locus-tag class description CJP42_RS00010 PF07690 Major Facilitator Superfamily CJP42_RS00015 PF00294 pfkB family carbohydrate kinase CJP42_RS00020 PF08220 DeoR-like helix-turn-helix domain CJP42_RS00020 PF00455 DeoR C terminal sensor domain CJP42_RS00025 PF01842 ACT domain CJP42_RS00030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJP42_RS00030 PF00205 Thiamine pyrophosphate enzyme, central domain CJP42_RS00030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJP42_RS00035 PF08049 IlvB leader peptide CJP42_RS00045 PF13939 Toxin TisB, type I toxin-antitoxin system CJP42_RS00055 PF07690 Major Facilitator Superfamily CJP42_RS00065 PF03466 LysR substrate binding domain CJP42_RS00065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS00070 PF02447 GntP family permease CJP42_RS00075 PF00291 Pyridoxal-phosphate dependent enzyme CJP42_RS00085 PF02656 Domain of unknown function (DUF202) CJP42_RS00095 PF06826 Predicted Permease Membrane Region CJP42_RS00095 PF02080 TrkA-C domain CJP42_RS00100 PF00011 Hsp20/alpha crystallin family CJP42_RS00105 PF00011 Hsp20/alpha crystallin family CJP42_RS00110 PF07119 Protein of unknown function (DUF1375) CJP42_RS00115 PF12566 Protein of unknown function (DUF3748) CJP42_RS00115 PF07676 WD40-like Beta Propeller Repeat CJP42_RS00120 PF03918 Cytochrome C biogenesis protein CJP42_RS00125 PF08534 Redoxin CJP42_RS00130 PF01578 Cytochrome C assembly protein CJP42_RS00130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CJP42_RS00135 PF03100 CcmE CJP42_RS00140 PF04995 Heme exporter protein D (CcmD) CJP42_RS00145 PF01578 Cytochrome C assembly protein CJP42_RS00150 PF03379 CcmB protein CJP42_RS00155 PF00005 ABC transporter CJP42_RS00160 PF14376 Haem-binding domain CJP42_RS00160 PF03150 Di-haem cytochrome c peroxidase CJP42_RS00160 PF00034 Cytochrome c CJP42_RS00165 PF02613 Nitrate reductase delta subunit CJP42_RS00170 PF18364 Molybdopterin oxidoreductase N-terminal domain CJP42_RS00170 PF01568 Molydopterin dinucleotide binding domain CJP42_RS00170 PF00384 Molybdopterin oxidoreductase CJP42_RS00175 PF03264 NapC/NirT cytochrome c family, N-terminal region CJP42_RS00185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJP42_RS00190 PF00072 Response regulator receiver domain CJP42_RS00190 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS00190 PF00672 HAMP domain CJP42_RS00190 PF01627 Hpt domain CJP42_RS00215 PF07690 Major Facilitator Superfamily CJP42_RS00220 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJP42_RS00220 PF13378 Enolase C-terminal domain-like CJP42_RS00225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS00225 PF03466 LysR substrate binding domain CJP42_RS00230 PF00986 DNA gyrase B subunit, carboxyl terminus CJP42_RS00230 PF00204 DNA gyrase B CJP42_RS00230 PF01751 Toprim domain CJP42_RS00230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS00230 PF18053 DNA gyrase B subunit insert domain CJP42_RS00240 PF02767 DNA polymerase III beta subunit, central domain CJP42_RS00240 PF00712 DNA polymerase III beta subunit, N-terminal domain CJP42_RS00240 PF02768 DNA polymerase III beta subunit, C-terminal domain CJP42_RS00245 PF11638 DnaA N-terminal domain CJP42_RS00245 PF08299 Bacterial dnaA protein helix-turn-helix CJP42_RS00245 PF00308 Bacterial dnaA protein CJP42_RS00250 PF00468 Ribosomal protein L34 CJP42_RS00255 PF00825 Ribonuclease P CJP42_RS00260 PF01809 Putative membrane protein insertion efficiency factor CJP42_RS00265 PF02096 60Kd inner membrane protein CJP42_RS00265 PF14849 YidC periplasmic domain CJP42_RS00270 PF12631 MnmE helical domain CJP42_RS00270 PF01926 50S ribosome-binding GTPase CJP42_RS00270 PF10396 GTP-binding protein TrmE N-terminus CJP42_RS00275 PF07690 Major Facilitator Superfamily CJP42_RS00280 PF03466 LysR substrate binding domain CJP42_RS00280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS00290 PF03358 NADPH-dependent FMN reductase CJP42_RS00295 PF00860 Permease family CJP42_RS00300 PF13419 Haloacid dehalogenase-like hydrolase CJP42_RS00305 PF01895 PhoU domain CJP42_RS00310 PF00005 ABC transporter CJP42_RS00315 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS00320 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS00325 PF12849 PBP superfamily domain CJP42_RS00330 PF02378 Phosphotransferase system, EIIC CJP42_RS00330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJP42_RS00335 PF08501 Shikimate dehydrogenase substrate binding domain CJP42_RS00345 PF00419 Fimbrial protein CJP42_RS00355 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS00355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS00360 PF00419 Fimbrial protein CJP42_RS00365 PF01380 SIS domain CJP42_RS00370 PF00132 Bacterial transferase hexapeptide (six repeats) CJP42_RS00370 PF12804 MobA-like NTP transferase domain CJP42_RS00385 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CJP42_RS00385 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJP42_RS00390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJP42_RS00390 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJP42_RS00395 PF00231 ATP synthase CJP42_RS00400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJP42_RS00400 PF00306 ATP synthase alpha/beta chain, C terminal domain CJP42_RS00400 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJP42_RS00405 PF00213 ATP synthase delta (OSCP) subunit CJP42_RS00410 PF00430 ATP synthase B/B' CF(0) CJP42_RS00415 PF00137 ATP synthase subunit C CJP42_RS00420 PF00119 ATP synthase A chain CJP42_RS00425 PF03899 ATP synthase I chain CJP42_RS00430 PF02527 rRNA small subunit methyltransferase G CJP42_RS00435 PF13932 GidA associated domain CJP42_RS00435 PF01134 Glucose inhibited division protein A CJP42_RS00445 PF00258 Flavodoxin CJP42_RS00450 PF01037 Lrp/AsnC ligand binding domain CJP42_RS00460 PF05762 VWA domain containing CoxE-like protein CJP42_RS00465 PF07728 AAA domain (dynein-related subfamily) CJP42_RS00465 PF12592 Protein of unknown function (DUF3763) CJP42_RS00465 PF17868 AAA lid domain CJP42_RS00470 PF02705 K+ potassium transporter CJP42_RS00475 PF05025 RbsD / FucU transport protein family CJP42_RS00480 PF00005 ABC transporter CJP42_RS00485 PF02653 Branched-chain amino acid transport system / permease component CJP42_RS00490 PF13407 Periplasmic binding protein domain CJP42_RS00495 PF00294 pfkB family carbohydrate kinase CJP42_RS00500 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS00510 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS00510 PF07729 FCD domain CJP42_RS00540 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CJP42_RS00545 PF12804 MobA-like NTP transferase domain CJP42_RS00550 PF06288 Protein of unknown function (DUF1040) CJP42_RS00555 PF01636 Phosphotransferase enzyme family CJP42_RS00560 PF01323 DSBA-like thioredoxin domain CJP42_RS00565 PF01553 Acyltransferase CJP42_RS00575 PF01612 3'-5' exonuclease CJP42_RS00575 PF00476 DNA polymerase family A CJP42_RS00575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJP42_RS00575 PF01367 5'-3' exonuclease, C-terminal SAM fold CJP42_RS00585 PF01926 50S ribosome-binding GTPase CJP42_RS00595 PF04220 Der GTPase activator (YihI) CJP42_RS00600 PF06969 HemN C-terminal domain CJP42_RS00600 PF04055 Radical SAM superfamily CJP42_RS00610 PF02954 Bacterial regulatory protein, Fis family CJP42_RS00610 PF00072 Response regulator receiver domain CJP42_RS00610 PF00158 Sigma-54 interaction domain CJP42_RS00615 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS00615 PF00989 PAS fold CJP42_RS00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS00625 PF03951 Glutamine synthetase, beta-Grasp domain CJP42_RS00625 PF00120 Glutamine synthetase, catalytic domain CJP42_RS00635 PF00009 Elongation factor Tu GTP binding domain CJP42_RS00635 PF03144 Elongation factor Tu domain 2 CJP42_RS00635 PF00679 Elongation factor G C-terminus CJP42_RS00675 PF06178 Oligogalacturonate-specific porin protein (KdgM) CJP42_RS00690 PF01055 Glycosyl hydrolases family 31 CJP42_RS00705 PF01791 DeoC/LacD family aldolase CJP42_RS00710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJP42_RS00710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJP42_RS00715 PF00294 pfkB family carbohydrate kinase CJP42_RS00720 PF08220 DeoR-like helix-turn-helix domain CJP42_RS00720 PF00455 DeoR C terminal sensor domain CJP42_RS00725 PF13419 Haloacid dehalogenase-like hydrolase CJP42_RS00730 PF03631 Virulence factor BrkB CJP42_RS00735 PF02580 D-Tyr-tRNA(Tyr) deacylase CJP42_RS00740 PF00583 Acetyltransferase (GNAT) family CJP42_RS00740 PF09500 Putative thioesterase (yiiD_Cterm) CJP42_RS00745 PF01381 Helix-turn-helix CJP42_RS00750 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CJP42_RS00755 PF07859 alpha/beta hydrolase fold CJP42_RS00770 PF04216 Protein involved in formate dehydrogenase formation CJP42_RS00775 PF01292 Prokaryotic cytochrome b561 CJP42_RS00780 PF13247 4Fe-4S dicluster domain CJP42_RS00780 PF09163 Formate dehydrogenase N, transmembrane CJP42_RS00790 PF02634 FdhD/NarQ family CJP42_RS00795 PF12889 Protein of unknown function (DUF3829) CJP42_RS00800 PF12889 Protein of unknown function (DUF3829) CJP42_RS00810 PF03591 AzlC protein CJP42_RS00820 PF05336 L-rhamnose mutarotase CJP42_RS00825 PF00465 Iron-containing alcohol dehydrogenase CJP42_RS00835 PF06134 L-rhamnose isomerase (RhaA) CJP42_RS00840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJP42_RS00840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJP42_RS00845 PF02311 AraC-like ligand binding domain CJP42_RS00845 PF12833 Helix-turn-helix domain CJP42_RS00850 PF02311 AraC-like ligand binding domain CJP42_RS00850 PF12833 Helix-turn-helix domain CJP42_RS00855 PF06379 L-rhamnose-proton symport protein (RhaT) CJP42_RS00860 PF06178 Oligogalacturonate-specific porin protein (KdgM) CJP42_RS00865 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CJP42_RS00870 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CJP42_RS00880 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJP42_RS00880 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJP42_RS00885 PF03475 3-alpha domain CJP42_RS00885 PF03473 MOSC domain CJP42_RS00895 PF16527 Two-component sensor protein CpxA, periplasmic domain CJP42_RS00895 PF00672 HAMP domain CJP42_RS00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS00895 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS00900 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS00900 PF00072 Response regulator receiver domain CJP42_RS00905 PF07813 LTXXQ motif family protein CJP42_RS00910 PF01545 Cation efflux family CJP42_RS00910 PF16916 Dimerisation domain of Zinc Transporter CJP42_RS00915 PF00365 Phosphofructokinase CJP42_RS00925 PF02611 CDP-diacylglycerol pyrophosphatase CJP42_RS00935 PF00294 pfkB family carbohydrate kinase CJP42_RS00945 PF00155 Aminotransferase class I and II CJP42_RS00945 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS00955 PF02611 CDP-diacylglycerol pyrophosphatase CJP42_RS00965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJP42_RS00965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJP42_RS00970 PF04198 Putative sugar-binding domain CJP42_RS00975 PF00005 ABC transporter CJP42_RS00980 PF02653 Branched-chain amino acid transport system / permease component CJP42_RS00985 PF02653 Branched-chain amino acid transport system / permease component CJP42_RS00990 PF13407 Periplasmic binding protein domain CJP42_RS00995 PF01791 DeoC/LacD family aldolase CJP42_RS01000 PF03992 Antibiotic biosynthesis monooxygenase CJP42_RS01005 PF00834 Ribulose-phosphate 3 epimerase family CJP42_RS01010 PF00121 Triosephosphate isomerase CJP42_RS01015 PF07305 Protein of unknown function (DUF1454) CJP42_RS01020 PF05656 Protein of unknown function (DUF805) CJP42_RS01025 PF00970 Oxidoreductase FAD-binding domain CJP42_RS01025 PF00175 Oxidoreductase NAD-binding domain CJP42_RS01030 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CJP42_RS01035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJP42_RS01035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJP42_RS01040 PF00230 Major intrinsic protein CJP42_RS01045 PF06005 Cell division protein ZapB CJP42_RS01055 PF03737 Aldolase/RraA CJP42_RS01060 PF01040 UbiA prenyltransferase family CJP42_RS01065 PF10431 C-terminal, D2-small domain, of ClpB protein CJP42_RS01065 PF07724 AAA domain (Cdc48 subfamily) CJP42_RS01065 PF00004 ATPase family associated with various cellular activities (AAA) CJP42_RS01070 PF00227 Proteasome subunit CJP42_RS01080 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS01085 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CJP42_RS01085 PF18074 Primosomal protein N C-terminal domain CJP42_RS01085 PF00271 Helicase conserved C-terminal domain CJP42_RS01085 PF00270 DEAD/DEAH box helicase CJP42_RS01085 PF17764 3′ DNA-binding domain (3′BD) CJP42_RS01090 PF01197 Ribosomal protein L31 CJP42_RS01105 PF01340 Met Apo-repressor, MetJ CJP42_RS01110 PF01053 Cys/Met metabolism PLP-dependent enzyme CJP42_RS01115 PF03447 Homoserine dehydrogenase, NAD binding domain CJP42_RS01115 PF00696 Amino acid kinase family CJP42_RS01115 PF00742 Homoserine dehydrogenase CJP42_RS01135 PF02872 5'-nucleotidase, C-terminal domain CJP42_RS01135 PF17936 Bacterial Ig domain CJP42_RS01135 PF00149 Calcineurin-like phosphoesterase CJP42_RS01140 PF00464 Serine hydroxymethyltransferase CJP42_RS01145 PF01168 Alanine racemase, N-terminal domain CJP42_RS01145 PF00842 Alanine racemase, C-terminal domain CJP42_RS01150 PF00155 Aminotransferase class I and II CJP42_RS01150 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS01160 PF02219 Methylenetetrahydrofolate reductase CJP42_RS01165 PF00141 Peroxidase CJP42_RS01170 PF00465 Iron-containing alcohol dehydrogenase CJP42_RS01175 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJP42_RS01180 PF12833 Helix-turn-helix domain CJP42_RS01185 PF00884 Sulfatase CJP42_RS01190 PF00311 Phosphoenolpyruvate carboxylase CJP42_RS01200 PF07687 Peptidase dimerisation domain CJP42_RS01200 PF01546 Peptidase family M20/M25/M40 CJP42_RS01205 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJP42_RS01205 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJP42_RS01210 PF00696 Amino acid kinase family CJP42_RS01215 PF14698 Argininosuccinate lyase C-terminal CJP42_RS01215 PF00206 Lyase CJP42_RS01225 PF03466 LysR substrate binding domain CJP42_RS01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS01230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJP42_RS01230 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS01240 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS01245 PF07226 Protein of unknown function (DUF1422) CJP42_RS01250 PF05958 tRNA (Uracil-5-)-methyltransferase CJP42_RS01255 PF07715 TonB-dependent Receptor Plug Domain CJP42_RS01255 PF00593 TonB dependent receptor CJP42_RS01260 PF01177 Asp/Glu/Hydantoin racemase CJP42_RS01290 PF01565 FAD binding domain CJP42_RS01290 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJP42_RS01295 PF08279 HTH domain CJP42_RS01295 PF02237 Biotin protein ligase C terminal domain CJP42_RS01295 PF03099 Biotin/lipoate A/B protein ligase family CJP42_RS01300 PF00485 Phosphoribulokinase / Uridine kinase family CJP42_RS01335 PF00009 Elongation factor Tu GTP binding domain CJP42_RS01335 PF03144 Elongation factor Tu domain 2 CJP42_RS01335 PF03143 Elongation factor Tu C-terminal domain CJP42_RS01340 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CJP42_RS01345 PF02357 Transcription termination factor nusG CJP42_RS01345 PF00467 KOW motif CJP42_RS01350 PF00298 Ribosomal protein L11, RNA binding domain CJP42_RS01350 PF03946 Ribosomal protein L11, N-terminal domain CJP42_RS01355 PF00687 Ribosomal protein L1p/L10e family CJP42_RS01365 PF00466 Ribosomal protein L10 CJP42_RS01370 PF16320 Ribosomal protein L7/L12 dimerisation domain CJP42_RS01370 PF00542 Ribosomal protein L7/L12 C-terminal domain CJP42_RS01375 PF10385 RNA polymerase beta subunit external 1 domain CJP42_RS01375 PF04560 RNA polymerase Rpb2, domain 7 CJP42_RS01375 PF04565 RNA polymerase Rpb2, domain 3 CJP42_RS01375 PF00562 RNA polymerase Rpb2, domain 6 CJP42_RS01375 PF04563 RNA polymerase beta subunit CJP42_RS01375 PF04561 RNA polymerase Rpb2, domain 2 CJP42_RS01380 PF05000 RNA polymerase Rpb1, domain 4 CJP42_RS01380 PF00623 RNA polymerase Rpb1, domain 2 CJP42_RS01380 PF04983 RNA polymerase Rpb1, domain 3 CJP42_RS01380 PF04998 RNA polymerase Rpb1, domain 5 CJP42_RS01380 PF04997 RNA polymerase Rpb1, domain 1 CJP42_RS01400 PF04055 Radical SAM superfamily CJP42_RS01400 PF06968 Biotin and Thiamin Synthesis associated domain CJP42_RS01405 PF05690 Thiazole biosynthesis protein ThiG CJP42_RS01410 PF02597 ThiS family CJP42_RS01415 PF00899 ThiF family CJP42_RS01420 PF02581 Thiamine monophosphate synthase CJP42_RS01425 PF13667 ThiC-associated domain CJP42_RS01425 PF01964 Radical SAM ThiC family CJP42_RS01430 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CJP42_RS01435 PF09297 NADH pyrophosphatase zinc ribbon domain CJP42_RS01435 PF00293 NUDIX domain CJP42_RS01440 PF01208 Uroporphyrinogen decarboxylase (URO-D) CJP42_RS01445 PF04493 Endonuclease V CJP42_RS01450 PF04222 Protein of unknown function (DUF416) CJP42_RS01455 PF00216 Bacterial DNA-binding protein CJP42_RS01460 PF07356 Protein of unknown function (DUF1481) CJP42_RS01465 PF13801 Heavy-metal resistance CJP42_RS01475 PF00158 Sigma-54 interaction domain CJP42_RS01475 PF00072 Response regulator receiver domain CJP42_RS01475 PF02954 Bacterial regulatory protein, Fis family CJP42_RS01480 PF02844 Phosphoribosylglycinamide synthetase, N domain CJP42_RS01480 PF02843 Phosphoribosylglycinamide synthetase, C domain CJP42_RS01480 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJP42_RS01485 PF01808 AICARFT/IMPCHase bienzyme CJP42_RS01485 PF02142 MGS-like domain CJP42_RS01525 PF04219 Protein of unknown function, DUF CJP42_RS01535 PF01797 Transposase IS200 like CJP42_RS01550 PF04606 Ogr/Delta-like zinc finger CJP42_RS01585 PF17482 Phage tail sheath C-terminal domain CJP42_RS01585 PF04984 Phage tail sheath protein subtilisin-like domain CJP42_RS01590 PF02796 Helix-turn-helix domain of resolvase CJP42_RS01590 PF00239 Resolvase, N terminal domain CJP42_RS01600 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CJP42_RS01605 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CJP42_RS01610 PF07484 Phage Tail Collar Domain CJP42_RS01730 PF05840 Bacteriophage replication gene A protein (GPA) CJP42_RS01735 PF02086 D12 class N6 adenine-specific DNA methyltransferase CJP42_RS01740 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJP42_RS01750 PF17282 Family of unknown function (DUF5347) CJP42_RS01760 PF06892 Phage regulatory protein CII (CP76) CJP42_RS01770 PF16452 Bacteriophage CI repressor C-terminal domain CJP42_RS01770 PF07022 Bacteriophage CI repressor helix-turn-helix domain CJP42_RS01780 PF02899 Phage integrase, N-terminal SAM-like domain CJP42_RS01780 PF00589 Phage integrase family CJP42_RS01790 PF08046 IlvGEDA operon leader peptide CJP42_RS01795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJP42_RS01795 PF00205 Thiamine pyrophosphate enzyme, central domain CJP42_RS01795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJP42_RS01805 PF01063 Amino-transferase class IV CJP42_RS01810 PF00920 Dehydratase family CJP42_RS01815 PF00291 Pyridoxal-phosphate dependent enzyme CJP42_RS01815 PF00585 C-terminal regulatory domain of Threonine dehydratase CJP42_RS01830 PF03466 LysR substrate binding domain CJP42_RS01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS01835 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJP42_RS01835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJP42_RS01850 PF01048 Phosphorylase superfamily CJP42_RS01855 PF04973 Nicotinamide mononucleotide transporter CJP42_RS01860 PF13361 UvrD-like helicase C-terminal domain CJP42_RS01860 PF00580 UvrD/REP helicase N-terminal domain CJP42_RS01865 PF02541 Ppx/GppA phosphatase family CJP42_RS01875 PF00270 DEAD/DEAH box helicase CJP42_RS01875 PF00271 Helicase conserved C-terminal domain CJP42_RS01880 PF00085 Thioredoxin CJP42_RS01890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJP42_RS01890 PF07498 Rho termination factor, N-terminal domain CJP42_RS01890 PF07497 Rho termination factor, RNA-binding domain CJP42_RS01895 PF00953 Glycosyl transferase family 4 CJP42_RS01900 PF02706 Chain length determinant protein CJP42_RS01905 PF02350 UDP-N-acetylglucosamine 2-epimerase CJP42_RS01910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJP42_RS01910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJP42_RS01910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJP42_RS01915 PF16363 GDP-mannose 4,6 dehydratase CJP42_RS01920 PF00483 Nucleotidyl transferase CJP42_RS01930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJP42_RS01935 PF01943 Polysaccharide biosynthesis protein CJP42_RS01940 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CJP42_RS01945 PF06899 WzyE protein, O-antigen assembly polymerase CJP42_RS01950 PF03808 Glycosyl transferase WecB/TagA/CpsF family CJP42_RS01955 PF00324 Amino acid permease CJP42_RS01980 PF07219 HemY protein N-terminus CJP42_RS01980 PF07719 Tetratricopeptide repeat CJP42_RS01985 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CJP42_RS01990 PF02602 Uroporphyrinogen-III synthase HemD CJP42_RS01995 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CJP42_RS01995 PF03900 Porphobilinogen deaminase, C-terminal domain CJP42_RS02000 PF12633 Adenylate cyclase NT domain CJP42_RS02000 PF01295 Adenylate cyclase, class-I CJP42_RS02020 PF01491 Frataxin-like domain CJP42_RS02035 PF13627 Prokaryotic lipoprotein-attachment site CJP42_RS02040 PF01678 Diaminopimelate epimerase CJP42_RS02045 PF04340 Protein of unknown function, DUF484 CJP42_RS02050 PF00589 Phage integrase family CJP42_RS02050 PF02899 Phage integrase, N-terminal SAM-like domain CJP42_RS02055 PF13419 Haloacid dehalogenase-like hydrolase CJP42_RS02060 PF13361 UvrD-like helicase C-terminal domain CJP42_RS02060 PF00580 UvrD/REP helicase N-terminal domain CJP42_RS02070 PF01544 CorA-like Mg2+ transporter protein CJP42_RS02075 PF10947 Protein of unknown function (DUF2628) CJP42_RS02085 PF00892 EamA-like transporter family CJP42_RS02090 PF03061 Thioesterase superfamily CJP42_RS02095 PF02253 Phospholipase A1 CJP42_RS02100 PF00570 HRDC domain CJP42_RS02100 PF09382 RQC domain CJP42_RS02100 PF16124 RecQ zinc-binding CJP42_RS02100 PF00271 Helicase conserved C-terminal domain CJP42_RS02100 PF00270 DEAD/DEAH box helicase CJP42_RS02105 PF01810 LysE type translocator CJP42_RS02110 PF01810 LysE type translocator CJP42_RS02115 PF12146 Serine aminopeptidase, S33 CJP42_RS02125 PF00892 EamA-like transporter family CJP42_RS02130 PF03466 LysR substrate binding domain CJP42_RS02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS02135 PF01717 Cobalamin-independent synthase, Catalytic domain CJP42_RS02135 PF08267 Cobalamin-independent synthase, N-terminal domain CJP42_RS02140 PF04055 Radical SAM superfamily CJP42_RS02140 PF13186 Iron-sulfur cluster-binding domain CJP42_RS02145 PF01738 Dienelactone hydrolase family CJP42_RS02150 PF01048 Phosphorylase superfamily CJP42_RS02155 PF02646 RmuC family CJP42_RS02160 PF01209 ubiE/COQ5 methyltransferase family CJP42_RS02165 PF02036 SCP-2 sterol transfer family CJP42_RS02170 PF03109 ABC1 family CJP42_RS02175 PF02416 mttA/Hcf106 family CJP42_RS02185 PF00902 Sec-independent protein translocase protein (TatC) CJP42_RS02190 PF01026 TatD related DNase CJP42_RS02195 PF02357 Transcription termination factor nusG CJP42_RS02200 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CJP42_RS02205 PF00970 Oxidoreductase FAD-binding domain CJP42_RS02205 PF00175 Oxidoreductase NAD-binding domain CJP42_RS02210 PF17425 Arylsulfotransferase Ig-like domain CJP42_RS02210 PF05935 Arylsulfotransferase (ASST) CJP42_RS02215 PF00108 Thiolase, N-terminal domain CJP42_RS02215 PF02803 Thiolase, C-terminal domain CJP42_RS02230 PF00557 Metallopeptidase family M24 CJP42_RS02235 PF09186 Domain of unknown function (DUF1949) CJP42_RS02235 PF01205 Uncharacterized protein family UPF0029 CJP42_RS02240 PF02386 Cation transport protein CJP42_RS02245 PF12724 Flavodoxin domain CJP42_RS02275 PF13673 Acetyltransferase (GNAT) domain CJP42_RS02280 PF04204 Homoserine O-succinyltransferase CJP42_RS02285 PF01274 Malate synthase CJP42_RS02290 PF00463 Isocitrate lyase family CJP42_RS02295 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CJP42_RS02300 PF09339 IclR helix-turn-helix domain CJP42_RS02300 PF01614 Bacterial transcriptional regulator CJP42_RS02305 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJP42_RS02305 PF00809 Pterin binding enzyme CJP42_RS02305 PF02310 B12 binding domain CJP42_RS02305 PF02607 B12 binding domain CJP42_RS02305 PF02574 Homocysteine S-methyltransferase CJP42_RS02310 PF02690 Na+/Pi-cotransporter CJP42_RS02315 PF03575 Peptidase family S51 CJP42_RS02325 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CJP42_RS02330 PF00849 RNA pseudouridylate synthase CJP42_RS02330 PF01479 S4 domain CJP42_RS02335 PF11656 YjbD family (DUF3811) CJP42_RS02340 PF08220 DeoR-like helix-turn-helix domain CJP42_RS02340 PF00455 DeoR C terminal sensor domain CJP42_RS02360 PF00696 Amino acid kinase family CJP42_RS02360 PF01842 ACT domain CJP42_RS02365 PF00342 Phosphoglucose isomerase CJP42_RS02370 PF11106 Exopolysaccharide production protein YjbE CJP42_RS02375 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CJP42_RS02380 PF06251 Capsule biosynthesis GfcC CJP42_RS02385 PF06082 Exopolysaccharide biosynthesis protein YbjH CJP42_RS02390 PF06146 Phosphate-starvation-inducible E CJP42_RS02395 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS02400 PF14785 Maltose transport system permease protein MalF P2 domain CJP42_RS02400 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS02405 PF01547 Bacterial extracellular solute-binding protein CJP42_RS02410 PF17912 MalK OB fold domain CJP42_RS02410 PF00005 ABC transporter CJP42_RS02415 PF02264 LamB porin CJP42_RS02420 PF07148 Maltose operon periplasmic protein precursor (MalM) CJP42_RS02425 PF04345 Chorismate lyase CJP42_RS02430 PF01040 UbiA prenyltransferase family CJP42_RS02435 PF01553 Acyltransferase CJP42_RS02440 PF01219 Prokaryotic diacylglycerol kinase CJP42_RS02445 PF01726 LexA DNA binding domain CJP42_RS02445 PF00717 Peptidase S24-like CJP42_RS02450 PF01554 MatE CJP42_RS02460 PF05532 CsbD-like CJP42_RS02465 PF01475 Ferric uptake regulator family CJP42_RS02475 PF01207 Dihydrouridine synthase (Dus) CJP42_RS02480 PF09583 Phage shock protein G (Phageshock_PspG) CJP42_RS02485 PF00107 Zinc-binding dehydrogenase CJP42_RS02485 PF08240 Alcohol dehydrogenase GroES-like domain CJP42_RS02490 PF03796 DnaB-like helicase C terminal domain CJP42_RS02490 PF00772 DnaB-like helicase N terminal domain CJP42_RS02495 PF00842 Alanine racemase, C-terminal domain CJP42_RS02495 PF01168 Alanine racemase, N-terminal domain CJP42_RS02500 PF00155 Aminotransferase class I and II CJP42_RS02505 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CJP42_RS02510 PF01894 Uncharacterised protein family UPF0047 CJP42_RS02515 PF04237 YjbR CJP42_RS02530 PF00005 ABC transporter CJP42_RS02530 PF17760 UvrA interaction domain CJP42_RS02530 PF17755 UvrA DNA-binding domain CJP42_RS02540 PF00436 Single-strand binding protein family CJP42_RS02580 PF00664 ABC transporter transmembrane region CJP42_RS02580 PF00005 ABC transporter CJP42_RS02585 PF15940 Family of unknown function CJP42_RS02590 PF12792 CSS motif domain associated with EAL CJP42_RS02590 PF00563 EAL domain CJP42_RS02595 PF12833 Helix-turn-helix domain CJP42_RS02600 PF00376 MerR family regulatory protein CJP42_RS02600 PF09278 MerR, DNA binding CJP42_RS02615 PF00860 Permease family CJP42_RS02625 PF00999 Sodium/hydrogen exchanger family CJP42_RS02630 PF03466 LysR substrate binding domain CJP42_RS02630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS02635 PF03788 LrgA family CJP42_RS02640 PF04172 LrgB-like family CJP42_RS02645 PF00474 Sodium:solute symporter family CJP42_RS02650 PF04341 Protein of unknown function, DUF485 CJP42_RS02660 PF16177 Acetyl-coenzyme A synthetase N-terminus CJP42_RS02660 PF00501 AMP-binding enzyme CJP42_RS02660 PF13193 AMP-binding enzyme C-terminal domain CJP42_RS02670 PF02335 Cytochrome c552 CJP42_RS02675 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CJP42_RS02675 PF13435 Cytochrome c554 and c-prime CJP42_RS02680 PF00037 4Fe-4S binding domain CJP42_RS02680 PF13247 4Fe-4S dicluster domain CJP42_RS02690 PF01578 Cytochrome C assembly protein CJP42_RS02690 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CJP42_RS02695 PF03918 Cytochrome C biogenesis protein CJP42_RS02710 PF00375 Sodium:dicarboxylate symporter family CJP42_RS02715 PF08238 Sel1 repeat CJP42_RS02735 PF00583 Acetyltransferase (GNAT) family CJP42_RS02740 PF06983 3-demethylubiquinone-9 3-methyltransferase CJP42_RS02745 PF08274 PhnA Zinc-Ribbon CJP42_RS02745 PF03831 PhnA domain CJP42_RS02750 PF00083 Sugar (and other) transporter CJP42_RS02750 PF08946 Osmosensory transporter coiled coil CJP42_RS02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS02760 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS02765 PF00072 Response regulator receiver domain CJP42_RS02765 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS02770 PF00884 Sulfatase CJP42_RS02770 PF08019 Phosphoethanolamine transferase EptA/EptB CJP42_RS02775 PF13520 Amino acid permease CJP42_RS02780 PF12833 Helix-turn-helix domain CJP42_RS02785 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CJP42_RS02785 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CJP42_RS02785 PF01276 Orn/Lys/Arg decarboxylase, major domain CJP42_RS02790 PF12833 Helix-turn-helix domain CJP42_RS02795 PF11975 Family 4 glycosyl hydrolase C-terminal domain CJP42_RS02795 PF02056 Family 4 glycosyl hydrolase CJP42_RS02805 PF05681 Fumarate hydratase (Fumerase) CJP42_RS02805 PF05683 Fumarase C-terminus CJP42_RS02810 PF03605 Anaerobic c4-dicarboxylate membrane transporter CJP42_RS02820 PF00072 Response regulator receiver domain CJP42_RS02825 PF00989 PAS fold CJP42_RS02825 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CJP42_RS02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS02825 PF17203 Single cache domain 3 CJP42_RS02835 PF13247 4Fe-4S dicluster domain CJP42_RS02835 PF12800 4Fe-4S binding domain CJP42_RS02840 PF12800 4Fe-4S binding domain CJP42_RS02840 PF13247 4Fe-4S dicluster domain CJP42_RS02845 PF04976 DMSO reductase anchor subunit (DmsC) CJP42_RS02850 PF02613 Nitrate reductase delta subunit CJP42_RS02860 PF06977 SdiA-regulated CJP42_RS02875 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS02875 PF00072 Response regulator receiver domain CJP42_RS02880 PF12833 Helix-turn-helix domain CJP42_RS02900 PF01569 PAP2 superfamily CJP42_RS02910 PF13614 AAA domain CJP42_RS02915 PF00772 DnaB-like helicase N terminal domain CJP42_RS02915 PF03796 DnaB-like helicase C terminal domain CJP42_RS02925 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJP42_RS02960 PF01131 DNA topoisomerase CJP42_RS02960 PF01751 Toprim domain CJP42_RS02975 PF00436 Single-strand binding protein family CJP42_RS03020 PF00437 Type II/IV secretion system protein CJP42_RS03035 PF01464 Transglycosylase SLT domain CJP42_RS03045 PF04917 Bacterial shufflon protein, N-terminal constant region CJP42_RS03050 PF04917 Bacterial shufflon protein, N-terminal constant region CJP42_RS03055 PF00589 Phage integrase family CJP42_RS03185 PF01507 Phosphoadenosine phosphosulfate reductase family CJP42_RS03185 PF11922 Domain of unknown function (DUF3440) CJP42_RS03190 PF02195 ParB-like nuclease domain CJP42_RS03265 PF00817 impB/mucB/samB family CJP42_RS03265 PF11799 impB/mucB/samB family C-terminal domain CJP42_RS03265 PF13438 Domain of unknown function (DUF4113) CJP42_RS03280 PF04606 Ogr/Delta-like zinc finger CJP42_RS03320 PF00239 Resolvase, N terminal domain CJP42_RS03320 PF02796 Helix-turn-helix domain of resolvase CJP42_RS03325 PF05364 Salmonella type III secretion SopE effector N-terminus CJP42_RS03325 PF07487 SopE GEF domain CJP42_RS03330 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CJP42_RS03445 PF06183 DinI-like family CJP42_RS03455 PF05840 Bacteriophage replication gene A protein (GPA) CJP42_RS03460 PF02086 D12 class N6 adenine-specific DNA methyltransferase CJP42_RS03465 PF00929 Exonuclease CJP42_RS03470 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJP42_RS03480 PF17282 Family of unknown function (DUF5347) CJP42_RS03490 PF06892 Phage regulatory protein CII (CP76) CJP42_RS03500 PF16452 Bacteriophage CI repressor C-terminal domain CJP42_RS03500 PF07022 Bacteriophage CI repressor helix-turn-helix domain CJP42_RS03505 PF02899 Phage integrase, N-terminal SAM-like domain CJP42_RS03505 PF00589 Phage integrase family CJP42_RS03510 PF00717 Peptidase S24-like CJP42_RS03515 PF09857 Putative toxin of bacterial toxin-antitoxin pair CJP42_RS03525 PF13847 Methyltransferase domain CJP42_RS03545 PF01061 ABC-2 type transporter CJP42_RS03550 PF02563 Polysaccharide biosynthesis/export protein CJP42_RS03555 PF00534 Glycosyl transferases group 1 CJP42_RS03565 PF01370 NAD dependent epimerase/dehydratase family CJP42_RS03570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJP42_RS03570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJP42_RS03570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJP42_RS03595 PF00589 Phage integrase family CJP42_RS03595 PF02899 Phage integrase, N-terminal SAM-like domain CJP42_RS03635 PF13693 Winged helix-turn-helix DNA-binding CJP42_RS03670 PF13356 Arm DNA-binding domain CJP42_RS03670 PF00589 Phage integrase family CJP42_RS03685 PF11412 Disulphide bond corrector protein DsbC CJP42_RS03685 PF02683 Cytochrome C biogenesis protein transmembrane region CJP42_RS03690 PF03091 CutA1 divalent ion tolerance protein CJP42_RS03695 PF03605 Anaerobic c4-dicarboxylate membrane transporter CJP42_RS03700 PF10415 Fumarase C C-terminus CJP42_RS03700 PF00206 Lyase CJP42_RS03705 PF04186 FxsA cytoplasmic membrane protein CJP42_RS03710 PF13520 Amino acid permease CJP42_RS03715 PF00166 Chaperonin 10 Kd subunit CJP42_RS03720 PF00118 TCP-1/cpn60 chaperonin family CJP42_RS03725 PF13698 Domain of unknown function (DUF4156) CJP42_RS03730 PF15922 YjeJ-like CJP42_RS03735 PF04055 Radical SAM superfamily CJP42_RS03740 PF08207 Elongation factor P (EF-P) KOW-like domain CJP42_RS03740 PF01132 Elongation factor P (EF-P) OB domain CJP42_RS03740 PF09285 Elongation factor P, C-terminal CJP42_RS03745 PF08085 Entericidin EcnA/B family CJP42_RS03755 PF08085 Entericidin EcnA/B family CJP42_RS03760 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS03765 PF00893 Small Multidrug Resistance protein CJP42_RS03770 PF08212 Lipocalin-like domain CJP42_RS03775 PF02313 Fumarate reductase subunit D CJP42_RS03780 PF02300 Fumarate reductase subunit C CJP42_RS03785 PF13085 2Fe-2S iron-sulfur cluster binding domain CJP42_RS03785 PF13183 4Fe-4S dicluster domain CJP42_RS03790 PF02910 Fumarate reductase flavoprotein C-term CJP42_RS03790 PF00890 FAD binding domain CJP42_RS03795 PF00152 tRNA synthetases class II (D, K and N) CJP42_RS03800 PF13520 Amino acid permease CJP42_RS03815 PF02666 Phosphatidylserine decarboxylase CJP42_RS03820 PF03193 RsgA GTPase CJP42_RS03825 PF00929 Exonuclease CJP42_RS03830 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJP42_RS03845 PF08331 Domain of unknown function (DUF1730) CJP42_RS03850 PF03853 YjeF-related protein N-terminus CJP42_RS03850 PF01256 Carbohydrate kinase CJP42_RS03855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CJP42_RS03860 PF01520 N-acetylmuramoyl-L-alanine amidase CJP42_RS03865 PF08676 MutL C terminal dimerisation domain CJP42_RS03865 PF01119 DNA mismatch repair protein, C-terminal domain CJP42_RS03875 PF17209 Hfq protein CJP42_RS03880 PF01926 50S ribosome-binding GTPase CJP42_RS03880 PF16360 GTP-binding GTPase Middle Region CJP42_RS03880 PF13167 GTP-binding GTPase N-terminal CJP42_RS03885 PF12221 Bacterial membrane protein N terminal CJP42_RS03885 PF01145 SPFH domain / Band 7 family CJP42_RS03890 PF01145 SPFH domain / Band 7 family CJP42_RS03895 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CJP42_RS03900 PF00709 Adenylosuccinate synthetase CJP42_RS03910 PF02082 Transcriptional regulator CJP42_RS03915 PF00773 RNB domain CJP42_RS03915 PF00575 S1 RNA binding domain CJP42_RS03915 PF08461 Ribonuclease R winged-helix domain CJP42_RS03915 PF17876 Cold shock domain CJP42_RS03915 PF08206 Ribonuclease B OB domain CJP42_RS03920 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJP42_RS03920 PF00588 SpoU rRNA Methylase family CJP42_RS03925 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) CJP42_RS03935 PF10679 Protein of unknown function (DUF2491) CJP42_RS03940 PF03994 Domain of Unknown Function (DUF350) CJP42_RS03945 PF06693 Protein of unknown function (DUF1190) CJP42_RS03950 PF03738 Glutathionylspermidine synthase preATP-grasp CJP42_RS03955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJP42_RS03955 PF02770 Acyl-CoA dehydrogenase, middle domain CJP42_RS03955 PF18158 Adaptive response protein AidB N-terminal domain CJP42_RS03960 PF07338 Protein of unknown function (DUF1471) CJP42_RS03965 PF07338 Protein of unknown function (DUF1471) CJP42_RS03970 PF00326 Prolyl oligopeptidase family CJP42_RS03975 PF00455 DeoR C terminal sensor domain CJP42_RS03975 PF08220 DeoR-like helix-turn-helix domain CJP42_RS03985 PF03611 PTS system sugar-specific permease component CJP42_RS03995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJP42_RS04000 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJP42_RS04005 PF01261 Xylose isomerase-like TIM barrel CJP42_RS04010 PF00596 Class II Aldolase and Adducin N-terminal domain CJP42_RS04015 PF07338 Protein of unknown function (DUF1471) CJP42_RS04030 PF01250 Ribosomal protein S6 CJP42_RS04035 PF00436 Single-strand binding protein family CJP42_RS04040 PF01084 Ribosomal protein S18 CJP42_RS04045 PF01281 Ribosomal protein L9, N-terminal domain CJP42_RS04045 PF03948 Ribosomal protein L9, C-terminal domain CJP42_RS04055 PF04225 Opacity-associated protein A LysM-like domain CJP42_RS04055 PF08525 Opacity-associated protein A N-terminal motif CJP42_RS04065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJP42_RS04065 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CJP42_RS04070 PF00324 Amino acid permease CJP42_RS04085 PF01814 Hemerythrin HHE cation binding domain CJP42_RS04085 PF04405 Domain of Unknown function (DUF542) CJP42_RS04090 PF00892 EamA-like transporter family CJP42_RS04095 PF05368 NmrA-like family CJP42_RS04100 PF01638 HxlR-like helix-turn-helix CJP42_RS04105 PF00149 Calcineurin-like phosphoesterase CJP42_RS04105 PF02872 5'-nucleotidase, C-terminal domain CJP42_RS04115 PF00459 Inositol monophosphatase family CJP42_RS04120 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CJP42_RS04130 PF06526 Protein of unknown function (DUF1107) CJP42_RS04135 PF01797 Transposase IS200 like CJP42_RS04145 PF00571 CBS domain CJP42_RS04145 PF01595 Cyclin M transmembrane N-terminal domain CJP42_RS04145 PF03471 Transporter associated domain CJP42_RS04150 PF01625 Peptide methionine sulfoxide reductase CJP42_RS04155 PF17243 POTRA domain TamA domain 1 CJP42_RS04155 PF07244 Surface antigen variable number repeat CJP42_RS04155 PF01103 Surface antigen CJP42_RS04160 PF04357 TamB, inner membrane protein subunit of TAM complex CJP42_RS04165 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CJP42_RS04170 PF07690 Major Facilitator Superfamily CJP42_RS04175 PF01979 Amidohydrolase family CJP42_RS04180 PF00719 Inorganic pyrophosphatase CJP42_RS04185 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CJP42_RS04190 PF01225 Mur ligase family, catalytic domain CJP42_RS04190 PF02875 Mur ligase family, glutamate ligase domain CJP42_RS04190 PF08245 Mur ligase middle domain CJP42_RS04195 PF04751 Protein of unknown function (DUF615) CJP42_RS04200 PF01523 Putative modulator of DNA gyrase CJP42_RS04205 PF07361 Cytochrome b562 CJP42_RS04240 PF01979 Amidohydrolase family CJP42_RS04245 PF03841 L-seryl-tRNA selenium transferase CJP42_RS04250 PF07071 KDGP aldolase CJP42_RS04255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJP42_RS04255 PF00874 PRD domain CJP42_RS04255 PF05043 Mga helix-turn-helix domain CJP42_RS04255 PF08279 HTH domain CJP42_RS04260 PF04221 RelB antitoxin CJP42_RS04265 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CJP42_RS04275 PF13597 Anaerobic ribonucleoside-triphosphate reductase CJP42_RS04275 PF03477 ATP cone domain CJP42_RS04280 PF00128 Alpha amylase, catalytic domain CJP42_RS04280 PF11941 Domain of unknown function (DUF3459) CJP42_RS04285 PF02378 Phosphotransferase system, EIIC CJP42_RS04285 PF00367 phosphotransferase system, EIIB CJP42_RS04295 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS04300 PF17059 MgtA leader peptide CJP42_RS04305 PF00690 Cation transporter/ATPase, N-terminus CJP42_RS04305 PF00689 Cation transporting ATPase, C-terminus CJP42_RS04315 PF01042 Endoribonuclease L-PSP CJP42_RS04320 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CJP42_RS04320 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CJP42_RS04325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJP42_RS04325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJP42_RS04330 PF08052 PyrBI operon leader peptide CJP42_RS04340 PF01316 Arginine repressor, DNA binding domain CJP42_RS04340 PF02863 Arginine repressor, C-terminal domain CJP42_RS04345 PF03606 C4-dicarboxylate anaerobic carrier CJP42_RS04350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJP42_RS04350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJP42_RS04355 PF00696 Amino acid kinase family CJP42_RS04375 PF04074 YhcH/YjgK/YiaL CJP42_RS04380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJP42_RS04380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJP42_RS04385 PF06877 Regulator of ribonuclease activity B CJP42_RS04390 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CJP42_RS04395 PF12276 Protein of unknown function (DUF3617) CJP42_RS04400 PF00583 Acetyltransferase (GNAT) family CJP42_RS04405 PF05987 Bacterial protein of unknown function (DUF898) CJP42_RS04410 PF00133 tRNA synthetases class I (I, L, M and V) CJP42_RS04410 PF10458 Valyl tRNA synthetase tRNA binding arm CJP42_RS04410 PF08264 Anticodon-binding domain of tRNA CJP42_RS04415 PF04364 DNA polymerase III chi subunit, HolC CJP42_RS04420 PF00883 Cytosol aminopeptidase family, catalytic domain CJP42_RS04420 PF02789 Cytosol aminopeptidase family, N-terminal domain CJP42_RS04435 PF03739 Lipopolysaccharide export system permease LptF/LptG CJP42_RS04440 PF03739 Lipopolysaccharide export system permease LptF/LptG CJP42_RS04445 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS04450 PF02447 GntP family permease CJP42_RS04460 PF13356 Arm DNA-binding domain CJP42_RS04460 PF00589 Phage integrase family CJP42_RS04465 PF00069 Protein kinase domain CJP42_RS04465 PF03793 PASTA domain CJP42_RS04470 PF00069 Protein kinase domain CJP42_RS04470 PF03793 PASTA domain CJP42_RS04490 PF04606 Ogr/Delta-like zinc finger CJP42_RS04520 PF17345 Family of unknown function (DUF5375) CJP42_RS04550 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS04550 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS04555 PF13953 PapC C-terminal domain CJP42_RS04555 PF13954 PapC N-terminal domain CJP42_RS04555 PF00577 Outer membrane usher protein CJP42_RS04565 PF12833 Helix-turn-helix domain CJP42_RS04585 PF01323 DSBA-like thioredoxin domain CJP42_RS04590 PF06977 SdiA-regulated CJP42_RS04625 PF01709 Transcriptional regulator CJP42_RS04630 PF13847 Methyltransferase domain CJP42_RS04635 PF09857 Putative toxin of bacterial toxin-antitoxin pair CJP42_RS04660 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJP42_RS04660 PF03625 Domain of unknown function DUF302 CJP42_RS04665 PF01738 Dienelactone hydrolase family CJP42_RS04675 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS04675 PF07729 FCD domain CJP42_RS04680 PF00579 tRNA synthetases class I (W and Y) CJP42_RS04695 PF01177 Asp/Glu/Hydantoin racemase CJP42_RS04700 PF03466 LysR substrate binding domain CJP42_RS04700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS04705 PF01979 Amidohydrolase family CJP42_RS04710 PF07670 Nucleoside recognition CJP42_RS04715 PF07670 Nucleoside recognition CJP42_RS04720 PF06779 Uncharacterised MFS-type transporter YbfB CJP42_RS04725 PF04286 Protein of unknown function (DUF445) CJP42_RS04730 PF07690 Major Facilitator Superfamily CJP42_RS04735 PF04754 Putative transposase, YhgA-like CJP42_RS04760 PF08845 Toxin SymE, type I toxin-antitoxin system CJP42_RS04765 PF01420 Type I restriction modification DNA specificity domain CJP42_RS04770 PF02384 N-6 DNA Methylase CJP42_RS04775 PF08463 EcoEI R protein C-terminal CJP42_RS04775 PF04851 Type III restriction enzyme, res subunit CJP42_RS04775 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CJP42_RS04775 PF00271 Helicase conserved C-terminal domain CJP42_RS04780 PF14338 Mrr N-terminal domain CJP42_RS04780 PF04471 Restriction endonuclease CJP42_RS04795 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJP42_RS04795 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJP42_RS04800 PF04328 Selenoprotein, putative CJP42_RS04805 PF02554 Carbon starvation protein CstA CJP42_RS04805 PF13722 5TM C-terminal transporter carbon starvation CstA CJP42_RS04815 PF00884 Sulfatase CJP42_RS04820 PF10696 Protein of unknown function (DUF2501) CJP42_RS04825 PF01695 IstB-like ATP binding protein CJP42_RS04830 PF17948 DnaT DNA-binding domain CJP42_RS04835 PF12821 Threonine/Serine exporter, ThrE CJP42_RS04840 PF06738 Putative threonine/serine exporter CJP42_RS04845 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS04850 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS04855 PF04073 Aminoacyl-tRNA editing domain CJP42_RS04860 PF11575 FhuF 2Fe-2S C-terminal domain CJP42_RS04860 PF06276 Ferric iron reductase FhuF-like transporter CJP42_RS04865 PF05230 MASE2 domain CJP42_RS04865 PF00990 Diguanylate cyclase, GGDEF domain CJP42_RS04870 PF07256 Protein of unknown function (DUF1435) CJP42_RS04890 PF05175 Methyltransferase small domain CJP42_RS04890 PF08468 Methyltransferase small domain N-terminal CJP42_RS04895 PF03603 DNA polymerase III psi subunit CJP42_RS04900 PF00583 Acetyltransferase (GNAT) family CJP42_RS04905 PF13419 Haloacid dehalogenase-like hydrolase CJP42_RS04910 PF00009 Elongation factor Tu GTP binding domain CJP42_RS04910 PF16658 Class II release factor RF3, C-terminal domain CJP42_RS04910 PF03144 Elongation factor Tu domain 2 CJP42_RS04915 PF04972 BON domain CJP42_RS04920 PF07043 Protein of unknown function (DUF1328) CJP42_RS04925 PF01734 Patatin-like phospholipase CJP42_RS04930 PF01026 TatD related DNase CJP42_RS04935 PF04055 Radical SAM superfamily CJP42_RS04940 PF11230 Protein of unknown function (DUF3029) CJP42_RS04945 PF01791 DeoC/LacD family aldolase CJP42_RS04950 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CJP42_RS04950 PF00591 Glycosyl transferase family, a/b domain CJP42_RS04950 PF02885 Glycosyl transferase family, helical bundle domain CJP42_RS04955 PF01676 Metalloenzyme superfamily CJP42_RS04960 PF01048 Phosphorylase superfamily CJP42_RS04970 PF03099 Biotin/lipoate A/B protein ligase family CJP42_RS04970 PF10437 Bacterial lipoate protein ligase C-terminus CJP42_RS04975 PF10144 Bacterial virulence factor haemolysin CJP42_RS04985 PF18429 Domain of unknown function (DUF5609) CJP42_RS04990 PF18073 Rubredoxin metal binding domain CJP42_RS04995 PF13521 AAA domain CJP42_RS04995 PF01381 Helix-turn-helix CJP42_RS05000 PF00005 ABC transporter CJP42_RS05000 PF12848 ABC transporter CJP42_RS05010 PF01464 Transglycosylase SLT domain CJP42_RS05010 PF14718 Soluble lytic murein transglycosylase L domain CJP42_RS05015 PF01371 Trp repressor protein CJP42_RS05020 PF01931 Protein of unknown function DUF84 CJP42_RS05025 PF00300 Histidine phosphatase superfamily (branch 1) CJP42_RS05030 PF06445 GyrI-like small molecule binding domain CJP42_RS05030 PF12833 Helix-turn-helix domain CJP42_RS05035 PF05981 CreA protein CJP42_RS05040 PF00072 Response regulator receiver domain CJP42_RS05040 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS05045 PF00672 HAMP domain CJP42_RS05045 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS05050 PF06123 Inner membrane protein CreD CJP42_RS05070 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS05070 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS05080 PF15977 Winged helix-turn-helix DNA binding CJP42_RS05090 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS05090 PF00072 Response regulator receiver domain CJP42_RS05100 PF00588 SpoU rRNA Methylase family CJP42_RS05105 PF08254 Threonine leader peptide CJP42_RS05110 PF00742 Homoserine dehydrogenase CJP42_RS05110 PF13840 ACT domain CJP42_RS05110 PF01842 ACT domain CJP42_RS05110 PF03447 Homoserine dehydrogenase, NAD binding domain CJP42_RS05110 PF00696 Amino acid kinase family CJP42_RS05115 PF00288 GHMP kinases N terminal domain CJP42_RS05115 PF08544 GHMP kinases C terminal CJP42_RS05120 PF00291 Pyridoxal-phosphate dependent enzyme CJP42_RS05120 PF14821 Threonine synthase N terminus CJP42_RS05125 PF03883 Peroxide stress protein YaaA CJP42_RS05130 PF01235 Sodium:alanine symporter family CJP42_RS05135 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJP42_RS05140 PF00994 Probable molybdopterin binding domain CJP42_RS05145 PF01184 GPR1/FUN34/yaaH family CJP42_RS05150 PF13099 Domain of unknown function (DUF3944) CJP42_RS05150 PF03981 Ubiquinol-cytochrome C chaperone CJP42_RS05155 PF10807 Protein of unknown function (DUF2541) CJP42_RS05160 PF00012 Hsp70 protein CJP42_RS05165 PF00684 DnaJ central domain CJP42_RS05165 PF01556 DnaJ C terminal domain CJP42_RS05165 PF00226 DnaJ domain CJP42_RS05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS05170 PF03466 LysR substrate binding domain CJP42_RS05190 PF00704 Glycosyl hydrolases family 18 CJP42_RS05205 PF00419 Fimbrial protein CJP42_RS05210 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS05210 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS05220 PF00419 Fimbrial protein CJP42_RS05225 PF00419 Fimbrial protein CJP42_RS05230 PF16970 Type-1 fimbrial protein, A CJP42_RS05235 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS05235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS05255 PF03466 LysR substrate binding domain CJP42_RS05270 PF02872 5'-nucleotidase, C-terminal domain CJP42_RS05270 PF00149 Calcineurin-like phosphoesterase CJP42_RS05280 PF16385 Domain of unknown function CJP42_RS05280 PF00884 Sulfatase CJP42_RS05285 PF04055 Radical SAM superfamily CJP42_RS05285 PF13186 Iron-sulfur cluster-binding domain CJP42_RS05300 PF06965 Na+/H+ antiporter 1 CJP42_RS05305 PF03466 LysR substrate binding domain CJP42_RS05305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS05310 PF01055 Glycosyl hydrolases family 31 CJP42_RS05320 PF01649 Ribosomal protein S20 CJP42_RS05325 PF10837 Protein of unknown function (DUF2575) CJP42_RS05330 PF06574 FAD synthetase CJP42_RS05330 PF01687 Riboflavin kinase CJP42_RS05335 PF08264 Anticodon-binding domain of tRNA CJP42_RS05335 PF00133 tRNA synthetases class I (I, L, M and V) CJP42_RS05335 PF06827 Zinc finger found in FPG and IleRS CJP42_RS05340 PF01252 Signal peptidase (SPase) II CJP42_RS05345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJP42_RS05350 PF02401 LytB protein CJP42_RS05360 PF01156 Inosine-uridine preferring nucleoside hydrolase CJP42_RS05365 PF12431 Transcriptional regulator CJP42_RS05365 PF00072 Response regulator receiver domain CJP42_RS05370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS05370 PF17203 Single cache domain 3 CJP42_RS05375 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CJP42_RS05380 PF00364 Biotin-requiring enzyme CJP42_RS05380 PF00682 HMGL-like CJP42_RS05380 PF02436 Conserved carboxylase domain CJP42_RS05385 PF04277 Oxaloacetate decarboxylase, gamma chain CJP42_RS05390 PF03390 2-hydroxycarboxylate transporter family CJP42_RS05395 PF08218 Citrate lyase ligase C-terminal domain CJP42_RS05395 PF00583 Acetyltransferase (GNAT) family CJP42_RS05400 PF06857 Malonate decarboxylase delta subunit (MdcD) CJP42_RS05405 PF03328 HpcH/HpaI aldolase/citrate lyase family CJP42_RS05410 PF04223 Citrate lyase, alpha subunit (CitF) CJP42_RS05415 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CJP42_RS05420 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CJP42_RS05425 PF01113 Dihydrodipicolinate reductase, N-terminus CJP42_RS05425 PF05173 Dihydrodipicolinate reductase, C-terminus CJP42_RS05435 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CJP42_RS05435 PF00117 Glutamine amidotransferase class-I CJP42_RS05440 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJP42_RS05440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJP42_RS05440 PF02142 MGS-like domain CJP42_RS05445 PF07180 CaiF/GrlA transcriptional regulator CJP42_RS05450 PF00132 Bacterial transferase hexapeptide (six repeats) CJP42_RS05455 PF00378 Enoyl-CoA hydratase/isomerase CJP42_RS05460 PF13193 AMP-binding enzyme C-terminal domain CJP42_RS05460 PF00501 AMP-binding enzyme CJP42_RS05465 PF02515 CoA-transferase family III CJP42_RS05470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJP42_RS05470 PF02770 Acyl-CoA dehydrogenase, middle domain CJP42_RS05470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJP42_RS05475 PF02028 BCCT, betaine/carnitine/choline family transporter CJP42_RS05485 PF01012 Electron transfer flavoprotein domain CJP42_RS05490 PF01012 Electron transfer flavoprotein domain CJP42_RS05490 PF00766 Electron transfer flavoprotein FAD-binding domain CJP42_RS05495 PF01494 FAD binding domain CJP42_RS05505 PF00083 Sugar (and other) transporter CJP42_RS05510 PF06004 Bacterial protein of unknown function (DUF903) CJP42_RS05540 PF02525 Flavodoxin-like fold CJP42_RS05545 PF02254 TrkA-N domain CJP42_RS05545 PF00999 Sodium/hydrogen exchanger family CJP42_RS05555 PF00186 Dihydrofolate reductase CJP42_RS05560 PF00149 Calcineurin-like phosphoesterase CJP42_RS05565 PF04379 ApaG domain CJP42_RS05570 PF00398 Ribosomal RNA adenine dimethylase CJP42_RS05575 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJP42_RS05580 PF09312 SurA N-terminal domain CJP42_RS05580 PF00639 PPIC-type PPIASE domain CJP42_RS05585 PF04453 LPS transport system D CJP42_RS05585 PF03968 OstA-like protein CJP42_RS05590 PF00226 DnaJ domain CJP42_RS05590 PF05099 Tellurite resistance protein TerB CJP42_RS05595 PF00849 RNA pseudouridylate synthase CJP42_RS05600 PF00176 SNF2 family N-terminal domain CJP42_RS05600 PF18339 RapA N-terminal Tudor like domain 1 CJP42_RS05600 PF00271 Helicase conserved C-terminal domain CJP42_RS05600 PF18337 RapA N-terminal Tudor like domain CJP42_RS05600 PF12137 RNA polymerase recycling family C-terminal CJP42_RS05610 PF00136 DNA polymerase family B CJP42_RS05610 PF03104 DNA polymerase family B, exonuclease domain CJP42_RS05625 PF01385 Probable transposase CJP42_RS05625 PF07282 Putative transposase DNA-binding domain CJP42_RS05625 PF12323 Helix-turn-helix domain CJP42_RS05645 PF00596 Class II Aldolase and Adducin N-terminal domain CJP42_RS05650 PF11762 L-arabinose isomerase C-terminal domain CJP42_RS05650 PF02610 L-arabinose isomerase CJP42_RS05655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJP42_RS05660 PF12833 Helix-turn-helix domain CJP42_RS05660 PF02311 AraC-like ligand binding domain CJP42_RS05665 PF09335 SNARE associated Golgi protein CJP42_RS05670 PF00005 ABC transporter CJP42_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS05685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJP42_RS05685 PF12793 Sugar transport-related sRNA regulator N-term CJP42_RS05695 PF00694 Aconitase C-terminal domain CJP42_RS05700 PF00330 Aconitase family (aconitate hydratase) CJP42_RS05705 PF00180 Isocitrate/isopropylmalate dehydrogenase CJP42_RS05710 PF08502 LeuA allosteric (dimerisation) domain CJP42_RS05710 PF00682 HMGL-like CJP42_RS05715 PF08054 Leucine operon leader peptide CJP42_RS05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS05720 PF03466 LysR substrate binding domain CJP42_RS05725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJP42_RS05725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJP42_RS05725 PF00205 Thiamine pyrophosphate enzyme, central domain CJP42_RS05730 PF10369 Small subunit of acetolactate synthase CJP42_RS05735 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS05735 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJP42_RS05740 PF02381 MraZ protein, putative antitoxin-like CJP42_RS05745 PF01795 MraW methylase family CJP42_RS05750 PF04999 Cell division protein FtsL CJP42_RS05755 PF00905 Penicillin binding protein transpeptidase domain CJP42_RS05755 PF03717 Penicillin-binding Protein dimerisation domain CJP42_RS05760 PF02875 Mur ligase family, glutamate ligase domain CJP42_RS05760 PF08245 Mur ligase middle domain CJP42_RS05760 PF01225 Mur ligase family, catalytic domain CJP42_RS05765 PF08245 Mur ligase middle domain CJP42_RS05765 PF01225 Mur ligase family, catalytic domain CJP42_RS05765 PF02875 Mur ligase family, glutamate ligase domain CJP42_RS05770 PF00953 Glycosyl transferase family 4 CJP42_RS05770 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CJP42_RS05775 PF08245 Mur ligase middle domain CJP42_RS05775 PF02875 Mur ligase family, glutamate ligase domain CJP42_RS05780 PF01098 Cell cycle protein CJP42_RS05785 PF03033 Glycosyltransferase family 28 N-terminal domain CJP42_RS05785 PF04101 Glycosyltransferase family 28 C-terminal domain CJP42_RS05790 PF02875 Mur ligase family, glutamate ligase domain CJP42_RS05790 PF08245 Mur ligase middle domain CJP42_RS05790 PF01225 Mur ligase family, catalytic domain CJP42_RS05795 PF07478 D-ala D-ala ligase C-terminus CJP42_RS05795 PF01820 D-ala D-ala ligase N-terminus CJP42_RS05800 PF03799 Cell division protein FtsQ CJP42_RS05800 PF08478 POTRA domain, FtsQ-type CJP42_RS05805 PF02491 SHS2 domain inserted in FTSA CJP42_RS05810 PF12327 FtsZ family, C-terminal domain CJP42_RS05810 PF00091 Tubulin/FtsZ family, GTPase domain CJP42_RS05815 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CJP42_RS05820 PF06558 Secretion monitor precursor protein (SecM) CJP42_RS05825 PF07517 SecA DEAD-like domain CJP42_RS05825 PF07516 SecA Wing and Scaffold domain CJP42_RS05825 PF01043 SecA preprotein cross-linking domain CJP42_RS05825 PF02810 SEC-C motif CJP42_RS05830 PF00293 NUDIX domain CJP42_RS05835 PF00248 Aldo/keto reductase family CJP42_RS05840 PF03466 LysR substrate binding domain CJP42_RS05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS05845 PF03884 DNA gyrase inhibitor YacG CJP42_RS05850 PF07072 Cell division protein CJP42_RS05855 PF01121 Dephospho-CoA kinase CJP42_RS05860 PF00478 IMP dehydrogenase / GMP reductase domain CJP42_RS05865 PF00482 Type II secretion system (T2SS), protein F CJP42_RS05870 PF00437 Type II/IV secretion system protein CJP42_RS05870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CJP42_RS05875 PF07963 Prokaryotic N-terminal methylation motif CJP42_RS05885 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJP42_RS05885 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJP42_RS05890 PF01510 N-acetylmuramoyl-L-alanine amidase CJP42_RS05895 PF17113 Regulatory signalling modulator protein AmpE CJP42_RS05900 PF04616 Glycosyl hydrolases family 43 CJP42_RS05900 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CJP42_RS05910 PF00324 Amino acid permease CJP42_RS05915 PF07729 FCD domain CJP42_RS05915 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS05920 PF17831 Pyruvate dehydrogenase E1 component middle domain CJP42_RS05920 PF00456 Transketolase, thiamine diphosphate binding domain CJP42_RS05925 PF02817 e3 binding domain CJP42_RS05925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJP42_RS05925 PF00364 Biotin-requiring enzyme CJP42_RS05930 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS05930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJP42_RS05945 PF11737 Protein of unknown function (DUF3300) CJP42_RS05955 PF06434 Aconitate hydratase 2 N-terminus CJP42_RS05955 PF00330 Aconitase family (aconitate hydratase) CJP42_RS05955 PF11791 Aconitate B N-terminal domain CJP42_RS05960 PF06062 Uncharacterised protein family (UPF0231) CJP42_RS05965 PF03812 2-keto-3-deoxygluconate permease CJP42_RS05970 PF17042 Nucleotide-binding C-terminal domain CJP42_RS05970 PF07005 Sugar-binding N-terminal domain CJP42_RS05975 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJP42_RS05980 PF08220 DeoR-like helix-turn-helix domain CJP42_RS05980 PF00455 DeoR C terminal sensor domain CJP42_RS05985 PF02675 S-adenosylmethionine decarboxylase CJP42_RS05990 PF17284 Spermidine synthase tetramerisation domain CJP42_RS05995 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CJP42_RS06000 PF00394 Multicopper oxidase CJP42_RS06000 PF07731 Multicopper oxidase CJP42_RS06000 PF07732 Multicopper oxidase CJP42_RS06005 PF01011 PQQ enzyme repeat CJP42_RS06010 PF00156 Phosphoribosyl transferase domain CJP42_RS06015 PF00484 Carbonic anhydrase CJP42_RS06020 PF00005 ABC transporter CJP42_RS06025 PF01061 ABC-2 type transporter CJP42_RS06030 PF03610 PTS system fructose IIA component CJP42_RS06035 PF01522 Polysaccharide deacetylase CJP42_RS06040 PF02261 Aspartate decarboxylase CJP42_RS06045 PF02569 Pantoate-beta-alanine ligase CJP42_RS06050 PF02548 Ketopantoate hydroxymethyltransferase CJP42_RS06055 PF00419 Fimbrial protein CJP42_RS06065 PF00419 Fimbrial protein CJP42_RS06070 PF00419 Fimbrial protein CJP42_RS06075 PF00577 Outer membrane usher protein CJP42_RS06075 PF13954 PapC N-terminal domain CJP42_RS06075 PF13953 PapC C-terminal domain CJP42_RS06080 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS06080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS06090 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CJP42_RS06095 PF12626 Polymerase A arginine-rich C-terminus CJP42_RS06095 PF12627 Probable RNA and SrmB- binding site of polymerase A CJP42_RS06095 PF01743 Poly A polymerase head domain CJP42_RS06100 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJP42_RS06105 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJP42_RS06110 PF03749 Sugar fermentation stimulation protein RE domain CJP42_RS06110 PF17746 SfsA N-terminal OB domain CJP42_RS06115 PF02834 LigT like Phosphoesterase CJP42_RS06120 PF00270 DEAD/DEAH box helicase CJP42_RS06120 PF04408 Helicase associated domain (HA2) CJP42_RS06120 PF08482 ATP-dependent helicase C-terminal CJP42_RS06120 PF00271 Helicase conserved C-terminal domain CJP42_RS06125 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CJP42_RS06125 PF00912 Transglycosylase CJP42_RS06125 PF00905 Penicillin binding protein transpeptidase domain CJP42_RS06125 PF14814 Bifunctional transglycosylase second domain CJP42_RS06135 PF00005 ABC transporter CJP42_RS06140 PF01497 Periplasmic binding protein CJP42_RS06145 PF01032 FecCD transport family CJP42_RS06150 PF00202 Aminotransferase class-III CJP42_RS06155 PF00654 Voltage gated chloride channel CJP42_RS06160 PF01521 Iron-sulphur cluster biosynthesis CJP42_RS06165 PF03458 UPF0126 domain CJP42_RS06170 PF01497 Periplasmic binding protein CJP42_RS06175 PF01048 Phosphorylase superfamily CJP42_RS06180 PF01966 HD domain CJP42_RS06180 PF13286 Phosphohydrolase-associated domain CJP42_RS06185 PF00595 PDZ domain CJP42_RS06190 PF17853 GGDEF-like domain CJP42_RS06190 PF13556 PucR C-terminal helix-turn-helix domain CJP42_RS06190 PF05651 Putative sugar diacid recognition CJP42_RS06195 PF11944 Protein of unknown function (DUF3461) CJP42_RS06200 PF00083 Sugar (and other) transporter CJP42_RS06200 PF07690 Major Facilitator Superfamily CJP42_RS06205 PF00132 Bacterial transferase hexapeptide (six repeats) CJP42_RS06205 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CJP42_RS06205 PF14602 Hexapeptide repeat of succinyl-transferase CJP42_RS06210 PF01966 HD domain CJP42_RS06210 PF08335 GlnD PII-uridylyltransferase CJP42_RS06210 PF01842 ACT domain CJP42_RS06210 PF01909 Nucleotidyltransferase domain CJP42_RS06215 PF00557 Metallopeptidase family M24 CJP42_RS06220 PF00318 Ribosomal protein S2 CJP42_RS06230 PF00889 Elongation factor TS CJP42_RS06235 PF00696 Amino acid kinase family CJP42_RS06240 PF01765 Ribosome recycling factor CJP42_RS06245 PF13288 DXP reductoisomerase C-terminal domain CJP42_RS06245 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJP42_RS06245 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJP42_RS06255 PF01255 Putative undecaprenyl diphosphate synthase CJP42_RS06265 PF02163 Peptidase family M50 CJP42_RS06265 PF17820 PDZ domain CJP42_RS06270 PF07244 Surface antigen variable number repeat CJP42_RS06270 PF01103 Surface antigen CJP42_RS06275 PF03938 Outer membrane protein (OmpH-like) CJP42_RS06280 PF00132 Bacterial transferase hexapeptide (six repeats) CJP42_RS06280 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CJP42_RS06285 PF07977 FabA-like domain CJP42_RS06290 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CJP42_RS06290 PF00132 Bacterial transferase hexapeptide (six repeats) CJP42_RS06295 PF02684 Lipid-A-disaccharide synthetase CJP42_RS06300 PF01351 Ribonuclease HII CJP42_RS06305 PF02811 PHP domain CJP42_RS06305 PF01336 OB-fold nucleic acid binding domain CJP42_RS06305 PF14579 Helix-hairpin-helix motif CJP42_RS06305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJP42_RS06305 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJP42_RS06310 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CJP42_RS06325 PF01276 Orn/Lys/Arg decarboxylase, major domain CJP42_RS06325 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CJP42_RS06325 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CJP42_RS06330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJP42_RS06335 PF09179 TilS substrate binding domain CJP42_RS06335 PF01171 PP-loop family CJP42_RS06335 PF11734 TilS substrate C-terminal domain CJP42_RS06340 PF07073 Modulator of Rho-dependent transcription termination (ROF) CJP42_RS06345 PF06786 Uncharacterised protein family (UPF0253) CJP42_RS06350 PF07152 YaeQ protein CJP42_RS06355 PF00472 RF-1 domain CJP42_RS06360 PF17185 NlpE C-terminal OB domain CJP42_RS06360 PF04170 NlpE N-terminal domain CJP42_RS06375 PF04073 Aminoacyl-tRNA editing domain CJP42_RS06375 PF03129 Anticodon binding domain CJP42_RS06375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJP42_RS06380 PF01980 tRNA-methyltransferase O CJP42_RS06380 PF18389 TrmO C-terminal domain CJP42_RS06385 PF16358 RcsF lipoprotein CJP42_RS06390 PF03180 NLPA lipoprotein CJP42_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS06400 PF00005 ABC transporter CJP42_RS06400 PF09383 NIL domain CJP42_RS06440 PF00083 Sugar (and other) transporter CJP42_RS06445 PF10043 Predicted periplasmic lipoprotein (DUF2279) CJP42_RS06450 PF13091 PLD-like domain CJP42_RS06455 PF13380 CoA binding domain CJP42_RS06455 PF00583 Acetyltransferase (GNAT) family CJP42_RS06455 PF13607 Succinyl-CoA ligase like flavodoxin domain CJP42_RS06460 PF03942 DTW domain CJP42_RS06465 PF00085 Thioredoxin CJP42_RS06470 PF00588 SpoU rRNA Methylase family CJP42_RS06470 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJP42_RS06475 PF03167 Uracil DNA glycosylase superfamily CJP42_RS06480 PF01228 Glycine radical CJP42_RS06485 PF01810 LysE type translocator CJP42_RS06495 PF00271 Helicase conserved C-terminal domain CJP42_RS06495 PF00270 DEAD/DEAH box helicase CJP42_RS06500 PF05175 Methyltransferase small domain CJP42_RS06505 PF00890 FAD binding domain CJP42_RS06505 PF02910 Fumarate reductase flavoprotein C-term CJP42_RS06515 PF04542 Sigma-70 region 2 CJP42_RS06515 PF08281 Sigma-70, region 4 CJP42_RS06520 PF03873 Anti sigma-E protein RseA, C-terminal domain CJP42_RS06520 PF03872 Anti sigma-E protein RseA, N-terminal domain CJP42_RS06525 PF17188 MucB/RseB C-terminal domain CJP42_RS06525 PF03888 MucB/RseB N-terminal domain CJP42_RS06540 PF06421 GTP-binding protein LepA C-terminus CJP42_RS06540 PF03144 Elongation factor Tu domain 2 CJP42_RS06540 PF00009 Elongation factor Tu GTP binding domain CJP42_RS06540 PF00679 Elongation factor G C-terminus CJP42_RS06545 PF10502 Signal peptidase, peptidase S26 CJP42_RS06555 PF00035 Double-stranded RNA binding motif CJP42_RS06555 PF14622 Ribonuclease-III-like CJP42_RS06560 PF01926 50S ribosome-binding GTPase CJP42_RS06560 PF07650 KH domain CJP42_RS06565 PF02565 Recombination protein O C terminal CJP42_RS06565 PF11967 Recombination protein O N terminal CJP42_RS06570 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CJP42_RS06575 PF01648 4'-phosphopantetheinyl transferase superfamily CJP42_RS06580 PF12838 4Fe-4S dicluster domain CJP42_RS06585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS06585 PF03466 LysR substrate binding domain CJP42_RS06590 PF07690 Major Facilitator Superfamily CJP42_RS06595 PF02558 Ketopantoate reductase PanE/ApbA CJP42_RS06595 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJP42_RS06600 PF01380 SIS domain CJP42_RS06600 PF01418 Helix-turn-helix domain, rpiR family CJP42_RS06605 PF01380 SIS domain CJP42_RS06610 PF02378 Phosphotransferase system, EIIC CJP42_RS06610 PF00367 phosphotransferase system, EIIB CJP42_RS06620 PF14437 MafB19-like deaminase CJP42_RS06625 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJP42_RS06625 PF01464 Transglycosylase SLT domain CJP42_RS06635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CJP42_RS06635 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CJP42_RS06635 PF02769 AIR synthase related protein, C-terminal domain CJP42_RS06640 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS06645 PF13942 YfhG lipoprotein CJP42_RS06650 PF00072 Response regulator receiver domain CJP42_RS06650 PF00158 Sigma-54 interaction domain CJP42_RS06655 PF00543 Nitrogen regulatory protein P-II CJP42_RS06660 PF00854 POT family CJP42_RS06665 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CJP42_RS06665 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CJP42_RS06665 PF01276 Orn/Lys/Arg decarboxylase, major domain CJP42_RS06670 PF13520 Amino acid permease CJP42_RS06675 PF18500 CadC C-terminal domain 1 CJP42_RS06675 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS06680 PF00970 Oxidoreductase FAD-binding domain CJP42_RS06680 PF00175 Oxidoreductase NAD-binding domain CJP42_RS06680 PF00042 Globin CJP42_RS06685 PF00464 Serine hydroxymethyltransferase CJP42_RS06690 PF12832 MFS_1 like family CJP42_RS06695 PF00874 PRD domain CJP42_RS06710 PF13187 4Fe-4S dicluster domain CJP42_RS06710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJP42_RS06710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJP42_RS06715 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CJP42_RS06715 PF00175 Oxidoreductase NAD-binding domain CJP42_RS06720 PF17179 4Fe-4S dicluster domain CJP42_RS06725 PF12146 Serine aminopeptidase, S33 CJP42_RS06730 PF00459 Inositol monophosphatase family CJP42_RS06735 PF00588 SpoU rRNA Methylase family CJP42_RS06740 PF02082 Transcriptional regulator CJP42_RS06745 PF00266 Aminotransferase class-V CJP42_RS06750 PF01592 NifU-like N terminal domain CJP42_RS06755 PF01521 Iron-sulphur cluster biosynthesis CJP42_RS06760 PF07743 HSCB C-terminal oligomerisation domain CJP42_RS06765 PF00012 Hsp70 protein CJP42_RS06770 PF00111 2Fe-2S iron-sulfur cluster binding domain CJP42_RS06775 PF04384 Iron-sulphur cluster assembly CJP42_RS06780 PF12404 Peptidase CJP42_RS06780 PF00883 Cytosol aminopeptidase family, catalytic domain CJP42_RS06790 PF07179 SseB protein N-terminal domain CJP42_RS06790 PF14581 SseB protein C-terminal domain CJP42_RS06810 PF00581 Rhodanese-like domain CJP42_RS06815 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CJP42_RS06815 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CJP42_RS06815 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CJP42_RS06815 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CJP42_RS06815 PF07703 Alpha-2-macroglobulin bait region domain CJP42_RS06815 PF00207 Alpha-2-macroglobulin family CJP42_RS06815 PF01835 MG2 domain CJP42_RS06815 PF17962 Bacterial macroglobulin domain 6 CJP42_RS06815 PF07678 A-macroglobulin TED domain CJP42_RS06820 PF00905 Penicillin binding protein transpeptidase domain CJP42_RS06820 PF00912 Transglycosylase CJP42_RS06820 PF06832 Penicillin-Binding Protein C-terminus Family CJP42_RS06830 PF13247 4Fe-4S dicluster domain CJP42_RS06830 PF12800 4Fe-4S binding domain CJP42_RS06845 PF00334 Nucleoside diphosphate kinase CJP42_RS06850 PF04055 Radical SAM superfamily CJP42_RS06860 PF13464 Domain of unknown function (DUF4115) CJP42_RS06865 PF04551 GcpE protein CJP42_RS06870 PF03129 Anticodon binding domain CJP42_RS06870 PF13393 Histidyl-tRNA synthetase CJP42_RS06875 PF09976 Tetratricopeptide repeat-like domain CJP42_RS06880 PF13360 PQQ-like domain CJP42_RS06885 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CJP42_RS06885 PF01926 50S ribosome-binding GTPase CJP42_RS06890 PF07191 zinc-ribbons CJP42_RS06925 PF13742 OB-fold nucleic acid binding domain CJP42_RS06925 PF02601 Exonuclease VII, large subunit CJP42_RS06930 PF00478 IMP dehydrogenase / GMP reductase domain CJP42_RS06930 PF00571 CBS domain CJP42_RS06935 PF00958 GMP synthase C terminal domain CJP42_RS06935 PF00117 Glutamine amidotransferase class-I CJP42_RS06935 PF02540 NAD synthase CJP42_RS06945 PF17358 Family of unknown function (DUF5384) CJP42_RS06950 PF05433 Glycine zipper 2TM domain CJP42_RS06955 PF11119 Protein of unknown function (DUF2633) CJP42_RS06965 PF00563 EAL domain CJP42_RS06965 PF05231 MASE1 CJP42_RS06970 PF02541 Ppx/GppA phosphatase family CJP42_RS06975 PF17941 Polyphosphate kinase C-terminal domain 1 CJP42_RS06975 PF13090 Polyphosphate kinase C-terminal domain 2 CJP42_RS06975 PF13089 Polyphosphate kinase N-terminal domain CJP42_RS06975 PF02503 Polyphosphate kinase middle domain CJP42_RS06980 PF00551 Formyl transferase CJP42_RS06985 PF02769 AIR synthase related protein, C-terminal domain CJP42_RS06985 PF00586 AIR synthase related protein, N-terminal domain CJP42_RS06995 PF00860 Permease family CJP42_RS07000 PF00308 Bacterial dnaA protein CJP42_RS07005 PF03960 ArsC family CJP42_RS07010 PF01435 Peptidase family M48 CJP42_RS07015 PF01594 AI-2E family transporter CJP42_RS07025 PF02447 GntP family permease CJP42_RS07030 PF02595 Glycerate kinase family CJP42_RS07035 PF00578 AhpC/TSA family CJP42_RS07040 PF01842 ACT domain CJP42_RS07045 PF00701 Dihydrodipicolinate synthetase family CJP42_RS07050 PF06804 NlpB/DapX lipoprotein CJP42_RS07055 PF01259 SAICAR synthetase CJP42_RS07060 PF04228 Putative neutral zinc metallopeptidase CJP42_RS07065 PF05127 Helicase CJP42_RS07065 PF08351 Domain of unknown function (DUF1726) CJP42_RS07065 PF17176 tRNA-binding domain CJP42_RS07065 PF13718 GNAT acetyltransferase 2 CJP42_RS07070 PF13980 Uncharacterised protein family (UPF0370) CJP42_RS07075 PF01546 Peptidase family M20/M25/M40 CJP42_RS07075 PF07687 Peptidase dimerisation domain CJP42_RS07080 PF03960 ArsC family CJP42_RS07085 PF00873 AcrB/AcrD/AcrF family CJP42_RS07090 PF00672 HAMP domain CJP42_RS07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS07090 PF07730 Histidine kinase CJP42_RS07090 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CJP42_RS07100 PF13247 4Fe-4S dicluster domain CJP42_RS07100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS07100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJP42_RS07110 PF00144 Beta-lactamase CJP42_RS07115 PF00293 NUDIX domain CJP42_RS07120 PF06674 Protein of unknown function (DUF1176) CJP42_RS07130 PF02779 Transketolase, pyrimidine binding domain CJP42_RS07130 PF00456 Transketolase, thiamine diphosphate binding domain CJP42_RS07130 PF02780 Transketolase, C-terminal domain CJP42_RS07135 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJP42_RS07145 PF00390 Malic enzyme, N-terminal domain CJP42_RS07145 PF03949 Malic enzyme, NAD binding domain CJP42_RS07145 PF01515 Phosphate acetyl/butaryl transferase CJP42_RS07155 PF01797 Transposase IS200 like CJP42_RS07160 PF00936 BMC domain CJP42_RS07165 PF10662 Ethanolamine utilisation - propanediol utilisation CJP42_RS07170 PF06249 Ethanolamine utilisation protein EutQ CJP42_RS07175 PF01923 Cobalamin adenosyltransferase CJP42_RS07180 PF01515 Phosphate acetyl/butaryl transferase CJP42_RS07190 PF03319 Ethanolamine utilisation protein EutN/carboxysome CJP42_RS07195 PF00171 Aldehyde dehydrogenase family CJP42_RS07205 PF00465 Iron-containing alcohol dehydrogenase CJP42_RS07210 PF04346 Ethanolamine utilisation protein, EutH CJP42_RS07215 PF06277 Ethanolamine utilisation protein EutA CJP42_RS07220 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CJP42_RS07225 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CJP42_RS07230 PF00936 BMC domain CJP42_RS07235 PF16365 Ethanolamine utilization protein EutK C-terminus CJP42_RS07235 PF00936 BMC domain CJP42_RS07240 PF12833 Helix-turn-helix domain CJP42_RS07245 PF09234 Domain of unknown function (DUF1963) CJP42_RS07255 PF01218 Coproporphyrinogen III oxidase CJP42_RS07260 PF01520 N-acetylmuramoyl-L-alanine amidase CJP42_RS07265 PF00583 Acetyltransferase (GNAT) family CJP42_RS07270 PF11143 Protein of unknown function (DUF2919) CJP42_RS07275 PF06572 Protein of unknown function (DUF1131) CJP42_RS07280 PF04261 Dyp-type peroxidase family CJP42_RS07295 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS07300 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS07305 PF00005 ABC transporter CJP42_RS07310 PF00291 Pyridoxal-phosphate dependent enzyme CJP42_RS07315 PF17263 Family of unknown function (DUF5329) CJP42_RS07320 PF00117 Glutamine amidotransferase class-I CJP42_RS07325 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS07325 PF00155 Aminotransferase class I and II CJP42_RS07330 PF08543 Phosphomethylpyrimidine kinase CJP42_RS07340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CJP42_RS07345 PF05524 PEP-utilising enzyme, N-terminal CJP42_RS07345 PF00391 PEP-utilising enzyme, mobile domain CJP42_RS07345 PF02896 PEP-utilising enzyme, TIM barrel domain CJP42_RS07350 PF00381 PTS HPr component phosphorylation site CJP42_RS07355 PF00291 Pyridoxal-phosphate dependent enzyme CJP42_RS07365 PF04354 ZipA, C-terminal FtsZ-binding domain CJP42_RS07370 PF03120 NAD-dependent DNA ligase OB-fold domain CJP42_RS07370 PF01653 NAD-dependent DNA ligase adenylation domain CJP42_RS07370 PF00533 BRCA1 C Terminus (BRCT) domain CJP42_RS07370 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CJP42_RS07370 PF12826 Helix-hairpin-helix motif CJP42_RS07375 PF12843 Putative quorum-sensing-regulated virulence factor CJP42_RS07380 PF13593 SBF-like CPA transporter family (DUF4137) CJP42_RS07385 PF03466 LysR substrate binding domain CJP42_RS07385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS07390 PF03502 Nucleoside-specific channel-forming protein, Tsx CJP42_RS07395 PF01048 Phosphorylase superfamily CJP42_RS07400 PF03825 Nucleoside H+ symporter CJP42_RS07410 PF03466 LysR substrate binding domain CJP42_RS07410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS07435 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJP42_RS07440 PF07037 Putative transcription regulator (DUF1323) CJP42_RS07445 PF07037 Putative transcription regulator (DUF1323) CJP42_RS07460 PF00563 EAL domain CJP42_RS07460 PF05231 MASE1 CJP42_RS07465 PF01773 Na+ dependent nucleoside transporter N-terminus CJP42_RS07465 PF07670 Nucleoside recognition CJP42_RS07465 PF07662 Na+ dependent nucleoside transporter C-terminus CJP42_RS07470 PF01566 Natural resistance-associated macrophage protein CJP42_RS07475 PF10697 Protein of unknown function (DUF2502) CJP42_RS07480 PF00248 Aldo/keto reductase family CJP42_RS07490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJP42_RS07490 PF00205 Thiamine pyrophosphate enzyme, central domain CJP42_RS07490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJP42_RS07495 PF00654 Voltage gated chloride channel CJP42_RS07500 PF02685 Glucokinase CJP42_RS07510 PF00155 Aminotransferase class I and II CJP42_RS07520 PF01797 Transposase IS200 like CJP42_RS07530 PF03279 Bacterial lipid A biosynthesis acyltransferase CJP42_RS07535 PF10810 Protein of unknown function (DUF2545) CJP42_RS07540 PF07690 Major Facilitator Superfamily CJP42_RS07555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS07555 PF00672 HAMP domain CJP42_RS07555 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS07560 PF02954 Bacterial regulatory protein, Fis family CJP42_RS07560 PF00072 Response regulator receiver domain CJP42_RS07560 PF14532 Sigma-54 interaction domain CJP42_RS07565 PF01278 Omptin family CJP42_RS07585 PF01757 Acyltransferase family CJP42_RS07590 PF00535 Glycosyl transferase family 2 CJP42_RS07595 PF04138 GtrA-like protein CJP42_RS07615 PF01226 Formate/nitrite transporter CJP42_RS07620 PF04333 MlaA lipoprotein CJP42_RS07625 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CJP42_RS07630 PF04175 Protein of unknown function (DUF406) CJP42_RS07635 PF02803 Thiolase, C-terminal domain CJP42_RS07635 PF00108 Thiolase, N-terminal domain CJP42_RS07640 PF00378 Enoyl-CoA hydratase/isomerase CJP42_RS07640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJP42_RS07640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJP42_RS07645 PF00300 Histidine phosphatase superfamily (branch 1) CJP42_RS07650 PF01713 Smr domain CJP42_RS07655 PF05175 Methyltransferase small domain CJP42_RS07660 PF01264 Chorismate synthase CJP42_RS07665 PF03411 Penicillin-insensitive murein endopeptidase CJP42_RS07670 PF01925 Sulfite exporter TauE/SafE CJP42_RS07680 PF08891 YfcL protein CJP42_RS07685 PF01266 FAD dependent oxidoreductase CJP42_RS07685 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CJP42_RS07690 PF00109 Beta-ketoacyl synthase, N-terminal domain CJP42_RS07690 PF02801 Beta-ketoacyl synthase, C-terminal domain CJP42_RS07695 PF02517 CPBP intramembrane metalloprotease CJP42_RS07710 PF13693 Winged helix-turn-helix DNA-binding CJP42_RS07720 PF07690 Major Facilitator Superfamily CJP42_RS07730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJP42_RS07730 PF11890 Domain of unknown function (DUF3410) CJP42_RS07730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJP42_RS07735 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJP42_RS07735 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJP42_RS07740 PF01416 tRNA pseudouridine synthase CJP42_RS07745 PF09335 SNARE associated Golgi protein CJP42_RS07750 PF01039 Carboxyl transferase domain CJP42_RS07750 PF17848 Acetyl-coA carboxylase zinc finger domain CJP42_RS07755 PF02875 Mur ligase family, glutamate ligase domain CJP42_RS07755 PF08245 Mur ligase middle domain CJP42_RS07760 PF05036 Sporulation related domain CJP42_RS07765 PF02674 Colicin V production protein CJP42_RS07770 PF00156 Phosphoribosyl transferase domain CJP42_RS07775 PF13426 PAS domain CJP42_RS07775 PF00158 Sigma-54 interaction domain CJP42_RS07775 PF02954 Bacterial regulatory protein, Fis family CJP42_RS07780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJP42_RS07780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJP42_RS07785 PF13520 Amino acid permease CJP42_RS07790 PF01168 Alanine racemase, N-terminal domain CJP42_RS07795 PF00324 Amino acid permease CJP42_RS07800 PF02441 Flavoprotein CJP42_RS07810 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJP42_RS07815 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJP42_RS07820 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS07825 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS07830 PF00005 ABC transporter CJP42_RS07835 PF08338 Domain of unknown function (DUF1731) CJP42_RS07835 PF01370 NAD dependent epimerase/dehydratase family CJP42_RS07840 PF00043 Glutathione S-transferase, C-terminal domain CJP42_RS07840 PF02798 Glutathione S-transferase, N-terminal domain CJP42_RS07845 PF02798 Glutathione S-transferase, N-terminal domain CJP42_RS07845 PF14834 Glutathione S-transferase, C-terminal domain CJP42_RS07850 PF12850 Calcineurin-like phosphoesterase superfamily domain CJP42_RS07855 PF00293 NUDIX domain CJP42_RS07860 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS07870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJP42_RS07880 PF03611 PTS system sugar-specific permease component CJP42_RS07885 PF00456 Transketolase, thiamine diphosphate binding domain CJP42_RS07890 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJP42_RS07890 PF02780 Transketolase, C-terminal domain CJP42_RS07890 PF02779 Transketolase, pyrimidine binding domain CJP42_RS07895 PF03606 C4-dicarboxylate anaerobic carrier CJP42_RS07900 PF01515 Phosphate acetyl/butaryl transferase CJP42_RS07900 PF07085 DRTGG domain CJP42_RS07905 PF00871 Acetokinase family CJP42_RS07910 PF04217 Protein of unknown function, DUF412 CJP42_RS07915 PF03887 YfbU domain CJP42_RS07920 PF13419 Haloacid dehalogenase-like hydrolase CJP42_RS07925 PF02080 TrkA-C domain CJP42_RS07925 PF03600 Citrate transporter CJP42_RS07940 PF00155 Aminotransferase class I and II CJP42_RS07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS07950 PF03466 LysR substrate binding domain CJP42_RS07960 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CJP42_RS07965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJP42_RS07970 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJP42_RS07970 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJP42_RS07980 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJP42_RS07980 PF10531 SLBB domain CJP42_RS07980 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJP42_RS07985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJP42_RS07985 PF01568 Molydopterin dinucleotide binding domain CJP42_RS07985 PF00384 Molybdopterin oxidoreductase CJP42_RS07985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJP42_RS07990 PF00146 NADH dehydrogenase CJP42_RS07995 PF12838 4Fe-4S dicluster domain CJP42_RS08000 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CJP42_RS08005 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJP42_RS08010 PF00361 Proton-conducting membrane transporter CJP42_RS08010 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJP42_RS08020 PF00361 Proton-conducting membrane transporter CJP42_RS08025 PF00361 Proton-conducting membrane transporter CJP42_RS08030 PF00072 Response regulator receiver domain CJP42_RS08030 PF01584 CheW-like domain CJP42_RS08035 PF12706 Beta-lactamase superfamily domain CJP42_RS08040 PF13673 Acetyltransferase (GNAT) domain CJP42_RS08045 PF05957 Bacterial protein of unknown function (DUF883) CJP42_RS08050 PF00425 chorismate binding enzyme CJP42_RS08055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJP42_RS08055 PF16582 Middle domain of thiamine pyrophosphate CJP42_RS08055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJP42_RS08060 PF12697 Alpha/beta hydrolase family CJP42_RS08065 PF00378 Enoyl-CoA hydratase/isomerase CJP42_RS08070 PF13378 Enolase C-terminal domain-like CJP42_RS08075 PF13193 AMP-binding enzyme C-terminal domain CJP42_RS08075 PF00501 AMP-binding enzyme CJP42_RS08090 PF00892 EamA-like transporter family CJP42_RS08095 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CJP42_RS08100 PF01522 Polysaccharide deacetylase CJP42_RS08105 PF01370 NAD dependent epimerase/dehydratase family CJP42_RS08105 PF02911 Formyl transferase, C-terminal domain CJP42_RS08105 PF00551 Formyl transferase CJP42_RS08110 PF00535 Glycosyl transferase family 2 CJP42_RS08115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJP42_RS08120 PF00300 Histidine phosphatase superfamily (branch 1) CJP42_RS08125 PF00293 NUDIX domain CJP42_RS08130 PF07437 YfaZ precursor CJP42_RS08135 PF00994 Probable molybdopterin binding domain CJP42_RS08140 PF01614 Bacterial transcriptional regulator CJP42_RS08140 PF09339 IclR helix-turn-helix domain CJP42_RS08145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJP42_RS08145 PF13378 Enolase C-terminal domain-like CJP42_RS08150 PF07690 Major Facilitator Superfamily CJP42_RS08155 PF03328 HpcH/HpaI aldolase/citrate lyase family CJP42_RS08160 PF00994 Probable molybdopterin binding domain CJP42_RS08175 PF13183 4Fe-4S dicluster domain CJP42_RS08175 PF02754 Cysteine-rich domain CJP42_RS08180 PF00890 FAD binding domain CJP42_RS08185 PF01266 FAD dependent oxidoreductase CJP42_RS08185 PF04324 BFD-like [2Fe-2S] binding domain CJP42_RS08190 PF07690 Major Facilitator Superfamily CJP42_RS08195 PF03009 Glycerophosphoryl diester phosphodiesterase family CJP42_RS08200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS08200 PF03466 LysR substrate binding domain CJP42_RS08205 PF07690 Major Facilitator Superfamily CJP42_RS08210 PF00111 2Fe-2S iron-sulfur cluster binding domain CJP42_RS08215 PF00268 Ribonucleotide reductase, small chain CJP42_RS08220 PF00317 Ribonucleotide reductase, all-alpha domain CJP42_RS08220 PF03477 ATP cone domain CJP42_RS08220 PF02867 Ribonucleotide reductase, barrel domain CJP42_RS08240 PF13378 Enolase C-terminal domain-like CJP42_RS08240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJP42_RS08250 PF03989 DNA gyrase C-terminal domain, beta-propeller CJP42_RS08250 PF00521 DNA gyrase/topoisomerase IV, subunit A CJP42_RS08265 PF09456 RcsC Alpha-Beta-Loop (ABL) CJP42_RS08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS08265 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS08265 PF00072 Response regulator receiver domain CJP42_RS08270 PF00072 Response regulator receiver domain CJP42_RS08270 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS08275 PF01627 Hpt domain CJP42_RS08275 PF16359 RcsD-ABL domain CJP42_RS08280 PF00267 Gram-negative porin CJP42_RS08285 PF02424 ApbE family CJP42_RS08290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJP42_RS08290 PF12833 Helix-turn-helix domain CJP42_RS08290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJP42_RS08290 PF02805 Metal binding domain of Ada CJP42_RS08295 PF13532 2OG-Fe(II) oxygenase superfamily CJP42_RS08300 PF00005 ABC transporter CJP42_RS08305 PF03974 Ecotin CJP42_RS08310 PF00037 4Fe-4S binding domain CJP42_RS08310 PF12800 4Fe-4S binding domain CJP42_RS08310 PF13187 4Fe-4S dicluster domain CJP42_RS08315 PF03927 NapD protein CJP42_RS08320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJP42_RS08320 PF01568 Molydopterin dinucleotide binding domain CJP42_RS08320 PF00384 Molybdopterin oxidoreductase CJP42_RS08330 PF12801 4Fe-4S binding domain CJP42_RS08330 PF13237 4Fe-4S dicluster domain CJP42_RS08340 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CJP42_RS08345 PF03264 NapC/NirT cytochrome c family, N-terminal region CJP42_RS08350 PF00005 ABC transporter CJP42_RS08355 PF03379 CcmB protein CJP42_RS08360 PF01578 Cytochrome C assembly protein CJP42_RS08365 PF04995 Heme exporter protein D (CcmD) CJP42_RS08370 PF03100 CcmE CJP42_RS08375 PF01578 Cytochrome C assembly protein CJP42_RS08375 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CJP42_RS08380 PF08534 Redoxin CJP42_RS08385 PF03918 Cytochrome C biogenesis protein CJP42_RS08390 PF00072 Response regulator receiver domain CJP42_RS08390 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS08410 PF08400 Prophage tail fibre N-terminal CJP42_RS08410 PF07484 Phage Tail Collar Domain CJP42_RS08410 PF03335 Phage tail fibre repeat CJP42_RS08420 PF12468 Type III secretion system leucine rich repeat protein CJP42_RS08420 PF14496 C-terminal novel E3 ligase, LRR-interacting CJP42_RS08435 PF11893 Domain of unknown function (DUF3413) CJP42_RS08435 PF00884 Sulfatase CJP42_RS08440 PF07208 Protein of unknown function (DUF1414) CJP42_RS08445 PF04245 37-kD nucleoid-associated bacterial protein CJP42_RS08455 PF01386 Ribosomal L25p family CJP42_RS08460 PF04851 Type III restriction enzyme, res subunit CJP42_RS08460 PF00271 Helicase conserved C-terminal domain CJP42_RS08465 PF00849 RNA pseudouridylate synthase CJP42_RS08465 PF01479 S4 domain CJP42_RS08470 PF07690 Major Facilitator Superfamily CJP42_RS08480 PF13989 YejG-like protein CJP42_RS08485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJP42_RS08485 PF00005 ABC transporter CJP42_RS08490 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS08490 PF12911 N-terminal TM domain of oligopeptide transport permease C CJP42_RS08495 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS08500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJP42_RS08505 PF12792 CSS motif domain associated with EAL CJP42_RS08505 PF00563 EAL domain CJP42_RS08515 PF00877 NlpC/P60 family CJP42_RS08525 PF01569 PAP2 superfamily CJP42_RS08530 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJP42_RS08530 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJP42_RS08535 PF09285 Elongation factor P, C-terminal CJP42_RS08535 PF08207 Elongation factor P (EF-P) KOW-like domain CJP42_RS08535 PF01132 Elongation factor P (EF-P) OB domain CJP42_RS08545 PF03692 Putative zinc- or iron-chelating domain CJP42_RS08560 PF07690 Major Facilitator Superfamily CJP42_RS08565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJP42_RS08565 PF00381 PTS HPr component phosphorylation site CJP42_RS08570 PF00294 pfkB family carbohydrate kinase CJP42_RS08575 PF02378 Phosphotransferase system, EIIC CJP42_RS08575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJP42_RS08580 PF01261 Xylose isomerase-like TIM barrel CJP42_RS08585 PF03601 Conserved hypothetical protein 698 CJP42_RS08590 PF03466 LysR substrate binding domain CJP42_RS08590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS08595 PF00324 Amino acid permease CJP42_RS08605 PF07715 TonB-dependent Receptor Plug Domain CJP42_RS08605 PF00593 TonB dependent receptor CJP42_RS08615 PF18429 Domain of unknown function (DUF5609) CJP42_RS08620 PF03313 Serine dehydratase alpha chain CJP42_RS08620 PF03315 Serine dehydratase beta chain CJP42_RS08630 PF00756 Putative esterase CJP42_RS08640 PF01227 GTP cyclohydrolase I CJP42_RS08645 PF04235 Protein of unknown function (DUF418) CJP42_RS08650 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS08655 PF13407 Periplasmic binding protein domain CJP42_RS08665 PF02653 Branched-chain amino acid transport system / permease component CJP42_RS08675 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJP42_RS08675 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS08680 PF10808 Protein of unknown function (DUF2542) CJP42_RS08685 PF02698 DUF218 domain CJP42_RS08690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJP42_RS08690 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CJP42_RS08695 PF04172 LrgB-like family CJP42_RS08700 PF03788 LrgA family CJP42_RS08705 PF03466 LysR substrate binding domain CJP42_RS08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS08710 PF07690 Major Facilitator Superfamily CJP42_RS08715 PF07883 Cupin domain CJP42_RS08720 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJP42_RS08725 PF14497 Glutathione S-transferase, C-terminal domain CJP42_RS08725 PF02798 Glutathione S-transferase, N-terminal domain CJP42_RS08730 PF01494 FAD binding domain CJP42_RS08735 PF01207 Dihydrouridine synthase (Dus) CJP42_RS08755 PF09335 SNARE associated Golgi protein CJP42_RS08760 PF04893 Yip1 domain CJP42_RS08770 PF00768 D-alanyl-D-alanine carboxypeptidase CJP42_RS08775 PF09330 D-lactate dehydrogenase, membrane binding CJP42_RS08775 PF01565 FAD binding domain CJP42_RS08780 PF01915 Glycosyl hydrolase family 3 C-terminal domain CJP42_RS08780 PF14310 Fibronectin type III-like domain CJP42_RS08780 PF00933 Glycosyl hydrolase family 3 N terminal domain CJP42_RS08785 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CJP42_RS08790 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS08795 PF00005 ABC transporter CJP42_RS08800 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS08810 PF13411 MerR HTH family regulatory protein CJP42_RS08815 PF06580 Histidine kinase CJP42_RS08815 PF07694 5TMR of 5TMR-LYT CJP42_RS08820 PF00072 Response regulator receiver domain CJP42_RS08820 PF04397 LytTr DNA-binding domain CJP42_RS08825 PF07308 Protein of unknown function (DUF1456) CJP42_RS08835 PF06998 Protein of unknown function (DUF1307) CJP42_RS08840 PF09334 tRNA synthetases class I (M) CJP42_RS08840 PF01588 Putative tRNA binding domain CJP42_RS08845 PF10609 NUBPL iron-transfer P-loop NTPase CJP42_RS08860 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS08860 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS08865 PF13954 PapC N-terminal domain CJP42_RS08865 PF00577 Outer membrane usher protein CJP42_RS08865 PF13953 PapC C-terminal domain CJP42_RS08870 PF00419 Fimbrial protein CJP42_RS08875 PF11776 Nickel/cobalt transporter regulator CJP42_RS08880 PF02110 Hydroxyethylthiazole kinase family CJP42_RS08885 PF08543 Phosphomethylpyrimidine kinase CJP42_RS08890 PF07702 UTRA domain CJP42_RS08890 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS08895 PF00294 pfkB family carbohydrate kinase CJP42_RS08900 PF03747 ADP-ribosylglycohydrolase CJP42_RS08905 PF03825 Nucleoside H+ symporter CJP42_RS08910 PF01791 DeoC/LacD family aldolase CJP42_RS08915 PF00781 Diacylglycerol kinase catalytic domain CJP42_RS08925 PF05932 Tir chaperone protein (CesT) family CJP42_RS08935 PF01136 Peptidase family U32 CJP42_RS08935 PF16325 Peptidase family U32 C-terminal domain CJP42_RS08965 PF07262 CDI immunity protein CJP42_RS09030 PF00072 Response regulator receiver domain CJP42_RS09030 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS09035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS09035 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS09035 PF00672 HAMP domain CJP42_RS09040 PF07690 Major Facilitator Superfamily CJP42_RS09045 PF00873 AcrB/AcrD/AcrF family CJP42_RS09050 PF00873 AcrB/AcrD/AcrF family CJP42_RS09055 PF13533 Biotin-lipoyl like CJP42_RS09065 PF00012 Hsp70 protein CJP42_RS09075 PF00730 HhH-GPD superfamily base excision DNA repair protein CJP42_RS09075 PF06029 AlkA N-terminal domain CJP42_RS09080 PF13426 PAS domain CJP42_RS09080 PF00563 EAL domain CJP42_RS09080 PF08448 PAS fold CJP42_RS09080 PF00990 Diguanylate cyclase, GGDEF domain CJP42_RS09080 PF08447 PAS fold CJP42_RS09080 PF05231 MASE1 CJP42_RS09085 PF00485 Phosphoribulokinase / Uridine kinase family CJP42_RS09090 PF00692 dUTPase CJP42_RS09095 PF05170 AsmA family CJP42_RS09100 PF03471 Transporter associated domain CJP42_RS09100 PF03741 Integral membrane protein TerC family CJP42_RS09100 PF00571 CBS domain CJP42_RS09110 PF10531 SLBB domain CJP42_RS09110 PF02563 Polysaccharide biosynthesis/export protein CJP42_RS09110 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CJP42_RS09115 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJP42_RS09120 PF02706 Chain length determinant protein CJP42_RS09120 PF13807 G-rich domain on putative tyrosine kinase CJP42_RS09120 PF13614 AAA domain CJP42_RS09125 PF00535 Glycosyl transferase family 2 CJP42_RS09130 PF00132 Bacterial transferase hexapeptide (six repeats) CJP42_RS09135 PF13439 Glycosyltransferase Family 4 CJP42_RS09135 PF00534 Glycosyl transferases group 1 CJP42_RS09145 PF00535 Glycosyl transferase family 2 CJP42_RS09150 PF00132 Bacterial transferase hexapeptide (six repeats) CJP42_RS09155 PF16363 GDP-mannose 4,6 dehydratase CJP42_RS09160 PF01370 NAD dependent epimerase/dehydratase family CJP42_RS09165 PF00293 NUDIX domain CJP42_RS09170 PF13579 Glycosyl transferase 4-like domain CJP42_RS09170 PF00534 Glycosyl transferases group 1 CJP42_RS09175 PF00483 Nucleotidyl transferase CJP42_RS09175 PF01050 Mannose-6-phosphate isomerase CJP42_RS09180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJP42_RS09180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJP42_RS09180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJP42_RS09180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJP42_RS09185 PF02397 Bacterial sugar transferase CJP42_RS09200 PF00534 Glycosyl transferases group 1 CJP42_RS09200 PF13439 Glycosyltransferase Family 4 CJP42_RS09210 PF00483 Nucleotidyl transferase CJP42_RS09215 PF16363 GDP-mannose 4,6 dehydratase CJP42_RS09220 PF04321 RmlD substrate binding domain CJP42_RS09225 PF00483 Nucleotidyl transferase CJP42_RS09230 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CJP42_RS09235 PF00175 Oxidoreductase NAD-binding domain CJP42_RS09235 PF00111 2Fe-2S iron-sulfur cluster binding domain CJP42_RS09235 PF00970 Oxidoreductase FAD-binding domain CJP42_RS09240 PF00483 Nucleotidyl transferase CJP42_RS09245 PF16363 GDP-mannose 4,6 dehydratase CJP42_RS09250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJP42_RS09255 PF01370 NAD dependent epimerase/dehydratase family CJP42_RS09260 PF16363 GDP-mannose 4,6 dehydratase CJP42_RS09270 PF00535 Glycosyl transferase family 2 CJP42_RS09275 PF00534 Glycosyl transferases group 1 CJP42_RS09275 PF13439 Glycosyltransferase Family 4 CJP42_RS09280 PF00535 Glycosyl transferase family 2 CJP42_RS09285 PF00483 Nucleotidyl transferase CJP42_RS09285 PF01050 Mannose-6-phosphate isomerase CJP42_RS09290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJP42_RS09290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJP42_RS09290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJP42_RS09290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJP42_RS09295 PF02397 Bacterial sugar transferase CJP42_RS09300 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CJP42_RS09300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJP42_RS09310 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJP42_RS09310 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJP42_RS09315 PF02706 Chain length determinant protein CJP42_RS09320 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CJP42_RS09320 PF01502 Phosphoribosyl-AMP cyclohydrolase CJP42_RS09325 PF00977 Histidine biosynthesis protein CJP42_RS09330 PF00977 Histidine biosynthesis protein CJP42_RS09335 PF00117 Glutamine amidotransferase class-I CJP42_RS09340 PF00475 Imidazoleglycerol-phosphate dehydratase CJP42_RS09345 PF00155 Aminotransferase class I and II CJP42_RS09350 PF00815 Histidinol dehydrogenase CJP42_RS09355 PF01634 ATP phosphoribosyltransferase CJP42_RS09355 PF08029 HisG, C-terminal domain CJP42_RS09365 PF01370 NAD dependent epimerase/dehydratase family CJP42_RS09370 PF03466 LysR substrate binding domain CJP42_RS09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS09380 PF13520 Amino acid permease CJP42_RS09385 PF00929 Exonuclease CJP42_RS09385 PF08411 Exonuclease C-terminal CJP42_RS09405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJP42_RS09405 PF01568 Molydopterin dinucleotide binding domain CJP42_RS09405 PF00384 Molybdopterin oxidoreductase CJP42_RS09410 PF13247 4Fe-4S dicluster domain CJP42_RS09410 PF12800 4Fe-4S binding domain CJP42_RS09415 PF01292 Prokaryotic cytochrome b561 CJP42_RS09425 PF06445 GyrI-like small molecule binding domain CJP42_RS09430 PF04632 Fusaric acid resistance protein family CJP42_RS09435 PF04363 Protein of unknown function (DUF496) CJP42_RS09440 PF00288 GHMP kinases N terminal domain CJP42_RS09445 PF00871 Acetokinase family CJP42_RS09450 PF10662 Ethanolamine utilisation - propanediol utilisation CJP42_RS09455 PF00936 BMC domain CJP42_RS09465 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJP42_RS09465 PF13237 4Fe-4S dicluster domain CJP42_RS09465 PF13375 RnfC Barrel sandwich hybrid domain CJP42_RS09465 PF10531 SLBB domain CJP42_RS09470 PF00465 Iron-containing alcohol dehydrogenase CJP42_RS09470 PF00171 Aldehyde dehydrogenase family CJP42_RS09475 PF00171 Aldehyde dehydrogenase family CJP42_RS09480 PF01923 Cobalamin adenosyltransferase CJP42_RS09495 PF06130 Phosphate propanoyltransferase CJP42_RS09500 PF00936 BMC domain CJP42_RS09505 PF00936 BMC domain CJP42_RS09515 PF08841 Diol dehydratase reactivase ATPase-like domain CJP42_RS09515 PF18427 DD-reactivating factor swiveling domain CJP42_RS09520 PF02287 Dehydratase small subunit CJP42_RS09525 PF02288 Dehydratase medium subunit CJP42_RS09530 PF02286 Dehydratase large subunit CJP42_RS09535 PF00936 BMC domain CJP42_RS09540 PF00936 BMC domain CJP42_RS09545 PF00230 Major intrinsic protein CJP42_RS09550 PF10114 Sensory domain found in PocR CJP42_RS09550 PF12833 Helix-turn-helix domain CJP42_RS09555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJP42_RS09555 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJP42_RS09560 PF03186 CobD/Cbib protein CJP42_RS09565 PF02570 Precorrin-8X methylmutase CJP42_RS09570 PF01888 CbiD CJP42_RS09575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJP42_RS09580 PF05175 Methyltransferase small domain CJP42_RS09585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJP42_RS09590 PF11760 Cobalamin synthesis G N-terminal CJP42_RS09590 PF11761 Cobalamin biosynthesis central region CJP42_RS09590 PF01890 Cobalamin synthesis G C-terminus CJP42_RS09595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJP42_RS09600 PF02571 Precorrin-6x reductase CbiJ/CobK CJP42_RS09605 PF06180 Cobalt chelatase (CbiK) CJP42_RS09610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJP42_RS09620 PF02553 Cobalt transport protein component CbiN CJP42_RS09625 PF02361 Cobalt transport protein CJP42_RS09630 PF00005 ABC transporter CJP42_RS09635 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJP42_RS09640 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CJP42_RS09645 PF02654 Cobalamin-5-phosphate synthase CJP42_RS09650 PF02277 Phosphoribosyltransferase CJP42_RS09655 PF03734 L,D-transpeptidase catalytic domain CJP42_RS09655 PF17969 L,D-transpeptidase C-terminal domain CJP42_RS09665 PF01554 MatE CJP42_RS09695 PF01048 Phosphorylase superfamily CJP42_RS09695 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CJP42_RS09710 PF05930 Prophage CP4-57 regulatory protein (AlpA) CJP42_RS09785 PF04851 Type III restriction enzyme, res subunit CJP42_RS09785 PF08774 VRR-NUC domain CJP42_RS09790 PF01555 DNA methylase CJP42_RS09790 PF18273 Type III R-M EcoP15I C-terminal domain CJP42_RS09800 PF13356 Arm DNA-binding domain CJP42_RS09800 PF00589 Phage integrase family CJP42_RS09815 PF06167 Glucose-regulated metallo-peptidase M90 CJP42_RS09835 PF00717 Peptidase S24-like CJP42_RS09840 PF11799 impB/mucB/samB family C-terminal domain CJP42_RS09840 PF00817 impB/mucB/samB family CJP42_RS09840 PF13438 Domain of unknown function (DUF4113) CJP42_RS09845 PF00313 'Cold-shock' DNA-binding domain CJP42_RS09855 PF00267 Gram-negative porin CJP42_RS09870 PF01966 HD domain CJP42_RS09875 PF18284 DNA methylase N-terminal domain CJP42_RS09875 PF00145 C-5 cytosine-specific DNA methylase CJP42_RS09880 PF03852 DNA mismatch endonuclease Vsr CJP42_RS09885 PF00892 EamA-like transporter family CJP42_RS09895 PF09926 Uncharacterized small protein (DUF2158) CJP42_RS09900 PF17151 Periplasmic sensor domain CJP42_RS09900 PF00990 Diguanylate cyclase, GGDEF domain CJP42_RS09910 PF10733 Protein of unknown function (DUF2525) CJP42_RS09915 PF10781 Dextransucrase DSRB CJP42_RS09920 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS09925 PF01311 Bacterial export proteins, family 1 CJP42_RS09930 PF01313 Bacterial export proteins, family 3 CJP42_RS09935 PF00813 FliP family CJP42_RS09940 PF04347 Flagellar biosynthesis protein, FliO CJP42_RS09945 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJP42_RS09945 PF16973 Flagellar motor switch protein FliN N-terminal CJP42_RS09950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJP42_RS09950 PF02154 Flagellar motor switch protein FliM CJP42_RS09955 PF03748 Flagellar basal body-associated protein FliL CJP42_RS09960 PF02120 Flagellar hook-length control protein FliK CJP42_RS09965 PF02050 Flagellar FliJ protein CJP42_RS09970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJP42_RS09970 PF18269 T3SS EscN ATPase C-terminal domain CJP42_RS09975 PF02108 Flagellar assembly protein FliH CJP42_RS09980 PF01706 FliG C-terminal domain CJP42_RS09980 PF14841 FliG middle domain CJP42_RS09980 PF14842 FliG N-terminal domain CJP42_RS09985 PF08345 Flagellar M-ring protein C-terminal CJP42_RS09985 PF01514 Secretory protein of YscJ/FliF family CJP42_RS09990 PF02049 Flagellar hook-basal body complex protein FliE CJP42_RS10000 PF01206 Sulfurtransferase TusA CJP42_RS10005 PF04143 Sulphur transport CJP42_RS10010 PF13987 YedD-like protein CJP42_RS10015 PF00128 Alpha amylase, catalytic domain CJP42_RS10015 PF02806 Alpha amylase, C-terminal all-beta domain CJP42_RS10020 PF05400 Flagellar protein FliT CJP42_RS10025 PF02561 Flagellar protein FliS CJP42_RS10030 PF02465 Flagellar hook-associated protein 2 N-terminus CJP42_RS10030 PF07196 Flagellin hook IN motif CJP42_RS10030 PF07195 Flagellar hook-associated protein 2 C-terminus CJP42_RS10035 PF00700 Bacterial flagellin C-terminal helical region CJP42_RS10035 PF08884 Flagellin D3 domain CJP42_RS10035 PF00669 Bacterial flagellin N-terminal helical region CJP42_RS10045 PF04539 Sigma-70 region 3 CJP42_RS10045 PF04542 Sigma-70 region 2 CJP42_RS10045 PF04545 Sigma-70, region 4 CJP42_RS10050 PF02899 Phage integrase, N-terminal SAM-like domain CJP42_RS10055 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJP42_RS10060 PF00291 Pyridoxal-phosphate dependent enzyme CJP42_RS10065 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS10070 PF00005 ABC transporter CJP42_RS10075 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS10075 PF03472 Autoinducer binding domain CJP42_RS10080 PF10769 Protein of unknown function (DUF2594) CJP42_RS10090 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS10090 PF00072 Response regulator receiver domain CJP42_RS10095 PF01541 GIY-YIG catalytic domain CJP42_RS10095 PF02151 UvrB/uvrC motif CJP42_RS10095 PF08459 UvrC Helix-hairpin-helix N-terminal CJP42_RS10100 PF01066 CDP-alcohol phosphatidyltransferase CJP42_RS10135 PF02810 SEC-C motif CJP42_RS10135 PF03695 Uncharacterised protein family (UPF0149) CJP42_RS10140 PF03222 Tryptophan/tyrosine permease family CJP42_RS10145 PF10678 Protein of unknown function (DUF2492) CJP42_RS10150 PF00210 Ferritin-like domain CJP42_RS10155 PF13992 YecR-like lipoprotein CJP42_RS10160 PF00210 Ferritin-like domain CJP42_RS10170 PF02653 Branched-chain amino acid transport system / permease component CJP42_RS10175 PF02358 Trehalose-phosphatase CJP42_RS10180 PF00982 Glycosyltransferase family 20 CJP42_RS10195 PF05247 Flagellar transcriptional activator (FlhD) CJP42_RS10200 PF05280 Flagellar transcriptional activator (FlhC) CJP42_RS10205 PF01618 MotA/TolQ/ExbB proton channel family CJP42_RS10210 PF13677 Membrane MotB of proton-channel complex MotA/MotB CJP42_RS10210 PF00691 OmpA family CJP42_RS10215 PF01627 Hpt domain CJP42_RS10215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS10215 PF09078 CheY binding CJP42_RS10215 PF01584 CheW-like domain CJP42_RS10215 PF02895 Signal transducing histidine kinase, homodimeric domain CJP42_RS10220 PF01584 CheW-like domain CJP42_RS10225 PF02203 Tar ligand binding domain homologue CJP42_RS10225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJP42_RS10225 PF00672 HAMP domain CJP42_RS10230 PF01739 CheR methyltransferase, SAM binding domain CJP42_RS10230 PF03705 CheR methyltransferase, all-alpha domain CJP42_RS10235 PF01339 CheB methylesterase CJP42_RS10235 PF00072 Response regulator receiver domain CJP42_RS10240 PF00072 Response regulator receiver domain CJP42_RS10245 PF04344 Chemotaxis phosphatase, CheZ CJP42_RS10250 PF01312 FlhB HrpN YscU SpaS Family CJP42_RS10255 PF00771 FHIPEP family CJP42_RS10260 PF06366 Flagellar protein FlhE CJP42_RS10265 PF07470 Glycosyl Hydrolase Family 88 CJP42_RS10275 PF00750 tRNA synthetases class I (R) CJP42_RS10275 PF05746 DALR anticodon binding domain CJP42_RS10275 PF03485 Arginyl tRNA synthetase N terminal domain CJP42_RS10280 PF06185 YecM protein CJP42_RS10285 PF03932 CutC family CJP42_RS10290 PF08003 Protein of unknown function (DUF1698) CJP42_RS10295 PF13649 Methyltransferase domain CJP42_RS10300 PF01124 MAPEG family CJP42_RS10305 PF01904 Protein of unknown function DUF72 CJP42_RS10310 PF00857 Isochorismatase family CJP42_RS10315 PF00152 tRNA synthetases class II (D, K and N) CJP42_RS10315 PF02938 GAD domain CJP42_RS10315 PF01336 OB-fold nucleic acid binding domain CJP42_RS10320 PF00293 NUDIX domain CJP42_RS10325 PF01709 Transcriptional regulator CJP42_RS10330 PF02075 Crossover junction endodeoxyribonuclease RuvC CJP42_RS10335 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CJP42_RS10345 PF07499 RuvA, C-terminal domain CJP42_RS10345 PF01330 RuvA N terminal domain CJP42_RS10350 PF17864 RuvB AAA lid domain CJP42_RS10350 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJP42_RS10350 PF05491 RuvB C-terminal winged helix domain CJP42_RS10355 PF00950 ABC 3 transport family CJP42_RS10360 PF00005 ABC transporter CJP42_RS10365 PF01297 Zinc-uptake complex component A periplasmic CJP42_RS10370 PF01476 LysM domain CJP42_RS10370 PF08525 Opacity-associated protein A N-terminal motif CJP42_RS10370 PF01551 Peptidase family M23 CJP42_RS10380 PF03279 Bacterial lipid A biosynthesis acyltransferase CJP42_RS10385 PF00224 Pyruvate kinase, barrel domain CJP42_RS10385 PF02887 Pyruvate kinase, alpha/beta domain CJP42_RS10390 PF01380 SIS domain CJP42_RS10390 PF01418 Helix-turn-helix domain, rpiR family CJP42_RS10400 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CJP42_RS10400 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CJP42_RS10405 PF00920 Dehydratase family CJP42_RS10410 PF01081 KDPG and KHG aldolase CJP42_RS10415 PF02222 ATP-grasp domain CJP42_RS10420 PF07130 YebG protein CJP42_RS10425 PF13995 YebF-like protein CJP42_RS10430 PF04391 Protein of unknown function (DUF533) CJP42_RS10435 PF00326 Prolyl oligopeptidase family CJP42_RS10435 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CJP42_RS10440 PF00929 Exonuclease CJP42_RS10445 PF00795 Carbon-nitrogen hydrolase CJP42_RS10450 PF06440 DNA polymerase III, theta subunit CJP42_RS10455 PF04234 CopC domain CJP42_RS10460 PF05425 Copper resistance protein D CJP42_RS10465 PF10709 Protein of unknown function (DUF2511) CJP42_RS10495 PF00563 EAL domain CJP42_RS10495 PF00990 Diguanylate cyclase, GGDEF domain CJP42_RS10495 PF01590 GAF domain CJP42_RS10495 PF00360 Phytochrome region CJP42_RS10500 PF00753 Metallo-beta-lactamase superfamily CJP42_RS10500 PF14863 Alkyl sulfatase dimerisation CJP42_RS10500 PF14864 Alkyl sulfatase C-terminal CJP42_RS10520 PF00892 EamA-like transporter family CJP42_RS10550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJP42_RS10550 PF02824 TGS domain CJP42_RS10550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJP42_RS10550 PF03129 Anticodon binding domain CJP42_RS10570 PF07166 Protein of unknown function (DUF1398) CJP42_RS10585 PF00149 Calcineurin-like phosphoesterase CJP42_RS10590 PF07358 Protein of unknown function (DUF1482) CJP42_RS10595 PF07351 Protein of unknown function (DUF1480) CJP42_RS10600 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CJP42_RS10600 PF01189 16S rRNA methyltransferase RsmB/F CJP42_RS10600 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CJP42_RS10605 PF02470 MlaD protein CJP42_RS10610 PF04403 Paraquat-inducible protein A CJP42_RS10615 PF13185 GAF domain CJP42_RS10620 PF17516 ProQ C-terminal domain CJP42_RS10620 PF04352 ProQ/FINO family CJP42_RS10625 PF17804 Tail specific protease N-terminal domain CJP42_RS10625 PF11818 C-terminal domain of tail specific protease (DUF3340) CJP42_RS10625 PF03572 Peptidase family S41 CJP42_RS10625 PF00595 PDZ domain CJP42_RS10630 PF01435 Peptidase family M48 CJP42_RS10640 PF09339 IclR helix-turn-helix domain CJP42_RS10640 PF01614 Bacterial transcriptional regulator CJP42_RS10645 PF13996 YobH-like protein CJP42_RS10650 PF13998 MgrB protein CJP42_RS10655 PF13974 YebO-like protein CJP42_RS10660 PF10736 Protein of unknown function (DUF2627) CJP42_RS10665 PF00313 'Cold-shock' DNA-binding domain CJP42_RS10670 PF03717 Penicillin-binding Protein dimerisation domain CJP42_RS10670 PF00905 Penicillin binding protein transpeptidase domain CJP42_RS10675 PF13847 Methyltransferase domain CJP42_RS10680 PF02659 Putative manganese efflux pump CJP42_RS10690 PF06173 Protein of unknown function (DUF986) CJP42_RS10695 PF03613 PTS system mannose/fructose/sorbose family IID component CJP42_RS10700 PF03609 PTS system sorbose-specific iic component CJP42_RS10705 PF03610 PTS system fructose IIA component CJP42_RS10705 PF03830 PTS system sorbose subfamily IIB component CJP42_RS10715 PF03471 Transporter associated domain CJP42_RS10715 PF03741 Integral membrane protein TerC family CJP42_RS10720 PF00563 EAL domain CJP42_RS10720 PF12792 CSS motif domain associated with EAL CJP42_RS10725 PF03313 Serine dehydratase alpha chain CJP42_RS10725 PF03315 Serine dehydratase beta chain CJP42_RS10730 PF00293 NUDIX domain CJP42_RS10735 PF00425 chorismate binding enzyme CJP42_RS10735 PF04715 Anthranilate synthase component I, N terminal region CJP42_RS10740 PF03701 Uncharacterised protein family (UPF0181) CJP42_RS10745 PF01042 Endoribonuclease L-PSP CJP42_RS10750 PF13307 Helicase C-terminal domain CJP42_RS10750 PF04851 Type III restriction enzyme, res subunit CJP42_RS10755 PF00814 Glycoprotease family CJP42_RS10760 PF03843 Outer membrane lipoprotein Slp family CJP42_RS10770 PF00501 AMP-binding enzyme CJP42_RS10770 PF13193 AMP-binding enzyme C-terminal domain CJP42_RS10775 PF01612 3'-5' exonuclease CJP42_RS10775 PF00570 HRDC domain CJP42_RS10780 PF03776 Septum formation topological specificity factor MinE CJP42_RS10785 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJP42_RS10790 PF05209 Septum formation inhibitor MinC, N-terminal domain CJP42_RS10790 PF03775 Septum formation inhibitor MinC, C-terminal domain CJP42_RS10795 PF05166 YcgL domain CJP42_RS10800 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJP42_RS10805 PF03692 Putative zinc- or iron-chelating domain CJP42_RS10815 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system CJP42_RS10825 PF02600 Disulfide bond formation protein DsbB CJP42_RS10830 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CJP42_RS10835 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS10835 PF07840 FadR C-terminal domain CJP42_RS10840 PF04293 SpoVR like protein CJP42_RS10845 PF01266 FAD dependent oxidoreductase CJP42_RS10850 PF01168 Alanine racemase, N-terminal domain CJP42_RS10850 PF00842 Alanine racemase, C-terminal domain CJP42_RS10855 PF03471 Transporter associated domain CJP42_RS10855 PF02080 TrkA-C domain CJP42_RS10855 PF00999 Sodium/hydrogen exchanger family CJP42_RS10860 PF02016 LD-carboxypeptidase N-terminal domain CJP42_RS10860 PF17676 LD-carboxypeptidase C-terminal domain CJP42_RS10865 PF01464 Transglycosylase SLT domain CJP42_RS10870 PF07238 PilZ domain CJP42_RS10870 PF07317 Flagellar regulator YcgR CJP42_RS10875 PF04226 Transglycosylase associated protein CJP42_RS10885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJP42_RS10885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJP42_RS10890 PF08173 Membrane bound YbgT-like protein CJP42_RS10900 PF01654 Cytochrome bd terminal oxidase subunit I CJP42_RS10905 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CJP42_RS10910 PF07449 Hydrogenase-1 expression protein HyaE CJP42_RS10915 PF01750 Hydrogenase maturation protease CJP42_RS10920 PF01292 Prokaryotic cytochrome b561 CJP42_RS10925 PF00374 Nickel-dependent hydrogenase CJP42_RS10940 PF01926 50S ribosome-binding GTPase CJP42_RS10940 PF06071 Protein of unknown function (DUF933) CJP42_RS10945 PF01195 Peptidyl-tRNA hydrolase CJP42_RS10950 PF10762 Protein of unknown function (DUF2583) CJP42_RS10955 PF00916 Sulfate permease family CJP42_RS10955 PF01740 STAS domain CJP42_RS10960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJP42_RS10960 PF14572 Phosphoribosyl synthetase-associated domain CJP42_RS10965 PF08544 GHMP kinases C terminal CJP42_RS10965 PF00288 GHMP kinases N terminal domain CJP42_RS10970 PF03550 Outer membrane lipoprotein LolB CJP42_RS10975 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CJP42_RS10975 PF01488 Shikimate / quinate 5-dehydrogenase CJP42_RS10975 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CJP42_RS10980 PF03462 PCRF domain CJP42_RS10980 PF00472 RF-1 domain CJP42_RS10985 PF17827 PrmC N-terminal domain CJP42_RS10985 PF13847 Methyltransferase domain CJP42_RS10990 PF04247 Invasion gene expression up-regulator, SirB CJP42_RS10995 PF13369 Transglutaminase-like superfamily CJP42_RS11000 PF00793 DAHP synthetase I family CJP42_RS11010 PF01797 Transposase IS200 like CJP42_RS11045 PF03372 Endonuclease/Exonuclease/phosphatase family CJP42_RS11050 PF06183 DinI-like family CJP42_RS11055 PF00652 Ricin-type beta-trefoil lectin domain CJP42_RS11060 PF00313 'Cold-shock' DNA-binding domain CJP42_RS11075 PF06316 Enterobacterial Ail/Lom protein CJP42_RS11100 PF00011 Hsp20/alpha crystallin family CJP42_RS11110 PF01292 Prokaryotic cytochrome b561 CJP42_RS11120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJP42_RS11125 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS11130 PF12911 N-terminal TM domain of oligopeptide transport permease C CJP42_RS11130 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS11135 PF00005 ABC transporter CJP42_RS11140 PF00005 ABC transporter CJP42_RS11145 PF00924 Mechanosensitive ion channel CJP42_RS11160 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CJP42_RS11165 PF01909 Nucleotidyltransferase domain CJP42_RS11165 PF13427 Domain of unknown function (DUF4111) CJP42_RS11175 PF00376 MerR family regulatory protein CJP42_RS11175 PF09278 MerR, DNA binding CJP42_RS11190 PF01817 Chorismate mutase type II CJP42_RS11195 PF01810 LysE type translocator CJP42_RS11205 PF09313 Domain of unknown function (DUF1971) CJP42_RS11210 PF08956 Domain of unknown function (DUF1869) CJP42_RS11225 PF04226 Transglycosylase associated protein CJP42_RS11235 PF01797 Transposase IS200 like CJP42_RS11245 PF03891 Domain of unknown function (DUF333) CJP42_RS11255 PF04343 Protein of unknown function, DUF488 CJP42_RS11260 PF07690 Major Facilitator Superfamily CJP42_RS11265 PF02311 AraC-like ligand binding domain CJP42_RS11265 PF12833 Helix-turn-helix domain CJP42_RS11270 PF04284 Protein of unknown function (DUF441) CJP42_RS11280 PF04073 Aminoacyl-tRNA editing domain CJP42_RS11290 PF04285 Protein of unknown function (DUF444) CJP42_RS11295 PF08298 PrkA AAA domain CJP42_RS11295 PF06798 PrkA serine protein kinase C-terminal domain CJP42_RS11300 PF06629 MltA-interacting protein MipA CJP42_RS11310 PF00248 Aldo/keto reductase family CJP42_RS11315 PF01263 Aldose 1-epimerase CJP42_RS11320 PF01263 Aldose 1-epimerase CJP42_RS11330 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJP42_RS11330 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJP42_RS11335 PF01641 SelR domain CJP42_RS11340 PF07023 Protein of unknown function (DUF1315) CJP42_RS11345 PF00857 Isochorismatase family CJP42_RS11350 PF17763 Glutaminase/Asparaginase C-terminal domain CJP42_RS11350 PF00710 Asparaginase, N-terminal CJP42_RS11355 PF01343 Peptidase family S49 CJP42_RS11360 PF00881 Nitroreductase family CJP42_RS11365 PF02769 AIR synthase related protein, C-terminal domain CJP42_RS11365 PF00586 AIR synthase related protein, N-terminal domain CJP42_RS11370 PF01751 Toprim domain CJP42_RS11370 PF01131 DNA topoisomerase CJP42_RS11375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJP42_RS11375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJP42_RS11380 PF07383 Protein of unknown function (DUF1496) CJP42_RS11385 PF00293 NUDIX domain CJP42_RS11390 PF03372 Endonuclease/Exonuclease/phosphatase family CJP42_RS11400 PF00202 Aminotransferase class-III CJP42_RS11415 PF04996 Succinylarginine dihydrolase CJP42_RS11420 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CJP42_RS11425 PF07813 LTXXQ motif family protein CJP42_RS11435 PF02540 NAD synthase CJP42_RS11440 PF04355 SmpA / OmlA family CJP42_RS11450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJP42_RS11455 PF02378 Phosphotransferase system, EIIC CJP42_RS11460 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CJP42_RS11465 PF12833 Helix-turn-helix domain CJP42_RS11465 PF07883 Cupin domain CJP42_RS11470 PF02056 Family 4 glycosyl hydrolase CJP42_RS11470 PF11975 Family 4 glycosyl hydrolase C-terminal domain CJP42_RS11475 PF04794 YdjC-like protein CJP42_RS11485 PF01797 Transposase IS200 like CJP42_RS11490 PF00199 Catalase CJP42_RS11490 PF18011 C-terminal domain found in long catalases CJP42_RS11490 PF06628 Catalase-related immune-responsive CJP42_RS11495 PF10729 Cell division activator CedA CJP42_RS11500 PF00375 Sodium:dicarboxylate symporter family CJP42_RS11505 PF04307 LexA-binding, inner membrane-associated putative hydrolase CJP42_RS11510 PF13419 Haloacid dehalogenase-like hydrolase CJP42_RS11515 PF14002 YniB-like protein CJP42_RS11520 PF03881 Fructosamine kinase CJP42_RS11525 PF11080 Endoribonuclease GhoS CJP42_RS11530 PF00294 pfkB family carbohydrate kinase CJP42_RS11535 PF04338 Protein of unknown function, DUF481 CJP42_RS11570 PF03129 Anticodon binding domain CJP42_RS11570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJP42_RS11570 PF02824 TGS domain CJP42_RS11570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJP42_RS11575 PF00707 Translation initiation factor IF-3, C-terminal domain CJP42_RS11575 PF05198 Translation initiation factor IF-3, N-terminal domain CJP42_RS11580 PF01632 Ribosomal protein L35 CJP42_RS11585 PF00453 Ribosomal protein L20 CJP42_RS11595 PF01409 tRNA synthetases class II core domain (F) CJP42_RS11595 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CJP42_RS11600 PF01588 Putative tRNA binding domain CJP42_RS11600 PF03484 tRNA synthetase B5 domain CJP42_RS11600 PF03483 B3/4 domain CJP42_RS11600 PF03147 Ferredoxin-fold anticodon binding domain CJP42_RS11600 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CJP42_RS11605 PF00216 Bacterial DNA-binding protein CJP42_RS11610 PF01032 FecCD transport family CJP42_RS11615 PF00255 Glutathione peroxidase CJP42_RS11620 PF00005 ABC transporter CJP42_RS11625 PF00877 NlpC/P60 family CJP42_RS11630 PF00563 EAL domain CJP42_RS11635 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CJP42_RS11640 PF10636 Hemin uptake protein hemP CJP42_RS11645 PF00793 DAHP synthetase I family CJP42_RS11650 PF03618 Kinase/pyrophosphorylase CJP42_RS11655 PF02896 PEP-utilising enzyme, TIM barrel domain CJP42_RS11655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CJP42_RS11655 PF00391 PEP-utilising enzyme, mobile domain CJP42_RS11660 PF01487 Type I 3-dehydroquinase CJP42_RS11670 PF01594 AI-2E family transporter CJP42_RS11675 PF01565 FAD binding domain CJP42_RS11675 PF02913 FAD linked oxidases, C-terminal domain CJP42_RS11675 PF13183 4Fe-4S dicluster domain CJP42_RS11680 PF03061 Thioesterase superfamily CJP42_RS11685 PF15930 Domain of unknown function CJP42_RS11690 PF00375 Sodium:dicarboxylate symporter family CJP42_RS11695 PF01521 Iron-sulphur cluster biosynthesis CJP42_RS11700 PF01458 Uncharacterized protein family (UPF0051) CJP42_RS11705 PF00005 ABC transporter CJP42_RS11710 PF01458 Uncharacterized protein family (UPF0051) CJP42_RS11715 PF00266 Aminotransferase class-V CJP42_RS11720 PF02657 Fe-S metabolism associated domain CJP42_RS11730 PF04728 Lipoprotein leucine-zipper CJP42_RS11735 PF04728 Lipoprotein leucine-zipper CJP42_RS11740 PF02887 Pyruvate kinase, alpha/beta domain CJP42_RS11740 PF00224 Pyruvate kinase, barrel domain CJP42_RS11750 PF00324 Amino acid permease CJP42_RS11770 PF00384 Molybdopterin oxidoreductase CJP42_RS11770 PF01568 Molydopterin dinucleotide binding domain CJP42_RS11770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJP42_RS11775 PF03916 Polysulphide reductase, NrfD CJP42_RS11780 PF13247 4Fe-4S dicluster domain CJP42_RS11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS11785 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS11790 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS11790 PF00072 Response regulator receiver domain CJP42_RS11795 PF10965 Protein of unknown function (DUF2767) CJP42_RS11800 PF08349 Protein of unknown function (DUF1722) CJP42_RS11805 PF13411 MerR HTH family regulatory protein CJP42_RS11810 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS11810 PF00072 Response regulator receiver domain CJP42_RS11815 PF00072 Response regulator receiver domain CJP42_RS11815 PF01627 Hpt domain CJP42_RS11815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CJP42_RS11815 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS11815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS11815 PF00672 HAMP domain CJP42_RS11825 PF03958 Bacterial type II/III secretion system short domain CJP42_RS11825 PF00263 Bacterial type II and III secretion system protein CJP42_RS11845 PF03433 EspA-like secreted protein CJP42_RS11855 PF04888 Secretion system effector C (SseC) like family CJP42_RS11860 PF05802 Enterobacterial EspB protein CJP42_RS11900 PF01514 Secretory protein of YscJ/FliF family CJP42_RS11915 PF07201 HrpJ-like domain CJP42_RS11925 PF00771 FHIPEP family CJP42_RS11930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJP42_RS11930 PF18269 T3SS EscN ATPase C-terminal domain CJP42_RS11945 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJP42_RS11950 PF00813 FliP family CJP42_RS11955 PF01313 Bacterial export proteins, family 3 CJP42_RS11960 PF01311 Bacterial export proteins, family 1 CJP42_RS11965 PF01312 FlhB HrpN YscU SpaS Family CJP42_RS11980 PF01554 MatE CJP42_RS11985 PF00677 Lumazine binding domain CJP42_RS11995 PF07690 Major Facilitator Superfamily CJP42_RS12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS12000 PF03466 LysR substrate binding domain CJP42_RS12005 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS12020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJP42_RS12020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJP42_RS12025 PF00877 NlpC/P60 family CJP42_RS12030 PF00462 Glutaredoxin CJP42_RS12040 PF00929 Exonuclease CJP42_RS12045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJP42_RS12050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJP42_RS12055 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS12055 PF16925 Tetracyclin repressor-like, C-terminal domain CJP42_RS12060 PF06945 Protein of unknown function (DUF1289) CJP42_RS12065 PF00248 Aldo/keto reductase family CJP42_RS12070 PF00080 Copper/zinc superoxide dismutase (SODC) CJP42_RS12075 PF04632 Fusaric acid resistance protein family CJP42_RS12080 PF00529 HlyD membrane-fusion protein of T1SS CJP42_RS12080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJP42_RS12085 PF07869 Protein of unknown function (DUF1656) CJP42_RS12090 PF01047 MarR family CJP42_RS12095 PF05433 Glycine zipper 2TM domain CJP42_RS12100 PF03702 Anhydro-N-acetylmuramic acid kinase CJP42_RS12110 PF01243 Pyridoxamine 5'-phosphate oxidase CJP42_RS12110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CJP42_RS12115 PF01479 S4 domain CJP42_RS12115 PF00579 tRNA synthetases class I (W and Y) CJP42_RS12125 PF02798 Glutathione S-transferase, N-terminal domain CJP42_RS12125 PF00043 Glutathione S-transferase, C-terminal domain CJP42_RS12130 PF00854 POT family CJP42_RS12135 PF10576 Iron-sulfur binding domain of endonuclease III CJP42_RS12135 PF00730 HhH-GPD superfamily base excision DNA repair protein CJP42_RS12135 PF00633 Helix-hairpin-helix motif CJP42_RS12140 PF02508 Rnf-Nqr subunit, membrane protein CJP42_RS12145 PF04205 FMN-binding domain CJP42_RS12150 PF03116 NQR2, RnfD, RnfE family CJP42_RS12155 PF12838 4Fe-4S dicluster domain CJP42_RS12155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJP42_RS12155 PF10531 SLBB domain CJP42_RS12155 PF13375 RnfC Barrel sandwich hybrid domain CJP42_RS12160 PF04060 Putative Fe-S cluster CJP42_RS12165 PF02508 Rnf-Nqr subunit, membrane protein CJP42_RS12170 PF10754 Protein of unknown function (DUF2569) CJP42_RS12175 PF05321 Haemolysin expression modulating protein CJP42_RS12185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJP42_RS12185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJP42_RS12190 PF00962 Adenosine/AMP deaminase CJP42_RS12200 PF02378 Phosphotransferase system, EIIC CJP42_RS12200 PF00367 phosphotransferase system, EIIB CJP42_RS12205 PF06097 Bacterial protein of unknown function (DUF945) CJP42_RS12210 PF01238 Phosphomannose isomerase type I CJP42_RS12215 PF05683 Fumarase C-terminus CJP42_RS12215 PF05681 Fumarate hydratase (Fumerase) CJP42_RS12220 PF00206 Lyase CJP42_RS12220 PF10415 Fumarase C C-terminus CJP42_RS12225 PF05472 DNA replication terminus site-binding protein (Ter protein) CJP42_RS12230 PF00672 HAMP domain CJP42_RS12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS12230 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS12235 PF01979 Amidohydrolase family CJP42_RS12235 PF13382 Adenine deaminase C-terminal domain CJP42_RS12240 PF00267 Gram-negative porin CJP42_RS12250 PF00072 Response regulator receiver domain CJP42_RS12250 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS12255 PF06942 GlpM protein CJP42_RS12260 PF13520 Amino acid permease CJP42_RS12265 PF00239 Resolvase, N terminal domain CJP42_RS12265 PF02796 Helix-turn-helix domain of resolvase CJP42_RS12270 PF07484 Phage Tail Collar Domain CJP42_RS12275 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CJP42_RS12280 PF07484 Phage Tail Collar Domain CJP42_RS12285 PF07484 Phage Tail Collar Domain CJP42_RS12395 PF04233 Phage Mu protein F like protein CJP42_RS12405 PF03237 Terminase-like family CJP42_RS12455 PF13401 AAA domain CJP42_RS12455 PF01471 Putative peptidoglycan binding domain CJP42_RS12465 PF07352 Bacteriophage Mu Gam like protein CJP42_RS12510 PF06252 Protein of unknown function (DUF1018) CJP42_RS12515 PF08765 Mor transcription activator family CJP42_RS12520 PF07338 Protein of unknown function (DUF1471) CJP42_RS12525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJP42_RS12525 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJP42_RS12525 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CJP42_RS12530 PF02233 NAD(P) transhydrogenase beta subunit CJP42_RS12535 PF01594 AI-2E family transporter CJP42_RS12545 PF00893 Small Multidrug Resistance protein CJP42_RS12550 PF00893 Small Multidrug Resistance protein CJP42_RS12555 PF00089 Trypsin CJP42_RS12575 PF07690 Major Facilitator Superfamily CJP42_RS12580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS12580 PF03466 LysR substrate binding domain CJP42_RS12590 PF00480 ROK family CJP42_RS12600 PF00654 Voltage gated chloride channel CJP42_RS12605 PF00571 CBS domain CJP42_RS12605 PF00005 ABC transporter CJP42_RS12610 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS12615 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CJP42_RS12620 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS12625 PF02613 Nitrate reductase delta subunit CJP42_RS12630 PF04976 DMSO reductase anchor subunit (DmsC) CJP42_RS12635 PF12800 4Fe-4S binding domain CJP42_RS12635 PF13247 4Fe-4S dicluster domain CJP42_RS12640 PF01568 Molydopterin dinucleotide binding domain CJP42_RS12640 PF00384 Molybdopterin oxidoreductase CJP42_RS12640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJP42_RS12655 PF06788 Uncharacterised protein family (UPF0257) CJP42_RS12660 PF13302 Acetyltransferase (GNAT) domain CJP42_RS12665 PF06932 Protein of unknown function (DUF1283) CJP42_RS12670 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CJP42_RS12675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJP42_RS12675 PF13378 Enolase C-terminal domain-like CJP42_RS12680 PF00107 Zinc-binding dehydrogenase CJP42_RS12680 PF08240 Alcohol dehydrogenase GroES-like domain CJP42_RS12685 PF07690 Major Facilitator Superfamily CJP42_RS12685 PF00083 Sugar (and other) transporter CJP42_RS12695 PF14001 YdfZ protein CJP42_RS12700 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS12700 PF07729 FCD domain CJP42_RS12705 PF00106 short chain dehydrogenase CJP42_RS12710 PF01432 Peptidase family M3 CJP42_RS12720 PF10685 Stress-induced bacterial acidophilic repeat motif CJP42_RS12725 PF02464 Competence-damaged protein CJP42_RS12745 PF07690 Major Facilitator Superfamily CJP42_RS12750 PF00892 EamA-like transporter family CJP42_RS12755 PF13999 MarB protein CJP42_RS12760 PF12833 Helix-turn-helix domain CJP42_RS12765 PF01047 MarR family CJP42_RS12770 PF01914 MarC family integral membrane protein CJP42_RS12775 PF07690 Major Facilitator Superfamily CJP42_RS12785 PF03466 LysR substrate binding domain CJP42_RS12785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS12790 PF00171 Aldehyde dehydrogenase family CJP42_RS12795 PF04960 Glutaminase CJP42_RS12800 PF13811 Domain of unknown function (DUF4186) CJP42_RS12805 PF01062 Bestrophin, RFP-TM, chloride channel CJP42_RS12825 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CJP42_RS12835 PF01455 HupF/HypC family CJP42_RS12840 PF01750 Hydrogenase maturation protease CJP42_RS12845 PF01292 Prokaryotic cytochrome b561 CJP42_RS12855 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CJP42_RS12855 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJP42_RS12865 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS12865 PF07729 FCD domain CJP42_RS12870 PF08240 Alcohol dehydrogenase GroES-like domain CJP42_RS12870 PF00107 Zinc-binding dehydrogenase CJP42_RS12875 PF07690 Major Facilitator Superfamily CJP42_RS12885 PF07690 Major Facilitator Superfamily CJP42_RS12900 PF02547 Queuosine biosynthesis protein CJP42_RS12905 PF01042 Endoribonuclease L-PSP CJP42_RS12935 PF00155 Aminotransferase class I and II CJP42_RS12945 PF00128 Alpha amylase, catalytic domain CJP42_RS12950 PF00128 Alpha amylase, catalytic domain CJP42_RS12950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJP42_RS12950 PF11941 Domain of unknown function (DUF3459) CJP42_RS12960 PF06411 HdeA/HdeB family CJP42_RS12975 PF06109 Haemolysin E (HlyE) CJP42_RS12980 PF02566 OsmC-like protein CJP42_RS12985 PF10684 Putative biofilm-dependent modulation protein CJP42_RS12990 PF08136 30S ribosomal protein subunit S22 family CJP42_RS12995 PF03949 Malic enzyme, NAD binding domain CJP42_RS12995 PF00390 Malic enzyme, N-terminal domain CJP42_RS13000 PF00107 Zinc-binding dehydrogenase CJP42_RS13000 PF08240 Alcohol dehydrogenase GroES-like domain CJP42_RS13020 PF07690 Major Facilitator Superfamily CJP42_RS13025 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS13030 PF07690 Major Facilitator Superfamily CJP42_RS13035 PF01568 Molydopterin dinucleotide binding domain CJP42_RS13035 PF00384 Molybdopterin oxidoreductase CJP42_RS13035 PF14710 Respiratory nitrate reductase alpha N-terminal CJP42_RS13040 PF13247 4Fe-4S dicluster domain CJP42_RS13040 PF14711 Respiratory nitrate reductase beta C-terminal CJP42_RS13055 PF02567 Phenazine biosynthesis-like protein CJP42_RS13060 PF00797 N-acetyltransferase CJP42_RS13075 PF00324 Amino acid permease CJP42_RS13080 PF06004 Bacterial protein of unknown function (DUF903) CJP42_RS13090 PF00593 TonB dependent receptor CJP42_RS13090 PF07715 TonB-dependent Receptor Plug Domain CJP42_RS13095 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS13095 PF07729 FCD domain CJP42_RS13100 PF00107 Zinc-binding dehydrogenase CJP42_RS13100 PF16884 N-terminal domain of oxidoreductase CJP42_RS13110 PF04657 Putative inner membrane exporter, YdcZ CJP42_RS13115 PF10735 Protein of unknown function (DUF2526) CJP42_RS13135 PF10753 Toxin GhoT_OrtT CJP42_RS13145 PF00171 Aldehyde dehydrogenase family CJP42_RS13150 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS13150 PF00155 Aminotransferase class I and II CJP42_RS13155 PF01427 D-ala-D-ala dipeptidase CJP42_RS13170 PF06767 Sif protein CJP42_RS13175 PF10829 Protein of unknown function (DUF2554) CJP42_RS13180 PF01136 Peptidase family U32 CJP42_RS13180 PF12392 Collagenase CJP42_RS13185 PF01381 Helix-turn-helix CJP42_RS13185 PF07883 Cupin domain CJP42_RS13190 PF03594 Benzoate membrane transport protein CJP42_RS13195 PF11769 Protein of unknown function (DUF3313) CJP42_RS13200 PF03848 Tellurite resistance protein TehB CJP42_RS13205 PF03595 Voltage-dependent anion channel CJP42_RS13210 PF18836 Beta solenoid repeat from YDCK CJP42_RS13215 PF13302 Acetyltransferase (GNAT) domain CJP42_RS13220 PF05343 M42 glutamyl aminopeptidase CJP42_RS13225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJP42_RS13230 PF03611 PTS system sugar-specific permease component CJP42_RS13235 PF03437 BtpA family CJP42_RS13240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJP42_RS13245 PF00834 Ribulose-phosphate 3 epimerase family CJP42_RS13250 PF00455 DeoR C terminal sensor domain CJP42_RS13250 PF08220 DeoR-like helix-turn-helix domain CJP42_RS13255 PF00583 Acetyltransferase (GNAT) family CJP42_RS13260 PF01070 FMN-dependent dehydrogenase CJP42_RS13265 PF04264 YceI-like domain CJP42_RS13270 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJP42_RS13275 PF00135 Carboxylesterase family CJP42_RS13295 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJP42_RS13300 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS13305 PF00005 ABC transporter CJP42_RS13310 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS13320 PF08242 Methyltransferase domain CJP42_RS13330 PF02698 DUF218 domain CJP42_RS13335 PF00271 Helicase conserved C-terminal domain CJP42_RS13335 PF11898 Domain of unknown function (DUF3418) CJP42_RS13335 PF00270 DEAD/DEAH box helicase CJP42_RS13335 PF04408 Helicase associated domain (HA2) CJP42_RS13335 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CJP42_RS13340 PF02525 Flavodoxin-like fold CJP42_RS13350 PF07027 Protein of unknown function (DUF1318) CJP42_RS13355 PF13617 YnbE-like lipoprotein CJP42_RS13365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJP42_RS13365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJP42_RS13370 PF03724 META domain CJP42_RS13375 PF03891 Domain of unknown function (DUF333) CJP42_RS13385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJP42_RS13385 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CJP42_RS13385 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CJP42_RS13385 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CJP42_RS13385 PF10371 Domain of unknown function CJP42_RS13390 PF01797 Transposase IS200 like CJP42_RS13405 PF00582 Universal stress protein family CJP42_RS13410 PF00893 Small Multidrug Resistance protein CJP42_RS13420 PF00589 Phage integrase family CJP42_RS13420 PF12167 Arm DNA-binding domain CJP42_RS13425 PF01171 PP-loop family CJP42_RS13440 PF01544 CorA-like Mg2+ transporter protein CJP42_RS13445 PF00672 HAMP domain CJP42_RS13445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJP42_RS13445 PF02203 Tar ligand binding domain homologue CJP42_RS13455 PF01713 Smr domain CJP42_RS13460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJP42_RS13460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJP42_RS13465 PF00027 Cyclic nucleotide-binding domain CJP42_RS13465 PF13545 Crp-like helix-turn-helix domain CJP42_RS13470 PF00582 Universal stress protein family CJP42_RS13475 PF10749 Protein of unknown function (DUF2534) CJP42_RS13480 PF00924 Mechanosensitive ion channel CJP42_RS13500 PF08534 Redoxin CJP42_RS13520 PF12833 Helix-turn-helix domain CJP42_RS13520 PF06445 GyrI-like small molecule binding domain CJP42_RS13535 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS13545 PF00248 Aldo/keto reductase family CJP42_RS13550 PF03466 LysR substrate binding domain CJP42_RS13550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS13560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJP42_RS13565 PF00246 Zinc carboxypeptidase CJP42_RS13570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJP42_RS13570 PF13378 Enolase C-terminal domain-like CJP42_RS13575 PF08534 Redoxin CJP42_RS13590 PF18024 Helix-turn-helix domain CJP42_RS13590 PF00158 Sigma-54 interaction domain CJP42_RS13595 PF05128 Domain of unknown function (DUF697) CJP42_RS13600 PF04317 YcjX-like family, DUF463 CJP42_RS13605 PF00581 Rhodanese-like domain CJP42_RS13610 PF09584 Phage shock protein PspD (Phageshock_PspD) CJP42_RS13615 PF04024 PspC domain CJP42_RS13620 PF06667 Phage shock protein B CJP42_RS13625 PF04012 PspA/IM30 family CJP42_RS13630 PF02954 Bacterial regulatory protein, Fis family CJP42_RS13630 PF00158 Sigma-54 interaction domain CJP42_RS13635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJP42_RS13640 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS13690 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS13690 PF12911 N-terminal TM domain of oligopeptide transport permease C CJP42_RS13695 PF00005 ABC transporter CJP42_RS13695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJP42_RS13700 PF00005 ABC transporter CJP42_RS13740 PF00773 RNB domain CJP42_RS13740 PF17876 Cold shock domain CJP42_RS13740 PF00575 S1 RNA binding domain CJP42_RS13740 PF08206 Ribonuclease B OB domain CJP42_RS13750 PF00990 Diguanylate cyclase, GGDEF domain CJP42_RS13750 PF00563 EAL domain CJP42_RS13750 PF13426 PAS domain CJP42_RS13760 PF00455 DeoR C terminal sensor domain CJP42_RS13760 PF08220 DeoR-like helix-turn-helix domain CJP42_RS13765 PF05433 Glycine zipper 2TM domain CJP42_RS13770 PF01253 Translation initiation factor SUI1 CJP42_RS13775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJP42_RS13785 PF18073 Rubredoxin metal binding domain CJP42_RS13790 PF06305 Lipopolysaccharide assembly protein A domain CJP42_RS13800 PF01569 PAP2 superfamily CJP42_RS13805 PF00925 GTP cyclohydrolase II CJP42_RS13810 PF00330 Aconitase family (aconitate hydratase) CJP42_RS13810 PF00694 Aconitase C-terminal domain CJP42_RS13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS13825 PF03466 LysR substrate binding domain CJP42_RS13830 PF08272 Topoisomerase I zinc-ribbon-like CJP42_RS13830 PF01131 DNA topoisomerase CJP42_RS13830 PF01751 Toprim domain CJP42_RS13830 PF01396 Topoisomerase DNA binding C4 zinc finger CJP42_RS13840 PF10692 Protein of unknown function (DUF2498) CJP42_RS13845 PF01343 Peptidase family S49 CJP42_RS13845 PF08496 Peptidase family S49 N-terminal CJP42_RS13850 PF00106 short chain dehydrogenase CJP42_RS13855 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CJP42_RS13860 PF00849 RNA pseudouridylate synthase CJP42_RS13860 PF01479 S4 domain CJP42_RS13865 PF01300 Telomere recombination CJP42_RS13870 PF02811 PHP domain CJP42_RS13875 PF08255 Trp-operon Leader Peptide CJP42_RS13880 PF00425 chorismate binding enzyme CJP42_RS13880 PF04715 Anthranilate synthase component I, N terminal region CJP42_RS13885 PF00117 Glutamine amidotransferase class-I CJP42_RS13885 PF00591 Glycosyl transferase family, a/b domain CJP42_RS13885 PF02885 Glycosyl transferase family, helical bundle domain CJP42_RS13890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CJP42_RS13890 PF00218 Indole-3-glycerol phosphate synthase CJP42_RS13895 PF00291 Pyridoxal-phosphate dependent enzyme CJP42_RS13900 PF00290 Tryptophan synthase alpha chain CJP42_RS13905 PF10685 Stress-induced bacterial acidophilic repeat motif CJP42_RS13910 PF05974 Domain of unknown function (DUF892) CJP42_RS13915 PF05974 Domain of unknown function (DUF892) CJP42_RS13920 PF05067 Manganese containing catalase CJP42_RS13925 PF03922 OmpW family CJP42_RS13930 PF03692 Putative zinc- or iron-chelating domain CJP42_RS13940 PF04279 Intracellular septation protein A CJP42_RS13945 PF03061 Thioesterase superfamily CJP42_RS13950 PF03544 Gram-negative bacterial TonB protein C-terminal CJP42_RS13955 PF03795 YCII-related domain CJP42_RS13960 PF13396 Phospholipase_D-nuclease N-terminal CJP42_RS13960 PF13091 PLD-like domain CJP42_RS13965 PF04269 Protein of unknown function, DUF440 CJP42_RS13970 PF00520 Ion transport protein CJP42_RS13970 PF00027 Cyclic nucleotide-binding domain CJP42_RS13975 PF00005 ABC transporter CJP42_RS13975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJP42_RS13980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJP42_RS13980 PF00005 ABC transporter CJP42_RS13990 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS13995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJP42_RS14005 PF01914 MarC family integral membrane protein CJP42_RS14010 PF00465 Iron-containing alcohol dehydrogenase CJP42_RS14010 PF00171 Aldehyde dehydrogenase family CJP42_RS14015 PF00265 Thymidine kinase CJP42_RS14020 PF00816 H-NS histone family CJP42_RS14025 PF00483 Nucleotidyl transferase CJP42_RS14030 PF00072 Response regulator receiver domain CJP42_RS14035 PF01734 Patatin-like phospholipase CJP42_RS14045 PF00551 Formyl transferase CJP42_RS14045 PF01842 ACT domain CJP42_RS14075 PF02665 Nitrate reductase gamma subunit CJP42_RS14080 PF02613 Nitrate reductase delta subunit CJP42_RS14085 PF14711 Respiratory nitrate reductase beta C-terminal CJP42_RS14085 PF13247 4Fe-4S dicluster domain CJP42_RS14090 PF00384 Molybdopterin oxidoreductase CJP42_RS14090 PF01568 Molydopterin dinucleotide binding domain CJP42_RS14090 PF14710 Respiratory nitrate reductase alpha N-terminal CJP42_RS14095 PF07690 Major Facilitator Superfamily CJP42_RS14105 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CJP42_RS14105 PF07730 Histidine kinase CJP42_RS14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS14105 PF00672 HAMP domain CJP42_RS14110 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS14110 PF00072 Response regulator receiver domain CJP42_RS14115 PF11924 Inverse autotransporter, beta-domain CJP42_RS14120 PF02635 DsrE/DsrF-like family CJP42_RS14125 PF06150 ChaB CJP42_RS14130 PF01699 Sodium/calcium exchanger protein CJP42_RS14145 PF00180 Isocitrate/isopropylmalate dehydrogenase CJP42_RS14150 PF00849 RNA pseudouridylate synthase CJP42_RS14160 PF00293 NUDIX domain CJP42_RS14170 PF04356 Protein of unknown function (DUF489) CJP42_RS14175 PF08328 Adenylosuccinate lyase C-terminal CJP42_RS14175 PF00206 Lyase CJP42_RS14180 PF00072 Response regulator receiver domain CJP42_RS14180 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS14185 PF08918 PhoQ Sensor CJP42_RS14185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS14190 PF08007 Cupin superfamily protein CJP42_RS14200 PF01546 Peptidase family M20/M25/M40 CJP42_RS14200 PF07687 Peptidase dimerisation domain CJP42_RS14205 PF00005 ABC transporter CJP42_RS14205 PF08402 TOBE domain CJP42_RS14210 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS14215 PF06767 Sif protein CJP42_RS14220 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS14225 PF13416 Bacterial extracellular solute-binding protein CJP42_RS14230 PF02146 Sir2 family CJP42_RS14235 PF00480 ROK family CJP42_RS14240 PF02687 FtsX-like permease family CJP42_RS14240 PF12704 MacB-like periplasmic core domain CJP42_RS14245 PF00005 ABC transporter CJP42_RS14250 PF02687 FtsX-like permease family CJP42_RS14250 PF12704 MacB-like periplasmic core domain CJP42_RS14255 PF03461 TRCF domain CJP42_RS14255 PF17757 UvrB interaction domain CJP42_RS14255 PF02559 CarD-like/TRCF domain CJP42_RS14255 PF00270 DEAD/DEAH box helicase CJP42_RS14255 PF00271 Helicase conserved C-terminal domain CJP42_RS14265 PF07338 Protein of unknown function (DUF1471) CJP42_RS14270 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS14275 PF05433 Glycine zipper 2TM domain CJP42_RS14280 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS14285 PF05728 Uncharacterised protein family (UPF0227) CJP42_RS14290 PF00933 Glycosyl hydrolase family 3 N terminal domain CJP42_RS14295 PF01636 Phosphotransferase enzyme family CJP42_RS14300 PF13036 Peptidoglycan-synthase activator LpoB CJP42_RS14305 PF07233 Protein of unknown function (DUF1425) CJP42_RS14310 PF01230 HIT domain CJP42_RS14320 PF00367 phosphotransferase system, EIIB CJP42_RS14320 PF02378 Phosphotransferase system, EIIC CJP42_RS14325 PF01026 TatD related DNase CJP42_RS14330 PF09115 DNA polymerase III, delta subunit, C terminal CJP42_RS14335 PF02223 Thymidylate kinase CJP42_RS14340 PF02618 YceG-like family CJP42_RS14345 PF01063 Amino-transferase class IV CJP42_RS14350 PF00109 Beta-ketoacyl synthase, N-terminal domain CJP42_RS14350 PF02801 Beta-ketoacyl synthase, C-terminal domain CJP42_RS14355 PF00550 Phosphopantetheine attachment site CJP42_RS14365 PF00698 Acyl transferase domain CJP42_RS14370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJP42_RS14370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJP42_RS14375 PF02504 Fatty acid synthesis protein CJP42_RS14380 PF01783 Ribosomal L32p protein family CJP42_RS14385 PF02620 Large ribosomal RNA subunit accumulation protein YceD CJP42_RS14390 PF02545 Maf-like protein CJP42_RS14395 PF01479 S4 domain CJP42_RS14395 PF00849 RNA pseudouridylate synthase CJP42_RS14405 PF10150 Ribonuclease E/G family CJP42_RS14405 PF12111 Polyribonucleotide phosphorylase C terminal CJP42_RS14405 PF00575 S1 RNA binding domain CJP42_RS14420 PF01797 Transposase IS200 like CJP42_RS14430 PF00669 Bacterial flagellin N-terminal helical region CJP42_RS14435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJP42_RS14435 PF00460 Flagella basal body rod protein CJP42_RS14440 PF10135 Rod binding protein CJP42_RS14440 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CJP42_RS14445 PF02119 Flagellar P-ring protein CJP42_RS14450 PF02107 Flagellar L-ring protein CJP42_RS14455 PF00460 Flagella basal body rod protein CJP42_RS14455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJP42_RS14460 PF00460 Flagella basal body rod protein CJP42_RS14460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJP42_RS14465 PF07559 Flagellar basal body protein FlaE CJP42_RS14465 PF00460 Flagella basal body rod protein CJP42_RS14465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJP42_RS14470 PF03963 Flagellar hook capping protein - N-terminal region CJP42_RS14470 PF13861 FlgD Tudor-like domain CJP42_RS14470 PF13860 FlgD Ig-like domain CJP42_RS14475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJP42_RS14475 PF00460 Flagella basal body rod protein CJP42_RS14480 PF00460 Flagella basal body rod protein CJP42_RS14490 PF13144 Chaperone for flagella basal body P-ring formation CJP42_RS14495 PF04316 Anti-sigma-28 factor, FlgM CJP42_RS14500 PF05130 FlgN protein CJP42_RS14505 PF03023 Lipid II flippase MurJ CJP42_RS14510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJP42_RS14515 PF04337 Protein of unknown function, DUF480 CJP42_RS14520 PF13302 Acetyltransferase (GNAT) domain CJP42_RS14525 PF07690 Major Facilitator Superfamily CJP42_RS14530 PF04399 Glutaredoxin 2, C terminal domain CJP42_RS14530 PF13417 Glutathione S-transferase, N-terminal domain CJP42_RS14535 PF07273 Protein of unknown function (DUF1439) CJP42_RS14540 PF01979 Amidohydrolase family CJP42_RS14545 PF06183 DinI-like family CJP42_RS14550 PF13991 BssS protein family CJP42_RS14555 PF01266 FAD dependent oxidoreductase CJP42_RS14560 PF10968 Protein of unknown function (DUF2770) CJP42_RS14575 PF04264 YceI-like domain CJP42_RS14580 PF12368 Rhodanase C-terminal CJP42_RS14580 PF17773 UPF0176 acylphosphatase like domain CJP42_RS14580 PF00581 Rhodanese-like domain CJP42_RS14585 PF03279 Bacterial lipid A biosynthesis acyltransferase CJP42_RS14595 PF07690 Major Facilitator Superfamily CJP42_RS14600 PF13984 MsyB protein CJP42_RS14605 PF07119 Protein of unknown function (DUF1375) CJP42_RS14610 PF00535 Glycosyl transferase family 2 CJP42_RS14615 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJP42_RS14620 PF01757 Acyltransferase family CJP42_RS14625 PF13091 PLD-like domain CJP42_RS14630 PF01661 Macro domain CJP42_RS14640 PF10610 Thin aggregative fimbriae synthesis protein CJP42_RS14645 PF07012 Curlin associated repeat CJP42_RS14650 PF07012 Curlin associated repeat CJP42_RS14660 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS14665 PF10627 Curli assembly protein CsgE CJP42_RS14670 PF10614 Type VIII secretion system (T8SS), CsgF protein CJP42_RS14675 PF03783 Curli production assembly/transport component CsgG CJP42_RS14680 PF06496 Protein of unknown function (DUF1097) CJP42_RS14685 PF02613 Nitrate reductase delta subunit CJP42_RS14690 PF02811 PHP domain CJP42_RS14695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJP42_RS14720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJP42_RS14720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJP42_RS14725 PF07690 Major Facilitator Superfamily CJP42_RS14730 PF06178 Oligogalacturonate-specific porin protein (KdgM) CJP42_RS14740 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CJP42_RS14755 PF01418 Helix-turn-helix domain, rpiR family CJP42_RS14755 PF01380 SIS domain CJP42_RS14760 PF02562 PhoH-like protein CJP42_RS14770 PF00474 Sodium:solute symporter family CJP42_RS14780 PF14850 DNA-binding domain of Proline dehydrogenase CJP42_RS14780 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CJP42_RS14780 PF01619 Proline dehydrogenase CJP42_RS14780 PF00171 Aldehyde dehydrogenase family CJP42_RS14790 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS14790 PF08362 YcdC-like protein, C-terminal region CJP42_RS14795 PF10685 Stress-induced bacterial acidophilic repeat motif CJP42_RS14800 PF03358 NADPH-dependent FMN reductase CJP42_RS14805 PF13993 YccJ-like protein CJP42_RS14810 PF00328 Histidine phosphatase superfamily (branch 2) CJP42_RS14815 PF00578 AhpC/TSA family CJP42_RS14820 PF06965 Na+/H+ antiporter 1 CJP42_RS14820 PF13462 Thioredoxin CJP42_RS14825 PF13098 Thioredoxin-like domain CJP42_RS14825 PF02683 Cytochrome C biogenesis protein transmembrane region CJP42_RS14825 PF11412 Disulphide bond corrector protein DsbC CJP42_RS14840 PF01556 DnaJ C terminal domain CJP42_RS14840 PF00226 DnaJ domain CJP42_RS14860 PF12706 Beta-lactamase superfamily domain CJP42_RS14870 PF07690 Major Facilitator Superfamily CJP42_RS14875 PF03328 HpcH/HpaI aldolase/citrate lyase family CJP42_RS14880 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJP42_RS14885 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CJP42_RS14890 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJP42_RS14900 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJP42_RS14905 PF01047 MarR family CJP42_RS14915 PF01613 Flavin reductase like domain CJP42_RS14925 PF00576 HIUase/Transthyretin family CJP42_RS14930 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS14930 PF00072 Response regulator receiver domain CJP42_RS14935 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS14935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS14940 PF03577 Peptidase family C69 CJP42_RS14950 PF13132 Domain of unknown function (DUF3950) CJP42_RS14955 PF05925 Enterobacterial virulence protein IpgD CJP42_RS14960 PF07824 Type III secretion chaperone domain CJP42_RS14970 PF00805 Pentapeptide repeats (8 copies) CJP42_RS14995 PF01027 Inhibitor of apoptosis-promoting Bax1 CJP42_RS15000 PF04358 DsrC like protein CJP42_RS15005 PF00708 Acylphosphatase CJP42_RS15035 PF17785 PUA-like domain CJP42_RS15035 PF10672 S-adenosylmethionine-dependent methyltransferase CJP42_RS15040 PF08755 Hemimethylated DNA-binding protein YccV like CJP42_RS15045 PF13380 CoA binding domain CJP42_RS15050 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CJP42_RS15055 PF02142 MGS-like domain CJP42_RS15060 PF12462 DNA helicase IV / RNA helicase N terminal CJP42_RS15060 PF00580 UvrD/REP helicase N-terminal domain CJP42_RS15060 PF13361 UvrD-like helicase C-terminal domain CJP42_RS15065 PF03733 Inner membrane component domain CJP42_RS15070 PF12805 FUSC-like inner membrane protein yccS CJP42_RS15075 PF04994 TfoX C-terminal domain CJP42_RS15075 PF04993 TfoX N-terminal domain CJP42_RS15080 PF03846 Cell division inhibitor SulA CJP42_RS15085 PF00691 OmpA family CJP42_RS15085 PF01389 OmpA-like transmembrane domain CJP42_RS15090 PF17414 MatP C-terminal ribbon-helix-helix domain CJP42_RS15090 PF06303 MatP N-terminal domain CJP42_RS15095 PF05362 Lon protease (S16) C-terminal proteolytic domain CJP42_RS15095 PF13654 AAA domain CJP42_RS15100 PF07977 FabA-like domain CJP42_RS15105 PF04957 Ribosome modulation factor CJP42_RS15110 PF03886 ABC-type transport auxiliary lipoprotein component CJP42_RS15115 PF02470 MlaD protein CJP42_RS15120 PF04403 Paraquat-inducible protein A CJP42_RS15125 PF12848 ABC transporter CJP42_RS15125 PF16326 ABC transporter C-terminal domain CJP42_RS15125 PF00005 ABC transporter CJP42_RS15130 PF10672 S-adenosylmethionine-dependent methyltransferase CJP42_RS15130 PF02926 THUMP domain CJP42_RS15130 PF01170 Putative RNA methylase family UPF0020 CJP42_RS15135 PF00111 2Fe-2S iron-sulfur cluster binding domain CJP42_RS15135 PF03473 MOSC domain CJP42_RS15135 PF03476 MOSC N-terminal beta barrel domain CJP42_RS15140 PF07126 Cell-division protein ZapC CJP42_RS15145 PF01180 Dihydroorotate dehydrogenase CJP42_RS15150 PF11940 Domain of unknown function (DUF3458) Ig-like fold CJP42_RS15150 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CJP42_RS15150 PF01433 Peptidase family M1 domain CJP42_RS15155 PF06183 DinI-like family CJP42_RS15315 PF17288 Terminase RNAseH like domain CJP42_RS15315 PF04466 Phage terminase large subunit CJP42_RS15335 PF10721 Protein of unknown function (DUF2514) CJP42_RS15340 PF00182 Chitinase class I CJP42_RS15365 PF03589 Antitermination protein CJP42_RS15395 PF06183 DinI-like family CJP42_RS15440 PF01695 IstB-like ATP binding protein CJP42_RS15460 PF00717 Peptidase S24-like CJP42_RS15460 PF01381 Helix-turn-helix CJP42_RS15490 PF02086 D12 class N6 adenine-specific DNA methyltransferase CJP42_RS15505 PF12167 Arm DNA-binding domain CJP42_RS15505 PF00589 Phage integrase family CJP42_RS15510 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CJP42_RS15510 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CJP42_RS15515 PF01235 Sodium:alanine symporter family CJP42_RS15530 PF01037 Lrp/AsnC ligand binding domain CJP42_RS15530 PF13404 AsnC-type helix-turn-helix domain CJP42_RS15535 PF01336 OB-fold nucleic acid binding domain CJP42_RS15535 PF00152 tRNA synthetases class II (D, K and N) CJP42_RS15545 PF00155 Aminotransferase class I and II CJP42_RS15550 PF00753 Metallo-beta-lactamase superfamily CJP42_RS15555 PF05951 Bacterial protein of unknown function (DUF882) CJP42_RS15565 PF01471 Putative peptidoglycan binding domain CJP42_RS15565 PF03734 L,D-transpeptidase catalytic domain CJP42_RS15570 PF16330 MukB hinge domain CJP42_RS15570 PF04310 MukB N-terminal CJP42_RS15575 PF04288 MukE-like family CJP42_RS15580 PF17193 MukF C-terminal domain CJP42_RS15580 PF17192 MukF middle domain CJP42_RS15580 PF03882 MukF winged-helix domain CJP42_RS15585 PF13847 Methyltransferase domain CJP42_RS15590 PF02698 DUF218 domain CJP42_RS15595 PF01636 Phosphotransferase enzyme family CJP42_RS15600 PF02348 Cytidylyltransferase CJP42_RS15605 PF03966 Trm112p-like protein CJP42_RS15615 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CJP42_RS15620 PF00005 ABC transporter CJP42_RS15620 PF00664 ABC transporter transmembrane region CJP42_RS15625 PF00753 Metallo-beta-lactamase superfamily CJP42_RS15625 PF03772 Competence protein CJP42_RS15630 PF00216 Bacterial DNA-binding protein CJP42_RS15635 PF00575 S1 RNA binding domain CJP42_RS15640 PF02224 Cytidylate kinase CJP42_RS15650 PF01435 Peptidase family M48 CJP42_RS15655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJP42_RS15660 PF00266 Aminotransferase class-V CJP42_RS15665 PF04239 Protein of unknown function (DUF421) CJP42_RS15670 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CJP42_RS15670 PF18381 YcaO cyclodehydratase C-terminal domain CJP42_RS15675 PF01226 Formate/nitrite transporter CJP42_RS15680 PF01228 Glycine radical CJP42_RS15680 PF02901 Pyruvate formate lyase-like CJP42_RS15695 PF04055 Radical SAM superfamily CJP42_RS15700 PF13520 Amino acid permease CJP42_RS15705 PF07690 Major Facilitator Superfamily CJP42_RS15710 PF04976 DMSO reductase anchor subunit (DmsC) CJP42_RS15715 PF13247 4Fe-4S dicluster domain CJP42_RS15715 PF12800 4Fe-4S binding domain CJP42_RS15720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJP42_RS15720 PF00384 Molybdopterin oxidoreductase CJP42_RS15720 PF01568 Molydopterin dinucleotide binding domain CJP42_RS15725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJP42_RS15725 PF02403 Seryl-tRNA synthetase N-terminal domain CJP42_RS15730 PF16193 AAA C-terminal domain CJP42_RS15730 PF12002 MgsA AAA+ ATPase C terminal CJP42_RS15730 PF00004 ATPase family associated with various cellular activities (AAA) CJP42_RS15735 PF03548 Outer membrane lipoprotein carrier protein LolA CJP42_RS15740 PF01580 FtsK/SpoIIIE family CJP42_RS15740 PF17854 FtsK alpha domain CJP42_RS15740 PF09397 Ftsk gamma domain CJP42_RS15740 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJP42_RS15745 PF01037 Lrp/AsnC ligand binding domain CJP42_RS15755 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS15760 PF00005 ABC transporter CJP42_RS15760 PF00664 ABC transporter transmembrane region CJP42_RS15765 PF00005 ABC transporter CJP42_RS15765 PF00664 ABC transporter transmembrane region CJP42_RS15770 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CJP42_RS15780 PF01176 Translation initiation factor 1A / IF-1 CJP42_RS15785 PF03466 LysR substrate binding domain CJP42_RS15785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS15790 PF05726 Pirin C-terminal cupin domain CJP42_RS15790 PF02678 Pirin CJP42_RS15795 PF00857 Isochorismatase family CJP42_RS15820 PF07724 AAA domain (Cdc48 subfamily) CJP42_RS15820 PF00004 ATPase family associated with various cellular activities (AAA) CJP42_RS15820 PF10431 C-terminal, D2-small domain, of ClpB protein CJP42_RS15820 PF17871 AAA lid domain CJP42_RS15820 PF02861 Clp amino terminal domain, pathogenicity island component CJP42_RS15825 PF02617 ATP-dependent Clp protease adaptor protein ClpS CJP42_RS15830 PF00313 'Cold-shock' DNA-binding domain CJP42_RS15840 PF00005 ABC transporter CJP42_RS15840 PF12704 MacB-like periplasmic core domain CJP42_RS15840 PF02687 FtsX-like permease family CJP42_RS15845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJP42_RS15850 PF04393 Protein of unknown function (DUF535) CJP42_RS15855 PF11398 Protein of unknown function (DUF2813) CJP42_RS15865 PF03956 Lysine exporter LysO CJP42_RS15870 PF03063 Prismane/CO dehydrogenase family CJP42_RS15880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJP42_RS15880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJP42_RS15880 PF00205 Thiamine pyrophosphate enzyme, central domain CJP42_RS15885 PF01212 Beta-eliminating lyase CJP42_RS15890 PF13460 NAD(P)H-binding CJP42_RS15890 PF11066 Protein of unknown function (DUF2867) CJP42_RS15895 PF01370 NAD dependent epimerase/dehydratase family CJP42_RS15900 PF01510 N-acetylmuramoyl-L-alanine amidase CJP42_RS15905 PF01906 Putative heavy-metal-binding CJP42_RS15910 PF12883 Protein of unknown function (DUF3828) CJP42_RS15915 PF00005 ABC transporter CJP42_RS15920 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJP42_RS15925 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS15930 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS15935 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJP42_RS15955 PF03611 PTS system sugar-specific permease component CJP42_RS15965 PF05958 tRNA (Uracil-5-)-methyltransferase CJP42_RS15970 PF10767 Protein of unknown function (DUF2593) CJP42_RS15975 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS15980 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS15985 PF08402 TOBE domain CJP42_RS15985 PF00005 ABC transporter CJP42_RS15990 PF13416 Bacterial extracellular solute-binding protein CJP42_RS15995 PF10722 Putative bacterial sensory transduction regulator CJP42_RS16000 PF18030 RimK PreATP-grasp domain CJP42_RS16000 PF08443 RimK-like ATP-grasp domain CJP42_RS16005 PF00881 Nitroreductase family CJP42_RS16010 PF07214 Protein of unknown function (DUF1418) CJP42_RS16015 PF00462 Glutaredoxin CJP42_RS16020 PF11045 Putative inner membrane protein of Enterobacteriaceae CJP42_RS16030 PF02080 TrkA-C domain CJP42_RS16030 PF06826 Predicted Permease Membrane Region CJP42_RS16040 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS16045 PF07690 Major Facilitator Superfamily CJP42_RS16055 PF07690 Major Facilitator Superfamily CJP42_RS16060 PF01569 PAP2 superfamily CJP42_RS16065 PF08220 DeoR-like helix-turn-helix domain CJP42_RS16065 PF00455 DeoR C terminal sensor domain CJP42_RS16070 PF00768 D-alanyl-D-alanine carboxypeptidase CJP42_RS16070 PF07943 Penicillin-binding protein 5, C-terminal domain CJP42_RS16075 PF13417 Glutathione S-transferase, N-terminal domain CJP42_RS16075 PF00043 Glutathione S-transferase, C-terminal domain CJP42_RS16080 PF07995 Glucose / Sorbosone dehydrogenase CJP42_RS16085 PF10799 Biofilm formation protein (YliH/bssR) CJP42_RS16090 PF04055 Radical SAM superfamily CJP42_RS16090 PF00919 Uncharacterized protein family UPF0004 CJP42_RS16090 PF18693 TRAM domain CJP42_RS16095 PF12911 N-terminal TM domain of oligopeptide transport permease C CJP42_RS16095 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS16100 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS16105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJP42_RS16110 PF00005 ABC transporter CJP42_RS16110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJP42_RS16115 PF01112 Asparaginase CJP42_RS16120 PF03454 MoeA C-terminal region (domain IV) CJP42_RS16120 PF03453 MoeA N-terminal region (domain I and II) CJP42_RS16120 PF00994 Probable molybdopterin binding domain CJP42_RS16125 PF00899 ThiF family CJP42_RS16130 PF04055 Radical SAM superfamily CJP42_RS16135 PF01228 Glycine radical CJP42_RS16135 PF02901 Pyruvate formate lyase-like CJP42_RS16145 PF07350 Protein of unknown function (DUF1479) CJP42_RS16150 PF00005 ABC transporter CJP42_RS16150 PF12848 ABC transporter CJP42_RS16155 PF17969 L,D-transpeptidase C-terminal domain CJP42_RS16155 PF03734 L,D-transpeptidase catalytic domain CJP42_RS16160 PF03600 Citrate transporter CJP42_RS16165 PF01325 Iron dependent repressor, N-terminal DNA binding domain CJP42_RS16165 PF02742 Iron dependent repressor, metal binding and dimerisation domain CJP42_RS16175 PF00884 Sulfatase CJP42_RS16190 PF13505 Outer membrane protein beta-barrel domain CJP42_RS16195 PF00892 EamA-like transporter family CJP42_RS16200 PF00210 Ferritin-like domain CJP42_RS16205 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJP42_RS16210 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS16215 PF00005 ABC transporter CJP42_RS16220 PF00924 Mechanosensitive ion channel CJP42_RS16230 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJP42_RS16235 PF07338 Protein of unknown function (DUF1471) CJP42_RS16250 PF00271 Helicase conserved C-terminal domain CJP42_RS16250 PF00270 DEAD/DEAH box helicase CJP42_RS16255 PF09209 Tetracyclin repressor-like, C-terminal domain CJP42_RS16255 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS16260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJP42_RS16265 PF00005 ABC transporter CJP42_RS16280 PF11076 Putative inner membrane protein YbhQ CJP42_RS16285 PF03372 Endonuclease/Exonuclease/phosphatase family CJP42_RS16290 PF13091 PLD-like domain CJP42_RS16295 PF03706 Lysylphosphatidylglycerol synthase TM region CJP42_RS16325 PF02391 MoaE protein CJP42_RS16330 PF02597 ThiS family CJP42_RS16335 PF01967 MoaC family CJP42_RS16340 PF00994 Probable molybdopterin binding domain CJP42_RS16345 PF04055 Radical SAM superfamily CJP42_RS16345 PF06463 Molybdenum Cofactor Synthesis C CJP42_RS16350 PF01933 Uncharacterised protein family UPF0052 CJP42_RS16365 PF17757 UvrB interaction domain CJP42_RS16365 PF02151 UvrB/uvrC motif CJP42_RS16365 PF00271 Helicase conserved C-terminal domain CJP42_RS16365 PF04851 Type III restriction enzyme, res subunit CJP42_RS16365 PF12344 Ultra-violet resistance protein B CJP42_RS16380 PF08241 Methyltransferase domain CJP42_RS16385 PF00155 Aminotransferase class I and II CJP42_RS16390 PF06968 Biotin and Thiamin Synthesis associated domain CJP42_RS16390 PF04055 Radical SAM superfamily CJP42_RS16395 PF00202 Aminotransferase class-III CJP42_RS16400 PF01161 Phosphatidylethanolamine-binding protein CJP42_RS16405 PF00221 Aromatic amino acid lyase CJP42_RS16410 PF01175 Urocanase Rossmann-like domain CJP42_RS16410 PF17392 Urocanase C-terminal domain CJP42_RS16410 PF17391 Urocanase N-terminal domain CJP42_RS16415 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS16415 PF07702 UTRA domain CJP42_RS16420 PF00491 Arginase family CJP42_RS16425 PF01979 Amidohydrolase family CJP42_RS16430 PF01095 Pectinesterase CJP42_RS16435 PF10282 Lactonase, 7-bladed beta-propeller CJP42_RS16445 PF03459 TOBE domain CJP42_RS16445 PF00005 ABC transporter CJP42_RS16450 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS16460 PF10766 Multidrug efflux pump-associated protein AcrZ CJP42_RS16465 PF03459 TOBE domain CJP42_RS16465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS16470 PF00005 ABC transporter CJP42_RS16485 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CJP42_RS16485 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CJP42_RS16490 PF08544 GHMP kinases C terminal CJP42_RS16490 PF00288 GHMP kinases N terminal domain CJP42_RS16490 PF10509 Galactokinase galactose-binding signature CJP42_RS16495 PF01263 Aldose 1-epimerase CJP42_RS16505 PF00300 Histidine phosphatase superfamily (branch 1) CJP42_RS16510 PF00005 ABC transporter CJP42_RS16515 PF01032 FecCD transport family CJP42_RS16520 PF00793 DAHP synthetase I family CJP42_RS16525 PF13985 YbgS-like protein CJP42_RS16530 PF01545 Cation efflux family CJP42_RS16535 PF04973 Nicotinamide mononucleotide transporter CJP42_RS16540 PF02445 Quinolinate synthetase A protein CJP42_RS16560 PF13174 Tetratricopeptide repeat CJP42_RS16560 PF16331 TolA binding protein trimerisation CJP42_RS16565 PF00691 OmpA family CJP42_RS16570 PF07676 WD40-like Beta Propeller Repeat CJP42_RS16570 PF04052 TolB amino-terminal domain CJP42_RS16575 PF06519 TolA C-terminal CJP42_RS16580 PF02472 Biopolymer transport protein ExbD/TolR CJP42_RS16585 PF01618 MotA/TolQ/ExbB proton channel family CJP42_RS16590 PF03061 Thioesterase superfamily CJP42_RS16595 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CJP42_RS16605 PF08173 Membrane bound YbgT-like protein CJP42_RS16610 PF02322 Cytochrome bd terminal oxidase subunit II CJP42_RS16615 PF01654 Cytochrome bd terminal oxidase subunit I CJP42_RS16620 PF02629 CoA binding domain CJP42_RS16620 PF00549 CoA-ligase CJP42_RS16625 PF08442 ATP-grasp domain CJP42_RS16625 PF00549 CoA-ligase CJP42_RS16630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJP42_RS16630 PF00364 Biotin-requiring enzyme CJP42_RS16630 PF02817 e3 binding domain CJP42_RS16635 PF02779 Transketolase, pyrimidine binding domain CJP42_RS16635 PF16870 2-oxoglutarate dehydrogenase C-terminal CJP42_RS16635 PF00676 Dehydrogenase E1 component CJP42_RS16635 PF16078 2-oxoglutarate dehydrogenase N-terminus CJP42_RS16640 PF13085 2Fe-2S iron-sulfur cluster binding domain CJP42_RS16645 PF00890 FAD binding domain CJP42_RS16645 PF02910 Fumarate reductase flavoprotein C-term CJP42_RS16650 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJP42_RS16655 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJP42_RS16670 PF00285 Citrate synthase, C-terminal domain CJP42_RS16675 PF05145 Transition state regulatory protein AbrB CJP42_RS16680 PF06827 Zinc finger found in FPG and IleRS CJP42_RS16680 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJP42_RS16680 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJP42_RS16705 PF00005 ABC transporter CJP42_RS16725 PF03275 UDP-galactopyranose mutase CJP42_RS16740 PF00589 Phage integrase family CJP42_RS16750 PF03746 LamB/YcsF family CJP42_RS16755 PF02626 Carboxyltransferase domain, subdomain A and B CJP42_RS16760 PF02682 Carboxyltransferase domain, subdomain C and D CJP42_RS16765 PF01784 NIF3 (NGG1p interacting factor 3) CJP42_RS16775 PF00854 POT family CJP42_RS16780 PF00875 DNA photolyase CJP42_RS16780 PF03441 FAD binding domain of DNA photolyase CJP42_RS16785 PF10725 Protein of unknown function (DUF2517) CJP42_RS16790 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CJP42_RS16795 PF03814 Potassium-transporting ATPase A subunit CJP42_RS16805 PF02669 K+-transporting ATPase, c chain CJP42_RS16810 PF02702 Osmosensitive K+ channel His kinase sensor domain CJP42_RS16810 PF13492 GAF domain CJP42_RS16810 PF13493 Domain of unknown function (DUF4118) CJP42_RS16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS16810 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS16815 PF00072 Response regulator receiver domain CJP42_RS16815 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS16830 PF13520 Amino acid permease CJP42_RS16840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJP42_RS16840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJP42_RS16840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJP42_RS16840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJP42_RS16845 PF17206 SeqA protein N-terminal domain CJP42_RS16845 PF03925 SeqA protein C-terminal domain CJP42_RS16850 PF12697 Alpha/beta hydrolase family CJP42_RS16855 PF01402 Ribbon-helix-helix protein, copG family CJP42_RS16860 PF00258 Flavodoxin CJP42_RS16865 PF01475 Ferric uptake regulator family CJP42_RS16870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS16870 PF03466 LysR substrate binding domain CJP42_RS16875 PF14537 Cytochrome c3 CJP42_RS16875 PF00890 FAD binding domain CJP42_RS16885 PF07690 Major Facilitator Superfamily CJP42_RS16890 PF13982 YbfN-like lipoprotein CJP42_RS16895 PF03573 outer membrane porin, OprD family CJP42_RS16905 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CJP42_RS16905 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJP42_RS16910 PF00367 phosphotransferase system, EIIB CJP42_RS16910 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CJP42_RS16910 PF02378 Phosphotransferase system, EIIC CJP42_RS16915 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CJP42_RS16920 PF01979 Amidohydrolase family CJP42_RS16925 PF00480 ROK family CJP42_RS16925 PF01047 MarR family CJP42_RS16930 PF13344 Haloacid dehalogenase-like hydrolase CJP42_RS16935 PF13537 Glutamine amidotransferase domain CJP42_RS16935 PF00733 Asparagine synthase CJP42_RS16970 PF01494 FAD binding domain CJP42_RS16975 PF01938 TRAM domain CJP42_RS16975 PF00919 Uncharacterized protein family UPF0004 CJP42_RS16975 PF04055 Radical SAM superfamily CJP42_RS16980 PF02562 PhoH-like protein CJP42_RS16985 PF02130 Uncharacterized protein family UPF0054 CJP42_RS16990 PF00571 CBS domain CJP42_RS16990 PF03471 Transporter associated domain CJP42_RS16995 PF00795 Carbon-nitrogen hydrolase CJP42_RS17000 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJP42_RS17005 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS17010 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS17015 PF00005 ABC transporter CJP42_RS17020 PF01156 Inosine-uridine preferring nucleoside hydrolase CJP42_RS17030 PF07295 Zinc-ribbon containing domain CJP42_RS17035 PF00158 Sigma-54 interaction domain CJP42_RS17035 PF02954 Bacterial regulatory protein, Fis family CJP42_RS17035 PF00989 PAS fold CJP42_RS17040 PF03812 2-keto-3-deoxygluconate permease CJP42_RS17045 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CJP42_RS17055 PF08264 Anticodon-binding domain of tRNA CJP42_RS17055 PF13603 Leucyl-tRNA synthetase, Domain 2 CJP42_RS17055 PF00133 tRNA synthetases class I (I, L, M and V) CJP42_RS17060 PF04390 Lipopolysaccharide-assembly CJP42_RS17065 PF06144 DNA polymerase III, delta subunit CJP42_RS17065 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CJP42_RS17070 PF01467 Cytidylyltransferase-like CJP42_RS17075 PF00155 Aminotransferase class I and II CJP42_RS17080 PF00300 Histidine phosphatase superfamily (branch 1) CJP42_RS17090 PF02590 Predicted SPOUT methyltransferase CJP42_RS17095 PF00905 Penicillin binding protein transpeptidase domain CJP42_RS17095 PF03717 Penicillin-binding Protein dimerisation domain CJP42_RS17100 PF01098 Cell cycle protein CJP42_RS17105 PF03330 Lytic transglycolase CJP42_RS17105 PF05036 Sporulation related domain CJP42_RS17110 PF07943 Penicillin-binding protein 5, C-terminal domain CJP42_RS17110 PF00768 D-alanyl-D-alanine carboxypeptidase CJP42_RS17115 PF04359 Protein of unknown function (DUF493) CJP42_RS17120 PF03099 Biotin/lipoate A/B protein ligase family CJP42_RS17125 PF03466 LysR substrate binding domain CJP42_RS17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS17130 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CJP42_RS17130 PF04055 Radical SAM superfamily CJP42_RS17135 PF02416 mttA/Hcf106 family CJP42_RS17145 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJP42_RS17150 PF00313 'Cold-shock' DNA-binding domain CJP42_RS17155 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CJP42_RS17165 PF03606 C4-dicarboxylate anaerobic carrier CJP42_RS17170 PF12431 Transcriptional regulator CJP42_RS17170 PF00072 Response regulator receiver domain CJP42_RS17175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS17175 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CJP42_RS17175 PF00989 PAS fold CJP42_RS17175 PF17203 Single cache domain 3 CJP42_RS17185 PF08218 Citrate lyase ligase C-terminal domain CJP42_RS17190 PF06857 Malonate decarboxylase delta subunit (MdcD) CJP42_RS17195 PF03328 HpcH/HpaI aldolase/citrate lyase family CJP42_RS17200 PF04223 Citrate lyase, alpha subunit (CitF) CJP42_RS17205 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CJP42_RS17210 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CJP42_RS17215 PF00939 Sodium:sulfate symporter transmembrane region CJP42_RS17220 PF00445 Ribonuclease T2 family CJP42_RS17230 PF14760 Rnk N-terminus CJP42_RS17230 PF01272 Transcription elongation factor, GreA/GreB, C-term CJP42_RS17235 PF08240 Alcohol dehydrogenase GroES-like domain CJP42_RS17235 PF00107 Zinc-binding dehydrogenase CJP42_RS17235 PF13823 Alcohol dehydrogenase GroES-associated CJP42_RS17245 PF00582 Universal stress protein family CJP42_RS17255 PF13247 4Fe-4S dicluster domain CJP42_RS17260 PF01568 Molydopterin dinucleotide binding domain CJP42_RS17260 PF00384 Molybdopterin oxidoreductase CJP42_RS17260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJP42_RS17270 PF01797 Transposase IS200 like CJP42_RS17280 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS17280 PF13192 Thioredoxin domain CJP42_RS17285 PF00578 AhpC/TSA family CJP42_RS17285 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJP42_RS17290 PF13098 Thioredoxin-like domain CJP42_RS17300 PF03466 LysR substrate binding domain CJP42_RS17300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS17305 PF11922 Domain of unknown function (DUF3440) CJP42_RS17305 PF01507 Phosphoadenosine phosphosulfate reductase family CJP42_RS17310 PF02195 ParB-like nuclease domain CJP42_RS17315 PF00155 Aminotransferase class I and II CJP42_RS17320 PF00465 Iron-containing alcohol dehydrogenase CJP42_RS17325 PF04328 Selenoprotein, putative CJP42_RS17330 PF02554 Carbon starvation protein CstA CJP42_RS17330 PF13722 5TM C-terminal transporter carbon starvation CstA CJP42_RS17335 PF03061 Thioesterase superfamily CJP42_RS17345 PF00857 Isochorismatase family CJP42_RS17345 PF00550 Phosphopantetheine attachment site CJP42_RS17350 PF13193 AMP-binding enzyme C-terminal domain CJP42_RS17350 PF00501 AMP-binding enzyme CJP42_RS17355 PF00425 chorismate binding enzyme CJP42_RS17360 PF01497 Periplasmic binding protein CJP42_RS17365 PF05977 Transmembrane secretion effector CJP42_RS17370 PF01032 FecCD transport family CJP42_RS17375 PF01032 FecCD transport family CJP42_RS17380 PF00005 ABC transporter CJP42_RS17390 PF00501 AMP-binding enzyme CJP42_RS17390 PF13193 AMP-binding enzyme C-terminal domain CJP42_RS17390 PF00975 Thioesterase domain CJP42_RS17390 PF00668 Condensation domain CJP42_RS17390 PF00550 Phosphopantetheine attachment site CJP42_RS17395 PF03621 MbtH-like protein CJP42_RS17400 PF00756 Putative esterase CJP42_RS17400 PF11806 Domain of unknown function (DUF3327) CJP42_RS17405 PF00593 TonB dependent receptor CJP42_RS17405 PF07715 TonB-dependent Receptor Plug Domain CJP42_RS17410 PF01648 4'-phosphopantetheinyl transferase superfamily CJP42_RS17410 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CJP42_RS17415 PF04107 Glutamate-cysteine ligase family 2(GCS2) CJP42_RS17420 PF06643 Protein of unknown function (DUF1158) CJP42_RS17425 PF12833 Helix-turn-helix domain CJP42_RS17430 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS17430 PF16295 Tetracyclin repressor-like, C-terminal domain CJP42_RS17435 PF04237 YjbR CJP42_RS17440 PF00881 Nitroreductase family CJP42_RS17450 PF03797 Autotransporter beta-domain CJP42_RS17450 PF00657 GDSL-like Lipase/Acylhydrolase CJP42_RS17460 PF00924 Mechanosensitive ion channel CJP42_RS17465 PF00324 Amino acid permease CJP42_RS17475 PF04224 Protein of unknown function, DUF417 CJP42_RS17480 PF07338 Protein of unknown function (DUF1471) CJP42_RS17490 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS17490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJP42_RS17495 PF12852 Cupin CJP42_RS17495 PF12833 Helix-turn-helix domain CJP42_RS17515 PF04138 GtrA-like protein CJP42_RS17520 PF00535 Glycosyl transferase family 2 CJP42_RS17535 PF00589 Phage integrase family CJP42_RS17550 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS17565 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS17565 PF00072 Response regulator receiver domain CJP42_RS17570 PF00419 Fimbrial protein CJP42_RS17575 PF00419 Fimbrial protein CJP42_RS17580 PF13953 PapC C-terminal domain CJP42_RS17580 PF13954 PapC N-terminal domain CJP42_RS17580 PF00577 Outer membrane usher protein CJP42_RS17585 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS17585 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS17595 PF00419 Fimbrial protein CJP42_RS17605 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJP42_RS17605 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJP42_RS17615 PF04307 LexA-binding, inner membrane-associated putative hydrolase CJP42_RS17620 PF09190 DALR domain CJP42_RS17620 PF01406 tRNA synthetases class I (C) catalytic domain CJP42_RS17625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJP42_RS17630 PF12850 Calcineurin-like phosphoesterase superfamily domain CJP42_RS17640 PF00731 AIR carboxylase CJP42_RS17645 PF02222 ATP-grasp domain CJP42_RS17645 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CJP42_RS17650 PF00696 Amino acid kinase family CJP42_RS17655 PF11392 Protein of unknown function (DUF2877) CJP42_RS17660 PF06545 Protein of unknown function (DUF1116) CJP42_RS17665 PF00549 CoA-ligase CJP42_RS17665 PF02629 CoA binding domain CJP42_RS17670 PF02615 Malate/L-lactate dehydrogenase CJP42_RS17675 PF01546 Peptidase family M20/M25/M40 CJP42_RS17680 PF07883 Cupin domain CJP42_RS17680 PF05899 Protein of unknown function (DUF861) CJP42_RS17685 PF02595 Glycerate kinase family CJP42_RS17690 PF00860 Permease family CJP42_RS17695 PF01979 Amidohydrolase family CJP42_RS17710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJP42_RS17710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJP42_RS17715 PF01261 Xylose isomerase-like TIM barrel CJP42_RS17720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJP42_RS17720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJP42_RS17720 PF00205 Thiamine pyrophosphate enzyme, central domain CJP42_RS17725 PF09339 IclR helix-turn-helix domain CJP42_RS17725 PF01614 Bacterial transcriptional regulator CJP42_RS17735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS17735 PF03466 LysR substrate binding domain CJP42_RS17745 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS17750 PF09383 NIL domain CJP42_RS17750 PF00005 ABC transporter CJP42_RS17755 PF03180 NLPA lipoprotein CJP42_RS17770 PF00005 ABC transporter CJP42_RS17775 PF13472 GDSL-like Lipase/Acylhydrolase family CJP42_RS17780 PF00106 short chain dehydrogenase CJP42_RS17785 PF00085 Thioredoxin CJP42_RS17790 PF03649 Uncharacterised protein family (UPF0014) CJP42_RS17795 PF00005 ABC transporter CJP42_RS17800 PF01145 SPFH domain / Band 7 family CJP42_RS17800 PF16200 C-terminal region of band_7 CJP42_RS17805 PF01957 NfeD-like C-terminal, partner-binding CJP42_RS17810 PF13411 MerR HTH family regulatory protein CJP42_RS17815 PF00403 Heavy-metal-associated domain CJP42_RS17830 PF01963 TraB family CJP42_RS17835 PF04073 Aminoacyl-tRNA editing domain CJP42_RS17840 PF02872 5'-nucleotidase, C-terminal domain CJP42_RS17840 PF00149 Calcineurin-like phosphoesterase CJP42_RS17845 PF02872 5'-nucleotidase, C-terminal domain CJP42_RS17845 PF00149 Calcineurin-like phosphoesterase CJP42_RS17850 PF07690 Major Facilitator Superfamily CJP42_RS17855 PF00999 Sodium/hydrogen exchanger family CJP42_RS17855 PF02254 TrkA-N domain CJP42_RS17860 PF00294 pfkB family carbohydrate kinase CJP42_RS17865 PF07859 alpha/beta hydrolase fold CJP42_RS17870 PF00762 Ferrochelatase CJP42_RS17875 PF05191 Adenylate kinase, active site lid CJP42_RS17885 PF00183 Hsp90 protein CJP42_RS17885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS17890 PF02132 RecR protein CJP42_RS17890 PF13662 Toprim domain CJP42_RS17895 PF02575 YbaB/EbfC DNA-binding family CJP42_RS17900 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CJP42_RS17900 PF12170 DNA polymerase III tau subunit V interacting with alpha CJP42_RS17900 PF12169 DNA polymerase III subunits gamma and tau domain III CJP42_RS17905 PF00156 Phosphoribosyl transferase domain CJP42_RS17915 PF04304 Protein of unknown function (DUF454) CJP42_RS17925 PF10689 Protein of unknown function (DUF2496) CJP42_RS17930 PF04754 Putative transposase, YhgA-like CJP42_RS17935 PF12794 Mechanosensitive ion channel inner membrane domain 1 CJP42_RS17935 PF12795 Mechanosensitive ion channel porin domain CJP42_RS17935 PF00924 Mechanosensitive ion channel CJP42_RS17940 PF08361 MAATS-type transcriptional repressor, C-terminal region CJP42_RS17940 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS17945 PF00529 HlyD membrane-fusion protein of T1SS CJP42_RS17945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJP42_RS17950 PF00873 AcrB/AcrD/AcrF family CJP42_RS17955 PF10757 Biofilm formation regulator YbaJ CJP42_RS17960 PF05321 Haemolysin expression modulating protein CJP42_RS17965 PF14602 Hexapeptide repeat of succinyl-transferase CJP42_RS17965 PF12464 Maltose acetyltransferase CJP42_RS17970 PF10777 Inner membrane protein YlaC CJP42_RS17975 PF00444 Ribosomal protein L36 CJP42_RS17980 PF01197 Ribosomal protein L31 CJP42_RS17985 PF12792 CSS motif domain associated with EAL CJP42_RS17985 PF00563 EAL domain CJP42_RS17995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJP42_RS18000 PF09619 Type III secretion system lipoprotein chaperone (YscW) CJP42_RS18010 PF00909 Ammonium Transporter Family CJP42_RS18015 PF00543 Nitrogen regulatory protein P-II CJP42_RS18020 PF00664 ABC transporter transmembrane region CJP42_RS18020 PF00005 ABC transporter CJP42_RS18025 PF00664 ABC transporter transmembrane region CJP42_RS18025 PF00005 ABC transporter CJP42_RS18030 PF01037 Lrp/AsnC ligand binding domain CJP42_RS18030 PF13404 AsnC-type helix-turn-helix domain CJP42_RS18055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJP42_RS18055 PF12793 Sugar transport-related sRNA regulator N-term CJP42_RS18060 PF06508 Queuosine biosynthesis protein QueC CJP42_RS18075 PF13145 PPIC-type PPIASE domain CJP42_RS18080 PF00216 Bacterial DNA-binding protein CJP42_RS18085 PF05362 Lon protease (S16) C-terminal proteolytic domain CJP42_RS18085 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJP42_RS18085 PF00004 ATPase family associated with various cellular activities (AAA) CJP42_RS18090 PF10431 C-terminal, D2-small domain, of ClpB protein CJP42_RS18090 PF07724 AAA domain (Cdc48 subfamily) CJP42_RS18090 PF06689 ClpX C4-type zinc finger CJP42_RS18095 PF00574 Clp protease CJP42_RS18100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJP42_RS18100 PF05698 Bacterial trigger factor protein (TF) C-terminus CJP42_RS18100 PF05697 Bacterial trigger factor protein (TF) CJP42_RS18115 PF01722 BolA-like protein CJP42_RS18125 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CJP42_RS18125 PF03923 Uncharacterized lipoprotein CJP42_RS18130 PF07690 Major Facilitator Superfamily CJP42_RS18135 PF06481 COX Aromatic Rich Motif CJP42_RS18135 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJP42_RS18140 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJP42_RS18145 PF00510 Cytochrome c oxidase subunit III CJP42_RS18150 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CJP42_RS18155 PF01040 UbiA prenyltransferase family CJP42_RS18185 PF07690 Major Facilitator Superfamily CJP42_RS18190 PF04461 Protein of unknown function (DUF520) CJP42_RS18195 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJP42_RS18195 PF02558 Ketopantoate reductase PanE/ApbA CJP42_RS18200 PF01965 DJ-1/PfpI family CJP42_RS18210 PF00266 Aminotransferase class-V CJP42_RS18215 PF07702 UTRA domain CJP42_RS18215 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS18220 PF01547 Bacterial extracellular solute-binding protein CJP42_RS18225 PF08402 TOBE domain CJP42_RS18225 PF00005 ABC transporter CJP42_RS18230 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS18235 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS18240 PF02568 Thiamine biosynthesis protein (ThiI) CJP42_RS18240 PF02926 THUMP domain CJP42_RS18245 PF02609 Exonuclease VII small subunit CJP42_RS18250 PF00348 Polyprenyl synthetase CJP42_RS18255 PF02780 Transketolase, C-terminal domain CJP42_RS18255 PF02779 Transketolase, pyrimidine binding domain CJP42_RS18255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJP42_RS18260 PF00248 Aldo/keto reductase family CJP42_RS18265 PF04608 Phosphatidylglycerophosphatase A CJP42_RS18270 PF00586 AIR synthase related protein, N-terminal domain CJP42_RS18270 PF02769 AIR synthase related protein, C-terminal domain CJP42_RS18275 PF01029 NusB family CJP42_RS18280 PF00885 6,7-dimethyl-8-ribityllumazine synthase CJP42_RS18285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJP42_RS18285 PF01872 RibD C-terminal domain CJP42_RS18290 PF03477 ATP cone domain CJP42_RS18295 PF11622 Protein of unknown function (DUF3251) CJP42_RS18300 PF03502 Nucleoside-specific channel-forming protein, Tsx CJP42_RS18315 PF01844 HNH endonuclease CJP42_RS18330 PF02355 Protein export membrane protein CJP42_RS18330 PF07549 SecD/SecF GG Motif CJP42_RS18335 PF02355 Protein export membrane protein CJP42_RS18335 PF13721 SecD export protein N-terminal TM region CJP42_RS18335 PF07549 SecD/SecF GG Motif CJP42_RS18340 PF02699 Preprotein translocase subunit CJP42_RS18345 PF01702 Queuine tRNA-ribosyltransferase CJP42_RS18355 PF02547 Queuosine biosynthesis protein CJP42_RS18360 PF04336 Acyl carrier protein phosphodiesterase CJP42_RS18365 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJP42_RS18365 PF00578 AhpC/TSA family CJP42_RS18370 PF00128 Alpha amylase, catalytic domain CJP42_RS18370 PF02903 Alpha amylase, N-terminal ig-like domain CJP42_RS18375 PF00324 Amino acid permease CJP42_RS18380 PF01797 Transposase IS200 like CJP42_RS18390 PF05525 Branched-chain amino acid transport protein CJP42_RS18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS18400 PF00989 PAS fold CJP42_RS18400 PF11808 Phosphate regulon sensor protein PhoR CJP42_RS18400 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS18405 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS18405 PF00072 Response regulator receiver domain CJP42_RS18410 PF00149 Calcineurin-like phosphoesterase CJP42_RS18410 PF12320 Type 5 capsule protein repressor C-terminal domain CJP42_RS18415 PF13476 AAA domain CJP42_RS18425 PF00480 ROK family CJP42_RS18430 PF04381 Putative exonuclease, RdgC CJP42_RS18435 PF06865 Pyrimidine/purine nucleoside phosphorylase CJP42_RS18445 PF16362 YaiA protein CJP42_RS18450 PF01202 Shikimate kinase CJP42_RS18455 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CJP42_RS18460 PF03807 NADP oxidoreductase coenzyme F420-dependent CJP42_RS18460 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJP42_RS18465 PF05230 MASE2 domain CJP42_RS18465 PF00990 Diguanylate cyclase, GGDEF domain CJP42_RS18470 PF07769 psiF repeat CJP42_RS18475 PF10796 Sigma-S stabilisation anti-adaptor protein CJP42_RS18480 PF07690 Major Facilitator Superfamily CJP42_RS18490 PF07478 D-ala D-ala ligase C-terminus CJP42_RS18490 PF01820 D-ala D-ala ligase N-terminus CJP42_RS18495 PF10953 Protein of unknown function (DUF2754) CJP42_RS18500 PF10954 Protein of unknown function (DUF2755) CJP42_RS18505 PF07759 Protein of unknown function (DUF1615) CJP42_RS18510 PF05992 SbmA/BacA-like family CJP42_RS18520 PF00144 Beta-lactamase CJP42_RS18525 PF15977 Winged helix-turn-helix DNA binding CJP42_RS18530 PF03797 Autotransporter beta-domain CJP42_RS18535 PF00490 Delta-aminolevulinic acid dehydratase CJP42_RS18540 PF00501 AMP-binding enzyme CJP42_RS18540 PF13193 AMP-binding enzyme C-terminal domain CJP42_RS18540 PF16177 Acetyl-coenzyme A synthetase N-terminus CJP42_RS18545 PF03972 MmgE/PrpD family CJP42_RS18550 PF00285 Citrate synthase, C-terminal domain CJP42_RS18560 PF00158 Sigma-54 interaction domain CJP42_RS18560 PF06506 Propionate catabolism activator CJP42_RS18560 PF02954 Bacterial regulatory protein, Fis family CJP42_RS18565 PF07338 Protein of unknown function (DUF1471) CJP42_RS18570 PF01810 LysE type translocator CJP42_RS18575 PF07715 TonB-dependent Receptor Plug Domain CJP42_RS18575 PF00593 TonB dependent receptor CJP42_RS18590 PF02322 Cytochrome bd terminal oxidase subunit II CJP42_RS18595 PF01654 Cytochrome bd terminal oxidase subunit I CJP42_RS18615 PF07690 Major Facilitator Superfamily CJP42_RS18625 PF02321 Outer membrane efflux protein CJP42_RS18645 PF13505 Outer membrane protein beta-barrel domain CJP42_RS18660 PF12792 CSS motif domain associated with EAL CJP42_RS18660 PF00563 EAL domain CJP42_RS18685 PF16970 Type-1 fimbrial protein, A CJP42_RS18690 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS18690 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS18705 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS18705 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS18720 PF00171 Aldehyde dehydrogenase family CJP42_RS18725 PF00696 Amino acid kinase family CJP42_RS18725 PF01472 PUA domain CJP42_RS18730 PF00267 Gram-negative porin CJP42_RS18735 PF07417 Sigma factor-binding transcriptional regulator Crl CJP42_RS18740 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CJP42_RS18745 PF00156 Phosphoribosyl transferase domain CJP42_RS18750 PF01546 Peptidase family M20/M25/M40 CJP42_RS18750 PF07687 Peptidase dimerisation domain CJP42_RS18755 PF00472 RF-1 domain CJP42_RS18765 PF11798 IMS family HHH motif CJP42_RS18765 PF11799 impB/mucB/samB family C-terminal domain CJP42_RS18765 PF00817 impB/mucB/samB family CJP42_RS18770 PF03734 L,D-transpeptidase catalytic domain CJP42_RS18775 PF13230 Glutamine amidotransferases class-II CJP42_RS18780 PF13580 SIS domain CJP42_RS18785 PF02770 Acyl-CoA dehydrogenase, middle domain CJP42_RS18785 PF09317 Domain of unknown function (DUF1974) CJP42_RS18785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJP42_RS18785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJP42_RS18790 PF00795 Carbon-nitrogen hydrolase CJP42_RS18800 PF13505 Outer membrane protein beta-barrel domain CJP42_RS18820 PF01037 Lrp/AsnC ligand binding domain CJP42_RS18820 PF13404 AsnC-type helix-turn-helix domain CJP42_RS18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS18865 PF03466 LysR substrate binding domain CJP42_RS18885 PF13954 PapC N-terminal domain CJP42_RS18885 PF00577 Outer membrane usher protein CJP42_RS18885 PF13953 PapC C-terminal domain CJP42_RS18890 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS18890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS18925 PF03527 RHS protein CJP42_RS18925 PF05593 RHS Repeat CJP42_RS18940 PF05593 RHS Repeat CJP42_RS18940 PF03527 RHS protein CJP42_RS18950 PF04717 Type VI secretion system, phage-baseplate injector CJP42_RS19000 PF00691 OmpA family CJP42_RS19000 PF05736 OprF membrane domain CJP42_RS19005 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CJP42_RS19035 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CJP42_RS19045 PF10431 C-terminal, D2-small domain, of ClpB protein CJP42_RS19045 PF00004 ATPase family associated with various cellular activities (AAA) CJP42_RS19045 PF17871 AAA lid domain CJP42_RS19045 PF07724 AAA domain (Cdc48 subfamily) CJP42_RS19060 PF04965 Gene 25-like lysozyme CJP42_RS19065 PF05947 Type VI secretion system, TssF CJP42_RS19085 PF00929 Exonuclease CJP42_RS19090 PF00075 RNase H CJP42_RS19095 PF08241 Methyltransferase domain CJP42_RS19100 PF00753 Metallo-beta-lactamase superfamily CJP42_RS19100 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJP42_RS19105 PF01464 Transglycosylase SLT domain CJP42_RS19105 PF01476 LysM domain CJP42_RS19110 PF08241 Methyltransferase domain CJP42_RS19115 PF03372 Endonuclease/Exonuclease/phosphatase family CJP42_RS19120 PF07690 Major Facilitator Superfamily CJP42_RS19125 PF03466 LysR substrate binding domain CJP42_RS19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS19130 PF00248 Aldo/keto reductase family CJP42_RS19165 PF02861 Clp amino terminal domain, pathogenicity island component CJP42_RS19165 PF17871 AAA lid domain CJP42_RS19165 PF07724 AAA domain (Cdc48 subfamily) CJP42_RS19165 PF10431 C-terminal, D2-small domain, of ClpB protein CJP42_RS19165 PF00004 ATPase family associated with various cellular activities (AAA) CJP42_RS19170 PF02578 Multi-copper polyphenol oxidoreductase laccase CJP42_RS19175 PF00849 RNA pseudouridylate synthase CJP42_RS19175 PF01479 S4 domain CJP42_RS19180 PF13525 Outer membrane lipoprotein CJP42_RS19185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJP42_RS19195 PF00800 Prephenate dehydratase CJP42_RS19195 PF01817 Chorismate mutase type II CJP42_RS19200 PF08450 SMP-30/Gluconolactonase/LRE-like region CJP42_RS19205 PF01817 Chorismate mutase type II CJP42_RS19205 PF02153 Prephenate dehydrogenase CJP42_RS19210 PF00793 DAHP synthetase I family CJP42_RS19215 PF13689 YfiR/HmsC-like CJP42_RS19220 PF00990 Diguanylate cyclase, GGDEF domain CJP42_RS19220 PF17152 Periplasmic sensor domain CJP42_RS19225 PF01245 Ribosomal protein L19 CJP42_RS19230 PF01746 tRNA (Guanine-1)-methyltransferase CJP42_RS19235 PF01782 RimM N-terminal domain CJP42_RS19235 PF05239 PRC-barrel domain CJP42_RS19240 PF00886 Ribosomal protein S16 CJP42_RS19245 PF02978 Signal peptide binding domain CJP42_RS19245 PF02881 SRP54-type protein, helical bundle domain CJP42_RS19245 PF00448 SRP54-type protein, GTPase domain CJP42_RS19250 PF01578 Cytochrome C assembly protein CJP42_RS19255 PF00571 CBS domain CJP42_RS19255 PF03471 Transporter associated domain CJP42_RS19255 PF01595 Cyclin M transmembrane N-terminal domain CJP42_RS19265 PF01025 GrpE CJP42_RS19275 PF01513 ATP-NAD kinase CJP42_RS19280 PF02463 RecF/RecN/SMC N terminal domain CJP42_RS19285 PF04355 SmpA / OmlA family CJP42_RS19290 PF03658 RnfH family Ubiquitin CJP42_RS19295 PF03364 Polyketide cyclase / dehydrase and lipid transport CJP42_RS19300 PF01668 SmpB protein CJP42_RS19315 PF00005 ABC transporter CJP42_RS19315 PF00664 ABC transporter transmembrane region CJP42_RS19320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJP42_RS19320 PF00529 HlyD membrane-fusion protein of T1SS CJP42_RS19330 PF13356 Arm DNA-binding domain CJP42_RS19330 PF00589 Phage integrase family CJP42_RS19385 PF17345 Family of unknown function (DUF5375) CJP42_RS19410 PF04606 Ogr/Delta-like zinc finger CJP42_RS19445 PF17482 Phage tail sheath C-terminal domain CJP42_RS19445 PF04984 Phage tail sheath protein subtilisin-like domain CJP42_RS19450 PF02796 Helix-turn-helix domain of resolvase CJP42_RS19450 PF00239 Resolvase, N terminal domain CJP42_RS19465 PF06722 Protein of unknown function (DUF1205) CJP42_RS19470 PF00005 ABC transporter CJP42_RS19470 PF00664 ABC transporter transmembrane region CJP42_RS19480 PF00756 Putative esterase CJP42_RS19485 PF07715 TonB-dependent Receptor Plug Domain CJP42_RS19485 PF00593 TonB dependent receptor CJP42_RS19500 PF00805 Pentapeptide repeats (8 copies) CJP42_RS19505 PF04393 Protein of unknown function (DUF535) CJP42_RS19520 PF03824 High-affinity nickel-transport protein CJP42_RS19525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS19525 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS19530 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS19530 PF00072 Response regulator receiver domain CJP42_RS19545 PF01970 Tripartite tricarboxylate transporter TctA family CJP42_RS19550 PF08943 CsiD CJP42_RS19555 PF01266 FAD dependent oxidoreductase CJP42_RS19560 PF00171 Aldehyde dehydrogenase family CJP42_RS19565 PF00202 Aminotransferase class-III CJP42_RS19575 PF07729 FCD domain CJP42_RS19575 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS19590 PF01679 Proteolipid membrane potential modulator CJP42_RS19595 PF01022 Bacterial regulatory protein, arsR family CJP42_RS19600 PF11127 Protein of unknown function (DUF2892) CJP42_RS19600 PF00581 Rhodanese-like domain CJP42_RS19605 PF00816 H-NS histone family CJP42_RS19615 PF06610 L-alanine exporter CJP42_RS19620 PF09400 Protein of unknown function (DUF2002) CJP42_RS19625 PF05957 Bacterial protein of unknown function (DUF883) CJP42_RS19635 PF02627 Carboxymuconolactone decarboxylase family CJP42_RS19645 PF00462 Glutaredoxin CJP42_RS19650 PF07972 NrdI Flavodoxin like CJP42_RS19655 PF00317 Ribonucleotide reductase, all-alpha domain CJP42_RS19655 PF02867 Ribonucleotide reductase, barrel domain CJP42_RS19655 PF08343 Ribonucleotide reductase N-terminal CJP42_RS19660 PF00268 Ribonucleotide reductase, small chain CJP42_RS19675 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS19680 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CJP42_RS19685 PF07690 Major Facilitator Superfamily CJP42_RS19690 PF01047 MarR family CJP42_RS19695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJP42_RS19695 PF00529 HlyD membrane-fusion protein of T1SS CJP42_RS19700 PF07690 Major Facilitator Superfamily CJP42_RS19710 PF02664 S-Ribosylhomocysteinase (LuxS) CJP42_RS19715 PF04262 Glutamate-cysteine ligase CJP42_RS19720 PF09335 SNARE associated Golgi protein CJP42_RS19725 PF13419 Haloacid dehalogenase-like hydrolase CJP42_RS19760 PF02599 Global regulator protein family CJP42_RS19765 PF02272 DHHA1 domain CJP42_RS19765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJP42_RS19765 PF01411 tRNA synthetases class II (A) CJP42_RS19775 PF02631 RecX family CJP42_RS19780 PF00154 recA bacterial DNA recombination protein CJP42_RS19785 PF02464 Competence-damaged protein CJP42_RS19795 PF13406 Transglycosylase SLT domain CJP42_RS19800 PF03608 PTS system enzyme II sorbitol-specific factor CJP42_RS19805 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CJP42_RS19805 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CJP42_RS19810 PF03829 PTS system glucitol/sorbitol-specific IIA component CJP42_RS19815 PF00106 short chain dehydrogenase CJP42_RS19820 PF06923 Glucitol operon activator protein (GutM) CJP42_RS19825 PF08220 DeoR-like helix-turn-helix domain CJP42_RS19825 PF00455 DeoR C terminal sensor domain CJP42_RS19830 PF01380 SIS domain CJP42_RS19830 PF00571 CBS domain CJP42_RS19835 PF01590 GAF domain CJP42_RS19835 PF00158 Sigma-54 interaction domain CJP42_RS19840 PF00258 Flavodoxin CJP42_RS19840 PF00301 Rubredoxin CJP42_RS19840 PF00753 Metallo-beta-lactamase superfamily CJP42_RS19845 PF18113 Rubredoxin binding C-terminal domain CJP42_RS19845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS19850 PF17788 HypF Kae1-like domain CJP42_RS19850 PF00708 Acylphosphatase CJP42_RS19850 PF01300 Telomere recombination CJP42_RS19850 PF07503 HypF finger CJP42_RS19855 PF12800 4Fe-4S binding domain CJP42_RS19855 PF13247 4Fe-4S dicluster domain CJP42_RS19865 PF01750 Hydrogenase maturation protease CJP42_RS19870 PF07450 Formate hydrogenlyase maturation protein HycH CJP42_RS19875 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJP42_RS19880 PF12838 4Fe-4S dicluster domain CJP42_RS19885 PF00374 Nickel-dependent hydrogenase CJP42_RS19885 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJP42_RS19885 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJP42_RS19890 PF00146 NADH dehydrogenase CJP42_RS19895 PF00361 Proton-conducting membrane transporter CJP42_RS19900 PF13247 4Fe-4S dicluster domain CJP42_RS19905 PF11046 Transcriptional repressor of hyc and hyp operons CJP42_RS19915 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CJP42_RS19920 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJP42_RS19925 PF01455 HupF/HypC family CJP42_RS19930 PF01924 Hydrogenase formation hypA family CJP42_RS19935 PF02769 AIR synthase related protein, C-terminal domain CJP42_RS19935 PF00586 AIR synthase related protein, N-terminal domain CJP42_RS19940 PF02954 Bacterial regulatory protein, Fis family CJP42_RS19940 PF01590 GAF domain CJP42_RS19940 PF00158 Sigma-54 interaction domain CJP42_RS19945 PF11756 Nitrous oxide-stimulated promoter CJP42_RS19950 PF01297 Zinc-uptake complex component A periplasmic CJP42_RS19955 PF00005 ABC transporter CJP42_RS19960 PF00950 ABC 3 transport family CJP42_RS19965 PF00950 ABC 3 transport family CJP42_RS19985 PF12833 Helix-turn-helix domain CJP42_RS20000 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) CJP42_RS20005 PF01514 Secretory protein of YscJ/FliF family CJP42_RS20015 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF CJP42_RS20020 PF09480 Type III secretion system protein PrgH-EprH (PrgH) CJP42_RS20025 PF12833 Helix-turn-helix domain CJP42_RS20030 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS20035 PF01464 Transglycosylase SLT domain CJP42_RS20040 PF09119 SicP binding CJP42_RS20040 PF03545 Yersinia virulence determinant (YopE) CJP42_RS20040 PF00102 Protein-tyrosine phosphatase CJP42_RS20055 PF00550 Phosphopantetheine attachment site CJP42_RS20060 PF09052 SipA N-terminal domain CJP42_RS20065 PF06511 Type III secretion systems tip complex components CJP42_RS20070 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) CJP42_RS20075 PF16535 Type III cell invasion protein SipB CJP42_RS20075 PF04888 Secretion system effector C (SseC) like family CJP42_RS20080 PF07720 Tetratricopeptide repeat CJP42_RS20085 PF01312 FlhB HrpN YscU SpaS Family CJP42_RS20090 PF01311 Bacterial export proteins, family 1 CJP42_RS20095 PF01313 Bacterial export proteins, family 3 CJP42_RS20100 PF00813 FliP family CJP42_RS20105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJP42_RS20110 PF02510 Surface presentation of antigens protein CJP42_RS20115 PF02090 Salmonella surface presentation of antigen gene type M protein CJP42_RS20120 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJP42_RS20120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJP42_RS20120 PF18269 T3SS EscN ATPase C-terminal domain CJP42_RS20125 PF03519 Invasion protein B family CJP42_RS20130 PF00771 FHIPEP family CJP42_RS20135 PF07201 HrpJ-like domain CJP42_RS20140 PF00263 Bacterial type II and III secretion system protein CJP42_RS20140 PF03958 Bacterial type II/III secretion system short domain CJP42_RS20145 PF12833 Helix-turn-helix domain CJP42_RS20150 PF04741 InvH outer membrane lipoprotein CJP42_RS20175 PF00149 Calcineurin-like phosphoesterase CJP42_RS20185 PF00488 MutS domain V CJP42_RS20185 PF05190 MutS family domain IV CJP42_RS20185 PF05188 MutS domain II CJP42_RS20185 PF01624 MutS domain I CJP42_RS20185 PF05192 MutS domain III CJP42_RS20195 PF07690 Major Facilitator Superfamily CJP42_RS20200 PF03466 LysR substrate binding domain CJP42_RS20200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS20205 PF02447 GntP family permease CJP42_RS20210 PF01370 NAD dependent epimerase/dehydratase family CJP42_RS20215 PF01261 Xylose isomerase-like TIM barrel CJP42_RS20220 PF00596 Class II Aldolase and Adducin N-terminal domain CJP42_RS20235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJP42_RS20235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJP42_RS20240 PF00455 DeoR C terminal sensor domain CJP42_RS20240 PF08220 DeoR-like helix-turn-helix domain CJP42_RS20245 PF01047 MarR family CJP42_RS20250 PF02441 Flavoprotein CJP42_RS20255 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CJP42_RS20270 PF01551 Peptidase family M23 CJP42_RS20270 PF01476 LysM domain CJP42_RS20280 PF01975 Survival protein SurE CJP42_RS20285 PF01142 tRNA pseudouridine synthase D (TruD) CJP42_RS20290 PF02542 YgbB family CJP42_RS20295 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJP42_RS20300 PF04977 Septum formation initiator CJP42_RS20305 PF12084 Protein of unknown function (DUF3561) CJP42_RS20315 PF00009 Elongation factor Tu GTP binding domain CJP42_RS20320 PF01507 Phosphoadenosine phosphosulfate reductase family CJP42_RS20325 PF04389 Peptidase family M28 CJP42_RS20330 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CJP42_RS20335 PF01867 CRISPR associated protein Cas1 CJP42_RS20345 PF09704 CRISPR-associated protein (Cas_Cas5) CJP42_RS20350 PF09344 CT1975-like protein CJP42_RS20370 PF11047 Salmonella outer protein D CJP42_RS20375 PF01507 Phosphoadenosine phosphosulfate reductase family CJP42_RS20385 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJP42_RS20385 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJP42_RS20390 PF00667 FAD binding domain CJP42_RS20390 PF00175 Oxidoreductase NAD-binding domain CJP42_RS20390 PF00258 Flavodoxin CJP42_RS20400 PF01242 6-pyruvoyl tetrahydropterin synthase CJP42_RS20405 PF12706 Beta-lactamase superfamily domain CJP42_RS20405 PF03099 Biotin/lipoate A/B protein ligase family CJP42_RS20415 PF04055 Radical SAM superfamily CJP42_RS20420 PF00113 Enolase, C-terminal TIM barrel domain CJP42_RS20420 PF03952 Enolase, N-terminal domain CJP42_RS20425 PF06418 CTP synthase N-terminus CJP42_RS20425 PF00117 Glutamine amidotransferase class-I CJP42_RS20430 PF03819 MazG nucleotide pyrophosphohydrolase domain CJP42_RS20440 PF13953 PapC C-terminal domain CJP42_RS20440 PF00577 Outer membrane usher protein CJP42_RS20440 PF13954 PapC N-terminal domain CJP42_RS20445 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS20445 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS20450 PF00419 Fimbrial protein CJP42_RS20460 PF00419 Fimbrial protein CJP42_RS20480 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CJP42_RS20485 PF13291 ACT domain CJP42_RS20485 PF02824 TGS domain CJP42_RS20485 PF04607 Region found in RelA / SpoT proteins CJP42_RS20490 PF01938 TRAM domain CJP42_RS20490 PF05958 tRNA (Uracil-5-)-methyltransferase CJP42_RS20495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS20495 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS20495 PF00672 HAMP domain CJP42_RS20495 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CJP42_RS20495 PF00072 Response regulator receiver domain CJP42_RS20495 PF01627 Hpt domain CJP42_RS20500 PF02595 Glycerate kinase family CJP42_RS20505 PF13378 Enolase C-terminal domain-like CJP42_RS20510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJP42_RS20510 PF13378 Enolase C-terminal domain-like CJP42_RS20515 PF07690 Major Facilitator Superfamily CJP42_RS20525 PF00258 Flavodoxin CJP42_RS20530 PF00849 RNA pseudouridylate synthase CJP42_RS20535 PF04287 tRNA pseudouridine synthase C CJP42_RS20545 PF07348 Syd protein (SUKH-2) CJP42_RS20550 PF14489 QueF-like protein CJP42_RS20550 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CJP42_RS20555 PF11892 Domain of unknown function (DUF3412) CJP42_RS20555 PF03641 Possible lysine decarboxylase CJP42_RS20555 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CJP42_RS20565 PF03315 Serine dehydratase beta chain CJP42_RS20565 PF03313 Serine dehydratase alpha chain CJP42_RS20575 PF01367 5'-3' exonuclease, C-terminal SAM fold CJP42_RS20575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJP42_RS20580 PF00465 Iron-containing alcohol dehydrogenase CJP42_RS20585 PF00596 Class II Aldolase and Adducin N-terminal domain CJP42_RS20590 PF07690 Major Facilitator Superfamily CJP42_RS20595 PF07882 L-fucose isomerase, second N-terminal domain CJP42_RS20595 PF07881 L-fucose isomerase, first N-terminal domain CJP42_RS20595 PF02952 L-fucose isomerase, C-terminal domain CJP42_RS20600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJP42_RS20600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJP42_RS20605 PF05025 RbsD / FucU transport protein family CJP42_RS20610 PF08220 DeoR-like helix-turn-helix domain CJP42_RS20610 PF00455 DeoR C terminal sensor domain CJP42_RS20615 PF01728 FtsJ-like methyltransferase CJP42_RS20615 PF18125 RlmM ferredoxin-like domain CJP42_RS20620 PF04241 Protein of unknown function (DUF423) CJP42_RS20625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS20625 PF03466 LysR substrate binding domain CJP42_RS20630 PF06004 Bacterial protein of unknown function (DUF903) CJP42_RS20635 PF00266 Aminotransferase class-V CJP42_RS20640 PF02657 Fe-S metabolism associated domain CJP42_RS20645 PF00892 EamA-like transporter family CJP42_RS20650 PF00899 ThiF family CJP42_RS20655 PF06725 3D domain CJP42_RS20655 PF03562 MltA specific insert domain CJP42_RS20670 PF11741 AMIN domain CJP42_RS20670 PF01520 N-acetylmuramoyl-L-alanine amidase CJP42_RS20675 PF00583 Acetyltransferase (GNAT) family CJP42_RS20675 PF00696 Amino acid kinase family CJP42_RS20680 PF13538 UvrD-like helicase C-terminal domain CJP42_RS20685 PF13361 UvrD-like helicase C-terminal domain CJP42_RS20685 PF00580 UvrD/REP helicase N-terminal domain CJP42_RS20685 PF12705 PD-(D/E)XK nuclease superfamily CJP42_RS20690 PF05193 Peptidase M16 inactive domain CJP42_RS20690 PF16187 Middle or third domain of peptidase_M16 CJP42_RS20690 PF00675 Insulinase (Peptidase family M16) CJP42_RS20695 PF17946 RecC C-terminal domain CJP42_RS20700 PF07963 Prokaryotic N-terminal methylation motif CJP42_RS20700 PF12528 Type II secretion prepilin peptidase dependent protein C CJP42_RS20705 PF10713 Protein of unknown function (DUF2509) CJP42_RS20710 PF07963 Prokaryotic N-terminal methylation motif CJP42_RS20715 PF07963 Prokaryotic N-terminal methylation motif CJP42_RS20720 PF01797 Transposase IS200 like CJP42_RS20730 PF00303 Thymidylate synthase CJP42_RS20735 PF01790 Prolipoprotein diacylglyceryl transferase CJP42_RS20740 PF02896 PEP-utilising enzyme, TIM barrel domain CJP42_RS20740 PF00391 PEP-utilising enzyme, mobile domain CJP42_RS20740 PF05524 PEP-utilising enzyme, N-terminal CJP42_RS20740 PF01590 GAF domain CJP42_RS20745 PF00293 NUDIX domain CJP42_RS20750 PF02976 DNA mismatch repair enzyme MutH CJP42_RS20755 PF03741 Integral membrane protein TerC family CJP42_RS20760 PF06004 Bacterial protein of unknown function (DUF903) CJP42_RS20765 PF00248 Aldo/keto reductase family CJP42_RS20770 PF07690 Major Facilitator Superfamily CJP42_RS20775 PF01553 Acyltransferase CJP42_RS20775 PF00501 AMP-binding enzyme CJP42_RS20780 PF01797 Transposase IS200 like CJP42_RS20800 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS20805 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS20810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJP42_RS20810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJP42_RS20815 PF03466 LysR substrate binding domain CJP42_RS20815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS20820 PF01177 Asp/Glu/Hydantoin racemase CJP42_RS20825 PF00083 Sugar (and other) transporter CJP42_RS20840 PF04962 KduI/IolB family CJP42_RS20850 PF00108 Thiolase, N-terminal domain CJP42_RS20850 PF02803 Thiolase, C-terminal domain CJP42_RS20855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS20855 PF03466 LysR substrate binding domain CJP42_RS20865 PF03222 Tryptophan/tyrosine permease family CJP42_RS20870 PF02583 Metal-sensitive transcriptional repressor CJP42_RS20895 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJP42_RS20895 PF02753 Pili assembly chaperone PapD, C-terminal domain CJP42_RS20900 PF00577 Outer membrane usher protein CJP42_RS20900 PF13954 PapC N-terminal domain CJP42_RS20900 PF13953 PapC C-terminal domain CJP42_RS20905 PF00419 Fimbrial protein CJP42_RS20915 PF13505 Outer membrane protein beta-barrel domain CJP42_RS20925 PF01850 PIN domain CJP42_RS20965 PF00589 Phage integrase family CJP42_RS20965 PF02899 Phage integrase, N-terminal SAM-like domain CJP42_RS20975 PF01476 LysM domain CJP42_RS20975 PF01551 Peptidase family M23 CJP42_RS20985 PF00293 NUDIX domain CJP42_RS20990 PF01336 OB-fold nucleic acid binding domain CJP42_RS20990 PF00152 tRNA synthetases class II (D, K and N) CJP42_RS21000 PF01368 DHH family CJP42_RS21000 PF17768 RecJ OB domain CJP42_RS21000 PF02272 DHHA1 domain CJP42_RS21005 PF13098 Thioredoxin-like domain CJP42_RS21005 PF10411 Disulfide bond isomerase protein N-terminus CJP42_RS21010 PF00589 Phage integrase family CJP42_RS21010 PF02899 Phage integrase, N-terminal SAM-like domain CJP42_RS21015 PF00258 Flavodoxin CJP42_RS21020 PF07254 Membrane-bound toxin component of toxin-antitoxin system CJP42_RS21025 PF03937 Flavinator of succinate dehydrogenase CJP42_RS21035 PF01571 Aminomethyltransferase folate-binding domain CJP42_RS21045 PF03006 Haemolysin-III related CJP42_RS21050 PF04266 ASCH domain CJP42_RS21055 PF00232 Glycosyl hydrolase family 1 CJP42_RS21070 PF02347 Glycine cleavage system P-protein CJP42_RS21075 PF01597 Glycine cleavage H-protein CJP42_RS21080 PF01571 Aminomethyltransferase folate-binding domain CJP42_RS21080 PF08669 Glycine cleavage T-protein C-terminal barrel domain CJP42_RS21085 PF01494 FAD binding domain CJP42_RS21090 PF01494 FAD binding domain CJP42_RS21095 PF05195 Aminopeptidase P, N-terminal domain CJP42_RS21095 PF00557 Metallopeptidase family M24 CJP42_RS21100 PF03695 Uncharacterised protein family (UPF0149) CJP42_RS21110 PF05164 Cell division protein ZapA CJP42_RS21120 PF01812 5-formyltetrahydrofolate cyclo-ligase family CJP42_RS21125 PF01842 ACT domain CJP42_RS21125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJP42_RS21125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJP42_RS21130 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CJP42_RS21135 PF03466 LysR substrate binding domain CJP42_RS21135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS21145 PF04402 Protein of unknown function (DUF541) CJP42_RS21150 PF01810 LysE type translocator CJP42_RS21155 PF05552 Conserved TM helix CJP42_RS21155 PF00924 Mechanosensitive ion channel CJP42_RS21165 PF01797 Transposase IS200 like CJP42_RS21175 PF01116 Fructose-bisphosphate aldolase class-II CJP42_RS21180 PF00162 Phosphoglycerate kinase CJP42_RS21185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJP42_RS21185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJP42_RS21210 PF00005 ABC transporter CJP42_RS21215 PF00005 ABC transporter CJP42_RS21220 PF01797 Transposase IS200 like CJP42_RS21235 PF00456 Transketolase, thiamine diphosphate binding domain CJP42_RS21235 PF02780 Transketolase, C-terminal domain CJP42_RS21235 PF02779 Transketolase, pyrimidine binding domain CJP42_RS21240 PF01435 Peptidase family M48 CJP42_RS21245 PF00491 Arginase family CJP42_RS21250 PF17944 Arginine decarboxylase C-terminal helical extension CJP42_RS21250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJP42_RS21250 PF17810 Arginine decarboxylase helical bundle domain CJP42_RS21270 PF02773 S-adenosylmethionine synthetase, C-terminal domain CJP42_RS21270 PF00438 S-adenosylmethionine synthetase, N-terminal domain CJP42_RS21270 PF02772 S-adenosylmethionine synthetase, central domain CJP42_RS21275 PF00083 Sugar (and other) transporter CJP42_RS21280 PF17283 SprT-like zinc ribbon domain CJP42_RS21280 PF10263 SprT-like family CJP42_RS21285 PF04231 Endonuclease I CJP42_RS21290 PF04452 RNA methyltransferase CJP42_RS21295 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CJP42_RS21295 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CJP42_RS21300 PF02622 Uncharacterized ACR, COG1678 CJP42_RS21305 PF03652 Holliday junction resolvase CJP42_RS21315 PF00437 Type II/IV secretion system protein CJP42_RS21320 PF01168 Alanine racemase, N-terminal domain CJP42_RS21325 PF02325 YGGT family CJP42_RS21330 PF02594 Uncharacterised ACR, YggU family COG1872 CJP42_RS21335 PF01725 Ham1 family CJP42_RS21340 PF06969 HemN C-terminal domain CJP42_RS21340 PF04055 Radical SAM superfamily CJP42_RS21345 PF06717 Protein of unknown function (DUF1202) CJP42_RS21350 PF17763 Glutaminase/Asparaginase C-terminal domain CJP42_RS21350 PF00710 Asparaginase, N-terminal CJP42_RS21360 PF01797 Transposase IS200 like CJP42_RS21365 PF11101 Protein of unknown function (DUF2884) CJP42_RS21370 PF04320 Protein with unknown function (DUF469) CJP42_RS21375 PF02390 Putative methyltransferase CJP42_RS21385 PF00730 HhH-GPD superfamily base excision DNA repair protein CJP42_RS21385 PF14815 NUDIX domain CJP42_RS21385 PF00633 Helix-hairpin-helix motif CJP42_RS21390 PF04362 Bacterial Fe(2+) trafficking CJP42_RS21395 PF01464 Transglycosylase SLT domain CJP42_RS21395 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CJP42_RS21400 PF03825 Nucleoside H+ symporter CJP42_RS21415 PF04474 Protein of unknown function (DUF554) CJP42_RS21450 PF01320 Colicin immunity protein / pyocin immunity protein CJP42_RS21460 PF01320 Colicin immunity protein / pyocin immunity protein CJP42_RS21500 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS21510 PF13520 Amino acid permease CJP42_RS21520 PF01266 FAD dependent oxidoreductase CJP42_RS21525 PF00171 Aldehyde dehydrogenase family CJP42_RS21530 PF04965 Gene 25-like lysozyme CJP42_RS21545 PF01522 Polysaccharide deacetylase CJP42_RS21555 PF07690 Major Facilitator Superfamily CJP42_RS21560 PF03786 D-mannonate dehydratase (UxuA) CJP42_RS21565 PF01232 Mannitol dehydrogenase Rossmann domain CJP42_RS21565 PF08125 Mannitol dehydrogenase C-terminal domain CJP42_RS21570 PF02614 Glucuronate isomerase CJP42_RS21580 PF03738 Glutathionylspermidine synthase preATP-grasp CJP42_RS21580 PF05257 CHAP domain CJP42_RS21585 PF02798 Glutathione S-transferase, N-terminal domain CJP42_RS21595 PF01497 Periplasmic binding protein CJP42_RS21600 PF01455 HupF/HypC family CJP42_RS21605 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CJP42_RS21610 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CJP42_RS21615 PF01750 Hydrogenase maturation protease CJP42_RS21620 PF00374 Nickel-dependent hydrogenase CJP42_RS21625 PF03916 Polysulphide reductase, NrfD CJP42_RS21630 PF13247 4Fe-4S dicluster domain CJP42_RS21635 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJP42_RS21635 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CJP42_RS21640 PF11115 Protein of unknown function (DUF2623) CJP42_RS21650 PF03350 Uncharacterized protein family, UPF0114 CJP42_RS21675 PF02472 Biopolymer transport protein ExbD/TolR CJP42_RS21680 PF01618 MotA/TolQ/ExbB proton channel family CJP42_RS21690 PF01053 Cys/Met metabolism PLP-dependent enzyme CJP42_RS21695 PF09335 SNARE associated Golgi protein CJP42_RS21700 PF06719 AraC-type transcriptional regulator N-terminus CJP42_RS21700 PF12833 Helix-turn-helix domain CJP42_RS21705 PF00465 Iron-containing alcohol dehydrogenase CJP42_RS21715 PF00939 Sodium:sulfate symporter transmembrane region CJP42_RS21725 PF04055 Radical SAM superfamily CJP42_RS21725 PF11842 Domain of unknown function (DUF3362) CJP42_RS21725 PF08497 Radical SAM N-terminal CJP42_RS21755 PF00394 Multicopper oxidase CJP42_RS21755 PF07731 Multicopper oxidase CJP42_RS21755 PF07732 Multicopper oxidase CJP42_RS21760 PF01553 Acyltransferase CJP42_RS21765 PF00521 DNA gyrase/topoisomerase IV, subunit A CJP42_RS21765 PF03989 DNA gyrase C-terminal domain, beta-propeller CJP42_RS21770 PF06445 GyrI-like small molecule binding domain CJP42_RS21775 PF04076 Bacterial OB fold (BOF) protein CJP42_RS21780 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS21780 PF00072 Response regulator receiver domain CJP42_RS21785 PF08521 Two-component sensor kinase N-terminal CJP42_RS21785 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS21785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS21795 PF03992 Antibiotic biosynthesis monooxygenase CJP42_RS21800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS21800 PF00986 DNA gyrase B subunit, carboxyl terminus CJP42_RS21800 PF01751 Toprim domain CJP42_RS21800 PF00204 DNA gyrase B CJP42_RS21805 PF05728 Uncharacterised protein family (UPF0227) CJP42_RS21810 PF00149 Calcineurin-like phosphoesterase CJP42_RS21815 PF06853 Protein of unknown function (DUF1249) CJP42_RS21820 PF00293 NUDIX domain CJP42_RS21825 PF02321 Outer membrane efflux protein CJP42_RS21835 PF06693 Protein of unknown function (DUF1190) CJP42_RS21840 PF03738 Glutathionylspermidine synthase preATP-grasp CJP42_RS21845 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJP42_RS21850 PF02535 ZIP Zinc transporter CJP42_RS21860 PF17425 Arylsulfotransferase Ig-like domain CJP42_RS21860 PF05935 Arylsulfotransferase (ASST) CJP42_RS21865 PF01323 DSBA-like thioredoxin domain CJP42_RS21870 PF02600 Disulfide bond formation protein DsbB CJP42_RS21875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJP42_RS21880 PF04380 Membrane fusogenic activity CJP42_RS21885 PF08971 Glycogen synthesis protein CJP42_RS21890 PF07290 Protein of unknown function (DUF1449) CJP42_RS21895 PF15975 Flotillin CJP42_RS21895 PF01145 SPFH domain / Band 7 family CJP42_RS21905 PF00294 pfkB family carbohydrate kinase CJP42_RS21905 PF01467 Cytidylyltransferase-like CJP42_RS21910 PF08335 GlnD PII-uridylyltransferase CJP42_RS21910 PF03710 Glutamate-ammonia ligase adenylyltransferase CJP42_RS21915 PF01928 CYTH domain CJP42_RS21925 PF08239 Bacterial SH3 domain CJP42_RS21930 PF01743 Poly A polymerase head domain CJP42_RS21930 PF01966 HD domain CJP42_RS21930 PF12627 Probable RNA and SrmB- binding site of polymerase A CJP42_RS21935 PF02673 Bacitracin resistance protein BacA CJP42_RS21940 PF02152 Dihydroneopterin aldolase CJP42_RS21945 PF02660 Glycerol-3-phosphate acyltransferase CJP42_RS21950 PF05681 Fumarate hydratase (Fumerase) CJP42_RS21955 PF00814 Glycoprotease family CJP42_RS21965 PF01165 Ribosomal protein S21 CJP42_RS21970 PF10410 DnaB-helicase binding domain of primase CJP42_RS21970 PF08275 DNA primase catalytic core, N-terminal domain CJP42_RS21970 PF01807 CHC2 zinc finger CJP42_RS21970 PF08278 DNA primase DnaG DnaB-binding CJP42_RS21975 PF04539 Sigma-70 region 3 CJP42_RS21975 PF00140 Sigma-70 factor, region 1.2 CJP42_RS21975 PF03979 Sigma-70 factor, region 1.1 CJP42_RS21975 PF04546 Sigma-70, non-essential region CJP42_RS21975 PF04542 Sigma-70 region 2 CJP42_RS21975 PF04545 Sigma-70, region 4 CJP42_RS21980 PF03167 Uracil DNA glycosylase superfamily CJP42_RS21990 PF04954 Siderophore-interacting protein CJP42_RS21990 PF08021 Siderophore-interacting FAD-binding domain CJP42_RS21995 PF03551 Transcriptional regulator PadR-like family CJP42_RS22000 PF02203 Tar ligand binding domain homologue CJP42_RS22000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJP42_RS22000 PF00672 HAMP domain CJP42_RS22005 PF08447 PAS fold CJP42_RS22005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJP42_RS22015 PF00202 Aminotransferase class-III CJP42_RS22025 PF05175 Methyltransferase small domain CJP42_RS22030 PF01863 Protein of unknown function DUF45 CJP42_RS22035 PF02698 DUF218 domain CJP42_RS22040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJP42_RS22045 PF03741 Integral membrane protein TerC family CJP42_RS22050 PF00375 Sodium:dicarboxylate symporter family CJP42_RS22055 PF09335 SNARE associated Golgi protein CJP42_RS22060 PF13721 SecD export protein N-terminal TM region CJP42_RS22065 PF06476 Protein of unknown function (DUF1090) CJP42_RS22070 PF05957 Bacterial protein of unknown function (DUF883) CJP42_RS22075 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CJP42_RS22080 PF13997 YqjK-like protein CJP42_RS22085 PF07681 DoxX CJP42_RS22090 PF13409 Glutathione S-transferase, N-terminal domain CJP42_RS22095 PF05656 Protein of unknown function (DUF805) CJP42_RS22100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS22100 PF03466 LysR substrate binding domain CJP42_RS22105 PF17954 Quercetinase C-terminal cupin domain CJP42_RS22105 PF02678 Pirin CJP42_RS22115 PF03313 Serine dehydratase alpha chain CJP42_RS22125 PF03313 Serine dehydratase alpha chain CJP42_RS22125 PF03315 Serine dehydratase beta chain CJP42_RS22130 PF02901 Pyruvate formate lyase-like CJP42_RS22130 PF01228 Glycine radical CJP42_RS22135 PF00871 Acetokinase family CJP42_RS22145 PF00291 Pyridoxal-phosphate dependent enzyme CJP42_RS22150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS22150 PF03466 LysR substrate binding domain CJP42_RS22175 PF02595 Glycerate kinase family CJP42_RS22180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJP42_RS22180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJP42_RS22185 PF03328 HpcH/HpaI aldolase/citrate lyase family CJP42_RS22190 PF08666 SAF domain CJP42_RS22190 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CJP42_RS22195 PF00294 pfkB family carbohydrate kinase CJP42_RS22200 PF00455 DeoR C terminal sensor domain CJP42_RS22200 PF08220 DeoR-like helix-turn-helix domain CJP42_RS22205 PF01116 Fructose-bisphosphate aldolase class-II CJP42_RS22210 PF00294 pfkB family carbohydrate kinase CJP42_RS22215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJP42_RS22215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJP42_RS22220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJP42_RS22220 PF00381 PTS HPr component phosphorylation site CJP42_RS22230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJP42_RS22235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJP42_RS22240 PF03611 PTS system sugar-specific permease component CJP42_RS22245 PF08240 Alcohol dehydrogenase GroES-like domain CJP42_RS22245 PF00107 Zinc-binding dehydrogenase CJP42_RS22250 PF08220 DeoR-like helix-turn-helix domain CJP42_RS22255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJP42_RS22265 PF02021 Uncharacterised protein family UPF0102 CJP42_RS22270 PF13580 SIS domain CJP42_RS22275 PF04972 BON domain CJP42_RS22280 PF13460 NAD(P)H-binding CJP42_RS22285 PF01965 DJ-1/PfpI family CJP42_RS22295 PF01541 GIY-YIG catalytic domain CJP42_RS22300 PF13508 Acetyltransferase (GNAT) domain CJP42_RS22305 PF02036 SCP-2 sterol transfer family CJP42_RS22310 PF01136 Peptidase family U32 CJP42_RS22315 PF01136 Peptidase family U32 CJP42_RS22320 PF00296 Luciferase-like monooxygenase CJP42_RS22325 PF03222 Tryptophan/tyrosine permease family CJP42_RS22330 PF03880 DbpA RNA binding domain CJP42_RS22330 PF12343 Cold shock protein DEAD box A CJP42_RS22330 PF00270 DEAD/DEAH box helicase CJP42_RS22330 PF00271 Helicase conserved C-terminal domain CJP42_RS22335 PF07719 Tetratricopeptide repeat CJP42_RS22335 PF13181 Tetratricopeptide repeat CJP42_RS22340 PF00575 S1 RNA binding domain CJP42_RS22340 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CJP42_RS22340 PF03725 3' exoribonuclease family, domain 2 CJP42_RS22340 PF00013 KH domain CJP42_RS22340 PF01138 3' exoribonuclease family, domain 1 CJP42_RS22345 PF00312 Ribosomal protein S15 CJP42_RS22350 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJP42_RS22350 PF16198 tRNA pseudouridylate synthase B C-terminal domain CJP42_RS22350 PF09157 Pseudouridine synthase II TruB, C-terminal CJP42_RS22355 PF02033 Ribosome-binding factor A CJP42_RS22360 PF00009 Elongation factor Tu GTP binding domain CJP42_RS22360 PF08364 Bacterial translation initiation factor IF-2 associated region CJP42_RS22360 PF04760 Translation initiation factor IF-2, N-terminal region CJP42_RS22360 PF11987 Translation-initiation factor 2 CJP42_RS22365 PF13184 NusA-like KH domain CJP42_RS22365 PF08529 NusA N-terminal domain CJP42_RS22370 PF02576 RimP N-terminal domain CJP42_RS22370 PF17384 RimP C-terminal SH3 domain CJP42_RS22380 PF00764 Arginosuccinate synthase CJP42_RS22390 PF03840 Preprotein translocase SecG subunit CJP42_RS22395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJP42_RS22395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJP42_RS22395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJP42_RS22395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJP42_RS22400 PF00809 Pterin binding enzyme CJP42_RS22405 PF06480 FtsH Extracellular CJP42_RS22405 PF01434 Peptidase family M41 CJP42_RS22405 PF00004 ATPase family associated with various cellular activities (AAA) CJP42_RS22405 PF17862 AAA+ lid domain CJP42_RS22415 PF01728 FtsJ-like methyltransferase CJP42_RS22420 PF01985 CRS1 / YhbY (CRM) domain CJP42_RS22425 PF01272 Transcription elongation factor, GreA/GreB, C-term CJP42_RS22425 PF03449 Transcription elongation factor, N-terminal CJP42_RS22430 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CJP42_RS22435 PF01018 GTP1/OBG CJP42_RS22435 PF01926 50S ribosome-binding GTPase CJP42_RS22440 PF00892 EamA-like transporter family CJP42_RS22445 PF01016 Ribosomal L27 protein CJP42_RS22450 PF00829 Ribosomal prokaryotic L21 protein CJP42_RS22455 PF00348 Polyprenyl synthetase CJP42_RS22460 PF13693 Winged helix-turn-helix DNA-binding CJP42_RS22465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJP42_RS22470 PF01722 BolA-like protein CJP42_RS22475 PF13466 STAS domain CJP42_RS22480 PF05494 MlaC protein CJP42_RS22485 PF02470 MlaD protein CJP42_RS22490 PF02405 Permease MlaE CJP42_RS22495 PF00005 ABC transporter CJP42_RS22500 PF01699 Sodium/calcium exchanger protein CJP42_RS22505 PF00571 CBS domain CJP42_RS22505 PF01380 SIS domain CJP42_RS22515 PF06835 Lipopolysaccharide-assembly, LptC-related CJP42_RS22520 PF03968 OstA-like protein CJP42_RS22525 PF00005 ABC transporter CJP42_RS22525 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJP42_RS22530 PF04963 Sigma-54 factor, core binding domain CJP42_RS22530 PF00309 Sigma-54 factor, Activator interacting domain (AID) CJP42_RS22530 PF04552 Sigma-54, DNA binding domain CJP42_RS22535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJP42_RS22540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJP42_RS22545 PF03668 P-loop ATPase protein family CJP42_RS22550 PF00381 PTS HPr component phosphorylation site CJP42_RS22560 PF10707 PhoP regulatory network protein YrbL CJP42_RS22565 PF00912 Transglycosylase CJP42_RS22575 PF00072 Response regulator receiver domain CJP42_RS22575 PF00989 PAS fold CJP42_RS22575 PF01627 Hpt domain CJP42_RS22575 PF18415 Histidine kinase receptor ArcB trans-membrane domain CJP42_RS22575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS22575 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS22580 PF16199 Radical_SAM C-terminal domain CJP42_RS22580 PF04055 Radical SAM superfamily CJP42_RS22590 PF04898 Glutamate synthase central domain CJP42_RS22590 PF01493 GXGXG motif CJP42_RS22590 PF01645 Conserved region in glutamate synthase CJP42_RS22590 PF00310 Glutamine amidotransferases class-II CJP42_RS22595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJP42_RS22595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS22600 PF17761 DUF1016 N-terminal domain CJP42_RS22600 PF06250 YhcG PDDEXK nuclease domain CJP42_RS22605 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CJP42_RS22610 PF07969 Amidohydrolase family CJP42_RS22615 PF04074 YhcH/YjgK/YiaL CJP42_RS22620 PF00480 ROK family CJP42_RS22630 PF07690 Major Facilitator Superfamily CJP42_RS22635 PF00701 Dihydrodipicolinate synthetase family CJP42_RS22640 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS22640 PF07729 FCD domain CJP42_RS22645 PF04386 Stringent starvation protein B CJP42_RS22650 PF00043 Glutathione S-transferase, C-terminal domain CJP42_RS22650 PF02798 Glutathione S-transferase, N-terminal domain CJP42_RS22655 PF00380 Ribosomal protein S9/S16 CJP42_RS22660 PF00572 Ribosomal protein L13 CJP42_RS22665 PF03969 AFG1-like ATPase CJP42_RS22670 PF06295 Protein of unknown function (DUF1043) CJP42_RS22675 PF13180 PDZ domain CJP42_RS22675 PF00595 PDZ domain CJP42_RS22680 PF13180 PDZ domain CJP42_RS22685 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CJP42_RS22690 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CJP42_RS22695 PF00364 Biotin-requiring enzyme CJP42_RS22695 PF00682 HMGL-like CJP42_RS22695 PF02436 Conserved carboxylase domain CJP42_RS22700 PF04277 Oxaloacetate decarboxylase, gamma chain CJP42_RS22705 PF05683 Fumarase C-terminus CJP42_RS22710 PF05681 Fumarate hydratase (Fumerase) CJP42_RS22715 PF00939 Sodium:sulfate symporter transmembrane region CJP42_RS22725 PF07702 UTRA domain CJP42_RS22725 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS22730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJP42_RS22730 PF00056 lactate/malate dehydrogenase, NAD binding domain CJP42_RS22735 PF01316 Arginine repressor, DNA binding domain CJP42_RS22735 PF02863 Arginine repressor, C-terminal domain CJP42_RS22740 PF07338 Protein of unknown function (DUF1471) CJP42_RS22745 PF07338 Protein of unknown function (DUF1471) CJP42_RS22750 PF01337 Barstar (barnase inhibitor) CJP42_RS22755 PF04632 Fusaric acid resistance protein family CJP42_RS22760 PF13533 Biotin-lipoyl like CJP42_RS22765 PF07869 Protein of unknown function (DUF1656) CJP42_RS22770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS22770 PF03466 LysR substrate binding domain CJP42_RS22775 PF01523 Putative modulator of DNA gyrase CJP42_RS22780 PF13502 AsmA-like C-terminal region CJP42_RS22780 PF13116 Protein of unknown function CJP42_RS22785 PF00575 S1 RNA binding domain CJP42_RS22785 PF10150 Ribonuclease E/G family CJP42_RS22790 PF02545 Maf-like protein CJP42_RS22795 PF04093 rod shape-determining protein MreD CJP42_RS22800 PF04085 rod shape-determining protein MreC CJP42_RS22820 PF17157 Gammaproteobacterial periplasmic sensor domain CJP42_RS22820 PF00563 EAL domain CJP42_RS22820 PF00990 Diguanylate cyclase, GGDEF domain CJP42_RS22825 PF00107 Zinc-binding dehydrogenase CJP42_RS22825 PF08240 Alcohol dehydrogenase GroES-like domain CJP42_RS22830 PF00174 Oxidoreductase molybdopterin binding domain CJP42_RS22835 PF01794 Ferric reductase like transmembrane component CJP42_RS22840 PF00364 Biotin-requiring enzyme CJP42_RS22845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJP42_RS22845 PF00289 Biotin carboxylase, N-terminal domain CJP42_RS22845 PF02785 Biotin carboxylase C-terminal domain CJP42_RS22850 PF06196 Protein of unknown function (DUF997) CJP42_RS22855 PF00474 Sodium:solute symporter family CJP42_RS22865 PF01207 Dihydrouridine synthase (Dus) CJP42_RS22870 PF02954 Bacterial regulatory protein, Fis family CJP42_RS22875 PF01555 DNA methylase CJP42_RS22880 PF10831 Protein of unknown function (DUF2556) CJP42_RS22935 PF00132 Bacterial transferase hexapeptide (six repeats) CJP42_RS22940 PF07369 Protein of unknown function (DUF1488) CJP42_RS22945 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJP42_RS22945 PF01488 Shikimate / quinate 5-dehydrogenase CJP42_RS22945 PF08501 Shikimate dehydrogenase substrate binding domain CJP42_RS22950 PF01300 Telomere recombination CJP42_RS22955 PF01396 Topoisomerase DNA binding C4 zinc finger CJP42_RS22960 PF04361 Protein of unknown function (DUF494) CJP42_RS22965 PF17782 DprA winged helix domain CJP42_RS22965 PF02481 DNA recombination-mediator protein A CJP42_RS22970 PF01327 Polypeptide deformylase CJP42_RS22975 PF02911 Formyl transferase, C-terminal domain CJP42_RS22975 PF00551 Formyl transferase CJP42_RS22980 PF01029 NusB family CJP42_RS22980 PF01189 16S rRNA methyltransferase RsmB/F CJP42_RS22985 PF02080 TrkA-C domain CJP42_RS22985 PF02254 TrkA-N domain CJP42_RS22990 PF01741 Large-conductance mechanosensitive channel, MscL CJP42_RS22995 PF03889 Alternative ribosome-rescue factor A CJP42_RS23000 PF13411 MerR HTH family regulatory protein CJP42_RS23005 PF09350 Domain of unknown function (DUF1992) CJP42_RS23010 PF01196 Ribosomal protein L17 CJP42_RS23015 PF01000 RNA polymerase Rpb3/RpoA insert domain CJP42_RS23015 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CJP42_RS23015 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CJP42_RS23020 PF01479 S4 domain CJP42_RS23020 PF00163 Ribosomal protein S4/S9 N-terminal domain CJP42_RS23025 PF00411 Ribosomal protein S11 CJP42_RS23030 PF00416 Ribosomal protein S13/S18 CJP42_RS23035 PF00444 Ribosomal protein L36 CJP42_RS23040 PF00344 SecY translocase CJP42_RS23045 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CJP42_RS23050 PF00327 Ribosomal protein L30p/L7e CJP42_RS23055 PF03719 Ribosomal protein S5, C-terminal domain CJP42_RS23055 PF00333 Ribosomal protein S5, N-terminal domain CJP42_RS23060 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CJP42_RS23065 PF00347 Ribosomal protein L6 CJP42_RS23070 PF00410 Ribosomal protein S8 CJP42_RS23075 PF00253 Ribosomal protein S14p/S29e CJP42_RS23080 PF00673 ribosomal L5P family C-terminus CJP42_RS23080 PF00281 Ribosomal protein L5 CJP42_RS23085 PF00467 KOW motif CJP42_RS23085 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CJP42_RS23090 PF00238 Ribosomal protein L14p/L23e CJP42_RS23095 PF00366 Ribosomal protein S17 CJP42_RS23100 PF00831 Ribosomal L29 protein CJP42_RS23105 PF00252 Ribosomal protein L16p/L10e CJP42_RS23110 PF07650 KH domain CJP42_RS23110 PF00189 Ribosomal protein S3, C-terminal domain CJP42_RS23115 PF00237 Ribosomal protein L22p/L17e CJP42_RS23120 PF00203 Ribosomal protein S19 CJP42_RS23125 PF03947 Ribosomal Proteins L2, C-terminal domain CJP42_RS23125 PF00181 Ribosomal Proteins L2, RNA binding domain CJP42_RS23130 PF00276 Ribosomal protein L23 CJP42_RS23135 PF00573 Ribosomal protein L4/L1 family CJP42_RS23140 PF00297 Ribosomal protein L3 CJP42_RS23145 PF00338 Ribosomal protein S10p/S20e CJP42_RS23155 PF01478 Type IV leader peptidase family CJP42_RS23160 PF00210 Ferritin-like domain CJP42_RS23165 PF04324 BFD-like [2Fe-2S] binding domain CJP42_RS23180 PF00009 Elongation factor Tu GTP binding domain CJP42_RS23180 PF03143 Elongation factor Tu C-terminal domain CJP42_RS23180 PF03144 Elongation factor Tu domain 2 CJP42_RS23185 PF03764 Elongation factor G, domain IV CJP42_RS23185 PF03144 Elongation factor Tu domain 2 CJP42_RS23185 PF00679 Elongation factor G C-terminus CJP42_RS23185 PF00009 Elongation factor Tu GTP binding domain CJP42_RS23185 PF14492 Elongation Factor G, domain II CJP42_RS23190 PF00177 Ribosomal protein S7p/S5e CJP42_RS23195 PF00164 Ribosomal protein S12/S23 CJP42_RS23200 PF04077 DsrH like protein CJP42_RS23205 PF02635 DsrE/DsrF-like family CJP42_RS23210 PF02635 DsrE/DsrF-like family CJP42_RS23215 PF13309 HTH domain CJP42_RS23215 PF08348 YheO-like PAS domain CJP42_RS23220 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CJP42_RS23220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJP42_RS23225 PF04102 SlyX CJP42_RS23235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJP42_RS23240 PF09526 Probable metal-binding protein (DUF2387) CJP42_RS23245 PF02254 TrkA-N domain CJP42_RS23245 PF00999 Sodium/hydrogen exchanger family CJP42_RS23250 PF02525 Flavodoxin-like fold CJP42_RS23255 PF12848 ABC transporter CJP42_RS23255 PF00005 ABC transporter CJP42_RS23260 PF03466 LysR substrate binding domain CJP42_RS23260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS23265 PF08803 Putative mono-oxygenase ydhR CJP42_RS23280 PF06794 Uncharacterised protein family (UPF0270) CJP42_RS23285 PF00485 Phosphoribulokinase / Uridine kinase family CJP42_RS23290 PF02566 OsmC-like protein CJP42_RS23295 PF00027 Cyclic nucleotide-binding domain CJP42_RS23295 PF13545 Crp-like helix-turn-helix domain CJP42_RS23305 PF00202 Aminotransferase class-III CJP42_RS23310 PF00117 Glutamine amidotransferase class-I CJP42_RS23315 PF02661 Fic/DOC family CJP42_RS23320 PF10832 Protein of unknown function (DUF2559) CJP42_RS23325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJP42_RS23330 PF07690 Major Facilitator Superfamily CJP42_RS23335 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS23335 PF04324 BFD-like [2Fe-2S] binding domain CJP42_RS23335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJP42_RS23335 PF18267 Rubredoxin NAD+ reductase C-terminal domain CJP42_RS23335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJP42_RS23340 PF13806 Rieske-like [2Fe-2S] domain CJP42_RS23345 PF01226 Formate/nitrite transporter CJP42_RS23350 PF10414 Sirohaem synthase dimerisation region CJP42_RS23350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJP42_RS23350 PF14824 Sirohaem biosynthesis protein central CJP42_RS23370 PF13978 Protein of unknown function (DUF4223) CJP42_RS23375 PF00579 tRNA synthetases class I (W and Y) CJP42_RS23380 PF13419 Haloacid dehalogenase-like hydrolase CJP42_RS23385 PF00834 Ribulose-phosphate 3 epimerase family CJP42_RS23390 PF02086 D12 class N6 adenine-specific DNA methyltransferase CJP42_RS23395 PF05036 Sporulation related domain CJP42_RS23400 PF01761 3-dehydroquinate synthase CJP42_RS23405 PF01202 Shikimate kinase CJP42_RS23415 PF00263 Bacterial type II and III secretion system protein CJP42_RS23415 PF03958 Bacterial type II/III secretion system short domain CJP42_RS23420 PF10748 DNA utilization proteins HofP CJP42_RS23430 PF05137 Fimbrial assembly protein (PilN) CJP42_RS23440 PF00912 Transglycosylase CJP42_RS23440 PF17092 Penicillin-binding protein OB-like domain CJP42_RS23440 PF00905 Penicillin binding protein transpeptidase domain CJP42_RS23445 PF00293 NUDIX domain CJP42_RS23450 PF07095 Intracellular growth attenuator protein IgaA CJP42_RS23455 PF13419 Haloacid dehalogenase-like hydrolase CJP42_RS23460 PF01479 S4 domain CJP42_RS23465 PF01430 Hsp33 protein CJP42_RS23470 PF13687 Domain of unknown function (DUF4153) CJP42_RS23475 PF01293 Phosphoenolpyruvate carboxykinase CJP42_RS23480 PF00672 HAMP domain CJP42_RS23480 PF00512 His Kinase A (phospho-acceptor) domain CJP42_RS23480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS23485 PF00486 Transcriptional regulatory protein, C terminal CJP42_RS23485 PF00072 Response regulator receiver domain CJP42_RS23490 PF01272 Transcription elongation factor, GreA/GreB, C-term CJP42_RS23490 PF03449 Transcription elongation factor, N-terminal CJP42_RS23495 PF16921 Tex protein YqgF-like domain CJP42_RS23495 PF09371 Tex-like protein N-terminal domain CJP42_RS23495 PF00575 S1 RNA binding domain CJP42_RS23495 PF17674 HHH domain CJP42_RS23505 PF04023 FeoA domain CJP42_RS23510 PF07670 Nucleoside recognition CJP42_RS23510 PF02421 Ferrous iron transport protein B CJP42_RS23510 PF07664 Ferrous iron transport protein B C terminus CJP42_RS23510 PF17910 FeoB cytosolic helical domain CJP42_RS23515 PF09012 FeoC like transcriptional regulator CJP42_RS23520 PF04754 Putative transposase, YhgA-like CJP42_RS23525 PF00561 alpha/beta hydrolase fold CJP42_RS23530 PF00156 Phosphoribosyl transferase domain CJP42_RS23535 PF01521 Iron-sulphur cluster biosynthesis CJP42_RS23535 PF01106 NifU-like domain CJP42_RS23540 PF02447 GntP family permease CJP42_RS23545 PF02446 4-alpha-glucanotransferase CJP42_RS23550 PF00343 Carbohydrate phosphorylase CJP42_RS23555 PF17874 MalT-like TPR region CJP42_RS23555 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS23560 PF08220 DeoR-like helix-turn-helix domain CJP42_RS23560 PF00455 DeoR C terminal sensor domain CJP42_RS23565 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CJP42_RS23565 PF01694 Rhomboid family CJP42_RS23570 PF00581 Rhodanese-like domain CJP42_RS23575 PF01266 FAD dependent oxidoreductase CJP42_RS23575 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CJP42_RS23580 PF00343 Carbohydrate phosphorylase CJP42_RS23585 PF08323 Starch synthase catalytic domain CJP42_RS23585 PF00534 Glycosyl transferases group 1 CJP42_RS23590 PF00483 Nucleotidyl transferase CJP42_RS23595 PF18390 Glycogen debranching enzyme C-terminal domain CJP42_RS23595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJP42_RS23595 PF00128 Alpha amylase, catalytic domain CJP42_RS23600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJP42_RS23600 PF00128 Alpha amylase, catalytic domain CJP42_RS23600 PF02806 Alpha amylase, C-terminal all-beta domain CJP42_RS23605 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJP42_RS23605 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJP42_RS23615 PF02447 GntP family permease CJP42_RS23620 PF01202 Shikimate kinase CJP42_RS23625 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJP42_RS23625 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS23630 PF17954 Quercetinase C-terminal cupin domain CJP42_RS23630 PF02678 Pirin CJP42_RS23635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJP42_RS23635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJP42_RS23640 PF00583 Acetyltransferase (GNAT) family CJP42_RS23645 PF00294 pfkB family carbohydrate kinase CJP42_RS23660 PF02126 Phosphotriesterase family CJP42_RS23670 PF10956 Protein of unknown function (DUF2756) CJP42_RS23675 PF03009 Glycerophosphoryl diester phosphodiesterase family CJP42_RS23680 PF17912 MalK OB fold domain CJP42_RS23680 PF00005 ABC transporter CJP42_RS23685 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS23690 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS23695 PF13416 Bacterial extracellular solute-binding protein CJP42_RS23705 PF00005 ABC transporter CJP42_RS23710 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJP42_RS23710 PF00005 ABC transporter CJP42_RS23715 PF02653 Branched-chain amino acid transport system / permease component CJP42_RS23715 PF11862 Domain of unknown function (DUF3382) CJP42_RS23720 PF02653 Branched-chain amino acid transport system / permease component CJP42_RS23725 PF13458 Periplasmic binding protein CJP42_RS23730 PF12568 Acetyltransferase (GNAT) domain, PanZ CJP42_RS23745 PF04545 Sigma-70, region 4 CJP42_RS23745 PF04542 Sigma-70 region 2 CJP42_RS23750 PF02687 FtsX-like permease family CJP42_RS23750 PF18075 FtsX extracellular domain CJP42_RS23755 PF00005 ABC transporter CJP42_RS23760 PF00448 SRP54-type protein, GTPase domain CJP42_RS23760 PF02881 SRP54-type protein, helical bundle domain CJP42_RS23770 PF06611 Protein of unknown function (DUF1145) CJP42_RS23775 PF10694 Protein of unknown function (DUF2500) CJP42_RS23780 PF07947 YhhN family CJP42_RS23785 PF00403 Heavy-metal-associated domain CJP42_RS23790 PF00672 HAMP domain CJP42_RS23790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJP42_RS23790 PF02203 Tar ligand binding domain homologue CJP42_RS23795 PF01206 Sulfurtransferase TusA CJP42_RS23800 PF02592 Putative vitamin uptake transporter CJP42_RS23805 PF08786 DcrB CJP42_RS23810 PF07690 Major Facilitator Superfamily CJP42_RS23815 PF01594 AI-2E family transporter CJP42_RS23820 PF01648 4'-phosphopantetheinyl transferase superfamily CJP42_RS23825 PF01402 Ribbon-helix-helix protein, copG family CJP42_RS23825 PF08753 NikR C terminal nickel binding domain CJP42_RS23835 PF00005 ABC transporter CJP42_RS23840 PF13533 Biotin-lipoyl like CJP42_RS23845 PF07690 Major Facilitator Superfamily CJP42_RS23855 PF01042 Endoribonuclease L-PSP CJP42_RS23865 PF07690 Major Facilitator Superfamily CJP42_RS23875 PF01384 Phosphate transporter family CJP42_RS23880 PF10625 Universal stress protein B (UspB) CJP42_RS23885 PF00582 Universal stress protein family CJP42_RS23890 PF00854 POT family CJP42_RS23895 PF04445 Putative SAM-dependent methyltransferase CJP42_RS23900 PF01432 Peptidase family M3 CJP42_RS23915 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CJP42_RS23920 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJP42_RS23920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJP42_RS23930 PF01380 SIS domain CJP42_RS23935 PF07702 UTRA domain CJP42_RS23935 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS23940 PF01204 Trehalase CJP42_RS23955 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS23960 PF03466 LysR substrate binding domain CJP42_RS23960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS23965 PF03631 Virulence factor BrkB CJP42_RS23970 PF00083 Sugar (and other) transporter CJP42_RS23970 PF07690 Major Facilitator Superfamily CJP42_RS23975 PF05170 AsmA family CJP42_RS23980 PF00563 EAL domain CJP42_RS23985 PF00294 pfkB family carbohydrate kinase CJP42_RS23990 PF00675 Insulinase (Peptidase family M16) CJP42_RS23990 PF05193 Peptidase M16 inactive domain CJP42_RS23995 PF00375 Sodium:dicarboxylate symporter family CJP42_RS24000 PF00990 Diguanylate cyclase, GGDEF domain CJP42_RS24000 PF00563 EAL domain CJP42_RS24000 PF00672 HAMP domain CJP42_RS24000 PF17154 Gammaproteobacterial periplasmic sensor domain CJP42_RS24015 PF01270 Glycosyl hydrolases family 8 CJP42_RS24020 PF03170 Bacterial cellulose synthase subunit CJP42_RS24025 PF07238 PilZ domain CJP42_RS24025 PF00535 Glycosyl transferase family 2 CJP42_RS24025 PF03552 Cellulose synthase CJP42_RS24030 PF06564 Cellulose biosynthesis protein BcsQ CJP42_RS24035 PF10945 Cellulose biosynthesis protein BcsR CJP42_RS24040 PF10995 Cellulose biosynthesis GIL CJP42_RS24045 PF11120 Cellulose biosynthesis protein BcsF CJP42_RS24050 PF11658 Cellulose biosynthesis protein BcsG CJP42_RS24055 PF13940 Toxin Ldr, type I toxin-antitoxin system CJP42_RS24065 PF03222 Tryptophan/tyrosine permease family CJP42_RS24075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJP42_RS24075 PF00005 ABC transporter CJP42_RS24080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJP42_RS24080 PF00005 ABC transporter CJP42_RS24085 PF12911 N-terminal TM domain of oligopeptide transport permease C CJP42_RS24085 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS24090 PF00528 Binding-protein-dependent transport system inner membrane component CJP42_RS24095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJP42_RS24110 PF00356 Bacterial regulatory proteins, lacI family CJP42_RS24125 PF08019 Phosphoethanolamine transferase EptA/EptB CJP42_RS24125 PF00884 Sulfatase CJP42_RS24130 PF03797 Autotransporter beta-domain CJP42_RS24135 PF03352 Methyladenine glycosylase CJP42_RS24140 PF00583 Acetyltransferase (GNAT) family CJP42_RS24145 PF00384 Molybdopterin oxidoreductase CJP42_RS24145 PF01568 Molydopterin dinucleotide binding domain CJP42_RS24145 PF18364 Molybdopterin oxidoreductase N-terminal domain CJP42_RS24150 PF00691 OmpA family CJP42_RS24150 PF13488 Glycine zipper CJP42_RS24155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJP42_RS24155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJP42_RS24160 PF11254 Protein of unknown function (DUF3053) CJP42_RS24165 PF01381 Helix-turn-helix CJP42_RS24170 PF00313 'Cold-shock' DNA-binding domain CJP42_RS24195 PF13333 Integrase core domain CJP42_RS24195 PF13276 HTH-like domain CJP42_RS24195 PF00665 Integrase core domain CJP42_RS24200 PF05746 DALR anticodon binding domain CJP42_RS24200 PF02092 Glycyl-tRNA synthetase beta subunit CJP42_RS24205 PF02091 Glycyl-tRNA synthetase alpha subunit CJP42_RS24210 PF13983 YsaB-like lipoprotein CJP42_RS24225 PF05360 yiaA/B two helix domain CJP42_RS24230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJP42_RS24230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJP42_RS24245 PF12833 Helix-turn-helix domain CJP42_RS24250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CJP42_RS24255 PF00128 Alpha amylase, catalytic domain CJP42_RS24260 PF00155 Aminotransferase class I and II CJP42_RS24265 PF13247 4Fe-4S dicluster domain CJP42_RS24270 PF01614 Bacterial transcriptional regulator CJP42_RS24270 PF09339 IclR helix-turn-helix domain CJP42_RS24275 PF02615 Malate/L-lactate dehydrogenase CJP42_RS24280 PF04074 YhcH/YjgK/YiaL CJP42_RS24285 PF16154 Domain of unknown function (DUF4862) CJP42_RS24290 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CJP42_RS24295 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CJP42_RS24300 PF03480 Bacterial extracellular solute-binding protein, family 7 CJP42_RS24305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJP42_RS24305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJP42_RS24310 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJP42_RS24315 PF01261 Xylose isomerase-like TIM barrel CJP42_RS24320 PF00596 Class II Aldolase and Adducin N-terminal domain CJP42_RS24330 PF07944 Beta-L-arabinofuranosidase, GH127 CJP42_RS24335 PF00171 Aldehyde dehydrogenase family CJP42_RS24340 PF00480 ROK family CJP42_RS24345 PF00009 Elongation factor Tu GTP binding domain CJP42_RS24345 PF03144 Elongation factor Tu domain 2 CJP42_RS24345 PF09106 Elongation factor SelB, winged helix CJP42_RS24345 PF09107 Elongation factor SelB, winged helix CJP42_RS24350 PF03841 L-seryl-tRNA selenium transferase CJP42_RS24350 PF12390 Selenocysteine synthase N terminal CJP42_RS24355 PF13417 Glutathione S-transferase, N-terminal domain CJP42_RS24355 PF00043 Glutathione S-transferase, C-terminal domain CJP42_RS24360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJP42_RS24360 PF02378 Phosphotransferase system, EIIC CJP42_RS24360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJP42_RS24365 PF08125 Mannitol dehydrogenase C-terminal domain CJP42_RS24365 PF01232 Mannitol dehydrogenase Rossmann domain CJP42_RS24370 PF05068 Mannitol repressor CJP42_RS24380 PF10928 Protein of unknown function (DUF2810) CJP42_RS24390 PF11622 Protein of unknown function (DUF3251) CJP42_RS24405 PF02652 L-lactate permease CJP42_RS24410 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS24410 PF07729 FCD domain CJP42_RS24415 PF01070 FMN-dependent dehydrogenase CJP42_RS24420 PF00588 SpoU rRNA Methylase family CJP42_RS24435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJP42_RS24435 PF13378 Enolase C-terminal domain-like CJP42_RS24445 PF00132 Bacterial transferase hexapeptide (six repeats) CJP42_RS24445 PF06426 Serine acetyltransferase, N-terminal CJP42_RS24450 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CJP42_RS24450 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CJP42_RS24455 PF02556 Preprotein translocase subunit SecB CJP42_RS24460 PF00462 Glutaredoxin CJP42_RS24465 PF00581 Rhodanese-like domain CJP42_RS24470 PF01676 Metalloenzyme superfamily CJP42_RS24470 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CJP42_RS24475 PF01551 Peptidase family M23 CJP42_RS24480 PF04748 Divergent polysaccharide deacetylase CJP42_RS24485 PF00535 Glycosyl transferase family 2 CJP42_RS24490 PF08240 Alcohol dehydrogenase GroES-like domain CJP42_RS24490 PF00107 Zinc-binding dehydrogenase CJP42_RS24495 PF00155 Aminotransferase class I and II CJP42_RS24500 PF01370 NAD dependent epimerase/dehydratase family CJP42_RS24505 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJP42_RS24510 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJP42_RS24515 PF04932 O-Antigen ligase CJP42_RS24520 PF00534 Glycosyl transferases group 1 CJP42_RS24530 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) CJP42_RS24535 PF01501 Glycosyl transferase family 8 CJP42_RS24535 PF08437 Glycosyl transferase family 8 C-terminal CJP42_RS24540 PF01501 Glycosyl transferase family 8 CJP42_RS24540 PF08437 Glycosyl transferase family 8 C-terminal CJP42_RS24545 PF13439 Glycosyltransferase Family 4 CJP42_RS24545 PF00534 Glycosyl transferases group 1 CJP42_RS24565 PF00534 Glycosyl transferases group 1 CJP42_RS24565 PF13439 Glycosyltransferase Family 4 CJP42_RS24570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJP42_RS24575 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CJP42_RS24580 PF01467 Cytidylyltransferase-like CJP42_RS24585 PF06827 Zinc finger found in FPG and IleRS CJP42_RS24585 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJP42_RS24585 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJP42_RS24590 PF00471 Ribosomal protein L33 CJP42_RS24595 PF00830 Ribosomal L28 family CJP42_RS24600 PF04002 RadC-like JAB domain CJP42_RS24605 PF04127 DNA / pantothenate metabolism flavoprotein CJP42_RS24605 PF02441 Flavoprotein CJP42_RS24610 PF00692 dUTPase CJP42_RS24615 PF00440 Bacterial regulatory proteins, tetR family CJP42_RS24620 PF00156 Phosphoribosyl transferase domain CJP42_RS24625 PF03725 3' exoribonuclease family, domain 2 CJP42_RS24625 PF01138 3' exoribonuclease family, domain 1 CJP42_RS24635 PF03755 YicC-like family, N-terminal region CJP42_RS24635 PF08340 Domain of unknown function (DUF1732) CJP42_RS24640 PF03466 LysR substrate binding domain CJP42_RS24640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJP42_RS24650 PF03458 UPF0126 domain CJP42_RS24660 PF00625 Guanylate kinase CJP42_RS24665 PF01192 RNA polymerase Rpb6 CJP42_RS24670 PF04607 Region found in RelA / SpoT proteins CJP42_RS24670 PF13291 ACT domain CJP42_RS24670 PF02824 TGS domain CJP42_RS24675 PF00588 SpoU rRNA Methylase family CJP42_RS24675 PF12105 SpoU, rRNA methylase, C-terminal CJP42_RS24680 PF00270 DEAD/DEAH box helicase CJP42_RS24680 PF17191 RecG wedge domain CJP42_RS24680 PF00271 Helicase conserved C-terminal domain CJP42_RS24690 PF00860 Permease family CJP42_RS24695 PF05170 AsmA family CJP42_RS24700 PF13802 Galactose mutarotase-like CJP42_RS24700 PF01055 Glycosyl hydrolases family 31 CJP42_RS24740 PF00196 Bacterial regulatory proteins, luxR family CJP42_RS24765 PF00857 Isochorismatase family CJP42_RS24780 PF00690 Cation transporter/ATPase, N-terminus CJP42_RS24780 PF00689 Cation transporting ATPase, C-terminus CJP42_RS24785 PF02308 MgtC family CJP42_RS24790 PF00892 EamA-like transporter family CJP42_RS24795 PF04754 Putative transposase, YhgA-like CJP42_RS24800 PF07071 KDGP aldolase CJP42_RS24805 PF03841 L-seryl-tRNA selenium transferase CJP42_RS24810 PF03613 PTS system mannose/fructose/sorbose family IID component CJP42_RS24815 PF03609 PTS system sorbose-specific iic component CJP42_RS24820 PF03830 PTS system sorbose subfamily IIB component CJP42_RS24820 PF03610 PTS system fructose IIA component CJP42_RS24835 PF00874 PRD domain CJP42_RS24835 PF00158 Sigma-54 interaction domain CJP42_RS24840 PF00874 PRD domain CJP42_RS24840 PF00158 Sigma-54 interaction domain CJP42_RS24850 PF00232 Glycosyl hydrolase family 1 CJP42_RS24855 PF07690 Major Facilitator Superfamily CJP42_RS24885 PF03611 PTS system sugar-specific permease component CJP42_RS24890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJP42_RS24900 PF00392 Bacterial regulatory proteins, gntR family CJP42_RS24900 PF07702 UTRA domain CJP42_RS24905 PF06711 Protein of unknown function (DUF1198) CJP42_RS24910 PF07690 Major Facilitator Superfamily CJP42_RS24915 PF07690 Major Facilitator Superfamily CJP42_RS24920 PF05231 MASE1 CJP42_RS24920 PF07730 Histidine kinase CJP42_RS24920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJP42_RS24925 PF00072 Response regulator receiver domain CJP42_RS24925 PF00196 Bacterial regulatory proteins, luxR family