STho1984_RS00040	SM00852	Probable molybdopterin binding domain
STho1984_RS00070	SM00271	DnaJ molecular chaperone homology domain
STho1984_RS00095	SM00495	Chitin-binding domain type 3
STho1984_RS00095	SM00636	STho1984_RS00095
STho1984_RS00155	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS00235	SM00904	Riboflavin kinase
STho1984_RS00270	SM00448	cheY-homologous receiver domain
STho1984_RS00275	SM00091	PAS domain
STho1984_RS00275	SM00387	Histidine kinase-like ATPases
STho1984_RS00340	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
STho1984_RS00345	SM00851	MGS-like domain
STho1984_RS00345	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
STho1984_RS00390	SM00893	Electron transfer flavoprotein domain
STho1984_RS00395	SM00893	Electron transfer flavoprotein domain
STho1984_RS00465	SM00650	Ribosomal RNA adenine dimethylases
STho1984_RS00485	SM00271	DnaJ molecular chaperone homology domain
STho1984_RS00495	SM00487	DEAD-like helicases superfamily
STho1984_RS00495	SM00490	helicase superfamily c-terminal domain
STho1984_RS00500	SM00486	DNA polymerase type-B family
STho1984_RS00515	SM01007	Class II Aldolase and Adducin N-terminal domain
STho1984_RS00530	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS00540	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS00580	SM01329	STho1984_RS00580
STho1984_RS00585	SM00917	LeuA allosteric (dimerisation) domain
STho1984_RS00610	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS00680	SM00842	Cell division protein FtsA
STho1984_RS00685	SM00864	Tubulin/FtsZ family, GTPase domain
STho1984_RS00685	SM00865	Tubulin/FtsZ family, C-terminal domain
STho1984_RS00700	SM00957	SecA DEAD-like domain
STho1984_RS00700	SM00958	SecA preprotein cross-linking domain
STho1984_RS00735	SM01240	STho1984_RS00735
STho1984_RS00760	SM00644	STho1984_RS00760
STho1984_RS00785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS00785	SM00895	STho1984_RS00785
STho1984_RS00860	SM00226	Low molecular weight phosphatase family
STho1984_RS00885	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS00885	SM01134	STho1984_RS00885
STho1984_RS00910	SM00564	beta-propeller repeat
STho1984_RS00920	SM00947	Carbonic anhydrase
STho1984_RS00925	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS01045	SM00487	DEAD-like helicases superfamily
STho1984_RS01045	SM00490	helicase superfamily c-terminal domain
STho1984_RS01045	SM00847	Helicase associated domain (HA2)  Add an annotation
STho1984_RS01060	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS01140	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
STho1984_RS01145	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
STho1984_RS01170	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
STho1984_RS01215	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
STho1984_RS01225	SM00935	Outer membrane protein (OmpH-like)
STho1984_RS01255	SM00481	DNA polymerase alpha chain like domain
STho1984_RS01265	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
STho1984_RS01280	SM00977	TilS substrate C-terminal domain
STho1984_RS01295	SM01322	STho1984_RS01295
STho1984_RS01335	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS01335	SM00930	STho1984_RS01335
STho1984_RS01400	SM00257	Lysin motif
STho1984_RS01405	SM00849	Metallo-beta-lactamase superfamily
STho1984_RS01420	SM00479	STho1984_RS01420
STho1984_RS01465	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS01465	SM01086	C-terminal, D2-small domain, of ClpB protein
STho1984_RS01775	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
STho1984_RS01885	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS01890	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS01940	SM00422	helix_turn_helix, mercury resistance
STho1984_RS01990	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS02010	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS02035	SM01004	Delta-aminolevulinic acid dehydratase
STho1984_RS02040	SM00869	Autotransporter beta-domain
STho1984_RS02100	SM00267	diguanylate cyclase
STho1984_RS02165	SM00448	cheY-homologous receiver domain
STho1984_RS02165	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS02170	SM00091	PAS domain
STho1984_RS02170	SM00387	Histidine kinase-like ATPases
STho1984_RS02170	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS02185	SM00642	Alpha-amylase domain
STho1984_RS02210	SM01323	STho1984_RS02210
STho1984_RS02235	SM00507	HNH nucleases
STho1984_RS02290	SM00861	Transketolase, pyrimidine binding domain
STho1984_RS02305	SM00981	STho1984_RS02305
STho1984_RS02320	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS02330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS02330	SM00866	STho1984_RS02330
STho1984_RS02365	SM00671	Sel1-like repeats.
STho1984_RS02370	SM00671	Sel1-like repeats.
STho1984_RS02425	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS02425	SM00994	ClpX C4-type zinc finger
STho1984_RS02425	SM01086	C-terminal, D2-small domain, of ClpB protein
STho1984_RS02430	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS02430	SM00464	Found in ATP-dependent protease La (LON)
STho1984_RS02435	SM00411	bacterial (prokaryotic) histone like domain
STho1984_RS02475	SM00344	helix_turn_helix ASNC type
STho1984_RS02480	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS02485	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS02490	SM00938	Nitrogen regulatory protein P-II
STho1984_RS02515	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS02535	SM01266	STho1984_RS02535
STho1984_RS02600	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS02610	SM00493	STho1984_RS02610
STho1984_RS02615	SM00387	Histidine kinase-like ATPases
STho1984_RS02675	SM00422	helix_turn_helix, mercury resistance
STho1984_RS02685	SM00244	prohibitin homologues
STho1984_RS02690	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS02705	SM00822	STho1984_RS02705
STho1984_RS02715	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS02735	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS02735	SM00930	STho1984_RS02735
STho1984_RS02745	SM00450	Rhodanese Homology Domain
STho1984_RS02760	SM00346	helix_turn_helix isocitrate lyase regulation
STho1984_RS02845	SM01001	AIR carboxylase
STho1984_RS02860	SM00840	STho1984_RS02860
STho1984_RS02920	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS02920	SM00448	cheY-homologous receiver domain
STho1984_RS02935	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS03010	SM00387	Histidine kinase-like ATPases
STho1984_RS03020	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS03055	SM00869	Autotransporter beta-domain
STho1984_RS03075	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS03105	SM00923	MbtH-like protein
STho1984_RS03110	SM00824	Thioesterase
STho1984_RS03120	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS03160	SM00822	STho1984_RS03160
STho1984_RS03190	SM00470	ParB-like nuclease domain
STho1984_RS03225	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS03290	SM00764	Citrate lyase ligase C-terminal domain
STho1984_RS03295	SM00091	PAS domain
STho1984_RS03295	SM00387	Histidine kinase-like ATPases
STho1984_RS03300	SM00448	cheY-homologous receiver domain
STho1984_RS03315	SM00357	Cold shock protein domain
STho1984_RS03335	SM00729	Elongator protein 3, MiaB family, Radical SAM
STho1984_RS03355	SM00936	Penicillin-binding protein 5, C-terminal domain 
STho1984_RS03390	SM00855	Phosphoglycerate mutase family
STho1984_RS03420	SM00858	STho1984_RS03420
STho1984_RS03435	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS03445	SM00671	Sel1-like repeats.
STho1984_RS03455	SM00271	DnaJ molecular chaperone homology domain
STho1984_RS03485	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS03500	SM00062	Bacterial periplasmic substrate-binding proteins
STho1984_RS03510	SM00116	Domain in cystathionine beta-synthase and other proteins.
STho1984_RS03510	SM01091	Transporter associated domain
STho1984_RS03525	SM00729	Elongator protein 3, MiaB family, Radical SAM
STho1984_RS03685	SM00448	cheY-homologous receiver domain
STho1984_RS03685	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS03690	SM00387	Histidine kinase-like ATPases
STho1984_RS03690	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS03735	SM00796	Allophanate hydrolase subunit 1
STho1984_RS03740	SM00797	Allophanate hydrolase subunit 2
STho1984_RS03750	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
STho1984_RS03750	SM01232	STho1984_RS03750
STho1984_RS03790	SM00861	Transketolase, pyrimidine binding domain
STho1984_RS03805	SM00881	CoA binding domain
STho1984_RS03970	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS03975	SM00855	Phosphoglycerate mutase family
STho1984_RS04005	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04030	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS04060	SM00866	STho1984_RS04060
STho1984_RS04085	SM00729	Elongator protein 3, MiaB family, Radical SAM
STho1984_RS04085	SM00876	Biotin and Thiamin Synthesis associated domain
STho1984_RS04105	SM00487	DEAD-like helicases superfamily
STho1984_RS04105	SM00490	helicase superfamily c-terminal domain
STho1984_RS04115	SM00364	Leucine-rich repeats, bacterial type
STho1984_RS04115	SM00369	Leucine-rich repeats, typical (most populated) subfamily
STho1984_RS04125	SM00729	Elongator protein 3, MiaB family, Radical SAM
STho1984_RS04130	SM00852	Probable molybdopterin binding domain
STho1984_RS04175	SM00155	Phospholipase D. Active site motifs.
STho1984_RS04200	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04215	SM00487	DEAD-like helicases superfamily
STho1984_RS04215	SM00490	helicase superfamily c-terminal domain
STho1984_RS04220	SM00487	DEAD-like helicases superfamily
STho1984_RS04220	SM00488	STho1984_RS04220
STho1984_RS04220	SM00491	STho1984_RS04220
STho1984_RS04255	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04265	SM00062	Bacterial periplasmic substrate-binding proteins
STho1984_RS04265	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
STho1984_RS04290	SM00529	Helix-turn-helix diphteria tox regulatory element
STho1984_RS04305	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04345	SM00852	Probable molybdopterin binding domain
STho1984_RS04355	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04375	SM00729	Elongator protein 3, MiaB family, Radical SAM
STho1984_RS04390	SM00893	Electron transfer flavoprotein domain
STho1984_RS04395	SM00893	Electron transfer flavoprotein domain
STho1984_RS04440	SM00936	Penicillin-binding protein 5, C-terminal domain 
STho1984_RS04445	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS04445	SM01134	STho1984_RS04445
STho1984_RS04450	SM00014	Acid phosphatase homologues
STho1984_RS04515	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04555	SM00062	Bacterial periplasmic substrate-binding proteins
STho1984_RS04555	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
STho1984_RS04570	SM00062	Bacterial periplasmic substrate-binding proteins
STho1984_RS04570	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
STho1984_RS04575	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04590	SM00644	STho1984_RS04590
STho1984_RS04645	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04650	SM00357	Cold shock protein domain
STho1984_RS04660	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04660	SM01086	C-terminal, D2-small domain, of ClpB protein
STho1984_RS04685	SM00316	Ribosomal protein S1-like RNA-binding domain
STho1984_RS04700	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04705	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04715	SM00344	helix_turn_helix ASNC type
STho1984_RS04720	SM00843	STho1984_RS04720
STho1984_RS04730	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04740	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS04820	SM00316	Ribosomal protein S1-like RNA-binding domain
STho1984_RS04825	SM00411	bacterial (prokaryotic) histone like domain
STho1984_RS04830	SM00849	Metallo-beta-lactamase superfamily
STho1984_RS04835	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS04900	SM00849	Metallo-beta-lactamase superfamily
STho1984_RS04920	SM00344	helix_turn_helix ASNC type
STho1984_RS04990	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS05010	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS05165	SM00635	Bacterial Ig-like domain 2
STho1984_RS05195	SM00232	JAB/MPN domain
STho1984_RS05205	SM00060	Fibronectin type 3 domain
STho1984_RS05260	SM00981	STho1984_RS05260
STho1984_RS05265	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS05335	SM00851	MGS-like domain
STho1984_RS05345	SM00881	CoA binding domain
STho1984_RS05350	SM00992	Hemimethylated DNA-binding protein YccV like
STho1984_RS05355	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
STho1984_RS05365	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS05435	SM00387	Histidine kinase-like ATPases
STho1984_RS05435	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS05440	SM00448	cheY-homologous receiver domain
STho1984_RS05440	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS05445	SM00095	Transthyretin
STho1984_RS05450	SM00903	Flavin reductase like domain
STho1984_RS05460	SM00347	helix_turn_helix multiple antibiotic resistance protein
STho1984_RS05500	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS05505	SM00849	Metallo-beta-lactamase superfamily
STho1984_RS05520	SM00271	DnaJ molecular chaperone homology domain
STho1984_RS05650	SM00481	DNA polymerase alpha chain like domain
STho1984_RS05680	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS05705	SM00506	Appr-1"-p processing enzyme
STho1984_RS05710	SM00155	Phospholipase D. Active site motifs.
STho1984_RS05750	SM00450	Rhodanese Homology Domain
STho1984_RS05755	SM00867	YceI-like domain 
STho1984_RS05835	SM00858	STho1984_RS05835
STho1984_RS05880	SM00047	Lysozyme subfamily 2
STho1984_RS05895	SM00316	Ribosomal protein S1-like RNA-binding domain
STho1984_RS05905	SM00363	S4 RNA-binding domain
STho1984_RS05945	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
STho1984_RS05950	SM00822	STho1984_RS05950
STho1984_RS05960	SM00825	Beta-ketoacyl synthase
STho1984_RS06050	SM00257	Lysin motif
STho1984_RS06055	SM00487	DEAD-like helicases superfamily
STho1984_RS06055	SM00490	helicase superfamily c-terminal domain
STho1984_RS06055	SM00982	STho1984_RS06055
STho1984_RS06055	SM01058	CarD-like/TRCF domain
STho1984_RS06065	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS06105	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS06120	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
STho1984_RS06125	SM00387	Histidine kinase-like ATPases
STho1984_RS06130	SM00448	cheY-homologous receiver domain
STho1984_RS06130	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS06165	SM01329	STho1984_RS06165
STho1984_RS06190	SM00458	Ricin-type beta-trefoil
STho1984_RS06195	SM00357	Cold shock protein domain
STho1984_RS06290	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS06295	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS06325	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS06330	SM00422	helix_turn_helix, mercury resistance
STho1984_RS06345	SM00830	Chorismate mutase type II
STho1984_RS06400	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS06420	SM00267	diguanylate cyclase
STho1984_RS06430	SM00763	PrkA AAA domain
STho1984_RS06455	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
STho1984_RS06475	SM00870	STho1984_RS06475
STho1984_RS06495	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
STho1984_RS06495	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
STho1984_RS06495	SM00493	STho1984_RS06495
STho1984_RS06500	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
STho1984_RS06550	SM00465	GIY-YIG type nucleases (URI domain)
STho1984_RS06580	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS06595	SM01060	STho1984_RS06595
STho1984_RS06655	SM00477	DNA/RNA non-specific endonuclease
STho1984_RS06655	SM00892	DNA/RNA non-specific endonuclease
STho1984_RS06660	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
STho1984_RS06685	SM00873	B3/4 domain
STho1984_RS06685	SM00874	tRNA synthetase B5 domain
STho1984_RS06685	SM00896	Ferredoxin-fold anticodon binding domain
STho1984_RS06690	SM00411	bacterial (prokaryotic) histone like domain
STho1984_RS06705	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS06760	SM00893	Electron transfer flavoprotein domain
STho1984_RS06765	SM00893	Electron transfer flavoprotein domain
STho1984_RS06770	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS06780	SM00882	Coenzyme A transferase
STho1984_RS06845	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS06865	SM00257	Lysin motif
STho1984_RS06905	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS06910	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS06925	SM00387	Histidine kinase-like ATPases
STho1984_RS06925	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS06930	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS06930	SM00448	cheY-homologous receiver domain
STho1984_RS06945	SM00422	helix_turn_helix, mercury resistance
STho1984_RS06950	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS06950	SM00448	cheY-homologous receiver domain
STho1984_RS06955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS06955	SM00387	Histidine kinase-like ATPases
STho1984_RS06955	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS06955	SM00448	cheY-homologous receiver domain
STho1984_RS07010	SM00028	Tetratricopeptide repeats
STho1984_RS07070	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS07145	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS07165	SM00479	STho1984_RS07165
STho1984_RS07215	SM00347	helix_turn_helix multiple antibiotic resistance protein
STho1984_RS07240	SM00363	S4 RNA-binding domain
STho1984_RS07260	SM00478	endonuclease III
STho1984_RS07260	SM00525	STho1984_RS07260
STho1984_RS07270	SM00900	STho1984_RS07270
STho1984_RS07330	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS07360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS07360	SM00387	Histidine kinase-like ATPases
STho1984_RS07360	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS07380	SM00448	cheY-homologous receiver domain
STho1984_RS07380	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS07400	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
STho1984_RS07400	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
STho1984_RS07460	SM00116	Domain in cystathionine beta-synthase and other proteins.
STho1984_RS07460	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS07495	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS07500	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS07530	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
STho1984_RS07555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS07555	SM00895	STho1984_RS07555
STho1984_RS07605	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS07610	SM00347	helix_turn_helix multiple antibiotic resistance protein
STho1984_RS07710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS07710	SM00895	STho1984_RS07710
STho1984_RS07740	SM00347	helix_turn_helix multiple antibiotic resistance protein
STho1984_RS07780	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS07795	SM00642	Alpha-amylase domain
STho1984_RS07800	SM00642	Alpha-amylase domain
STho1984_RS07805	SM00642	Alpha-amylase domain
STho1984_RS07835	SM00919	Malic enzyme, NAD binding domain
STho1984_RS07835	SM01274	STho1984_RS07835
STho1984_RS07840	SM00829	Enoylreductase
STho1984_RS07860	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS07895	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS07950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS07950	SM00895	STho1984_RS07950
STho1984_RS07955	SM00829	Enoylreductase
STho1984_RS08000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS08035	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS08100	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS08100	SM01134	STho1984_RS08100
STho1984_RS08115	SM00867	YceI-like domain 
STho1984_RS08130	SM01150	STho1984_RS08130
STho1984_RS08140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
STho1984_RS08140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS08140	SM00319	Homologues of the ligand binding domain of Tar
STho1984_RS08145	SM00829	Enoylreductase
STho1984_RS08170	SM00062	Bacterial periplasmic substrate-binding proteins
STho1984_RS08180	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS08210	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS08210	SM00487	DEAD-like helicases superfamily
STho1984_RS08210	SM00490	helicase superfamily c-terminal domain
STho1984_RS08210	SM00847	Helicase associated domain (HA2)  Add an annotation
STho1984_RS08260	SM00890	Domain of unknown function
STho1984_RS08285	SM00487	DEAD-like helicases superfamily
STho1984_RS08285	SM00490	helicase superfamily c-terminal domain
STho1984_RS08295	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
STho1984_RS08300	SM00463	Small MutS-related domain
STho1984_RS08310	SM00100	Cyclic nucleotide-monophosphate binding domain
STho1984_RS08310	SM00419	helix_turn_helix, cAMP Regulatory protein
STho1984_RS08330	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS08335	SM00873	B3/4 domain
STho1984_RS08365	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS08365	SM00871	Bacterial transcription activator, effector binding domain
STho1984_RS08385	SM00822	STho1984_RS08385
STho1984_RS08415	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
STho1984_RS08425	SM00091	PAS domain
STho1984_RS08425	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS08440	SM00450	Rhodanese Homology Domain
STho1984_RS08465	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS08485	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS08490	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS08525	SM00357	Cold shock protein domain
STho1984_RS08525	SM00955	STho1984_RS08525
STho1984_RS08530	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS08530	SM00091	PAS domain
STho1984_RS08530	SM00267	diguanylate cyclase
STho1984_RS08540	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS08540	SM01134	STho1984_RS08540
STho1984_RS08555	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
STho1984_RS08560	SM00028	Tetratricopeptide repeats
STho1984_RS08570	SM00014	Acid phosphatase homologues
STho1984_RS08595	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
STho1984_RS08595	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
STho1984_RS08595	SM00493	STho1984_RS08595
STho1984_RS08610	SM00822	STho1984_RS08610
STho1984_RS08620	SM00363	S4 RNA-binding domain
STho1984_RS08630	SM00481	DNA polymerase alpha chain like domain
STho1984_RS08715	SM00155	Phospholipase D. Active site motifs.
STho1984_RS08730	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS08735	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS08770	SM00528	Domain in histone-like proteins of HNS family
STho1984_RS08780	SM00448	cheY-homologous receiver domain
STho1984_RS08810	SM00671	Sel1-like repeats.
STho1984_RS08830	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS08840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS08840	SM00387	Histidine kinase-like ATPases
STho1984_RS08845	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS08845	SM00448	cheY-homologous receiver domain
STho1984_RS08890	SM00937	STho1984_RS08890
STho1984_RS08910	SM01400	STho1984_RS08910
STho1984_RS08985	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
STho1984_RS09015	SM01091	Transporter associated domain
STho1984_RS09020	SM01005	Alanine racemase, C-terminal domain
STho1984_RS09035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS09095	SM00341	Helicase and RNase D C-terminal
STho1984_RS09095	SM00474	3'-5' exonuclease
STho1984_RS09115	SM00487	DEAD-like helicases superfamily
STho1984_RS09115	SM00491	STho1984_RS09115
STho1984_RS09145	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS09150	SM01091	Transporter associated domain
STho1984_RS09195	SM00357	Cold shock protein domain
STho1984_RS09220	SM00346	helix_turn_helix isocitrate lyase regulation
STho1984_RS09235	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
STho1984_RS09235	SM00245	tail specific protease
STho1984_RS09240	SM00945	ProQ/FINO family
STho1984_RS09245	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
STho1984_RS09355	SM00506	Appr-1"-p processing enzyme
STho1984_RS09425	SM00479	STho1984_RS09425
STho1984_RS09485	SM00257	Lysin motif
STho1984_RS09495	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS09505	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS09510	SM00278	Helix-hairpin-helix DNA-binding motif class 1
STho1984_RS09580	SM00836	DALR anticodon binding domain
STho1984_RS09580	SM01016	Arginyl tRNA synthetase N terminal dom
STho1984_RS09615	SM00448	cheY-homologous receiver domain
STho1984_RS09620	SM00448	cheY-homologous receiver domain
STho1984_RS09625	SM00138	Methyltransferase, chemotaxis proteins 
STho1984_RS09630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
STho1984_RS09630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS09630	SM00319	Homologues of the ligand binding domain of Tar
STho1984_RS09635	SM00260	Two component signalling adaptor domain
STho1984_RS09640	SM00073	Histidine Phosphotransfer domain
STho1984_RS09640	SM00260	Two component signalling adaptor domain
STho1984_RS09640	SM00387	Histidine kinase-like ATPases
STho1984_RS09640	SM01231	STho1984_RS09640
STho1984_RS09760	SM00278	Helix-hairpin-helix DNA-binding motif class 1
STho1984_RS09760	SM00465	GIY-YIG type nucleases (URI domain)
STho1984_RS09765	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS09765	SM00448	cheY-homologous receiver domain
STho1984_RS09780	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS09785	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS09800	SM00062	Bacterial periplasmic substrate-binding proteins
STho1984_RS09800	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
STho1984_RS09840	SM00642	Alpha-amylase domain
STho1984_RS09885	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS09935	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS09955	SM00267	diguanylate cyclase
STho1984_RS09985	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
STho1984_RS10000	SM00357	Cold shock protein domain
STho1984_RS10060	SM00671	Sel1-like repeats.
STho1984_RS10125	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS10135	SM00226	Low molecular weight phosphatase family
STho1984_RS10140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
STho1984_RS10170	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS10250	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS10260	SM00877	STho1984_RS10260
STho1984_RS10265	SM00877	STho1984_RS10265
STho1984_RS10295	SM00877	STho1984_RS10295
STho1984_RS10300	SM00877	STho1984_RS10300
STho1984_RS10340	SM00877	STho1984_RS10340
STho1984_RS10345	SM00877	STho1984_RS10345
STho1984_RS10375	SM00871	Bacterial transcription activator, effector binding domain
STho1984_RS10380	SM00936	Penicillin-binding protein 5, C-terminal domain 
STho1984_RS10395	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS10405	SM00479	STho1984_RS10405
STho1984_RS10470	SM00984	UDP binding domain
STho1984_RS10480	SM01350	STho1984_RS10480
STho1984_RS10615	SM00226	Low molecular weight phosphatase family
STho1984_RS10625	SM01091	Transporter associated domain
STho1984_RS10645	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS10645	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
STho1984_RS10645	SM00091	PAS domain
STho1984_RS10645	SM00267	diguanylate cyclase
STho1984_RS10650	SM00478	endonuclease III
STho1984_RS10650	SM01009	AlkA N-terminal domain
STho1984_RS10680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS10680	SM00387	Histidine kinase-like ATPases
STho1984_RS10680	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS10685	SM00448	cheY-homologous receiver domain
STho1984_RS10685	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS10800	SM00046	Diacylglycerol kinase catalytic domain (presumed)
STho1984_RS10805	SM01133	STho1984_RS10805
STho1984_RS10825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS10825	SM00866	STho1984_RS10825
STho1984_RS10895	SM00448	cheY-homologous receiver domain
STho1984_RS10895	SM00850	LytTr DNA-binding domain
STho1984_RS10900	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
STho1984_RS10900	SM00387	Histidine kinase-like ATPases
STho1984_RS10905	SM00422	helix_turn_helix, mercury resistance
STho1984_RS10920	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS10935	SM01217	STho1984_RS10935
STho1984_RS11045	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS11055	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS11075	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS11115	SM00518	AP endonuclease family 2
STho1984_RS11155	SM00841	Elongation factor P, C-terminal
STho1984_RS11155	SM01185	STho1984_RS11155
STho1984_RS11165	SM00014	Acid phosphatase homologues
STho1984_RS11175	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS11195	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS11215	SM00363	S4 RNA-binding domain
STho1984_RS11220	SM00487	DEAD-like helicases superfamily
STho1984_RS11220	SM00490	helicase superfamily c-terminal domain
STho1984_RS11255	SM00364	Leucine-rich repeats, bacterial type
STho1984_RS11280	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS11280	SM00448	cheY-homologous receiver domain
STho1984_RS11320	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS11345	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS11365	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS11375	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS11390	SM00387	Histidine kinase-like ATPases
STho1984_RS11395	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS11395	SM00448	cheY-homologous receiver domain
STho1984_RS11400	SM00387	Histidine kinase-like ATPases
STho1984_RS11400	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS11400	SM00448	cheY-homologous receiver domain
STho1984_RS11405	SM00434	DNA Topoisomerase IV
STho1984_RS11410	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
STho1984_RS11420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS11420	SM00895	STho1984_RS11420
STho1984_RS11500	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
STho1984_RS11505	SM00346	helix_turn_helix isocitrate lyase regulation
STho1984_RS11510	SM00852	Probable molybdopterin binding domain
STho1984_RS11575	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
STho1984_RS11615	SM00260	Two component signalling adaptor domain
STho1984_RS11615	SM00448	cheY-homologous receiver domain
STho1984_RS11620	SM00327	von Willebrand factor (vWF) type A domain
STho1984_RS11660	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS11660	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
STho1984_RS11665	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
STho1984_RS11710	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
STho1984_RS11750	SM00861	Transketolase, pyrimidine binding domain
STho1984_RS11780	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS11810	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS11825	SM00062	Bacterial periplasmic substrate-binding proteins
STho1984_RS11830	SM00062	Bacterial periplasmic substrate-binding proteins
STho1984_RS11860	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS11900	SM00859	Semialdehyde dehydrogenase, NAD binding domain
STho1984_RS11925	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS11945	SM00825	Beta-ketoacyl synthase
STho1984_RS11985	SM00463	Small MutS-related domain
STho1984_RS12035	SM00448	cheY-homologous receiver domain
STho1984_RS12040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS12040	SM00387	Histidine kinase-like ATPases
STho1984_RS12040	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS12110	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS12110	SM00267	diguanylate cyclase
STho1984_RS12200	SM00278	Helix-hairpin-helix DNA-binding motif class 1
STho1984_RS12200	SM00292	breast cancer carboxy-terminal domain
STho1984_RS12200	SM00532	Ligase N family
STho1984_RS12205	SM00771	ZipA, C-terminal domain (FtsZ-binding)
STho1984_RS12250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS12275	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS12295	SM00822	STho1984_RS12295
STho1984_RS12320	SM00646	STho1984_RS12320
STho1984_RS12335	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS12340	SM00877	STho1984_RS12340
STho1984_RS12345	SM00877	STho1984_RS12345
STho1984_RS12390	SM00877	STho1984_RS12390
STho1984_RS12415	SM00877	STho1984_RS12415
STho1984_RS12420	SM00919	Malic enzyme, NAD binding domain
STho1984_RS12420	SM01274	STho1984_RS12420
STho1984_RS12430	SM00861	Transketolase, pyrimidine binding domain
STho1984_RS12460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS12460	SM00387	Histidine kinase-like ATPases
STho1984_RS12505	SM01130	STho1984_RS12505
STho1984_RS12585	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS12585	SM00267	diguanylate cyclase
STho1984_RS12620	SM00116	Domain in cystathionine beta-synthase and other proteins.
STho1984_RS12620	SM01240	STho1984_RS12620
STho1984_RS12630	SM00869	Autotransporter beta-domain
STho1984_RS12670	SM00564	beta-propeller repeat
STho1984_RS12690	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS12700	SM00562	STho1984_RS12700
STho1984_RS12720	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS12730	SM01359	STho1984_RS12730
STho1984_RS12730	SM01360	STho1984_RS12730
STho1984_RS12735	SM00450	Rhodanese Homology Domain
STho1984_RS12770	SM00271	DnaJ molecular chaperone homology domain
STho1984_RS12855	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS12875	SM00938	Nitrogen regulatory protein P-II
STho1984_RS12880	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS12880	SM00448	cheY-homologous receiver domain
STho1984_RS12890	SM00387	Histidine kinase-like ATPases
STho1984_RS12890	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS12895	SM01211	STho1984_RS12895
STho1984_RS12905	SM00062	Bacterial periplasmic substrate-binding proteins
STho1984_RS12975	SM00358	Double-stranded RNA binding motif
STho1984_RS12975	SM00535	Ribonuclease III family
STho1984_RS13020	SM00487	DEAD-like helicases superfamily
STho1984_RS13020	SM00490	helicase superfamily c-terminal domain
STho1984_RS13040	SM00986	Uracil DNA glycosylase superfamily
STho1984_RS13040	SM00987	UreE urease accessory protein, C-terminal domain 
STho1984_RS13045	SM00967	RNA 2'-O ribose methyltransferase substrate binding
STho1984_RS13055	SM01144	STho1984_RS13055
STho1984_RS13060	SM00881	CoA binding domain
STho1984_RS13065	SM00155	Phospholipase D. Active site motifs.
STho1984_RS13105	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS13105	SM01086	C-terminal, D2-small domain, of ClpB protein
STho1984_RS13115	SM00363	S4 RNA-binding domain
STho1984_RS13130	SM00830	Chorismate mutase type II
STho1984_RS13140	SM00830	Chorismate mutase type II
STho1984_RS13155	SM00267	diguanylate cyclase
STho1984_RS13180	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS13180	SM00962	SRP54-type protein, GTPase domain
STho1984_RS13180	SM00963	SRP54-type protein, helical bundle domain
STho1984_RS13190	SM01091	Transporter associated domain
STho1984_RS13245	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS13300	SM00857	Resolvase, N terminal domain
STho1984_RS13310	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS13360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS13360	SM00387	Histidine kinase-like ATPases
STho1984_RS13360	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS13365	SM00448	cheY-homologous receiver domain
STho1984_RS13365	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS13415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS13415	SM00895	STho1984_RS13415
STho1984_RS13420	SM00257	Lysin motif
STho1984_RS13420	SM00749	bacterial OsmY and nodulation domain
STho1984_RS13430	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
STho1984_RS13435	SM00450	Rhodanese Homology Domain
STho1984_RS13445	SM00528	Domain in histone-like proteins of HNS family
STho1984_RS13465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS13500	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS13520	SM00347	helix_turn_helix multiple antibiotic resistance protein
STho1984_RS13590	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
STho1984_RS13600	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS13645	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS13645	SM01134	STho1984_RS13645
STho1984_RS13655	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
STho1984_RS13655	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS13660	SM00849	Metallo-beta-lactamase superfamily
STho1984_RS13755	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
STho1984_RS13755	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS13770	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS13795	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS13835	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS13840	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS13850	SM00194	Protein tyrosine phosphatase, catalytic domain
STho1984_RS13850	SM00404	Protein tyrosine phosphatase, catalytic domain motif
STho1984_RS13930	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS13955	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS14015	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
STho1984_RS14015	SM00534	ATPase domain of DNA mismatch repair MUTS family
STho1984_RS14050	SM01007	Class II Aldolase and Adducin N-terminal domain
STho1984_RS14065	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS14065	SM01134	STho1984_RS14065
STho1984_RS14070	SM00347	helix_turn_helix multiple antibiotic resistance protein
STho1984_RS14095	SM00257	Lysin motif
STho1984_RS14165	SM01101	STho1984_RS14165
STho1984_RS14190	SM00487	DEAD-like helicases superfamily
STho1984_RS14230	SM01192	STho1984_RS14230
STho1984_RS14230	SM01193	STho1984_RS14230
STho1984_RS14300	SM00954	Region found in RelA / SpoT proteins
STho1984_RS14310	SM00073	Histidine Phosphotransfer domain
STho1984_RS14310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS14310	SM00387	Histidine kinase-like ATPases
STho1984_RS14310	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS14310	SM00448	cheY-homologous receiver domain
STho1984_RS14320	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
STho1984_RS14325	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
STho1984_RS14375	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
STho1984_RS14375	SM00475	5'-3' exonuclease
STho1984_RS14385	SM01007	Class II Aldolase and Adducin N-terminal domain
STho1984_RS14410	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS14410	SM01134	STho1984_RS14410
STho1984_RS14455	SM00925	MltA specific insert domain
STho1984_RS14470	SM00646	STho1984_RS14470
STho1984_RS14480	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS14535	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
STho1984_RS14550	SM00927	DNA mismatch repair enzyme MutH
STho1984_RS14575	SM00563	Phosphate acyltransferases
STho1984_RS14580	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS14585	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS14715	SM00257	Lysin motif
STho1984_RS14730	SM00937	STho1984_RS14730
STho1984_RS14780	SM01022	STho1984_RS14780
STho1984_RS14820	SM01011	Aminopeptidase P, N-terminal domain
STho1984_RS14880	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
STho1984_RS14900	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS14905	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS14910	SM00861	Transketolase, pyrimidine binding domain
STho1984_RS14940	SM00829	Enoylreductase
STho1984_RS14955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS14955	SM00895	STho1984_RS14955
STho1984_RS14990	SM00731	SprT homologues.
STho1984_RS15015	SM00732	Likely ribonuclease with RNase H fold.
STho1984_RS15020	SM00346	helix_turn_helix isocitrate lyase regulation
STho1984_RS15025	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS15040	SM01152	STho1984_RS15040
STho1984_RS15050	SM00729	Elongator protein 3, MiaB family, Radical SAM
STho1984_RS15060	SM00870	STho1984_RS15060
STho1984_RS15080	SM00478	endonuclease III
STho1984_RS15080	SM00525	STho1984_RS15080
STho1984_RS15155	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS15225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
STho1984_RS15295	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
STho1984_RS15295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS15350	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS15380	SM00729	Elongator protein 3, MiaB family, Radical SAM
STho1984_RS15405	SM00563	Phosphate acyltransferases
STho1984_RS15410	SM00434	DNA Topoisomerase IV
STho1984_RS15415	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS15415	SM00871	Bacterial transcription activator, effector binding domain
STho1984_RS15425	SM00448	cheY-homologous receiver domain
STho1984_RS15425	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS15430	SM00387	Histidine kinase-like ATPases
STho1984_RS15430	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS15445	SM00387	Histidine kinase-like ATPases
STho1984_RS15445	SM00433	TopoisomeraseII
STho1984_RS15535	SM00244	prohibitin homologues
STho1984_RS15550	SM01118	STho1984_RS15550
STho1984_RS15555	SM00287	Bacterial SH3 domain homologues
STho1984_RS15560	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
STho1984_RS15570	SM00905	Dihydroneopterin aldolase
STho1984_RS15575	SM01207	STho1984_RS15575
STho1984_RS15595	SM00400	zinc finger
STho1984_RS15595	SM00493	STho1984_RS15595
STho1984_RS15595	SM00766	DNA primase DnaG DnaB-binding
STho1984_RS15625	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
STho1984_RS15625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS15630	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
STho1984_RS15630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
STho1984_RS15795	SM00858	STho1984_RS15795
STho1984_RS15805	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS15805	SM01134	STho1984_RS15805
STho1984_RS15850	SM00829	Enoylreductase
STho1984_RS15855	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS15855	SM01134	STho1984_RS15855
STho1984_RS15880	SM00749	bacterial OsmY and nodulation domain
STho1984_RS15885	SM00859	Semialdehyde dehydrogenase, NAD binding domain
STho1984_RS15900	SM00465	GIY-YIG type nucleases (URI domain)
STho1984_RS15945	SM00487	DEAD-like helicases superfamily
STho1984_RS15945	SM00490	helicase superfamily c-terminal domain
STho1984_RS15950	SM00028	Tetratricopeptide repeats
STho1984_RS15955	SM00316	Ribosomal protein S1-like RNA-binding domain
STho1984_RS15955	SM00322	K homology RNA-binding domain
STho1984_RS15960	SM01387	STho1984_RS15960
STho1984_RS15980	SM00316	Ribosomal protein S1-like RNA-binding domain
STho1984_RS15980	SM00322	K homology RNA-binding domain
STho1984_RS16020	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS16030	SM01103	STho1984_RS16030
STho1984_RS16110	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS16140	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS16185	SM00073	Histidine Phosphotransfer domain
STho1984_RS16185	SM00091	PAS domain
STho1984_RS16185	SM00387	Histidine kinase-like ATPases
STho1984_RS16185	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS16185	SM00448	cheY-homologous receiver domain
STho1984_RS16190	SM00729	Elongator protein 3, MiaB family, Radical SAM
STho1984_RS16245	SM01130	STho1984_RS16245
STho1984_RS16250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS16250	SM00895	STho1984_RS16250
STho1984_RS16290	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
STho1984_RS16295	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
STho1984_RS16335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS16335	SM00895	STho1984_RS16335
STho1984_RS16340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS16400	SM00316	Ribosomal protein S1-like RNA-binding domain
STho1984_RS16430	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS16430	SM00267	diguanylate cyclase
STho1984_RS16435	SM00829	Enoylreductase
STho1984_RS16455	SM00878	Biotin carboxylase C-terminal domain
STho1984_RS16495	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS16495	SM00267	diguanylate cyclase
STho1984_RS16620	SM00422	helix_turn_helix, mercury resistance
STho1984_RS16635	SM00662	RNA polymerases D
STho1984_RS16640	SM00363	S4 RNA-binding domain
STho1984_RS16640	SM01390	STho1984_RS16640
STho1984_RS16705	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
STho1984_RS16710	SM01374	STho1984_RS16710
STho1984_RS16730	SM00322	K homology RNA-binding domain
STho1984_RS16745	SM01382	STho1984_RS16745
STho1984_RS16745	SM01383	STho1984_RS16745
STho1984_RS16765	SM01403	STho1984_RS16765
STho1984_RS16790	SM00838	Elongation factor G C-terminus
STho1984_RS16790	SM00889	Elongation factor G, domain IV
STho1984_RS16855	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS16890	SM00100	Cyclic nucleotide-monophosphate binding domain
STho1984_RS16890	SM00419	helix_turn_helix, cAMP Regulatory protein
STho1984_RS16950	SM00869	Autotransporter beta-domain
STho1984_RS16995	SM00965	Secretin and TonB N terminus short domain
STho1984_RS17040	SM00363	S4 RNA-binding domain
STho1984_RS17060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS17060	SM00387	Histidine kinase-like ATPases
STho1984_RS17060	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS17065	SM00448	cheY-homologous receiver domain
STho1984_RS17065	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS17075	SM00316	Ribosomal protein S1-like RNA-binding domain
STho1984_RS17075	SM00732	Likely ribonuclease with RNase H fold.
STho1984_RS17080	SM00899	STho1984_RS17080
STho1984_RS17130	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS17155	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS17160	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS17160	SM01134	STho1984_RS17160
STho1984_RS17170	SM00450	Rhodanese Homology Domain
STho1984_RS17205	SM01130	STho1984_RS17205
STho1984_RS17210	SM00346	helix_turn_helix isocitrate lyase regulation
STho1984_RS17230	SM00642	Alpha-amylase domain
STho1984_RS17235	SM00642	Alpha-amylase domain
STho1984_RS17240	SM00859	Semialdehyde dehydrogenase, NAD binding domain
STho1984_RS17255	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS17275	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS17310	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS17340	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS17345	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS17390	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS17395	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS17395	SM00962	SRP54-type protein, GTPase domain
STho1984_RS17395	SM00963	SRP54-type protein, helical bundle domain
STho1984_RS17425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
STho1984_RS17425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS17425	SM00319	Homologues of the ligand binding domain of Tar
STho1984_RS17470	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS17515	SM00014	Acid phosphatase homologues
STho1984_RS17530	SM00870	STho1984_RS17530
STho1984_RS17550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS17550	SM00866	STho1984_RS17550
STho1984_RS17570	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS17595	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS17615	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS17615	SM00267	diguanylate cyclase
STho1984_RS17620	SM00028	Tetratricopeptide repeats
STho1984_RS17680	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS17685	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS17715	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS17800	SM00357	Cold shock protein domain
STho1984_RS17865	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS17870	SM00047	Lysozyme subfamily 2
STho1984_RS17880	SM00642	Alpha-amylase domain
STho1984_RS17895	SM00346	helix_turn_helix isocitrate lyase regulation
STho1984_RS17935	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
STho1984_RS17945	SM01007	Class II Aldolase and Adducin N-terminal domain
STho1984_RS17950	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS18035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS18035	SM00895	STho1984_RS18035
STho1984_RS18050	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS18055	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
STho1984_RS18065	SM00971	Serine acetyltransferase, N-terminal
STho1984_RS18085	SM00450	Rhodanese Homology Domain
STho1984_RS18110	SM00829	Enoylreductase
STho1984_RS18200	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
STho1984_RS18200	SM01232	STho1984_RS18200
STho1984_RS18255	SM00849	Metallo-beta-lactamase superfamily
STho1984_RS18265	SM00532	Ligase N family
STho1984_RS18270	SM00072	Guanylate kinase homologues.
STho1984_RS18275	SM01409	STho1984_RS18275
STho1984_RS18280	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
STho1984_RS18280	SM00954	Region found in RelA / SpoT proteins
STho1984_RS18290	SM00487	DEAD-like helicases superfamily
STho1984_RS18290	SM00490	helicase superfamily c-terminal domain
STho1984_RS18330	SM00869	Autotransporter beta-domain
STho1984_RS18340	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS18355	SM00831	Cation transporter/ATPase, N-terminus
STho1984_RS18405	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS18430	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS18475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS18475	SM00866	STho1984_RS18475
STho1984_RS18495	SM00387	Histidine kinase-like ATPases
STho1984_RS18500	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS18500	SM00448	cheY-homologous receiver domain
STho1984_RS18520	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS18520	SM01134	STho1984_RS18520
STho1984_RS18650	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS18655	SM01235	STho1984_RS18655
STho1984_RS18675	SM00448	cheY-homologous receiver domain
STho1984_RS18675	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS18685	SM00073	Histidine Phosphotransfer domain
STho1984_RS18685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS18685	SM00387	Histidine kinase-like ATPases
STho1984_RS18685	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS18685	SM00448	cheY-homologous receiver domain
STho1984_RS18695	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
STho1984_RS18710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS18710	SM00895	STho1984_RS18710
STho1984_RS18725	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
STho1984_RS18735	SM00387	Histidine kinase-like ATPases
STho1984_RS18735	SM00433	TopoisomeraseII
STho1984_RS18745	SM00480	DNA polymerase III beta subunit
STho1984_RS18750	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS18750	SM00760	Bacterial dnaA protein helix-turn-helix domain
STho1984_RS18765	SM01234	STho1984_RS18765
STho1984_RS18815	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS18870	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS18915	SM01228	STho1984_RS18915
STho1984_RS18925	SM00344	helix_turn_helix ASNC type
STho1984_RS18935	SM00327	von Willebrand factor (vWF) type A domain
STho1984_RS18940	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS18955	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS18975	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS18985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS18985	SM00895	STho1984_RS18985
STho1984_RS19030	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS19105	SM00487	DEAD-like helicases superfamily
STho1984_RS19105	SM00490	helicase superfamily c-terminal domain
STho1984_RS19115	SM00357	Cold shock protein domain
STho1984_RS19115	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS19115	SM00959	Rho termination factor, N-terminal domain
STho1984_RS19140	SM00984	UDP binding domain
STho1984_RS19235	SM01219	STho1984_RS19235
STho1984_RS19305	SM00341	Helicase and RNase D C-terminal
STho1984_RS19305	SM00487	DEAD-like helicases superfamily
STho1984_RS19305	SM00490	helicase superfamily c-terminal domain
STho1984_RS19305	SM00956	STho1984_RS19305
STho1984_RS19400	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
STho1984_RS19500	SM00563	Phosphate acyltransferases
STho1984_RS19510	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
STho1984_RS19510	SM00474	3'-5' exonuclease
STho1984_RS19510	SM00475	5'-3' exonuclease
STho1984_RS19510	SM00482	DNA polymerase A domain
STho1984_RS19530	SM00729	Elongator protein 3, MiaB family, Radical SAM
STho1984_RS19535	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS19535	SM00448	cheY-homologous receiver domain
STho1984_RS19540	SM00091	PAS domain
STho1984_RS19540	SM00387	Histidine kinase-like ATPases
STho1984_RS19540	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS19545	SM01230	STho1984_RS19545
STho1984_RS19565	SM00729	Elongator protein 3, MiaB family, Radical SAM
STho1984_RS19620	SM01133	STho1984_RS19620
STho1984_RS19635	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS19635	SM01134	STho1984_RS19635
STho1984_RS19660	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS19680	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS19705	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS19735	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS19750	SM01007	Class II Aldolase and Adducin N-terminal domain
STho1984_RS19765	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS19770	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS19820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS19820	SM00387	Histidine kinase-like ATPases
STho1984_RS19820	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS19825	SM00448	cheY-homologous receiver domain
STho1984_RS19825	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS19870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS19870	SM00866	STho1984_RS19870
STho1984_RS19895	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS19915	SM01133	STho1984_RS19915
STho1984_RS19980	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS19980	SM01086	C-terminal, D2-small domain, of ClpB protein
STho1984_RS19995	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS20000	SM00487	DEAD-like helicases superfamily
STho1984_RS20000	SM00490	helicase superfamily c-terminal domain
STho1984_RS20110	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS20130	SM00859	Semialdehyde dehydrogenase, NAD binding domain
STho1984_RS20255	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
STho1984_RS20255	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
STho1984_RS20260	SM00649	Ribosomal protein L11/L12
STho1984_RS20285	SM00663	RNA polymerase I subunit A N-terminus
STho1984_RS20305	SM00876	Biotin and Thiamin Synthesis associated domain
STho1984_RS20360	SM00411	bacterial (prokaryotic) histone like domain
STho1984_RS20375	SM00387	Histidine kinase-like ATPases
STho1984_RS20375	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS20380	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS20380	SM00448	cheY-homologous receiver domain
STho1984_RS20385	SM01209	STho1984_RS20385
STho1984_RS20385	SM01210	STho1984_RS20385
STho1984_RS20390	SM00798	AICARFT/IMPCHase bienzyme
STho1984_RS20390	SM00851	MGS-like domain
STho1984_RS20445	SM01022	STho1984_RS20445
STho1984_RS20450	SM00346	helix_turn_helix isocitrate lyase regulation
STho1984_RS20455	SM01018	B12 binding domain
STho1984_RS20480	SM00363	S4 RNA-binding domain
STho1984_RS20675	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS20700	SM00563	Phosphate acyltransferases
STho1984_RS20750	SM00829	Enoylreductase
STho1984_RS20755	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS20760	SM01005	Alanine racemase, C-terminal domain
STho1984_RS20835	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS20845	SM00052	Putative diguanylate phosphodiesterase
STho1984_RS20850	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS20855	SM00422	helix_turn_helix, mercury resistance
STho1984_RS20940	SM00028	Tetratricopeptide repeats
STho1984_RS20950	SM00671	Sel1-like repeats.
STho1984_RS20960	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS20990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS20990	SM00387	Histidine kinase-like ATPases
STho1984_RS20990	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS20995	SM00448	cheY-homologous receiver domain
STho1984_RS20995	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS21010	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS21025	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS21055	SM00448	cheY-homologous receiver domain
STho1984_RS21060	SM00091	PAS domain
STho1984_RS21060	SM00387	Histidine kinase-like ATPases
STho1984_RS21065	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
STho1984_RS21100	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS21105	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS21150	SM00014	Acid phosphatase homologues
STho1984_RS21200	SM00883	Chaperonin 10 Kd subunit
STho1984_RS21225	SM00841	Elongation factor P, C-terminal
STho1984_RS21225	SM01185	STho1984_RS21225
STho1984_RS21240	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS21305	SM00479	STho1984_RS21305
STho1984_RS21310	SM00062	Bacterial periplasmic substrate-binding proteins
STho1984_RS21310	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
STho1984_RS21345	SM00646	STho1984_RS21345
STho1984_RS21350	SM00853	MutL C terminal dimerisation domain
STho1984_RS21350	SM01340	STho1984_RS21350
STho1984_RS21370	SM00244	prohibitin homologues
STho1984_RS21375	SM00244	prohibitin homologues
STho1984_RS21385	SM00788	Adenylosuccinate synthetase
STho1984_RS21395	SM00316	Ribosomal protein S1-like RNA-binding domain
STho1984_RS21395	SM00357	Cold shock protein domain
STho1984_RS21395	SM00955	STho1984_RS21395
STho1984_RS21400	SM00967	RNA 2'-O ribose methyltransferase substrate binding
STho1984_RS21460	SM00420	helix_turn_helix, Deoxyribose operon repressor
STho1984_RS21460	SM01134	STho1984_RS21460
STho1984_RS21485	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
STho1984_RS21495	SM01007	Class II Aldolase and Adducin N-terminal domain
STho1984_RS21595	SM01091	Transporter associated domain
STho1984_RS21680	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS21825	SM00642	Alpha-amylase domain
STho1984_RS21835	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS21840	SM00831	Cation transporter/ATPase, N-terminus
STho1984_RS21955	SM00354	helix_turn _helix lactose operon repressor
STho1984_RS21980	SM00829	Enoylreductase
STho1984_RS22130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
STho1984_RS22130	SM00895	STho1984_RS22130
STho1984_RS22240	SM00487	DEAD-like helicases superfamily
STho1984_RS22250	SM00833	Cobalamin synthesis protein cobW C-terminal domain
STho1984_RS22265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
STho1984_RS22265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS22265	SM00319	Homologues of the ligand binding domain of Tar
STho1984_RS22270	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS22315	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS22335	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS22340	SM00421	helix_turn_helix, Lux Regulon
STho1984_RS22355	SM00267	diguanylate cyclase
STho1984_RS22405	SM00749	bacterial OsmY and nodulation domain
STho1984_RS22435	SM01133	STho1984_RS22435
STho1984_RS22440	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
STho1984_RS22495	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS22500	SM00530	Helix-turn-helix XRE-family like proteins 
STho1984_RS22505	SM00382	ATPases associated with a variety of cellular activities
STho1984_RS22525	SM00855	Phosphoglycerate mutase family
STho1984_RS22530	SM00342	helix_turn_helix, arabinose operon control protein
STho1984_RS22530	SM00871	Bacterial transcription activator, effector binding domain
STho1984_RS22540	SM00448	cheY-homologous receiver domain
STho1984_RS22540	SM00862	Transcriptional regulatory protein, C terminal
STho1984_RS22545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
STho1984_RS22545	SM00387	Histidine kinase-like ATPases
STho1984_RS22545	SM00388	His Kinase A (phosphoacceptor) domain
STho1984_RS22590	SM00448	cheY-homologous receiver domain
STho1984_RS22590	SM00862	Transcriptional regulatory protein, C terminal
