 .. 1000816 -  -2.3  -2.80252   ACTGTCAGAACATTA               CCGGT ATAA AGCGG                ATTTACGCGCTTGTC  39 301
A1D48_RS05035  990645 ..  990690 -  -5.4  -4.63932   TATTCCGCAATAAAA CTCAACAGGAATACCCTACC TAAAGC GGCAGGGTATTATCGTCGTG ACTCTGTTAACTGAA  74 41
A1D48_RS05030 NONE
A1D48_RS05025 NONE
A1D48_RS05020  986629 ..  986640 -  -5.8  -2.53382   ATCACTGGTAATCCA                CGAC TAAC GTCG                 CACTGGCGTTAAAAT  49 0
A1D48_RS05015 NONE
A1D48_RS05010 NONE
A1D48_RS05005 NONE
A1D48_RS05000  983353 ..  983384 - -11.1  -3.87815   CTTGATGTTTATAAA      GATATCTGGT-AGC TATCT GCTTACCAGATATC      TGGTATGGTTCCATG  86 63
        barA  976355 ..  976369 -  -8.5  -3.30124   TTGTAGGCCGGATAA               GGCGG TCACG CCGCC               ATCCGGCGAATATCA  69 38
        queF NONE
        ppnN  965417 ..  965443 - -13.7  -2.62425   AAGGAATGGGAGAAG         CGCCCGGCTGC TGGCG GCAACCGGGCA         TAAGCGCTAAGCGCA  86 32
A1D48_RS04910  963569 ..  963587 - -13.1  -3.61902   TTGTATCATAGAGAA             GCGCCGC GGTAA GCGGCGC             TAAAGGACTTAGCTG 100 34
A1D48_RS04905  962115 ..  962143 -  -7.5  -4.21974   CCATCAGGCAACAAA       GCCGGAT--GGCG GCGAG CGCCTTATCCGGC       CTACAGATCCTAAAA  74 52
         xni  961245 ..  961262 -  -5.5  -4.63932   CATCCGGCAACAAAA             CTACCGC GCCA GCCGTAG              CTGCTGTAAGTTTCC  74 8
        fucP NONE
        fucI  955577 ..  955591 -  -4.2  -3.94381   AGATAACTCCATAAA               CGCC GCCCGAT GGCG               CTACGCTTATCCGGC  57 96
        fucK NONE
        fucU  953687 ..  953705 - -13.1  -3.17212   CCATCATTCGATGAA             CGCCCGC GTCAT GCGGGCG             CACCGGCAAGAGATT  91 39
        fucR  952896 ..  952942 - -10.9  -4.88736   GACGAGCGATAAAAA CGCGCTGCCGTCATCCGGCGC GTCATCA GCGCCGGATGGC-GCA-CGCT TATCTGGCCTATGAC 100 34
        csdA NONE
        csdE  947737 ..  947761 -  -3.6  -3.15788   CCCCATAATATAAAT         GCCAGTACCAC AAAC ATGGTACCG-C          TACGCAGATATTTTT  46 317
        rarD  946499 ..  946510 -  -2.2  -2.79327   CGATCCGACGCAAAT                CCAG GTCG CTGA                 TTTGGCGAAAACCAT  39 381
A1D48_RS04810 NONE
A1D48_RS04805  944387 ..  944400 -  -8.1  -5.77988   ACAGATACAAAAAAA               CACCC GTAA GGGTG                TTCATTAAGTTGGTT 100 36
A1D48_RS04795  941382 ..  941395 -  -4.5  -3.32844   GGTCGTACCGGATAA               GACGA GTTC TCGCC                GGATGGCGACGCGTA  52 114
        mutH  921438 ..  921457 -  -9.2  -2.91199   GAAGCGGTAATTATA            GGCCCGTC GAGT GACGGGCG             AAAGCCCAGGCTGAA  67 149
A1D48_RS04720  920653 ..  920681 -  -9.6  -2.82263   AAGGAAATAAAGTGA       GTATTCGCTCCCC GGCG GGGGAGCGAG-AC        AGGATTACAGCGGAT  69 30
A1D48_RS04715  920272 ..  920296 -  -3.5  -3.30159   TGAAGGCTTGCAGAA          CGCTGACCT CGATCAC AGGCCACCG          CTTAACGTTCGATGA  48 27
A1D48_RS04710  918683 ..  918700 -  -5.5  -2.78596   GATCTTCTCATTACA             GCACGCA TTGC TGCCTGC              TTATGCCTTGTTGCT  47 392
        galR NONE
A1D48_RS04680  912936 ..  912948 -  -3.3  -3.11634   CGTCAGACCATTGAA                GAGCT GTT AGCGC                TGGAGATGCTCTGAA  45 49
A1D48_RS04670  910200 ..  910226 -  -7.3  -2.57211   AGGCGGGCGCAGAAG         GCATTGTGCTG TGTAC CAACACCATGC         ATAAAATCGCGCACG  54 446
A1D48_RS04630  903172 ..  903194 -  -3.4  -4.62708   AACACACAAAAAGAA           GCGCAATTTA CCA TAAATAGCGT           CAGTTGGGGGCGTTT  66 107
A1D48_RS04625  901872 ..  901895 - -12.5  -4.53303   GATTCTTATATAAAA          TAGCCGGGA GTTATA TCCCGGCTA           TCTTTTACTTTAGCC 100 35
A1D48_RS04615  900132 ..  900142 -  -2.4   -3.7104   ACCGATATTTAACAA                 TCCG AAG CGGT                 TGATGAACTATATGG  50 504
A1D48_RS04555  889811 ..  889841 -  -8.4  -3.30701   GGGGAGTAAACCGAA      GTGCTGAC-GGCGA ATTAA TCGCCAGTCAGC-C      AGTAAGTCTCTTGCC  69 286
A1D48_RS04535  888182 ..  888214 - -14.2  -3.82865   GAAATAAGATGTAAA     TTGCCGGATGG-GGC ATTA GCCGCCATCCGGCAT      CTCTTTGTTCAGGCG 100 60
        fldB  881381 ..  881413 - -12.8   -3.0752   GATATCAGGCCAACA     CT-GACGGAACGGCG TAAA CGCGGTTCCGTCGAG      AGGGAAATACAGCGA  83 49
        ygfZ  879441 ..  879478 -  -9.1  -2.81872   CCTACGAGAACAGCA   CGTGCGAGCCTGATGGCG TTG CGCTATCAGGCTATC-CG   GCTTTTAACGTGATA  66 41
A1D48_RS04465  876619 ..  876644 - -13.3  -2.73007   AAGACTCGTTCAAAG         TGTTACCCGCC GACT GGCGGGTAACG          TGCAGGAGTTAAAGC  85 34
        zapA  865309 ..  865330 -  -8.1  -3.28791   ATTCTGTTTTCACAA           TCACTTTAC CATA GTAAAGCGA            AAAGTGTTATTCAAA  65 32
        ssrS  865110 ..  865130 -  -3.9  -3.35679   TGTTGCCAGTCAGAA            GGGGAATCT CCG AGATGCCGC            CGCAGGCTGTAACCC  50 7
A1D48_RS04400  864305 ..  864324 - -10.7  -3.71649   CGCTGAAACGGGAAA            GCCCCTG GCGAAG CAGGGGC             TCTAAAAAGGAAAGG  85 196
A1D48_RS04385  860505 ..  860521 -  -7.9  -3.84246   GTGCGAATGATGAAA              GCCGCAG ATG CTGCGCC              AGTATCCGCGCAGGA  68 412
A1D48_RS04340 NONE
A1D48_RS04335 NONE
A1D48_RS04330 NONE
A1D48_RS04325 NONE
A1D48_RS04320  851024 ..  851043 -   -15  -4.42619   TAATACGGCATAAAA            CGGGTCGC TTCG GCGACCCG             TTTTTTATTCCCCCT 100 30
A1D48_RS04310  847945 ..  847956 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTCA CGCC                 GCCATCCGGCGCTGT  63 48
A1D48_RS04265  840147 ..  840174 -  -4.2  -4.58663   ATGAGCTGGTAAAAA        TCTTCCAACAGGA TGA TTC-GCTGGAAGA        TTTTGATGATTTTTT  71 364
        metK  834379 ..  834397 - -12.4  -4.08546   ATCAGCAATGATAAA             GGCCAGCA GGG CGCTGGCC             TTGATAAGTACGGTA 100 80
A1D48_RS04220  832530 ..  832556 -   -21  -5.08601   GGACTGCAAGAAAAA         CGCTTCCTCCTG TGG CAGGAGGAAGCG         TGGAGGGATTAGTCG 100 34
A1D48_RS04215  831969 ..  831989 -  -9.7  -3.72695   AGTCCGCTCAGGAAA            GTTCCCGGA CGT TTCGGGAAC            TACCCGGCGACCAGT  79 25
        endA  831122 ..  831138 -  -3.5  -4.11512   GCATAATAAAAAAAT              CCGCGTC ATG GCCCCGG              CGTTTGGCTATCCAG  57 74
        rsmE NONE
        gshB  829277 ..  829299 - -10.6  -3.51924   TTGTCACTCATATAA           GCCGTCTTTT GCC AAAGGACGGC           GGCCTTATCGGGCAA  81 138
A1D48_RS04195 NONE
        ruvX  828152 ..  828176 -  -2.2    -3.794   GTTGAAGGCATTAAA         CCA-GCTTATT GCCC AGTAAGCCTGG          CAACCGTGACCGCGT  51 66
A1D48_RS04175 NONE
A1D48_RS04170 NONE
A1D48_RS04165 NONE
A1D48_RS04160 NONE
        hemW  822954 ..  822978 -  -5.8  -3.73968   AAAGGGGTTATTAAA          TAATGCGC TTGCCGGCG GCGCATTA          ACCGCCACAGGTCGG  61 95
        mutY NONE
A1D48_RS04115 NONE
        mltC  815884 ..  815895 -  -5.8  -4.11751   ATGAATGTTTTAAAA                GGCA CATT TGCC                 GTTGTGATTTGGTGT  65 192
A1D48_RS04105  814525 ..  814576 - -18.3  -3.51708   TATGTTTTAAAGTAA CGTTGCCTGCAGGCCGGATAAGGCA TTTA CGCCTTATCCGGCCTGC-GA-AACA GGGCAAGAATTAATG 100 35
A1D48_RS04090  811157 ..  811178 -  -3.8  -2.71364   CTATCCGGGCAACGA           GGCGCATTA AACCG TAAT-CGCC           TCGCTTCGTCAACGA  45 104
A1D48_RS04085  810969 ..  810983 -  -4.2  -4.30844   AGTTGACCACCAAAA               GCCC CTGATTT GGGC               GGATAAATAGAAATT  64 118
A1D48_RS04080 NONE
A1D48_RS24480  810041 ..  810069 - -13.2  -4.82901   GTTCCCGGACAAAAA        CAGCATCCCACC ATTAA GGCGGAATGCTG        TGGATTTACTCTTAT 100 37
A1D48_RS04075  809391 ..  809404 -  -3.9   -4.4891   CTTACCATCAGAAAA               TTCAA TTTT TTGAA                TAAAGAAAAATTTTT  66 13
A1D48_RS04065 NONE
A1D48_RS04055  808368 ..  808387 -  -4.3   -2.8552   TTCGATTTACTAAAC            TGCGCCAG TAACT CTGG-GCA            TTCCCCTACACCTGA  48 44
A1D48_RS04045  807650 ..  807699 -  -7.2  -3.61603   ATGTACAAAAATAGA CTCTTAGTGAGTAGGCCGTAGGA TCTTT CCCTACAGCCT-CTCACAAACCG TACGTAAAGCTCTCA  67 211
A1D48_RS04040 NONE
A1D48_RS04035  806517 ..  806548 -  -6.4  -3.85698   GGCTGCGCTCAGAAA      CCCCGGTCACAGAG TTAT CTATGCTCCCGGGG       ATTTCTTCCCTTGCC  64 12
A1D48_RS04030 NONE
A1D48_RS04025  804947 ..  804961 -  -2.9  -4.85599   CTGACCTGATAAAAA               TGATA CATAT TATCA               AGTGGAACAGAAAAA  68 244
A1D48_RS04020  804294 ..  804312 -  -3.1  -3.31144   CCCGGACTTGGAGAA             GTCCTTT GGGCT AATGGAC             TGTTAAAGCTATTTT  48 237
A1D48_RS04010  803938 ..  803961 -  -2.6  -3.36166   TTTCTAAAAAACAAT          TAAAAATTAT TAAT ATAATTTTTT           TCTGTCGCGGTTGAC  46 129
A1D48_RS04005  803032 ..  803048 -  -7.2  -3.67402   ACAATGGGGAAAAGA              CCCGCA ATTGA CGCGGG              TGAAAAAGAACGCTT  67 41
A1D48_RS03980  797315 ..  797327 -  -7.7  -3.38088   AACGCAGCGAACGAA                CCTGA TAA TCAGG                CAGACAGTCCACCTT  65 79
        uxuA  790495 ..  790519 - -16.5  -3.62275   ATTGAGTAGGGGAAA          TCGCATGACGC GTC GCGCCATGCGA          AAGAAGGTTATTTGC 100 33
A1D48_RS03945 NONE
        uxaC  787210 ..  787220 -  -3.2  -4.10953   ATTTATTAAAGGAAA                 CCAC AGT GTGA                 AGTCATGAGTTATTA  57 325
        yghU  782503 ..  782535 -  -7.8  -2.76468   CAGCAGGGAATACCA     TGCCGGATGACGACA TTAC TACC-CCATCCGGCA      TTATGGTTTAACTTT  60 33
A1D48_RS03840 NONE
A1D48_RS03835  769303 ..  769320 -  -2.7  -2.91681   CTTTAAGCGTAGACA             CTTTTAC TACC GTAAGAG              GGAGAATCAGAACGA  42 89
A1D48_RS03830  768329 ..  768356 -    -7  -3.03124   TTTTATTGCCTAAGA        TGGCGC-CTTGCG TAA CAGAAGTGCGCCA        TCTTAATCGACTTCA  58 45
        metC  765607 ..  765635 -  -4.5  -4.20516   CCCGGACGCAACAAA        CGCAGACTTTTCC ACG GAAATTGTCTGCA        TATATGTCCATCCCC  64 48
A1D48_RS03805  764825 ..  764852 -  -5.6  -2.60392   CACGGGTCAACGAAG        CGTAACCGGGCCA TCC TGGCC-GATTATG        GATACGTCAGGCGTT  50 32
A1D48_RS03795 NONE
        dkgA  761566 ..  761585 -   -15  -5.15969   TCGGAATGCAAAAAA            GCCCGACG ACAT CGTCGGGC             ATGGCGTGCGATAAA 100 47
A1D48_RS03785 NONE
A1D48_RS03780  759052 ..  759066 -  -7.2  -2.73334   ATTAATTATATATTA               CCTTAA TGA TTAAGG               CATGATGCTTGTATA  58 415
A1D48_RS03765  755233 ..  755251 - -12.4  -3.56821   ATTACATCCTGTAAA             GGGCAGGA GAC CCCTGCCC             GGCAGATTTACATAT  93 33
A1D48_RS03760 NONE
A1D48_RS03755  753308 ..  753320 -  -3.3  -3.05844   CGTTCTATTTCAACA                GCCAG ACG CTGGA                AATGGCTGACCGCGG  43 122
        qseB NONE
        qseC  745031 ..  745044 -  -2.3  -3.33744   GTTTTTGGCAAAAAT               CTCTG CTAC CAGCG                TACTACGGCCTCAAA  45 17
A1D48_RS03715  744352 ..  744364 -  -4.1  -3.10894   AGGATGACCAGTTAA                GCAAA AAT TTCGC                TCAGATGCTTGCGAT  47 9
A1D48_RS03710  743939 ..  743983 -  -7.3  -2.64794   GCGAATCCGACATGA CGCCGCAGCCTGATGGCGACAC TTGC GCATCG-CATCAGG--GCGACG TCAGACGAGGGTAAT  57 44
        tolC  737729 ..  737786 - -15.7  -2.78384   CGCGGCTTTATGACA GGTAGCGCCGCGCTTACCAGACCTACA AGGG CATAGGTCTGATAAACGTAGCGCCAGC GAATAACTTATCAAT  93 36
A1D48_RS03670 NONE
A1D48_RS03665  735704 ..  735733 -  -8.5  -2.71681   TAAGGCGCTGAATGA       TTGCCCGATG-GCG CTA CGCGCATCGGGCTT       ACAGGAGAATCTATC  64 36
        zupT  733719 ..  733732 -  -2.5  -3.61178   TTTAGTGATGTTAAA               TTTTA AGGG TAAAA                AGGATGTTTATTGCC  50 272
A1D48_RS03645 NONE
A1D48_RS03640 NONE
        dsbI  730112 ..  730137 - -15.5   -4.3898   ATTATTGTGAGAAAA         GCAGAGGCCTG AATG CAGACCTCTGC          TTTGGTTTATCTATT 100 45
A1D48_RS03625  728574 ..  728591 -  -8.3  -2.64243   TCAGATCTTATATGA             GCGGGCC GTCA GGCCCGT              TCACGTTTTTACTCT  63 34
A1D48_RS03615  727444 ..  727456 -  -3.4  -3.90112   TTCCTCTCAATTAAA                CGTA GAAGG TACG                CTCAGCCAAATAGCG  55 8
A1D48_RS03610  725700 ..  725721 - -13.7   -5.9667   AAAAAGATAAAAAAA           TCCCCGGCC TTAT GGCCAGGGA            CAGGAGATATAGCGG 100 45
A1D48_RS03605  725406 ..  725428 -  -9.1  -3.94051   AAAGTAAAGGAATAA           GGGTGAGAG GGGAT CTCTCCCCC           CTCTGATTGGCTGTT  79 39
A1D48_RS03580 NONE
A1D48_RS03575  717340 ..  717383 -  -6.6  -3.28712   TTGTCGGTCTGATAA GCGCAGCGCCATCAGGCA ATTTATCG TGCCGGATGGCGTTTAGC TGGCGGGGTTCGGGC  61 21
        plsY  715041 ..  715063 - -11.2   -4.7416   GTAAAAGCGGAAAAA           GGGGGCGACA TCA TGCCGCCCCA           ACGGGTTTACAGCAA 100 241
        rpsU  713497 ..  713523 - -10.9  -4.40882   CATAAACGAAAACAA        GCCGCGCATTCC TTTC GGAA-GCACGGC         CTTACAACTACAACT  90 75
        dnaG NONE
        rpoD  709558 ..  709575 - -14.1    -5.626   GACCGGATAAAAAAA             CGCCGCC TTGC GGCGGCG              TTTATACGTATGCGG 100 45
A1D48_RS03525  708735 ..  708752 -  -6.3  -3.57119   TAGAGATTCTTTAAA             TTCGCGA TTCC TCGCAAA              TCCTTGATATTTGGT  62 37
A1D48_RS03470  699225 ..  699249 - -12.9  -4.12296   GCGAGAAGTAAACAA          CAGGCCTGG ACTAGTG CCAGGCCTG          TAATCAGTCAGAAGT 100 33
A1D48_RS03430 NONE
A1D48_RS03425  694234 ..  694253 -  -6.3  -4.83243   GGCACATAAAACAAA            GGCGGCC ATGCCG GGCCGCT             ATTTATCTAAGATGT  80 51
A1D48_RS03400  689840 ..  689898 -  -5.3   -4.2349   GCGTTACATTTAAAA GAGCTGG-TTAA-CGTGTTCCGCGTCCGC GAA GAGGACACGCAGCCCGCTTAATCCAGTTC GGCGATTTCCAGCGC  65 14
        ygjG  684574 ..  684599 -  -8.3  -2.78211   ACCCGGGGAAAACAG         GCCGGATAAGCA CAG CGCC-ATCCGGC         ATCGTTTTTAAACCT  64 33
A1D48_RS03375  682338 ..  682388 - -13.5  -3.29144   GGACGCCGTCGATAA GGCGCTCAAG-CGTCATACCGGCCT ATA AAACCGGTATGACGGCGTAAGC-CC GATAAGCGCAGCGCC 100 55
A1D48_RS03365  680516 ..  680531 -  -3.2  -2.88427   AATACCCTCTACAGA              TCGTCA TCCT TGACGT               GGCGGCAGGCAATGA  44 112
A1D48_RS03360 NONE
A1D48_RS03355  678442 ..  678467 - -15.5  -6.11644   CTATGCAAAAAAAAA         CGGCTAACGCC GAAT GGCATTAGCCG          CTGCTTTTATGCATA 100 245
A1D48_RS03350  677389 ..  677415 -   -13  -5.28942   CATGTTAAACAAAAA         CGCCCGACAG GTGTGCG CTGCCGGGCG         TTTTTGACGGGGCTG 100 59
        sstT  675962 ..  675974 -  -6.2  -3.08133   CACTTAGCTACGCAA                GGCG TTATT CGCC                AGACGTTCGTCCTCT  56 1
A1D48_RS03335 NONE
        mzrA  674414 ..  674425 -  -4.4  -4.16371   CATTAAACAATGAAA                TCAC CAAA GTGA                 GTGATATGATTCGGA  64 51
A1D48_RS03325 NONE
A1D48_RS03320  673592 ..  673604 -  -4.1  -2.57683   AGAGTCCGCCATAAT                TAACG ACG CGTCA                GCAGTACGCCCAACA  44 12
A1D48_RS03315 NONE
A1D48_RS03310  672830 ..  672877 - -13.7  -4.45485   ACGATATGCATAAAA GTATCGCGCCACCAGGTGTAATC GGGC GAT-A-ACCTGATGGCGCGATGC TATAAAAGAAAAGAT 100 42
A1D48_RS03305  672211 ..  672230 -  -6.4  -4.50976   CTTCAGATGACAAAA            GCGAGG CGCTATTC CCTCGC             TTTTTTAATTGAGTA  76 49
A1D48_RS03300  671177 ..  671194 -  -9.1  -3.73647   GGTATTTATTAATAA             GGCATCC CGGA GGACGCC              TGAAATTAGCCAAAG  77 31
A1D48_RS03295  670694 ..  670708 - -12.8  -4.07568   CGCGGCGCTTTAAAA               GCGGCG CCG CGCCGC               CATCAGGAAAAACGT 100 28
A1D48_RS03285  668975 ..  668990 -  -5.4  -2.78384   TTCTGGCTGACTACA              CCGGTA AATC TACCAG               TAATGCGCGCAGCGG  50 5
A1D48_RS03280  668676 ..  668698 -    -9  -3.99374   GCGCATTAATAATAA           CGCCCCGGCA TGT CGTCGGGGCA           GCGTGTTGCCCGATG  79 109
        garD  650329 ..  650347 -  -5.3  -5.66684   TAAGGCATAAAAAAA             GCATGTC GGGCA GACATAC             TTCAGGCTACAGACT 100 130
A1D48_RS03190 NONE
        gatZ NONE
        gatA  647475 ..  647493 -  -2.3  -3.80461   CAATTTATTATCAAA             CCTGGAC GCACT GCTCAGG             CTCAAGGATGGTTTC  51 2
        gatB NONE
A1D48_RS03170  645750 ..  645777 -    -4  -3.15427   AACATTCTCCAGGAA        GGTGAGGGGAGC GATT GCTCCCCTAAAA         TTAAGAGGCGATTTG  48 26
        gatD  644659 ..  644687 -  -4.5  -4.06903   AATTTCGAAAGGAAA        TGTGAGCCAGC GCAGGTT GCTGGCTCGTA        CCATCAGGAAAGTTG  61 29
A1D48_RS03160  643591 ..  643603 -  -6.3  -3.96148   CGCTGGCAGCAGAAA                TTCAC GGC GTGAA                GAAAAATGCGCTGTA  65 229
A1D48_RS03150 NONE
A1D48_RS03145 NONE
        diaA  639722 ..  639733 -  -4.4  -2.71731   TGTACTCCTTAATCA                TCCT GGTG AGGA                 AAAAGCGTGTTATCG  47 7
        yraP NONE
        yhbO  637398 ..  637414 -  -2.1  -3.90744   TGGCTGGCGAAACAA              CACGTGG TGA CCTGGTG              CGTACACCATGAGGG  52 390
A1D48_RS03115  636863 ..  636873 -  -2.4  -2.87211   ACCCGGCGTTATATA                 GCCG CTT CGGT                 TTTGAACTGGCCGCG  40 153
A1D48_RS03100 NONE
A1D48_RS03095  633817 ..  633842 - -14.1  -3.24926   GACGGCAAAAACAAT         GCCCGAT-AGCG CTG CGCTTATCGGGC         CTACGGGAGCGCTAT  95 77
A1D48_RS03090  632347 ..  632357 -  -2.4  -4.07568   TGGGGCGTTTTAAAA                 CGGC GCT GCTG                 ACGTTTGTGCCGCCA  56 377
        argG  617102 ..  617117 - -11.8  -5.24531   ATGTTCCACAAAAAA              GGCCGC TTTC GCGGCC               TGTTGCATCAACGAC 100 47
        yhbY  609531 ..  609545 - -12.8  -5.13137   TAAAGAAAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACGGAGA 100 118
        dacB  607242 ..  607261 - -16.4  -3.41587   GCCTATAAAAGCCAA            CGGGCCGC ATTT GCGGCCCG             TTTTATTATGTTCTT 100 89
        ispB  603101 ..  603116 -  -6.1  -2.79023   GAACGGCATTAACGA              TCGCG CTGCAC CGCGA               TGTGTGCGAGACCGA  53 3
        sfsB  602536 ..  602559 -  -9.6  -3.63515   CTGTACGCTTAATAA          CCCCCGCGAAC GCG ATT-GCGGGGG          TTATTTTACAGGCAC  77 41
A1D48_RS02905 NONE
        kdsD  595471 ..  595486 -  -4.6  -2.62616   TGAGTTTCTACACGA              CGCCTG CACG CAGGAG               ATCATGCATATGTAA  46 2
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB NONE
        rpoN NONE
A1D48_RS02870  591204 ..  591230 -   -13  -3.92522   CGCTAACTGTACAAA         TGGCCCGTTGTG TCA CACAACAGGCCG         TCCTGCACTGGCTAA 100 53
        ptsN NONE
        rapZ NONE
         npr  589249 ..  589262 -  -2.5  -4.58283   CAAGTCCTGGAAAAA               TTTAT TCAC ATAAA                TTTAGTATGGACAAA  63 243
        yrbL  588419 ..  588430 -  -7.2  -3.32844   TCCGTTACGCTATAA                GGCG AATG CGCC                 TTCCGGCTATGTGCG  61 194
        gltB NONE
A1D48_RS02805  576984 ..  576995 -  -7.2  -3.23979   AGCACAAGGCATCAA                CCGG GGAG CCGG                 AAGGGTTACACTTCG  62 31
A1D48_RS02800  575636 ..  575651 -  -3.2   -3.1811   GTTCTCAGAATAAAG              CAAACG TTTT CGTATG               ATATTTTTTTGATAA  46 64
        codB NONE
A1D48_RS02790  572602 ..  572613 -  -7.2  -3.96327   AGGCCGCAGGAGAAA                GCGC CGGG GCGC                 TATGAATTGCAGGGC  71 466
A1D48_RS02725  562109 ..  562127 - -11.7  -3.13082   GGAAAGATAGAGAGA             GGGCGCA AGCGA TGCGCCC             GATAATTTTCTTAAC  83 50
        degQ  560586 ..  560615 -  -7.9  -3.11192   CATACCATGAGTTAA       CCGGACATCA-CAT CGC AGGCTGATGCCCGG       TTTAAGACAGGATTA  62 38
A1D48_RS02715  559232 ..  559249 -    -7  -4.07568   TGGTCGCCTGGAAAA             GCGCAT CGCAGT ATGCGC              GTCAACAGGCGCAAC  70 241
        argR  548897 ..  548923 -   -13  -4.09649   GAGAGGACAAAAAGA         TGCCTCCGCCGT ACG ACGACGGAGGAA         GTGGGACTAAAGCTC 100 32
        yhcN NONE
        yhcN  547886 ..  547904 - -13.1  -5.47914   AAAAAGCATAAAAAA             GCCCCCG ACAGG CGGGGGC             AAGTCGTCGGGTTAG 100 52
        aaeR  543079 ..  543133 -  -8.1  -3.32844   GGCGGCACCGCATAA CTGTCCGC-CTTATCAGGCCTGTGGTG TGTGC CGCC-CAGGCCTGATAAGCGCAG-C-G CCATCAGGAAATGTC  65 92
A1D48_RS02570  529333 ..  529381 -  -7.6  -2.94099   CTTTTTCATCACAGA CTCCCGGTC-TACCCACCACAACA TGG CGT-GTAGTGAATATGACAGGGAG TGTGTCAATGTGTAA  59 83
        msrP NONE
        msrQ  527571 ..  527583 -  -3.3   -4.4078   TTCTGCGAACGAAAA                TCGCC GTT GGGGA                ATGTAAAGTCGCACA  64 164
        accB  526848 ..  526875 -  -2.7  -3.09803   CAATTTTATCCAACA        TGTTCGCC-TCG TTACT CGATGACGACCA        GTGGCTCGTCAAATT  43 9
        accC  525463 ..  525479 - -10.8  -5.72622   CCCAGAAATAAAAAA              GGCCGG ATTCA CCGGCC              TTTTGAGACTAACGT 100 45
A1D48_RS02545 NONE
        panF NONE
        prmA  522785 ..  522804 - -11.4  -4.36914   GTTGTGTGGAGAAAA            GCGTGGCC GGGC GACCACGC             TGACAAGAATTATTT  93 35
        dusB NONE
         fis  520810 ..  520835 -  -8.2    -5.252   GATGCGTATAAAAAA         GGCGCTTCCC CATGCC GAGTAGCGCC          TTTTTAAACAAGCAG  91 55
        yhdJ NONE
A1D48_RS02510 NONE
A1D48_RS02505  517378 ..  517394 -  -5.1  -3.89756   ATGCCAAATGAACAA              CAGGC GGAAGAA GCCTG              AGATTATTTTGAGTT  61 29
A1D48_RS02495 NONE
A1D48_RS02490  512009 ..  512024 - -10.4  -4.58395   CGTACCGTTTAAAAA              GGCGTC CGAA GACGCC               TCTGTTTACCGGTTA  89 38
A1D48_RS02485  511553 ..  511569 - -15.1   -3.6959   ATATTATTACTGAAA              GCGCGGC ATT GCCGCGC              CTGCATGTATCATTT 100 35
A1D48_RS02445  504347 ..  504362 -  -4.7  -3.27476   AGGCTGAAGCATTAA              TCCTG GCCCAG CAGGA               AGACGATCACGGTTG  49 32
A1D48_RS02410 NONE
A1D48_RS02405  498962 ..  498980 - -10.2  -5.54907   TGTATAAAATAAAAA             TGCCCGGT AAC ACCGGGCT             TATAAAGACGTGACC 100 42
        rsmB NONE
        trkA  496233 ..  496251 - -11.7  -4.90917   AAAGGGAATTAAAAA             GGGCGCT GAATG AGCGCCC             CTTAAATTAGAGGAA 100 32
        mscL  495647 ..  495698 - -10.3  -3.09933   CGGTAATCGAGGGAA CTGGGAGGCCAGTGGCAAGAAAGT AAGTG ACTTTTTTACCACTGGCCTT-CTG CTTATTAAGAACGGT  73 30
        hopD  479940 ..  479954 -  -2.8  -2.52516   TTGCCGACGAGGAAG               GCCA CATCGAC TGGC               TGGAAACTGAGCTGG  40 99
A1D48_RS02155  471251 ..  471265 -  -8.5  -5.60993   TCGGGCACAAAAAAA               GCGGG TTAAC CCCGC               TTTTTTTTCGTCTCA 100 38
A1D48_RS02125 NONE
A1D48_RS02120  465257 ..  465268 -  -5.8  -4.95896   AGAAAGCGAGAAAAA                CCAG CAAG CTGG                 CGGCATTTACTTGTT  83 184
A1D48_RS02105 NONE
A1D48_RS02100 NONE
A1D48_RS02095  462443 ..  462453 -  -2.4  -3.02144   TGAGCGCCGGGAAGA                 CGCG CCG CGCC                 TGTTTACGCACATTA  42 285
         crp  461240 ..  461261 -    -8  -5.30616   CGATGCAAACAAAAA           TGGCGCAT GATAAA ACGCGCCA            TTCTGACGGGATTAA  91 37
A1D48_RS02080  459058 ..  459068 -  -8.2   -2.6193   CAATGAAGGAATGCA                 GCGC TTT GCGC                 AGGCGGTAGGGAAGG  56 94
        tsgA  454262 ..  454291 - -13.5  -2.88861   CAGGAGGGGGATAGA       GTGCCGGAGGGCG ACGT CGCCATCCGGCAA        GGATTATCAATGCGT  87 32
A1D48_RS02045 NONE
        nirD  451142 ..  451162 - -12.5  -5.72118   AAAAAATACAAAAAA            GGGGAGGCG TTG CGCCTCCCA            AAAATAATTAACCGC 100 33
        nirC NONE
        cobA  448680 ..  448704 -   -13  -4.12188   CGAGTAGTTGTAAAA          TAAAGCCCTG TTATT CAGGGCTTTA          TTTTAATTAATAATT 100 32
A1D48_RS02025  442402 ..  442423 - -14.5  -4.69664   GATATGATTTAAAAA           GGCCGCTTA ATAA TAAGCGGCC            TTTATTAGTGTTATA 100 54
A1D48_RS02020  442046 ..  442060 - -11.4  -5.42862   AGACCTGTAAAAAAA               CCGGGA AAA TCCCGG               TTTTTTTGTATCTGC 100 54
        mrcA  428964 ..  428977 -  -9.5  -4.58859   AAACACAATAAGAAA               GGCGC CGGA GCGCC                TTTTTTGATCAGAAC  89 34
        igaA  425830 ..  425864 -  -9.2  -3.18274   TCCAGGGTAACGCAA     TTTGCGCGACAGGGTA GCA TACCCTGTCGCACGGC     GGCGCTATCAGATGA  70 33
A1D48_RS01935 NONE
        hslR NONE
A1D48_RS01925  423739 ..  423786 - -11.5  -3.86346   GGATGGCGGCATAAA TGC-CTTATCCGGCCTACGG AGCGGGATG CTGTAGGCCAGATAAGCGCA GCGCCATCAGGCAAT  91 63
        pckA  419931 ..  419956 - -13.4   -3.4799   ACAAAAGAGGCATAA         GAAAGGGAGG TATTAT CCTCCCTTTC          TTCTTAACGCTGGAT 100 74
        greB  417128 ..  417142 -  -3.4  -2.60032   TGGCTGGCAAAAATG               CCAGCC ATC AGCGGG               GGCTTAGGATTCTTC  42 46
A1D48_RS01895  414691 ..  414724 - -13.1  -4.14739   GGACGTATTGCAAAA     TCGCAGGCCGGATAA GAAG TAACCCGGCCTGCGT      ATTACCCAATTAGCG 100 35
        feoA  414076 ..  414088 -  -4.1  -3.14602   CTCACTGTATTAACA                GGAAA CCG CTTCC                ACTTCTATTAACGCC  48 7
        feoB NONE
        feoC  411400 ..  411429 - -15.1  -4.21462   AGGCATGACGCAAAA       TTGCCCGGCA-GCG TGA CGCGTACCGGGCAA       CATAACGCGGGATAA 100 80
A1D48_RS01870  410016 ..  410039 -    -6  -4.62069   CCCGCACCTTAAAAA          GCGTAGTGCTG GCG CAGC-CTATGC          CGGATGTAGACGTGC  75 321
        gntX NONE
A1D48_RS01855  408129 ..  408155 - -12.3  -2.68823   GGTGGGGCAGACAAG        GCCCGACAGGCG CAAG CGCC-ATCGGGC         ATGGATGCGGGGAAA  81 44
        gntT  406363 ..  406388 - -17.7  -3.62255   GCGAAGAAGAAGTAA         TAAAGCCGGGG ATTT CCCCGGCTTTA          TGATGGTGAGAGCAC 100 118
        malT  398252 ..  398266 -  -7.8  -3.27475   TTTGGGATCATAAGA               CCTCGC TGA GCGAGA               ATTTCCTGGTCACAA  59 340
A1D48_RS01810  391626 ..  391646 -  -2.6  -3.60971   ACGCTAATGGCGAAA            GAGGAT TTTCGTATT ATCCTC            GCCGGCGGCGAACTC  47 364
A1D48_RS01790  388170 ..  388187 - -12.7  -4.08767   GGTATGTGGCGAAAA             GGGCGGT ATAA ACCGCCC              CGGATTTTATTACGA 100 35
A1D48_RS01770 NONE
A1D48_RS01765  381419 ..  381440 -  -9.3  -4.11692   TATTGATCCTTAAAA           CAGGCGAGC CGTA GCCCGCCAG            GGATATTATTTAAGC  80 31
A1D48_RS01760  380462 ..  380491 -  -8.6  -5.27335   GTGCTGAAATAAAAA       GAC-ATAGCGGGC AAGAA GCCCGCTTTCGTC       ATCGCTTAAAGTCCC  95 31
A1D48_RS01685  361969 ..  361980 -  -2.2  -2.84126   TGATAAAGCTTAAAG                TGGC AATA ACCA                 TGAAATTCAGATGGT  41 132
A1D48_RS01680 NONE
A1D48_RS01675  359803 ..  359822 - -10.8  -4.41548   TTATATTTTATAAAA            GGAGTAAC TTTC GTTACTCC             ATTGTTTTTTATTTT  90 34
A1D48_RS01670 NONE
A1D48_RS01665  357568 ..  357579 -  -7.2  -4.37092   ACTGCGGGTAGAAAA                GGGC TTCA GCCC                 CGATACGCTAAAGTT  77 221
A1D48_RS01655  355343 ..  355376 - -13.1  -2.72991   GTATACCGTCAATCA     GCCCCAGCGGA-CGGC AGA GCTGCTGCGCTGGGGC     GTGGATTGTATCTGC  76 95
        panM NONE
A1D48_RS01590  343999 ..  344030 - -10.8  -3.06796   GGCTACGTTATTCAA      CCCCGGTCACTTAC TTAT GTAAGCTCCCGGGG       ATTTCATAACTTGCC  76 29
        rsmD NONE
A1D48_RS01555  336947 ..  336963 -  -6.5  -4.58283   CAACGGCGGGAAAAA              GCCGC TAATGAG GCGGC              GCCGTTACAGCAAAA  78 312
A1D48_RS01545  336055 ..  336074 - -12.2  -2.95223   TAACCGGAGGATACA            CTCTGGAG TCGA CTCCAGAG             TCAAGCGCTATTATT  80 40
        zntA  333780 ..  333799 - -12.8  -3.30007   AATACCGCGGGATAA            CCCGGCGA CATG CCGCCGGG             TGGGAGAAGATTAGT  90 36
A1D48_RS01535  331774 ..  331797 -  -6.7  -2.73542   CTGAACCGGTAATGA          TGGTGCGCA AAACGG TGCGCAACA           TGCAAACTGGCGAAA  52 198
A1D48_RS01525 NONE
A1D48_RS01520  330191 ..  330218 - -14.1  -5.40072   TGGCGCTTAAAAAAA        CGGCCTCCGTC TGCACT GCCGGAGGCCG         CATCATCATCGTAAA 100 43
A1D48_RS01510  327773 ..  327788 -  -3.2  -2.82623   CTTTTCCCAGAACGA              CCTGGT ACAT ATCAGG               ACCAACGTTGCCTAT  43 71
        acpT NONE
        nikR  326686 ..  326703 -  -6.9  -3.17075   GGCCGGGCAAGCGAA             GCGCCCC CGGC AAGGCGC              TGGGGCGTTAGTCTT  59 33
A1D48_RS01445 NONE
A1D48_RS01440  312442 ..  312479 -  -4.7  -4.16605   GATAAAAAAAATTAA   TCCGGCAGACGGGGCCGC GTC GCGGTCCCGT-TATCAGT   CCAGGTATCGTTCGT  64 21
        silR NONE
        silS NONE
        silE  299661 ..  299678 - -12.7  -4.88388   AGAATCTGATAAAAA             TGCCCCC TGTA GGGGGCA              AAGATGTTGCCATAT 100 100
A1D48_RS01385  299159 ..  299174 -  -6.1  -4.79826   ACAGAGTAGTAAAAA              CCCGA AATTAA TCGGG               TTTGAATTATATAAA  80 106
        pitA  285886 ..  285907 - -13.7  -5.28481   CACTGAATGAAAAAA           GCGGGCCAG TTTC CTGACCCGC            TCGTGTTAGATAAGC 100 155
        uspA  284606 ..  284623 - -10.5  -4.99043   GGGGGATAAACAAAA             CGCCCAC ATAA GCGGGCG              TTGTTGTTGATAGCC  93 121
        dtpB  282726 ..  282764 -  -3.8  -3.53012   CGCGTGGTGGTCAAA  CGTCCCGATTATGCGCC GCCGCT GGCGGATG-TCGCGACG   CCCAACGCCATCGTC  51 183
A1D48_RS01305  278477 ..  278492 -  -3.2  -2.50514   AGGAAAAACAAGTAG              GCTGTG GCGT CAGAGC               GTAAATAACGTCAAC  42 19
A1D48_RS01300 NONE
        gorA  275562 ..  275574 -  -3.4  -3.85698   TTTTTTGGTGATAAA                TTCG GCTGG CGAA                AAACAATCATGTGGG  54 517
A1D48_RS01280 NONE
A1D48_RS01275  271595 ..  271631 -   -16  -2.57136   GTATTAATCATGAAG   GCT-TGTGCGCCCACCC TCGA AGATGGGCGCACAGAGC    GATGAATGCAGGTCG 100 69
        treF  264301 ..  264322 -  -5.9  -5.60689   GCAGACAATAAAAAA           TGGCTGA AAATTCAG TCAGCCA            TTTATGATGCGATTC  93 58
A1D48_RS01235  261638 ..  261652 -  -4.2  -4.64992   GGCAAAAAATAGAAA               GCGC GCCGGAT GCGC               TGGTCATGCTGGATA  71 489
A1D48_RS01225  259974 ..  259992 -  -2.2  -3.06515   GTGGATGCTGAAAAT             GCGGCTAC TCT GCGGCCTC             TTTAATGGTTTCCGT  42 11
        yhjD  258841 ..  258854 -  -3.1  -2.72661   CAGTAGGCCGAATGA               CGACGC CGT GCGT-G               CCATTCGGCAGCAAG  43 48
A1D48_RS01215  257176 ..  257199 - -18.2  -2.66326   GTAACGTGAAACGTA          GCGCCGGATG ATGC CATCCGGCGC           CCTATTACAACGCCT 100 30
A1D48_RS01200  253016 ..  253045 - -10.7  -3.25823   CCGGCGGCACAGTAA       GCTGCCGCCTGCCG GCC CGGTAAGCG-CAGC       GCCACCGGGCAAGAG  78 49
        bcsE NONE
        bcsF NONE
        bcsG  233183 ..  233225 - -12.7  -4.60797   GCTGGATAGAGAAAA CCCCCG-CACGTTGACTGGT ATAA ACCTGGCAACCTGACGGGGG CTAACTTGAACCTCA 100 279
A1D48_RS01120  231227 ..  231243 -  -4.3  -4.32034   CGATCAGGATGAAAA              TCCGCAG AAC CCGCTGA              GTTAATTGCGTTTTA  66 131
A1D48_RS01080  221180 ..  221198 - -14.6  -4.03204   GACCAAATTCAGAAA             CCCTGCTC AAC GAGCAGGG             TTTTTTTGTATCTGA 100 156
         tag NONE
A1D48_RS01025 NONE
A1D48_RS01015  207916 ..  207938 -  -6.9  -4.54727   CTCCGTAAATCAAAA           GGTAAGCGC GGCAT GCGCCAACC           GGAACAGGCTTATTA  77 211
        ghrB  206874 ..  206914 -  -7.8  -2.79098   GCGACTCAGTAATGA CAGTCTGCCCGATAAGCGC AAGCCA GCGCTTATCGGGC---CTG TAGCGTTATCCCGCC  60 31
A1D48_RS01000  205390 ..  205408 - -10.3  -4.07687   ATCGGGCGGGGAAAA             CGGTCCT TACGC AGGACCG             TTAAAACAGAAAGGG  82 48
        cspA  204887 ..  204906 - -11.4  -5.80364   ATTGGAATAAAAAAA            TCCCCGCC ATCA GGCAGGGA             TTCAAAATTCTGAGC 100 50
A1D48_RS00990  204033 ..  204055 -    -7  -5.72622   GCCAGAAACAAAAAA           GAGCCCATGT ATT AAATGGACTC           TTTCGCTGATGCCTC 100 189
A1D48_RS00970  200916 ..  200939 -  -4.6  -4.05033   CGTATTCCATACAAA          TACCCACATA AAAT TAAATGGGTA           TTTTATGCTCAACCC  61 203
A1D48_RS00965  199893 ..  199905 -  -6.9  -3.28001   TAGCCTTAAATTTAA                CGGAC TCA GCCCG                GTTGAATAGCGCCTA  61 260
A1D48_RS00935  194638 ..  194655 -  -9.9  -3.22774   TACAGTGATGATGAA             TGATGGC CGGA GCCATCA              TTCGTTTAGCTAACC  72 31
A1D48_RS00910  189334 ..  189360 -  -2.4  -3.99374   GCGTAGTAACAATAA        CCTGTTCG-GCA TGAAG TGCACGAA-AGG        GCGTTGTACCAATAC  54 360
A1D48_RS00900  186347 ..  186359 -  -3.3   -3.9398   CCATAACGCTACAAA                TGGCG GGG CGCAA                ATGGGGGTCAGGCGG  55 133
        avtA  184627 ..  184645 -  -2.3   -3.3375   AGGAACAGCAGAATA            GCGCGGCG GTGA CGACG-GC             GGACTTTGTGCCGCG  45 423
A1D48_RS00880 NONE
A1D48_RS00875  181920 ..  181930 -  -2.4   -4.4009   CTCTATTTTATAAAA                 CGTC TAT GGCG                 ACTTTTACGACTATT  59 7
A1D48_RS00870 NONE
        yiaM  180332 ..  180361 -    -2  -2.92896   AGCAGAGAAATATCA       CCACGGCCATGA TTAGGC TCCTTGCTGTGG        TTGTTGAAAGGAATC  41 8
        yiaN NONE
A1D48_RS00855 NONE
A1D48_RS00850 NONE
        ulaD NONE
A1D48_RS00840 NONE
        araD  174200 ..  174213 -  -3.9  -4.01419   TATGAATTAAGGAAA               TTCTT ATTC AAGAA                ATTATTGAAAAAGAT  59 177
A1D48_RS00830  172609 ..  172631 -  -7.7  -2.74192   GATGCTGGAACACTA           CCAGCAAAC CAAGT GCCTGCTGG           TGAGCTATTCCGATA  55 96
A1D48_RS00820  169606 ..  169627 -  -7.3  -4.13945   ACTGCGATCGTAAAA           GATCGGTAC TATC GTAACGATC            GGATAGTCGCTTTCG  74 476
A1D48_RS00800  163337 ..  163357 -    -9  -3.17075   TTCCCCTCAACCTAA            CCCTCTCC ACAAG GGAGAGGA            TATCGCCTTCATATT  70 161
        mtlD NONE
A1D48_RS00790  161142 ..  161152 -  -5.4  -2.76263   CTCATTATTTAATTA                 TCTC GTT GAGA                 ATAAAATCCTTTTTG  50 400
A1D48_RS00780  160521 ..  160531 -  -3.2  -4.59773   TTTCATCTTGAAAAA                 GCAG GGA CTAC                 CGTTAAAAATGAACT  66 149
A1D48_RS00775 NONE
        sadA  154971 ..  154993 - -16.4  -4.30448   AAAGGGAAGTGAAAA           GGCAATGGCA TTA TGCCATTGCC           TTTGATGTCGGGAGT 100 53
        lldP  153070 ..  153081 -  -2.2  -2.86271   TTGGCATCACAATCA                CGGA ATCA TCCA                 GGTTAAAACATAGGC  41 11
        lldR NONE
        lldD  151084 ..  151103 -  -4.8  -2.73268   AATAGCAGAAATTTA            CCGGGCTC TCAC GCGCCAGG             CGTTCAGGCGGCATC  49 29
        trmL  150388 ..  150406 -  -5.9  -2.88579   GTAAGCGTTGACAGA             CGCGCCA TTGGC CAGCGCG             CCGCTACGCTGTTGG  51 188
A1D48_RS00735  147956 ..  147974 - -11.7   -3.1352   CTGTAAGGTAAGAGA             GGCGGGA CGGAT TCCCGCC             AGTCGGGTTAAGGGC  83 33
A1D48_RS00730  146538 ..  146571 -  -8.3  -5.32944   GGTACAACTAAAAAA    CGCTGTTCCGATGGA GTGCAA TCC--CGGAACAGCG     GAGCGAAGAATTCGC 100 52
        gpmM NONE
        envC NONE
A1D48_RS00690  139179 ..  139194 -  -4.6  -3.57144   GTCCGCAGCGCGAAA              GCGGCT TATC AGACGC               TGCTCTGGTCTTTCC  52 98
        rfaD NONE
        rfaF NONE
        rfaC NONE
        rfaL  131295 ..  131324 - -14.4  -4.21194   CCGGACGATGGAAAA       CGCGCTGATACC GTAATA AGTATCAGCGCG        TTTTTTTTATCTATT 100 32
A1D48_RS00600 NONE
        coaD  119679 ..  119691 -  -9.1  -3.91352   ATAGTCGCAACGAAA                CACGC ACA GCGTG                CGACGTTCTATTGCC  73 81
       coaBC NONE
A1D48_RS00565  115624 ..  115644 -    -9  -3.33492   GCACCCACGCTATAA            CCGCAAAC TCAGC GCTTGCGG            CAGTATTATGACGTT  71 58
        slmA  114811 ..  114827 -  -2.2  -3.36991   CATTACGCTGAAAGA              CCTGAT TGCCT ATCTGG              AAGAAAAACCTGATA  45 171
A1D48_RS00540  112422 ..  112451 -  -5.6  -3.93695   CGTACTACCGATAAA       CGCGAGAGCCCGC ATAAG GCGGGCGCT-GTG       ACATATTGAGCGCCA  63 44
A1D48_RS00530  110528 ..  110546 -  -8.8  -4.40882   GATAAATTAAAATAA             CGGCGC CCTGGAC GCGCCG             CCGGTGAATCATTTC  84 42
A1D48_RS00525  109649 ..  109676 -  -9.2   -3.4678   ATCCGCAGATCACAA        CGCTGAGCAG ATGGCTGG CTGCTCAGCA         TATTCCCGGATTTGG  73 44
A1D48_RS00515  107121 ..  107136 -  -3.3  -2.78816   TGACTGGGCATGATA              CTGAA AGTGGG TTCAG               TCTGCCAACAATTTG  43 22
        rpoZ  106786 ..  106796 -  -2.4  -2.83082   TCAAACAGATACAAG                 GGCG ACC CGCT                 TTGTGATTAACGACG  40 32
        spoT NONE
        trmH NONE
        recG  101858 ..  101893 -  -4.5  -2.76696   TTTTCGCGCAATAAG    GGTTTGTACGGCGGC ATTAAA GCCGCCGTGCTCACT     AGGCGTTGGAATAAC  47 24
        xanP   99002 ..   99021 - -10.7  -2.63479   AAGAGCGTTACAGCA            GCGGCGA ATCGTG TCGCCGC             CGCAGGGTTTTTACG  74 36
A1D48_RS00480   96804 ..   96827 -  -2.3  -3.38812   CGTTGGGCAACAATA          GCCAGAAGC CCGATT ACGCCTGGC           ATGAGGGTACGGCCT  45 400
A1D48_RS00465   92952 ..   92962 -    -4  -2.96712   AGTCTTAATAATAAG                 CAAA TAC TTTG                 TCCCGAAATAGAGGA  46 68
A1D48_RS00445 NONE
A1D48_RS00440   89423 ..   89439 -  -3.5  -4.35327   CCAGTAAAAAGCAAA              CGCGCCC GCC GGGAGTG              GCAGACATATTATGC  62 133
A1D48_RS00435 NONE
        misL   84856 ..   84874 - -14.6  -4.07568   CGCTTCCGGGTAAAA             GCCGCTGA AGA TCAGCGGC             TCTGTTGTTACCTGA 100 42
A1D48_RS00410   81957 ..   81977 - -14.1  -4.43911   AAATGGCAAGTAAAA            TAGCCCCAT TAA ATGGGGCTA            TTTAGTCTCTTCAGG 100 48
A1D48_RS00380   75446 ..   75473 -  -9.2  -2.71763   CGGATAACGAGATTA        TGCAGCATCGACG TAT CG-CGATGCTGGA        GCTGGTACAAAAGCA  60 480
A1D48_RS00335   66617 ..   66629 -  -3.3  -3.21395   ATTCGCTCCAGAATA                CGCGA TTT TGGCG                AACAGAAACCGGTTA  46 80
A1D48_RS00330   64786 ..   64799 -  -3.7   -4.0896   AAACGTTCGGTAAAA               CTGGC GCTG GCCGG                TGCGCCGCTGCTACT  60 422
A1D48_RS00320 NONE
A1D48_RS00315   62972 ..   62982 -  -6.8  -2.71325   TGATTGATAAAGTGA                 GCAG CGT CTGC                 TGTTGGCGCTTAGCG  55 105
A1D48_RS00310   61866 ..   61897 - -14.6   -2.7186   AAATTTGTTTAATTA      CCCGTTGTTGAAGT GCTC ATTTCAACAACGGG       ACAGGCAAATTATAG  89 226
A1D48_RS00225   45243 ..   45259 -  -2.2  -3.54158   GATTTGAATAACGAA              GCCG ATCCGCAGG CGGC              GTTGCAGGCTATCAT  47 442
        tisB   42720 ..   42741 - -17.3  -3.69354   GCGGATAAGGTGAAA           GGGGAGCGG TTGC CCGCTCCCC            TTCGGTGCGGCTTGA 100 48
A1D48_RS00195   41758 ..   41777 -  -7.8  -4.92385   GATATGTAAACAAAA            GCGGCAAC AAAT GTTGCCGA             GAATGTGTTACGTCT  87 59
        emrD   40394 ..   40414 - -15.4  -3.57144   CGCCGGAGTGTGAAA            CGCCCGGC AAAAA GCCGGGCG            AGGGGAACGTTAAAC 100 35
        dsdX NONE
        dsdA   35458 ..   35497 -  -6.5  -3.30771   TCACAGGCCTGATAA GCGTAGCGCCATCAGGC GATGGCGT GCCGGATGGCGC-A-GC  CGTCTTTCCGGCACT  59 50
A1D48_RS00135   30287 ..   30316 - -10.7   -3.6707   ATGGAAGAGGTGAAA       GGGTTCCGTCAGC TATG GGTGACGGAAACC        GGGCGATAAATCAGG  83 36
        torR   15531 ..   15565 -   -10  -3.15663   AGGCAGCGCCATCAA     CATTGTGGATATCGCC TGG GGCGATAACGACATTG     AAGTGCAGCGAAACT  67 399
        torS   11630 ..   11667 -  -8.4  -3.65529   ACACGGCGATGGAAA  CTGCGCTG-CGGCAAGCG CTGA CGCA-GCTGGCAGCGCAG   CCGACGCAGATCACC  68 469
A1D48_RS00025    6538 ..    6563 - -14.9  -2.89742   GGTAAGGCTGACATA         GAATGCCTGAA TACA TTCAGGCATTC          TTTATTATTAGTAGC  89 33
