CY43_RS00040	SM00852	Probable molybdopterin binding domain
CY43_RS00065	SM00271	DnaJ molecular chaperone homology domain
CY43_RS00090	SM00495	Chitin-binding domain type 3
CY43_RS00090	SM00636	CY43_RS00090
CY43_RS00150	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS00230	SM00904	Riboflavin kinase
CY43_RS00265	SM00448	cheY-homologous receiver domain
CY43_RS00270	SM00091	PAS domain
CY43_RS00270	SM00387	Histidine kinase-like ATPases
CY43_RS00295	SM00764	Citrate lyase ligase C-terminal domain
CY43_RS00335	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CY43_RS00340	SM00851	MGS-like domain
CY43_RS00340	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CY43_RS00385	SM00893	Electron transfer flavoprotein domain
CY43_RS00390	SM00893	Electron transfer flavoprotein domain
CY43_RS00460	SM00650	Ribosomal RNA adenine dimethylases
CY43_RS00480	SM00271	DnaJ molecular chaperone homology domain
CY43_RS00490	SM00487	DEAD-like helicases superfamily
CY43_RS00490	SM00490	helicase superfamily c-terminal domain
CY43_RS00495	SM00486	DNA polymerase type-B family
CY43_RS00510	SM01007	Class II Aldolase and Adducin N-terminal domain
CY43_RS00525	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS00535	SM00382	ATPases associated with a variety of cellular activities
CY43_RS00570	SM01329	CY43_RS00570
CY43_RS00575	SM00917	LeuA allosteric (dimerisation) domain
CY43_RS00600	SM00354	helix_turn _helix lactose operon repressor
CY43_RS00670	SM00842	Cell division protein FtsA
CY43_RS00675	SM00864	Tubulin/FtsZ family, GTPase domain
CY43_RS00675	SM00865	Tubulin/FtsZ family, C-terminal domain
CY43_RS00690	SM00957	SecA DEAD-like domain
CY43_RS00690	SM00958	SecA preprotein cross-linking domain
CY43_RS00720	SM01240	CY43_RS00720
CY43_RS00745	SM00644	CY43_RS00745
CY43_RS00770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS00770	SM00895	CY43_RS00770
CY43_RS00835	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS00835	SM01134	CY43_RS00835
CY43_RS00860	SM00564	beta-propeller repeat
CY43_RS00870	SM00947	Carbonic anhydrase
CY43_RS00875	SM00382	ATPases associated with a variety of cellular activities
CY43_RS00960	SM00487	DEAD-like helicases superfamily
CY43_RS00960	SM00490	helicase superfamily c-terminal domain
CY43_RS00960	SM00847	Helicase associated domain (HA2)  Add an annotation
CY43_RS00975	SM00382	ATPases associated with a variety of cellular activities
CY43_RS01055	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CY43_RS01060	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CY43_RS01085	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CY43_RS01130	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CY43_RS01140	SM00935	Outer membrane protein (OmpH-like)
CY43_RS01170	SM00481	DNA polymerase alpha chain like domain
CY43_RS01195	SM00977	TilS substrate C-terminal domain
CY43_RS01210	SM01322	CY43_RS01210
CY43_RS01250	SM00382	ATPases associated with a variety of cellular activities
CY43_RS01250	SM00930	CY43_RS01250
CY43_RS01315	SM00257	Lysin motif
CY43_RS01320	SM00849	Metallo-beta-lactamase superfamily
CY43_RS01335	SM00479	CY43_RS01335
CY43_RS01380	SM00382	ATPases associated with a variety of cellular activities
CY43_RS01380	SM01086	C-terminal, D2-small domain, of ClpB protein
CY43_RS01640	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CY43_RS01750	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS01835	SM01252	CY43_RS01835
CY43_RS02040	SM00052	Putative diguanylate phosphodiesterase
CY43_RS02045	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS02095	SM00422	helix_turn_helix, mercury resistance
CY43_RS02165	SM00382	ATPases associated with a variety of cellular activities
CY43_RS02190	SM01004	Delta-aminolevulinic acid dehydratase
CY43_RS02195	SM00869	Autotransporter beta-domain
CY43_RS02255	SM00267	diguanylate cyclase
CY43_RS02320	SM00448	cheY-homologous receiver domain
CY43_RS02320	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS02325	SM00091	PAS domain
CY43_RS02325	SM00387	Histidine kinase-like ATPases
CY43_RS02325	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS02330	SM01321	CY43_RS02330
CY43_RS02345	SM00642	Alpha-amylase domain
CY43_RS02370	SM01323	CY43_RS02370
CY43_RS02395	SM00507	HNH nucleases
CY43_RS02450	SM00861	Transketolase, pyrimidine binding domain
CY43_RS02465	SM00981	CY43_RS02465
CY43_RS02480	SM00382	ATPases associated with a variety of cellular activities
CY43_RS02490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS02490	SM00866	CY43_RS02490
CY43_RS02525	SM00671	Sel1-like repeats.
CY43_RS02585	SM00382	ATPases associated with a variety of cellular activities
CY43_RS02585	SM00994	ClpX C4-type zinc finger
CY43_RS02585	SM01086	C-terminal, D2-small domain, of ClpB protein
CY43_RS02590	SM00382	ATPases associated with a variety of cellular activities
CY43_RS02590	SM00464	Found in ATP-dependent protease La (LON)
CY43_RS02595	SM00411	bacterial (prokaryotic) histone like domain
CY43_RS02635	SM00344	helix_turn_helix ASNC type
CY43_RS02640	SM00382	ATPases associated with a variety of cellular activities
CY43_RS02645	SM00382	ATPases associated with a variety of cellular activities
CY43_RS02650	SM00938	Nitrogen regulatory protein P-II
CY43_RS02675	SM00052	Putative diguanylate phosphodiesterase
CY43_RS02695	SM01266	CY43_RS02695
CY43_RS02755	SM00382	ATPases associated with a variety of cellular activities
CY43_RS02765	SM00493	CY43_RS02765
CY43_RS02770	SM00387	Histidine kinase-like ATPases
CY43_RS02835	SM00422	helix_turn_helix, mercury resistance
CY43_RS02845	SM00244	prohibitin homologues
CY43_RS02850	SM00382	ATPases associated with a variety of cellular activities
CY43_RS02865	SM00822	CY43_RS02865
CY43_RS02875	SM00382	ATPases associated with a variety of cellular activities
CY43_RS02895	SM00382	ATPases associated with a variety of cellular activities
CY43_RS02895	SM00930	CY43_RS02895
CY43_RS02905	SM00450	Rhodanese Homology Domain
CY43_RS02920	SM00346	helix_turn_helix isocitrate lyase regulation
CY43_RS02950	SM01001	AIR carboxylase
CY43_RS02965	SM00840	CY43_RS02965
CY43_RS03025	SM00421	helix_turn_helix, Lux Regulon
CY43_RS03025	SM00448	cheY-homologous receiver domain
CY43_RS03040	SM00421	helix_turn_helix, Lux Regulon
CY43_RS03075	SM00387	Histidine kinase-like ATPases
CY43_RS03085	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS03120	SM00869	Autotransporter beta-domain
CY43_RS03125	SM00382	ATPases associated with a variety of cellular activities
CY43_RS03175	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS03205	SM00923	MbtH-like protein
CY43_RS03210	SM00824	Thioesterase
CY43_RS03220	SM00382	ATPases associated with a variety of cellular activities
CY43_RS03260	SM00822	CY43_RS03260
CY43_RS03290	SM00470	ParB-like nuclease domain
CY43_RS03325	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS03390	SM00764	Citrate lyase ligase C-terminal domain
CY43_RS03395	SM00091	PAS domain
CY43_RS03395	SM00387	Histidine kinase-like ATPases
CY43_RS03400	SM00448	cheY-homologous receiver domain
CY43_RS03415	SM00357	Cold shock protein domain
CY43_RS03435	SM00729	Elongator protein 3, MiaB family, Radical SAM
CY43_RS03455	SM00936	Penicillin-binding protein 5, C-terminal domain 
CY43_RS03490	SM00855	Phosphoglycerate mutase family
CY43_RS03520	SM00858	CY43_RS03520
CY43_RS03535	SM00382	ATPases associated with a variety of cellular activities
CY43_RS03555	SM00271	DnaJ molecular chaperone homology domain
CY43_RS03585	SM00382	ATPases associated with a variety of cellular activities
CY43_RS03600	SM00062	Bacterial periplasmic substrate-binding proteins
CY43_RS03610	SM00116	Domain in cystathionine beta-synthase and other proteins.
CY43_RS03610	SM01091	Transporter associated domain
CY43_RS03625	SM00729	Elongator protein 3, MiaB family, Radical SAM
CY43_RS03790	SM00448	cheY-homologous receiver domain
CY43_RS03790	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS03795	SM00387	Histidine kinase-like ATPases
CY43_RS03795	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS03840	SM00796	Allophanate hydrolase subunit 1
CY43_RS03845	SM00797	Allophanate hydrolase subunit 2
CY43_RS03920	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CY43_RS03920	SM01232	CY43_RS03920
CY43_RS03960	SM00861	Transketolase, pyrimidine binding domain
CY43_RS03975	SM00881	CoA binding domain
CY43_RS04145	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04150	SM00855	Phosphoglycerate mutase family
CY43_RS04180	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04205	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS04235	SM00866	CY43_RS04235
CY43_RS04260	SM00729	Elongator protein 3, MiaB family, Radical SAM
CY43_RS04260	SM00876	Biotin and Thiamin Synthesis associated domain
CY43_RS04290	SM00364	Leucine-rich repeats, bacterial type
CY43_RS04290	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CY43_RS04300	SM00729	Elongator protein 3, MiaB family, Radical SAM
CY43_RS04305	SM00852	Probable molybdopterin binding domain
CY43_RS04350	SM00155	Phospholipase D. Active site motifs.
CY43_RS04375	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04390	SM00487	DEAD-like helicases superfamily
CY43_RS04390	SM00490	helicase superfamily c-terminal domain
CY43_RS04395	SM00487	DEAD-like helicases superfamily
CY43_RS04395	SM00488	CY43_RS04395
CY43_RS04395	SM00491	CY43_RS04395
CY43_RS04430	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04440	SM00062	Bacterial periplasmic substrate-binding proteins
CY43_RS04440	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CY43_RS04465	SM00529	Helix-turn-helix diphteria tox regulatory element
CY43_RS04480	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04520	SM00852	Probable molybdopterin binding domain
CY43_RS04530	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04550	SM00729	Elongator protein 3, MiaB family, Radical SAM
CY43_RS04565	SM00893	Electron transfer flavoprotein domain
CY43_RS04570	SM00893	Electron transfer flavoprotein domain
CY43_RS04610	SM00936	Penicillin-binding protein 5, C-terminal domain 
CY43_RS04615	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS04615	SM01134	CY43_RS04615
CY43_RS04620	SM00014	Acid phosphatase homologues
CY43_RS04685	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04725	SM00062	Bacterial periplasmic substrate-binding proteins
CY43_RS04725	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CY43_RS04740	SM00062	Bacterial periplasmic substrate-binding proteins
CY43_RS04740	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CY43_RS04745	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04760	SM00644	CY43_RS04760
CY43_RS04815	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04820	SM00357	Cold shock protein domain
CY43_RS04830	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04830	SM01086	C-terminal, D2-small domain, of ClpB protein
CY43_RS04835	SM01321	CY43_RS04835
CY43_RS04870	SM00316	Ribosomal protein S1-like RNA-binding domain
CY43_RS04885	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04890	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04900	SM00344	helix_turn_helix ASNC type
CY43_RS04905	SM00843	CY43_RS04905
CY43_RS04915	SM00382	ATPases associated with a variety of cellular activities
CY43_RS04925	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS05010	SM00316	Ribosomal protein S1-like RNA-binding domain
CY43_RS05015	SM00411	bacterial (prokaryotic) histone like domain
CY43_RS05020	SM00849	Metallo-beta-lactamase superfamily
CY43_RS05025	SM00382	ATPases associated with a variety of cellular activities
CY43_RS05090	SM00849	Metallo-beta-lactamase superfamily
CY43_RS05110	SM00344	helix_turn_helix ASNC type
CY43_RS05170	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS05190	SM00382	ATPases associated with a variety of cellular activities
CY43_RS05325	SM00635	Bacterial Ig-like domain 2
CY43_RS05450	SM00981	CY43_RS05450
CY43_RS05455	SM00382	ATPases associated with a variety of cellular activities
CY43_RS05525	SM00851	MGS-like domain
CY43_RS05535	SM00881	CoA binding domain
CY43_RS05540	SM00992	Hemimethylated DNA-binding protein YccV like
CY43_RS05545	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CY43_RS05555	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS05620	SM00387	Histidine kinase-like ATPases
CY43_RS05620	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS05625	SM00448	cheY-homologous receiver domain
CY43_RS05625	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS05630	SM00095	Transthyretin
CY43_RS05635	SM00903	Flavin reductase like domain
CY43_RS05645	SM00347	helix_turn_helix multiple antibiotic resistance protein
CY43_RS05685	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS05690	SM00849	Metallo-beta-lactamase superfamily
CY43_RS05705	SM00271	DnaJ molecular chaperone homology domain
CY43_RS05835	SM00481	DNA polymerase alpha chain like domain
CY43_RS05865	SM00421	helix_turn_helix, Lux Regulon
CY43_RS05890	SM00506	Appr-1"-p processing enzyme
CY43_RS05895	SM00155	Phospholipase D. Active site motifs.
CY43_RS05935	SM00450	Rhodanese Homology Domain
CY43_RS05940	SM00867	YceI-like domain 
CY43_RS06020	SM00858	CY43_RS06020
CY43_RS06065	SM00047	Lysozyme subfamily 2
CY43_RS06080	SM00316	Ribosomal protein S1-like RNA-binding domain
CY43_RS06090	SM00363	S4 RNA-binding domain
CY43_RS06130	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CY43_RS06135	SM00822	CY43_RS06135
CY43_RS06145	SM00825	Beta-ketoacyl synthase
CY43_RS06235	SM00257	Lysin motif
CY43_RS06250	SM00382	ATPases associated with a variety of cellular activities
CY43_RS06290	SM00382	ATPases associated with a variety of cellular activities
CY43_RS06305	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CY43_RS06310	SM00387	Histidine kinase-like ATPases
CY43_RS06315	SM00448	cheY-homologous receiver domain
CY43_RS06315	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS06350	SM01329	CY43_RS06350
CY43_RS06375	SM00458	Ricin-type beta-trefoil
CY43_RS06380	SM00357	Cold shock protein domain
CY43_RS06480	SM00382	ATPases associated with a variety of cellular activities
CY43_RS06485	SM00382	ATPases associated with a variety of cellular activities
CY43_RS06515	SM00421	helix_turn_helix, Lux Regulon
CY43_RS06520	SM00422	helix_turn_helix, mercury resistance
CY43_RS06535	SM00830	Chorismate mutase type II
CY43_RS06590	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS06610	SM00267	diguanylate cyclase
CY43_RS06620	SM00763	PrkA AAA domain
CY43_RS06645	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CY43_RS06665	SM00870	CY43_RS06665
CY43_RS06685	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CY43_RS06685	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CY43_RS06685	SM00493	CY43_RS06685
CY43_RS06690	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CY43_RS06770	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS06785	SM01321	CY43_RS06785
CY43_RS06790	SM01060	CY43_RS06790
CY43_RS06850	SM00477	DNA/RNA non-specific endonuclease
CY43_RS06850	SM00892	DNA/RNA non-specific endonuclease
CY43_RS06865	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CY43_RS06890	SM00873	B3/4 domain
CY43_RS06890	SM00874	tRNA synthetase B5 domain
CY43_RS06890	SM00896	Ferredoxin-fold anticodon binding domain
CY43_RS06895	SM00411	bacterial (prokaryotic) histone like domain
CY43_RS06910	SM00382	ATPases associated with a variety of cellular activities
CY43_RS06965	SM00893	Electron transfer flavoprotein domain
CY43_RS06970	SM00893	Electron transfer flavoprotein domain
CY43_RS06975	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS06985	SM00882	Coenzyme A transferase
CY43_RS07050	SM00382	ATPases associated with a variety of cellular activities
CY43_RS07070	SM00257	Lysin motif
CY43_RS07105	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS07110	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS07125	SM00387	Histidine kinase-like ATPases
CY43_RS07125	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS07130	SM00421	helix_turn_helix, Lux Regulon
CY43_RS07130	SM00448	cheY-homologous receiver domain
CY43_RS07145	SM00422	helix_turn_helix, mercury resistance
CY43_RS07150	SM00421	helix_turn_helix, Lux Regulon
CY43_RS07150	SM00448	cheY-homologous receiver domain
CY43_RS07155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS07155	SM00387	Histidine kinase-like ATPases
CY43_RS07155	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS07155	SM00448	cheY-homologous receiver domain
CY43_RS07210	SM00028	Tetratricopeptide repeats
CY43_RS07270	SM00382	ATPases associated with a variety of cellular activities
CY43_RS07345	SM00354	helix_turn _helix lactose operon repressor
CY43_RS07365	SM00479	CY43_RS07365
CY43_RS07415	SM00347	helix_turn_helix multiple antibiotic resistance protein
CY43_RS07440	SM00363	S4 RNA-binding domain
CY43_RS07460	SM00478	endonuclease III
CY43_RS07460	SM00525	CY43_RS07460
CY43_RS07470	SM00900	CY43_RS07470
CY43_RS07550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS07550	SM00387	Histidine kinase-like ATPases
CY43_RS07550	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS07570	SM00448	cheY-homologous receiver domain
CY43_RS07570	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS07590	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CY43_RS07590	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CY43_RS07650	SM00116	Domain in cystathionine beta-synthase and other proteins.
CY43_RS07650	SM00382	ATPases associated with a variety of cellular activities
CY43_RS07685	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS07690	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS07720	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CY43_RS07745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS07745	SM00895	CY43_RS07745
CY43_RS07795	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS07800	SM00347	helix_turn_helix multiple antibiotic resistance protein
CY43_RS07900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS07900	SM00895	CY43_RS07900
CY43_RS07930	SM00347	helix_turn_helix multiple antibiotic resistance protein
CY43_RS07995	SM00642	Alpha-amylase domain
CY43_RS08000	SM00642	Alpha-amylase domain
CY43_RS08005	SM00642	Alpha-amylase domain
CY43_RS08035	SM00919	Malic enzyme, NAD binding domain
CY43_RS08035	SM01274	CY43_RS08035
CY43_RS08040	SM00829	Enoylreductase
CY43_RS08060	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS08095	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS08150	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS08150	SM00895	CY43_RS08150
CY43_RS08155	SM00829	Enoylreductase
CY43_RS08200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS08235	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS08300	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS08300	SM01134	CY43_RS08300
CY43_RS08315	SM00867	YceI-like domain 
CY43_RS08330	SM01150	CY43_RS08330
CY43_RS08340	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CY43_RS08340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS08340	SM00319	Homologues of the ligand binding domain of Tar
CY43_RS08345	SM00829	Enoylreductase
CY43_RS08370	SM00062	Bacterial periplasmic substrate-binding proteins
CY43_RS08380	SM00382	ATPases associated with a variety of cellular activities
CY43_RS08410	SM00382	ATPases associated with a variety of cellular activities
CY43_RS08410	SM00487	DEAD-like helicases superfamily
CY43_RS08410	SM00490	helicase superfamily c-terminal domain
CY43_RS08410	SM00847	Helicase associated domain (HA2)  Add an annotation
CY43_RS08460	SM00890	Domain of unknown function
CY43_RS08495	SM00487	DEAD-like helicases superfamily
CY43_RS08495	SM00490	helicase superfamily c-terminal domain
CY43_RS08505	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CY43_RS08510	SM00463	Small MutS-related domain
CY43_RS08520	SM00100	Cyclic nucleotide-monophosphate binding domain
CY43_RS08520	SM00419	helix_turn_helix, cAMP Regulatory protein
CY43_RS08540	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS08545	SM00873	B3/4 domain
CY43_RS08575	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS08575	SM00871	Bacterial transcription activator, effector binding domain
CY43_RS08595	SM00822	CY43_RS08595
CY43_RS08625	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CY43_RS08635	SM00091	PAS domain
CY43_RS08635	SM00382	ATPases associated with a variety of cellular activities
CY43_RS08650	SM00450	Rhodanese Homology Domain
CY43_RS08675	SM00382	ATPases associated with a variety of cellular activities
CY43_RS08695	SM00382	ATPases associated with a variety of cellular activities
CY43_RS08700	SM00382	ATPases associated with a variety of cellular activities
CY43_RS08735	SM00357	Cold shock protein domain
CY43_RS08735	SM00955	CY43_RS08735
CY43_RS08740	SM00052	Putative diguanylate phosphodiesterase
CY43_RS08740	SM00091	PAS domain
CY43_RS08740	SM00267	diguanylate cyclase
CY43_RS08750	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS08750	SM01134	CY43_RS08750
CY43_RS08765	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CY43_RS08770	SM00028	Tetratricopeptide repeats
CY43_RS08780	SM00014	Acid phosphatase homologues
CY43_RS08805	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CY43_RS08805	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CY43_RS08805	SM00493	CY43_RS08805
CY43_RS08820	SM00822	CY43_RS08820
CY43_RS08830	SM00363	S4 RNA-binding domain
CY43_RS08840	SM00481	DNA polymerase alpha chain like domain
CY43_RS08925	SM00155	Phospholipase D. Active site motifs.
CY43_RS08940	SM00382	ATPases associated with a variety of cellular activities
CY43_RS08945	SM00382	ATPases associated with a variety of cellular activities
CY43_RS08980	SM00528	Domain in histone-like proteins of HNS family
CY43_RS08990	SM00448	cheY-homologous receiver domain
CY43_RS09020	SM00671	Sel1-like repeats.
CY43_RS09040	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS09050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS09050	SM00387	Histidine kinase-like ATPases
CY43_RS09055	SM00421	helix_turn_helix, Lux Regulon
CY43_RS09055	SM00448	cheY-homologous receiver domain
CY43_RS09080	SM01321	CY43_RS09080
CY43_RS09105	SM00937	CY43_RS09105
CY43_RS09125	SM01400	CY43_RS09125
CY43_RS09200	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CY43_RS09230	SM01091	Transporter associated domain
CY43_RS09235	SM01005	Alanine racemase, C-terminal domain
CY43_RS09250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS09310	SM00341	Helicase and RNase D C-terminal
CY43_RS09310	SM00474	3'-5' exonuclease
CY43_RS09330	SM00487	DEAD-like helicases superfamily
CY43_RS09330	SM00491	CY43_RS09330
CY43_RS09360	SM00052	Putative diguanylate phosphodiesterase
CY43_RS09365	SM01091	Transporter associated domain
CY43_RS09410	SM00357	Cold shock protein domain
CY43_RS09435	SM00346	helix_turn_helix isocitrate lyase regulation
CY43_RS09450	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CY43_RS09450	SM00245	tail specific protease
CY43_RS09455	SM00945	ProQ/FINO family
CY43_RS09460	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CY43_RS09560	SM00506	Appr-1"-p processing enzyme
CY43_RS09775	SM01321	CY43_RS09775
CY43_RS09850	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS09855	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS09955	SM00479	CY43_RS09955
CY43_RS10015	SM00257	Lysin motif
CY43_RS10025	SM00382	ATPases associated with a variety of cellular activities
CY43_RS10035	SM00382	ATPases associated with a variety of cellular activities
CY43_RS10040	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CY43_RS10110	SM00836	DALR anticodon binding domain
CY43_RS10110	SM01016	Arginyl tRNA synthetase N terminal dom
CY43_RS10145	SM00448	cheY-homologous receiver domain
CY43_RS10150	SM00448	cheY-homologous receiver domain
CY43_RS10155	SM00138	Methyltransferase, chemotaxis proteins 
CY43_RS10160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CY43_RS10160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS10160	SM00319	Homologues of the ligand binding domain of Tar
CY43_RS10165	SM00260	Two component signalling adaptor domain
CY43_RS10170	SM00073	Histidine Phosphotransfer domain
CY43_RS10170	SM00260	Two component signalling adaptor domain
CY43_RS10170	SM00387	Histidine kinase-like ATPases
CY43_RS10170	SM01231	CY43_RS10170
CY43_RS10290	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CY43_RS10290	SM00465	GIY-YIG type nucleases (URI domain)
CY43_RS10295	SM00421	helix_turn_helix, Lux Regulon
CY43_RS10295	SM00448	cheY-homologous receiver domain
CY43_RS10310	SM00421	helix_turn_helix, Lux Regulon
CY43_RS10330	SM00062	Bacterial periplasmic substrate-binding proteins
CY43_RS10330	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CY43_RS10345	SM01321	CY43_RS10345
CY43_RS10375	SM00642	Alpha-amylase domain
CY43_RS10420	SM00382	ATPases associated with a variety of cellular activities
CY43_RS10470	SM00421	helix_turn_helix, Lux Regulon
CY43_RS10490	SM00267	diguanylate cyclase
CY43_RS10520	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CY43_RS10535	SM00357	Cold shock protein domain
CY43_RS10725	SM00507	HNH nucleases
CY43_RS10730	SM01252	CY43_RS10730
CY43_RS10770	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS10775	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS10780	SM00994	ClpX C4-type zinc finger
CY43_RS10875	SM00671	Sel1-like repeats.
CY43_RS10960	SM00382	ATPases associated with a variety of cellular activities
CY43_RS11040	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS11050	SM00877	CY43_RS11050
CY43_RS11055	SM00877	CY43_RS11055
CY43_RS11085	SM00877	CY43_RS11085
CY43_RS11090	SM00877	CY43_RS11090
CY43_RS11130	SM00877	CY43_RS11130
CY43_RS11135	SM00877	CY43_RS11135
CY43_RS11165	SM00871	Bacterial transcription activator, effector binding domain
CY43_RS11170	SM00936	Penicillin-binding protein 5, C-terminal domain 
CY43_RS11185	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS11195	SM00479	CY43_RS11195
CY43_RS11260	SM00984	UDP binding domain
CY43_RS11265	SM01321	CY43_RS11265
CY43_RS11275	SM01350	CY43_RS11275
CY43_RS11455	SM00226	Low molecular weight phosphatase family
CY43_RS11465	SM01091	Transporter associated domain
CY43_RS11485	SM00052	Putative diguanylate phosphodiesterase
CY43_RS11485	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CY43_RS11485	SM00091	PAS domain
CY43_RS11485	SM00267	diguanylate cyclase
CY43_RS11490	SM00478	endonuclease III
CY43_RS11490	SM01009	AlkA N-terminal domain
CY43_RS11520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS11520	SM00387	Histidine kinase-like ATPases
CY43_RS11520	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS11525	SM00448	cheY-homologous receiver domain
CY43_RS11525	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS11570	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CY43_RS11575	SM01133	CY43_RS11575
CY43_RS11595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS11595	SM00866	CY43_RS11595
CY43_RS11665	SM00448	cheY-homologous receiver domain
CY43_RS11665	SM00850	LytTr DNA-binding domain
CY43_RS11670	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CY43_RS11670	SM00387	Histidine kinase-like ATPases
CY43_RS11675	SM00422	helix_turn_helix, mercury resistance
CY43_RS11690	SM00382	ATPases associated with a variety of cellular activities
CY43_RS11705	SM01217	CY43_RS11705
CY43_RS11815	SM00382	ATPases associated with a variety of cellular activities
CY43_RS11825	SM00354	helix_turn _helix lactose operon repressor
CY43_RS11845	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS11885	SM00518	AP endonuclease family 2
CY43_RS11925	SM00841	Elongation factor P, C-terminal
CY43_RS11925	SM01185	CY43_RS11925
CY43_RS11935	SM00014	Acid phosphatase homologues
CY43_RS11945	SM00052	Putative diguanylate phosphodiesterase
CY43_RS11965	SM00382	ATPases associated with a variety of cellular activities
CY43_RS11985	SM00363	S4 RNA-binding domain
CY43_RS11990	SM00487	DEAD-like helicases superfamily
CY43_RS11990	SM00490	helicase superfamily c-terminal domain
CY43_RS12075	SM00507	HNH nucleases
CY43_RS12085	SM00364	Leucine-rich repeats, bacterial type
CY43_RS12085	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CY43_RS12110	SM00421	helix_turn_helix, Lux Regulon
CY43_RS12110	SM00448	cheY-homologous receiver domain
CY43_RS12150	SM00382	ATPases associated with a variety of cellular activities
CY43_RS12175	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS12195	SM00382	ATPases associated with a variety of cellular activities
CY43_RS12205	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS12220	SM00387	Histidine kinase-like ATPases
CY43_RS12225	SM00421	helix_turn_helix, Lux Regulon
CY43_RS12225	SM00448	cheY-homologous receiver domain
CY43_RS12230	SM00387	Histidine kinase-like ATPases
CY43_RS12230	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS12230	SM00448	cheY-homologous receiver domain
CY43_RS12235	SM00434	DNA Topoisomerase IV
CY43_RS12240	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CY43_RS12250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS12250	SM00895	CY43_RS12250
CY43_RS12330	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CY43_RS12335	SM00346	helix_turn_helix isocitrate lyase regulation
CY43_RS12340	SM00852	Probable molybdopterin binding domain
CY43_RS12405	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CY43_RS12445	SM00260	Two component signalling adaptor domain
CY43_RS12445	SM00448	cheY-homologous receiver domain
CY43_RS12450	SM00327	von Willebrand factor (vWF) type A domain
CY43_RS12490	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS12490	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CY43_RS12495	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CY43_RS12535	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CY43_RS12575	SM00861	Transketolase, pyrimidine binding domain
CY43_RS12605	SM00354	helix_turn _helix lactose operon repressor
CY43_RS12635	SM00382	ATPases associated with a variety of cellular activities
CY43_RS12650	SM00062	Bacterial periplasmic substrate-binding proteins
CY43_RS12655	SM00062	Bacterial periplasmic substrate-binding proteins
CY43_RS12685	SM00382	ATPases associated with a variety of cellular activities
CY43_RS12725	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CY43_RS12750	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS12770	SM00825	Beta-ketoacyl synthase
CY43_RS12810	SM00463	Small MutS-related domain
CY43_RS12860	SM00448	cheY-homologous receiver domain
CY43_RS12865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS12865	SM00387	Histidine kinase-like ATPases
CY43_RS12865	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS12940	SM00052	Putative diguanylate phosphodiesterase
CY43_RS12940	SM00267	diguanylate cyclase
CY43_RS13030	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CY43_RS13030	SM00292	breast cancer carboxy-terminal domain
CY43_RS13030	SM00532	Ligase N family
CY43_RS13035	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CY43_RS13080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS13105	SM00382	ATPases associated with a variety of cellular activities
CY43_RS13125	SM00822	CY43_RS13125
CY43_RS13150	SM00646	CY43_RS13150
CY43_RS13170	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS13175	SM00877	CY43_RS13175
CY43_RS13180	SM00877	CY43_RS13180
CY43_RS13225	SM00877	CY43_RS13225
CY43_RS13250	SM00877	CY43_RS13250
CY43_RS13255	SM01321	CY43_RS13255
CY43_RS13260	SM00919	Malic enzyme, NAD binding domain
CY43_RS13260	SM01274	CY43_RS13260
CY43_RS13270	SM00861	Transketolase, pyrimidine binding domain
CY43_RS13300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS13300	SM00387	Histidine kinase-like ATPases
CY43_RS13345	SM01130	CY43_RS13345
CY43_RS13365	SM01321	CY43_RS13365
CY43_RS13420	SM00052	Putative diguanylate phosphodiesterase
CY43_RS13420	SM00267	diguanylate cyclase
CY43_RS13450	SM00116	Domain in cystathionine beta-synthase and other proteins.
CY43_RS13450	SM01240	CY43_RS13450
CY43_RS13460	SM00869	Autotransporter beta-domain
CY43_RS13495	SM00564	beta-propeller repeat
CY43_RS13515	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS13525	SM00562	CY43_RS13525
CY43_RS13545	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS13555	SM01359	CY43_RS13555
CY43_RS13555	SM01360	CY43_RS13555
CY43_RS13560	SM00450	Rhodanese Homology Domain
CY43_RS13595	SM00271	DnaJ molecular chaperone homology domain
CY43_RS13680	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS13700	SM00938	Nitrogen regulatory protein P-II
CY43_RS13705	SM00382	ATPases associated with a variety of cellular activities
CY43_RS13705	SM00448	cheY-homologous receiver domain
CY43_RS13715	SM00387	Histidine kinase-like ATPases
CY43_RS13715	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS13720	SM01211	CY43_RS13720
CY43_RS13730	SM00062	Bacterial periplasmic substrate-binding proteins
CY43_RS13800	SM00358	Double-stranded RNA binding motif
CY43_RS13800	SM00535	Ribonuclease III family
CY43_RS13835	SM00506	Appr-1"-p processing enzyme
CY43_RS13850	SM00060	Fibronectin type 3 domain
CY43_RS13890	SM00635	Bacterial Ig-like domain 2
CY43_RS14000	SM00507	HNH nucleases
CY43_RS14005	SM01252	CY43_RS14005
CY43_RS14045	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS14050	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS14120	SM00487	DEAD-like helicases superfamily
CY43_RS14120	SM00490	helicase superfamily c-terminal domain
CY43_RS14140	SM00986	Uracil DNA glycosylase superfamily
CY43_RS14140	SM00987	UreE urease accessory protein, C-terminal domain 
CY43_RS14145	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CY43_RS14155	SM01144	CY43_RS14155
CY43_RS14160	SM00881	CoA binding domain
CY43_RS14165	SM00155	Phospholipase D. Active site motifs.
CY43_RS14205	SM00382	ATPases associated with a variety of cellular activities
CY43_RS14205	SM01086	C-terminal, D2-small domain, of ClpB protein
CY43_RS14215	SM00363	S4 RNA-binding domain
CY43_RS14230	SM00830	Chorismate mutase type II
CY43_RS14240	SM00830	Chorismate mutase type II
CY43_RS14255	SM00267	diguanylate cyclase
CY43_RS14280	SM00382	ATPases associated with a variety of cellular activities
CY43_RS14280	SM00962	SRP54-type protein, GTPase domain
CY43_RS14280	SM00963	SRP54-type protein, helical bundle domain
CY43_RS14290	SM01091	Transporter associated domain
CY43_RS14345	SM00382	ATPases associated with a variety of cellular activities
CY43_RS14400	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS14435	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CY43_RS14535	SM00382	ATPases associated with a variety of cellular activities
CY43_RS14585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS14585	SM00387	Histidine kinase-like ATPases
CY43_RS14585	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS14590	SM00448	cheY-homologous receiver domain
CY43_RS14590	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS14640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS14640	SM00895	CY43_RS14640
CY43_RS14645	SM00257	Lysin motif
CY43_RS14645	SM00749	bacterial OsmY and nodulation domain
CY43_RS14655	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CY43_RS14660	SM00450	Rhodanese Homology Domain
CY43_RS14670	SM00528	Domain in histone-like proteins of HNS family
CY43_RS14690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS14725	SM00382	ATPases associated with a variety of cellular activities
CY43_RS14745	SM00347	helix_turn_helix multiple antibiotic resistance protein
CY43_RS14815	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CY43_RS14825	SM00382	ATPases associated with a variety of cellular activities
CY43_RS14870	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS14870	SM01134	CY43_RS14870
CY43_RS14880	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CY43_RS14880	SM00382	ATPases associated with a variety of cellular activities
CY43_RS14885	SM00849	Metallo-beta-lactamase superfamily
CY43_RS14980	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CY43_RS14980	SM00382	ATPases associated with a variety of cellular activities
CY43_RS14995	SM00382	ATPases associated with a variety of cellular activities
CY43_RS15020	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS15065	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS15075	SM00194	Protein tyrosine phosphatase, catalytic domain
CY43_RS15075	SM00404	Protein tyrosine phosphatase, catalytic domain motif
CY43_RS15155	SM00382	ATPases associated with a variety of cellular activities
CY43_RS15180	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS15230	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CY43_RS15230	SM00534	ATPase domain of DNA mismatch repair MUTS family
CY43_RS15265	SM01007	Class II Aldolase and Adducin N-terminal domain
CY43_RS15280	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS15280	SM01134	CY43_RS15280
CY43_RS15285	SM00347	helix_turn_helix multiple antibiotic resistance protein
CY43_RS15310	SM00257	Lysin motif
CY43_RS15380	SM01101	CY43_RS15380
CY43_RS15405	SM00487	DEAD-like helicases superfamily
CY43_RS15435	SM00849	Metallo-beta-lactamase superfamily
CY43_RS15445	SM01192	CY43_RS15445
CY43_RS15445	SM01193	CY43_RS15445
CY43_RS15470	SM00954	Region found in RelA / SpoT proteins
CY43_RS15480	SM00073	Histidine Phosphotransfer domain
CY43_RS15480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS15480	SM00387	Histidine kinase-like ATPases
CY43_RS15480	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS15480	SM00448	cheY-homologous receiver domain
CY43_RS15490	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CY43_RS15495	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CY43_RS15545	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CY43_RS15545	SM00475	5'-3' exonuclease
CY43_RS15555	SM01007	Class II Aldolase and Adducin N-terminal domain
CY43_RS15580	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS15580	SM01134	CY43_RS15580
CY43_RS15625	SM00925	MltA specific insert domain
CY43_RS15640	SM00646	CY43_RS15640
CY43_RS15650	SM00382	ATPases associated with a variety of cellular activities
CY43_RS15705	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CY43_RS15720	SM00927	DNA mismatch repair enzyme MutH
CY43_RS15745	SM00563	Phosphate acyltransferases
CY43_RS15750	SM00354	helix_turn _helix lactose operon repressor
CY43_RS15755	SM00354	helix_turn _helix lactose operon repressor
CY43_RS15885	SM00257	Lysin motif
CY43_RS15900	SM00937	CY43_RS15900
CY43_RS15950	SM01022	CY43_RS15950
CY43_RS15990	SM01011	Aminopeptidase P, N-terminal domain
CY43_RS16055	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CY43_RS16075	SM00382	ATPases associated with a variety of cellular activities
CY43_RS16080	SM00382	ATPases associated with a variety of cellular activities
CY43_RS16085	SM00861	Transketolase, pyrimidine binding domain
CY43_RS16115	SM00829	Enoylreductase
CY43_RS16130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS16130	SM00895	CY43_RS16130
CY43_RS16165	SM00731	SprT homologues.
CY43_RS16190	SM00732	Likely ribonuclease with RNase H fold.
CY43_RS16195	SM00346	helix_turn_helix isocitrate lyase regulation
CY43_RS16200	SM00382	ATPases associated with a variety of cellular activities
CY43_RS16215	SM01152	CY43_RS16215
CY43_RS16225	SM00729	Elongator protein 3, MiaB family, Radical SAM
CY43_RS16235	SM00870	CY43_RS16235
CY43_RS16255	SM00478	endonuclease III
CY43_RS16255	SM00525	CY43_RS16255
CY43_RS16330	SM00421	helix_turn_helix, Lux Regulon
CY43_RS16400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CY43_RS16470	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CY43_RS16470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS16525	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS16555	SM00729	Elongator protein 3, MiaB family, Radical SAM
CY43_RS16580	SM00563	Phosphate acyltransferases
CY43_RS16585	SM00434	DNA Topoisomerase IV
CY43_RS16590	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS16590	SM00871	Bacterial transcription activator, effector binding domain
CY43_RS16600	SM00448	cheY-homologous receiver domain
CY43_RS16600	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS16605	SM00387	Histidine kinase-like ATPases
CY43_RS16605	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS16620	SM00387	Histidine kinase-like ATPases
CY43_RS16620	SM00433	TopoisomeraseII
CY43_RS16710	SM00244	prohibitin homologues
CY43_RS16725	SM01118	CY43_RS16725
CY43_RS16730	SM00287	Bacterial SH3 domain homologues
CY43_RS16735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CY43_RS16745	SM00905	Dihydroneopterin aldolase
CY43_RS16750	SM01207	CY43_RS16750
CY43_RS16765	SM00400	zinc finger
CY43_RS16765	SM00493	CY43_RS16765
CY43_RS16765	SM00766	DNA primase DnaG DnaB-binding
CY43_RS16795	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CY43_RS16795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS16800	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CY43_RS16800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CY43_RS16970	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS16970	SM01134	CY43_RS16970
CY43_RS17015	SM00829	Enoylreductase
CY43_RS17020	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS17020	SM01134	CY43_RS17020
CY43_RS17045	SM00749	bacterial OsmY and nodulation domain
CY43_RS17065	SM00465	GIY-YIG type nucleases (URI domain)
CY43_RS17110	SM00487	DEAD-like helicases superfamily
CY43_RS17110	SM00490	helicase superfamily c-terminal domain
CY43_RS17115	SM00028	Tetratricopeptide repeats
CY43_RS17120	SM00316	Ribosomal protein S1-like RNA-binding domain
CY43_RS17120	SM00322	K homology RNA-binding domain
CY43_RS17125	SM01387	CY43_RS17125
CY43_RS17145	SM00316	Ribosomal protein S1-like RNA-binding domain
CY43_RS17145	SM00322	K homology RNA-binding domain
CY43_RS17190	SM00382	ATPases associated with a variety of cellular activities
CY43_RS17200	SM01103	CY43_RS17200
CY43_RS17280	SM00382	ATPases associated with a variety of cellular activities
CY43_RS17310	SM00382	ATPases associated with a variety of cellular activities
CY43_RS17355	SM00073	Histidine Phosphotransfer domain
CY43_RS17355	SM00091	PAS domain
CY43_RS17355	SM00387	Histidine kinase-like ATPases
CY43_RS17355	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS17355	SM00448	cheY-homologous receiver domain
CY43_RS17360	SM00729	Elongator protein 3, MiaB family, Radical SAM
CY43_RS17415	SM01130	CY43_RS17415
CY43_RS17420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS17420	SM00895	CY43_RS17420
CY43_RS17460	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CY43_RS17465	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CY43_RS17505	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS17505	SM00895	CY43_RS17505
CY43_RS17510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS17570	SM00316	Ribosomal protein S1-like RNA-binding domain
CY43_RS17600	SM00052	Putative diguanylate phosphodiesterase
CY43_RS17600	SM00267	diguanylate cyclase
CY43_RS17605	SM00829	Enoylreductase
CY43_RS17625	SM00878	Biotin carboxylase C-terminal domain
CY43_RS17665	SM00052	Putative diguanylate phosphodiesterase
CY43_RS17665	SM00267	diguanylate cyclase
CY43_RS17785	SM00422	helix_turn_helix, mercury resistance
CY43_RS17800	SM00662	RNA polymerases D
CY43_RS17805	SM00363	S4 RNA-binding domain
CY43_RS17805	SM01390	CY43_RS17805
CY43_RS17870	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CY43_RS17875	SM01374	CY43_RS17875
CY43_RS17895	SM00322	K homology RNA-binding domain
CY43_RS17910	SM01382	CY43_RS17910
CY43_RS17910	SM01383	CY43_RS17910
CY43_RS17930	SM01403	CY43_RS17930
CY43_RS17955	SM00838	Elongation factor G C-terminus
CY43_RS17955	SM00889	Elongation factor G, domain IV
CY43_RS18020	SM00382	ATPases associated with a variety of cellular activities
CY43_RS18055	SM00100	Cyclic nucleotide-monophosphate binding domain
CY43_RS18055	SM00419	helix_turn_helix, cAMP Regulatory protein
CY43_RS18115	SM00869	Autotransporter beta-domain
CY43_RS18120	SM01321	CY43_RS18120
CY43_RS18165	SM00965	Secretin and TonB N terminus short domain
CY43_RS18210	SM00363	S4 RNA-binding domain
CY43_RS18230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS18230	SM00387	Histidine kinase-like ATPases
CY43_RS18230	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS18235	SM00448	cheY-homologous receiver domain
CY43_RS18235	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS18245	SM00316	Ribosomal protein S1-like RNA-binding domain
CY43_RS18245	SM00732	Likely ribonuclease with RNase H fold.
CY43_RS18250	SM00899	CY43_RS18250
CY43_RS18300	SM00421	helix_turn_helix, Lux Regulon
CY43_RS18330	SM00382	ATPases associated with a variety of cellular activities
CY43_RS18335	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS18335	SM01134	CY43_RS18335
CY43_RS18345	SM00450	Rhodanese Homology Domain
CY43_RS18380	SM01130	CY43_RS18380
CY43_RS18385	SM00346	helix_turn_helix isocitrate lyase regulation
CY43_RS18405	SM00642	Alpha-amylase domain
CY43_RS18410	SM00642	Alpha-amylase domain
CY43_RS18415	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CY43_RS18430	SM00354	helix_turn _helix lactose operon repressor
CY43_RS18450	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS18485	SM00382	ATPases associated with a variety of cellular activities
CY43_RS18515	SM00382	ATPases associated with a variety of cellular activities
CY43_RS18520	SM00382	ATPases associated with a variety of cellular activities
CY43_RS18565	SM00382	ATPases associated with a variety of cellular activities
CY43_RS18570	SM00382	ATPases associated with a variety of cellular activities
CY43_RS18570	SM00962	SRP54-type protein, GTPase domain
CY43_RS18570	SM00963	SRP54-type protein, helical bundle domain
CY43_RS18600	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CY43_RS18600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS18600	SM00319	Homologues of the ligand binding domain of Tar
CY43_RS18645	SM00382	ATPases associated with a variety of cellular activities
CY43_RS18690	SM00014	Acid phosphatase homologues
CY43_RS18705	SM00870	CY43_RS18705
CY43_RS18725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS18725	SM00866	CY43_RS18725
CY43_RS18745	SM00421	helix_turn_helix, Lux Regulon
CY43_RS18770	SM00052	Putative diguanylate phosphodiesterase
CY43_RS18790	SM00052	Putative diguanylate phosphodiesterase
CY43_RS18790	SM00267	diguanylate cyclase
CY43_RS18795	SM00028	Tetratricopeptide repeats
CY43_RS18840	SM01321	CY43_RS18840
CY43_RS18860	SM00382	ATPases associated with a variety of cellular activities
CY43_RS18865	SM00382	ATPases associated with a variety of cellular activities
CY43_RS18895	SM00354	helix_turn _helix lactose operon repressor
CY43_RS18980	SM00357	Cold shock protein domain
CY43_RS19040	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS19045	SM00047	Lysozyme subfamily 2
CY43_RS19055	SM00642	Alpha-amylase domain
CY43_RS19070	SM00346	helix_turn_helix isocitrate lyase regulation
CY43_RS19110	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CY43_RS19120	SM01007	Class II Aldolase and Adducin N-terminal domain
CY43_RS19125	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS19200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS19200	SM00895	CY43_RS19200
CY43_RS19215	SM00354	helix_turn _helix lactose operon repressor
CY43_RS19220	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CY43_RS19230	SM00971	Serine acetyltransferase, N-terminal
CY43_RS19250	SM00450	Rhodanese Homology Domain
CY43_RS19275	SM00829	Enoylreductase
CY43_RS19365	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CY43_RS19365	SM01232	CY43_RS19365
CY43_RS19420	SM00849	Metallo-beta-lactamase superfamily
CY43_RS19430	SM00532	Ligase N family
CY43_RS19435	SM00072	Guanylate kinase homologues.
CY43_RS19440	SM01409	CY43_RS19440
CY43_RS19445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CY43_RS19445	SM00954	Region found in RelA / SpoT proteins
CY43_RS19455	SM00487	DEAD-like helicases superfamily
CY43_RS19455	SM00490	helicase superfamily c-terminal domain
CY43_RS19520	SM00869	Autotransporter beta-domain
CY43_RS19530	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS19595	SM00382	ATPases associated with a variety of cellular activities
CY43_RS19620	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS19655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS19655	SM00866	CY43_RS19655
CY43_RS19675	SM00387	Histidine kinase-like ATPases
CY43_RS19680	SM00421	helix_turn_helix, Lux Regulon
CY43_RS19680	SM00448	cheY-homologous receiver domain
CY43_RS19700	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS19700	SM01134	CY43_RS19700
CY43_RS19830	SM00382	ATPases associated with a variety of cellular activities
CY43_RS19835	SM01235	CY43_RS19835
CY43_RS19855	SM00448	cheY-homologous receiver domain
CY43_RS19855	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS19865	SM00073	Histidine Phosphotransfer domain
CY43_RS19865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS19865	SM00387	Histidine kinase-like ATPases
CY43_RS19865	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS19865	SM00448	cheY-homologous receiver domain
CY43_RS19875	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CY43_RS19890	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS19890	SM00895	CY43_RS19890
CY43_RS19905	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CY43_RS19915	SM00387	Histidine kinase-like ATPases
CY43_RS19915	SM00433	TopoisomeraseII
CY43_RS19925	SM00480	DNA polymerase III beta subunit
CY43_RS19930	SM00382	ATPases associated with a variety of cellular activities
CY43_RS19930	SM00760	Bacterial dnaA protein helix-turn-helix domain
CY43_RS19945	SM01234	CY43_RS19945
CY43_RS20060	SM00382	ATPases associated with a variety of cellular activities
CY43_RS20065	SM00857	Resolvase, N terminal domain
CY43_RS20210	SM00382	ATPases associated with a variety of cellular activities
CY43_RS20265	SM00382	ATPases associated with a variety of cellular activities
CY43_RS20310	SM01228	CY43_RS20310
CY43_RS20320	SM00344	helix_turn_helix ASNC type
CY43_RS20330	SM00327	von Willebrand factor (vWF) type A domain
CY43_RS20335	SM00382	ATPases associated with a variety of cellular activities
CY43_RS20350	SM00382	ATPases associated with a variety of cellular activities
CY43_RS20370	SM00354	helix_turn _helix lactose operon repressor
CY43_RS20380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS20380	SM00895	CY43_RS20380
CY43_RS20425	SM00382	ATPases associated with a variety of cellular activities
CY43_RS20500	SM00487	DEAD-like helicases superfamily
CY43_RS20500	SM00490	helicase superfamily c-terminal domain
CY43_RS20510	SM00357	Cold shock protein domain
CY43_RS20510	SM00382	ATPases associated with a variety of cellular activities
CY43_RS20510	SM00959	Rho termination factor, N-terminal domain
CY43_RS20530	SM00984	UDP binding domain
CY43_RS20640	SM01219	CY43_RS20640
CY43_RS20710	SM00341	Helicase and RNase D C-terminal
CY43_RS20710	SM00487	DEAD-like helicases superfamily
CY43_RS20710	SM00490	helicase superfamily c-terminal domain
CY43_RS20710	SM00956	CY43_RS20710
CY43_RS20805	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CY43_RS20905	SM00563	Phosphate acyltransferases
CY43_RS20915	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CY43_RS20915	SM00474	3'-5' exonuclease
CY43_RS20915	SM00475	5'-3' exonuclease
CY43_RS20915	SM00482	DNA polymerase A domain
CY43_RS20935	SM00729	Elongator protein 3, MiaB family, Radical SAM
CY43_RS20940	SM00382	ATPases associated with a variety of cellular activities
CY43_RS20940	SM00448	cheY-homologous receiver domain
CY43_RS20945	SM00091	PAS domain
CY43_RS20945	SM00387	Histidine kinase-like ATPases
CY43_RS20945	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS20950	SM01230	CY43_RS20950
CY43_RS20970	SM00729	Elongator protein 3, MiaB family, Radical SAM
CY43_RS21020	SM01133	CY43_RS21020
CY43_RS21035	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS21035	SM01134	CY43_RS21035
CY43_RS21060	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS21080	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS21105	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS21135	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS21150	SM01007	Class II Aldolase and Adducin N-terminal domain
CY43_RS21165	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS21170	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS21190	SM01321	CY43_RS21190
CY43_RS21225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS21225	SM00387	Histidine kinase-like ATPases
CY43_RS21225	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS21230	SM00448	cheY-homologous receiver domain
CY43_RS21230	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS21275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CY43_RS21275	SM00866	CY43_RS21275
CY43_RS21300	SM00382	ATPases associated with a variety of cellular activities
CY43_RS21320	SM01133	CY43_RS21320
CY43_RS21385	SM00382	ATPases associated with a variety of cellular activities
CY43_RS21385	SM01086	C-terminal, D2-small domain, of ClpB protein
CY43_RS21400	SM00354	helix_turn _helix lactose operon repressor
CY43_RS21405	SM00487	DEAD-like helicases superfamily
CY43_RS21405	SM00490	helicase superfamily c-terminal domain
CY43_RS21515	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS21535	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CY43_RS21660	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CY43_RS21660	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CY43_RS21665	SM00649	Ribosomal protein L11/L12
CY43_RS21690	SM00663	RNA polymerase I subunit A N-terminus
CY43_RS21715	SM00876	Biotin and Thiamin Synthesis associated domain
CY43_RS21770	SM00411	bacterial (prokaryotic) histone like domain
CY43_RS21785	SM00387	Histidine kinase-like ATPases
CY43_RS21785	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS21790	SM00382	ATPases associated with a variety of cellular activities
CY43_RS21790	SM00448	cheY-homologous receiver domain
CY43_RS21795	SM01209	CY43_RS21795
CY43_RS21795	SM01210	CY43_RS21795
CY43_RS21800	SM00798	AICARFT/IMPCHase bienzyme
CY43_RS21800	SM00851	MGS-like domain
CY43_RS21855	SM01022	CY43_RS21855
CY43_RS21860	SM00346	helix_turn_helix isocitrate lyase regulation
CY43_RS21865	SM01018	B12 binding domain
CY43_RS21890	SM00363	S4 RNA-binding domain
CY43_RS22085	SM00382	ATPases associated with a variety of cellular activities
CY43_RS22110	SM00563	Phosphate acyltransferases
CY43_RS22160	SM00829	Enoylreductase
CY43_RS22165	SM00382	ATPases associated with a variety of cellular activities
CY43_RS22170	SM01005	Alanine racemase, C-terminal domain
CY43_RS22245	SM00382	ATPases associated with a variety of cellular activities
CY43_RS22255	SM00052	Putative diguanylate phosphodiesterase
CY43_RS22260	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS22265	SM00422	helix_turn_helix, mercury resistance
CY43_RS22345	SM00028	Tetratricopeptide repeats
CY43_RS22355	SM00671	Sel1-like repeats.
CY43_RS22365	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS22400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS22400	SM00387	Histidine kinase-like ATPases
CY43_RS22400	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS22405	SM00448	cheY-homologous receiver domain
CY43_RS22405	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS22420	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS22435	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS22465	SM00448	cheY-homologous receiver domain
CY43_RS22470	SM00091	PAS domain
CY43_RS22470	SM00387	Histidine kinase-like ATPases
CY43_RS22475	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CY43_RS22515	SM00421	helix_turn_helix, Lux Regulon
CY43_RS22520	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS22540	SM00014	Acid phosphatase homologues
CY43_RS22550	SM00422	helix_turn_helix, mercury resistance
CY43_RS22600	SM00883	Chaperonin 10 Kd subunit
CY43_RS22625	SM00841	Elongation factor P, C-terminal
CY43_RS22625	SM01185	CY43_RS22625
CY43_RS22640	SM00421	helix_turn_helix, Lux Regulon
CY43_RS22705	SM00479	CY43_RS22705
CY43_RS22710	SM00062	Bacterial periplasmic substrate-binding proteins
CY43_RS22710	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CY43_RS22745	SM00646	CY43_RS22745
CY43_RS22750	SM00853	MutL C terminal dimerisation domain
CY43_RS22750	SM01340	CY43_RS22750
CY43_RS22770	SM00244	prohibitin homologues
CY43_RS22775	SM00244	prohibitin homologues
CY43_RS22785	SM00788	Adenylosuccinate synthetase
CY43_RS22795	SM00316	Ribosomal protein S1-like RNA-binding domain
CY43_RS22795	SM00357	Cold shock protein domain
CY43_RS22795	SM00955	CY43_RS22795
CY43_RS22800	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CY43_RS22860	SM00420	helix_turn_helix, Deoxyribose operon repressor
CY43_RS22860	SM01134	CY43_RS22860
CY43_RS22885	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CY43_RS22895	SM01007	Class II Aldolase and Adducin N-terminal domain
CY43_RS22990	SM01091	Transporter associated domain
CY43_RS23075	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS23220	SM00642	Alpha-amylase domain
CY43_RS23230	SM00354	helix_turn _helix lactose operon repressor
CY43_RS23235	SM00831	Cation transporter/ATPase, N-terminus
CY43_RS23355	SM00354	helix_turn _helix lactose operon repressor
CY43_RS23380	SM00829	Enoylreductase
CY43_RS23420	SM00382	ATPases associated with a variety of cellular activities
CY43_RS23595	SM00487	DEAD-like helicases superfamily
CY43_RS23595	SM00490	helicase superfamily c-terminal domain
CY43_RS23615	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CY43_RS23630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CY43_RS23630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS23630	SM00319	Homologues of the ligand binding domain of Tar
CY43_RS23635	SM00382	ATPases associated with a variety of cellular activities
CY43_RS23680	SM00382	ATPases associated with a variety of cellular activities
CY43_RS23700	SM00421	helix_turn_helix, Lux Regulon
CY43_RS23705	SM00421	helix_turn_helix, Lux Regulon
CY43_RS23720	SM00267	diguanylate cyclase
CY43_RS23770	SM00749	bacterial OsmY and nodulation domain
CY43_RS23800	SM01133	CY43_RS23800
CY43_RS23805	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CY43_RS23860	SM00382	ATPases associated with a variety of cellular activities
CY43_RS23865	SM00530	Helix-turn-helix XRE-family like proteins 
CY43_RS23870	SM00382	ATPases associated with a variety of cellular activities
CY43_RS23890	SM00855	Phosphoglycerate mutase family
CY43_RS23895	SM00342	helix_turn_helix, arabinose operon control protein
CY43_RS23895	SM00871	Bacterial transcription activator, effector binding domain
CY43_RS23905	SM00448	cheY-homologous receiver domain
CY43_RS23905	SM00862	Transcriptional regulatory protein, C terminal
CY43_RS23910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CY43_RS23910	SM00387	Histidine kinase-like ATPases
CY43_RS23910	SM00388	His Kinase A (phosphoacceptor) domain
CY43_RS23955	SM00448	cheY-homologous receiver domain
CY43_RS23955	SM00862	Transcriptional regulatory protein, C terminal
