locus-tag class description DS748_RS00005 PF13396 Phospholipase_D-nuclease N-terminal DS748_RS00005 PF13091 PLD-like domain DS748_RS00010 PF04269 Protein of unknown function, DUF440 DS748_RS00015 PF00027 Cyclic nucleotide-binding domain DS748_RS00015 PF00520 Ion transport protein DS748_RS00020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DS748_RS00020 PF00005 ABC transporter DS748_RS00025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DS748_RS00025 PF00005 ABC transporter DS748_RS00035 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS00040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS748_RS00050 PF01914 MarC family integral membrane protein DS748_RS00055 PF00465 Iron-containing alcohol dehydrogenase DS748_RS00055 PF00171 Aldehyde dehydrogenase family DS748_RS00060 PF00265 Thymidine kinase DS748_RS00065 PF00816 H-NS histone family DS748_RS00070 PF00483 Nucleotidyl transferase DS748_RS00075 PF00072 Response regulator receiver domain DS748_RS00080 PF01734 Patatin-like phospholipase DS748_RS00090 PF01842 ACT domain DS748_RS00090 PF00551 Formyl transferase DS748_RS00120 PF02665 Nitrate reductase gamma subunit DS748_RS00125 PF02613 Nitrate reductase delta subunit DS748_RS00130 PF13247 4Fe-4S dicluster domain DS748_RS00130 PF14711 Respiratory nitrate reductase beta C-terminal DS748_RS00135 PF14710 Respiratory nitrate reductase alpha N-terminal DS748_RS00135 PF01568 Molydopterin dinucleotide binding domain DS748_RS00135 PF00384 Molybdopterin oxidoreductase DS748_RS00140 PF07690 Major Facilitator Superfamily DS748_RS00150 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DS748_RS00150 PF07730 Histidine kinase DS748_RS00150 PF00672 HAMP domain DS748_RS00150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS00155 PF00196 Bacterial regulatory proteins, luxR family DS748_RS00155 PF00072 Response regulator receiver domain DS748_RS00160 PF11924 Inverse autotransporter, beta-domain DS748_RS00165 PF02635 DsrE/DsrF-like family DS748_RS00170 PF06150 ChaB DS748_RS00175 PF01699 Sodium/calcium exchanger protein DS748_RS00190 PF00180 Isocitrate/isopropylmalate dehydrogenase DS748_RS00195 PF00849 RNA pseudouridylate synthase DS748_RS00205 PF00293 NUDIX domain DS748_RS00215 PF04356 Protein of unknown function (DUF489) DS748_RS00220 PF08328 Adenylosuccinate lyase C-terminal DS748_RS00220 PF00206 Lyase DS748_RS00225 PF00072 Response regulator receiver domain DS748_RS00225 PF00486 Transcriptional regulatory protein, C terminal DS748_RS00230 PF08918 PhoQ Sensor DS748_RS00230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS00235 PF08007 Cupin superfamily protein DS748_RS00245 PF01546 Peptidase family M20/M25/M40 DS748_RS00245 PF07687 Peptidase dimerisation domain DS748_RS00250 PF00005 ABC transporter DS748_RS00250 PF08402 TOBE domain DS748_RS00255 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS00260 PF06767 Sif protein DS748_RS00265 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS00270 PF13416 Bacterial extracellular solute-binding protein DS748_RS00275 PF02146 Sir2 family DS748_RS00280 PF00480 ROK family DS748_RS00285 PF12704 MacB-like periplasmic core domain DS748_RS00285 PF02687 FtsX-like permease family DS748_RS00290 PF00005 ABC transporter DS748_RS00295 PF02687 FtsX-like permease family DS748_RS00295 PF12704 MacB-like periplasmic core domain DS748_RS00300 PF00270 DEAD/DEAH box helicase DS748_RS00300 PF02559 CarD-like/TRCF domain DS748_RS00300 PF03461 TRCF domain DS748_RS00300 PF00271 Helicase conserved C-terminal domain DS748_RS00300 PF17757 UvrB interaction domain DS748_RS00310 PF07338 Protein of unknown function (DUF1471) DS748_RS00315 PF00440 Bacterial regulatory proteins, tetR family DS748_RS00320 PF05433 Glycine zipper 2TM domain DS748_RS00325 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS00330 PF05728 Uncharacterised protein family (UPF0227) DS748_RS00335 PF00933 Glycosyl hydrolase family 3 N terminal domain DS748_RS00340 PF01636 Phosphotransferase enzyme family DS748_RS00345 PF13036 Peptidoglycan-synthase activator LpoB DS748_RS00350 PF07233 Protein of unknown function (DUF1425) DS748_RS00355 PF01230 HIT domain DS748_RS00365 PF00367 phosphotransferase system, EIIB DS748_RS00365 PF02378 Phosphotransferase system, EIIC DS748_RS00370 PF01026 TatD related DNase DS748_RS00375 PF09115 DNA polymerase III, delta subunit, C terminal DS748_RS00380 PF02223 Thymidylate kinase DS748_RS00385 PF02618 YceG-like family DS748_RS00390 PF01063 Amino-transferase class IV DS748_RS00395 PF00109 Beta-ketoacyl synthase, N-terminal domain DS748_RS00395 PF02801 Beta-ketoacyl synthase, C-terminal domain DS748_RS00400 PF00550 Phosphopantetheine attachment site DS748_RS00410 PF00698 Acyl transferase domain DS748_RS00415 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DS748_RS00415 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DS748_RS00420 PF02504 Fatty acid synthesis protein DS748_RS00425 PF01783 Ribosomal L32p protein family DS748_RS00430 PF02620 Large ribosomal RNA subunit accumulation protein YceD DS748_RS00435 PF02545 Maf-like protein DS748_RS00440 PF01479 S4 domain DS748_RS00440 PF00849 RNA pseudouridylate synthase DS748_RS00450 PF10150 Ribonuclease E/G family DS748_RS00450 PF00575 S1 RNA binding domain DS748_RS00450 PF12111 Polyribonucleotide phosphorylase C terminal DS748_RS00465 PF01797 Transposase IS200 like DS748_RS00475 PF00669 Bacterial flagellin N-terminal helical region DS748_RS00480 PF00460 Flagella basal body rod protein DS748_RS00480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DS748_RS00485 PF10135 Rod binding protein DS748_RS00485 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DS748_RS00490 PF02119 Flagellar P-ring protein DS748_RS00495 PF02107 Flagellar L-ring protein DS748_RS00500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DS748_RS00500 PF00460 Flagella basal body rod protein DS748_RS00505 PF00460 Flagella basal body rod protein DS748_RS00505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DS748_RS00510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DS748_RS00510 PF00460 Flagella basal body rod protein DS748_RS00510 PF07559 Flagellar basal body protein FlaE DS748_RS00515 PF13861 FlgD Tudor-like domain DS748_RS00515 PF13860 FlgD Ig-like domain DS748_RS00515 PF03963 Flagellar hook capping protein - N-terminal region DS748_RS00520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DS748_RS00520 PF00460 Flagella basal body rod protein DS748_RS00525 PF00460 Flagella basal body rod protein DS748_RS00535 PF13144 Chaperone for flagella basal body P-ring formation DS748_RS00540 PF04316 Anti-sigma-28 factor, FlgM DS748_RS00545 PF05130 FlgN protein DS748_RS00550 PF03023 Lipid II flippase MurJ DS748_RS00555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DS748_RS00560 PF04337 Protein of unknown function, DUF480 DS748_RS00565 PF13302 Acetyltransferase (GNAT) domain DS748_RS00570 PF07690 Major Facilitator Superfamily DS748_RS00575 PF13417 Glutathione S-transferase, N-terminal domain DS748_RS00575 PF04399 Glutaredoxin 2, C terminal domain DS748_RS00580 PF07273 Protein of unknown function (DUF1439) DS748_RS00585 PF01979 Amidohydrolase family DS748_RS00590 PF06183 DinI-like family DS748_RS00595 PF13991 BssS protein family DS748_RS00600 PF01266 FAD dependent oxidoreductase DS748_RS00605 PF10968 Protein of unknown function (DUF2770) DS748_RS00615 PF04264 YceI-like domain DS748_RS00620 PF00581 Rhodanese-like domain DS748_RS00620 PF12368 Rhodanase C-terminal DS748_RS00620 PF17773 UPF0176 acylphosphatase like domain DS748_RS00625 PF03279 Bacterial lipid A biosynthesis acyltransferase DS748_RS00635 PF07690 Major Facilitator Superfamily DS748_RS00640 PF13984 MsyB protein DS748_RS00645 PF07119 Protein of unknown function (DUF1375) DS748_RS00650 PF00535 Glycosyl transferase family 2 DS748_RS00655 PF04349 Periplasmic glucan biosynthesis protein, MdoG DS748_RS00665 PF01757 Acyltransferase family DS748_RS00670 PF13091 PLD-like domain DS748_RS00675 PF01661 Macro domain DS748_RS00685 PF10610 Thin aggregative fimbriae synthesis protein DS748_RS00690 PF07012 Curlin associated repeat DS748_RS00695 PF07012 Curlin associated repeat DS748_RS00700 PF00196 Bacterial regulatory proteins, luxR family DS748_RS00705 PF10627 Curli assembly protein CsgE DS748_RS00710 PF10614 Type VIII secretion system (T8SS), CsgF protein DS748_RS00715 PF03783 Curli production assembly/transport component CsgG DS748_RS00720 PF06496 Protein of unknown function (DUF1097) DS748_RS00730 PF02613 Nitrate reductase delta subunit DS748_RS00735 PF02811 PHP domain DS748_RS00740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS748_RS00760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DS748_RS00760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DS748_RS00765 PF07690 Major Facilitator Superfamily DS748_RS00770 PF06178 Oligogalacturonate-specific porin protein (KdgM) DS748_RS00775 PF01344 Kelch motif DS748_RS00780 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DS748_RS00790 PF01380 SIS domain DS748_RS00790 PF01418 Helix-turn-helix domain, rpiR family DS748_RS00795 PF02562 PhoH-like protein DS748_RS00805 PF00474 Sodium:solute symporter family DS748_RS00810 PF00171 Aldehyde dehydrogenase family DS748_RS00810 PF01619 Proline dehydrogenase DS748_RS00810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DS748_RS00810 PF14850 DNA-binding domain of Proline dehydrogenase DS748_RS00820 PF08362 YcdC-like protein, C-terminal region DS748_RS00820 PF00440 Bacterial regulatory proteins, tetR family DS748_RS00825 PF10685 Stress-induced bacterial acidophilic repeat motif DS748_RS00830 PF03358 NADPH-dependent FMN reductase DS748_RS00835 PF13993 YccJ-like protein DS748_RS00840 PF00328 Histidine phosphatase superfamily (branch 2) DS748_RS00845 PF00578 AhpC/TSA family DS748_RS00850 PF13462 Thioredoxin DS748_RS00850 PF06965 Na+/H+ antiporter 1 DS748_RS00855 PF13098 Thioredoxin-like domain DS748_RS00855 PF02683 Cytochrome C biogenesis protein transmembrane region DS748_RS00855 PF11412 Disulphide bond corrector protein DsbC DS748_RS00870 PF01556 DnaJ C terminal domain DS748_RS00870 PF00226 DnaJ domain DS748_RS00890 PF12706 Beta-lactamase superfamily domain DS748_RS00900 PF07690 Major Facilitator Superfamily DS748_RS00905 PF03328 HpcH/HpaI aldolase/citrate lyase family DS748_RS00910 PF01557 Fumarylacetoacetate (FAA) hydrolase family DS748_RS00915 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase DS748_RS00920 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DS748_RS00930 PF01557 Fumarylacetoacetate (FAA) hydrolase family DS748_RS00935 PF01047 MarR family DS748_RS00945 PF01613 Flavin reductase like domain DS748_RS00955 PF00576 HIUase/Transthyretin family DS748_RS00960 PF00072 Response regulator receiver domain DS748_RS00960 PF00486 Transcriptional regulatory protein, C terminal DS748_RS00965 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS00970 PF03577 Peptidase family C69 DS748_RS00980 PF13132 Domain of unknown function (DUF3950) DS748_RS00985 PF05925 Enterobacterial virulence protein IpgD DS748_RS00990 PF07824 Type III secretion chaperone domain DS748_RS01000 PF00805 Pentapeptide repeats (8 copies) DS748_RS01025 PF01027 Inhibitor of apoptosis-promoting Bax1 DS748_RS01030 PF04358 DsrC like protein DS748_RS01035 PF00708 Acylphosphatase DS748_RS01065 PF10672 S-adenosylmethionine-dependent methyltransferase DS748_RS01065 PF17785 PUA-like domain DS748_RS01070 PF08755 Hemimethylated DNA-binding protein YccV like DS748_RS01075 PF13380 CoA binding domain DS748_RS01080 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DS748_RS01085 PF02142 MGS-like domain DS748_RS01090 PF12462 DNA helicase IV / RNA helicase N terminal DS748_RS01090 PF00580 UvrD/REP helicase N-terminal domain DS748_RS01090 PF13361 UvrD-like helicase C-terminal domain DS748_RS01095 PF03733 Inner membrane component domain DS748_RS01100 PF12805 FUSC-like inner membrane protein yccS DS748_RS01105 PF04993 TfoX N-terminal domain DS748_RS01105 PF04994 TfoX C-terminal domain DS748_RS01110 PF03846 Cell division inhibitor SulA DS748_RS01115 PF01389 OmpA-like transmembrane domain DS748_RS01115 PF00691 OmpA family DS748_RS01120 PF06303 MatP N-terminal domain DS748_RS01120 PF17414 MatP C-terminal ribbon-helix-helix domain DS748_RS01125 PF13654 AAA domain DS748_RS01125 PF05362 Lon protease (S16) C-terminal proteolytic domain DS748_RS01130 PF07977 FabA-like domain DS748_RS01135 PF04957 Ribosome modulation factor DS748_RS01140 PF03886 ABC-type transport auxiliary lipoprotein component DS748_RS01145 PF02470 MlaD protein DS748_RS01150 PF04403 Paraquat-inducible protein A DS748_RS01155 PF00005 ABC transporter DS748_RS01155 PF16326 ABC transporter C-terminal domain DS748_RS01155 PF12848 ABC transporter DS748_RS01160 PF10672 S-adenosylmethionine-dependent methyltransferase DS748_RS01160 PF02926 THUMP domain DS748_RS01160 PF01170 Putative RNA methylase family UPF0020 DS748_RS01165 PF03473 MOSC domain DS748_RS01165 PF03476 MOSC N-terminal beta barrel domain DS748_RS01165 PF00111 2Fe-2S iron-sulfur cluster binding domain DS748_RS01170 PF07126 Cell-division protein ZapC DS748_RS01175 PF01180 Dihydroorotate dehydrogenase DS748_RS01180 PF01433 Peptidase family M1 domain DS748_RS01180 PF11940 Domain of unknown function (DUF3458) Ig-like fold DS748_RS01180 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DS748_RS01185 PF06183 DinI-like family DS748_RS01340 PF04466 Phage terminase large subunit DS748_RS01340 PF17288 Terminase RNAseH like domain DS748_RS01360 PF10721 Protein of unknown function (DUF2514) DS748_RS01365 PF00182 Chitinase class I DS748_RS01390 PF03589 Antitermination protein DS748_RS01420 PF06183 DinI-like family DS748_RS01465 PF01695 IstB-like ATP binding protein DS748_RS01485 PF01381 Helix-turn-helix DS748_RS01485 PF00717 Peptidase S24-like DS748_RS01515 PF02086 D12 class N6 adenine-specific DNA methyltransferase DS748_RS01530 PF12167 Arm DNA-binding domain DS748_RS01530 PF00589 Phage integrase family DS748_RS01535 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DS748_RS01535 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DS748_RS01540 PF01235 Sodium:alanine symporter family DS748_RS01555 PF13404 AsnC-type helix-turn-helix domain DS748_RS01555 PF01037 Lrp/AsnC ligand binding domain DS748_RS01560 PF00152 tRNA synthetases class II (D, K and N) DS748_RS01560 PF01336 OB-fold nucleic acid binding domain DS748_RS01565 PF00267 Gram-negative porin DS748_RS01570 PF00155 Aminotransferase class I and II DS748_RS01575 PF00753 Metallo-beta-lactamase superfamily DS748_RS01580 PF05951 Bacterial protein of unknown function (DUF882) DS748_RS01585 PF01471 Putative peptidoglycan binding domain DS748_RS01585 PF03734 L,D-transpeptidase catalytic domain DS748_RS01590 PF04310 MukB N-terminal DS748_RS01590 PF16330 MukB hinge domain DS748_RS01595 PF04288 MukE-like family DS748_RS01600 PF17193 MukF C-terminal domain DS748_RS01600 PF17192 MukF middle domain DS748_RS01600 PF03882 MukF winged-helix domain DS748_RS01605 PF13847 Methyltransferase domain DS748_RS01610 PF02698 DUF218 domain DS748_RS01615 PF01636 Phosphotransferase enzyme family DS748_RS01620 PF02348 Cytidylyltransferase DS748_RS01625 PF03966 Trm112p-like protein DS748_RS01635 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DS748_RS01640 PF00005 ABC transporter DS748_RS01640 PF00664 ABC transporter transmembrane region DS748_RS01645 PF03772 Competence protein DS748_RS01645 PF00753 Metallo-beta-lactamase superfamily DS748_RS01650 PF00216 Bacterial DNA-binding protein DS748_RS01655 PF00575 S1 RNA binding domain DS748_RS01660 PF02224 Cytidylate kinase DS748_RS01665 PF01435 Peptidase family M48 DS748_RS01670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DS748_RS01675 PF00266 Aminotransferase class-V DS748_RS01680 PF04239 Protein of unknown function (DUF421) DS748_RS01685 PF18381 YcaO cyclodehydratase C-terminal domain DS748_RS01685 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DS748_RS01690 PF01226 Formate/nitrite transporter DS748_RS01695 PF02901 Pyruvate formate lyase-like DS748_RS01695 PF01228 Glycine radical DS748_RS01710 PF04055 Radical SAM superfamily DS748_RS01715 PF13520 Amino acid permease DS748_RS01720 PF07690 Major Facilitator Superfamily DS748_RS01725 PF04976 DMSO reductase anchor subunit (DmsC) DS748_RS01730 PF13247 4Fe-4S dicluster domain DS748_RS01730 PF12800 4Fe-4S binding domain DS748_RS01735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DS748_RS01735 PF00384 Molybdopterin oxidoreductase DS748_RS01735 PF01568 Molydopterin dinucleotide binding domain DS748_RS01740 PF02403 Seryl-tRNA synthetase N-terminal domain DS748_RS01740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DS748_RS01745 PF12002 MgsA AAA+ ATPase C terminal DS748_RS01745 PF00004 ATPase family associated with various cellular activities (AAA) DS748_RS01745 PF16193 AAA C-terminal domain DS748_RS01750 PF03548 Outer membrane lipoprotein carrier protein LolA DS748_RS01755 PF17854 FtsK alpha domain DS748_RS01755 PF09397 Ftsk gamma domain DS748_RS01755 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DS748_RS01755 PF01580 FtsK/SpoIIIE family DS748_RS01760 PF01037 Lrp/AsnC ligand binding domain DS748_RS01765 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS01770 PF00005 ABC transporter DS748_RS01770 PF00664 ABC transporter transmembrane region DS748_RS01775 PF00005 ABC transporter DS748_RS01775 PF00664 ABC transporter transmembrane region DS748_RS01780 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DS748_RS01790 PF01176 Translation initiation factor 1A / IF-1 DS748_RS01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS01795 PF03466 LysR substrate binding domain DS748_RS01800 PF02678 Pirin DS748_RS01800 PF05726 Pirin C-terminal cupin domain DS748_RS01805 PF00857 Isochorismatase family DS748_RS01825 PF00004 ATPase family associated with various cellular activities (AAA) DS748_RS01825 PF10431 C-terminal, D2-small domain, of ClpB protein DS748_RS01825 PF07724 AAA domain (Cdc48 subfamily) DS748_RS01825 PF02861 Clp amino terminal domain, pathogenicity island component DS748_RS01825 PF17871 AAA lid domain DS748_RS01830 PF02617 ATP-dependent Clp protease adaptor protein ClpS DS748_RS01835 PF00313 'Cold-shock' DNA-binding domain DS748_RS01840 PF12704 MacB-like periplasmic core domain DS748_RS01840 PF02687 FtsX-like permease family DS748_RS01840 PF00005 ABC transporter DS748_RS01845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS748_RS01850 PF04393 Protein of unknown function (DUF535) DS748_RS01855 PF11398 Protein of unknown function (DUF2813) DS748_RS01860 PF03956 Lysine exporter LysO DS748_RS01865 PF03063 Prismane/CO dehydrogenase family DS748_RS01870 PF00111 2Fe-2S iron-sulfur cluster binding domain DS748_RS01870 PF00970 Oxidoreductase FAD-binding domain DS748_RS01870 PF00175 Oxidoreductase NAD-binding domain DS748_RS01875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS748_RS01875 PF00205 Thiamine pyrophosphate enzyme, central domain DS748_RS01875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DS748_RS01880 PF01212 Beta-eliminating lyase DS748_RS01885 PF13460 NAD(P)H-binding DS748_RS01885 PF11066 Protein of unknown function (DUF2867) DS748_RS01890 PF01370 NAD dependent epimerase/dehydratase family DS748_RS01895 PF01510 N-acetylmuramoyl-L-alanine amidase DS748_RS01900 PF01906 Putative heavy-metal-binding DS748_RS01905 PF12883 Protein of unknown function (DUF3828) DS748_RS01910 PF00005 ABC transporter DS748_RS01915 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS748_RS01920 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS01925 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS01930 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS748_RS01945 PF03611 PTS system sugar-specific permease component DS748_RS01955 PF05958 tRNA (Uracil-5-)-methyltransferase DS748_RS01960 PF10767 Protein of unknown function (DUF2593) DS748_RS01965 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS01975 PF08402 TOBE domain DS748_RS01975 PF00005 ABC transporter DS748_RS01980 PF13416 Bacterial extracellular solute-binding protein DS748_RS01985 PF10722 Putative bacterial sensory transduction regulator DS748_RS01990 PF08443 RimK-like ATP-grasp domain DS748_RS01990 PF18030 RimK PreATP-grasp domain DS748_RS01995 PF00881 Nitroreductase family DS748_RS02000 PF07214 Protein of unknown function (DUF1418) DS748_RS02005 PF00462 Glutaredoxin DS748_RS02010 PF11045 Putative inner membrane protein of Enterobacteriaceae DS748_RS02015 PF06826 Predicted Permease Membrane Region DS748_RS02015 PF02080 TrkA-C domain DS748_RS02025 PF00440 Bacterial regulatory proteins, tetR family DS748_RS02030 PF07690 Major Facilitator Superfamily DS748_RS02040 PF07690 Major Facilitator Superfamily DS748_RS02045 PF01569 PAP2 superfamily DS748_RS02050 PF08220 DeoR-like helix-turn-helix domain DS748_RS02050 PF00455 DeoR C terminal sensor domain DS748_RS02055 PF07943 Penicillin-binding protein 5, C-terminal domain DS748_RS02055 PF00768 D-alanyl-D-alanine carboxypeptidase DS748_RS02060 PF00043 Glutathione S-transferase, C-terminal domain DS748_RS02060 PF13417 Glutathione S-transferase, N-terminal domain DS748_RS02065 PF07995 Glucose / Sorbosone dehydrogenase DS748_RS02070 PF10799 Biofilm formation protein (YliH/bssR) DS748_RS02075 PF04055 Radical SAM superfamily DS748_RS02075 PF00919 Uncharacterized protein family UPF0004 DS748_RS02075 PF18693 TRAM domain DS748_RS02080 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS02080 PF12911 N-terminal TM domain of oligopeptide transport permease C DS748_RS02085 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS02090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS748_RS02095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DS748_RS02095 PF00005 ABC transporter DS748_RS02100 PF01112 Asparaginase DS748_RS02105 PF00994 Probable molybdopterin binding domain DS748_RS02105 PF03454 MoeA C-terminal region (domain IV) DS748_RS02105 PF03453 MoeA N-terminal region (domain I and II) DS748_RS02110 PF00899 ThiF family DS748_RS02115 PF04055 Radical SAM superfamily DS748_RS02120 PF02901 Pyruvate formate lyase-like DS748_RS02120 PF01228 Glycine radical DS748_RS02130 PF07350 Protein of unknown function (DUF1479) DS748_RS02135 PF00005 ABC transporter DS748_RS02135 PF12848 ABC transporter DS748_RS02140 PF17969 L,D-transpeptidase C-terminal domain DS748_RS02140 PF03734 L,D-transpeptidase catalytic domain DS748_RS02145 PF03600 Citrate transporter DS748_RS02150 PF02742 Iron dependent repressor, metal binding and dimerisation domain DS748_RS02150 PF01325 Iron dependent repressor, N-terminal DNA binding domain DS748_RS02160 PF00884 Sulfatase DS748_RS02175 PF13505 Outer membrane protein beta-barrel domain DS748_RS02180 PF00892 EamA-like transporter family DS748_RS02185 PF00210 Ferritin-like domain DS748_RS02190 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS748_RS02195 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS02200 PF00005 ABC transporter DS748_RS02205 PF00924 Mechanosensitive ion channel DS748_RS02215 PF01258 Prokaryotic dksA/traR C4-type zinc finger DS748_RS02220 PF07338 Protein of unknown function (DUF1471) DS748_RS02235 PF00270 DEAD/DEAH box helicase DS748_RS02235 PF00271 Helicase conserved C-terminal domain DS748_RS02240 PF09209 Tetracyclin repressor-like, C-terminal domain DS748_RS02240 PF00440 Bacterial regulatory proteins, tetR family DS748_RS02245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS748_RS02250 PF00005 ABC transporter DS748_RS02265 PF11076 Putative inner membrane protein YbhQ DS748_RS02270 PF03372 Endonuclease/Exonuclease/phosphatase family DS748_RS02275 PF13091 PLD-like domain DS748_RS02280 PF03706 Lysylphosphatidylglycerol synthase TM region DS748_RS02305 PF02391 MoaE protein DS748_RS02310 PF02597 ThiS family DS748_RS02315 PF01967 MoaC family DS748_RS02320 PF00994 Probable molybdopterin binding domain DS748_RS02325 PF04055 Radical SAM superfamily DS748_RS02325 PF06463 Molybdenum Cofactor Synthesis C DS748_RS02330 PF01933 Uncharacterised protein family UPF0052 DS748_RS02345 PF17757 UvrB interaction domain DS748_RS02345 PF00271 Helicase conserved C-terminal domain DS748_RS02345 PF12344 Ultra-violet resistance protein B DS748_RS02345 PF02151 UvrB/uvrC motif DS748_RS02345 PF04851 Type III restriction enzyme, res subunit DS748_RS02360 PF08241 Methyltransferase domain DS748_RS02365 PF00155 Aminotransferase class I and II DS748_RS02370 PF04055 Radical SAM superfamily DS748_RS02370 PF06968 Biotin and Thiamin Synthesis associated domain DS748_RS02375 PF00202 Aminotransferase class-III DS748_RS02380 PF01161 Phosphatidylethanolamine-binding protein DS748_RS02385 PF00221 Aromatic amino acid lyase DS748_RS02390 PF17391 Urocanase N-terminal domain DS748_RS02390 PF01175 Urocanase Rossmann-like domain DS748_RS02390 PF17392 Urocanase C-terminal domain DS748_RS02395 PF00392 Bacterial regulatory proteins, gntR family DS748_RS02395 PF07702 UTRA domain DS748_RS02400 PF00491 Arginase family DS748_RS02405 PF01979 Amidohydrolase family DS748_RS02410 PF01095 Pectinesterase DS748_RS02415 PF10282 Lactonase, 7-bladed beta-propeller DS748_RS02425 PF00005 ABC transporter DS748_RS02425 PF03459 TOBE domain DS748_RS02430 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS02440 PF10766 Multidrug efflux pump-associated protein AcrZ DS748_RS02445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS02445 PF03459 TOBE domain DS748_RS02450 PF00005 ABC transporter DS748_RS02460 PF16363 GDP-mannose 4,6 dehydratase DS748_RS02465 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DS748_RS02465 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DS748_RS02470 PF00288 GHMP kinases N terminal domain DS748_RS02470 PF08544 GHMP kinases C terminal DS748_RS02470 PF10509 Galactokinase galactose-binding signature DS748_RS02475 PF01263 Aldose 1-epimerase DS748_RS02480 PF00300 Histidine phosphatase superfamily (branch 1) DS748_RS02485 PF00005 ABC transporter DS748_RS02490 PF01032 FecCD transport family DS748_RS02495 PF00793 DAHP synthetase I family DS748_RS02500 PF13985 YbgS-like protein DS748_RS02505 PF01545 Cation efflux family DS748_RS02510 PF04973 Nicotinamide mononucleotide transporter DS748_RS02515 PF02445 Quinolinate synthetase A protein DS748_RS02535 PF16331 TolA binding protein trimerisation DS748_RS02535 PF13174 Tetratricopeptide repeat DS748_RS02540 PF00691 OmpA family DS748_RS02545 PF07676 WD40-like Beta Propeller Repeat DS748_RS02545 PF04052 TolB amino-terminal domain DS748_RS02550 PF06519 TolA C-terminal DS748_RS02555 PF02472 Biopolymer transport protein ExbD/TolR DS748_RS02560 PF01618 MotA/TolQ/ExbB proton channel family DS748_RS02565 PF03061 Thioesterase superfamily DS748_RS02570 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) DS748_RS02575 PF08173 Membrane bound YbgT-like protein DS748_RS02580 PF02322 Cytochrome bd terminal oxidase subunit II DS748_RS02585 PF01654 Cytochrome bd terminal oxidase subunit I DS748_RS02590 PF00549 CoA-ligase DS748_RS02590 PF02629 CoA binding domain DS748_RS02595 PF08442 ATP-grasp domain DS748_RS02595 PF00549 CoA-ligase DS748_RS02600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DS748_RS02600 PF02817 e3 binding domain DS748_RS02600 PF00364 Biotin-requiring enzyme DS748_RS02605 PF16870 2-oxoglutarate dehydrogenase C-terminal DS748_RS02605 PF16078 2-oxoglutarate dehydrogenase N-terminus DS748_RS02605 PF02779 Transketolase, pyrimidine binding domain DS748_RS02605 PF00676 Dehydrogenase E1 component DS748_RS02610 PF13085 2Fe-2S iron-sulfur cluster binding domain DS748_RS02615 PF02910 Fumarate reductase flavoprotein C-term DS748_RS02615 PF00890 FAD binding domain DS748_RS02620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DS748_RS02625 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DS748_RS02630 PF00285 Citrate synthase, C-terminal domain DS748_RS02635 PF05145 Transition state regulatory protein AbrB DS748_RS02640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DS748_RS02640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DS748_RS02640 PF06827 Zinc finger found in FPG and IleRS DS748_RS02665 PF00005 ABC transporter DS748_RS02685 PF03275 UDP-galactopyranose mutase DS748_RS02700 PF00589 Phage integrase family DS748_RS02710 PF03746 LamB/YcsF family DS748_RS02715 PF02626 Carboxyltransferase domain, subdomain A and B DS748_RS02720 PF02682 Carboxyltransferase domain, subdomain C and D DS748_RS02725 PF01784 NIF3 (NGG1p interacting factor 3) DS748_RS02735 PF00854 POT family DS748_RS02740 PF00875 DNA photolyase DS748_RS02740 PF03441 FAD binding domain of DNA photolyase DS748_RS02745 PF10725 Protein of unknown function (DUF2517) DS748_RS02750 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) DS748_RS02755 PF03814 Potassium-transporting ATPase A subunit DS748_RS02765 PF02669 K+-transporting ATPase, c chain DS748_RS02770 PF13493 Domain of unknown function (DUF4118) DS748_RS02770 PF02702 Osmosensitive K+ channel His kinase sensor domain DS748_RS02770 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS02770 PF13492 GAF domain DS748_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS02775 PF00072 Response regulator receiver domain DS748_RS02775 PF00486 Transcriptional regulatory protein, C terminal DS748_RS02790 PF13520 Amino acid permease DS748_RS02800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DS748_RS02800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DS748_RS02800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DS748_RS02800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DS748_RS02805 PF17206 SeqA protein N-terminal domain DS748_RS02805 PF03925 SeqA protein C-terminal domain DS748_RS02810 PF12697 Alpha/beta hydrolase family DS748_RS02815 PF01402 Ribbon-helix-helix protein, copG family DS748_RS02820 PF00258 Flavodoxin DS748_RS02825 PF01475 Ferric uptake regulator family DS748_RS02830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS02830 PF03466 LysR substrate binding domain DS748_RS02835 PF14537 Cytochrome c3 DS748_RS02835 PF00890 FAD binding domain DS748_RS02845 PF07690 Major Facilitator Superfamily DS748_RS02850 PF13982 YbfN-like lipoprotein DS748_RS02855 PF03573 outer membrane porin, OprD family DS748_RS02860 PF00749 tRNA synthetases class I (E and Q), catalytic domain DS748_RS02860 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DS748_RS02865 PF00367 phosphotransferase system, EIIB DS748_RS02865 PF02378 Phosphotransferase system, EIIC DS748_RS02865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DS748_RS02870 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DS748_RS02875 PF01979 Amidohydrolase family DS748_RS02880 PF01047 MarR family DS748_RS02880 PF00480 ROK family DS748_RS02885 PF13344 Haloacid dehalogenase-like hydrolase DS748_RS02895 PF13537 Glutamine amidotransferase domain DS748_RS02895 PF00733 Asparagine synthase DS748_RS02930 PF01494 FAD binding domain DS748_RS02935 PF00919 Uncharacterized protein family UPF0004 DS748_RS02935 PF01938 TRAM domain DS748_RS02935 PF04055 Radical SAM superfamily DS748_RS02940 PF02562 PhoH-like protein DS748_RS02945 PF02130 Uncharacterized protein family UPF0054 DS748_RS02950 PF00571 CBS domain DS748_RS02950 PF03471 Transporter associated domain DS748_RS02955 PF00795 Carbon-nitrogen hydrolase DS748_RS02960 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS748_RS02965 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS02970 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS02975 PF00005 ABC transporter DS748_RS02980 PF01156 Inosine-uridine preferring nucleoside hydrolase DS748_RS02990 PF07295 Zinc-ribbon containing domain DS748_RS02995 PF00158 Sigma-54 interaction domain DS748_RS02995 PF00989 PAS fold DS748_RS02995 PF02954 Bacterial regulatory protein, Fis family DS748_RS03000 PF03812 2-keto-3-deoxygluconate permease DS748_RS03005 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DS748_RS03015 PF08264 Anticodon-binding domain of tRNA DS748_RS03015 PF00133 tRNA synthetases class I (I, L, M and V) DS748_RS03015 PF13603 Leucyl-tRNA synthetase, Domain 2 DS748_RS03020 PF04390 Lipopolysaccharide-assembly DS748_RS03025 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DS748_RS03025 PF06144 DNA polymerase III, delta subunit DS748_RS03030 PF01467 Cytidylyltransferase-like DS748_RS03035 PF00155 Aminotransferase class I and II DS748_RS03040 PF00300 Histidine phosphatase superfamily (branch 1) DS748_RS03050 PF02590 Predicted SPOUT methyltransferase DS748_RS03055 PF03717 Penicillin-binding Protein dimerisation domain DS748_RS03055 PF00905 Penicillin binding protein transpeptidase domain DS748_RS03060 PF01098 Cell cycle protein DS748_RS03065 PF03330 Lytic transglycolase DS748_RS03065 PF05036 Sporulation related domain DS748_RS03070 PF07943 Penicillin-binding protein 5, C-terminal domain DS748_RS03070 PF00768 D-alanyl-D-alanine carboxypeptidase DS748_RS03075 PF04359 Protein of unknown function (DUF493) DS748_RS03080 PF03099 Biotin/lipoate A/B protein ligase family DS748_RS03085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS03085 PF03466 LysR substrate binding domain DS748_RS03090 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DS748_RS03090 PF04055 Radical SAM superfamily DS748_RS03095 PF02416 mttA/Hcf106 family DS748_RS03105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DS748_RS03110 PF00313 'Cold-shock' DNA-binding domain DS748_RS03115 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP DS748_RS03120 PF03606 C4-dicarboxylate anaerobic carrier DS748_RS03125 PF12431 Transcriptional regulator DS748_RS03125 PF00072 Response regulator receiver domain DS748_RS03130 PF17203 Single cache domain 3 DS748_RS03130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS03130 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DS748_RS03130 PF00989 PAS fold DS748_RS03135 PF08218 Citrate lyase ligase C-terminal domain DS748_RS03140 PF06857 Malonate decarboxylase delta subunit (MdcD) DS748_RS03145 PF03328 HpcH/HpaI aldolase/citrate lyase family DS748_RS03150 PF04223 Citrate lyase, alpha subunit (CitF) DS748_RS03155 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DS748_RS03160 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DS748_RS03165 PF00939 Sodium:sulfate symporter transmembrane region DS748_RS03170 PF00445 Ribonuclease T2 family DS748_RS03175 PF14760 Rnk N-terminus DS748_RS03175 PF01272 Transcription elongation factor, GreA/GreB, C-term DS748_RS03180 PF08240 Alcohol dehydrogenase GroES-like domain DS748_RS03180 PF13823 Alcohol dehydrogenase GroES-associated DS748_RS03180 PF00107 Zinc-binding dehydrogenase DS748_RS03185 PF00582 Universal stress protein family DS748_RS03195 PF13247 4Fe-4S dicluster domain DS748_RS03200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DS748_RS03200 PF01568 Molydopterin dinucleotide binding domain DS748_RS03200 PF00384 Molybdopterin oxidoreductase DS748_RS03210 PF01797 Transposase IS200 like DS748_RS03220 PF13192 Thioredoxin domain DS748_RS03220 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS03225 PF10417 C-terminal domain of 1-Cys peroxiredoxin DS748_RS03225 PF00578 AhpC/TSA family DS748_RS03230 PF13098 Thioredoxin-like domain DS748_RS03240 PF03466 LysR substrate binding domain DS748_RS03240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS03245 PF01507 Phosphoadenosine phosphosulfate reductase family DS748_RS03245 PF11922 Domain of unknown function (DUF3440) DS748_RS03250 PF02195 ParB-like nuclease domain DS748_RS03255 PF00155 Aminotransferase class I and II DS748_RS03260 PF00465 Iron-containing alcohol dehydrogenase DS748_RS03265 PF04328 Selenoprotein, putative DS748_RS03275 PF03061 Thioesterase superfamily DS748_RS03285 PF00857 Isochorismatase family DS748_RS03285 PF00550 Phosphopantetheine attachment site DS748_RS03290 PF13193 AMP-binding enzyme C-terminal domain DS748_RS03290 PF00501 AMP-binding enzyme DS748_RS03295 PF00425 chorismate binding enzyme DS748_RS03300 PF01497 Periplasmic binding protein DS748_RS03305 PF05977 Transmembrane secretion effector DS748_RS03310 PF01032 FecCD transport family DS748_RS03315 PF01032 FecCD transport family DS748_RS03320 PF00005 ABC transporter DS748_RS03330 PF00501 AMP-binding enzyme DS748_RS03330 PF13193 AMP-binding enzyme C-terminal domain DS748_RS03330 PF00550 Phosphopantetheine attachment site DS748_RS03330 PF00975 Thioesterase domain DS748_RS03330 PF00668 Condensation domain DS748_RS03335 PF03621 MbtH-like protein DS748_RS03340 PF11806 Domain of unknown function (DUF3327) DS748_RS03340 PF00756 Putative esterase DS748_RS03345 PF00593 TonB dependent receptor DS748_RS03345 PF07715 TonB-dependent Receptor Plug Domain DS748_RS03350 PF01648 4'-phosphopantetheinyl transferase superfamily DS748_RS03350 PF17837 4'-phosphopantetheinyl transferase N-terminal domain DS748_RS03355 PF04107 Glutamate-cysteine ligase family 2(GCS2) DS748_RS03360 PF06643 Protein of unknown function (DUF1158) DS748_RS03365 PF12833 Helix-turn-helix domain DS748_RS03370 PF00440 Bacterial regulatory proteins, tetR family DS748_RS03370 PF16295 Tetracyclin repressor-like, C-terminal domain DS748_RS03375 PF04237 YjbR DS748_RS03380 PF00881 Nitroreductase family DS748_RS03390 PF00657 GDSL-like Lipase/Acylhydrolase DS748_RS03390 PF03797 Autotransporter beta-domain DS748_RS03395 PF00924 Mechanosensitive ion channel DS748_RS03400 PF00324 Amino acid permease DS748_RS03410 PF04224 Protein of unknown function, DUF417 DS748_RS03415 PF07338 Protein of unknown function (DUF1471) DS748_RS03420 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS03420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DS748_RS03425 PF12833 Helix-turn-helix domain DS748_RS03425 PF12852 Cupin DS748_RS03445 PF04138 GtrA-like protein DS748_RS03450 PF00535 Glycosyl transferase family 2 DS748_RS03465 PF00589 Phage integrase family DS748_RS03480 PF00196 Bacterial regulatory proteins, luxR family DS748_RS03495 PF00072 Response regulator receiver domain DS748_RS03495 PF00196 Bacterial regulatory proteins, luxR family DS748_RS03500 PF00419 Fimbrial protein DS748_RS03505 PF00419 Fimbrial protein DS748_RS03510 PF13953 PapC C-terminal domain DS748_RS03510 PF00577 Outer membrane usher protein DS748_RS03510 PF13954 PapC N-terminal domain DS748_RS03515 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS03515 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS03525 PF00419 Fimbrial protein DS748_RS03535 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DS748_RS03535 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DS748_RS03545 PF04307 LexA-binding, inner membrane-associated putative hydrolase DS748_RS03550 PF09190 DALR domain DS748_RS03550 PF01406 tRNA synthetases class I (C) catalytic domain DS748_RS03555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DS748_RS03560 PF12850 Calcineurin-like phosphoesterase superfamily domain DS748_RS03565 PF00731 AIR carboxylase DS748_RS03570 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DS748_RS03570 PF02222 ATP-grasp domain DS748_RS03575 PF00696 Amino acid kinase family DS748_RS03580 PF11392 Protein of unknown function (DUF2877) DS748_RS03585 PF06545 Protein of unknown function (DUF1116) DS748_RS03590 PF00549 CoA-ligase DS748_RS03590 PF02629 CoA binding domain DS748_RS03595 PF02615 Malate/L-lactate dehydrogenase DS748_RS03600 PF01546 Peptidase family M20/M25/M40 DS748_RS03605 PF05899 Protein of unknown function (DUF861) DS748_RS03605 PF07883 Cupin domain DS748_RS03610 PF02595 Glycerate kinase family DS748_RS03615 PF00860 Permease family DS748_RS03620 PF01979 Amidohydrolase family DS748_RS03635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DS748_RS03635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DS748_RS03640 PF01261 Xylose isomerase-like TIM barrel DS748_RS03645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DS748_RS03645 PF00205 Thiamine pyrophosphate enzyme, central domain DS748_RS03645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS748_RS03650 PF09339 IclR helix-turn-helix domain DS748_RS03650 PF01614 Bacterial transcriptional regulator DS748_RS03660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS03660 PF03466 LysR substrate binding domain DS748_RS03670 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS03675 PF00005 ABC transporter DS748_RS03675 PF09383 NIL domain DS748_RS03680 PF03180 NLPA lipoprotein DS748_RS03695 PF00005 ABC transporter DS748_RS03700 PF13472 GDSL-like Lipase/Acylhydrolase family DS748_RS03705 PF00106 short chain dehydrogenase DS748_RS03710 PF00085 Thioredoxin DS748_RS03715 PF03649 Uncharacterised protein family (UPF0014) DS748_RS03720 PF00005 ABC transporter DS748_RS03725 PF16200 C-terminal region of band_7 DS748_RS03725 PF01145 SPFH domain / Band 7 family DS748_RS03730 PF01957 NfeD-like C-terminal, partner-binding DS748_RS03735 PF13411 MerR HTH family regulatory protein DS748_RS03740 PF00403 Heavy-metal-associated domain DS748_RS03750 PF01963 TraB family DS748_RS03755 PF04073 Aminoacyl-tRNA editing domain DS748_RS03760 PF00149 Calcineurin-like phosphoesterase DS748_RS03760 PF02872 5'-nucleotidase, C-terminal domain DS748_RS03765 PF02872 5'-nucleotidase, C-terminal domain DS748_RS03765 PF00149 Calcineurin-like phosphoesterase DS748_RS03770 PF07690 Major Facilitator Superfamily DS748_RS03775 PF00999 Sodium/hydrogen exchanger family DS748_RS03775 PF02254 TrkA-N domain DS748_RS03780 PF00294 pfkB family carbohydrate kinase DS748_RS03785 PF07859 alpha/beta hydrolase fold DS748_RS03790 PF00762 Ferrochelatase DS748_RS03795 PF05191 Adenylate kinase, active site lid DS748_RS03800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS03800 PF00183 Hsp90 protein DS748_RS03805 PF02132 RecR protein DS748_RS03805 PF13662 Toprim domain DS748_RS03810 PF02575 YbaB/EbfC DNA-binding family DS748_RS03815 PF12169 DNA polymerase III subunits gamma and tau domain III DS748_RS03815 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DS748_RS03815 PF12170 DNA polymerase III tau subunit V interacting with alpha DS748_RS03820 PF00156 Phosphoribosyl transferase domain DS748_RS03825 PF04304 Protein of unknown function (DUF454) DS748_RS03835 PF10689 Protein of unknown function (DUF2496) DS748_RS03840 PF04754 Putative transposase, YhgA-like DS748_RS03845 PF12794 Mechanosensitive ion channel inner membrane domain 1 DS748_RS03845 PF00924 Mechanosensitive ion channel DS748_RS03845 PF12795 Mechanosensitive ion channel porin domain DS748_RS03850 PF00440 Bacterial regulatory proteins, tetR family DS748_RS03850 PF08361 MAATS-type transcriptional repressor, C-terminal region DS748_RS03855 PF00529 HlyD membrane-fusion protein of T1SS DS748_RS03855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS748_RS03860 PF00873 AcrB/AcrD/AcrF family DS748_RS03865 PF10757 Biofilm formation regulator YbaJ DS748_RS03870 PF05321 Haemolysin expression modulating protein DS748_RS03875 PF14602 Hexapeptide repeat of succinyl-transferase DS748_RS03875 PF12464 Maltose acetyltransferase DS748_RS03880 PF10777 Inner membrane protein YlaC DS748_RS03885 PF00444 Ribosomal protein L36 DS748_RS03890 PF01197 Ribosomal protein L31 DS748_RS03895 PF00563 EAL domain DS748_RS03895 PF12792 CSS motif domain associated with EAL DS748_RS03905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DS748_RS03910 PF09619 Type III secretion system lipoprotein chaperone (YscW) DS748_RS03920 PF00909 Ammonium Transporter Family DS748_RS03925 PF00543 Nitrogen regulatory protein P-II DS748_RS03930 PF00005 ABC transporter DS748_RS03930 PF00664 ABC transporter transmembrane region DS748_RS03935 PF00664 ABC transporter transmembrane region DS748_RS03935 PF00005 ABC transporter DS748_RS03940 PF13404 AsnC-type helix-turn-helix domain DS748_RS03940 PF01037 Lrp/AsnC ligand binding domain DS748_RS03965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS748_RS03965 PF12793 Sugar transport-related sRNA regulator N-term DS748_RS03970 PF06508 Queuosine biosynthesis protein QueC DS748_RS03985 PF13145 PPIC-type PPIASE domain DS748_RS03990 PF00216 Bacterial DNA-binding protein DS748_RS03995 PF00004 ATPase family associated with various cellular activities (AAA) DS748_RS03995 PF05362 Lon protease (S16) C-terminal proteolytic domain DS748_RS03995 PF02190 ATP-dependent protease La (LON) substrate-binding domain DS748_RS04000 PF10431 C-terminal, D2-small domain, of ClpB protein DS748_RS04000 PF07724 AAA domain (Cdc48 subfamily) DS748_RS04000 PF06689 ClpX C4-type zinc finger DS748_RS04005 PF00574 Clp protease DS748_RS04010 PF05698 Bacterial trigger factor protein (TF) C-terminus DS748_RS04010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS748_RS04010 PF05697 Bacterial trigger factor protein (TF) DS748_RS04020 PF01722 BolA-like protein DS748_RS04025 PF03923 Uncharacterized lipoprotein DS748_RS04025 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DS748_RS04030 PF07690 Major Facilitator Superfamily DS748_RS04035 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DS748_RS04035 PF06481 COX Aromatic Rich Motif DS748_RS04040 PF00115 Cytochrome C and Quinol oxidase polypeptide I DS748_RS04045 PF00510 Cytochrome c oxidase subunit III DS748_RS04050 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DS748_RS04055 PF01040 UbiA prenyltransferase family DS748_RS04080 PF07690 Major Facilitator Superfamily DS748_RS04085 PF04461 Protein of unknown function (DUF520) DS748_RS04090 PF08546 Ketopantoate reductase PanE/ApbA C terminal DS748_RS04090 PF02558 Ketopantoate reductase PanE/ApbA DS748_RS04095 PF01965 DJ-1/PfpI family DS748_RS04105 PF00266 Aminotransferase class-V DS748_RS04110 PF00392 Bacterial regulatory proteins, gntR family DS748_RS04110 PF07702 UTRA domain DS748_RS04115 PF01547 Bacterial extracellular solute-binding protein DS748_RS04120 PF00005 ABC transporter DS748_RS04120 PF08402 TOBE domain DS748_RS04125 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS04130 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS04135 PF02568 Thiamine biosynthesis protein (ThiI) DS748_RS04135 PF02926 THUMP domain DS748_RS04140 PF02609 Exonuclease VII small subunit DS748_RS04145 PF00348 Polyprenyl synthetase DS748_RS04150 PF02780 Transketolase, C-terminal domain DS748_RS04150 PF02779 Transketolase, pyrimidine binding domain DS748_RS04150 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DS748_RS04155 PF00248 Aldo/keto reductase family DS748_RS04160 PF04608 Phosphatidylglycerophosphatase A DS748_RS04165 PF02769 AIR synthase related protein, C-terminal domain DS748_RS04165 PF00586 AIR synthase related protein, N-terminal domain DS748_RS04170 PF01029 NusB family DS748_RS04175 PF00885 6,7-dimethyl-8-ribityllumazine synthase DS748_RS04180 PF01872 RibD C-terminal domain DS748_RS04180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DS748_RS04185 PF03477 ATP cone domain DS748_RS04190 PF11622 Protein of unknown function (DUF3251) DS748_RS04195 PF03502 Nucleoside-specific channel-forming protein, Tsx DS748_RS04210 PF01844 HNH endonuclease DS748_RS04225 PF02355 Protein export membrane protein DS748_RS04225 PF07549 SecD/SecF GG Motif DS748_RS04230 PF13721 SecD export protein N-terminal TM region DS748_RS04230 PF07549 SecD/SecF GG Motif DS748_RS04230 PF02355 Protein export membrane protein DS748_RS04235 PF02699 Preprotein translocase subunit DS748_RS04240 PF01702 Queuine tRNA-ribosyltransferase DS748_RS04245 PF02547 Queuosine biosynthesis protein DS748_RS04250 PF04336 Acyl carrier protein phosphodiesterase DS748_RS04255 PF10417 C-terminal domain of 1-Cys peroxiredoxin DS748_RS04255 PF00578 AhpC/TSA family DS748_RS04260 PF00128 Alpha amylase, catalytic domain DS748_RS04260 PF02903 Alpha amylase, N-terminal ig-like domain DS748_RS04265 PF00324 Amino acid permease DS748_RS04270 PF01797 Transposase IS200 like DS748_RS04280 PF05525 Branched-chain amino acid transport protein DS748_RS04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS04285 PF11808 Phosphate regulon sensor protein PhoR DS748_RS04285 PF00989 PAS fold DS748_RS04285 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS04290 PF00072 Response regulator receiver domain DS748_RS04290 PF00486 Transcriptional regulatory protein, C terminal DS748_RS04295 PF00149 Calcineurin-like phosphoesterase DS748_RS04295 PF12320 Type 5 capsule protein repressor C-terminal domain DS748_RS04300 PF13476 AAA domain DS748_RS04310 PF00480 ROK family DS748_RS04315 PF04381 Putative exonuclease, RdgC DS748_RS04320 PF06865 Pyrimidine/purine nucleoside phosphorylase DS748_RS04325 PF07302 AroM protein DS748_RS04330 PF16362 YaiA protein DS748_RS04335 PF01202 Shikimate kinase DS748_RS04340 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DS748_RS04345 PF03807 NADP oxidoreductase coenzyme F420-dependent DS748_RS04345 PF14748 Pyrroline-5-carboxylate reductase dimerisation DS748_RS04350 PF00990 Diguanylate cyclase, GGDEF domain DS748_RS04350 PF05230 MASE2 domain DS748_RS04355 PF07769 psiF repeat DS748_RS04360 PF10796 Sigma-S stabilisation anti-adaptor protein DS748_RS04365 PF07690 Major Facilitator Superfamily DS748_RS04375 PF07478 D-ala D-ala ligase C-terminus DS748_RS04375 PF01820 D-ala D-ala ligase N-terminus DS748_RS04380 PF10953 Protein of unknown function (DUF2754) DS748_RS04385 PF10954 Protein of unknown function (DUF2755) DS748_RS04390 PF07759 Protein of unknown function (DUF1615) DS748_RS04395 PF05992 SbmA/BacA-like family DS748_RS04405 PF00144 Beta-lactamase DS748_RS04410 PF15977 Winged helix-turn-helix DNA binding DS748_RS04415 PF03797 Autotransporter beta-domain DS748_RS04420 PF00490 Delta-aminolevulinic acid dehydratase DS748_RS04425 PF00501 AMP-binding enzyme DS748_RS04425 PF13193 AMP-binding enzyme C-terminal domain DS748_RS04425 PF16177 Acetyl-coenzyme A synthetase N-terminus DS748_RS04430 PF03972 MmgE/PrpD family DS748_RS04435 PF00285 Citrate synthase, C-terminal domain DS748_RS04445 PF06506 Propionate catabolism activator DS748_RS04445 PF02954 Bacterial regulatory protein, Fis family DS748_RS04445 PF00158 Sigma-54 interaction domain DS748_RS04450 PF07338 Protein of unknown function (DUF1471) DS748_RS04455 PF01810 LysE type translocator DS748_RS04460 PF07715 TonB-dependent Receptor Plug Domain DS748_RS04460 PF00593 TonB dependent receptor DS748_RS04475 PF02322 Cytochrome bd terminal oxidase subunit II DS748_RS04480 PF01654 Cytochrome bd terminal oxidase subunit I DS748_RS04495 PF01555 DNA methylase DS748_RS04495 PF18273 Type III R-M EcoP15I C-terminal domain DS748_RS04500 PF07690 Major Facilitator Superfamily DS748_RS04530 PF13505 Outer membrane protein beta-barrel domain DS748_RS04545 PF00563 EAL domain DS748_RS04545 PF12792 CSS motif domain associated with EAL DS748_RS04560 PF16970 Type-1 fimbrial protein, A DS748_RS04565 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS04565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS04570 PF13953 PapC C-terminal domain DS748_RS04570 PF13954 PapC N-terminal domain DS748_RS04570 PF00577 Outer membrane usher protein DS748_RS04580 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS04580 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS04595 PF00171 Aldehyde dehydrogenase family DS748_RS04600 PF00696 Amino acid kinase family DS748_RS04600 PF01472 PUA domain DS748_RS04605 PF00267 Gram-negative porin DS748_RS04610 PF07417 Sigma factor-binding transcriptional regulator Crl DS748_RS04615 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) DS748_RS04620 PF00156 Phosphoribosyl transferase domain DS748_RS04625 PF01546 Peptidase family M20/M25/M40 DS748_RS04625 PF07687 Peptidase dimerisation domain DS748_RS04630 PF00472 RF-1 domain DS748_RS04640 PF11798 IMS family HHH motif DS748_RS04640 PF11799 impB/mucB/samB family C-terminal domain DS748_RS04640 PF00817 impB/mucB/samB family DS748_RS04645 PF03734 L,D-transpeptidase catalytic domain DS748_RS04650 PF13230 Glutamine amidotransferases class-II DS748_RS04655 PF13580 SIS domain DS748_RS04660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DS748_RS04660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DS748_RS04660 PF09317 Domain of unknown function (DUF1974) DS748_RS04660 PF02770 Acyl-CoA dehydrogenase, middle domain DS748_RS04665 PF00795 Carbon-nitrogen hydrolase DS748_RS04680 PF13505 Outer membrane protein beta-barrel domain DS748_RS04700 PF13404 AsnC-type helix-turn-helix domain DS748_RS04700 PF01037 Lrp/AsnC ligand binding domain DS748_RS04745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS04745 PF03466 LysR substrate binding domain DS748_RS04765 PF00577 Outer membrane usher protein DS748_RS04765 PF13954 PapC N-terminal domain DS748_RS04765 PF13953 PapC C-terminal domain DS748_RS04770 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS04770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS04805 PF03527 RHS protein DS748_RS04805 PF05593 RHS Repeat DS748_RS04820 PF05593 RHS Repeat DS748_RS04820 PF03527 RHS protein DS748_RS04830 PF04717 Type VI secretion system, phage-baseplate injector DS748_RS04885 PF00691 OmpA family DS748_RS04885 PF05736 OprF membrane domain DS748_RS04890 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DS748_RS04920 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DS748_RS04930 PF17871 AAA lid domain DS748_RS04930 PF10431 C-terminal, D2-small domain, of ClpB protein DS748_RS04930 PF07724 AAA domain (Cdc48 subfamily) DS748_RS04930 PF00004 ATPase family associated with various cellular activities (AAA) DS748_RS04945 PF04965 Gene 25-like lysozyme DS748_RS04950 PF05947 Type VI secretion system, TssF DS748_RS04970 PF00929 Exonuclease DS748_RS04975 PF00075 RNase H DS748_RS04980 PF08241 Methyltransferase domain DS748_RS04985 PF00753 Metallo-beta-lactamase superfamily DS748_RS04985 PF16123 Hydroxyacylglutathione hydrolase C-terminus DS748_RS04990 PF01464 Transglycosylase SLT domain DS748_RS04990 PF01476 LysM domain DS748_RS04995 PF08241 Methyltransferase domain DS748_RS05000 PF03372 Endonuclease/Exonuclease/phosphatase family DS748_RS05005 PF07690 Major Facilitator Superfamily DS748_RS05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS05010 PF03466 LysR substrate binding domain DS748_RS05015 PF00248 Aldo/keto reductase family DS748_RS05050 PF00004 ATPase family associated with various cellular activities (AAA) DS748_RS05050 PF07724 AAA domain (Cdc48 subfamily) DS748_RS05050 PF17871 AAA lid domain DS748_RS05050 PF10431 C-terminal, D2-small domain, of ClpB protein DS748_RS05050 PF02861 Clp amino terminal domain, pathogenicity island component DS748_RS05055 PF02578 Multi-copper polyphenol oxidoreductase laccase DS748_RS05060 PF00849 RNA pseudouridylate synthase DS748_RS05060 PF01479 S4 domain DS748_RS05065 PF13525 Outer membrane lipoprotein DS748_RS05070 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DS748_RS05080 PF00800 Prephenate dehydratase DS748_RS05080 PF01817 Chorismate mutase type II DS748_RS05085 PF08450 SMP-30/Gluconolactonase/LRE-like region DS748_RS05090 PF01817 Chorismate mutase type II DS748_RS05090 PF02153 Prephenate dehydrogenase DS748_RS05095 PF00793 DAHP synthetase I family DS748_RS05100 PF13689 YfiR/HmsC-like DS748_RS05105 PF00990 Diguanylate cyclase, GGDEF domain DS748_RS05105 PF17152 Periplasmic sensor domain DS748_RS05110 PF01245 Ribosomal protein L19 DS748_RS05115 PF01746 tRNA (Guanine-1)-methyltransferase DS748_RS05120 PF05239 PRC-barrel domain DS748_RS05120 PF01782 RimM N-terminal domain DS748_RS05125 PF00886 Ribosomal protein S16 DS748_RS05130 PF00448 SRP54-type protein, GTPase domain DS748_RS05130 PF02881 SRP54-type protein, helical bundle domain DS748_RS05130 PF02978 Signal peptide binding domain DS748_RS05140 PF01578 Cytochrome C assembly protein DS748_RS05145 PF00571 CBS domain DS748_RS05145 PF03471 Transporter associated domain DS748_RS05145 PF01595 Cyclin M transmembrane N-terminal domain DS748_RS05155 PF01025 GrpE DS748_RS05165 PF01513 ATP-NAD kinase DS748_RS05170 PF02463 RecF/RecN/SMC N terminal domain DS748_RS05175 PF04355 SmpA / OmlA family DS748_RS05180 PF03658 RnfH family Ubiquitin DS748_RS05185 PF03364 Polyketide cyclase / dehydrase and lipid transport DS748_RS05190 PF01668 SmpB protein DS748_RS05205 PF00005 ABC transporter DS748_RS05205 PF00664 ABC transporter transmembrane region DS748_RS05210 PF00529 HlyD membrane-fusion protein of T1SS DS748_RS05210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS748_RS05225 PF04606 Ogr/Delta-like zinc finger DS748_RS05260 PF04984 Phage tail sheath protein subtilisin-like domain DS748_RS05260 PF17482 Phage tail sheath C-terminal domain DS748_RS05265 PF00239 Resolvase, N terminal domain DS748_RS05265 PF02796 Helix-turn-helix domain of resolvase DS748_RS05280 PF06722 Protein of unknown function (DUF1205) DS748_RS05285 PF00664 ABC transporter transmembrane region DS748_RS05285 PF00005 ABC transporter DS748_RS05295 PF00756 Putative esterase DS748_RS05300 PF00593 TonB dependent receptor DS748_RS05300 PF07715 TonB-dependent Receptor Plug Domain DS748_RS05315 PF00805 Pentapeptide repeats (8 copies) DS748_RS05320 PF04393 Protein of unknown function (DUF535) DS748_RS05335 PF03824 High-affinity nickel-transport protein DS748_RS05340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS05340 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS05345 PF00486 Transcriptional regulatory protein, C terminal DS748_RS05345 PF00072 Response regulator receiver domain DS748_RS05360 PF01970 Tripartite tricarboxylate transporter TctA family DS748_RS05365 PF08943 CsiD DS748_RS05370 PF01266 FAD dependent oxidoreductase DS748_RS05375 PF00171 Aldehyde dehydrogenase family DS748_RS05380 PF00202 Aminotransferase class-III DS748_RS05385 PF00324 Amino acid permease DS748_RS05390 PF00392 Bacterial regulatory proteins, gntR family DS748_RS05390 PF07729 FCD domain DS748_RS05405 PF01679 Proteolipid membrane potential modulator DS748_RS05410 PF01022 Bacterial regulatory protein, arsR family DS748_RS05415 PF11127 Protein of unknown function (DUF2892) DS748_RS05415 PF00581 Rhodanese-like domain DS748_RS05425 PF00816 H-NS histone family DS748_RS05435 PF06610 L-alanine exporter DS748_RS05440 PF09400 Protein of unknown function (DUF2002) DS748_RS05445 PF05957 Bacterial protein of unknown function (DUF883) DS748_RS05455 PF02627 Carboxymuconolactone decarboxylase family DS748_RS05465 PF00462 Glutaredoxin DS748_RS05470 PF07972 NrdI Flavodoxin like DS748_RS05475 PF02867 Ribonucleotide reductase, barrel domain DS748_RS05475 PF08343 Ribonucleotide reductase N-terminal DS748_RS05475 PF00317 Ribonucleotide reductase, all-alpha domain DS748_RS05480 PF00268 Ribonucleotide reductase, small chain DS748_RS05495 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS05500 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DS748_RS05505 PF07690 Major Facilitator Superfamily DS748_RS05510 PF01047 MarR family DS748_RS05515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS748_RS05515 PF00529 HlyD membrane-fusion protein of T1SS DS748_RS05520 PF07690 Major Facilitator Superfamily DS748_RS05530 PF02664 S-Ribosylhomocysteinase (LuxS) DS748_RS05535 PF04262 Glutamate-cysteine ligase DS748_RS05540 PF09335 SNARE associated Golgi protein DS748_RS05545 PF13419 Haloacid dehalogenase-like hydrolase DS748_RS05580 PF02599 Global regulator protein family DS748_RS05585 PF02272 DHHA1 domain DS748_RS05585 PF01411 tRNA synthetases class II (A) DS748_RS05585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DS748_RS05595 PF02631 RecX family DS748_RS05600 PF00154 recA bacterial DNA recombination protein DS748_RS05605 PF02464 Competence-damaged protein DS748_RS05615 PF13406 Transglycosylase SLT domain DS748_RS05620 PF03608 PTS system enzyme II sorbitol-specific factor DS748_RS05625 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DS748_RS05625 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DS748_RS05630 PF03829 PTS system glucitol/sorbitol-specific IIA component DS748_RS05635 PF00106 short chain dehydrogenase DS748_RS05640 PF06923 Glucitol operon activator protein (GutM) DS748_RS05645 PF08220 DeoR-like helix-turn-helix domain DS748_RS05645 PF00455 DeoR C terminal sensor domain DS748_RS05650 PF00571 CBS domain DS748_RS05650 PF01380 SIS domain DS748_RS05655 PF00158 Sigma-54 interaction domain DS748_RS05655 PF01590 GAF domain DS748_RS05660 PF00258 Flavodoxin DS748_RS05660 PF00753 Metallo-beta-lactamase superfamily DS748_RS05660 PF00301 Rubredoxin DS748_RS05665 PF18113 Rubredoxin binding C-terminal domain DS748_RS05665 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS05670 PF00708 Acylphosphatase DS748_RS05670 PF17788 HypF Kae1-like domain DS748_RS05670 PF01300 Telomere recombination DS748_RS05670 PF07503 HypF finger DS748_RS05675 PF13247 4Fe-4S dicluster domain DS748_RS05675 PF12800 4Fe-4S binding domain DS748_RS05685 PF01750 Hydrogenase maturation protease DS748_RS05690 PF07450 Formate hydrogenlyase maturation protein HycH DS748_RS05695 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DS748_RS05700 PF12838 4Fe-4S dicluster domain DS748_RS05705 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DS748_RS05705 PF00374 Nickel-dependent hydrogenase DS748_RS05705 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DS748_RS05710 PF00146 NADH dehydrogenase DS748_RS05715 PF00361 Proton-conducting membrane transporter DS748_RS05720 PF13247 4Fe-4S dicluster domain DS748_RS05725 PF11046 Transcriptional repressor of hyc and hyp operons DS748_RS05735 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DS748_RS05740 PF02492 CobW/HypB/UreG, nucleotide-binding domain DS748_RS05745 PF01455 HupF/HypC family DS748_RS05750 PF01924 Hydrogenase formation hypA family DS748_RS05755 PF00586 AIR synthase related protein, N-terminal domain DS748_RS05755 PF02769 AIR synthase related protein, C-terminal domain DS748_RS05760 PF02954 Bacterial regulatory protein, Fis family DS748_RS05760 PF00158 Sigma-54 interaction domain DS748_RS05760 PF01590 GAF domain DS748_RS05765 PF11756 Nitrous oxide-stimulated promoter DS748_RS05770 PF01297 Zinc-uptake complex component A periplasmic DS748_RS05775 PF00005 ABC transporter DS748_RS05780 PF00950 ABC 3 transport family DS748_RS05785 PF00950 ABC 3 transport family DS748_RS05800 PF12833 Helix-turn-helix domain DS748_RS05815 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) DS748_RS05820 PF01514 Secretory protein of YscJ/FliF family DS748_RS05830 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF DS748_RS05835 PF09480 Type III secretion system protein PrgH-EprH (PrgH) DS748_RS05840 PF12833 Helix-turn-helix domain DS748_RS05845 PF00486 Transcriptional regulatory protein, C terminal DS748_RS05850 PF01464 Transglycosylase SLT domain DS748_RS05855 PF00102 Protein-tyrosine phosphatase DS748_RS05855 PF09119 SicP binding DS748_RS05855 PF03545 Yersinia virulence determinant (YopE) DS748_RS05870 PF00550 Phosphopantetheine attachment site DS748_RS05875 PF09052 SipA N-terminal domain DS748_RS05880 PF06511 Type III secretion systems tip complex components DS748_RS05885 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) DS748_RS05890 PF16535 Type III cell invasion protein SipB DS748_RS05890 PF04888 Secretion system effector C (SseC) like family DS748_RS05895 PF07720 Tetratricopeptide repeat DS748_RS05900 PF01312 FlhB HrpN YscU SpaS Family DS748_RS05905 PF01311 Bacterial export proteins, family 1 DS748_RS05910 PF01313 Bacterial export proteins, family 3 DS748_RS05915 PF00813 FliP family DS748_RS05920 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DS748_RS05925 PF02510 Surface presentation of antigens protein DS748_RS05930 PF02090 Salmonella surface presentation of antigen gene type M protein DS748_RS05935 PF02874 ATP synthase alpha/beta family, beta-barrel domain DS748_RS05935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DS748_RS05935 PF18269 T3SS EscN ATPase C-terminal domain DS748_RS05940 PF03519 Invasion protein B family DS748_RS05945 PF00771 FHIPEP family DS748_RS05950 PF07201 HrpJ-like domain DS748_RS05955 PF03958 Bacterial type II/III secretion system short domain DS748_RS05955 PF00263 Bacterial type II and III secretion system protein DS748_RS05960 PF12833 Helix-turn-helix domain DS748_RS05965 PF04741 InvH outer membrane lipoprotein DS748_RS05990 PF00149 Calcineurin-like phosphoesterase DS748_RS06000 PF05192 MutS domain III DS748_RS06000 PF05190 MutS family domain IV DS748_RS06000 PF00488 MutS domain V DS748_RS06000 PF01624 MutS domain I DS748_RS06000 PF05188 MutS domain II DS748_RS06010 PF07690 Major Facilitator Superfamily DS748_RS06015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS06015 PF03466 LysR substrate binding domain DS748_RS06020 PF02447 GntP family permease DS748_RS06025 PF01370 NAD dependent epimerase/dehydratase family DS748_RS06030 PF01261 Xylose isomerase-like TIM barrel DS748_RS06035 PF00596 Class II Aldolase and Adducin N-terminal domain DS748_RS06050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DS748_RS06050 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DS748_RS06055 PF08220 DeoR-like helix-turn-helix domain DS748_RS06055 PF00455 DeoR C terminal sensor domain DS748_RS06060 PF01047 MarR family DS748_RS06065 PF02441 Flavoprotein DS748_RS06070 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DS748_RS06080 PF00140 Sigma-70 factor, region 1.2 DS748_RS06080 PF04542 Sigma-70 region 2 DS748_RS06080 PF04539 Sigma-70 region 3 DS748_RS06080 PF04545 Sigma-70, region 4 DS748_RS06085 PF01476 LysM domain DS748_RS06085 PF01551 Peptidase family M23 DS748_RS06095 PF01975 Survival protein SurE DS748_RS06100 PF01142 tRNA pseudouridine synthase D (TruD) DS748_RS06105 PF02542 YgbB family DS748_RS06110 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DS748_RS06115 PF04977 Septum formation initiator DS748_RS06120 PF12084 Protein of unknown function (DUF3561) DS748_RS06130 PF00009 Elongation factor Tu GTP binding domain DS748_RS06135 PF01507 Phosphoadenosine phosphosulfate reductase family DS748_RS06140 PF04389 Peptidase family M28 DS748_RS06145 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) DS748_RS06150 PF01867 CRISPR associated protein Cas1 DS748_RS06160 PF09704 CRISPR-associated protein (Cas_Cas5) DS748_RS06165 PF09344 CT1975-like protein DS748_RS06185 PF11047 Salmonella outer protein D DS748_RS06190 PF01507 Phosphoadenosine phosphosulfate reductase family DS748_RS06200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DS748_RS06200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DS748_RS06205 PF00175 Oxidoreductase NAD-binding domain DS748_RS06205 PF00258 Flavodoxin DS748_RS06205 PF00667 FAD binding domain DS748_RS06215 PF01242 6-pyruvoyl tetrahydropterin synthase DS748_RS06220 PF12706 Beta-lactamase superfamily domain DS748_RS06220 PF03099 Biotin/lipoate A/B protein ligase family DS748_RS06230 PF04055 Radical SAM superfamily DS748_RS06235 PF00113 Enolase, C-terminal TIM barrel domain DS748_RS06235 PF03952 Enolase, N-terminal domain DS748_RS06240 PF06418 CTP synthase N-terminus DS748_RS06240 PF00117 Glutamine amidotransferase class-I DS748_RS06245 PF03819 MazG nucleotide pyrophosphohydrolase domain DS748_RS06255 PF13953 PapC C-terminal domain DS748_RS06255 PF00577 Outer membrane usher protein DS748_RS06255 PF13954 PapC N-terminal domain DS748_RS06260 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS06260 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS06265 PF00419 Fimbrial protein DS748_RS06275 PF00419 Fimbrial protein DS748_RS06295 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DS748_RS06300 PF02824 TGS domain DS748_RS06300 PF13291 ACT domain DS748_RS06300 PF04607 Region found in RelA / SpoT proteins DS748_RS06305 PF05958 tRNA (Uracil-5-)-methyltransferase DS748_RS06305 PF01938 TRAM domain DS748_RS06310 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DS748_RS06310 PF00672 HAMP domain DS748_RS06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS06310 PF00072 Response regulator receiver domain DS748_RS06310 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS06310 PF01627 Hpt domain DS748_RS06315 PF02595 Glycerate kinase family DS748_RS06320 PF13378 Enolase C-terminal domain-like DS748_RS06325 PF13378 Enolase C-terminal domain-like DS748_RS06325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS748_RS06330 PF07690 Major Facilitator Superfamily DS748_RS06340 PF00258 Flavodoxin DS748_RS06345 PF00849 RNA pseudouridylate synthase DS748_RS06350 PF04287 tRNA pseudouridine synthase C DS748_RS06360 PF07348 Syd protein (SUKH-2) DS748_RS06365 PF14489 QueF-like protein DS748_RS06365 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DS748_RS06370 PF03641 Possible lysine decarboxylase DS748_RS06370 PF11892 Domain of unknown function (DUF3412) DS748_RS06370 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DS748_RS06380 PF03313 Serine dehydratase alpha chain DS748_RS06380 PF03315 Serine dehydratase beta chain DS748_RS06390 PF01367 5'-3' exonuclease, C-terminal SAM fold DS748_RS06390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DS748_RS06395 PF00465 Iron-containing alcohol dehydrogenase DS748_RS06400 PF00596 Class II Aldolase and Adducin N-terminal domain DS748_RS06405 PF07690 Major Facilitator Superfamily DS748_RS06410 PF02952 L-fucose isomerase, C-terminal domain DS748_RS06410 PF07881 L-fucose isomerase, first N-terminal domain DS748_RS06410 PF07882 L-fucose isomerase, second N-terminal domain DS748_RS06415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DS748_RS06415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DS748_RS06420 PF05025 RbsD / FucU transport protein family DS748_RS06425 PF08220 DeoR-like helix-turn-helix domain DS748_RS06425 PF00455 DeoR C terminal sensor domain DS748_RS06430 PF18125 RlmM ferredoxin-like domain DS748_RS06430 PF01728 FtsJ-like methyltransferase DS748_RS06435 PF04241 Protein of unknown function (DUF423) DS748_RS06440 PF03466 LysR substrate binding domain DS748_RS06440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS06445 PF06004 Bacterial protein of unknown function (DUF903) DS748_RS06450 PF00266 Aminotransferase class-V DS748_RS06455 PF02657 Fe-S metabolism associated domain DS748_RS06460 PF00892 EamA-like transporter family DS748_RS06465 PF00899 ThiF family DS748_RS06470 PF06725 3D domain DS748_RS06470 PF03562 MltA specific insert domain DS748_RS06485 PF01520 N-acetylmuramoyl-L-alanine amidase DS748_RS06485 PF11741 AMIN domain DS748_RS06490 PF00696 Amino acid kinase family DS748_RS06490 PF00583 Acetyltransferase (GNAT) family DS748_RS06495 PF13538 UvrD-like helicase C-terminal domain DS748_RS06500 PF12705 PD-(D/E)XK nuclease superfamily DS748_RS06500 PF00580 UvrD/REP helicase N-terminal domain DS748_RS06500 PF13361 UvrD-like helicase C-terminal domain DS748_RS06505 PF05193 Peptidase M16 inactive domain DS748_RS06505 PF00675 Insulinase (Peptidase family M16) DS748_RS06505 PF16187 Middle or third domain of peptidase_M16 DS748_RS06510 PF17946 RecC C-terminal domain DS748_RS06515 PF07963 Prokaryotic N-terminal methylation motif DS748_RS06515 PF12528 Type II secretion prepilin peptidase dependent protein C DS748_RS06520 PF10713 Protein of unknown function (DUF2509) DS748_RS06525 PF07963 Prokaryotic N-terminal methylation motif DS748_RS06530 PF07963 Prokaryotic N-terminal methylation motif DS748_RS06535 PF01797 Transposase IS200 like DS748_RS06545 PF00303 Thymidylate synthase DS748_RS06550 PF01790 Prolipoprotein diacylglyceryl transferase DS748_RS06555 PF01590 GAF domain DS748_RS06555 PF05524 PEP-utilising enzyme, N-terminal DS748_RS06555 PF00391 PEP-utilising enzyme, mobile domain DS748_RS06555 PF02896 PEP-utilising enzyme, TIM barrel domain DS748_RS06560 PF00293 NUDIX domain DS748_RS06565 PF02976 DNA mismatch repair enzyme MutH DS748_RS06570 PF03741 Integral membrane protein TerC family DS748_RS06575 PF06004 Bacterial protein of unknown function (DUF903) DS748_RS06580 PF00248 Aldo/keto reductase family DS748_RS06585 PF07690 Major Facilitator Superfamily DS748_RS06590 PF01553 Acyltransferase DS748_RS06590 PF00501 AMP-binding enzyme DS748_RS06595 PF01797 Transposase IS200 like DS748_RS06615 PF00356 Bacterial regulatory proteins, lacI family DS748_RS06620 PF00356 Bacterial regulatory proteins, lacI family DS748_RS06625 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DS748_RS06625 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DS748_RS06630 PF03466 LysR substrate binding domain DS748_RS06630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS06635 PF01177 Asp/Glu/Hydantoin racemase DS748_RS06640 PF00083 Sugar (and other) transporter DS748_RS06655 PF04962 KduI/IolB family DS748_RS06665 PF02803 Thiolase, C-terminal domain DS748_RS06665 PF00108 Thiolase, N-terminal domain DS748_RS06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS06670 PF03466 LysR substrate binding domain DS748_RS06680 PF03222 Tryptophan/tyrosine permease family DS748_RS06685 PF02583 Metal-sensitive transcriptional repressor DS748_RS06710 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS06710 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS06715 PF13953 PapC C-terminal domain DS748_RS06715 PF13954 PapC N-terminal domain DS748_RS06715 PF00577 Outer membrane usher protein DS748_RS06720 PF00419 Fimbrial protein DS748_RS06730 PF13505 Outer membrane protein beta-barrel domain DS748_RS06740 PF01850 PIN domain DS748_RS06780 PF00589 Phage integrase family DS748_RS06780 PF02899 Phage integrase, N-terminal SAM-like domain DS748_RS06790 PF01476 LysM domain DS748_RS06790 PF01551 Peptidase family M23 DS748_RS06795 PF00293 NUDIX domain DS748_RS06800 PF01336 OB-fold nucleic acid binding domain DS748_RS06800 PF00152 tRNA synthetases class II (D, K and N) DS748_RS06810 PF17768 RecJ OB domain DS748_RS06810 PF01368 DHH family DS748_RS06810 PF02272 DHHA1 domain DS748_RS06815 PF13098 Thioredoxin-like domain DS748_RS06815 PF10411 Disulfide bond isomerase protein N-terminus DS748_RS06820 PF02899 Phage integrase, N-terminal SAM-like domain DS748_RS06820 PF00589 Phage integrase family DS748_RS06825 PF00258 Flavodoxin DS748_RS06830 PF07254 Membrane-bound toxin component of toxin-antitoxin system DS748_RS06835 PF03937 Flavinator of succinate dehydrogenase DS748_RS06845 PF01571 Aminomethyltransferase folate-binding domain DS748_RS06855 PF03006 Haemolysin-III related DS748_RS06860 PF04266 ASCH domain DS748_RS06865 PF00232 Glycosyl hydrolase family 1 DS748_RS06880 PF02347 Glycine cleavage system P-protein DS748_RS06885 PF01597 Glycine cleavage H-protein DS748_RS06890 PF08669 Glycine cleavage T-protein C-terminal barrel domain DS748_RS06890 PF01571 Aminomethyltransferase folate-binding domain DS748_RS06895 PF01494 FAD binding domain DS748_RS06900 PF01494 FAD binding domain DS748_RS06905 PF00557 Metallopeptidase family M24 DS748_RS06905 PF05195 Aminopeptidase P, N-terminal domain DS748_RS06910 PF03695 Uncharacterised protein family (UPF0149) DS748_RS06915 PF05164 Cell division protein ZapA DS748_RS06925 PF01812 5-formyltetrahydrofolate cyclo-ligase family DS748_RS06930 PF01842 ACT domain DS748_RS06930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS748_RS06930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DS748_RS06935 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DS748_RS06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS06940 PF03466 LysR substrate binding domain DS748_RS06950 PF04402 Protein of unknown function (DUF541) DS748_RS06955 PF01810 LysE type translocator DS748_RS06960 PF05552 Conserved TM helix DS748_RS06960 PF00924 Mechanosensitive ion channel DS748_RS06970 PF01797 Transposase IS200 like DS748_RS06980 PF01116 Fructose-bisphosphate aldolase class-II DS748_RS06985 PF00162 Phosphoglycerate kinase DS748_RS06990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DS748_RS06990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DS748_RS07015 PF00005 ABC transporter DS748_RS07020 PF00005 ABC transporter DS748_RS07025 PF01797 Transposase IS200 like DS748_RS07040 PF02779 Transketolase, pyrimidine binding domain DS748_RS07040 PF00456 Transketolase, thiamine diphosphate binding domain DS748_RS07040 PF02780 Transketolase, C-terminal domain DS748_RS07045 PF01435 Peptidase family M48 DS748_RS07050 PF00491 Arginase family DS748_RS07055 PF17810 Arginine decarboxylase helical bundle domain DS748_RS07055 PF17944 Arginine decarboxylase C-terminal helical extension DS748_RS07055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DS748_RS07065 PF17430 Uncharacterized YqgC-like DS748_RS07075 PF00438 S-adenosylmethionine synthetase, N-terminal domain DS748_RS07075 PF02773 S-adenosylmethionine synthetase, C-terminal domain DS748_RS07075 PF02772 S-adenosylmethionine synthetase, central domain DS748_RS07080 PF00083 Sugar (and other) transporter DS748_RS07085 PF10263 SprT-like family DS748_RS07085 PF17283 SprT-like zinc ribbon domain DS748_RS07090 PF04231 Endonuclease I DS748_RS07095 PF04452 RNA methyltransferase DS748_RS07100 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DS748_RS07100 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DS748_RS07105 PF02622 Uncharacterized ACR, COG1678 DS748_RS07110 PF03652 Holliday junction resolvase DS748_RS07120 PF00437 Type II/IV secretion system protein DS748_RS07125 PF01168 Alanine racemase, N-terminal domain DS748_RS07130 PF02325 YGGT family DS748_RS07135 PF02594 Uncharacterised ACR, YggU family COG1872 DS748_RS07140 PF01725 Ham1 family DS748_RS07145 PF06969 HemN C-terminal domain DS748_RS07145 PF04055 Radical SAM superfamily DS748_RS07150 PF06717 Protein of unknown function (DUF1202) DS748_RS07155 PF17763 Glutaminase/Asparaginase C-terminal domain DS748_RS07155 PF00710 Asparaginase, N-terminal DS748_RS07165 PF01797 Transposase IS200 like DS748_RS07170 PF11101 Protein of unknown function (DUF2884) DS748_RS07175 PF04320 Protein with unknown function (DUF469) DS748_RS07180 PF02390 Putative methyltransferase DS748_RS07185 PF14815 NUDIX domain DS748_RS07185 PF00633 Helix-hairpin-helix motif DS748_RS07185 PF00730 HhH-GPD superfamily base excision DNA repair protein DS748_RS07190 PF04362 Bacterial Fe(2+) trafficking DS748_RS07195 PF01464 Transglycosylase SLT domain DS748_RS07195 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DS748_RS07200 PF03825 Nucleoside H+ symporter DS748_RS07210 PF04474 Protein of unknown function (DUF554) DS748_RS07245 PF01320 Colicin immunity protein / pyocin immunity protein DS748_RS07255 PF01320 Colicin immunity protein / pyocin immunity protein DS748_RS07295 PF00196 Bacterial regulatory proteins, luxR family DS748_RS07305 PF13520 Amino acid permease DS748_RS07315 PF01266 FAD dependent oxidoreductase DS748_RS07320 PF00171 Aldehyde dehydrogenase family DS748_RS07325 PF04965 Gene 25-like lysozyme DS748_RS07340 PF01522 Polysaccharide deacetylase DS748_RS07350 PF07690 Major Facilitator Superfamily DS748_RS07355 PF03786 D-mannonate dehydratase (UxuA) DS748_RS07360 PF08125 Mannitol dehydrogenase C-terminal domain DS748_RS07360 PF01232 Mannitol dehydrogenase Rossmann domain DS748_RS07365 PF02614 Glucuronate isomerase DS748_RS07375 PF05257 CHAP domain DS748_RS07375 PF03738 Glutathionylspermidine synthase preATP-grasp DS748_RS07380 PF02798 Glutathione S-transferase, N-terminal domain DS748_RS07390 PF01497 Periplasmic binding protein DS748_RS07395 PF01455 HupF/HypC family DS748_RS07400 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DS748_RS07405 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE DS748_RS07410 PF01750 Hydrogenase maturation protease DS748_RS07415 PF00374 Nickel-dependent hydrogenase DS748_RS07420 PF03916 Polysulphide reductase, NrfD DS748_RS07425 PF13247 4Fe-4S dicluster domain DS748_RS07430 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DS748_RS07430 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DS748_RS07435 PF11115 Protein of unknown function (DUF2623) DS748_RS07445 PF03350 Uncharacterized protein family, UPF0114 DS748_RS07470 PF02472 Biopolymer transport protein ExbD/TolR DS748_RS07475 PF01618 MotA/TolQ/ExbB proton channel family DS748_RS07480 PF01053 Cys/Met metabolism PLP-dependent enzyme DS748_RS07485 PF09335 SNARE associated Golgi protein DS748_RS07490 PF06719 AraC-type transcriptional regulator N-terminus DS748_RS07490 PF12833 Helix-turn-helix domain DS748_RS07495 PF00465 Iron-containing alcohol dehydrogenase DS748_RS07505 PF00939 Sodium:sulfate symporter transmembrane region DS748_RS07515 PF08497 Radical SAM N-terminal DS748_RS07515 PF04055 Radical SAM superfamily DS748_RS07515 PF11842 Domain of unknown function (DUF3362) DS748_RS07545 PF07732 Multicopper oxidase DS748_RS07545 PF00394 Multicopper oxidase DS748_RS07545 PF07731 Multicopper oxidase DS748_RS07550 PF01553 Acyltransferase DS748_RS07555 PF03989 DNA gyrase C-terminal domain, beta-propeller DS748_RS07555 PF00521 DNA gyrase/topoisomerase IV, subunit A DS748_RS07560 PF06445 GyrI-like small molecule binding domain DS748_RS07565 PF04076 Bacterial OB fold (BOF) protein DS748_RS07570 PF00486 Transcriptional regulatory protein, C terminal DS748_RS07570 PF00072 Response regulator receiver domain DS748_RS07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS07575 PF08521 Two-component sensor kinase N-terminal DS748_RS07575 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS07585 PF03992 Antibiotic biosynthesis monooxygenase DS748_RS07590 PF00204 DNA gyrase B DS748_RS07590 PF01751 Toprim domain DS748_RS07590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS07590 PF00986 DNA gyrase B subunit, carboxyl terminus DS748_RS07595 PF05728 Uncharacterised protein family (UPF0227) DS748_RS07600 PF00149 Calcineurin-like phosphoesterase DS748_RS07605 PF06853 Protein of unknown function (DUF1249) DS748_RS07610 PF00293 NUDIX domain DS748_RS07615 PF02321 Outer membrane efflux protein DS748_RS07620 PF06693 Protein of unknown function (DUF1190) DS748_RS07625 PF03738 Glutathionylspermidine synthase preATP-grasp DS748_RS07630 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DS748_RS07635 PF02535 ZIP Zinc transporter DS748_RS07640 PF05935 Arylsulfotransferase (ASST) DS748_RS07640 PF17425 Arylsulfotransferase Ig-like domain DS748_RS07645 PF01323 DSBA-like thioredoxin domain DS748_RS07650 PF02600 Disulfide bond formation protein DsbB DS748_RS07655 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DS748_RS07660 PF04380 Membrane fusogenic activity DS748_RS07665 PF08971 Glycogen synthesis protein DS748_RS07670 PF07290 Protein of unknown function (DUF1449) DS748_RS07675 PF01145 SPFH domain / Band 7 family DS748_RS07675 PF15975 Flotillin DS748_RS07685 PF01467 Cytidylyltransferase-like DS748_RS07685 PF00294 pfkB family carbohydrate kinase DS748_RS07690 PF08335 GlnD PII-uridylyltransferase DS748_RS07690 PF03710 Glutamate-ammonia ligase adenylyltransferase DS748_RS07695 PF01928 CYTH domain DS748_RS07700 PF08239 Bacterial SH3 domain DS748_RS07705 PF01743 Poly A polymerase head domain DS748_RS07705 PF01966 HD domain DS748_RS07705 PF12627 Probable RNA and SrmB- binding site of polymerase A DS748_RS07710 PF02673 Bacitracin resistance protein BacA DS748_RS07715 PF02152 Dihydroneopterin aldolase DS748_RS07720 PF02660 Glycerol-3-phosphate acyltransferase DS748_RS07725 PF05681 Fumarate hydratase (Fumerase) DS748_RS07730 PF00814 Glycoprotease family DS748_RS07735 PF01165 Ribosomal protein S21 DS748_RS07740 PF08278 DNA primase DnaG DnaB-binding DS748_RS07740 PF01807 CHC2 zinc finger DS748_RS07740 PF08275 DNA primase catalytic core, N-terminal domain DS748_RS07740 PF10410 DnaB-helicase binding domain of primase DS748_RS07745 PF04539 Sigma-70 region 3 DS748_RS07745 PF04545 Sigma-70, region 4 DS748_RS07745 PF04546 Sigma-70, non-essential region DS748_RS07745 PF00140 Sigma-70 factor, region 1.2 DS748_RS07745 PF03979 Sigma-70 factor, region 1.1 DS748_RS07745 PF04542 Sigma-70 region 2 DS748_RS07750 PF03167 Uracil DNA glycosylase superfamily DS748_RS07760 PF08021 Siderophore-interacting FAD-binding domain DS748_RS07760 PF04954 Siderophore-interacting protein DS748_RS07765 PF03551 Transcriptional regulator PadR-like family DS748_RS07770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS748_RS07770 PF02203 Tar ligand binding domain homologue DS748_RS07770 PF00672 HAMP domain DS748_RS07775 PF08447 PAS fold DS748_RS07775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS748_RS07780 PF00202 Aminotransferase class-III DS748_RS07790 PF05175 Methyltransferase small domain DS748_RS07795 PF01863 Protein of unknown function DUF45 DS748_RS07800 PF02698 DUF218 domain DS748_RS07805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DS748_RS07810 PF03741 Integral membrane protein TerC family DS748_RS07815 PF00375 Sodium:dicarboxylate symporter family DS748_RS07820 PF09335 SNARE associated Golgi protein DS748_RS07825 PF13721 SecD export protein N-terminal TM region DS748_RS07830 PF06476 Protein of unknown function (DUF1090) DS748_RS07835 PF05957 Bacterial protein of unknown function (DUF883) DS748_RS07840 PF07332 Putative Actinobacterial Holin-X, holin superfamily III DS748_RS07845 PF13997 YqjK-like protein DS748_RS07850 PF07681 DoxX DS748_RS07855 PF13409 Glutathione S-transferase, N-terminal domain DS748_RS07860 PF05656 Protein of unknown function (DUF805) DS748_RS07865 PF03466 LysR substrate binding domain DS748_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS07870 PF02678 Pirin DS748_RS07870 PF17954 Quercetinase C-terminal cupin domain DS748_RS07880 PF03313 Serine dehydratase alpha chain DS748_RS07895 PF03315 Serine dehydratase beta chain DS748_RS07895 PF03313 Serine dehydratase alpha chain DS748_RS07900 PF02901 Pyruvate formate lyase-like DS748_RS07900 PF01228 Glycine radical DS748_RS07905 PF00871 Acetokinase family DS748_RS07915 PF00291 Pyridoxal-phosphate dependent enzyme DS748_RS07920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS07920 PF03466 LysR substrate binding domain DS748_RS07935 PF02595 Glycerate kinase family DS748_RS07940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DS748_RS07940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DS748_RS07945 PF03328 HpcH/HpaI aldolase/citrate lyase family DS748_RS07950 PF08666 SAF domain DS748_RS07950 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DS748_RS07955 PF00294 pfkB family carbohydrate kinase DS748_RS07960 PF00455 DeoR C terminal sensor domain DS748_RS07960 PF08220 DeoR-like helix-turn-helix domain DS748_RS07965 PF01116 Fructose-bisphosphate aldolase class-II DS748_RS07970 PF00294 pfkB family carbohydrate kinase DS748_RS07975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS748_RS07975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DS748_RS07980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS748_RS07980 PF00381 PTS HPr component phosphorylation site DS748_RS07990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS748_RS07995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DS748_RS08000 PF03611 PTS system sugar-specific permease component DS748_RS08005 PF00107 Zinc-binding dehydrogenase DS748_RS08005 PF08240 Alcohol dehydrogenase GroES-like domain DS748_RS08010 PF08220 DeoR-like helix-turn-helix domain DS748_RS08015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DS748_RS08020 PF04348 LppC putative lipoprotein DS748_RS08025 PF02021 Uncharacterised protein family UPF0102 DS748_RS08030 PF13580 SIS domain DS748_RS08035 PF04972 BON domain DS748_RS08040 PF13460 NAD(P)H-binding DS748_RS08045 PF01965 DJ-1/PfpI family DS748_RS08055 PF01541 GIY-YIG catalytic domain DS748_RS08060 PF13508 Acetyltransferase (GNAT) domain DS748_RS08065 PF02036 SCP-2 sterol transfer family DS748_RS08070 PF01136 Peptidase family U32 DS748_RS08075 PF01136 Peptidase family U32 DS748_RS08080 PF00296 Luciferase-like monooxygenase DS748_RS08085 PF03222 Tryptophan/tyrosine permease family DS748_RS08090 PF03880 DbpA RNA binding domain DS748_RS08090 PF00270 DEAD/DEAH box helicase DS748_RS08090 PF12343 Cold shock protein DEAD box A DS748_RS08090 PF00271 Helicase conserved C-terminal domain DS748_RS08100 PF07719 Tetratricopeptide repeat DS748_RS08100 PF13181 Tetratricopeptide repeat DS748_RS08105 PF00013 KH domain DS748_RS08105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DS748_RS08105 PF01138 3' exoribonuclease family, domain 1 DS748_RS08105 PF00575 S1 RNA binding domain DS748_RS08105 PF03725 3' exoribonuclease family, domain 2 DS748_RS08110 PF00312 Ribosomal protein S15 DS748_RS08115 PF09157 Pseudouridine synthase II TruB, C-terminal DS748_RS08115 PF16198 tRNA pseudouridylate synthase B C-terminal domain DS748_RS08115 PF01509 TruB family pseudouridylate synthase (N terminal domain) DS748_RS08120 PF02033 Ribosome-binding factor A DS748_RS08125 PF11987 Translation-initiation factor 2 DS748_RS08125 PF08364 Bacterial translation initiation factor IF-2 associated region DS748_RS08125 PF04760 Translation initiation factor IF-2, N-terminal region DS748_RS08125 PF00009 Elongation factor Tu GTP binding domain DS748_RS08130 PF13184 NusA-like KH domain DS748_RS08130 PF08529 NusA N-terminal domain DS748_RS08135 PF02576 RimP N-terminal domain DS748_RS08135 PF17384 RimP C-terminal SH3 domain DS748_RS08145 PF00764 Arginosuccinate synthase DS748_RS08155 PF03840 Preprotein translocase SecG subunit DS748_RS08160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DS748_RS08160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DS748_RS08160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DS748_RS08160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DS748_RS08165 PF00809 Pterin binding enzyme DS748_RS08170 PF00004 ATPase family associated with various cellular activities (AAA) DS748_RS08170 PF17862 AAA+ lid domain DS748_RS08170 PF06480 FtsH Extracellular DS748_RS08170 PF01434 Peptidase family M41 DS748_RS08175 PF01728 FtsJ-like methyltransferase DS748_RS08180 PF01985 CRS1 / YhbY (CRM) domain DS748_RS08185 PF01272 Transcription elongation factor, GreA/GreB, C-term DS748_RS08185 PF03449 Transcription elongation factor, N-terminal DS748_RS08190 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DS748_RS08195 PF01018 GTP1/OBG DS748_RS08195 PF01926 50S ribosome-binding GTPase DS748_RS08200 PF00892 EamA-like transporter family DS748_RS08205 PF01016 Ribosomal L27 protein DS748_RS08210 PF00829 Ribosomal prokaryotic L21 protein DS748_RS08215 PF00348 Polyprenyl synthetase DS748_RS08220 PF13693 Winged helix-turn-helix DNA-binding DS748_RS08225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DS748_RS08230 PF01722 BolA-like protein DS748_RS08235 PF13466 STAS domain DS748_RS08240 PF05494 MlaC protein DS748_RS08245 PF02470 MlaD protein DS748_RS08250 PF02405 Permease MlaE DS748_RS08255 PF00005 ABC transporter DS748_RS08260 PF01699 Sodium/calcium exchanger protein DS748_RS08265 PF00571 CBS domain DS748_RS08265 PF01380 SIS domain DS748_RS08275 PF06835 Lipopolysaccharide-assembly, LptC-related DS748_RS08280 PF03968 OstA-like protein DS748_RS08285 PF00005 ABC transporter DS748_RS08285 PF12399 Branched-chain amino acid ATP-binding cassette transporter DS748_RS08290 PF04963 Sigma-54 factor, core binding domain DS748_RS08290 PF00309 Sigma-54 factor, Activator interacting domain (AID) DS748_RS08290 PF04552 Sigma-54, DNA binding domain DS748_RS08295 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DS748_RS08300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS748_RS08305 PF03668 P-loop ATPase protein family DS748_RS08310 PF00381 PTS HPr component phosphorylation site DS748_RS08320 PF10707 PhoP regulatory network protein YrbL DS748_RS08325 PF00912 Transglycosylase DS748_RS08335 PF01627 Hpt domain DS748_RS08335 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS08335 PF18415 Histidine kinase receptor ArcB trans-membrane domain DS748_RS08335 PF00072 Response regulator receiver domain DS748_RS08335 PF00989 PAS fold DS748_RS08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS08340 PF04055 Radical SAM superfamily DS748_RS08340 PF16199 Radical_SAM C-terminal domain DS748_RS08345 PF00310 Glutamine amidotransferases class-II DS748_RS08345 PF01645 Conserved region in glutamate synthase DS748_RS08345 PF01493 GXGXG motif DS748_RS08345 PF04898 Glutamate synthase central domain DS748_RS08350 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DS748_RS08350 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS08355 PF17761 DUF1016 N-terminal domain DS748_RS08355 PF06250 YhcG PDDEXK nuclease domain DS748_RS08360 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DS748_RS08365 PF07969 Amidohydrolase family DS748_RS08370 PF04074 YhcH/YjgK/YiaL DS748_RS08375 PF00480 ROK family DS748_RS08385 PF07690 Major Facilitator Superfamily DS748_RS08390 PF00701 Dihydrodipicolinate synthetase family DS748_RS08395 PF07729 FCD domain DS748_RS08395 PF00392 Bacterial regulatory proteins, gntR family DS748_RS08400 PF04386 Stringent starvation protein B DS748_RS08405 PF00043 Glutathione S-transferase, C-terminal domain DS748_RS08405 PF02798 Glutathione S-transferase, N-terminal domain DS748_RS08410 PF00380 Ribosomal protein S9/S16 DS748_RS08415 PF00572 Ribosomal protein L13 DS748_RS08420 PF03969 AFG1-like ATPase DS748_RS08425 PF06295 Protein of unknown function (DUF1043) DS748_RS08430 PF13180 PDZ domain DS748_RS08430 PF00595 PDZ domain DS748_RS08435 PF13180 PDZ domain DS748_RS08440 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DS748_RS08445 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DS748_RS08450 PF00682 HMGL-like DS748_RS08450 PF02436 Conserved carboxylase domain DS748_RS08450 PF00364 Biotin-requiring enzyme DS748_RS08455 PF04277 Oxaloacetate decarboxylase, gamma chain DS748_RS08460 PF05683 Fumarase C-terminus DS748_RS08465 PF05681 Fumarate hydratase (Fumerase) DS748_RS08470 PF00939 Sodium:sulfate symporter transmembrane region DS748_RS08480 PF07702 UTRA domain DS748_RS08480 PF00392 Bacterial regulatory proteins, gntR family DS748_RS08485 PF00056 lactate/malate dehydrogenase, NAD binding domain DS748_RS08485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DS748_RS08490 PF02863 Arginine repressor, C-terminal domain DS748_RS08490 PF01316 Arginine repressor, DNA binding domain DS748_RS08495 PF07338 Protein of unknown function (DUF1471) DS748_RS08500 PF07338 Protein of unknown function (DUF1471) DS748_RS08505 PF01337 Barstar (barnase inhibitor) DS748_RS08510 PF04632 Fusaric acid resistance protein family DS748_RS08515 PF13533 Biotin-lipoyl like DS748_RS08520 PF07869 Protein of unknown function (DUF1656) DS748_RS08525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS08525 PF03466 LysR substrate binding domain DS748_RS08530 PF01523 Putative modulator of DNA gyrase DS748_RS08535 PF13116 Protein of unknown function DS748_RS08535 PF13502 AsmA-like C-terminal region DS748_RS08540 PF00575 S1 RNA binding domain DS748_RS08540 PF10150 Ribonuclease E/G family DS748_RS08545 PF02545 Maf-like protein DS748_RS08550 PF04093 rod shape-determining protein MreD DS748_RS08555 PF04085 rod shape-determining protein MreC DS748_RS08570 PF00563 EAL domain DS748_RS08570 PF17157 Gammaproteobacterial periplasmic sensor domain DS748_RS08570 PF00990 Diguanylate cyclase, GGDEF domain DS748_RS08575 PF08240 Alcohol dehydrogenase GroES-like domain DS748_RS08575 PF00107 Zinc-binding dehydrogenase DS748_RS08580 PF00174 Oxidoreductase molybdopterin binding domain DS748_RS08585 PF01794 Ferric reductase like transmembrane component DS748_RS08590 PF00364 Biotin-requiring enzyme DS748_RS08595 PF02785 Biotin carboxylase C-terminal domain DS748_RS08595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DS748_RS08595 PF00289 Biotin carboxylase, N-terminal domain DS748_RS08600 PF06196 Protein of unknown function (DUF997) DS748_RS08605 PF00474 Sodium:solute symporter family DS748_RS08615 PF01207 Dihydrouridine synthase (Dus) DS748_RS08620 PF02954 Bacterial regulatory protein, Fis family DS748_RS08625 PF01555 DNA methylase DS748_RS08630 PF10831 Protein of unknown function (DUF2556) DS748_RS08685 PF00132 Bacterial transferase hexapeptide (six repeats) DS748_RS08690 PF07369 Protein of unknown function (DUF1488) DS748_RS08695 PF08501 Shikimate dehydrogenase substrate binding domain DS748_RS08695 PF01488 Shikimate / quinate 5-dehydrogenase DS748_RS08695 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DS748_RS08700 PF01300 Telomere recombination DS748_RS08705 PF01396 Topoisomerase DNA binding C4 zinc finger DS748_RS08710 PF04361 Protein of unknown function (DUF494) DS748_RS08715 PF02481 DNA recombination-mediator protein A DS748_RS08715 PF17782 DprA winged helix domain DS748_RS08720 PF01327 Polypeptide deformylase DS748_RS08725 PF02911 Formyl transferase, C-terminal domain DS748_RS08725 PF00551 Formyl transferase DS748_RS08730 PF01189 16S rRNA methyltransferase RsmB/F DS748_RS08730 PF01029 NusB family DS748_RS08735 PF02254 TrkA-N domain DS748_RS08735 PF02080 TrkA-C domain DS748_RS08740 PF01741 Large-conductance mechanosensitive channel, MscL DS748_RS08745 PF03889 Alternative ribosome-rescue factor A DS748_RS08750 PF13411 MerR HTH family regulatory protein DS748_RS08755 PF09350 Domain of unknown function (DUF1992) DS748_RS08760 PF01196 Ribosomal protein L17 DS748_RS08765 PF01000 RNA polymerase Rpb3/RpoA insert domain DS748_RS08765 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DS748_RS08765 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DS748_RS08770 PF00163 Ribosomal protein S4/S9 N-terminal domain DS748_RS08770 PF01479 S4 domain DS748_RS08775 PF00411 Ribosomal protein S11 DS748_RS08780 PF00416 Ribosomal protein S13/S18 DS748_RS08785 PF00444 Ribosomal protein L36 DS748_RS08790 PF00344 SecY translocase DS748_RS08795 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DS748_RS08800 PF00327 Ribosomal protein L30p/L7e DS748_RS08805 PF00333 Ribosomal protein S5, N-terminal domain DS748_RS08805 PF03719 Ribosomal protein S5, C-terminal domain DS748_RS08810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DS748_RS08815 PF00347 Ribosomal protein L6 DS748_RS08820 PF00410 Ribosomal protein S8 DS748_RS08825 PF00253 Ribosomal protein S14p/S29e DS748_RS08830 PF00673 ribosomal L5P family C-terminus DS748_RS08830 PF00281 Ribosomal protein L5 DS748_RS08835 PF00467 KOW motif DS748_RS08835 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DS748_RS08840 PF00238 Ribosomal protein L14p/L23e DS748_RS08845 PF00366 Ribosomal protein S17 DS748_RS08850 PF00831 Ribosomal L29 protein DS748_RS08855 PF00252 Ribosomal protein L16p/L10e DS748_RS08860 PF00189 Ribosomal protein S3, C-terminal domain DS748_RS08860 PF07650 KH domain DS748_RS08865 PF00237 Ribosomal protein L22p/L17e DS748_RS08870 PF00203 Ribosomal protein S19 DS748_RS08875 PF00181 Ribosomal Proteins L2, RNA binding domain DS748_RS08875 PF03947 Ribosomal Proteins L2, C-terminal domain DS748_RS08880 PF00276 Ribosomal protein L23 DS748_RS08885 PF00573 Ribosomal protein L4/L1 family DS748_RS08890 PF00297 Ribosomal protein L3 DS748_RS08895 PF00338 Ribosomal protein S10p/S20e DS748_RS08900 PF01478 Type IV leader peptidase family DS748_RS08905 PF00210 Ferritin-like domain DS748_RS08910 PF04324 BFD-like [2Fe-2S] binding domain DS748_RS08915 PF03143 Elongation factor Tu C-terminal domain DS748_RS08915 PF00009 Elongation factor Tu GTP binding domain DS748_RS08915 PF03144 Elongation factor Tu domain 2 DS748_RS08920 PF03764 Elongation factor G, domain IV DS748_RS08920 PF00679 Elongation factor G C-terminus DS748_RS08920 PF03144 Elongation factor Tu domain 2 DS748_RS08920 PF00009 Elongation factor Tu GTP binding domain DS748_RS08920 PF14492 Elongation Factor G, domain II DS748_RS08925 PF00177 Ribosomal protein S7p/S5e DS748_RS08930 PF00164 Ribosomal protein S12/S23 DS748_RS08935 PF04077 DsrH like protein DS748_RS08940 PF02635 DsrE/DsrF-like family DS748_RS08945 PF02635 DsrE/DsrF-like family DS748_RS08950 PF08348 YheO-like PAS domain DS748_RS08950 PF13309 HTH domain DS748_RS08955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DS748_RS08955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS748_RS08960 PF04102 SlyX DS748_RS08965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS748_RS08970 PF09526 Probable metal-binding protein (DUF2387) DS748_RS08975 PF00999 Sodium/hydrogen exchanger family DS748_RS08975 PF02254 TrkA-N domain DS748_RS08980 PF02525 Flavodoxin-like fold DS748_RS08985 PF00005 ABC transporter DS748_RS08985 PF12848 ABC transporter DS748_RS08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS08990 PF03466 LysR substrate binding domain DS748_RS08995 PF08803 Putative mono-oxygenase ydhR DS748_RS09005 PF06794 Uncharacterised protein family (UPF0270) DS748_RS09010 PF00485 Phosphoribulokinase / Uridine kinase family DS748_RS09015 PF02566 OsmC-like protein DS748_RS09020 PF13545 Crp-like helix-turn-helix domain DS748_RS09020 PF00027 Cyclic nucleotide-binding domain DS748_RS09030 PF00202 Aminotransferase class-III DS748_RS09035 PF00117 Glutamine amidotransferase class-I DS748_RS09040 PF02661 Fic/DOC family DS748_RS09045 PF10832 Protein of unknown function (DUF2559) DS748_RS09050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DS748_RS09055 PF07690 Major Facilitator Superfamily DS748_RS09060 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS09060 PF18267 Rubredoxin NAD+ reductase C-terminal domain DS748_RS09060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DS748_RS09060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DS748_RS09060 PF04324 BFD-like [2Fe-2S] binding domain DS748_RS09065 PF13806 Rieske-like [2Fe-2S] domain DS748_RS09070 PF01226 Formate/nitrite transporter DS748_RS09075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DS748_RS09075 PF14824 Sirohaem biosynthesis protein central DS748_RS09075 PF10414 Sirohaem synthase dimerisation region DS748_RS09095 PF13978 Protein of unknown function (DUF4223) DS748_RS09100 PF00579 tRNA synthetases class I (W and Y) DS748_RS09105 PF13419 Haloacid dehalogenase-like hydrolase DS748_RS09110 PF00834 Ribulose-phosphate 3 epimerase family DS748_RS09115 PF02086 D12 class N6 adenine-specific DNA methyltransferase DS748_RS09120 PF05036 Sporulation related domain DS748_RS09125 PF01761 3-dehydroquinate synthase DS748_RS09130 PF01202 Shikimate kinase DS748_RS09140 PF00263 Bacterial type II and III secretion system protein DS748_RS09140 PF03958 Bacterial type II/III secretion system short domain DS748_RS09145 PF10748 DNA utilization proteins HofP DS748_RS09155 PF05137 Fimbrial assembly protein (PilN) DS748_RS09165 PF00905 Penicillin binding protein transpeptidase domain DS748_RS09165 PF00912 Transglycosylase DS748_RS09165 PF17092 Penicillin-binding protein OB-like domain DS748_RS09170 PF00293 NUDIX domain DS748_RS09175 PF07095 Intracellular growth attenuator protein IgaA DS748_RS09180 PF13419 Haloacid dehalogenase-like hydrolase DS748_RS09185 PF01479 S4 domain DS748_RS09190 PF01430 Hsp33 protein DS748_RS09195 PF13687 Domain of unknown function (DUF4153) DS748_RS09200 PF01293 Phosphoenolpyruvate carboxykinase DS748_RS09205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS09205 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS09205 PF00672 HAMP domain DS748_RS09210 PF00486 Transcriptional regulatory protein, C terminal DS748_RS09210 PF00072 Response regulator receiver domain DS748_RS09215 PF01272 Transcription elongation factor, GreA/GreB, C-term DS748_RS09215 PF03449 Transcription elongation factor, N-terminal DS748_RS09220 PF00575 S1 RNA binding domain DS748_RS09220 PF09371 Tex-like protein N-terminal domain DS748_RS09220 PF16921 Tex protein YqgF-like domain DS748_RS09220 PF17674 HHH domain DS748_RS09225 PF04023 FeoA domain DS748_RS09230 PF07664 Ferrous iron transport protein B C terminus DS748_RS09230 PF17910 FeoB cytosolic helical domain DS748_RS09230 PF02421 Ferrous iron transport protein B DS748_RS09230 PF07670 Nucleoside recognition DS748_RS09235 PF09012 FeoC like transcriptional regulator DS748_RS09240 PF04754 Putative transposase, YhgA-like DS748_RS09245 PF00561 alpha/beta hydrolase fold DS748_RS09250 PF00156 Phosphoribosyl transferase domain DS748_RS09255 PF01106 NifU-like domain DS748_RS09255 PF01521 Iron-sulphur cluster biosynthesis DS748_RS09260 PF02447 GntP family permease DS748_RS09265 PF02446 4-alpha-glucanotransferase DS748_RS09270 PF00343 Carbohydrate phosphorylase DS748_RS09275 PF17874 MalT-like TPR region DS748_RS09275 PF00196 Bacterial regulatory proteins, luxR family DS748_RS09280 PF00455 DeoR C terminal sensor domain DS748_RS09280 PF08220 DeoR-like helix-turn-helix domain DS748_RS09285 PF01694 Rhomboid family DS748_RS09285 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DS748_RS09290 PF00581 Rhodanese-like domain DS748_RS09295 PF01266 FAD dependent oxidoreductase DS748_RS09295 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DS748_RS09300 PF00343 Carbohydrate phosphorylase DS748_RS09305 PF00534 Glycosyl transferases group 1 DS748_RS09305 PF08323 Starch synthase catalytic domain DS748_RS09310 PF00483 Nucleotidyl transferase DS748_RS09315 PF00128 Alpha amylase, catalytic domain DS748_RS09315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DS748_RS09315 PF18390 Glycogen debranching enzyme C-terminal domain DS748_RS09320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DS748_RS09320 PF02806 Alpha amylase, C-terminal all-beta domain DS748_RS09320 PF00128 Alpha amylase, catalytic domain DS748_RS09325 PF02774 Semialdehyde dehydrogenase, dimerisation domain DS748_RS09325 PF01118 Semialdehyde dehydrogenase, NAD binding domain DS748_RS09335 PF02447 GntP family permease DS748_RS09340 PF01202 Shikimate kinase DS748_RS09345 PF00356 Bacterial regulatory proteins, lacI family DS748_RS09345 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DS748_RS09350 PF02678 Pirin DS748_RS09350 PF17954 Quercetinase C-terminal cupin domain DS748_RS09355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DS748_RS09355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DS748_RS09360 PF00583 Acetyltransferase (GNAT) family DS748_RS09365 PF00294 pfkB family carbohydrate kinase DS748_RS09380 PF02126 Phosphotriesterase family DS748_RS09390 PF10956 Protein of unknown function (DUF2756) DS748_RS09395 PF03009 Glycerophosphoryl diester phosphodiesterase family DS748_RS09400 PF00005 ABC transporter DS748_RS09400 PF17912 MalK OB fold domain DS748_RS09405 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS09410 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS09415 PF13416 Bacterial extracellular solute-binding protein DS748_RS09430 PF00005 ABC transporter DS748_RS09435 PF00005 ABC transporter DS748_RS09435 PF12399 Branched-chain amino acid ATP-binding cassette transporter DS748_RS09440 PF02653 Branched-chain amino acid transport system / permease component DS748_RS09440 PF11862 Domain of unknown function (DUF3382) DS748_RS09445 PF02653 Branched-chain amino acid transport system / permease component DS748_RS09450 PF13458 Periplasmic binding protein DS748_RS09455 PF12568 Acetyltransferase (GNAT) domain, PanZ DS748_RS09470 PF04542 Sigma-70 region 2 DS748_RS09470 PF04545 Sigma-70, region 4 DS748_RS09475 PF02687 FtsX-like permease family DS748_RS09475 PF18075 FtsX extracellular domain DS748_RS09480 PF00005 ABC transporter DS748_RS09485 PF02881 SRP54-type protein, helical bundle domain DS748_RS09485 PF00448 SRP54-type protein, GTPase domain DS748_RS09495 PF06611 Protein of unknown function (DUF1145) DS748_RS09500 PF10694 Protein of unknown function (DUF2500) DS748_RS09505 PF07947 YhhN family DS748_RS09510 PF00403 Heavy-metal-associated domain DS748_RS09515 PF00672 HAMP domain DS748_RS09515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS748_RS09515 PF02203 Tar ligand binding domain homologue DS748_RS09520 PF01206 Sulfurtransferase TusA DS748_RS09525 PF02592 Putative vitamin uptake transporter DS748_RS09530 PF08786 DcrB DS748_RS09535 PF07690 Major Facilitator Superfamily DS748_RS09540 PF01594 AI-2E family transporter DS748_RS09545 PF01648 4'-phosphopantetheinyl transferase superfamily DS748_RS09550 PF01402 Ribbon-helix-helix protein, copG family DS748_RS09550 PF08753 NikR C terminal nickel binding domain DS748_RS09560 PF00005 ABC transporter DS748_RS09565 PF13533 Biotin-lipoyl like DS748_RS09570 PF07690 Major Facilitator Superfamily DS748_RS09580 PF01042 Endoribonuclease L-PSP DS748_RS09590 PF07690 Major Facilitator Superfamily DS748_RS09600 PF01384 Phosphate transporter family DS748_RS09605 PF10625 Universal stress protein B (UspB) DS748_RS09610 PF00582 Universal stress protein family DS748_RS09615 PF00854 POT family DS748_RS09620 PF04445 Putative SAM-dependent methyltransferase DS748_RS09625 PF01432 Peptidase family M3 DS748_RS09640 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DS748_RS09645 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS09645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DS748_RS09655 PF01380 SIS domain DS748_RS09660 PF07702 UTRA domain DS748_RS09660 PF00392 Bacterial regulatory proteins, gntR family DS748_RS09665 PF01204 Trehalase DS748_RS09680 PF00196 Bacterial regulatory proteins, luxR family DS748_RS09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS09685 PF03466 LysR substrate binding domain DS748_RS09690 PF03631 Virulence factor BrkB DS748_RS09695 PF07690 Major Facilitator Superfamily DS748_RS09695 PF00083 Sugar (and other) transporter DS748_RS09700 PF05170 AsmA family DS748_RS09705 PF00563 EAL domain DS748_RS09710 PF00294 pfkB family carbohydrate kinase DS748_RS09715 PF00675 Insulinase (Peptidase family M16) DS748_RS09715 PF05193 Peptidase M16 inactive domain DS748_RS09720 PF00375 Sodium:dicarboxylate symporter family DS748_RS09725 PF00672 HAMP domain DS748_RS09725 PF00563 EAL domain DS748_RS09725 PF00990 Diguanylate cyclase, GGDEF domain DS748_RS09725 PF17154 Gammaproteobacterial periplasmic sensor domain DS748_RS09740 PF01270 Glycosyl hydrolases family 8 DS748_RS09745 PF03170 Bacterial cellulose synthase subunit DS748_RS09750 PF00535 Glycosyl transferase family 2 DS748_RS09750 PF03552 Cellulose synthase DS748_RS09750 PF07238 PilZ domain DS748_RS09755 PF06564 Cellulose biosynthesis protein BcsQ DS748_RS09760 PF10945 Cellulose biosynthesis protein BcsR DS748_RS09765 PF10995 Cellulose biosynthesis GIL DS748_RS09770 PF11120 Cellulose biosynthesis protein BcsF DS748_RS09775 PF11658 Cellulose biosynthesis protein BcsG DS748_RS09780 PF13940 Toxin Ldr, type I toxin-antitoxin system DS748_RS09790 PF03222 Tryptophan/tyrosine permease family DS748_RS09795 PF00005 ABC transporter DS748_RS09795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DS748_RS09800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DS748_RS09800 PF00005 ABC transporter DS748_RS09805 PF12911 N-terminal TM domain of oligopeptide transport permease C DS748_RS09805 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS09810 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS09815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS748_RS09830 PF00356 Bacterial regulatory proteins, lacI family DS748_RS09845 PF00884 Sulfatase DS748_RS09845 PF08019 Phosphoethanolamine transferase EptA/EptB DS748_RS09850 PF03797 Autotransporter beta-domain DS748_RS09855 PF03352 Methyladenine glycosylase DS748_RS09860 PF00583 Acetyltransferase (GNAT) family DS748_RS09865 PF00384 Molybdopterin oxidoreductase DS748_RS09865 PF01568 Molydopterin dinucleotide binding domain DS748_RS09865 PF18364 Molybdopterin oxidoreductase N-terminal domain DS748_RS09870 PF13488 Glycine zipper DS748_RS09870 PF00691 OmpA family DS748_RS09875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS748_RS09875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DS748_RS09880 PF11254 Protein of unknown function (DUF3053) DS748_RS09885 PF01381 Helix-turn-helix DS748_RS09890 PF00313 'Cold-shock' DNA-binding domain DS748_RS09915 PF00665 Integrase core domain DS748_RS09915 PF13333 Integrase core domain DS748_RS09915 PF13276 HTH-like domain DS748_RS09920 PF05746 DALR anticodon binding domain DS748_RS09920 PF02092 Glycyl-tRNA synthetase beta subunit DS748_RS09925 PF02091 Glycyl-tRNA synthetase alpha subunit DS748_RS09930 PF13983 YsaB-like lipoprotein DS748_RS09945 PF05360 yiaA/B two helix domain DS748_RS09950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DS748_RS09950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DS748_RS09965 PF12833 Helix-turn-helix domain DS748_RS09970 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DS748_RS09975 PF00128 Alpha amylase, catalytic domain DS748_RS09980 PF00155 Aminotransferase class I and II DS748_RS09985 PF13247 4Fe-4S dicluster domain DS748_RS09990 PF09339 IclR helix-turn-helix domain DS748_RS09990 PF01614 Bacterial transcriptional regulator DS748_RS09995 PF02615 Malate/L-lactate dehydrogenase DS748_RS10000 PF04074 YhcH/YjgK/YiaL DS748_RS10005 PF16154 Domain of unknown function (DUF4862) DS748_RS10010 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DS748_RS10015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DS748_RS10020 PF03480 Bacterial extracellular solute-binding protein, family 7 DS748_RS10025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DS748_RS10025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DS748_RS10030 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DS748_RS10035 PF01261 Xylose isomerase-like TIM barrel DS748_RS10040 PF00596 Class II Aldolase and Adducin N-terminal domain DS748_RS10050 PF07944 Beta-L-arabinofuranosidase, GH127 DS748_RS10055 PF00171 Aldehyde dehydrogenase family DS748_RS10060 PF00480 ROK family DS748_RS10065 PF09107 Elongation factor SelB, winged helix DS748_RS10065 PF00009 Elongation factor Tu GTP binding domain DS748_RS10065 PF03144 Elongation factor Tu domain 2 DS748_RS10065 PF09106 Elongation factor SelB, winged helix DS748_RS10070 PF03841 L-seryl-tRNA selenium transferase DS748_RS10070 PF12390 Selenocysteine synthase N terminal DS748_RS10075 PF13417 Glutathione S-transferase, N-terminal domain DS748_RS10075 PF00043 Glutathione S-transferase, C-terminal domain DS748_RS10080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS748_RS10080 PF02378 Phosphotransferase system, EIIC DS748_RS10080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DS748_RS10085 PF01232 Mannitol dehydrogenase Rossmann domain DS748_RS10085 PF08125 Mannitol dehydrogenase C-terminal domain DS748_RS10090 PF05068 Mannitol repressor DS748_RS10100 PF10928 Protein of unknown function (DUF2810) DS748_RS10110 PF11622 Protein of unknown function (DUF3251) DS748_RS10125 PF02652 L-lactate permease DS748_RS10130 PF00392 Bacterial regulatory proteins, gntR family DS748_RS10130 PF07729 FCD domain DS748_RS10135 PF01070 FMN-dependent dehydrogenase DS748_RS10140 PF00588 SpoU rRNA Methylase family DS748_RS10145 PF00356 Bacterial regulatory proteins, lacI family DS748_RS10150 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS748_RS10150 PF13378 Enolase C-terminal domain-like DS748_RS10160 PF06426 Serine acetyltransferase, N-terminal DS748_RS10160 PF00132 Bacterial transferase hexapeptide (six repeats) DS748_RS10165 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DS748_RS10165 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DS748_RS10170 PF02556 Preprotein translocase subunit SecB DS748_RS10175 PF00462 Glutaredoxin DS748_RS10180 PF00581 Rhodanese-like domain DS748_RS10185 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DS748_RS10185 PF01676 Metalloenzyme superfamily DS748_RS10190 PF01551 Peptidase family M23 DS748_RS10195 PF04748 Divergent polysaccharide deacetylase DS748_RS10200 PF00535 Glycosyl transferase family 2 DS748_RS10205 PF00107 Zinc-binding dehydrogenase DS748_RS10205 PF08240 Alcohol dehydrogenase GroES-like domain DS748_RS10210 PF00155 Aminotransferase class I and II DS748_RS10215 PF01370 NAD dependent epimerase/dehydratase family DS748_RS10220 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DS748_RS10225 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DS748_RS10230 PF04932 O-Antigen ligase DS748_RS10235 PF00534 Glycosyl transferases group 1 DS748_RS10245 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) DS748_RS10250 PF08437 Glycosyl transferase family 8 C-terminal DS748_RS10250 PF01501 Glycosyl transferase family 8 DS748_RS10255 PF08437 Glycosyl transferase family 8 C-terminal DS748_RS10255 PF01501 Glycosyl transferase family 8 DS748_RS10260 PF13439 Glycosyltransferase Family 4 DS748_RS10260 PF00534 Glycosyl transferases group 1 DS748_RS10280 PF13439 Glycosyltransferase Family 4 DS748_RS10280 PF00534 Glycosyl transferases group 1 DS748_RS10285 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DS748_RS10290 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DS748_RS10295 PF01467 Cytidylyltransferase-like DS748_RS10300 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DS748_RS10300 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DS748_RS10300 PF06827 Zinc finger found in FPG and IleRS DS748_RS10305 PF00471 Ribosomal protein L33 DS748_RS10310 PF00830 Ribosomal L28 family DS748_RS10315 PF04002 RadC-like JAB domain DS748_RS10320 PF04127 DNA / pantothenate metabolism flavoprotein DS748_RS10320 PF02441 Flavoprotein DS748_RS10325 PF00692 dUTPase DS748_RS10330 PF00440 Bacterial regulatory proteins, tetR family DS748_RS10335 PF00156 Phosphoribosyl transferase domain DS748_RS10340 PF01138 3' exoribonuclease family, domain 1 DS748_RS10340 PF03725 3' exoribonuclease family, domain 2 DS748_RS10345 PF08340 Domain of unknown function (DUF1732) DS748_RS10345 PF03755 YicC-like family, N-terminal region DS748_RS10350 PF03466 LysR substrate binding domain DS748_RS10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS10360 PF03458 UPF0126 domain DS748_RS10370 PF00625 Guanylate kinase DS748_RS10375 PF01192 RNA polymerase Rpb6 DS748_RS10380 PF04607 Region found in RelA / SpoT proteins DS748_RS10380 PF13291 ACT domain DS748_RS10380 PF02824 TGS domain DS748_RS10385 PF12105 SpoU, rRNA methylase, C-terminal DS748_RS10385 PF00588 SpoU rRNA Methylase family DS748_RS10390 PF17191 RecG wedge domain DS748_RS10390 PF00270 DEAD/DEAH box helicase DS748_RS10390 PF00271 Helicase conserved C-terminal domain DS748_RS10395 PF03616 Sodium/glutamate symporter DS748_RS10400 PF00860 Permease family DS748_RS10405 PF05170 AsmA family DS748_RS10410 PF01055 Glycosyl hydrolases family 31 DS748_RS10410 PF13802 Galactose mutarotase-like DS748_RS10450 PF00196 Bacterial regulatory proteins, luxR family DS748_RS10475 PF00857 Isochorismatase family DS748_RS10490 PF00690 Cation transporter/ATPase, N-terminus DS748_RS10490 PF00689 Cation transporting ATPase, C-terminus DS748_RS10495 PF02308 MgtC family DS748_RS10500 PF00892 EamA-like transporter family DS748_RS10505 PF04754 Putative transposase, YhgA-like DS748_RS10510 PF07071 KDGP aldolase DS748_RS10515 PF03841 L-seryl-tRNA selenium transferase DS748_RS10520 PF03613 PTS system mannose/fructose/sorbose family IID component DS748_RS10525 PF03609 PTS system sorbose-specific iic component DS748_RS10530 PF03610 PTS system fructose IIA component DS748_RS10530 PF03830 PTS system sorbose subfamily IIB component DS748_RS10540 PF00158 Sigma-54 interaction domain DS748_RS10540 PF00874 PRD domain DS748_RS10545 PF00158 Sigma-54 interaction domain DS748_RS10545 PF00874 PRD domain DS748_RS10555 PF00232 Glycosyl hydrolase family 1 DS748_RS10560 PF07690 Major Facilitator Superfamily DS748_RS10590 PF03611 PTS system sugar-specific permease component DS748_RS10595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DS748_RS10605 PF07702 UTRA domain DS748_RS10605 PF00392 Bacterial regulatory proteins, gntR family DS748_RS10610 PF06711 Protein of unknown function (DUF1198) DS748_RS10615 PF07690 Major Facilitator Superfamily DS748_RS10620 PF07690 Major Facilitator Superfamily DS748_RS10625 PF05231 MASE1 DS748_RS10625 PF07730 Histidine kinase DS748_RS10625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS10630 PF00072 Response regulator receiver domain DS748_RS10630 PF00196 Bacterial regulatory proteins, luxR family DS748_RS10640 PF07690 Major Facilitator Superfamily DS748_RS10645 PF00294 pfkB family carbohydrate kinase DS748_RS10650 PF08220 DeoR-like helix-turn-helix domain DS748_RS10650 PF00455 DeoR C terminal sensor domain DS748_RS10655 PF01842 ACT domain DS748_RS10660 PF00205 Thiamine pyrophosphate enzyme, central domain DS748_RS10660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DS748_RS10660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS748_RS10665 PF08049 IlvB leader peptide DS748_RS10675 PF13939 Toxin TisB, type I toxin-antitoxin system DS748_RS10685 PF07690 Major Facilitator Superfamily DS748_RS10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS10695 PF03466 LysR substrate binding domain DS748_RS10700 PF02447 GntP family permease DS748_RS10705 PF00291 Pyridoxal-phosphate dependent enzyme DS748_RS10715 PF02656 Domain of unknown function (DUF202) DS748_RS10725 PF06826 Predicted Permease Membrane Region DS748_RS10725 PF02080 TrkA-C domain DS748_RS10730 PF00011 Hsp20/alpha crystallin family DS748_RS10735 PF00011 Hsp20/alpha crystallin family DS748_RS10740 PF07119 Protein of unknown function (DUF1375) DS748_RS10745 PF07676 WD40-like Beta Propeller Repeat DS748_RS10745 PF12566 Protein of unknown function (DUF3748) DS748_RS10750 PF03918 Cytochrome C biogenesis protein DS748_RS10755 PF08534 Redoxin DS748_RS10760 PF01578 Cytochrome C assembly protein DS748_RS10760 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DS748_RS10765 PF03100 CcmE DS748_RS10770 PF04995 Heme exporter protein D (CcmD) DS748_RS10775 PF01578 Cytochrome C assembly protein DS748_RS10780 PF03379 CcmB protein DS748_RS10785 PF00005 ABC transporter DS748_RS10790 PF14376 Haem-binding domain DS748_RS10790 PF00034 Cytochrome c DS748_RS10790 PF03150 Di-haem cytochrome c peroxidase DS748_RS10795 PF02613 Nitrate reductase delta subunit DS748_RS10800 PF18364 Molybdopterin oxidoreductase N-terminal domain DS748_RS10800 PF01568 Molydopterin dinucleotide binding domain DS748_RS10800 PF00384 Molybdopterin oxidoreductase DS748_RS10805 PF03264 NapC/NirT cytochrome c family, N-terminal region DS748_RS10815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DS748_RS10820 PF01627 Hpt domain DS748_RS10820 PF00072 Response regulator receiver domain DS748_RS10820 PF00672 HAMP domain DS748_RS10820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS10820 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS10845 PF07690 Major Facilitator Superfamily DS748_RS10850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS748_RS10850 PF13378 Enolase C-terminal domain-like DS748_RS10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS10855 PF03466 LysR substrate binding domain DS748_RS10860 PF00986 DNA gyrase B subunit, carboxyl terminus DS748_RS10860 PF01751 Toprim domain DS748_RS10860 PF18053 DNA gyrase B subunit insert domain DS748_RS10860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS10860 PF00204 DNA gyrase B DS748_RS10865 PF02463 RecF/RecN/SMC N terminal domain DS748_RS10870 PF00712 DNA polymerase III beta subunit, N-terminal domain DS748_RS10870 PF02768 DNA polymerase III beta subunit, C-terminal domain DS748_RS10870 PF02767 DNA polymerase III beta subunit, central domain DS748_RS10875 PF11638 DnaA N-terminal domain DS748_RS10875 PF08299 Bacterial dnaA protein helix-turn-helix DS748_RS10875 PF00308 Bacterial dnaA protein DS748_RS10880 PF00468 Ribosomal protein L34 DS748_RS10885 PF00825 Ribonuclease P DS748_RS10890 PF01809 Putative membrane protein insertion efficiency factor DS748_RS10895 PF14849 YidC periplasmic domain DS748_RS10895 PF02096 60Kd inner membrane protein DS748_RS10900 PF10396 GTP-binding protein TrmE N-terminus DS748_RS10900 PF12631 MnmE helical domain DS748_RS10900 PF01926 50S ribosome-binding GTPase DS748_RS10905 PF07690 Major Facilitator Superfamily DS748_RS10910 PF03466 LysR substrate binding domain DS748_RS10910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS10920 PF03358 NADPH-dependent FMN reductase DS748_RS10925 PF00860 Permease family DS748_RS10930 PF13419 Haloacid dehalogenase-like hydrolase DS748_RS10935 PF01895 PhoU domain DS748_RS10940 PF00005 ABC transporter DS748_RS10945 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS10950 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS10955 PF12849 PBP superfamily domain DS748_RS10960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DS748_RS10960 PF02378 Phosphotransferase system, EIIC DS748_RS10965 PF08501 Shikimate dehydrogenase substrate binding domain DS748_RS10970 PF12793 Sugar transport-related sRNA regulator N-term DS748_RS10970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS748_RS10975 PF00419 Fimbrial protein DS748_RS10985 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS10985 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS10990 PF00419 Fimbrial protein DS748_RS10995 PF01380 SIS domain DS748_RS11000 PF00132 Bacterial transferase hexapeptide (six repeats) DS748_RS11000 PF12804 MobA-like NTP transferase domain DS748_RS11015 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DS748_RS11015 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DS748_RS11020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DS748_RS11020 PF02874 ATP synthase alpha/beta family, beta-barrel domain DS748_RS11025 PF00231 ATP synthase DS748_RS11030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DS748_RS11030 PF02874 ATP synthase alpha/beta family, beta-barrel domain DS748_RS11030 PF00306 ATP synthase alpha/beta chain, C terminal domain DS748_RS11035 PF00213 ATP synthase delta (OSCP) subunit DS748_RS11040 PF00430 ATP synthase B/B' CF(0) DS748_RS11045 PF00137 ATP synthase subunit C DS748_RS11050 PF00119 ATP synthase A chain DS748_RS11055 PF03899 ATP synthase I chain DS748_RS11060 PF02527 rRNA small subunit methyltransferase G DS748_RS11065 PF13932 GidA associated domain DS748_RS11065 PF01134 Glucose inhibited division protein A DS748_RS11075 PF00258 Flavodoxin DS748_RS11080 PF01037 Lrp/AsnC ligand binding domain DS748_RS11085 PF03590 Aspartate-ammonia ligase DS748_RS11090 PF05762 VWA domain containing CoxE-like protein DS748_RS11095 PF17868 AAA lid domain DS748_RS11095 PF07728 AAA domain (dynein-related subfamily) DS748_RS11095 PF12592 Protein of unknown function (DUF3763) DS748_RS11100 PF02705 K+ potassium transporter DS748_RS11105 PF05025 RbsD / FucU transport protein family DS748_RS11110 PF00005 ABC transporter DS748_RS11115 PF02653 Branched-chain amino acid transport system / permease component DS748_RS11120 PF13407 Periplasmic binding protein domain DS748_RS11125 PF00294 pfkB family carbohydrate kinase DS748_RS11130 PF00356 Bacterial regulatory proteins, lacI family DS748_RS11140 PF07729 FCD domain DS748_RS11140 PF00392 Bacterial regulatory proteins, gntR family DS748_RS11165 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DS748_RS11170 PF12804 MobA-like NTP transferase domain DS748_RS11175 PF06288 Protein of unknown function (DUF1040) DS748_RS11180 PF01636 Phosphotransferase enzyme family DS748_RS11185 PF01323 DSBA-like thioredoxin domain DS748_RS11190 PF01553 Acyltransferase DS748_RS11200 PF00476 DNA polymerase family A DS748_RS11200 PF01612 3'-5' exonuclease DS748_RS11200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DS748_RS11200 PF01367 5'-3' exonuclease, C-terminal SAM fold DS748_RS11210 PF01926 50S ribosome-binding GTPase DS748_RS11220 PF04220 Der GTPase activator (YihI) DS748_RS11225 PF04055 Radical SAM superfamily DS748_RS11225 PF06969 HemN C-terminal domain DS748_RS11235 PF00158 Sigma-54 interaction domain DS748_RS11235 PF00072 Response regulator receiver domain DS748_RS11235 PF02954 Bacterial regulatory protein, Fis family DS748_RS11240 PF00989 PAS fold DS748_RS11240 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS11240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS11250 PF03951 Glutamine synthetase, beta-Grasp domain DS748_RS11250 PF00120 Glutamine synthetase, catalytic domain DS748_RS11255 PF00679 Elongation factor G C-terminus DS748_RS11255 PF00009 Elongation factor Tu GTP binding domain DS748_RS11255 PF03144 Elongation factor Tu domain 2 DS748_RS11295 PF06178 Oligogalacturonate-specific porin protein (KdgM) DS748_RS11310 PF01055 Glycosyl hydrolases family 31 DS748_RS11325 PF01791 DeoC/LacD family aldolase DS748_RS11330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DS748_RS11330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DS748_RS11335 PF00294 pfkB family carbohydrate kinase DS748_RS11340 PF00455 DeoR C terminal sensor domain DS748_RS11340 PF08220 DeoR-like helix-turn-helix domain DS748_RS11345 PF13419 Haloacid dehalogenase-like hydrolase DS748_RS11350 PF03631 Virulence factor BrkB DS748_RS11355 PF02580 D-Tyr-tRNA(Tyr) deacylase DS748_RS11360 PF00583 Acetyltransferase (GNAT) family DS748_RS11360 PF09500 Putative thioesterase (yiiD_Cterm) DS748_RS11365 PF01381 Helix-turn-helix DS748_RS11370 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system DS748_RS11375 PF07859 alpha/beta hydrolase fold DS748_RS11390 PF04216 Protein involved in formate dehydrogenase formation DS748_RS11395 PF01292 Prokaryotic cytochrome b561 DS748_RS11400 PF09163 Formate dehydrogenase N, transmembrane DS748_RS11400 PF13247 4Fe-4S dicluster domain DS748_RS11410 PF02634 FdhD/NarQ family DS748_RS11415 PF12889 Protein of unknown function (DUF3829) DS748_RS11420 PF12889 Protein of unknown function (DUF3829) DS748_RS11430 PF03591 AzlC protein DS748_RS11440 PF05336 L-rhamnose mutarotase DS748_RS11445 PF00465 Iron-containing alcohol dehydrogenase DS748_RS11455 PF06134 L-rhamnose isomerase (RhaA) DS748_RS11460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DS748_RS11460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DS748_RS11465 PF02311 AraC-like ligand binding domain DS748_RS11465 PF12833 Helix-turn-helix domain DS748_RS11470 PF02311 AraC-like ligand binding domain DS748_RS11470 PF12833 Helix-turn-helix domain DS748_RS11475 PF06379 L-rhamnose-proton symport protein (RhaT) DS748_RS11480 PF06178 Oligogalacturonate-specific porin protein (KdgM) DS748_RS11485 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DS748_RS11490 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DS748_RS11500 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DS748_RS11500 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DS748_RS11505 PF03473 MOSC domain DS748_RS11505 PF03475 3-alpha domain DS748_RS11515 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS11515 PF16527 Two-component sensor protein CpxA, periplasmic domain DS748_RS11515 PF00672 HAMP domain DS748_RS11515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS11520 PF00486 Transcriptional regulatory protein, C terminal DS748_RS11520 PF00072 Response regulator receiver domain DS748_RS11525 PF07813 LTXXQ motif family protein DS748_RS11530 PF16916 Dimerisation domain of Zinc Transporter DS748_RS11530 PF01545 Cation efflux family DS748_RS11535 PF00365 Phosphofructokinase DS748_RS11545 PF02611 CDP-diacylglycerol pyrophosphatase DS748_RS11555 PF00294 pfkB family carbohydrate kinase DS748_RS11565 PF00155 Aminotransferase class I and II DS748_RS11565 PF00392 Bacterial regulatory proteins, gntR family DS748_RS11575 PF02611 CDP-diacylglycerol pyrophosphatase DS748_RS11585 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DS748_RS11585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DS748_RS11590 PF04198 Putative sugar-binding domain DS748_RS11595 PF00005 ABC transporter DS748_RS11600 PF02653 Branched-chain amino acid transport system / permease component DS748_RS11605 PF02653 Branched-chain amino acid transport system / permease component DS748_RS11610 PF13407 Periplasmic binding protein domain DS748_RS11615 PF01791 DeoC/LacD family aldolase DS748_RS11620 PF03992 Antibiotic biosynthesis monooxygenase DS748_RS11625 PF00834 Ribulose-phosphate 3 epimerase family DS748_RS11630 PF00121 Triosephosphate isomerase DS748_RS11635 PF07305 Protein of unknown function (DUF1454) DS748_RS11640 PF05656 Protein of unknown function (DUF805) DS748_RS11645 PF00970 Oxidoreductase FAD-binding domain DS748_RS11645 PF00175 Oxidoreductase NAD-binding domain DS748_RS11650 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DS748_RS11655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DS748_RS11655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DS748_RS11660 PF00230 Major intrinsic protein DS748_RS11665 PF06005 Cell division protein ZapB DS748_RS11675 PF03737 Aldolase/RraA DS748_RS11680 PF01040 UbiA prenyltransferase family DS748_RS11685 PF00004 ATPase family associated with various cellular activities (AAA) DS748_RS11685 PF10431 C-terminal, D2-small domain, of ClpB protein DS748_RS11685 PF07724 AAA domain (Cdc48 subfamily) DS748_RS11690 PF00227 Proteasome subunit DS748_RS11695 PF05036 Sporulation related domain DS748_RS11700 PF00356 Bacterial regulatory proteins, lacI family DS748_RS11705 PF00271 Helicase conserved C-terminal domain DS748_RS11705 PF17764 3′ DNA-binding domain (3′BD) DS748_RS11705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DS748_RS11705 PF18074 Primosomal protein N C-terminal domain DS748_RS11705 PF00270 DEAD/DEAH box helicase DS748_RS11710 PF01197 Ribosomal protein L31 DS748_RS11725 PF01340 Met Apo-repressor, MetJ DS748_RS11730 PF01053 Cys/Met metabolism PLP-dependent enzyme DS748_RS11735 PF00742 Homoserine dehydrogenase DS748_RS11735 PF00696 Amino acid kinase family DS748_RS11735 PF03447 Homoserine dehydrogenase, NAD binding domain DS748_RS11750 PF00149 Calcineurin-like phosphoesterase DS748_RS11750 PF17936 Bacterial Ig domain DS748_RS11750 PF02872 5'-nucleotidase, C-terminal domain DS748_RS11755 PF00464 Serine hydroxymethyltransferase DS748_RS11760 PF01168 Alanine racemase, N-terminal domain DS748_RS11760 PF00842 Alanine racemase, C-terminal domain DS748_RS11765 PF00392 Bacterial regulatory proteins, gntR family DS748_RS11765 PF00155 Aminotransferase class I and II DS748_RS11775 PF02219 Methylenetetrahydrofolate reductase DS748_RS11780 PF00141 Peroxidase DS748_RS11785 PF00465 Iron-containing alcohol dehydrogenase DS748_RS11790 PF00923 Transaldolase/Fructose-6-phosphate aldolase DS748_RS11795 PF12833 Helix-turn-helix domain DS748_RS11800 PF00884 Sulfatase DS748_RS11805 PF00311 Phosphoenolpyruvate carboxylase DS748_RS11815 PF01546 Peptidase family M20/M25/M40 DS748_RS11815 PF07687 Peptidase dimerisation domain DS748_RS11820 PF01118 Semialdehyde dehydrogenase, NAD binding domain DS748_RS11820 PF02774 Semialdehyde dehydrogenase, dimerisation domain DS748_RS11825 PF00696 Amino acid kinase family DS748_RS11830 PF00206 Lyase DS748_RS11830 PF14698 Argininosuccinate lyase C-terminal DS748_RS11840 PF03466 LysR substrate binding domain DS748_RS11840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS11845 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS11845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DS748_RS11850 PF00440 Bacterial regulatory proteins, tetR family DS748_RS11855 PF07226 Protein of unknown function (DUF1422) DS748_RS11860 PF05958 tRNA (Uracil-5-)-methyltransferase DS748_RS11865 PF07715 TonB-dependent Receptor Plug Domain DS748_RS11865 PF00593 TonB dependent receptor DS748_RS11870 PF01177 Asp/Glu/Hydantoin racemase DS748_RS11900 PF01565 FAD binding domain DS748_RS11900 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DS748_RS11905 PF02237 Biotin protein ligase C terminal domain DS748_RS11905 PF03099 Biotin/lipoate A/B protein ligase family DS748_RS11905 PF08279 HTH domain DS748_RS11910 PF00485 Phosphoribulokinase / Uridine kinase family DS748_RS11940 PF03144 Elongation factor Tu domain 2 DS748_RS11940 PF00009 Elongation factor Tu GTP binding domain DS748_RS11940 PF03143 Elongation factor Tu C-terminal domain DS748_RS11945 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DS748_RS11950 PF02357 Transcription termination factor nusG DS748_RS11950 PF00467 KOW motif DS748_RS11955 PF00298 Ribosomal protein L11, RNA binding domain DS748_RS11955 PF03946 Ribosomal protein L11, N-terminal domain DS748_RS11960 PF00687 Ribosomal protein L1p/L10e family DS748_RS11965 PF00466 Ribosomal protein L10 DS748_RS11970 PF00542 Ribosomal protein L7/L12 C-terminal domain DS748_RS11970 PF16320 Ribosomal protein L7/L12 dimerisation domain DS748_RS11975 PF10385 RNA polymerase beta subunit external 1 domain DS748_RS11975 PF04563 RNA polymerase beta subunit DS748_RS11975 PF04561 RNA polymerase Rpb2, domain 2 DS748_RS11975 PF04560 RNA polymerase Rpb2, domain 7 DS748_RS11975 PF00562 RNA polymerase Rpb2, domain 6 DS748_RS11975 PF04565 RNA polymerase Rpb2, domain 3 DS748_RS11980 PF05000 RNA polymerase Rpb1, domain 4 DS748_RS11980 PF04983 RNA polymerase Rpb1, domain 3 DS748_RS11980 PF00623 RNA polymerase Rpb1, domain 2 DS748_RS11980 PF04998 RNA polymerase Rpb1, domain 5 DS748_RS11980 PF04997 RNA polymerase Rpb1, domain 1 DS748_RS12000 PF06968 Biotin and Thiamin Synthesis associated domain DS748_RS12000 PF04055 Radical SAM superfamily DS748_RS12005 PF05690 Thiazole biosynthesis protein ThiG DS748_RS12010 PF02597 ThiS family DS748_RS12015 PF00899 ThiF family DS748_RS12020 PF02581 Thiamine monophosphate synthase DS748_RS12025 PF13667 ThiC-associated domain DS748_RS12025 PF01964 Radical SAM ThiC family DS748_RS12030 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DS748_RS12035 PF09297 NADH pyrophosphatase zinc ribbon domain DS748_RS12035 PF00293 NUDIX domain DS748_RS12040 PF01208 Uroporphyrinogen decarboxylase (URO-D) DS748_RS12045 PF04493 Endonuclease V DS748_RS12050 PF04222 Protein of unknown function (DUF416) DS748_RS12055 PF00216 Bacterial DNA-binding protein DS748_RS12060 PF07356 Protein of unknown function (DUF1481) DS748_RS12065 PF13801 Heavy-metal resistance DS748_RS12070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS12070 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS12075 PF00158 Sigma-54 interaction domain DS748_RS12075 PF00072 Response regulator receiver domain DS748_RS12075 PF02954 Bacterial regulatory protein, Fis family DS748_RS12080 PF02844 Phosphoribosylglycinamide synthetase, N domain DS748_RS12080 PF02843 Phosphoribosylglycinamide synthetase, C domain DS748_RS12080 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DS748_RS12085 PF02142 MGS-like domain DS748_RS12085 PF01808 AICARFT/IMPCHase bienzyme DS748_RS12150 PF04606 Ogr/Delta-like zinc finger DS748_RS12185 PF04984 Phage tail sheath protein subtilisin-like domain DS748_RS12185 PF17482 Phage tail sheath C-terminal domain DS748_RS12190 PF00239 Resolvase, N terminal domain DS748_RS12190 PF02796 Helix-turn-helix domain of resolvase DS748_RS12200 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DS748_RS12205 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DS748_RS12210 PF07484 Phage Tail Collar Domain DS748_RS12330 PF05840 Bacteriophage replication gene A protein (GPA) DS748_RS12335 PF02086 D12 class N6 adenine-specific DNA methyltransferase DS748_RS12340 PF01258 Prokaryotic dksA/traR C4-type zinc finger DS748_RS12350 PF17282 Family of unknown function (DUF5347) DS748_RS12360 PF06892 Phage regulatory protein CII (CP76) DS748_RS12370 PF07022 Bacteriophage CI repressor helix-turn-helix domain DS748_RS12370 PF16452 Bacteriophage CI repressor C-terminal domain DS748_RS12380 PF02899 Phage integrase, N-terminal SAM-like domain DS748_RS12380 PF00589 Phage integrase family DS748_RS12395 PF08046 IlvGEDA operon leader peptide DS748_RS12400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS748_RS12400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DS748_RS12400 PF00205 Thiamine pyrophosphate enzyme, central domain DS748_RS12410 PF01063 Amino-transferase class IV DS748_RS12415 PF00920 Dehydratase family DS748_RS12420 PF00585 C-terminal regulatory domain of Threonine dehydratase DS748_RS12420 PF00291 Pyridoxal-phosphate dependent enzyme DS748_RS12435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS12435 PF03466 LysR substrate binding domain DS748_RS12440 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DS748_RS12440 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DS748_RS12455 PF01048 Phosphorylase superfamily DS748_RS12460 PF04973 Nicotinamide mononucleotide transporter DS748_RS12465 PF00580 UvrD/REP helicase N-terminal domain DS748_RS12465 PF13361 UvrD-like helicase C-terminal domain DS748_RS12470 PF02541 Ppx/GppA phosphatase family DS748_RS12475 PF00271 Helicase conserved C-terminal domain DS748_RS12475 PF00270 DEAD/DEAH box helicase DS748_RS12480 PF00085 Thioredoxin DS748_RS12490 PF07497 Rho termination factor, RNA-binding domain DS748_RS12490 PF07498 Rho termination factor, N-terminal domain DS748_RS12490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DS748_RS12495 PF00953 Glycosyl transferase family 4 DS748_RS12500 PF02706 Chain length determinant protein DS748_RS12505 PF02350 UDP-N-acetylglucosamine 2-epimerase DS748_RS12510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DS748_RS12510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DS748_RS12510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DS748_RS12515 PF16363 GDP-mannose 4,6 dehydratase DS748_RS12520 PF00483 Nucleotidyl transferase DS748_RS12530 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DS748_RS12535 PF01943 Polysaccharide biosynthesis protein DS748_RS12540 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 DS748_RS12545 PF06899 WzyE protein, O-antigen assembly polymerase DS748_RS12550 PF03808 Glycosyl transferase WecB/TagA/CpsF family DS748_RS12555 PF00324 Amino acid permease DS748_RS12580 PF07719 Tetratricopeptide repeat DS748_RS12580 PF07219 HemY protein N-terminus DS748_RS12585 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DS748_RS12590 PF02602 Uroporphyrinogen-III synthase HemD DS748_RS12595 PF03900 Porphobilinogen deaminase, C-terminal domain DS748_RS12595 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DS748_RS12605 PF12633 Adenylate cyclase NT domain DS748_RS12605 PF01295 Adenylate cyclase, class-I DS748_RS12625 PF01491 Frataxin-like domain DS748_RS12640 PF13627 Prokaryotic lipoprotein-attachment site DS748_RS12645 PF01678 Diaminopimelate epimerase DS748_RS12650 PF04340 Protein of unknown function, DUF484 DS748_RS12655 PF00589 Phage integrase family DS748_RS12655 PF02899 Phage integrase, N-terminal SAM-like domain DS748_RS12660 PF13419 Haloacid dehalogenase-like hydrolase DS748_RS12665 PF13361 UvrD-like helicase C-terminal domain DS748_RS12665 PF00580 UvrD/REP helicase N-terminal domain DS748_RS12675 PF01544 CorA-like Mg2+ transporter protein DS748_RS12680 PF10947 Protein of unknown function (DUF2628) DS748_RS12690 PF00892 EamA-like transporter family DS748_RS12695 PF03061 Thioesterase superfamily DS748_RS12700 PF02253 Phospholipase A1 DS748_RS12705 PF00570 HRDC domain DS748_RS12705 PF00271 Helicase conserved C-terminal domain DS748_RS12705 PF00270 DEAD/DEAH box helicase DS748_RS12705 PF09382 RQC domain DS748_RS12705 PF16124 RecQ zinc-binding DS748_RS12710 PF01810 LysE type translocator DS748_RS12715 PF01810 LysE type translocator DS748_RS12720 PF12146 Serine aminopeptidase, S33 DS748_RS12730 PF00892 EamA-like transporter family DS748_RS12735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS12735 PF03466 LysR substrate binding domain DS748_RS12740 PF01717 Cobalamin-independent synthase, Catalytic domain DS748_RS12740 PF08267 Cobalamin-independent synthase, N-terminal domain DS748_RS12750 PF04055 Radical SAM superfamily DS748_RS12750 PF13186 Iron-sulfur cluster-binding domain DS748_RS12755 PF01738 Dienelactone hydrolase family DS748_RS12760 PF01048 Phosphorylase superfamily DS748_RS12765 PF02646 RmuC family DS748_RS12770 PF01209 ubiE/COQ5 methyltransferase family DS748_RS12775 PF02036 SCP-2 sterol transfer family DS748_RS12780 PF03109 ABC1 family DS748_RS12785 PF02416 mttA/Hcf106 family DS748_RS12795 PF00902 Sec-independent protein translocase protein (TatC) DS748_RS12800 PF01026 TatD related DNase DS748_RS12805 PF02357 Transcription termination factor nusG DS748_RS12810 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DS748_RS12815 PF00970 Oxidoreductase FAD-binding domain DS748_RS12815 PF00175 Oxidoreductase NAD-binding domain DS748_RS12820 PF05935 Arylsulfotransferase (ASST) DS748_RS12820 PF17425 Arylsulfotransferase Ig-like domain DS748_RS12825 PF00108 Thiolase, N-terminal domain DS748_RS12825 PF02803 Thiolase, C-terminal domain DS748_RS12830 PF00378 Enoyl-CoA hydratase/isomerase DS748_RS12830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DS748_RS12830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DS748_RS12840 PF00557 Metallopeptidase family M24 DS748_RS12845 PF01205 Uncharacterized protein family UPF0029 DS748_RS12845 PF09186 Domain of unknown function (DUF1949) DS748_RS12850 PF02386 Cation transport protein DS748_RS12855 PF12724 Flavodoxin domain DS748_RS12880 PF13673 Acetyltransferase (GNAT) domain DS748_RS12885 PF04204 Homoserine O-succinyltransferase DS748_RS12890 PF01274 Malate synthase DS748_RS12895 PF00463 Isocitrate lyase family DS748_RS12900 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DS748_RS12905 PF01614 Bacterial transcriptional regulator DS748_RS12905 PF09339 IclR helix-turn-helix domain DS748_RS12910 PF02310 B12 binding domain DS748_RS12910 PF00809 Pterin binding enzyme DS748_RS12910 PF02965 Vitamin B12 dependent methionine synthase, activation domain DS748_RS12910 PF02607 B12 binding domain DS748_RS12910 PF02574 Homocysteine S-methyltransferase DS748_RS12915 PF02690 Na+/Pi-cotransporter DS748_RS12920 PF03575 Peptidase family S51 DS748_RS12930 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DS748_RS12935 PF01479 S4 domain DS748_RS12935 PF00849 RNA pseudouridylate synthase DS748_RS12940 PF11656 YjbD family (DUF3811) DS748_RS12945 PF08220 DeoR-like helix-turn-helix domain DS748_RS12945 PF00455 DeoR C terminal sensor domain DS748_RS12970 PF01842 ACT domain DS748_RS12970 PF00696 Amino acid kinase family DS748_RS12975 PF00342 Phosphoglucose isomerase DS748_RS12985 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF DS748_RS12990 PF06251 Capsule biosynthesis GfcC DS748_RS12995 PF06082 Exopolysaccharide biosynthesis protein YbjH DS748_RS13000 PF06146 Phosphate-starvation-inducible E DS748_RS13005 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS13010 PF14785 Maltose transport system permease protein MalF P2 domain DS748_RS13010 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS13015 PF01547 Bacterial extracellular solute-binding protein DS748_RS13020 PF17912 MalK OB fold domain DS748_RS13020 PF00005 ABC transporter DS748_RS13025 PF02264 LamB porin DS748_RS13030 PF07148 Maltose operon periplasmic protein precursor (MalM) DS748_RS13035 PF04345 Chorismate lyase DS748_RS13040 PF01040 UbiA prenyltransferase family DS748_RS13045 PF01553 Acyltransferase DS748_RS13050 PF01219 Prokaryotic diacylglycerol kinase DS748_RS13055 PF00717 Peptidase S24-like DS748_RS13055 PF01726 LexA DNA binding domain DS748_RS13060 PF01554 MatE DS748_RS13070 PF05532 CsbD-like DS748_RS13075 PF01475 Ferric uptake regulator family DS748_RS13085 PF01207 Dihydrouridine synthase (Dus) DS748_RS13090 PF09583 Phage shock protein G (Phageshock_PspG) DS748_RS13095 PF00107 Zinc-binding dehydrogenase DS748_RS13095 PF08240 Alcohol dehydrogenase GroES-like domain DS748_RS13100 PF00772 DnaB-like helicase N terminal domain DS748_RS13100 PF03796 DnaB-like helicase C terminal domain DS748_RS13105 PF00842 Alanine racemase, C-terminal domain DS748_RS13105 PF01168 Alanine racemase, N-terminal domain DS748_RS13110 PF00155 Aminotransferase class I and II DS748_RS13115 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DS748_RS13120 PF01894 Uncharacterised protein family UPF0047 DS748_RS13125 PF04237 YjbR DS748_RS13140 PF17760 UvrA interaction domain DS748_RS13140 PF17755 UvrA DNA-binding domain DS748_RS13140 PF00005 ABC transporter DS748_RS13150 PF00436 Single-strand binding protein family DS748_RS13190 PF00664 ABC transporter transmembrane region DS748_RS13190 PF00005 ABC transporter DS748_RS13195 PF15940 Family of unknown function DS748_RS13200 PF00563 EAL domain DS748_RS13200 PF12792 CSS motif domain associated with EAL DS748_RS13205 PF12833 Helix-turn-helix domain DS748_RS13210 PF09278 MerR, DNA binding DS748_RS13210 PF00376 MerR family regulatory protein DS748_RS13220 PF00860 Permease family DS748_RS13230 PF00999 Sodium/hydrogen exchanger family DS748_RS13235 PF03466 LysR substrate binding domain DS748_RS13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS13240 PF03788 LrgA family DS748_RS13245 PF04172 LrgB-like family DS748_RS13250 PF00474 Sodium:solute symporter family DS748_RS13255 PF04341 Protein of unknown function, DUF485 DS748_RS13260 PF16177 Acetyl-coenzyme A synthetase N-terminus DS748_RS13260 PF00501 AMP-binding enzyme DS748_RS13260 PF13193 AMP-binding enzyme C-terminal domain DS748_RS13265 PF02335 Cytochrome c552 DS748_RS13270 PF13435 Cytochrome c554 and c-prime DS748_RS13270 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) DS748_RS13275 PF00037 4Fe-4S binding domain DS748_RS13275 PF13247 4Fe-4S dicluster domain DS748_RS13280 PF03916 Polysulphide reductase, NrfD DS748_RS13285 PF01578 Cytochrome C assembly protein DS748_RS13285 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DS748_RS13290 PF03918 Cytochrome C biogenesis protein DS748_RS13300 PF00375 Sodium:dicarboxylate symporter family DS748_RS13305 PF08238 Sel1 repeat DS748_RS13325 PF00583 Acetyltransferase (GNAT) family DS748_RS13330 PF06983 3-demethylubiquinone-9 3-methyltransferase DS748_RS13335 PF08274 PhnA Zinc-Ribbon DS748_RS13335 PF03831 PhnA domain DS748_RS13340 PF00083 Sugar (and other) transporter DS748_RS13340 PF08946 Osmosensory transporter coiled coil DS748_RS13350 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS13350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS13355 PF00486 Transcriptional regulatory protein, C terminal DS748_RS13355 PF00072 Response regulator receiver domain DS748_RS13360 PF00884 Sulfatase DS748_RS13360 PF08019 Phosphoethanolamine transferase EptA/EptB DS748_RS13365 PF13520 Amino acid permease DS748_RS13370 PF12833 Helix-turn-helix domain DS748_RS13375 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DS748_RS13375 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DS748_RS13375 PF01276 Orn/Lys/Arg decarboxylase, major domain DS748_RS13380 PF12833 Helix-turn-helix domain DS748_RS13385 PF11975 Family 4 glycosyl hydrolase C-terminal domain DS748_RS13385 PF02056 Family 4 glycosyl hydrolase DS748_RS13395 PF05683 Fumarase C-terminus DS748_RS13395 PF05681 Fumarate hydratase (Fumerase) DS748_RS13400 PF03605 Anaerobic c4-dicarboxylate membrane transporter DS748_RS13410 PF00072 Response regulator receiver domain DS748_RS13415 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DS748_RS13415 PF00989 PAS fold DS748_RS13415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS13415 PF17203 Single cache domain 3 DS748_RS13425 PF13247 4Fe-4S dicluster domain DS748_RS13425 PF12800 4Fe-4S binding domain DS748_RS13430 PF04976 DMSO reductase anchor subunit (DmsC) DS748_RS13435 PF02613 Nitrate reductase delta subunit DS748_RS13445 PF06977 SdiA-regulated DS748_RS13460 PF00072 Response regulator receiver domain DS748_RS13460 PF00196 Bacterial regulatory proteins, luxR family DS748_RS13465 PF12833 Helix-turn-helix domain DS748_RS13490 PF01569 PAP2 superfamily DS748_RS13500 PF13614 AAA domain DS748_RS13505 PF03796 DnaB-like helicase C terminal domain DS748_RS13505 PF00772 DnaB-like helicase N terminal domain DS748_RS13515 PF01258 Prokaryotic dksA/traR C4-type zinc finger DS748_RS13550 PF01751 Toprim domain DS748_RS13550 PF01131 DNA topoisomerase DS748_RS13565 PF00436 Single-strand binding protein family DS748_RS13610 PF00437 Type II/IV secretion system protein DS748_RS13625 PF01464 Transglycosylase SLT domain DS748_RS13635 PF04917 Bacterial shufflon protein, N-terminal constant region DS748_RS13640 PF04917 Bacterial shufflon protein, N-terminal constant region DS748_RS13645 PF00589 Phage integrase family DS748_RS13790 PF01507 Phosphoadenosine phosphosulfate reductase family DS748_RS13790 PF11922 Domain of unknown function (DUF3440) DS748_RS13795 PF02195 ParB-like nuclease domain DS748_RS13870 PF00817 impB/mucB/samB family DS748_RS13870 PF13438 Domain of unknown function (DUF4113) DS748_RS13870 PF11799 impB/mucB/samB family C-terminal domain DS748_RS13875 PF00717 Peptidase S24-like DS748_RS13885 PF04606 Ogr/Delta-like zinc finger DS748_RS13925 PF00239 Resolvase, N terminal domain DS748_RS13925 PF02796 Helix-turn-helix domain of resolvase DS748_RS13930 PF05364 Salmonella type III secretion SopE effector N-terminus DS748_RS13930 PF07487 SopE GEF domain DS748_RS13935 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DS748_RS14050 PF06183 DinI-like family DS748_RS14060 PF05840 Bacteriophage replication gene A protein (GPA) DS748_RS14065 PF02086 D12 class N6 adenine-specific DNA methyltransferase DS748_RS14070 PF00929 Exonuclease DS748_RS14075 PF01258 Prokaryotic dksA/traR C4-type zinc finger DS748_RS14085 PF17282 Family of unknown function (DUF5347) DS748_RS14095 PF06892 Phage regulatory protein CII (CP76) DS748_RS14105 PF16452 Bacteriophage CI repressor C-terminal domain DS748_RS14105 PF07022 Bacteriophage CI repressor helix-turn-helix domain DS748_RS14110 PF02899 Phage integrase, N-terminal SAM-like domain DS748_RS14110 PF00589 Phage integrase family DS748_RS14115 PF00717 Peptidase S24-like DS748_RS14120 PF09857 Putative toxin of bacterial toxin-antitoxin pair DS748_RS14130 PF13847 Methyltransferase domain DS748_RS14150 PF01061 ABC-2 type transporter DS748_RS14155 PF02563 Polysaccharide biosynthesis/export protein DS748_RS14160 PF00534 Glycosyl transferases group 1 DS748_RS14170 PF01370 NAD dependent epimerase/dehydratase family DS748_RS14175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DS748_RS14175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DS748_RS14175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DS748_RS14200 PF02899 Phage integrase, N-terminal SAM-like domain DS748_RS14200 PF00589 Phage integrase family DS748_RS14240 PF13693 Winged helix-turn-helix DNA-binding DS748_RS14275 PF00589 Phage integrase family DS748_RS14275 PF13356 Arm DNA-binding domain DS748_RS14290 PF11412 Disulphide bond corrector protein DsbC DS748_RS14290 PF02683 Cytochrome C biogenesis protein transmembrane region DS748_RS14295 PF03091 CutA1 divalent ion tolerance protein DS748_RS14300 PF03605 Anaerobic c4-dicarboxylate membrane transporter DS748_RS14305 PF10415 Fumarase C C-terminus DS748_RS14305 PF00206 Lyase DS748_RS14310 PF04186 FxsA cytoplasmic membrane protein DS748_RS14315 PF13520 Amino acid permease DS748_RS14320 PF00166 Chaperonin 10 Kd subunit DS748_RS14325 PF00118 TCP-1/cpn60 chaperonin family DS748_RS14330 PF13698 Domain of unknown function (DUF4156) DS748_RS14335 PF15922 YjeJ-like DS748_RS14340 PF04055 Radical SAM superfamily DS748_RS14345 PF09285 Elongation factor P, C-terminal DS748_RS14345 PF01132 Elongation factor P (EF-P) OB domain DS748_RS14345 PF08207 Elongation factor P (EF-P) KOW-like domain DS748_RS14350 PF08085 Entericidin EcnA/B family DS748_RS14360 PF08085 Entericidin EcnA/B family DS748_RS14365 PF00196 Bacterial regulatory proteins, luxR family DS748_RS14370 PF00893 Small Multidrug Resistance protein DS748_RS14375 PF08212 Lipocalin-like domain DS748_RS14380 PF02313 Fumarate reductase subunit D DS748_RS14385 PF02300 Fumarate reductase subunit C DS748_RS14390 PF13085 2Fe-2S iron-sulfur cluster binding domain DS748_RS14390 PF13183 4Fe-4S dicluster domain DS748_RS14395 PF00890 FAD binding domain DS748_RS14395 PF02910 Fumarate reductase flavoprotein C-term DS748_RS14400 PF00152 tRNA synthetases class II (D, K and N) DS748_RS14405 PF13520 Amino acid permease DS748_RS14415 PF12795 Mechanosensitive ion channel porin domain DS748_RS14415 PF12794 Mechanosensitive ion channel inner membrane domain 1 DS748_RS14415 PF00924 Mechanosensitive ion channel DS748_RS14420 PF02666 Phosphatidylserine decarboxylase DS748_RS14425 PF03193 RsgA GTPase DS748_RS14430 PF00929 Exonuclease DS748_RS14435 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS748_RS14450 PF08331 Domain of unknown function (DUF1730) DS748_RS14455 PF01256 Carbohydrate kinase DS748_RS14455 PF03853 YjeF-related protein N-terminus DS748_RS14460 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DS748_RS14465 PF01520 N-acetylmuramoyl-L-alanine amidase DS748_RS14470 PF01119 DNA mismatch repair protein, C-terminal domain DS748_RS14470 PF08676 MutL C terminal dimerisation domain DS748_RS14480 PF17209 Hfq protein DS748_RS14485 PF16360 GTP-binding GTPase Middle Region DS748_RS14485 PF01926 50S ribosome-binding GTPase DS748_RS14485 PF13167 GTP-binding GTPase N-terminal DS748_RS14490 PF01145 SPFH domain / Band 7 family DS748_RS14490 PF12221 Bacterial membrane protein N terminal DS748_RS14495 PF01145 SPFH domain / Band 7 family DS748_RS14500 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) DS748_RS14505 PF00709 Adenylosuccinate synthetase DS748_RS14515 PF02082 Transcriptional regulator DS748_RS14520 PF08461 Ribonuclease R winged-helix domain DS748_RS14520 PF00575 S1 RNA binding domain DS748_RS14520 PF00773 RNB domain DS748_RS14520 PF08206 Ribonuclease B OB domain DS748_RS14520 PF17876 Cold shock domain DS748_RS14525 PF08032 RNA 2'-O ribose methyltransferase substrate binding DS748_RS14525 PF00588 SpoU rRNA Methylase family DS748_RS14530 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) DS748_RS14540 PF10679 Protein of unknown function (DUF2491) DS748_RS14545 PF03994 Domain of Unknown Function (DUF350) DS748_RS14550 PF06693 Protein of unknown function (DUF1190) DS748_RS14555 PF03738 Glutathionylspermidine synthase preATP-grasp DS748_RS14560 PF02770 Acyl-CoA dehydrogenase, middle domain DS748_RS14560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DS748_RS14560 PF18158 Adaptive response protein AidB N-terminal domain DS748_RS14565 PF07338 Protein of unknown function (DUF1471) DS748_RS14570 PF07338 Protein of unknown function (DUF1471) DS748_RS14575 PF00326 Prolyl oligopeptidase family DS748_RS14580 PF08220 DeoR-like helix-turn-helix domain DS748_RS14580 PF00455 DeoR C terminal sensor domain DS748_RS14590 PF03611 PTS system sugar-specific permease component DS748_RS14600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS748_RS14605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DS748_RS14610 PF01261 Xylose isomerase-like TIM barrel DS748_RS14615 PF00596 Class II Aldolase and Adducin N-terminal domain DS748_RS14620 PF07338 Protein of unknown function (DUF1471) DS748_RS14635 PF01250 Ribosomal protein S6 DS748_RS14640 PF00436 Single-strand binding protein family DS748_RS14645 PF01084 Ribosomal protein S18 DS748_RS14650 PF01281 Ribosomal protein L9, N-terminal domain DS748_RS14650 PF03948 Ribosomal protein L9, C-terminal domain DS748_RS14660 PF04225 Opacity-associated protein A LysM-like domain DS748_RS14660 PF08525 Opacity-associated protein A N-terminal motif DS748_RS14665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DS748_RS14665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS748_RS14670 PF00324 Amino acid permease DS748_RS14685 PF01814 Hemerythrin HHE cation binding domain DS748_RS14685 PF04405 Domain of Unknown function (DUF542) DS748_RS14690 PF00892 EamA-like transporter family DS748_RS14695 PF05368 NmrA-like family DS748_RS14700 PF01638 HxlR-like helix-turn-helix DS748_RS14705 PF02872 5'-nucleotidase, C-terminal domain DS748_RS14705 PF00149 Calcineurin-like phosphoesterase DS748_RS14715 PF00459 Inositol monophosphatase family DS748_RS14720 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) DS748_RS14730 PF06526 Protein of unknown function (DUF1107) DS748_RS14735 PF01797 Transposase IS200 like DS748_RS14745 PF01595 Cyclin M transmembrane N-terminal domain DS748_RS14745 PF00571 CBS domain DS748_RS14745 PF03471 Transporter associated domain DS748_RS14750 PF01625 Peptide methionine sulfoxide reductase DS748_RS14755 PF07244 Surface antigen variable number repeat DS748_RS14755 PF17243 POTRA domain TamA domain 1 DS748_RS14755 PF01103 Surface antigen DS748_RS14760 PF04357 TamB, inner membrane protein subunit of TAM complex DS748_RS14765 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DS748_RS14770 PF07690 Major Facilitator Superfamily DS748_RS14775 PF01979 Amidohydrolase family DS748_RS14780 PF00719 Inorganic pyrophosphatase DS748_RS14785 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DS748_RS14790 PF08245 Mur ligase middle domain DS748_RS14790 PF02875 Mur ligase family, glutamate ligase domain DS748_RS14790 PF01225 Mur ligase family, catalytic domain DS748_RS14795 PF04751 Protein of unknown function (DUF615) DS748_RS14800 PF01523 Putative modulator of DNA gyrase DS748_RS14805 PF07361 Cytochrome b562 DS748_RS14840 PF01979 Amidohydrolase family DS748_RS14845 PF03841 L-seryl-tRNA selenium transferase DS748_RS14850 PF07071 KDGP aldolase DS748_RS14855 PF05043 Mga helix-turn-helix domain DS748_RS14855 PF08279 HTH domain DS748_RS14855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS748_RS14855 PF00874 PRD domain DS748_RS14860 PF04221 RelB antitoxin DS748_RS14865 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DS748_RS14875 PF13597 Anaerobic ribonucleoside-triphosphate reductase DS748_RS14875 PF03477 ATP cone domain DS748_RS14880 PF11941 Domain of unknown function (DUF3459) DS748_RS14880 PF00128 Alpha amylase, catalytic domain DS748_RS14885 PF00367 phosphotransferase system, EIIB DS748_RS14885 PF02378 Phosphotransferase system, EIIC DS748_RS14890 PF00356 Bacterial regulatory proteins, lacI family DS748_RS14895 PF17059 MgtA leader peptide DS748_RS14900 PF00689 Cation transporting ATPase, C-terminus DS748_RS14900 PF00690 Cation transporter/ATPase, N-terminus DS748_RS14910 PF01042 Endoribonuclease L-PSP DS748_RS14915 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DS748_RS14915 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DS748_RS14920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DS748_RS14920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DS748_RS14925 PF08052 PyrBI operon leader peptide DS748_RS14935 PF02863 Arginine repressor, C-terminal domain DS748_RS14935 PF01316 Arginine repressor, DNA binding domain DS748_RS14940 PF03606 C4-dicarboxylate anaerobic carrier DS748_RS14945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DS748_RS14945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DS748_RS14950 PF00696 Amino acid kinase family DS748_RS14970 PF04074 YhcH/YjgK/YiaL DS748_RS14975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DS748_RS14975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DS748_RS14980 PF06877 Regulator of ribonuclease activity B DS748_RS14985 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DS748_RS14990 PF12276 Protein of unknown function (DUF3617) DS748_RS14995 PF00583 Acetyltransferase (GNAT) family DS748_RS15000 PF05987 Bacterial protein of unknown function (DUF898) DS748_RS15005 PF10458 Valyl tRNA synthetase tRNA binding arm DS748_RS15005 PF00133 tRNA synthetases class I (I, L, M and V) DS748_RS15005 PF08264 Anticodon-binding domain of tRNA DS748_RS15010 PF04364 DNA polymerase III chi subunit, HolC DS748_RS15015 PF02789 Cytosol aminopeptidase family, N-terminal domain DS748_RS15015 PF00883 Cytosol aminopeptidase family, catalytic domain DS748_RS15025 PF03739 Lipopolysaccharide export system permease LptF/LptG DS748_RS15030 PF03739 Lipopolysaccharide export system permease LptF/LptG DS748_RS15035 PF00356 Bacterial regulatory proteins, lacI family DS748_RS15040 PF02447 GntP family permease DS748_RS15050 PF00589 Phage integrase family DS748_RS15050 PF13356 Arm DNA-binding domain DS748_RS15055 PF03793 PASTA domain DS748_RS15055 PF00069 Protein kinase domain DS748_RS15060 PF03793 PASTA domain DS748_RS15060 PF00069 Protein kinase domain DS748_RS15080 PF04606 Ogr/Delta-like zinc finger DS748_RS15110 PF17345 Family of unknown function (DUF5375) DS748_RS15140 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS15140 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS15145 PF13953 PapC C-terminal domain DS748_RS15145 PF00577 Outer membrane usher protein DS748_RS15145 PF13954 PapC N-terminal domain DS748_RS15155 PF12833 Helix-turn-helix domain DS748_RS15175 PF01323 DSBA-like thioredoxin domain DS748_RS15180 PF06977 SdiA-regulated DS748_RS15215 PF01709 Transcriptional regulator DS748_RS15220 PF13847 Methyltransferase domain DS748_RS15225 PF09857 Putative toxin of bacterial toxin-antitoxin pair DS748_RS15245 PF03625 Domain of unknown function DUF302 DS748_RS15245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DS748_RS15250 PF01738 Dienelactone hydrolase family DS748_RS15260 PF07729 FCD domain DS748_RS15260 PF00392 Bacterial regulatory proteins, gntR family DS748_RS15265 PF00579 tRNA synthetases class I (W and Y) DS748_RS15280 PF01177 Asp/Glu/Hydantoin racemase DS748_RS15285 PF03466 LysR substrate binding domain DS748_RS15285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS15290 PF01979 Amidohydrolase family DS748_RS15295 PF07670 Nucleoside recognition DS748_RS15300 PF07670 Nucleoside recognition DS748_RS15310 PF06779 Uncharacterised MFS-type transporter YbfB DS748_RS15315 PF04286 Protein of unknown function (DUF445) DS748_RS15320 PF07690 Major Facilitator Superfamily DS748_RS15325 PF04754 Putative transposase, YhgA-like DS748_RS15350 PF08845 Toxin SymE, type I toxin-antitoxin system DS748_RS15355 PF01420 Type I restriction modification DNA specificity domain DS748_RS15360 PF02384 N-6 DNA Methylase DS748_RS15365 PF04851 Type III restriction enzyme, res subunit DS748_RS15365 PF08463 EcoEI R protein C-terminal DS748_RS15365 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DS748_RS15365 PF00271 Helicase conserved C-terminal domain DS748_RS15370 PF14338 Mrr N-terminal domain DS748_RS15370 PF04471 Restriction endonuclease DS748_RS15385 PF07683 Cobalamin synthesis protein cobW C-terminal domain DS748_RS15385 PF02492 CobW/HypB/UreG, nucleotide-binding domain DS748_RS15390 PF04328 Selenoprotein, putative DS748_RS15395 PF02554 Carbon starvation protein CstA DS748_RS15395 PF13722 5TM C-terminal transporter carbon starvation CstA DS748_RS15405 PF00884 Sulfatase DS748_RS15410 PF10696 Protein of unknown function (DUF2501) DS748_RS15415 PF01695 IstB-like ATP binding protein DS748_RS15420 PF17948 DnaT DNA-binding domain DS748_RS15425 PF12821 Threonine/Serine exporter, ThrE DS748_RS15430 PF06738 Putative threonine/serine exporter DS748_RS15435 PF00196 Bacterial regulatory proteins, luxR family DS748_RS15440 PF00196 Bacterial regulatory proteins, luxR family DS748_RS15445 PF04073 Aminoacyl-tRNA editing domain DS748_RS15450 PF06276 Ferric iron reductase FhuF-like transporter DS748_RS15450 PF11575 FhuF 2Fe-2S C-terminal domain DS748_RS15455 PF00990 Diguanylate cyclase, GGDEF domain DS748_RS15455 PF05230 MASE2 domain DS748_RS15460 PF07256 Protein of unknown function (DUF1435) DS748_RS15480 PF05175 Methyltransferase small domain DS748_RS15480 PF08468 Methyltransferase small domain N-terminal DS748_RS15485 PF03603 DNA polymerase III psi subunit DS748_RS15490 PF00583 Acetyltransferase (GNAT) family DS748_RS15495 PF13419 Haloacid dehalogenase-like hydrolase DS748_RS15500 PF00009 Elongation factor Tu GTP binding domain DS748_RS15500 PF03144 Elongation factor Tu domain 2 DS748_RS15500 PF16658 Class II release factor RF3, C-terminal domain DS748_RS15505 PF04972 BON domain DS748_RS15510 PF07043 Protein of unknown function (DUF1328) DS748_RS15515 PF01734 Patatin-like phospholipase DS748_RS15520 PF01026 TatD related DNase DS748_RS15525 PF04055 Radical SAM superfamily DS748_RS15530 PF11230 Protein of unknown function (DUF3029) DS748_RS15535 PF01791 DeoC/LacD family aldolase DS748_RS15540 PF00591 Glycosyl transferase family, a/b domain DS748_RS15540 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DS748_RS15540 PF02885 Glycosyl transferase family, helical bundle domain DS748_RS15545 PF01676 Metalloenzyme superfamily DS748_RS15550 PF01048 Phosphorylase superfamily DS748_RS15575 PF18429 Domain of unknown function (DUF5609) DS748_RS15580 PF18073 Rubredoxin metal binding domain DS748_RS15585 PF13521 AAA domain DS748_RS15585 PF01381 Helix-turn-helix DS748_RS15590 PF12848 ABC transporter DS748_RS15590 PF00005 ABC transporter DS748_RS15595 PF01464 Transglycosylase SLT domain DS748_RS15595 PF14718 Soluble lytic murein transglycosylase L domain DS748_RS15600 PF01371 Trp repressor protein DS748_RS15605 PF01931 Protein of unknown function DUF84 DS748_RS15610 PF00300 Histidine phosphatase superfamily (branch 1) DS748_RS15615 PF12833 Helix-turn-helix domain DS748_RS15615 PF06445 GyrI-like small molecule binding domain DS748_RS15620 PF05981 CreA protein DS748_RS15625 PF00486 Transcriptional regulatory protein, C terminal DS748_RS15625 PF00072 Response regulator receiver domain DS748_RS15630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS15630 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS15630 PF00672 HAMP domain DS748_RS15635 PF06123 Inner membrane protein CreD DS748_RS15655 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS15655 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS15675 PF00486 Transcriptional regulatory protein, C terminal DS748_RS15675 PF00072 Response regulator receiver domain DS748_RS15685 PF00588 SpoU rRNA Methylase family DS748_RS15690 PF08254 Threonine leader peptide DS748_RS15695 PF03447 Homoserine dehydrogenase, NAD binding domain DS748_RS15695 PF00742 Homoserine dehydrogenase DS748_RS15695 PF00696 Amino acid kinase family DS748_RS15695 PF01842 ACT domain DS748_RS15695 PF13840 ACT domain DS748_RS15700 PF00288 GHMP kinases N terminal domain DS748_RS15700 PF08544 GHMP kinases C terminal DS748_RS15705 PF14821 Threonine synthase N terminus DS748_RS15705 PF00291 Pyridoxal-phosphate dependent enzyme DS748_RS15710 PF03883 Peroxide stress protein YaaA DS748_RS15715 PF01235 Sodium:alanine symporter family DS748_RS15720 PF00923 Transaldolase/Fructose-6-phosphate aldolase DS748_RS15725 PF00994 Probable molybdopterin binding domain DS748_RS15730 PF01184 GPR1/FUN34/yaaH family DS748_RS15735 PF13099 Domain of unknown function (DUF3944) DS748_RS15735 PF03981 Ubiquinol-cytochrome C chaperone DS748_RS15740 PF10807 Protein of unknown function (DUF2541) DS748_RS15745 PF00012 Hsp70 protein DS748_RS15750 PF00684 DnaJ central domain DS748_RS15750 PF01556 DnaJ C terminal domain DS748_RS15750 PF00226 DnaJ domain DS748_RS15755 PF03466 LysR substrate binding domain DS748_RS15755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS15775 PF00704 Glycosyl hydrolases family 18 DS748_RS15790 PF00419 Fimbrial protein DS748_RS15795 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS15795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS15805 PF00419 Fimbrial protein DS748_RS15810 PF00419 Fimbrial protein DS748_RS15815 PF16970 Type-1 fimbrial protein, A DS748_RS15820 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS15820 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS15840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS15840 PF03466 LysR substrate binding domain DS748_RS15855 PF02872 5'-nucleotidase, C-terminal domain DS748_RS15855 PF00149 Calcineurin-like phosphoesterase DS748_RS15865 PF00884 Sulfatase DS748_RS15865 PF16385 Domain of unknown function DS748_RS15870 PF04055 Radical SAM superfamily DS748_RS15870 PF13186 Iron-sulfur cluster-binding domain DS748_RS15885 PF06965 Na+/H+ antiporter 1 DS748_RS15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS15890 PF03466 LysR substrate binding domain DS748_RS15895 PF01055 Glycosyl hydrolases family 31 DS748_RS15910 PF01649 Ribosomal protein S20 DS748_RS15915 PF10837 Protein of unknown function (DUF2575) DS748_RS15920 PF06574 FAD synthetase DS748_RS15920 PF01687 Riboflavin kinase DS748_RS15925 PF06827 Zinc finger found in FPG and IleRS DS748_RS15925 PF00133 tRNA synthetases class I (I, L, M and V) DS748_RS15925 PF08264 Anticodon-binding domain of tRNA DS748_RS15930 PF01252 Signal peptidase (SPase) II DS748_RS15935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS748_RS15940 PF02401 LytB protein DS748_RS15950 PF01156 Inosine-uridine preferring nucleoside hydrolase DS748_RS15955 PF00072 Response regulator receiver domain DS748_RS15955 PF12431 Transcriptional regulator DS748_RS15960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS15960 PF17203 Single cache domain 3 DS748_RS15965 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DS748_RS15970 PF00364 Biotin-requiring enzyme DS748_RS15970 PF00682 HMGL-like DS748_RS15970 PF02436 Conserved carboxylase domain DS748_RS15975 PF04277 Oxaloacetate decarboxylase, gamma chain DS748_RS15980 PF03390 2-hydroxycarboxylate transporter family DS748_RS15985 PF00583 Acetyltransferase (GNAT) family DS748_RS15985 PF08218 Citrate lyase ligase C-terminal domain DS748_RS15990 PF06857 Malonate decarboxylase delta subunit (MdcD) DS748_RS15995 PF03328 HpcH/HpaI aldolase/citrate lyase family DS748_RS16000 PF04223 Citrate lyase, alpha subunit (CitF) DS748_RS16005 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DS748_RS16010 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DS748_RS16015 PF05173 Dihydrodipicolinate reductase, C-terminus DS748_RS16015 PF01113 Dihydrodipicolinate reductase, N-terminus DS748_RS16025 PF00117 Glutamine amidotransferase class-I DS748_RS16025 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DS748_RS16030 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DS748_RS16030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DS748_RS16030 PF02142 MGS-like domain DS748_RS16035 PF07180 CaiF/GrlA transcriptional regulator DS748_RS16040 PF00132 Bacterial transferase hexapeptide (six repeats) DS748_RS16045 PF00378 Enoyl-CoA hydratase/isomerase DS748_RS16050 PF13193 AMP-binding enzyme C-terminal domain DS748_RS16050 PF00501 AMP-binding enzyme DS748_RS16055 PF02515 CoA-transferase family III DS748_RS16060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DS748_RS16060 PF02770 Acyl-CoA dehydrogenase, middle domain DS748_RS16060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DS748_RS16065 PF02028 BCCT, betaine/carnitine/choline family transporter DS748_RS16075 PF01012 Electron transfer flavoprotein domain DS748_RS16080 PF01012 Electron transfer flavoprotein domain DS748_RS16080 PF00766 Electron transfer flavoprotein FAD-binding domain DS748_RS16085 PF01494 FAD binding domain DS748_RS16095 PF00083 Sugar (and other) transporter DS748_RS16100 PF06004 Bacterial protein of unknown function (DUF903) DS748_RS16120 PF02525 Flavodoxin-like fold DS748_RS16125 PF00999 Sodium/hydrogen exchanger family DS748_RS16125 PF02254 TrkA-N domain DS748_RS16130 PF00186 Dihydrofolate reductase DS748_RS16135 PF00149 Calcineurin-like phosphoesterase DS748_RS16140 PF04379 ApaG domain DS748_RS16145 PF00398 Ribosomal RNA adenine dimethylase DS748_RS16150 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DS748_RS16155 PF09312 SurA N-terminal domain DS748_RS16155 PF00639 PPIC-type PPIASE domain DS748_RS16160 PF04453 LPS transport system D DS748_RS16160 PF03968 OstA-like protein DS748_RS16165 PF05099 Tellurite resistance protein TerB DS748_RS16165 PF00226 DnaJ domain DS748_RS16170 PF00849 RNA pseudouridylate synthase DS748_RS16175 PF12137 RNA polymerase recycling family C-terminal DS748_RS16175 PF00271 Helicase conserved C-terminal domain DS748_RS16175 PF18337 RapA N-terminal Tudor like domain DS748_RS16175 PF00176 SNF2 family N-terminal domain DS748_RS16175 PF18339 RapA N-terminal Tudor like domain 1 DS748_RS16180 PF03104 DNA polymerase family B, exonuclease domain DS748_RS16180 PF00136 DNA polymerase family B DS748_RS16195 PF01385 Probable transposase DS748_RS16195 PF12323 Helix-turn-helix domain DS748_RS16195 PF07282 Putative transposase DNA-binding domain DS748_RS16215 PF00596 Class II Aldolase and Adducin N-terminal domain DS748_RS16220 PF11762 L-arabinose isomerase C-terminal domain DS748_RS16220 PF02610 L-arabinose isomerase DS748_RS16225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DS748_RS16230 PF12833 Helix-turn-helix domain DS748_RS16230 PF02311 AraC-like ligand binding domain DS748_RS16235 PF09335 SNARE associated Golgi protein DS748_RS16240 PF00005 ABC transporter DS748_RS16245 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS16255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS748_RS16255 PF12793 Sugar transport-related sRNA regulator N-term DS748_RS16265 PF00694 Aconitase C-terminal domain DS748_RS16270 PF00330 Aconitase family (aconitate hydratase) DS748_RS16275 PF00180 Isocitrate/isopropylmalate dehydrogenase DS748_RS16280 PF08502 LeuA allosteric (dimerisation) domain DS748_RS16280 PF00682 HMGL-like DS748_RS16285 PF08054 Leucine operon leader peptide DS748_RS16290 PF03466 LysR substrate binding domain DS748_RS16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS16295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DS748_RS16295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS748_RS16295 PF00205 Thiamine pyrophosphate enzyme, central domain DS748_RS16300 PF10369 Small subunit of acetolactate synthase DS748_RS16305 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DS748_RS16305 PF00356 Bacterial regulatory proteins, lacI family DS748_RS16310 PF02381 MraZ protein, putative antitoxin-like DS748_RS16315 PF01795 MraW methylase family DS748_RS16320 PF04999 Cell division protein FtsL DS748_RS16325 PF00905 Penicillin binding protein transpeptidase domain DS748_RS16325 PF03717 Penicillin-binding Protein dimerisation domain DS748_RS16330 PF01225 Mur ligase family, catalytic domain DS748_RS16330 PF02875 Mur ligase family, glutamate ligase domain DS748_RS16330 PF08245 Mur ligase middle domain DS748_RS16335 PF01225 Mur ligase family, catalytic domain DS748_RS16335 PF08245 Mur ligase middle domain DS748_RS16335 PF02875 Mur ligase family, glutamate ligase domain DS748_RS16340 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DS748_RS16340 PF00953 Glycosyl transferase family 4 DS748_RS16345 PF02875 Mur ligase family, glutamate ligase domain DS748_RS16345 PF08245 Mur ligase middle domain DS748_RS16350 PF01098 Cell cycle protein DS748_RS16355 PF04101 Glycosyltransferase family 28 C-terminal domain DS748_RS16355 PF03033 Glycosyltransferase family 28 N-terminal domain DS748_RS16360 PF02875 Mur ligase family, glutamate ligase domain DS748_RS16360 PF08245 Mur ligase middle domain DS748_RS16360 PF01225 Mur ligase family, catalytic domain DS748_RS16365 PF07478 D-ala D-ala ligase C-terminus DS748_RS16365 PF01820 D-ala D-ala ligase N-terminus DS748_RS16370 PF08478 POTRA domain, FtsQ-type DS748_RS16370 PF03799 Cell division protein FtsQ DS748_RS16375 PF02491 SHS2 domain inserted in FTSA DS748_RS16380 PF00091 Tubulin/FtsZ family, GTPase domain DS748_RS16380 PF12327 FtsZ family, C-terminal domain DS748_RS16385 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DS748_RS16390 PF06558 Secretion monitor precursor protein (SecM) DS748_RS16395 PF07516 SecA Wing and Scaffold domain DS748_RS16395 PF01043 SecA preprotein cross-linking domain DS748_RS16395 PF07517 SecA DEAD-like domain DS748_RS16395 PF02810 SEC-C motif DS748_RS16400 PF00293 NUDIX domain DS748_RS16405 PF00248 Aldo/keto reductase family DS748_RS16410 PF03466 LysR substrate binding domain DS748_RS16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS16415 PF03884 DNA gyrase inhibitor YacG DS748_RS16420 PF07072 Cell division protein DS748_RS16425 PF01121 Dephospho-CoA kinase DS748_RS16430 PF00478 IMP dehydrogenase / GMP reductase domain DS748_RS16435 PF00482 Type II secretion system (T2SS), protein F DS748_RS16440 PF00437 Type II/IV secretion system protein DS748_RS16440 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DS748_RS16445 PF07963 Prokaryotic N-terminal methylation motif DS748_RS16455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DS748_RS16455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DS748_RS16460 PF01510 N-acetylmuramoyl-L-alanine amidase DS748_RS16465 PF17113 Regulatory signalling modulator protein AmpE DS748_RS16470 PF04616 Glycosyl hydrolases family 43 DS748_RS16470 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain DS748_RS16480 PF00324 Amino acid permease DS748_RS16485 PF00392 Bacterial regulatory proteins, gntR family DS748_RS16485 PF07729 FCD domain DS748_RS16490 PF00456 Transketolase, thiamine diphosphate binding domain DS748_RS16490 PF17831 Pyruvate dehydrogenase E1 component middle domain DS748_RS16495 PF00364 Biotin-requiring enzyme DS748_RS16495 PF02817 e3 binding domain DS748_RS16495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DS748_RS16500 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS16500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DS748_RS16515 PF11737 Protein of unknown function (DUF3300) DS748_RS16520 PF11791 Aconitate B N-terminal domain DS748_RS16520 PF06434 Aconitate hydratase 2 N-terminus DS748_RS16520 PF00330 Aconitase family (aconitate hydratase) DS748_RS16525 PF06062 Uncharacterised protein family (UPF0231) DS748_RS16530 PF03812 2-keto-3-deoxygluconate permease DS748_RS16535 PF07005 Sugar-binding N-terminal domain DS748_RS16535 PF17042 Nucleotide-binding C-terminal domain DS748_RS16540 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DS748_RS16545 PF00455 DeoR C terminal sensor domain DS748_RS16545 PF08220 DeoR-like helix-turn-helix domain DS748_RS16550 PF02675 S-adenosylmethionine decarboxylase DS748_RS16555 PF17284 Spermidine synthase tetramerisation domain DS748_RS16560 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) DS748_RS16565 PF07732 Multicopper oxidase DS748_RS16565 PF00394 Multicopper oxidase DS748_RS16565 PF07731 Multicopper oxidase DS748_RS16570 PF01011 PQQ enzyme repeat DS748_RS16575 PF00156 Phosphoribosyl transferase domain DS748_RS16580 PF00484 Carbonic anhydrase DS748_RS16585 PF00005 ABC transporter DS748_RS16590 PF01061 ABC-2 type transporter DS748_RS16595 PF03610 PTS system fructose IIA component DS748_RS16600 PF01522 Polysaccharide deacetylase DS748_RS16605 PF02261 Aspartate decarboxylase DS748_RS16610 PF02569 Pantoate-beta-alanine ligase DS748_RS16615 PF02548 Ketopantoate hydroxymethyltransferase DS748_RS16620 PF00419 Fimbrial protein DS748_RS16630 PF00419 Fimbrial protein DS748_RS16635 PF00419 Fimbrial protein DS748_RS16640 PF13953 PapC C-terminal domain DS748_RS16640 PF13954 PapC N-terminal domain DS748_RS16640 PF00577 Outer membrane usher protein DS748_RS16645 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS16645 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS16655 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DS748_RS16660 PF12627 Probable RNA and SrmB- binding site of polymerase A DS748_RS16660 PF01743 Poly A polymerase head domain DS748_RS16660 PF12626 Polymerase A arginine-rich C-terminus DS748_RS16665 PF00749 tRNA synthetases class I (E and Q), catalytic domain DS748_RS16670 PF01258 Prokaryotic dksA/traR C4-type zinc finger DS748_RS16675 PF03749 Sugar fermentation stimulation protein RE domain DS748_RS16675 PF17746 SfsA N-terminal OB domain DS748_RS16680 PF02834 LigT like Phosphoesterase DS748_RS16685 PF00271 Helicase conserved C-terminal domain DS748_RS16685 PF08482 ATP-dependent helicase C-terminal DS748_RS16685 PF04408 Helicase associated domain (HA2) DS748_RS16685 PF00270 DEAD/DEAH box helicase DS748_RS16690 PF00905 Penicillin binding protein transpeptidase domain DS748_RS16690 PF00912 Transglycosylase DS748_RS16690 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal DS748_RS16690 PF14814 Bifunctional transglycosylase second domain DS748_RS16700 PF00005 ABC transporter DS748_RS16705 PF01497 Periplasmic binding protein DS748_RS16710 PF01032 FecCD transport family DS748_RS16715 PF00202 Aminotransferase class-III DS748_RS16720 PF00654 Voltage gated chloride channel DS748_RS16725 PF01521 Iron-sulphur cluster biosynthesis DS748_RS16730 PF03458 UPF0126 domain DS748_RS16735 PF01497 Periplasmic binding protein DS748_RS16740 PF01048 Phosphorylase superfamily DS748_RS16745 PF01966 HD domain DS748_RS16745 PF13286 Phosphohydrolase-associated domain DS748_RS16750 PF00595 PDZ domain DS748_RS16755 PF05651 Putative sugar diacid recognition DS748_RS16755 PF13556 PucR C-terminal helix-turn-helix domain DS748_RS16755 PF17853 GGDEF-like domain DS748_RS16760 PF11944 Protein of unknown function (DUF3461) DS748_RS16765 PF00083 Sugar (and other) transporter DS748_RS16765 PF07690 Major Facilitator Superfamily DS748_RS16770 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DS748_RS16770 PF14602 Hexapeptide repeat of succinyl-transferase DS748_RS16770 PF00132 Bacterial transferase hexapeptide (six repeats) DS748_RS16775 PF01909 Nucleotidyltransferase domain DS748_RS16775 PF01966 HD domain DS748_RS16775 PF08335 GlnD PII-uridylyltransferase DS748_RS16775 PF01842 ACT domain DS748_RS16780 PF00557 Metallopeptidase family M24 DS748_RS16785 PF00318 Ribosomal protein S2 DS748_RS16790 PF00889 Elongation factor TS DS748_RS16795 PF00696 Amino acid kinase family DS748_RS16800 PF01765 Ribosome recycling factor DS748_RS16805 PF13288 DXP reductoisomerase C-terminal domain DS748_RS16805 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DS748_RS16805 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DS748_RS16810 PF01255 Putative undecaprenyl diphosphate synthase DS748_RS16820 PF02163 Peptidase family M50 DS748_RS16820 PF17820 PDZ domain DS748_RS16825 PF01103 Surface antigen DS748_RS16825 PF07244 Surface antigen variable number repeat DS748_RS16830 PF03938 Outer membrane protein (OmpH-like) DS748_RS16835 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DS748_RS16835 PF00132 Bacterial transferase hexapeptide (six repeats) DS748_RS16840 PF07977 FabA-like domain DS748_RS16845 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DS748_RS16845 PF00132 Bacterial transferase hexapeptide (six repeats) DS748_RS16850 PF02684 Lipid-A-disaccharide synthetase DS748_RS16855 PF01351 Ribonuclease HII DS748_RS16860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DS748_RS16860 PF02811 PHP domain DS748_RS16860 PF01336 OB-fold nucleic acid binding domain DS748_RS16860 PF07733 Bacterial DNA polymerase III alpha NTPase domain DS748_RS16860 PF14579 Helix-hairpin-helix motif DS748_RS16865 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DS748_RS16880 PF01276 Orn/Lys/Arg decarboxylase, major domain DS748_RS16880 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DS748_RS16880 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DS748_RS16885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DS748_RS16890 PF11734 TilS substrate C-terminal domain DS748_RS16890 PF01171 PP-loop family DS748_RS16890 PF09179 TilS substrate binding domain DS748_RS16895 PF07073 Modulator of Rho-dependent transcription termination (ROF) DS748_RS16900 PF06786 Uncharacterised protein family (UPF0253) DS748_RS16905 PF07152 YaeQ protein DS748_RS16910 PF00472 RF-1 domain DS748_RS16915 PF17185 NlpE C-terminal OB domain DS748_RS16915 PF04170 NlpE N-terminal domain DS748_RS16930 PF04073 Aminoacyl-tRNA editing domain DS748_RS16930 PF03129 Anticodon binding domain DS748_RS16930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DS748_RS16935 PF01980 tRNA-methyltransferase O DS748_RS16935 PF18389 TrmO C-terminal domain DS748_RS16940 PF16358 RcsF lipoprotein DS748_RS16945 PF03180 NLPA lipoprotein DS748_RS16950 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS16955 PF09383 NIL domain DS748_RS16955 PF00005 ABC transporter DS748_RS16995 PF00083 Sugar (and other) transporter DS748_RS17000 PF10043 Predicted periplasmic lipoprotein (DUF2279) DS748_RS17005 PF13091 PLD-like domain DS748_RS17010 PF13607 Succinyl-CoA ligase like flavodoxin domain DS748_RS17010 PF00583 Acetyltransferase (GNAT) family DS748_RS17010 PF13380 CoA binding domain DS748_RS17015 PF03942 DTW domain DS748_RS17020 PF00085 Thioredoxin DS748_RS17025 PF00588 SpoU rRNA Methylase family DS748_RS17025 PF08032 RNA 2'-O ribose methyltransferase substrate binding DS748_RS17030 PF03167 Uracil DNA glycosylase superfamily DS748_RS17035 PF01228 Glycine radical DS748_RS17040 PF01810 LysE type translocator DS748_RS17050 PF00270 DEAD/DEAH box helicase DS748_RS17050 PF00271 Helicase conserved C-terminal domain DS748_RS17055 PF05175 Methyltransferase small domain DS748_RS17060 PF00890 FAD binding domain DS748_RS17060 PF02910 Fumarate reductase flavoprotein C-term DS748_RS17075 PF04542 Sigma-70 region 2 DS748_RS17075 PF08281 Sigma-70, region 4 DS748_RS17080 PF03872 Anti sigma-E protein RseA, N-terminal domain DS748_RS17080 PF03873 Anti sigma-E protein RseA, C-terminal domain DS748_RS17085 PF17188 MucB/RseB C-terminal domain DS748_RS17085 PF03888 MucB/RseB N-terminal domain DS748_RS17100 PF00009 Elongation factor Tu GTP binding domain DS748_RS17100 PF06421 GTP-binding protein LepA C-terminus DS748_RS17100 PF00679 Elongation factor G C-terminus DS748_RS17100 PF03144 Elongation factor Tu domain 2 DS748_RS17105 PF10502 Signal peptidase, peptidase S26 DS748_RS17110 PF00035 Double-stranded RNA binding motif DS748_RS17110 PF14622 Ribonuclease-III-like DS748_RS17115 PF07650 KH domain DS748_RS17115 PF01926 50S ribosome-binding GTPase DS748_RS17120 PF02565 Recombination protein O C terminal DS748_RS17120 PF11967 Recombination protein O N terminal DS748_RS17125 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DS748_RS17130 PF01648 4'-phosphopantetheinyl transferase superfamily DS748_RS17135 PF12838 4Fe-4S dicluster domain DS748_RS17140 PF03466 LysR substrate binding domain DS748_RS17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS17145 PF07690 Major Facilitator Superfamily DS748_RS17150 PF02558 Ketopantoate reductase PanE/ApbA DS748_RS17150 PF08546 Ketopantoate reductase PanE/ApbA C terminal DS748_RS17155 PF01418 Helix-turn-helix domain, rpiR family DS748_RS17155 PF01380 SIS domain DS748_RS17160 PF01380 SIS domain DS748_RS17165 PF00367 phosphotransferase system, EIIB DS748_RS17165 PF02378 Phosphotransferase system, EIIC DS748_RS17175 PF14437 MafB19-like deaminase DS748_RS17180 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS748_RS17180 PF01464 Transglycosylase SLT domain DS748_RS17190 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DS748_RS17190 PF02769 AIR synthase related protein, C-terminal domain DS748_RS17190 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DS748_RS17195 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS17195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS17200 PF13942 YfhG lipoprotein DS748_RS17205 PF00158 Sigma-54 interaction domain DS748_RS17205 PF00072 Response regulator receiver domain DS748_RS17210 PF00543 Nitrogen regulatory protein P-II DS748_RS17215 PF00854 POT family DS748_RS17220 PF01276 Orn/Lys/Arg decarboxylase, major domain DS748_RS17220 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DS748_RS17220 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DS748_RS17225 PF13520 Amino acid permease DS748_RS17230 PF18500 CadC C-terminal domain 1 DS748_RS17230 PF00486 Transcriptional regulatory protein, C terminal DS748_RS17235 PF00175 Oxidoreductase NAD-binding domain DS748_RS17235 PF00042 Globin DS748_RS17235 PF00970 Oxidoreductase FAD-binding domain DS748_RS17240 PF00464 Serine hydroxymethyltransferase DS748_RS17245 PF12832 MFS_1 like family DS748_RS17250 PF00874 PRD domain DS748_RS17265 PF13187 4Fe-4S dicluster domain DS748_RS17265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DS748_RS17265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DS748_RS17270 PF00175 Oxidoreductase NAD-binding domain DS748_RS17270 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DS748_RS17275 PF17179 4Fe-4S dicluster domain DS748_RS17280 PF12146 Serine aminopeptidase, S33 DS748_RS17285 PF00459 Inositol monophosphatase family DS748_RS17290 PF00588 SpoU rRNA Methylase family DS748_RS17295 PF02082 Transcriptional regulator DS748_RS17300 PF00266 Aminotransferase class-V DS748_RS17305 PF01592 NifU-like N terminal domain DS748_RS17310 PF01521 Iron-sulphur cluster biosynthesis DS748_RS17315 PF07743 HSCB C-terminal oligomerisation domain DS748_RS17320 PF00012 Hsp70 protein DS748_RS17325 PF00111 2Fe-2S iron-sulfur cluster binding domain DS748_RS17330 PF04384 Iron-sulphur cluster assembly DS748_RS17335 PF12404 Peptidase DS748_RS17335 PF00883 Cytosol aminopeptidase family, catalytic domain DS748_RS17340 PF14581 SseB protein C-terminal domain DS748_RS17340 PF07179 SseB protein N-terminal domain DS748_RS17355 PF00581 Rhodanese-like domain DS748_RS17360 PF07678 A-macroglobulin TED domain DS748_RS17360 PF01835 MG2 domain DS748_RS17360 PF17962 Bacterial macroglobulin domain 6 DS748_RS17360 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DS748_RS17360 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DS748_RS17360 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DS748_RS17360 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DS748_RS17360 PF07703 Alpha-2-macroglobulin bait region domain DS748_RS17360 PF00207 Alpha-2-macroglobulin family DS748_RS17365 PF06832 Penicillin-Binding Protein C-terminus Family DS748_RS17365 PF00905 Penicillin binding protein transpeptidase domain DS748_RS17365 PF00912 Transglycosylase DS748_RS17375 PF13247 4Fe-4S dicluster domain DS748_RS17375 PF12800 4Fe-4S binding domain DS748_RS17390 PF00334 Nucleoside diphosphate kinase DS748_RS17395 PF04055 Radical SAM superfamily DS748_RS17400 PF13464 Domain of unknown function (DUF4115) DS748_RS17405 PF04551 GcpE protein DS748_RS17410 PF03129 Anticodon binding domain DS748_RS17410 PF13393 Histidyl-tRNA synthetase DS748_RS17415 PF09976 Tetratricopeptide repeat-like domain DS748_RS17420 PF13360 PQQ-like domain DS748_RS17425 PF01926 50S ribosome-binding GTPase DS748_RS17425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DS748_RS17430 PF07191 zinc-ribbons DS748_RS17465 PF02601 Exonuclease VII, large subunit DS748_RS17465 PF13742 OB-fold nucleic acid binding domain DS748_RS17470 PF00478 IMP dehydrogenase / GMP reductase domain DS748_RS17470 PF00571 CBS domain DS748_RS17475 PF00958 GMP synthase C terminal domain DS748_RS17475 PF02540 NAD synthase DS748_RS17475 PF00117 Glutamine amidotransferase class-I DS748_RS17485 PF17358 Family of unknown function (DUF5384) DS748_RS17490 PF05433 Glycine zipper 2TM domain DS748_RS17495 PF11119 Protein of unknown function (DUF2633) DS748_RS17505 PF05231 MASE1 DS748_RS17505 PF00563 EAL domain DS748_RS17510 PF02541 Ppx/GppA phosphatase family DS748_RS17515 PF17941 Polyphosphate kinase C-terminal domain 1 DS748_RS17515 PF13090 Polyphosphate kinase C-terminal domain 2 DS748_RS17515 PF02503 Polyphosphate kinase middle domain DS748_RS17515 PF13089 Polyphosphate kinase N-terminal domain DS748_RS17520 PF00551 Formyl transferase DS748_RS17525 PF02769 AIR synthase related protein, C-terminal domain DS748_RS17525 PF00586 AIR synthase related protein, N-terminal domain DS748_RS17535 PF00860 Permease family DS748_RS17540 PF00308 Bacterial dnaA protein DS748_RS17545 PF03960 ArsC family DS748_RS17550 PF01435 Peptidase family M48 DS748_RS17555 PF01594 AI-2E family transporter DS748_RS17565 PF02447 GntP family permease DS748_RS17570 PF02595 Glycerate kinase family DS748_RS17575 PF00578 AhpC/TSA family DS748_RS17580 PF01842 ACT domain DS748_RS17585 PF00701 Dihydrodipicolinate synthetase family DS748_RS17590 PF06804 NlpB/DapX lipoprotein DS748_RS17595 PF01259 SAICAR synthetase DS748_RS17600 PF04228 Putative neutral zinc metallopeptidase DS748_RS17605 PF05127 Helicase DS748_RS17605 PF17176 tRNA-binding domain DS748_RS17605 PF08351 Domain of unknown function (DUF1726) DS748_RS17605 PF13718 GNAT acetyltransferase 2 DS748_RS17610 PF13980 Uncharacterised protein family (UPF0370) DS748_RS17615 PF07687 Peptidase dimerisation domain DS748_RS17615 PF01546 Peptidase family M20/M25/M40 DS748_RS17620 PF03960 ArsC family DS748_RS17630 PF00873 AcrB/AcrD/AcrF family DS748_RS17635 PF07730 Histidine kinase DS748_RS17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS17635 PF00672 HAMP domain DS748_RS17635 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DS748_RS17640 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS17640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DS748_RS17640 PF13247 4Fe-4S dicluster domain DS748_RS17645 PF00144 Beta-lactamase DS748_RS17650 PF00293 NUDIX domain DS748_RS17655 PF06674 Protein of unknown function (DUF1176) DS748_RS17665 PF02780 Transketolase, C-terminal domain DS748_RS17665 PF02779 Transketolase, pyrimidine binding domain DS748_RS17665 PF00456 Transketolase, thiamine diphosphate binding domain DS748_RS17670 PF00923 Transaldolase/Fructose-6-phosphate aldolase DS748_RS17675 PF01515 Phosphate acetyl/butaryl transferase DS748_RS17675 PF03949 Malic enzyme, NAD binding domain DS748_RS17675 PF00390 Malic enzyme, N-terminal domain DS748_RS17685 PF01797 Transposase IS200 like DS748_RS17690 PF00936 BMC domain DS748_RS17695 PF10662 Ethanolamine utilisation - propanediol utilisation DS748_RS17700 PF06249 Ethanolamine utilisation protein EutQ DS748_RS17705 PF01923 Cobalamin adenosyltransferase DS748_RS17710 PF01515 Phosphate acetyl/butaryl transferase DS748_RS17720 PF03319 Ethanolamine utilisation protein EutN/carboxysome DS748_RS17725 PF00171 Aldehyde dehydrogenase family DS748_RS17735 PF00465 Iron-containing alcohol dehydrogenase DS748_RS17740 PF04346 Ethanolamine utilisation protein, EutH DS748_RS17745 PF06277 Ethanolamine utilisation protein EutA DS748_RS17750 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DS748_RS17755 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DS748_RS17760 PF00936 BMC domain DS748_RS17765 PF00936 BMC domain DS748_RS17765 PF16365 Ethanolamine utilization protein EutK C-terminus DS748_RS17770 PF12833 Helix-turn-helix domain DS748_RS17775 PF09234 Domain of unknown function (DUF1963) DS748_RS17785 PF01218 Coproporphyrinogen III oxidase DS748_RS17790 PF01520 N-acetylmuramoyl-L-alanine amidase DS748_RS17795 PF00583 Acetyltransferase (GNAT) family DS748_RS17800 PF11143 Protein of unknown function (DUF2919) DS748_RS17805 PF06572 Protein of unknown function (DUF1131) DS748_RS17810 PF04261 Dyp-type peroxidase family DS748_RS17825 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS17830 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS17835 PF00005 ABC transporter DS748_RS17840 PF00291 Pyridoxal-phosphate dependent enzyme DS748_RS17845 PF17263 Family of unknown function (DUF5329) DS748_RS17850 PF00117 Glutamine amidotransferase class-I DS748_RS17855 PF00392 Bacterial regulatory proteins, gntR family DS748_RS17855 PF00155 Aminotransferase class I and II DS748_RS17860 PF08543 Phosphomethylpyrimidine kinase DS748_RS17870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DS748_RS17875 PF05524 PEP-utilising enzyme, N-terminal DS748_RS17875 PF02896 PEP-utilising enzyme, TIM barrel domain DS748_RS17875 PF00391 PEP-utilising enzyme, mobile domain DS748_RS17880 PF00381 PTS HPr component phosphorylation site DS748_RS17885 PF00291 Pyridoxal-phosphate dependent enzyme DS748_RS17895 PF04354 ZipA, C-terminal FtsZ-binding domain DS748_RS17900 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DS748_RS17900 PF12826 Helix-hairpin-helix motif DS748_RS17900 PF00533 BRCA1 C Terminus (BRCT) domain DS748_RS17900 PF01653 NAD-dependent DNA ligase adenylation domain DS748_RS17900 PF03120 NAD-dependent DNA ligase OB-fold domain DS748_RS17905 PF12843 Putative quorum-sensing-regulated virulence factor DS748_RS17910 PF13593 SBF-like CPA transporter family (DUF4137) DS748_RS17915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS17915 PF03466 LysR substrate binding domain DS748_RS17920 PF03502 Nucleoside-specific channel-forming protein, Tsx DS748_RS17925 PF01048 Phosphorylase superfamily DS748_RS17930 PF03825 Nucleoside H+ symporter DS748_RS17940 PF03466 LysR substrate binding domain DS748_RS17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS17965 PF00749 tRNA synthetases class I (E and Q), catalytic domain DS748_RS17970 PF07037 Putative transcription regulator (DUF1323) DS748_RS17975 PF07037 Putative transcription regulator (DUF1323) DS748_RS17990 PF05231 MASE1 DS748_RS17990 PF00563 EAL domain DS748_RS17995 PF01773 Na+ dependent nucleoside transporter N-terminus DS748_RS17995 PF07662 Na+ dependent nucleoside transporter C-terminus DS748_RS17995 PF07670 Nucleoside recognition DS748_RS18000 PF01566 Natural resistance-associated macrophage protein DS748_RS18005 PF10697 Protein of unknown function (DUF2502) DS748_RS18010 PF00248 Aldo/keto reductase family DS748_RS18020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS748_RS18020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DS748_RS18020 PF00205 Thiamine pyrophosphate enzyme, central domain DS748_RS18025 PF00654 Voltage gated chloride channel DS748_RS18030 PF02685 Glucokinase DS748_RS18035 PF00155 Aminotransferase class I and II DS748_RS18045 PF01797 Transposase IS200 like DS748_RS18055 PF03279 Bacterial lipid A biosynthesis acyltransferase DS748_RS18060 PF10810 Protein of unknown function (DUF2545) DS748_RS18065 PF07690 Major Facilitator Superfamily DS748_RS18080 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS18080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS18080 PF00672 HAMP domain DS748_RS18085 PF14532 Sigma-54 interaction domain DS748_RS18085 PF00072 Response regulator receiver domain DS748_RS18085 PF02954 Bacterial regulatory protein, Fis family DS748_RS18090 PF01278 Omptin family DS748_RS18110 PF01757 Acyltransferase family DS748_RS18115 PF00535 Glycosyl transferase family 2 DS748_RS18120 PF04138 GtrA-like protein DS748_RS18140 PF01226 Formate/nitrite transporter DS748_RS18145 PF04333 MlaA lipoprotein DS748_RS18150 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DS748_RS18155 PF04175 Protein of unknown function (DUF406) DS748_RS18160 PF02803 Thiolase, C-terminal domain DS748_RS18160 PF00108 Thiolase, N-terminal domain DS748_RS18165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DS748_RS18165 PF00378 Enoyl-CoA hydratase/isomerase DS748_RS18165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DS748_RS18170 PF00300 Histidine phosphatase superfamily (branch 1) DS748_RS18175 PF01713 Smr domain DS748_RS18180 PF05175 Methyltransferase small domain DS748_RS18185 PF01264 Chorismate synthase DS748_RS18190 PF03411 Penicillin-insensitive murein endopeptidase DS748_RS18195 PF01925 Sulfite exporter TauE/SafE DS748_RS18205 PF08891 YfcL protein DS748_RS18210 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DS748_RS18210 PF01266 FAD dependent oxidoreductase DS748_RS18215 PF02801 Beta-ketoacyl synthase, C-terminal domain DS748_RS18215 PF00109 Beta-ketoacyl synthase, N-terminal domain DS748_RS18220 PF02517 CPBP intramembrane metalloprotease DS748_RS18235 PF13693 Winged helix-turn-helix DNA-binding DS748_RS18245 PF07690 Major Facilitator Superfamily DS748_RS18255 PF11890 Domain of unknown function (DUF3410) DS748_RS18255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS748_RS18255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DS748_RS18260 PF01118 Semialdehyde dehydrogenase, NAD binding domain DS748_RS18260 PF02774 Semialdehyde dehydrogenase, dimerisation domain DS748_RS18265 PF01416 tRNA pseudouridine synthase DS748_RS18270 PF09335 SNARE associated Golgi protein DS748_RS18275 PF01039 Carboxyl transferase domain DS748_RS18275 PF17848 Acetyl-coA carboxylase zinc finger domain DS748_RS18280 PF08245 Mur ligase middle domain DS748_RS18280 PF02875 Mur ligase family, glutamate ligase domain DS748_RS18285 PF05036 Sporulation related domain DS748_RS18290 PF02674 Colicin V production protein DS748_RS18295 PF00156 Phosphoribosyl transferase domain DS748_RS18300 PF00158 Sigma-54 interaction domain DS748_RS18300 PF13426 PAS domain DS748_RS18300 PF02954 Bacterial regulatory protein, Fis family DS748_RS18305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DS748_RS18305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DS748_RS18310 PF13520 Amino acid permease DS748_RS18315 PF01168 Alanine racemase, N-terminal domain DS748_RS18320 PF00324 Amino acid permease DS748_RS18325 PF02441 Flavoprotein DS748_RS18335 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS748_RS18340 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS748_RS18345 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS18350 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS18355 PF00005 ABC transporter DS748_RS18360 PF01370 NAD dependent epimerase/dehydratase family DS748_RS18360 PF08338 Domain of unknown function (DUF1731) DS748_RS18365 PF02798 Glutathione S-transferase, N-terminal domain DS748_RS18365 PF00043 Glutathione S-transferase, C-terminal domain DS748_RS18370 PF14834 Glutathione S-transferase, C-terminal domain DS748_RS18370 PF02798 Glutathione S-transferase, N-terminal domain DS748_RS18375 PF12850 Calcineurin-like phosphoesterase superfamily domain DS748_RS18380 PF00293 NUDIX domain DS748_RS18385 PF00356 Bacterial regulatory proteins, lacI family DS748_RS18395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS748_RS18405 PF03611 PTS system sugar-specific permease component DS748_RS18410 PF00456 Transketolase, thiamine diphosphate binding domain DS748_RS18415 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DS748_RS18415 PF02780 Transketolase, C-terminal domain DS748_RS18415 PF02779 Transketolase, pyrimidine binding domain DS748_RS18420 PF03606 C4-dicarboxylate anaerobic carrier DS748_RS18425 PF07085 DRTGG domain DS748_RS18425 PF01515 Phosphate acetyl/butaryl transferase DS748_RS18430 PF00871 Acetokinase family DS748_RS18440 PF04217 Protein of unknown function, DUF412 DS748_RS18445 PF03887 YfbU domain DS748_RS18450 PF13419 Haloacid dehalogenase-like hydrolase DS748_RS18455 PF03600 Citrate transporter DS748_RS18455 PF02080 TrkA-C domain DS748_RS18470 PF00155 Aminotransferase class I and II DS748_RS18480 PF03466 LysR substrate binding domain DS748_RS18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS18490 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DS748_RS18495 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DS748_RS18500 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DS748_RS18500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DS748_RS18510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DS748_RS18510 PF10531 SLBB domain DS748_RS18510 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DS748_RS18515 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DS748_RS18515 PF01568 Molydopterin dinucleotide binding domain DS748_RS18515 PF00384 Molybdopterin oxidoreductase DS748_RS18515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DS748_RS18520 PF00146 NADH dehydrogenase DS748_RS18525 PF12838 4Fe-4S dicluster domain DS748_RS18530 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DS748_RS18535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DS748_RS18540 PF00361 Proton-conducting membrane transporter DS748_RS18540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DS748_RS18545 PF00361 Proton-conducting membrane transporter DS748_RS18550 PF00361 Proton-conducting membrane transporter DS748_RS18555 PF01584 CheW-like domain DS748_RS18555 PF00072 Response regulator receiver domain DS748_RS18560 PF12706 Beta-lactamase superfamily domain DS748_RS18565 PF13673 Acetyltransferase (GNAT) domain DS748_RS18570 PF05957 Bacterial protein of unknown function (DUF883) DS748_RS18575 PF00425 chorismate binding enzyme DS748_RS18580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DS748_RS18580 PF16582 Middle domain of thiamine pyrophosphate DS748_RS18580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS748_RS18585 PF12697 Alpha/beta hydrolase family DS748_RS18590 PF00378 Enoyl-CoA hydratase/isomerase DS748_RS18595 PF13378 Enolase C-terminal domain-like DS748_RS18600 PF00501 AMP-binding enzyme DS748_RS18600 PF13193 AMP-binding enzyme C-terminal domain DS748_RS18615 PF00892 EamA-like transporter family DS748_RS18620 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DS748_RS18625 PF01522 Polysaccharide deacetylase DS748_RS18630 PF00551 Formyl transferase DS748_RS18630 PF01370 NAD dependent epimerase/dehydratase family DS748_RS18630 PF02911 Formyl transferase, C-terminal domain DS748_RS18635 PF00535 Glycosyl transferase family 2 DS748_RS18640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DS748_RS18645 PF00300 Histidine phosphatase superfamily (branch 1) DS748_RS18650 PF00293 NUDIX domain DS748_RS18655 PF07437 YfaZ precursor DS748_RS18660 PF00994 Probable molybdopterin binding domain DS748_RS18665 PF09339 IclR helix-turn-helix domain DS748_RS18665 PF01614 Bacterial transcriptional regulator DS748_RS18670 PF13378 Enolase C-terminal domain-like DS748_RS18670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS748_RS18675 PF07690 Major Facilitator Superfamily DS748_RS18680 PF03328 HpcH/HpaI aldolase/citrate lyase family DS748_RS18685 PF00994 Probable molybdopterin binding domain DS748_RS18700 PF02754 Cysteine-rich domain DS748_RS18700 PF13183 4Fe-4S dicluster domain DS748_RS18705 PF00890 FAD binding domain DS748_RS18710 PF01266 FAD dependent oxidoreductase DS748_RS18710 PF04324 BFD-like [2Fe-2S] binding domain DS748_RS18720 PF07690 Major Facilitator Superfamily DS748_RS18725 PF03009 Glycerophosphoryl diester phosphodiesterase family DS748_RS18730 PF03466 LysR substrate binding domain DS748_RS18730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS18735 PF07690 Major Facilitator Superfamily DS748_RS18740 PF00111 2Fe-2S iron-sulfur cluster binding domain DS748_RS18745 PF00268 Ribonucleotide reductase, small chain DS748_RS18750 PF03477 ATP cone domain DS748_RS18750 PF02867 Ribonucleotide reductase, barrel domain DS748_RS18750 PF00317 Ribonucleotide reductase, all-alpha domain DS748_RS18770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS748_RS18770 PF13378 Enolase C-terminal domain-like DS748_RS18775 PF03989 DNA gyrase C-terminal domain, beta-propeller DS748_RS18775 PF00521 DNA gyrase/topoisomerase IV, subunit A DS748_RS18785 PF01797 Transposase IS200 like DS748_RS18790 PF00072 Response regulator receiver domain DS748_RS18790 PF09456 RcsC Alpha-Beta-Loop (ABL) DS748_RS18790 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS18790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS18795 PF00196 Bacterial regulatory proteins, luxR family DS748_RS18795 PF00072 Response regulator receiver domain DS748_RS18800 PF16359 RcsD-ABL domain DS748_RS18800 PF01627 Hpt domain DS748_RS18800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS18805 PF00267 Gram-negative porin DS748_RS18810 PF02424 ApbE family DS748_RS18815 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DS748_RS18815 PF12833 Helix-turn-helix domain DS748_RS18815 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DS748_RS18815 PF02805 Metal binding domain of Ada DS748_RS18820 PF13532 2OG-Fe(II) oxygenase superfamily DS748_RS18825 PF00005 ABC transporter DS748_RS18830 PF03974 Ecotin DS748_RS18835 PF00037 4Fe-4S binding domain DS748_RS18835 PF12800 4Fe-4S binding domain DS748_RS18835 PF13187 4Fe-4S dicluster domain DS748_RS18840 PF03927 NapD protein DS748_RS18845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DS748_RS18845 PF01568 Molydopterin dinucleotide binding domain DS748_RS18845 PF00384 Molybdopterin oxidoreductase DS748_RS18850 PF12838 4Fe-4S dicluster domain DS748_RS18850 PF12800 4Fe-4S binding domain DS748_RS18855 PF13237 4Fe-4S dicluster domain DS748_RS18855 PF12801 4Fe-4S binding domain DS748_RS18860 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DS748_RS18865 PF03264 NapC/NirT cytochrome c family, N-terminal region DS748_RS18870 PF00005 ABC transporter DS748_RS18875 PF03379 CcmB protein DS748_RS18880 PF01578 Cytochrome C assembly protein DS748_RS18885 PF04995 Heme exporter protein D (CcmD) DS748_RS18890 PF03100 CcmE DS748_RS18895 PF01578 Cytochrome C assembly protein DS748_RS18895 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DS748_RS18900 PF08534 Redoxin DS748_RS18905 PF03918 Cytochrome C biogenesis protein DS748_RS18910 PF00196 Bacterial regulatory proteins, luxR family DS748_RS18910 PF00072 Response regulator receiver domain DS748_RS18930 PF03335 Phage tail fibre repeat DS748_RS18930 PF07484 Phage Tail Collar Domain DS748_RS18930 PF08400 Prophage tail fibre N-terminal DS748_RS18940 PF12468 Type III secretion system leucine rich repeat protein DS748_RS18940 PF14496 C-terminal novel E3 ligase, LRR-interacting DS748_RS18955 PF11893 Domain of unknown function (DUF3413) DS748_RS18955 PF00884 Sulfatase DS748_RS18960 PF07208 Protein of unknown function (DUF1414) DS748_RS18965 PF04245 37-kD nucleoid-associated bacterial protein DS748_RS18975 PF01386 Ribosomal L25p family DS748_RS18980 PF00271 Helicase conserved C-terminal domain DS748_RS18980 PF04851 Type III restriction enzyme, res subunit DS748_RS18985 PF00849 RNA pseudouridylate synthase DS748_RS18985 PF01479 S4 domain DS748_RS18990 PF07690 Major Facilitator Superfamily DS748_RS18995 PF13989 YejG-like protein DS748_RS19000 PF00005 ABC transporter DS748_RS19000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DS748_RS19005 PF12911 N-terminal TM domain of oligopeptide transport permease C DS748_RS19005 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS19010 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS19015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS748_RS19020 PF00563 EAL domain DS748_RS19020 PF12792 CSS motif domain associated with EAL DS748_RS19025 PF00877 NlpC/P60 family DS748_RS19030 PF01569 PAP2 superfamily DS748_RS19035 PF07683 Cobalamin synthesis protein cobW C-terminal domain DS748_RS19035 PF02492 CobW/HypB/UreG, nucleotide-binding domain DS748_RS19040 PF01132 Elongation factor P (EF-P) OB domain DS748_RS19040 PF08207 Elongation factor P (EF-P) KOW-like domain DS748_RS19040 PF09285 Elongation factor P, C-terminal DS748_RS19050 PF03692 Putative zinc- or iron-chelating domain DS748_RS19065 PF07690 Major Facilitator Superfamily DS748_RS19070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS748_RS19070 PF00381 PTS HPr component phosphorylation site DS748_RS19075 PF00294 pfkB family carbohydrate kinase DS748_RS19080 PF02378 Phosphotransferase system, EIIC DS748_RS19080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DS748_RS19085 PF01261 Xylose isomerase-like TIM barrel DS748_RS19090 PF03601 Conserved hypothetical protein 698 DS748_RS19095 PF03466 LysR substrate binding domain DS748_RS19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS19100 PF00324 Amino acid permease DS748_RS19110 PF00593 TonB dependent receptor DS748_RS19110 PF07715 TonB-dependent Receptor Plug Domain DS748_RS19120 PF18429 Domain of unknown function (DUF5609) DS748_RS19125 PF03315 Serine dehydratase beta chain DS748_RS19125 PF03313 Serine dehydratase alpha chain DS748_RS19135 PF00756 Putative esterase DS748_RS19140 PF01227 GTP cyclohydrolase I DS748_RS19145 PF04235 Protein of unknown function (DUF418) DS748_RS19150 PF00356 Bacterial regulatory proteins, lacI family DS748_RS19155 PF13407 Periplasmic binding protein domain DS748_RS19165 PF02653 Branched-chain amino acid transport system / permease component DS748_RS19175 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS748_RS19175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DS748_RS19180 PF10808 Protein of unknown function (DUF2542) DS748_RS19185 PF02698 DUF218 domain DS748_RS19190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DS748_RS19190 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region DS748_RS19195 PF04172 LrgB-like family DS748_RS19200 PF03788 LrgA family DS748_RS19205 PF03466 LysR substrate binding domain DS748_RS19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS19210 PF07690 Major Facilitator Superfamily DS748_RS19215 PF07883 Cupin domain DS748_RS19220 PF01557 Fumarylacetoacetate (FAA) hydrolase family DS748_RS19225 PF14497 Glutathione S-transferase, C-terminal domain DS748_RS19225 PF02798 Glutathione S-transferase, N-terminal domain DS748_RS19230 PF01494 FAD binding domain DS748_RS19235 PF01207 Dihydrouridine synthase (Dus) DS748_RS19245 PF02321 Outer membrane efflux protein DS748_RS19255 PF09335 SNARE associated Golgi protein DS748_RS19260 PF04893 Yip1 domain DS748_RS19265 PF00768 D-alanyl-D-alanine carboxypeptidase DS748_RS19270 PF09330 D-lactate dehydrogenase, membrane binding DS748_RS19270 PF01565 FAD binding domain DS748_RS19275 PF00933 Glycosyl hydrolase family 3 N terminal domain DS748_RS19275 PF01915 Glycosyl hydrolase family 3 C-terminal domain DS748_RS19275 PF14310 Fibronectin type III-like domain DS748_RS19280 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DS748_RS19285 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS19290 PF00005 ABC transporter DS748_RS19295 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS19305 PF13411 MerR HTH family regulatory protein DS748_RS19310 PF07694 5TMR of 5TMR-LYT DS748_RS19310 PF06580 Histidine kinase DS748_RS19315 PF04397 LytTr DNA-binding domain DS748_RS19315 PF00072 Response regulator receiver domain DS748_RS19320 PF07308 Protein of unknown function (DUF1456) DS748_RS19330 PF06998 Protein of unknown function (DUF1307) DS748_RS19335 PF01588 Putative tRNA binding domain DS748_RS19335 PF09334 tRNA synthetases class I (M) DS748_RS19340 PF10609 NUBPL iron-transfer P-loop NTPase DS748_RS19355 PF02753 Pili assembly chaperone PapD, C-terminal domain DS748_RS19355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DS748_RS19360 PF13953 PapC C-terminal domain DS748_RS19360 PF00577 Outer membrane usher protein DS748_RS19360 PF13954 PapC N-terminal domain DS748_RS19365 PF00419 Fimbrial protein DS748_RS19370 PF11776 Nickel/cobalt transporter regulator DS748_RS19375 PF02110 Hydroxyethylthiazole kinase family DS748_RS19380 PF08543 Phosphomethylpyrimidine kinase DS748_RS19385 PF07702 UTRA domain DS748_RS19385 PF00392 Bacterial regulatory proteins, gntR family DS748_RS19390 PF00294 pfkB family carbohydrate kinase DS748_RS19395 PF03747 ADP-ribosylglycohydrolase DS748_RS19400 PF03825 Nucleoside H+ symporter DS748_RS19405 PF01791 DeoC/LacD family aldolase DS748_RS19410 PF00781 Diacylglycerol kinase catalytic domain DS748_RS19420 PF05932 Tir chaperone protein (CesT) family DS748_RS19430 PF16325 Peptidase family U32 C-terminal domain DS748_RS19430 PF01136 Peptidase family U32 DS748_RS19460 PF07262 CDI immunity protein DS748_RS19525 PF00072 Response regulator receiver domain DS748_RS19525 PF00486 Transcriptional regulatory protein, C terminal DS748_RS19530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS19530 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS19530 PF00672 HAMP domain DS748_RS19535 PF07690 Major Facilitator Superfamily DS748_RS19540 PF00873 AcrB/AcrD/AcrF family DS748_RS19545 PF00873 AcrB/AcrD/AcrF family DS748_RS19550 PF13533 Biotin-lipoyl like DS748_RS19560 PF00012 Hsp70 protein DS748_RS19565 PF00730 HhH-GPD superfamily base excision DNA repair protein DS748_RS19565 PF06029 AlkA N-terminal domain DS748_RS19570 PF13426 PAS domain DS748_RS19570 PF08448 PAS fold DS748_RS19570 PF08447 PAS fold DS748_RS19570 PF00563 EAL domain DS748_RS19570 PF00990 Diguanylate cyclase, GGDEF domain DS748_RS19570 PF05231 MASE1 DS748_RS19575 PF00485 Phosphoribulokinase / Uridine kinase family DS748_RS19580 PF00692 dUTPase DS748_RS19585 PF05170 AsmA family DS748_RS19590 PF03741 Integral membrane protein TerC family DS748_RS19590 PF03471 Transporter associated domain DS748_RS19590 PF00571 CBS domain DS748_RS19595 PF10531 SLBB domain DS748_RS19595 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DS748_RS19595 PF02563 Polysaccharide biosynthesis/export protein DS748_RS19600 PF01451 Low molecular weight phosphotyrosine protein phosphatase DS748_RS19605 PF02706 Chain length determinant protein DS748_RS19605 PF13807 G-rich domain on putative tyrosine kinase DS748_RS19605 PF13614 AAA domain DS748_RS19610 PF00535 Glycosyl transferase family 2 DS748_RS19615 PF00132 Bacterial transferase hexapeptide (six repeats) DS748_RS19620 PF13439 Glycosyltransferase Family 4 DS748_RS19620 PF00534 Glycosyl transferases group 1 DS748_RS19630 PF00535 Glycosyl transferase family 2 DS748_RS19635 PF00132 Bacterial transferase hexapeptide (six repeats) DS748_RS19640 PF16363 GDP-mannose 4,6 dehydratase DS748_RS19645 PF01370 NAD dependent epimerase/dehydratase family DS748_RS19650 PF00293 NUDIX domain DS748_RS19655 PF00534 Glycosyl transferases group 1 DS748_RS19655 PF13579 Glycosyl transferase 4-like domain DS748_RS19660 PF00483 Nucleotidyl transferase DS748_RS19660 PF01050 Mannose-6-phosphate isomerase DS748_RS19665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DS748_RS19665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DS748_RS19665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DS748_RS19665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DS748_RS19670 PF02397 Bacterial sugar transferase DS748_RS19685 PF13439 Glycosyltransferase Family 4 DS748_RS19685 PF00534 Glycosyl transferases group 1 DS748_RS19695 PF00483 Nucleotidyl transferase DS748_RS19700 PF16363 GDP-mannose 4,6 dehydratase DS748_RS19705 PF04321 RmlD substrate binding domain DS748_RS19710 PF00483 Nucleotidyl transferase DS748_RS19715 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DS748_RS19720 PF00970 Oxidoreductase FAD-binding domain DS748_RS19720 PF00111 2Fe-2S iron-sulfur cluster binding domain DS748_RS19720 PF00175 Oxidoreductase NAD-binding domain DS748_RS19725 PF00483 Nucleotidyl transferase DS748_RS19730 PF16363 GDP-mannose 4,6 dehydratase DS748_RS19735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DS748_RS19740 PF01370 NAD dependent epimerase/dehydratase family DS748_RS19745 PF16363 GDP-mannose 4,6 dehydratase DS748_RS19755 PF00535 Glycosyl transferase family 2 DS748_RS19760 PF13439 Glycosyltransferase Family 4 DS748_RS19760 PF00534 Glycosyl transferases group 1 DS748_RS19765 PF00535 Glycosyl transferase family 2 DS748_RS19770 PF01050 Mannose-6-phosphate isomerase DS748_RS19770 PF00483 Nucleotidyl transferase DS748_RS19775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DS748_RS19775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DS748_RS19775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DS748_RS19775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DS748_RS19780 PF02397 Bacterial sugar transferase DS748_RS19785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DS748_RS19785 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DS748_RS19795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DS748_RS19795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DS748_RS19800 PF02706 Chain length determinant protein DS748_RS19805 PF01502 Phosphoribosyl-AMP cyclohydrolase DS748_RS19805 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DS748_RS19810 PF00977 Histidine biosynthesis protein DS748_RS19815 PF00977 Histidine biosynthesis protein DS748_RS19820 PF00117 Glutamine amidotransferase class-I DS748_RS19825 PF00475 Imidazoleglycerol-phosphate dehydratase DS748_RS19830 PF00155 Aminotransferase class I and II DS748_RS19835 PF00815 Histidinol dehydrogenase DS748_RS19840 PF01634 ATP phosphoribosyltransferase DS748_RS19840 PF08029 HisG, C-terminal domain DS748_RS19850 PF01370 NAD dependent epimerase/dehydratase family DS748_RS19855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS19855 PF03466 LysR substrate binding domain DS748_RS19865 PF13520 Amino acid permease DS748_RS19870 PF08411 Exonuclease C-terminal DS748_RS19870 PF00929 Exonuclease DS748_RS19885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DS748_RS19885 PF00384 Molybdopterin oxidoreductase DS748_RS19885 PF01568 Molydopterin dinucleotide binding domain DS748_RS19890 PF13247 4Fe-4S dicluster domain DS748_RS19890 PF12800 4Fe-4S binding domain DS748_RS19895 PF01292 Prokaryotic cytochrome b561 DS748_RS19905 PF06445 GyrI-like small molecule binding domain DS748_RS19910 PF04632 Fusaric acid resistance protein family DS748_RS19915 PF04363 Protein of unknown function (DUF496) DS748_RS19920 PF00288 GHMP kinases N terminal domain DS748_RS19925 PF00871 Acetokinase family DS748_RS19930 PF10662 Ethanolamine utilisation - propanediol utilisation DS748_RS19935 PF00936 BMC domain DS748_RS19945 PF13237 4Fe-4S dicluster domain DS748_RS19945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DS748_RS19945 PF10531 SLBB domain DS748_RS19945 PF13375 RnfC Barrel sandwich hybrid domain DS748_RS19950 PF00171 Aldehyde dehydrogenase family DS748_RS19950 PF00465 Iron-containing alcohol dehydrogenase DS748_RS19955 PF00171 Aldehyde dehydrogenase family DS748_RS19960 PF01923 Cobalamin adenosyltransferase DS748_RS19975 PF06130 Phosphate propanoyltransferase DS748_RS19980 PF00936 BMC domain DS748_RS19985 PF00936 BMC domain DS748_RS19995 PF08841 Diol dehydratase reactivase ATPase-like domain DS748_RS19995 PF18427 DD-reactivating factor swiveling domain DS748_RS20000 PF02287 Dehydratase small subunit DS748_RS20005 PF02288 Dehydratase medium subunit DS748_RS20010 PF02286 Dehydratase large subunit DS748_RS20020 PF00936 BMC domain DS748_RS20025 PF00230 Major intrinsic protein DS748_RS20030 PF10114 Sensory domain found in PocR DS748_RS20030 PF12833 Helix-turn-helix domain DS748_RS20035 PF07685 CobB/CobQ-like glutamine amidotransferase domain DS748_RS20035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DS748_RS20040 PF03186 CobD/Cbib protein DS748_RS20045 PF02570 Precorrin-8X methylmutase DS748_RS20050 PF01888 CbiD DS748_RS20055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DS748_RS20060 PF05175 Methyltransferase small domain DS748_RS20065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DS748_RS20070 PF11760 Cobalamin synthesis G N-terminal DS748_RS20070 PF11761 Cobalamin biosynthesis central region DS748_RS20070 PF01890 Cobalamin synthesis G C-terminus DS748_RS20075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DS748_RS20080 PF02571 Precorrin-6x reductase CbiJ/CobK DS748_RS20085 PF06180 Cobalt chelatase (CbiK) DS748_RS20090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DS748_RS20100 PF02553 Cobalt transport protein component CbiN DS748_RS20105 PF02361 Cobalt transport protein DS748_RS20110 PF00005 ABC transporter DS748_RS20115 PF07685 CobB/CobQ-like glutamine amidotransferase domain DS748_RS20120 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DS748_RS20125 PF02654 Cobalamin-5-phosphate synthase DS748_RS20130 PF02277 Phosphoribosyltransferase DS748_RS20135 PF03734 L,D-transpeptidase catalytic domain DS748_RS20135 PF17969 L,D-transpeptidase C-terminal domain DS748_RS20145 PF01554 MatE DS748_RS20170 PF01048 Phosphorylase superfamily DS748_RS20170 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DS748_RS20190 PF06167 Glucose-regulated metallo-peptidase M90 DS748_RS20210 PF00717 Peptidase S24-like DS748_RS20215 PF00817 impB/mucB/samB family DS748_RS20215 PF11799 impB/mucB/samB family C-terminal domain DS748_RS20215 PF13438 Domain of unknown function (DUF4113) DS748_RS20220 PF00313 'Cold-shock' DNA-binding domain DS748_RS20230 PF00267 Gram-negative porin DS748_RS20240 PF01966 HD domain DS748_RS20245 PF18284 DNA methylase N-terminal domain DS748_RS20245 PF00145 C-5 cytosine-specific DNA methylase DS748_RS20250 PF03852 DNA mismatch endonuclease Vsr DS748_RS20255 PF00892 EamA-like transporter family DS748_RS20265 PF09926 Uncharacterized small protein (DUF2158) DS748_RS20270 PF17151 Periplasmic sensor domain DS748_RS20270 PF00990 Diguanylate cyclase, GGDEF domain DS748_RS20280 PF10733 Protein of unknown function (DUF2525) DS748_RS20285 PF10781 Dextransucrase DSRB DS748_RS20290 PF00196 Bacterial regulatory proteins, luxR family DS748_RS20295 PF01311 Bacterial export proteins, family 1 DS748_RS20300 PF01313 Bacterial export proteins, family 3 DS748_RS20305 PF00813 FliP family DS748_RS20310 PF04347 Flagellar biosynthesis protein, FliO DS748_RS20315 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DS748_RS20315 PF16973 Flagellar motor switch protein FliN N-terminal DS748_RS20320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DS748_RS20320 PF02154 Flagellar motor switch protein FliM DS748_RS20325 PF03748 Flagellar basal body-associated protein FliL DS748_RS20330 PF02120 Flagellar hook-length control protein FliK DS748_RS20335 PF02050 Flagellar FliJ protein DS748_RS20340 PF18269 T3SS EscN ATPase C-terminal domain DS748_RS20340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DS748_RS20345 PF02108 Flagellar assembly protein FliH DS748_RS20350 PF01706 FliG C-terminal domain DS748_RS20350 PF14842 FliG N-terminal domain DS748_RS20350 PF14841 FliG middle domain DS748_RS20355 PF01514 Secretory protein of YscJ/FliF family DS748_RS20355 PF08345 Flagellar M-ring protein C-terminal DS748_RS20360 PF02049 Flagellar hook-basal body complex protein FliE DS748_RS20370 PF01206 Sulfurtransferase TusA DS748_RS20375 PF04143 Sulphur transport DS748_RS20385 PF13987 YedD-like protein DS748_RS20390 PF00128 Alpha amylase, catalytic domain DS748_RS20390 PF02806 Alpha amylase, C-terminal all-beta domain DS748_RS20395 PF05400 Flagellar protein FliT DS748_RS20400 PF02561 Flagellar protein FliS DS748_RS20405 PF07196 Flagellin hook IN motif DS748_RS20405 PF07195 Flagellar hook-associated protein 2 C-terminus DS748_RS20405 PF02465 Flagellar hook-associated protein 2 N-terminus DS748_RS20410 PF00700 Bacterial flagellin C-terminal helical region DS748_RS20410 PF08884 Flagellin D3 domain DS748_RS20410 PF00669 Bacterial flagellin N-terminal helical region DS748_RS20420 PF04545 Sigma-70, region 4 DS748_RS20420 PF04539 Sigma-70 region 3 DS748_RS20420 PF04542 Sigma-70 region 2 DS748_RS20425 PF02899 Phage integrase, N-terminal SAM-like domain DS748_RS20430 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS748_RS20435 PF00291 Pyridoxal-phosphate dependent enzyme DS748_RS20440 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS20445 PF00005 ABC transporter DS748_RS20450 PF03472 Autoinducer binding domain DS748_RS20450 PF00196 Bacterial regulatory proteins, luxR family DS748_RS20455 PF10769 Protein of unknown function (DUF2594) DS748_RS20465 PF00196 Bacterial regulatory proteins, luxR family DS748_RS20465 PF00072 Response regulator receiver domain DS748_RS20470 PF08459 UvrC Helix-hairpin-helix N-terminal DS748_RS20470 PF01541 GIY-YIG catalytic domain DS748_RS20470 PF02151 UvrB/uvrC motif DS748_RS20475 PF01066 CDP-alcohol phosphatidyltransferase DS748_RS20510 PF03695 Uncharacterised protein family (UPF0149) DS748_RS20510 PF02810 SEC-C motif DS748_RS20515 PF03222 Tryptophan/tyrosine permease family DS748_RS20520 PF10678 Protein of unknown function (DUF2492) DS748_RS20525 PF00210 Ferritin-like domain DS748_RS20530 PF13992 YecR-like lipoprotein DS748_RS20535 PF00210 Ferritin-like domain DS748_RS20550 PF02358 Trehalose-phosphatase DS748_RS20555 PF00982 Glycosyltransferase family 20 DS748_RS20570 PF05247 Flagellar transcriptional activator (FlhD) DS748_RS20575 PF05280 Flagellar transcriptional activator (FlhC) DS748_RS20580 PF01618 MotA/TolQ/ExbB proton channel family DS748_RS20585 PF13677 Membrane MotB of proton-channel complex MotA/MotB DS748_RS20585 PF00691 OmpA family DS748_RS20590 PF09078 CheY binding DS748_RS20590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS20590 PF02895 Signal transducing histidine kinase, homodimeric domain DS748_RS20590 PF01584 CheW-like domain DS748_RS20590 PF01627 Hpt domain DS748_RS20595 PF01584 CheW-like domain DS748_RS20600 PF00672 HAMP domain DS748_RS20600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS748_RS20600 PF02203 Tar ligand binding domain homologue DS748_RS20605 PF01739 CheR methyltransferase, SAM binding domain DS748_RS20605 PF03705 CheR methyltransferase, all-alpha domain DS748_RS20610 PF01339 CheB methylesterase DS748_RS20610 PF00072 Response regulator receiver domain DS748_RS20615 PF00072 Response regulator receiver domain DS748_RS20620 PF04344 Chemotaxis phosphatase, CheZ DS748_RS20625 PF01312 FlhB HrpN YscU SpaS Family DS748_RS20630 PF00771 FHIPEP family DS748_RS20635 PF06366 Flagellar protein FlhE DS748_RS20640 PF07470 Glycosyl Hydrolase Family 88 DS748_RS20650 PF03485 Arginyl tRNA synthetase N terminal domain DS748_RS20650 PF00750 tRNA synthetases class I (R) DS748_RS20650 PF05746 DALR anticodon binding domain DS748_RS20655 PF06185 YecM protein DS748_RS20660 PF03932 CutC family DS748_RS20665 PF08003 Protein of unknown function (DUF1698) DS748_RS20670 PF13649 Methyltransferase domain DS748_RS20675 PF01124 MAPEG family DS748_RS20680 PF01904 Protein of unknown function DUF72 DS748_RS20685 PF00857 Isochorismatase family DS748_RS20690 PF01336 OB-fold nucleic acid binding domain DS748_RS20690 PF00152 tRNA synthetases class II (D, K and N) DS748_RS20690 PF02938 GAD domain DS748_RS20695 PF00293 NUDIX domain DS748_RS20700 PF01709 Transcriptional regulator DS748_RS20705 PF02075 Crossover junction endodeoxyribonuclease RuvC DS748_RS20710 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DS748_RS20720 PF07499 RuvA, C-terminal domain DS748_RS20720 PF01330 RuvA N terminal domain DS748_RS20725 PF17864 RuvB AAA lid domain DS748_RS20725 PF05496 Holliday junction DNA helicase RuvB P-loop domain DS748_RS20725 PF05491 RuvB C-terminal winged helix domain DS748_RS20730 PF00950 ABC 3 transport family DS748_RS20735 PF00005 ABC transporter DS748_RS20740 PF01297 Zinc-uptake complex component A periplasmic DS748_RS20745 PF01476 LysM domain DS748_RS20745 PF08525 Opacity-associated protein A N-terminal motif DS748_RS20745 PF01551 Peptidase family M23 DS748_RS20750 PF03279 Bacterial lipid A biosynthesis acyltransferase DS748_RS20755 PF00224 Pyruvate kinase, barrel domain DS748_RS20755 PF02887 Pyruvate kinase, alpha/beta domain DS748_RS20760 PF01418 Helix-turn-helix domain, rpiR family DS748_RS20760 PF01380 SIS domain DS748_RS20770 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DS748_RS20770 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DS748_RS20775 PF00920 Dehydratase family DS748_RS20780 PF01081 KDPG and KHG aldolase DS748_RS20785 PF02222 ATP-grasp domain DS748_RS20790 PF07130 YebG protein DS748_RS20795 PF13995 YebF-like protein DS748_RS20800 PF04391 Protein of unknown function (DUF533) DS748_RS20805 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DS748_RS20805 PF00326 Prolyl oligopeptidase family DS748_RS20810 PF00929 Exonuclease DS748_RS20815 PF00795 Carbon-nitrogen hydrolase DS748_RS20820 PF06440 DNA polymerase III, theta subunit DS748_RS20825 PF04234 CopC domain DS748_RS20830 PF05425 Copper resistance protein D DS748_RS20835 PF10709 Protein of unknown function (DUF2511) DS748_RS20860 PF00990 Diguanylate cyclase, GGDEF domain DS748_RS20860 PF01590 GAF domain DS748_RS20860 PF00563 EAL domain DS748_RS20860 PF00360 Phytochrome region DS748_RS20865 PF14863 Alkyl sulfatase dimerisation DS748_RS20865 PF00753 Metallo-beta-lactamase superfamily DS748_RS20865 PF14864 Alkyl sulfatase C-terminal DS748_RS20885 PF00892 EamA-like transporter family DS748_RS20915 PF03129 Anticodon binding domain DS748_RS20915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DS748_RS20915 PF02824 TGS domain DS748_RS20915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DS748_RS20935 PF07166 Protein of unknown function (DUF1398) DS748_RS20950 PF00149 Calcineurin-like phosphoesterase DS748_RS20955 PF07358 Protein of unknown function (DUF1482) DS748_RS20960 PF07351 Protein of unknown function (DUF1480) DS748_RS20965 PF01189 16S rRNA methyltransferase RsmB/F DS748_RS20965 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DS748_RS20965 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DS748_RS20970 PF02470 MlaD protein DS748_RS20975 PF04403 Paraquat-inducible protein A DS748_RS20980 PF13185 GAF domain DS748_RS20985 PF17516 ProQ C-terminal domain DS748_RS20985 PF04352 ProQ/FINO family DS748_RS20990 PF11818 C-terminal domain of tail specific protease (DUF3340) DS748_RS20990 PF00595 PDZ domain DS748_RS20990 PF03572 Peptidase family S41 DS748_RS20990 PF17804 Tail specific protease N-terminal domain DS748_RS20995 PF01435 Peptidase family M48 DS748_RS21005 PF09339 IclR helix-turn-helix domain DS748_RS21005 PF01614 Bacterial transcriptional regulator DS748_RS21010 PF13996 YobH-like protein DS748_RS21015 PF13998 MgrB protein DS748_RS21020 PF13974 YebO-like protein DS748_RS21025 PF10736 Protein of unknown function (DUF2627) DS748_RS21030 PF00313 'Cold-shock' DNA-binding domain DS748_RS21035 PF00905 Penicillin binding protein transpeptidase domain DS748_RS21035 PF03717 Penicillin-binding Protein dimerisation domain DS748_RS21040 PF13847 Methyltransferase domain DS748_RS21045 PF02659 Putative manganese efflux pump DS748_RS21050 PF06173 Protein of unknown function (DUF986) DS748_RS21055 PF03613 PTS system mannose/fructose/sorbose family IID component DS748_RS21060 PF03609 PTS system sorbose-specific iic component DS748_RS21065 PF03610 PTS system fructose IIA component DS748_RS21065 PF03830 PTS system sorbose subfamily IIB component DS748_RS21070 PF03471 Transporter associated domain DS748_RS21070 PF03741 Integral membrane protein TerC family DS748_RS21075 PF00563 EAL domain DS748_RS21075 PF12792 CSS motif domain associated with EAL DS748_RS21080 PF03315 Serine dehydratase beta chain DS748_RS21080 PF03313 Serine dehydratase alpha chain DS748_RS21085 PF00293 NUDIX domain DS748_RS21090 PF00425 chorismate binding enzyme DS748_RS21090 PF04715 Anthranilate synthase component I, N terminal region DS748_RS21095 PF03701 Uncharacterised protein family (UPF0181) DS748_RS21100 PF01042 Endoribonuclease L-PSP DS748_RS21105 PF04851 Type III restriction enzyme, res subunit DS748_RS21105 PF13307 Helicase C-terminal domain DS748_RS21110 PF00814 Glycoprotease family DS748_RS21115 PF03843 Outer membrane lipoprotein Slp family DS748_RS21120 PF13193 AMP-binding enzyme C-terminal domain DS748_RS21120 PF00501 AMP-binding enzyme DS748_RS21125 PF01612 3'-5' exonuclease DS748_RS21125 PF00570 HRDC domain DS748_RS21130 PF03776 Septum formation topological specificity factor MinE DS748_RS21135 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DS748_RS21140 PF05209 Septum formation inhibitor MinC, N-terminal domain DS748_RS21140 PF03775 Septum formation inhibitor MinC, C-terminal domain DS748_RS21145 PF05166 YcgL domain DS748_RS21150 PF01557 Fumarylacetoacetate (FAA) hydrolase family DS748_RS21155 PF03692 Putative zinc- or iron-chelating domain DS748_RS21165 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system DS748_RS21175 PF02600 Disulfide bond formation protein DsbB DS748_RS21180 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DS748_RS21185 PF00392 Bacterial regulatory proteins, gntR family DS748_RS21185 PF07840 FadR C-terminal domain DS748_RS21190 PF04293 SpoVR like protein DS748_RS21195 PF01266 FAD dependent oxidoreductase DS748_RS21200 PF01168 Alanine racemase, N-terminal domain DS748_RS21200 PF00842 Alanine racemase, C-terminal domain DS748_RS21205 PF02080 TrkA-C domain DS748_RS21205 PF00999 Sodium/hydrogen exchanger family DS748_RS21205 PF03471 Transporter associated domain DS748_RS21210 PF02016 LD-carboxypeptidase N-terminal domain DS748_RS21210 PF17676 LD-carboxypeptidase C-terminal domain DS748_RS21215 PF01464 Transglycosylase SLT domain DS748_RS21220 PF07317 Flagellar regulator YcgR DS748_RS21220 PF07238 PilZ domain DS748_RS21225 PF04226 Transglycosylase associated protein DS748_RS21235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DS748_RS21235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DS748_RS21240 PF08173 Membrane bound YbgT-like protein DS748_RS21245 PF02322 Cytochrome bd terminal oxidase subunit II DS748_RS21255 PF04809 HupH hydrogenase expression protein, C-terminal conserved region DS748_RS21260 PF07449 Hydrogenase-1 expression protein HyaE DS748_RS21265 PF01750 Hydrogenase maturation protease DS748_RS21270 PF01292 Prokaryotic cytochrome b561 DS748_RS21290 PF06071 Protein of unknown function (DUF933) DS748_RS21290 PF01926 50S ribosome-binding GTPase DS748_RS21295 PF01195 Peptidyl-tRNA hydrolase DS748_RS21300 PF10762 Protein of unknown function (DUF2583) DS748_RS21305 PF01740 STAS domain DS748_RS21305 PF00916 Sulfate permease family DS748_RS21310 PF14572 Phosphoribosyl synthetase-associated domain DS748_RS21310 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DS748_RS21315 PF08544 GHMP kinases C terminal DS748_RS21315 PF00288 GHMP kinases N terminal domain DS748_RS21320 PF03550 Outer membrane lipoprotein LolB DS748_RS21325 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DS748_RS21325 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DS748_RS21325 PF01488 Shikimate / quinate 5-dehydrogenase DS748_RS21330 PF03462 PCRF domain DS748_RS21330 PF00472 RF-1 domain DS748_RS21335 PF17827 PrmC N-terminal domain DS748_RS21335 PF13847 Methyltransferase domain DS748_RS21340 PF04247 Invasion gene expression up-regulator, SirB DS748_RS21345 PF13369 Transglutaminase-like superfamily DS748_RS21350 PF00793 DAHP synthetase I family DS748_RS21360 PF01797 Transposase IS200 like DS748_RS21395 PF03372 Endonuclease/Exonuclease/phosphatase family DS748_RS21400 PF06183 DinI-like family DS748_RS21405 PF00652 Ricin-type beta-trefoil lectin domain DS748_RS21410 PF00313 'Cold-shock' DNA-binding domain DS748_RS21425 PF06316 Enterobacterial Ail/Lom protein DS748_RS21450 PF00011 Hsp20/alpha crystallin family DS748_RS21460 PF01292 Prokaryotic cytochrome b561 DS748_RS21470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS748_RS21475 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS21480 PF12911 N-terminal TM domain of oligopeptide transport permease C DS748_RS21480 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS21485 PF00005 ABC transporter DS748_RS21490 PF00005 ABC transporter DS748_RS21495 PF00924 Mechanosensitive ion channel DS748_RS21510 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DS748_RS21515 PF01909 Nucleotidyltransferase domain DS748_RS21515 PF13427 Domain of unknown function (DUF4111) DS748_RS21525 PF09278 MerR, DNA binding DS748_RS21525 PF00376 MerR family regulatory protein DS748_RS21540 PF01817 Chorismate mutase type II DS748_RS21545 PF01810 LysE type translocator DS748_RS21555 PF09313 Domain of unknown function (DUF1971) DS748_RS21560 PF08956 Domain of unknown function (DUF1869) DS748_RS21575 PF04226 Transglycosylase associated protein DS748_RS21585 PF01797 Transposase IS200 like DS748_RS21595 PF03891 Domain of unknown function (DUF333) DS748_RS21605 PF04343 Protein of unknown function, DUF488 DS748_RS21610 PF07690 Major Facilitator Superfamily DS748_RS21615 PF02311 AraC-like ligand binding domain DS748_RS21615 PF12833 Helix-turn-helix domain DS748_RS21620 PF04284 Protein of unknown function (DUF441) DS748_RS21630 PF04073 Aminoacyl-tRNA editing domain DS748_RS21640 PF04285 Protein of unknown function (DUF444) DS748_RS21645 PF08298 PrkA AAA domain DS748_RS21645 PF06798 PrkA serine protein kinase C-terminal domain DS748_RS21650 PF06629 MltA-interacting protein MipA DS748_RS21655 PF13186 Iron-sulfur cluster-binding domain DS748_RS21655 PF04055 Radical SAM superfamily DS748_RS21660 PF00248 Aldo/keto reductase family DS748_RS21665 PF01263 Aldose 1-epimerase DS748_RS21670 PF01263 Aldose 1-epimerase DS748_RS21680 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DS748_RS21680 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DS748_RS21685 PF01641 SelR domain DS748_RS21690 PF07023 Protein of unknown function (DUF1315) DS748_RS21695 PF00857 Isochorismatase family DS748_RS21700 PF00710 Asparaginase, N-terminal DS748_RS21700 PF17763 Glutaminase/Asparaginase C-terminal domain DS748_RS21705 PF01343 Peptidase family S49 DS748_RS21710 PF00881 Nitroreductase family DS748_RS21715 PF00586 AIR synthase related protein, N-terminal domain DS748_RS21715 PF02769 AIR synthase related protein, C-terminal domain DS748_RS21720 PF01131 DNA topoisomerase DS748_RS21720 PF01751 Toprim domain DS748_RS21725 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DS748_RS21725 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DS748_RS21730 PF07383 Protein of unknown function (DUF1496) DS748_RS21735 PF00293 NUDIX domain DS748_RS21740 PF03372 Endonuclease/Exonuclease/phosphatase family DS748_RS21745 PF00202 Aminotransferase class-III DS748_RS21750 PF04958 Arginine N-succinyltransferase beta subunit DS748_RS21760 PF04996 Succinylarginine dihydrolase DS748_RS21765 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DS748_RS21775 PF07813 LTXXQ motif family protein DS748_RS21785 PF02540 NAD synthase DS748_RS21790 PF04355 SmpA / OmlA family DS748_RS21800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DS748_RS21805 PF02378 Phosphotransferase system, EIIC DS748_RS21810 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DS748_RS21815 PF12833 Helix-turn-helix domain DS748_RS21815 PF07883 Cupin domain DS748_RS21820 PF11975 Family 4 glycosyl hydrolase C-terminal domain DS748_RS21820 PF02056 Family 4 glycosyl hydrolase DS748_RS21825 PF04794 YdjC-like protein DS748_RS21835 PF01797 Transposase IS200 like DS748_RS21840 PF06628 Catalase-related immune-responsive DS748_RS21840 PF00199 Catalase DS748_RS21840 PF18011 C-terminal domain found in long catalases DS748_RS21845 PF10729 Cell division activator CedA DS748_RS21850 PF00375 Sodium:dicarboxylate symporter family DS748_RS21855 PF04307 LexA-binding, inner membrane-associated putative hydrolase DS748_RS21860 PF13419 Haloacid dehalogenase-like hydrolase DS748_RS21865 PF14002 YniB-like protein DS748_RS21870 PF03881 Fructosamine kinase DS748_RS21875 PF11080 Endoribonuclease GhoS DS748_RS21880 PF00294 pfkB family carbohydrate kinase DS748_RS21885 PF04338 Protein of unknown function, DUF481 DS748_RS21920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DS748_RS21920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DS748_RS21920 PF02824 TGS domain DS748_RS21920 PF03129 Anticodon binding domain DS748_RS21925 PF00707 Translation initiation factor IF-3, C-terminal domain DS748_RS21925 PF05198 Translation initiation factor IF-3, N-terminal domain DS748_RS21930 PF01632 Ribosomal protein L35 DS748_RS21935 PF00453 Ribosomal protein L20 DS748_RS21945 PF01409 tRNA synthetases class II core domain (F) DS748_RS21945 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DS748_RS21950 PF03483 B3/4 domain DS748_RS21950 PF03484 tRNA synthetase B5 domain DS748_RS21950 PF03147 Ferredoxin-fold anticodon binding domain DS748_RS21950 PF01588 Putative tRNA binding domain DS748_RS21950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DS748_RS21955 PF00216 Bacterial DNA-binding protein DS748_RS21960 PF01032 FecCD transport family DS748_RS21965 PF00255 Glutathione peroxidase DS748_RS21970 PF00005 ABC transporter DS748_RS21975 PF00877 NlpC/P60 family DS748_RS21980 PF00563 EAL domain DS748_RS21985 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DS748_RS21990 PF10636 Hemin uptake protein hemP DS748_RS21995 PF00793 DAHP synthetase I family DS748_RS22000 PF03618 Kinase/pyrophosphorylase DS748_RS22005 PF00391 PEP-utilising enzyme, mobile domain DS748_RS22005 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DS748_RS22005 PF02896 PEP-utilising enzyme, TIM barrel domain DS748_RS22010 PF01487 Type I 3-dehydroquinase DS748_RS22020 PF01594 AI-2E family transporter DS748_RS22025 PF13183 4Fe-4S dicluster domain DS748_RS22025 PF02913 FAD linked oxidases, C-terminal domain DS748_RS22025 PF01565 FAD binding domain DS748_RS22030 PF03061 Thioesterase superfamily DS748_RS22035 PF15930 Domain of unknown function DS748_RS22040 PF00375 Sodium:dicarboxylate symporter family DS748_RS22045 PF01521 Iron-sulphur cluster biosynthesis DS748_RS22050 PF01458 Uncharacterized protein family (UPF0051) DS748_RS22055 PF00005 ABC transporter DS748_RS22060 PF01458 Uncharacterized protein family (UPF0051) DS748_RS22065 PF00266 Aminotransferase class-V DS748_RS22070 PF02657 Fe-S metabolism associated domain DS748_RS22080 PF04728 Lipoprotein leucine-zipper DS748_RS22085 PF04728 Lipoprotein leucine-zipper DS748_RS22090 PF02887 Pyruvate kinase, alpha/beta domain DS748_RS22090 PF00224 Pyruvate kinase, barrel domain DS748_RS22095 PF00324 Amino acid permease DS748_RS22115 PF00384 Molybdopterin oxidoreductase DS748_RS22115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DS748_RS22115 PF01568 Molydopterin dinucleotide binding domain DS748_RS22120 PF03916 Polysulphide reductase, NrfD DS748_RS22125 PF13247 4Fe-4S dicluster domain DS748_RS22130 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS22130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS22135 PF00072 Response regulator receiver domain DS748_RS22135 PF00196 Bacterial regulatory proteins, luxR family DS748_RS22140 PF10965 Protein of unknown function (DUF2767) DS748_RS22145 PF08349 Protein of unknown function (DUF1722) DS748_RS22150 PF13411 MerR HTH family regulatory protein DS748_RS22155 PF00196 Bacterial regulatory proteins, luxR family DS748_RS22155 PF00072 Response regulator receiver domain DS748_RS22160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS22160 PF01627 Hpt domain DS748_RS22160 PF00072 Response regulator receiver domain DS748_RS22160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DS748_RS22160 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS22160 PF00672 HAMP domain DS748_RS22170 PF03958 Bacterial type II/III secretion system short domain DS748_RS22170 PF00263 Bacterial type II and III secretion system protein DS748_RS22190 PF03433 EspA-like secreted protein DS748_RS22200 PF04888 Secretion system effector C (SseC) like family DS748_RS22205 PF05802 Enterobacterial EspB protein DS748_RS22245 PF01514 Secretory protein of YscJ/FliF family DS748_RS22260 PF07201 HrpJ-like domain DS748_RS22270 PF00771 FHIPEP family DS748_RS22275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DS748_RS22275 PF18269 T3SS EscN ATPase C-terminal domain DS748_RS22290 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DS748_RS22295 PF00813 FliP family DS748_RS22300 PF01313 Bacterial export proteins, family 3 DS748_RS22305 PF01311 Bacterial export proteins, family 1 DS748_RS22310 PF01312 FlhB HrpN YscU SpaS Family DS748_RS22325 PF01554 MatE DS748_RS22330 PF00677 Lumazine binding domain DS748_RS22340 PF07690 Major Facilitator Superfamily DS748_RS22345 PF03466 LysR substrate binding domain DS748_RS22345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS22350 PF00356 Bacterial regulatory proteins, lacI family DS748_RS22360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DS748_RS22360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DS748_RS22365 PF00877 NlpC/P60 family DS748_RS22370 PF00462 Glutaredoxin DS748_RS22380 PF00929 Exonuclease DS748_RS22385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DS748_RS22390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DS748_RS22395 PF00440 Bacterial regulatory proteins, tetR family DS748_RS22395 PF16925 Tetracyclin repressor-like, C-terminal domain DS748_RS22400 PF06945 Protein of unknown function (DUF1289) DS748_RS22405 PF00248 Aldo/keto reductase family DS748_RS22410 PF00080 Copper/zinc superoxide dismutase (SODC) DS748_RS22415 PF04632 Fusaric acid resistance protein family DS748_RS22420 PF00529 HlyD membrane-fusion protein of T1SS DS748_RS22420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS748_RS22425 PF07869 Protein of unknown function (DUF1656) DS748_RS22430 PF01047 MarR family DS748_RS22435 PF05433 Glycine zipper 2TM domain DS748_RS22440 PF03702 Anhydro-N-acetylmuramic acid kinase DS748_RS22450 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DS748_RS22450 PF01243 Pyridoxamine 5'-phosphate oxidase DS748_RS22455 PF00579 tRNA synthetases class I (W and Y) DS748_RS22455 PF01479 S4 domain DS748_RS22465 PF00043 Glutathione S-transferase, C-terminal domain DS748_RS22465 PF02798 Glutathione S-transferase, N-terminal domain DS748_RS22470 PF00854 POT family DS748_RS22475 PF00633 Helix-hairpin-helix motif DS748_RS22475 PF10576 Iron-sulfur binding domain of endonuclease III DS748_RS22475 PF00730 HhH-GPD superfamily base excision DNA repair protein DS748_RS22480 PF02508 Rnf-Nqr subunit, membrane protein DS748_RS22485 PF04205 FMN-binding domain DS748_RS22490 PF03116 NQR2, RnfD, RnfE family DS748_RS22495 PF13375 RnfC Barrel sandwich hybrid domain DS748_RS22495 PF12838 4Fe-4S dicluster domain DS748_RS22495 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DS748_RS22495 PF10531 SLBB domain DS748_RS22500 PF04060 Putative Fe-S cluster DS748_RS22505 PF02508 Rnf-Nqr subunit, membrane protein DS748_RS22510 PF10754 Protein of unknown function (DUF2569) DS748_RS22515 PF05321 Haemolysin expression modulating protein DS748_RS22525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DS748_RS22525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DS748_RS22530 PF00962 Adenosine/AMP deaminase DS748_RS22540 PF00367 phosphotransferase system, EIIB DS748_RS22540 PF02378 Phosphotransferase system, EIIC DS748_RS22545 PF06097 Bacterial protein of unknown function (DUF945) DS748_RS22550 PF01238 Phosphomannose isomerase type I DS748_RS22555 PF05683 Fumarase C-terminus DS748_RS22555 PF05681 Fumarate hydratase (Fumerase) DS748_RS22560 PF00206 Lyase DS748_RS22560 PF10415 Fumarase C C-terminus DS748_RS22565 PF05472 DNA replication terminus site-binding protein (Ter protein) DS748_RS22570 PF00672 HAMP domain DS748_RS22570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS748_RS22570 PF00512 His Kinase A (phospho-acceptor) domain DS748_RS22575 PF01979 Amidohydrolase family DS748_RS22575 PF13382 Adenine deaminase C-terminal domain DS748_RS22580 PF00267 Gram-negative porin DS748_RS22590 PF00072 Response regulator receiver domain DS748_RS22590 PF00486 Transcriptional regulatory protein, C terminal DS748_RS22595 PF06942 GlpM protein DS748_RS22600 PF13520 Amino acid permease DS748_RS22605 PF02796 Helix-turn-helix domain of resolvase DS748_RS22605 PF00239 Resolvase, N terminal domain DS748_RS22620 PF07484 Phage Tail Collar Domain DS748_RS22625 PF07484 Phage Tail Collar Domain DS748_RS22630 PF07484 Phage Tail Collar Domain DS748_RS22635 PF02413 Caudovirales tail fibre assembly protein, lambda gpK DS748_RS22750 PF04233 Phage Mu protein F like protein DS748_RS22760 PF03237 Terminase-like family DS748_RS22810 PF01471 Putative peptidoglycan binding domain DS748_RS22810 PF13401 AAA domain DS748_RS22820 PF07352 Bacteriophage Mu Gam like protein DS748_RS22865 PF06252 Protein of unknown function (DUF1018) DS748_RS22870 PF08765 Mor transcription activator family DS748_RS22875 PF07338 Protein of unknown function (DUF1471) DS748_RS22880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DS748_RS22880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DS748_RS22880 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DS748_RS22885 PF02233 NAD(P) transhydrogenase beta subunit DS748_RS22890 PF01594 AI-2E family transporter DS748_RS22900 PF00893 Small Multidrug Resistance protein DS748_RS22905 PF00893 Small Multidrug Resistance protein DS748_RS22910 PF00089 Trypsin DS748_RS22925 PF01797 Transposase IS200 like DS748_RS22930 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DS748_RS22930 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DS748_RS22930 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DS748_RS22930 PF10371 Domain of unknown function DS748_RS22930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS748_RS22940 PF03891 Domain of unknown function (DUF333) DS748_RS22945 PF03724 META domain DS748_RS22950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS748_RS22950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DS748_RS22955 PF11739 Dicarboxylate transport DS748_RS22960 PF13617 YnbE-like lipoprotein DS748_RS22965 PF07027 Protein of unknown function (DUF1318) DS748_RS22975 PF02525 Flavodoxin-like fold DS748_RS22980 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DS748_RS22980 PF00271 Helicase conserved C-terminal domain DS748_RS22980 PF04408 Helicase associated domain (HA2) DS748_RS22980 PF11898 Domain of unknown function (DUF3418) DS748_RS22980 PF00270 DEAD/DEAH box helicase DS748_RS22985 PF02698 DUF218 domain DS748_RS22995 PF08242 Methyltransferase domain DS748_RS23005 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS23010 PF00005 ABC transporter DS748_RS23015 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS23020 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS748_RS23040 PF00135 Carboxylesterase family DS748_RS23045 PF04349 Periplasmic glucan biosynthesis protein, MdoG DS748_RS23050 PF04264 YceI-like domain DS748_RS23055 PF01070 FMN-dependent dehydrogenase DS748_RS23060 PF00583 Acetyltransferase (GNAT) family DS748_RS23065 PF08220 DeoR-like helix-turn-helix domain DS748_RS23065 PF00455 DeoR C terminal sensor domain DS748_RS23070 PF00834 Ribulose-phosphate 3 epimerase family DS748_RS23075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS748_RS23080 PF03437 BtpA family DS748_RS23085 PF03611 PTS system sugar-specific permease component DS748_RS23090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DS748_RS23095 PF05343 M42 glutamyl aminopeptidase DS748_RS23100 PF13302 Acetyltransferase (GNAT) domain DS748_RS23105 PF18836 Beta solenoid repeat from YDCK DS748_RS23110 PF03595 Voltage-dependent anion channel DS748_RS23115 PF03848 Tellurite resistance protein TehB DS748_RS23120 PF11769 Protein of unknown function (DUF3313) DS748_RS23125 PF03594 Benzoate membrane transport protein DS748_RS23130 PF07883 Cupin domain DS748_RS23130 PF01381 Helix-turn-helix DS748_RS23135 PF12392 Collagenase DS748_RS23135 PF01136 Peptidase family U32 DS748_RS23140 PF10829 Protein of unknown function (DUF2554) DS748_RS23145 PF06767 Sif protein DS748_RS23160 PF01427 D-ala-D-ala dipeptidase DS748_RS23165 PF00155 Aminotransferase class I and II DS748_RS23165 PF00392 Bacterial regulatory proteins, gntR family DS748_RS23170 PF00171 Aldehyde dehydrogenase family DS748_RS23180 PF10753 Toxin GhoT_OrtT DS748_RS23200 PF10735 Protein of unknown function (DUF2526) DS748_RS23205 PF04657 Putative inner membrane exporter, YdcZ DS748_RS23215 PF00107 Zinc-binding dehydrogenase DS748_RS23215 PF16884 N-terminal domain of oxidoreductase DS748_RS23220 PF00392 Bacterial regulatory proteins, gntR family DS748_RS23220 PF07729 FCD domain DS748_RS23225 PF00593 TonB dependent receptor DS748_RS23225 PF07715 TonB-dependent Receptor Plug Domain DS748_RS23235 PF06004 Bacterial protein of unknown function (DUF903) DS748_RS23240 PF00324 Amino acid permease DS748_RS23255 PF00797 N-acetyltransferase DS748_RS23260 PF02567 Phenazine biosynthesis-like protein DS748_RS23265 PF02665 Nitrate reductase gamma subunit DS748_RS23270 PF02613 Nitrate reductase delta subunit DS748_RS23275 PF14711 Respiratory nitrate reductase beta C-terminal DS748_RS23275 PF13247 4Fe-4S dicluster domain DS748_RS23280 PF01568 Molydopterin dinucleotide binding domain DS748_RS23280 PF00384 Molybdopterin oxidoreductase DS748_RS23280 PF14710 Respiratory nitrate reductase alpha N-terminal DS748_RS23285 PF07690 Major Facilitator Superfamily DS748_RS23290 PF00440 Bacterial regulatory proteins, tetR family DS748_RS23295 PF07690 Major Facilitator Superfamily DS748_RS23310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DS748_RS23310 PF00384 Molybdopterin oxidoreductase DS748_RS23310 PF01568 Molydopterin dinucleotide binding domain DS748_RS23315 PF08240 Alcohol dehydrogenase GroES-like domain DS748_RS23315 PF00107 Zinc-binding dehydrogenase DS748_RS23320 PF00390 Malic enzyme, N-terminal domain DS748_RS23320 PF03949 Malic enzyme, NAD binding domain DS748_RS23325 PF08136 30S ribosomal protein subunit S22 family DS748_RS23330 PF10684 Putative biofilm-dependent modulation protein DS748_RS23335 PF02566 OsmC-like protein DS748_RS23340 PF06109 Haemolysin E (HlyE) DS748_RS23355 PF06411 HdeA/HdeB family DS748_RS23365 PF11941 Domain of unknown function (DUF3459) DS748_RS23365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DS748_RS23365 PF00128 Alpha amylase, catalytic domain DS748_RS23370 PF00128 Alpha amylase, catalytic domain DS748_RS23380 PF00155 Aminotransferase class I and II DS748_RS23410 PF05707 Zonular occludens toxin (Zot) DS748_RS23475 PF05707 Zonular occludens toxin (Zot) DS748_RS23535 PF01042 Endoribonuclease L-PSP DS748_RS23540 PF02547 Queuosine biosynthesis protein DS748_RS23555 PF07690 Major Facilitator Superfamily DS748_RS23565 PF07690 Major Facilitator Superfamily DS748_RS23570 PF00107 Zinc-binding dehydrogenase DS748_RS23570 PF08240 Alcohol dehydrogenase GroES-like domain DS748_RS23575 PF00392 Bacterial regulatory proteins, gntR family DS748_RS23575 PF07729 FCD domain DS748_RS23585 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DS748_RS23585 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DS748_RS23595 PF01292 Prokaryotic cytochrome b561 DS748_RS23600 PF01750 Hydrogenase maturation protease DS748_RS23605 PF01455 HupF/HypC family DS748_RS23615 PF04809 HupH hydrogenase expression protein, C-terminal conserved region DS748_RS23635 PF01062 Bestrophin, RFP-TM, chloride channel DS748_RS23640 PF13811 Domain of unknown function (DUF4186) DS748_RS23645 PF04960 Glutaminase DS748_RS23650 PF00171 Aldehyde dehydrogenase family DS748_RS23655 PF03466 LysR substrate binding domain DS748_RS23655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS23665 PF07690 Major Facilitator Superfamily DS748_RS23670 PF01914 MarC family integral membrane protein DS748_RS23675 PF01047 MarR family DS748_RS23680 PF12833 Helix-turn-helix domain DS748_RS23685 PF13999 MarB protein DS748_RS23690 PF00892 EamA-like transporter family DS748_RS23695 PF07690 Major Facilitator Superfamily DS748_RS23710 PF02464 Competence-damaged protein DS748_RS23715 PF10685 Stress-induced bacterial acidophilic repeat motif DS748_RS23725 PF01432 Peptidase family M3 DS748_RS23730 PF00106 short chain dehydrogenase DS748_RS23735 PF07729 FCD domain DS748_RS23735 PF00392 Bacterial regulatory proteins, gntR family DS748_RS23740 PF14001 YdfZ protein DS748_RS23750 PF07690 Major Facilitator Superfamily DS748_RS23750 PF00083 Sugar (and other) transporter DS748_RS23755 PF00107 Zinc-binding dehydrogenase DS748_RS23755 PF08240 Alcohol dehydrogenase GroES-like domain DS748_RS23760 PF13378 Enolase C-terminal domain-like DS748_RS23760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS748_RS23765 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DS748_RS23770 PF06932 Protein of unknown function (DUF1283) DS748_RS23775 PF13302 Acetyltransferase (GNAT) domain DS748_RS23780 PF06788 Uncharacterised protein family (UPF0257) DS748_RS23790 PF01568 Molydopterin dinucleotide binding domain DS748_RS23790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DS748_RS23790 PF00384 Molybdopterin oxidoreductase DS748_RS23795 PF01568 Molydopterin dinucleotide binding domain DS748_RS23795 PF00384 Molybdopterin oxidoreductase DS748_RS23795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DS748_RS23800 PF13247 4Fe-4S dicluster domain DS748_RS23800 PF12800 4Fe-4S binding domain DS748_RS23805 PF04976 DMSO reductase anchor subunit (DmsC) DS748_RS23810 PF02613 Nitrate reductase delta subunit DS748_RS23815 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS23820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DS748_RS23825 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS23830 PF00571 CBS domain DS748_RS23830 PF00005 ABC transporter DS748_RS23835 PF00654 Voltage gated chloride channel DS748_RS23845 PF00480 ROK family DS748_RS23850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS23850 PF03466 LysR substrate binding domain DS748_RS23855 PF07690 Major Facilitator Superfamily DS748_RS23860 PF01797 Transposase IS200 like DS748_RS23870 PF00582 Universal stress protein family DS748_RS23875 PF00893 Small Multidrug Resistance protein DS748_RS23885 PF12167 Arm DNA-binding domain DS748_RS23885 PF00589 Phage integrase family DS748_RS23890 PF01171 PP-loop family DS748_RS23910 PF01544 CorA-like Mg2+ transporter protein DS748_RS23915 PF00672 HAMP domain DS748_RS23915 PF02203 Tar ligand binding domain homologue DS748_RS23915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS748_RS23925 PF01713 Smr domain DS748_RS23930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DS748_RS23930 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DS748_RS23935 PF00027 Cyclic nucleotide-binding domain DS748_RS23935 PF13545 Crp-like helix-turn-helix domain DS748_RS23940 PF00582 Universal stress protein family DS748_RS23945 PF10749 Protein of unknown function (DUF2534) DS748_RS23950 PF00924 Mechanosensitive ion channel DS748_RS23970 PF08534 Redoxin DS748_RS23990 PF12833 Helix-turn-helix domain DS748_RS23990 PF06445 GyrI-like small molecule binding domain DS748_RS24005 PF00440 Bacterial regulatory proteins, tetR family DS748_RS24015 PF00248 Aldo/keto reductase family DS748_RS24020 PF03466 LysR substrate binding domain DS748_RS24020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS24030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS748_RS24035 PF00246 Zinc carboxypeptidase DS748_RS24040 PF13378 Enolase C-terminal domain-like DS748_RS24040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS748_RS24045 PF08534 Redoxin DS748_RS24060 PF18024 Helix-turn-helix domain DS748_RS24060 PF00158 Sigma-54 interaction domain DS748_RS24065 PF05128 Domain of unknown function (DUF697) DS748_RS24070 PF04317 YcjX-like family, DUF463 DS748_RS24075 PF00581 Rhodanese-like domain DS748_RS24080 PF09584 Phage shock protein PspD (Phageshock_PspD) DS748_RS24085 PF04024 PspC domain DS748_RS24090 PF06667 Phage shock protein B DS748_RS24095 PF04012 PspA/IM30 family DS748_RS24100 PF00158 Sigma-54 interaction domain DS748_RS24100 PF02954 Bacterial regulatory protein, Fis family DS748_RS24105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS748_RS24110 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS24160 PF12911 N-terminal TM domain of oligopeptide transport permease C DS748_RS24160 PF00528 Binding-protein-dependent transport system inner membrane component DS748_RS24165 PF00005 ABC transporter DS748_RS24165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DS748_RS24170 PF00005 ABC transporter DS748_RS24210 PF00773 RNB domain DS748_RS24210 PF08206 Ribonuclease B OB domain DS748_RS24210 PF17876 Cold shock domain DS748_RS24210 PF00575 S1 RNA binding domain DS748_RS24215 PF00563 EAL domain DS748_RS24215 PF13426 PAS domain DS748_RS24215 PF00990 Diguanylate cyclase, GGDEF domain DS748_RS24225 PF00455 DeoR C terminal sensor domain DS748_RS24225 PF08220 DeoR-like helix-turn-helix domain DS748_RS24230 PF05433 Glycine zipper 2TM domain DS748_RS24235 PF01253 Translation initiation factor SUI1 DS748_RS24240 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DS748_RS24245 PF18073 Rubredoxin metal binding domain DS748_RS24250 PF06305 Lipopolysaccharide assembly protein A domain DS748_RS24255 PF01569 PAP2 superfamily DS748_RS24260 PF00925 GTP cyclohydrolase II DS748_RS24265 PF00694 Aconitase C-terminal domain DS748_RS24265 PF00330 Aconitase family (aconitate hydratase) DS748_RS24280 PF03466 LysR substrate binding domain DS748_RS24280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS748_RS24285 PF01751 Toprim domain DS748_RS24285 PF08272 Topoisomerase I zinc-ribbon-like DS748_RS24285 PF01396 Topoisomerase DNA binding C4 zinc finger DS748_RS24285 PF01131 DNA topoisomerase DS748_RS24290 PF10692 Protein of unknown function (DUF2498) DS748_RS24295 PF08496 Peptidase family S49 N-terminal DS748_RS24295 PF01343 Peptidase family S49 DS748_RS24300 PF00106 short chain dehydrogenase DS748_RS24305 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DS748_RS24310 PF00849 RNA pseudouridylate synthase DS748_RS24310 PF01479 S4 domain DS748_RS24315 PF01300 Telomere recombination DS748_RS24320 PF02811 PHP domain DS748_RS24325 PF08255 Trp-operon Leader Peptide DS748_RS24330 PF00425 chorismate binding enzyme DS748_RS24330 PF04715 Anthranilate synthase component I, N terminal region DS748_RS24335 PF00591 Glycosyl transferase family, a/b domain DS748_RS24335 PF02885 Glycosyl transferase family, helical bundle domain DS748_RS24335 PF00117 Glutamine amidotransferase class-I DS748_RS24345 PF00291 Pyridoxal-phosphate dependent enzyme DS748_RS24350 PF00290 Tryptophan synthase alpha chain DS748_RS24355 PF10685 Stress-induced bacterial acidophilic repeat motif DS748_RS24360 PF05974 Domain of unknown function (DUF892) DS748_RS24365 PF05974 Domain of unknown function (DUF892) DS748_RS24370 PF05067 Manganese containing catalase DS748_RS24375 PF03922 OmpW family DS748_RS24380 PF03692 Putative zinc- or iron-chelating domain DS748_RS24390 PF04279 Intracellular septation protein A DS748_RS24395 PF03061 Thioesterase superfamily DS748_RS24400 PF03544 Gram-negative bacterial TonB protein C-terminal DS748_RS24405 PF03795 YCII-related domain