      repHI2 NONE
NFH28_RS25610 NONE
NFH28_RS25615 NONE
NFH28_RS25825 NONE
NFH28_RS25620 NONE
        dnaN    2946 ..    2961 +  -2.4  -2.75844   TAGAATCTGAAAAGG              GGCTGG TTTA CTTGCC               ATTTCGCCTCCCGGC  40 38
        recF NONE
NFH28_RS25630 NONE
NFH28_RS25635 NONE
        gyrB    6605 ..    6640 + -12.6  -2.77523   ATATTTAACCTGCCT    TAAT-CCCCGGCCTACC GCT GGTTGGCCGGGGCATCA    TGATGTTCATCGACA  82 33
NFH28_RS24380    9673 ..    9695 +    -4   -4.7497   CCGCGTTTGCTCTGC           CGCGTTCCTG CTT CGGGAACCAG           TTTTTAATAAATACG  72 89
        yidA NONE
NFH28_RS24385 NONE
        dgoR NONE
NFH28_RS24390 NONE
NFH28_RS00050 NONE
NFH28_RS24395 NONE
NFH28_RS00055 NONE
NFH28_RS24400 NONE
        dgoD   14853 ..   14863 +  -2.4  -2.82327   ACAAACGTCGCCCTC                 CGGG CAA CCCA                 ATTTAAATATAAAAA  40 60
NFH28_RS24405 NONE
NFH28_RS24410 NONE
NFH28_RS24415 NONE
NFH28_RS00065 NONE
NFH28_RS24420   16917 ..   16943 +  -8.8  -3.05384   CGTGAGCATTTCAGC         GGTAATACGCTG CGT CAGCATATTATC         TTCAATCAGCAACAA  66 35
NFH28_RS24425   18317 ..   18333 +  -4.3   -3.6692   CGGTGTCTTCGGCAT              CGCTCAG CCC TTGCGCG              TCTTTTAAGGTCACA  55 16
NFH28_RS24430   18982 ..   18999 +  -4.1  -2.91276   AGCCATAATCTGCGG             GTCAGTG AAGG CGTTGAC              ATTTATGCGCCGCGG  46 254
NFH28_RS24435 NONE
NFH28_RS24440 NONE
        torT NONE
NFH28_RS24445   20846 ..   20864 +  -3.8  -3.35597   GTATCCCGTTCATCC             TGACCAGT GAC GCTGTTCA             TATTTGCGGAATAAG  50 35
NFH28_RS24450 NONE
        torC NONE
NFH28_RS24455 NONE
NFH28_RS24460 NONE
        torA NONE
NFH28_RS24465 NONE
NFH28_RS24470 NONE
        torD NONE
NFH28_RS24475 NONE
NFH28_RS24480 NONE
NFH28_RS24485 NONE
NFH28_RS00100 NONE
NFH28_RS24490   27456 ..   27474 +  -7.3  -2.86177   CCGCCGCCTGGCGCT             GACCGGC GGGGG GCCGGGC             TGTGATGTGGCGTGT  59 267
NFH28_RS24495 NONE
        ccmB NONE
NFH28_RS24500 NONE
NFH28_RS00115   28918 ..   28930 +  -6.2  -2.50493   ACTGAAAAGGGGGCA                CCGG TGAGT CCGG                CATTTTCATCGTGGA  53 19
        ccmD NONE
NFH28_RS24505 NONE
NFH28_RS24510 NONE
        ccmE NONE
NFH28_RS24515   29943 ..   29964 + -11.5  -2.78463   TGGCGGTGGCGGTGT           TCAGCCGGC AGGT GCCGGCGGA            TATCGTCGCCCGGGT  77 156
NFH28_RS24520   30340 ..   30352 +  -4.8  -3.89822   GTTCTGGGACCCGGT                GGAG AACGC CTCC                TTTATGCCGTGGCTG  61 19
NFH28_RS24525 NONE
NFH28_RS24530 NONE
        dsbE NONE
NFH28_RS00140 NONE
NFH28_RS24535 NONE
NFH28_RS24545 NONE
NFH28_RS00145   34649 ..   34660 +  -2.2  -4.11235   AGGATGGCCAACGAT                TTGG TGCC CCAG                 TTTGTCTCATCGTTA  56 196
        ibpA   35544 ..   35560 + -11.5  -2.80113   TAACTGATTCCGTCG              GGTCGCG TTG CGCGGCC              TGTCATCCCATGCTC  77 34
        ibpB   36089 ..   36110 + -17.3  -5.60993   TGAGCTCCTTGCCTT           GCCCCGCCA GAGA TGGCGGGGC            TTTTTTTATGCCACG 100 41
NFH28_RS24570 NONE
NFH28_RS00165 NONE
NFH28_RS00170 NONE
NFH28_RS24575 NONE
NFH28_RS00175 NONE
NFH28_RS24580 NONE
NFH28_RS00180 NONE
NFH28_RS24585   39613 ..   39653 + -11.9  -3.35046   CACAGGCCTGATAAG C-GTAGCGCCATCAGGCG ATGGCG TGCCGGATGGCGCTGCCG  TCTTTCCGGCACTGA  85 39
NFH28_RS24590 NONE
NFH28_RS24595   40496 ..   40517 +  -3.7  -2.66964   ATCGATAGCCCCAGA           TTGCCGGTTG AAC CGAC-GGCGA           TACTGTACTGGCTGA  44 23
NFH28_RS24600 NONE
NFH28_RS24605   41666 ..   41685 +    -7  -4.07687   CGGTAAACAGCGTTG            CGCCCAGC GACG GCAGGGTG             TTTTCGGCGCGCACT  70 56
NFH28_RS24610   42517 ..   42535 +  -2.3  -3.87355   TTTTACTTCATCTAT             GTGCGGA TTTTT TCAGCGC             GTTTTTTTACACTTC  53 172
NFH28_RS24615 NONE
NFH28_RS24620 NONE
        dsdC NONE
NFH28_RS00200   45141 ..   45158 +  -5.5  -4.42386   GGTAACAGTTAAATG             CGCCGTT ACCA AACAGCG              TTTTATAGCTGGCGA  70 515
        ivbL   47766 ..   47790 + -10.7  -5.63517   CACACGATTCCAAAA         CCCCGC-CGG CGCAAA CCGGGCGGGG          TTTTTTGTTTAAGAC 100 52
        ilvB NONE
        ilvN   50071 ..   50101 +  -5.4  -2.73159   CAGCTCACGCCAAAA       TGTTCATGTACGCC GCT GGCGGAAATAAACA       CTTTGCGCGGATTGA  47 268
        rbsK NONE
        fucP NONE
NFH28_RS00255   54255 ..   54279 + -12.2  -5.96219   AGGCTTGAACAGCCG          CGCGCTTATC GTTAA GGTAAGCGCG          TTTTTTTTATCCATC 100 48
        uhpA NONE
NFH28_RS24665 NONE
NFH28_RS24670 NONE
        uhpB   56377 ..   56389 +  -5.5  -3.27525   CGCGGGTGAGCGTCT                CGTTG CCC CAGCG                TTACGTTTAAGGAAG  54 3
NFH28_RS24675 NONE
NFH28_RS00270 NONE
        trhH NONE
        uhpT NONE
NFH28_RS00280 NONE
NFH28_RS00285 NONE
NFH28_RS00290 NONE
NFH28_RS00295 NONE
NFH28_RS24685 NONE
NFH28_RS00300 NONE
NFH28_RS24690 NONE
NFH28_RS00305 NONE
NFH28_RS00310 NONE
NFH28_RS00315 NONE
NFH28_RS24705   66612 ..   66624 +  -3.3  -3.06815   CATCTTTTATCGTGT                GGGGC TTC GCTTC                TCTGTTAAACCACCT  45 35
NFH28_RS24710 NONE
NFH28_RS24715 NONE
        nepI   68154 ..   68172 +    -3  -5.42259   TTATGCTCTGCGGTG             GCGGCAAA CCA TTCTCCGC             TTTTTTTCACCGTGC  84 113
NFH28_RS24725   69190 ..   69200 +  -6.8   -2.8294   CCTGCGCCAGTAGCT                 CGTC GAT GACG                 TGATTGTAGAAGCTC  55 153
NFH28_RS24740 NONE
NFH28_RS24745 NONE
        dagR NONE
NFH28_RS24750   73104 ..   73118 +  -2.1  -4.18018   GTGTCCTCATGTAAT              TGCGCC AGGA GGC-CA               TTTTGACTACCACAC  57 22
NFH28_RS00350 NONE
NFH28_RS24755 NONE
NFH28_RS00355 NONE
NFH28_RS00360 NONE
NFH28_RS00365 NONE
        dgaE NONE
NFH28_RS00375   77774 ..   77797 +  -8.8  -2.78049   CAGCCGTCAGTGATT          CCCTTTCGAG CCTC CTCGCAGGGG           TAAATTTTCCTGAAT  64 162
NFH28_RS00380 NONE
NFH28_RS24770   79124 ..   79134 +  -6.8  -3.62054   CAGGCTGCCGCTCAC                 CGCA AAG TGCG                 TTCCTTCTTTAGCGT  64 16
NFH28_RS00390 NONE
        estX NONE
NFH28_RS24795 NONE
        mgtA NONE
        mgtR NONE
        cigR NONE
NFH28_RS24805   85639 ..   85655 +  -9.5  -3.08015   TGTTGTTGCCTTTCA              CTGATAG TCA CTATCAG              TGTTAAAGTCATTAA  71 487
         qac NONE
NFH28_RS00415 NONE
NFH28_RS00420 NONE
NFH28_RS24825   87788 ..   87806 + -14.6  -3.27902   CGTTTCCGGGTAAAA             GCCGCTGA AGA TCAGCGGC             TCTGTTGTTACCTGA 100 73
NFH28_RS24850   92153 ..   92172 +  -6.4  -3.38581   CAGTCACTTCACAAA            TATCCGCC TCAG GGCAGATA             TCTTTAACCATTCAT  59 128
NFH28_RS24865 NONE
NFH28_RS00460 NONE
NFH28_RS24870   96872 ..   96906 +    -5  -3.39862   CCGGAGACGACGATC    TTC-CGCGCCTCGAT TGCTAC ATGGAGGCGCGCGCA     TTATAGCTACTTCCT  53 174
NFH28_RS00470 NONE
NFH28_RS24885 NONE
        floR NONE
        yicI NONE
NFH28_RS24895 NONE
NFH28_RS24900  102771 ..  102804 +  -5.8   -4.7657   ATGGTGAAAGAGCGT     TACAGCAGCGGCGA ATCGTG TCGCCGCCGCAGGG      TTTTTACGGTTTTTC  76 106
NFH28_RS24915 NONE
        gltS NONE
NFH28_RS00495  106517 ..  106546 +  -8.6  -2.64735   TAACGTTCGGTTTCC       GGCATCCAGCGCT CAATC AGCGCTTG-TGCC       TGCTGTGGATAACGT  63 56
NFH28_RS24930  108705 ..  108719 +   -10  -3.36273   ATAACCACCCTCAAA               CAGCAG GCG CTGCTG               TTCATCTTCCGGCAA  76 235
NFH28_RS24950  111758 ..  111769 +  -5.8  -3.08508   AATTTGCTGATTAAA                GCGT TATG ACGC                 TGCTTTTGGCGGCTC  52 31
NFH28_RS24955  112460 ..  112470 +  -3.2  -2.85019   TTTGCGCCAGATTAT                 TGCA TTT TGCG                 TCCCTTTTTCCGCTT  44 35
NFH28_RS24960 NONE
NFH28_RS24965 NONE
        ligB NONE
NFH28_RS24970  114897 ..  114910 +  -4.5  -2.75536   CAATTAAATAAAGAA               CGTGC AACA GCATG                ATTTCCCCCTAATTT  47 204
NFH28_RS24975 NONE
        sul1 NONE
NFH28_RS24985 NONE
NFH28_RS00540  117207 ..  117225 +  -2.4  -5.45652   GCATCATGAAGTCCA            GACGGCG ACCTAC CGCC-TC             TTTTTTCTTCAGAAT  85 215
         rph  118779 ..  118796 + -11.3  -5.96219   GAAAATTGATTTTAA             GGCGACT GAAA AGTCGCC              TTTTTTTTGTCCGTA 100 32
NFH28_RS25000 NONE
        pyrE NONE
NFH28_RS25005  120074 ..  120090 +  -7.9  -2.52896   TTTTGCCGTCGTGAT              GCGTTGG CTT CCATCGC              TGGATTCAAGCATCA  59 91
        radC  122784 ..  122797 +  -6.7   -4.2074   TAAGATTCTTTGCGC               GATCC ATCG GGATC                TTTGTCTGTTCGGGA  72 38
        rpmB NONE
        rpmG  123437 ..  123452 +  -8.2  -5.86976   TTGATGTAACAAAAA              CCTCGC TTCG GCGGGG               TTTTTTGTTTTCTGG 100 49
        mutM NONE
NFH28_RS25040 NONE
NFH28_RS25045  125942 ..  125972 +  -5.5  -3.53012   CCAGAGTTTCGCCCA      CCGAGACGGAATGCA GCA TG-ATTCCGCC-CGG      TTTCAACGGACGGCG  57 42
NFH28_RS25050 NONE
        rfaQ NONE
NFH28_RS00610 NONE
        rfaP  129513 ..  129531 +  -2.4  -3.91897   CTGTAATTATAATAA             TTATGCAC TCA GTGAGTAA             TTTATGAGTGAGACA  53 35
NFH28_RS00620  129806 ..  129818 +  -2.7  -4.23758   TTTAATATCTAAAGT                CTTTA GAT TAAGG                TTTTAACTCTGGGGT  58 63
NFH28_RS25065 NONE
        waaB NONE
NFH28_RS25070 NONE
NFH28_RS25075 NONE
        waaO NONE
NFH28_RS25080 NONE
        rfaJ NONE
NFH28_RS25085 NONE
        rfaY  133781 ..  133795 +  -2.9  -3.34369   TGAGATGTAATATTA               GTTAT TGAAT ATAAC               ATTTATTTATAGGTT  47 121
        waaZ NONE
NFH28_RS25100 NONE
NFH28_RS00650 NONE
NFH28_RS25105  137675 ..  137686 +  -3.6   -4.0162   GATGGCATAATCGCC                CTGC GACT GCGG                 TTTATCGTATCCCAG  58 94
         kbl NONE
         tdh  142825 ..  142845 +    -9   -5.4505   CGTTTCATCGTAAAA            GGTTGGTG TCATT CGCCAACC            TTTTTTGTTAGGGAA 100 281
NFH28_RS00685  144218 ..  144230 +  -3.3  -5.09426   AGCGCGTAGCGTAGA                CCGGT TGC AGCGG                TTTTTTCGGCTTGCA  76 146
NFH28_RS25155  144571 ..  144589 +  -2.4  -2.62263   GCCGCGCGCATCGCC             TGGCTATT GCC AATCGTCA             TGCTGTCGAGAAAAT  39 14
NFH28_RS25160  144914 ..  144924 +  -6.8   -4.2349   TGTTTGGCGGCAGCG                 CCAG AAC CTGG                 TTTTCCGTGTGCGGG  74 74
NFH28_RS25165  145293 ..  145307 +  -7.8  -3.61178   CGCCAGAATCACCCT               GCCGTC GGC GATGGC               TTTGACCTCGGTGCC  69 122
NFH28_RS00705  148555 ..  148573 +  -3.9  -3.13504   AATCTGCCTCTGGTG            CGCGGTAA GTGA TTACC-CG             TCGTTTTCATGACGC  48 14
        grxC NONE
        secB NONE
        gpsA  150458 ..  150487 + -10.1  -4.39426   AACTGTTTGCATAAA       CGACCCAACCCG CACAGAA CGGGTTGG-TCG       TTTTCTGCCCGTCTG  88 49
        cysE  151791 ..  151814 +    -3   -3.6502   AACAGGCAATTTCCG          CGCGACGGTA AGGC TATAGCCGCG           TTTGAGTAGCCAGTC  51 483
NFH28_RS25205 NONE
NFH28_RS25210 NONE
NFH28_RS25215 NONE
NFH28_RS00740 NONE
NFH28_RS25220  156348 ..  156360 +  -7.7  -2.84527   TCGCGGGCATCTTCT                GGATC GAG GATCC                CTTTGATCACCATTG  61 14
NFH28_RS25225 NONE
NFH28_RS25230 NONE
        terW  159021 ..  159048 + -10.6  -3.59979   CAGAATCGGGATCCC        CATCGCGCCA AAGGCGAC TGGCGCGGTG         TTTACAATCAGGCAC  83 27
NFH28_RS25240  160130 ..  160142 +  -3.3  -2.68071   TCGGTATAAGTGTTT                GCTTC TTC GACGC                TGCGTTTCAATTGCG  42 35
NFH28_RS25245  160759 ..  160789 +  -6.1   -2.5294   TTCACTGCCGACAGA      GAACTCACCGACAG AGTT CTG-CGGTGTGTCC       ATGTTGTAGGCGGTG  53 0
NFH28_RS25250  161479 ..  161493 +  -5.6  -2.76263   CGTGATATAGGTTTC               GCTGGT ATC GCCGGC               TAGTTGGCTAATAGA  50 82
NFH28_RS25255  162545 ..  162573 +  -8.7   -3.0375   TTCACCGCATCGGTG        CTGTCCGCGGCCA GGG TGCCCGCCGCCAG        ATTTGTGATCTTGCT  66 22
NFH28_RS25260 NONE
NFH28_RS25265 NONE
NFH28_RS00780  166686 ..  166696 +  -4.6  -3.34398   CCACAGCGTATTTCA                 CGGC ATA GTCG                 TCTTTGCGAAACACC  51 409
NFH28_RS25280  169218 ..  169238 +  -7.5  -3.02511   CGAAGGAGACCGCCA            TTGCCGCCA CGA TGGCAGCGA            TGTTAGCGAAGTAAG  57 365
NFH28_RS00800 NONE
        selA NONE
        selB  174663 ..  174689 +    -8  -5.69262   GTTGCTTTATAAAAA         GCACATCAGG AAATGAA CCAGATGTGC         TTTTTATTTTTCTGG 100 83
        aldB  177727 ..  177741 +  -4.2  -4.00526   ACAACGCCTGATGCT               GCGC ATCTGGG GCGC               TTTGCTTCTCGCCTT  60 274
NFH28_RS00830  180673 ..  180684 +  -2.2   -3.9941   GGTTGCAAACTGAAT                GC-CC GAT GGCGC                TTTGCTTATCGGGCC  54 68
        yiaJ NONE
NFH28_RS00890 NONE
NFH28_RS25405  191499 ..  191509 +    -4  -4.56775   GGCGCGTTCTATCTC                 TTCT GCC AGAA                 TTTTTACGCCCGCCT  69 70
NFH28_RS00905  196061 ..  196103 +  -7.1  -2.89881   GCCGCGCATATGTAA T-TC-TGTGTGCCGGATGGCG CTA CGCTATCCGGCTTACAAGGCA TCTGTAGGCTGGATA  59 26
        xylA  199033 ..  199060 +  -9.8  -2.78679   CCTGTAGTCGTGATT        AGCCCGGTAAGCG TAG CGCT-GCCGGGCG        CTTTCAGTAAAGGAA  69 74
        xylB  200546 ..  200571 + -12.7  -3.61922   TGTCATAAGTCAGAA         TGCCTTTCAGT TTTG GCTGAAAGGCA          TTTCCCGTAAATATT  95 33
NFH28_RS00925  201064 ..  201081 +  -9.9  -3.61609   TACAGTGATGATGAA             TGATGGC CGGA GCCATCA              TTGTCGTTTAGCTAA  77 23
NFH28_RS00935  202576 ..  202592 +  -5.1  -3.10597   CCTGGTGAGGTGTGA              TGCCG CGAAATC CGGCA              ATTTTCGCTAAACAA  51 49
        glyQ NONE
        glyS  205705 ..  205720 +  -6.8    -5.626   TTAAATAAACAAAAA              CCTGCT CTCG GGCAGG               TTTTTTTATAACATA 100 49
NFH28_RS00955 NONE
NFH28_RS00960 NONE
NFH28_RS25460 NONE
NFH28_RS00965 NONE
NFH28_RS25465 NONE
NFH28_RS25470 NONE
NFH28_RS25475  209332 ..  209350 +  -8.8  -3.53745   TTACTTAAGCGTGGG             TTCGCCTG TAT CAGGCGCA             TTAATTTAAGCTCTG  68 190
NFH28_RS00985  211054 ..  211083 +  -6.4   -3.9941   ATCGACCACCGGGCC       GCGTCCGGCATT AATAAA AATGGCGGACGA        TTTCATTCTGGCAAA  65 339
NFH28_RS01000  215254 ..  215278 +  -6.4  -2.74263   CTCAGCAGAGGAAAA          CGTTGCTGGA CATAT TCCAGAAGCG          CTTTGCCAATGCCGT  53 148
NFH28_RS01015  217141 ..  217159 +  -5.9  -6.23545   AACACCAGGCGTACA             GCGCACC CATTT GGTGCCC             TTTTTTTTATTTAGC 100 206
        lpfA  218033 ..  218055 + -13.5  -5.00616   TACAGACAATCATAA           TGGCAACGG AAATC CCGTTGCCA           TTTTTTCCAGCGGAG 100 56
        lpfB  218774 ..  218789 +  -3.2  -4.12599   GACATGTTGACACAG              CGCGTT AACT AACACG               TTTTAAAGGATTATT  58 14
        lpfC NONE
        lpfD NONE
        lpfE  222974 ..  222991 + -12.7  -4.49644   ACGAATAATCACTGA             GGGCCAG TTCG CTGGCCC              TTTTCCATTTTTAGT 100 33
        eptB NONE
NFH28_RS01050  225053 ..  225071 + -14.6  -5.76633   GACCAAATTCAGAAA             CCCTGCTC AAT GAGCAGGG             TTTTTTTGTATCTGA 100 36
NFH28_RS01055  225509 ..  225529 +  -4.7   -4.1196   GCCTGTAATAGCTGC           TGCGCGGC CTGGTA GCCG-GCA            TTTTCACCCTCGCTT  62 323
NFH28_RS01065 NONE
NFH28_RS25545 NONE
NFH28_RS25550 NONE
NFH28_RS01070 NONE
NFH28_RS25555 NONE
NFH28_RS25560 NONE
NFH28_RS01075  231071 ..  231094 +  -2.2  -3.86897   GTGTAGGCCGGATAA          GCGCAGCGCC ATCC GGCGTAATGC           TTTATCCGCGATGCA  53 67
        dppB NONE
NFH28_RS25570 NONE
        dppC NONE
        dppD NONE
NFH28_RS25575 NONE
NFH28_RS25580 NONE
        dppF NONE
NFH28_RS25585 NONE
NFH28_RS25590  235805 ..  235819 +  -6.4  -2.56185   ACACGGTCAGGTTCG               CGCTTA CGA TAGGCG               ATGTTCATTGGGTTT  53 85
NFH28_RS01110  237311 ..  237350 + -18.6  -3.73775   AATGGCAACATGCGC  CCGAACCAGGCCGCAGGG GAAA CCTTGCGGCCTTTTTCGG   TTTACTGCGGGTAAG 100 66
NFH28_RS25605  240910 ..  240920 +  -3.2  -4.63542   GATGCCCTGTAACTC                 TGCG CTT TGCA                 TTTTTACACATTATA  66 341
        bcsR  241228 ..  241241 +  -2.3  -2.58544   CACATTCATTAAGGA               AGCCA TGAA TGGCG                ATTCTGGGACTGCAG  39 18
        bcsQ  241966 ..  242008 +  -5.3  -2.57463   ATGCGGGCGACAAAA CGTCCGCCGGGAGCCTGCG ATGAG CGCCCTTTCCCGGTGGCTG CTTATCCCGCCGGTT  48 3
        bcsA NONE
        bcsB NONE
        bcsZ NONE
        bcsC  251609 ..  251622 +  -3.7  -2.91199   GGCCTGAGAAGCGCA               GCGCC ATCA GACGC                TATCATTAACCGTTA  46 77
        hmsP NONE
        dctA  255196 ..  255221 + -12.6  -3.37259   ATCTCGCCACTTATG         CCCGTAGTCC CTTCCA GGACTGCGGG          TGTTTGCGCATAATT  90 40
NFH28_RS01170  257093 ..  257106 +  -3.1  -4.32857   GAGTCGCCTGCGGCA               GTGGT GTCT ATCAC                TTTCTCTTTCGGCAG  62 230
        pdeH  258869 ..  258914 +  -2.5  -3.30658   TTCTGACCCTGTAAC GCCAGACTGTTCC-CGTAATAC GTG GTATTACGAGGCGCGGTCATCC TCCTTTTTCGTCTGG  46 27
NFH28_RS01185  261047 ..  261074 + -11.2  -3.02144   CAGTAACGTGAAACG        TAGCGCCGGATG ATGC CATCCGGCGCCC         TATTACAACGCCTGA  79 35
NFH28_RS01205  266274 ..  266294 +  -5.3  -3.72695   ATCGCGATACTTTTC            CAGCGACAG ACC CTGCCACTG            TTTAATAAACGCGAT  58 316
NFH28_RS01215  268403 ..  268427 +  -7.1  -2.79183   ACTGTTTTTAACCAG          TTATGGGCGAT TTC ATCGCCCAGCA          TATCGTCGCCATACC  52 213
NFH28_RS01225  270956 ..  270980 + -11.5  -6.02546   GAAGAGCAGGCTGAA          TCGGGATCC AGATCGC GGATCCCGA          TTTTTTTTGGTTTCC 100 59
        fraB NONE
        fraD NONE
NFH28_RS01240 NONE
        fraE  275468 ..  275503 + -13.3  -3.03441   GTATTAATCATGCAG    GCTTGTGCGCCCACC CTTGAA GATGGGCGCACAAGA     TATTAACGCATGGTC  86 34
NFH28_RS01260  279293 ..  279324 + -10.3  -3.01712   AACGCGCTGACGTTG      TCA-CCCGGCTTAT AAAAC GTAAGCCGGGATGA      TGTTAAAGGGGCGGC  73 31
        prlC  281507 ..  281529 +    -2  -3.18264   ATTACGGGATTAAAG           GCTGATTT TACGTGC AAATCTGC           TTAATGGATGAAACG  44 21
        rsmJ  282277 ..  282313 +    -3   -2.6924   CCTCTGACGGAGTAA   CGGATTGCCCGATGGAGC TAC GCTT-ATCGGGCC-TACG   ATTCTCAATTATTTG  41 26
        uspB  285424 ..  285454 + -11.9   -2.8585   TCGTTTCATCCTGAC      AGGCCGGATTAGCG ACAG CGCTA-TCCGGCCC       ATTTGGCTTAAATAA  80 127
NFH28_RS01295  288620 ..  288643 +  -5.8  -2.91395   TCCCGAATGGAAACC          CCCGCTGAGC GCAC GCCCGGCGGA           CTTTGTGACACGCAT  51 260
NFH28_RS01300 NONE
        rbbA NONE
NFH28_RS01310  293699 ..  293709 +  -8.2  -3.50555   GCCGGGCAAGCGAAG                 CGCC CCC GGCG                 TTAGTCTTCTTTCGG  67 104
NFH28_RS01330  297692 ..  297714 +  -8.3   -4.6391   GATGCCTGGCTTTCC           GCGGCGGCG CTTTC TGCCGACGC           TTTTGTATCGTTGTT  87 486
        tusA  299042 ..  299056 +  -7.1   -3.5511   AACGTCGTTGGCGAC               GCCTC CCGAC GAGGC               TGTTTCTGGATGCGG  60 122
NFH28_RS01365  304609 ..  304622 +  -3.7   -4.1196   CCCAGTTCGCCGGAA               CGGGC GGCA GACCG                TTTTCCACCTCGCTT  60 404
        ftsY NONE
        ftsE NONE
        ftsX  308471 ..  308487 +    -8  -3.68024   ATGGGCTTCCGTTCG              CAGGGA AAGAG TCCCTG              TTGTCTCTTCCCCGC  69 69
        rpoH  309549 ..  309570 + -10.9  -5.49579   CGAATTGCCAATGAA           CCCTCGAAT GTGA ATTCGGGGG            TTTTGTTTTTTGTAG 100 47
        livJ  311114 ..  311140 +  -8.7  -4.66535   TCTCCCGGCATGTAG        GCCGGATAAGCG TCAG CGCC-ATCCGGC         TTTCTTTTAGCGCTT  89 187
        livK  313084 ..  313102 + -13.1  -2.73159   AGATAAGTTATCCCA             CCGCCCG CACGC CGGGCGG             GTTTAAAAAGGTTAC  85 48
        livH NONE
        livM  315315 ..  315328 +  -3.1  -2.78867   GGCGAAAGGAGAGCA               GGCATG AGT CA-GCC               ATTATTAGCGGTTAA  43 19
        livG NONE
        livF  316865 ..  316878 +  -8.1  -5.65177   TAAAATTTTTCAAAA               GAGCC TGAT GGCTC                TTTTTTTGTACATGT 100 90
NFH28_RS01440 NONE
NFH28_RS01445  317662 ..  317688 +  -2.4  -5.04175   TCTCTGTCGCCTTAC         TATCTTTTTTTT GTA ATAAAAAAGTTA         TTTTTCTGTCATTCG  71 169
        ugpB NONE
        ugpA NONE
        ugpE NONE
NFH28_RS01465 NONE
        ugpQ  322728 ..  322754 +  -9.4  -2.82516   GGCTGATGGTTTTCA         GCGGGATGTC AGGCTGC GGCGTCCCGC         TGTCCTGCTGCAACA  69 58
         ggt  325006 ..  325026 + -16.9  -3.39028   GATTTTTAATTCCAG            GCCCGGTGT CAG ACACCGGGC            TATTTGCAGATTATG 100 39
NFH28_RS01510 NONE
NFH28_RS01515  332182 ..  332214 +  -4.8  -4.40993   TGTAACCTTTTGTAG     GCCGGAT-AAGACGC GAAA GCGTTGCCATCCGGC      TTTTCATCGTTTGTC  68 46
        gntR  333412 ..  333423 +  -3.6  -3.53444   TTTGCAACTTGTAGA                GTGG GGGC CCGC                 TTTGAGCACGACTAA  50 151
        gntK NONE
        gntU  335360 ..  335385 +  -6.2  -5.80364   TATCGACACCGTAAG        CCGGGTAAGGCG TAAT CGC-T-ACCCGG         TTTTTTTATTGAGGT 100 90
         asd  336923 ..  336938 +  -6.1  -5.48825   TTTGTGTTAAACCAG              GGGTG CATCGT CACCC               TTTTTTTGCGTAATA 100 123
        glgB NONE
        glgX NONE
        glgC NONE
        glgA NONE
        glgP  346560 ..  346577 + -14.1  -5.32882   TTTAACGCTTGAGAA             CGGGGCC AAAC GGCCCCG              TTTTTTATCGTGGTA 100 44
NFH28_RS01570  347489 ..  347505 + -10.8  -3.80461   AAATAAAAAGACATA              GCGGGC AAGAA GCCCGC              TTTCGTCATCGCTTA  85 40
NFH28_RS01590  352981 ..  353014 +  -5.9  -2.84103   GCCTGTAAATAAAAA     ACGGCAGCCGGAACT TTCA ACTTCTGTCTGCCGC      TATCGTGAATGTTTT  51 46
NFH28_RS01595 NONE
NFH28_RS01600  355199 ..  355209 +  -2.4  -4.63218   AAAAGGGCGGTATAA                 ACCG CCC CGGA                 TTTTATTACGACGCC  64 56
        glpE NONE
        glpG  358159 ..  358180 +  -5.9  -4.56597   AACGAACGTGAGGCG           TATC-CGGCC TGT GGTCGAGATA           TTTTTCCAGGCCGGG  72 30
NFH28_RS01620  359400 ..  359410 +  -8.2   -3.1855   GCGAAGCTCAGCCAG                 GCGC GGC GCGC                 TTCGGTATTAAAACG  62 419
NFH28_RS01630  362710 ..  362720 +  -6.8  -3.25072   CTCAACGGTAGAGCG                 GGTG ATT CACC                 TTAACTTGTCGTGCC  59 406
        rtcB NONE
        rtcA  365164 ..  365183 +  -2.8  -2.78934   GGCCCGGTTTGTATG            TGTGTCTC AGTT GAGCTACA             ATTTGAACTGTATAG  41 75
NFH28_RS01650 NONE
NFH28_RS01655  365828 ..  365841 +  -3.8  -4.18018   AACAAATTTACACAC               CAGG ACGTTG CCTG                TTTTGCCTCAAACCC  62 92
        malP NONE
        malQ  373627 ..  373658 + -20.4  -3.01924   GCCGCGAAGAAGAAA      TAATAAAGCCGGGG ATTT CCCCGGCTTTATTA       TGTTGAGAGCACGTA 100 23
        bioH  377841 ..  377870 +  -7.1  -2.90075   GGCGGATAAACGTAT       TGAAGCGCGC-GGC GTC GCCAGTGTGCATCA       TGTAATTAAACAAAC  53 300
        ompR  385843 ..  385890 +  -4.8  -3.18023   CCGGACGGTTCTAAA GCATGAG-GCGAATGCGCTTCTC ACC GCGAAGTTCATTTGCCCGCACGC TGTTGCTCATCGTCA  52 20
        envZ  387198 ..  387223 + -13.4  -3.28791   ACAAAAGAGGCATAA         GAAAGGGAGG TATTAC CCTCCCTTTC          TTCTCAACGCCGGAT  95 26
NFH28_RS01740  390998 ..  391009 +  -5.8  -3.30124   TTTTTGCCGGATGGC                GGCA TAAA TGCC                 TTATCCGGCCTACGG  56 43
        nudE  396230 ..  396243 +  -9.5  -5.14563   AAACACAATAAAAAA               GGCGC CGGA GCGCC                TTTTTTGATCAGAAC  93 99
NFH28_RS01775 NONE
NFH28_RS01780  400223 ..  400236 +  -3.7  -3.53419   TTAACGAGGAGCGCC               GCCCG TGAA CGCGC                TCTTTGATATCTGGT  52 5
NFH28_RS01785 NONE
NFH28_RS01790 NONE
        hofQ  402358 ..  402373 +  -7.6  -2.84878   GCTTTTCGTTGCTTA              CGCATT GATT AATGCG               CTTTGCCTTGCCGAA  59 139
        aroK NONE
        aroB  404393 ..  404413 +  -2.6  -5.15969   ACAAGAAAGGTCAAA            CTGATATT GCGTA GATGTCAG            TTTTTTAGCTTCAGG  73 43
        damX  405891 ..  405912 +  -6.6  -2.97613   AGGATGCTGTCGGAG           CTTTCTCC ACAGCC GGAGAAGG            TGTAATTAGTTAGTC  56 166
         dam NONE
         rpe NONE
         gph NONE
        trpS  409312 ..  409326 + -11.4  -5.76633   AGACCTGTAAAAAAA               CCGGGA AAA TCCCGG               TTTTTTTGTATCTGC 100 127
        tnpA  410378 ..  410398 + -12.5  -3.76167   AGGCGCATCTGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTAGTGTTA 100 106
        ppiA  424249 ..  424269 + -11.8  -4.46155   CATAAAACATGCCTG            CGCGGGTG CGAGC CGCCCGCG            TTTTCTCCCTGTCTC 100 36
NFH28_RS01880 NONE
NFH28_RS01885 NONE
        pabA  425731 ..  425743 +  -2.7  -3.61609   TGAGTGATTTTTTAT                TCATA TTT TGTGA                TTATAATTTCACTGG  50 55
NFH28_RS01895  427008 ..  427044 +  -9.3  -3.16437   GTGGTGGCCTGATGG    CGGATTGCCGGATAAGC GTA GCGCATCCGGCGGTCGG    TCTTAACCTTTTGTA  70 29
NFH28_RS01910  430585 ..  430610 +  -9.7  -2.72461   GTTTTTATCTCGTAG         GCCCGATAAGCG TAG CGCC-ATCGGGC         ATTTCACCGCGGTTA  69 83
NFH28_RS01930  433367 ..  433385 +    -3  -3.85698   TTCTGTTCCGGTGCT             GCTGACCG CAA CGGTAATC             TTTATACCGGGGCGA  54 57
        kefG NONE
        kefB NONE
NFH28_RS01955 NONE
        slyD  439308 ..  439322 +  -8.5  -5.58454   TCGGGCACAAAAAAA               GCGGG TTAAC CCCGC               TTTTTTTCGTCTCAA 100 187
        fkpA  440601 ..  440622 +   -13  -6.36459   AATAAAAACTGAGAG           CCGCCGCT TGTAAT AGCGGCGG            TTTTTTTTTATTCAG 100 36
NFH28_RS01975 NONE
        tusD  441970 ..  441982 +  -2.7  -2.53748   CGATCGGGTGGTGCA                GTTTT AAT GAAAC                GTATTGCATTTGTCT  40 19
        tusC NONE
        tusB  442683 ..  442705 + -10.6   -4.7268   CGCCCTAAAATTCGG           CGTCCTCATA TTG TGTGAGGGCG           TTTTATTACGTGTTT  95 81
        rpsL NONE
        rpsG  443719 ..  443742 +  -8.9  -4.21275   GTCATAGTCACCAGG          CGGGCG-CTT CAGGT AAGTCGCCCG          TTTTGGATAACTTAA  82 51
        fusA  445931 ..  445956 + -13.3  -2.78935   AAAAACCAAAATCCC         GTGCTCTCTCC TGAA GGGGAGAGCGC          TATAGTAAGGAATAT  85 52
         tuf  447190 ..  447205 + -11.8  -5.11063   GTTTTGAATTGAAGA              GGGCGC TTCG GCGCCC               TTTTTGTTGCCTGCT 100 55
         bfd  447538 ..  447548 +  -5.4  -5.78622   TTAAAGAGATCGCCT                 GAGT CAC ACTC                 TTTTTTTTGACATCC 100 24
         bfr  448091 ..  448113 +  -5.7  -2.52623   GGTTACCGATTAACC          GTCTGGAAAG AAAA CTTTCCA-AC           CTGTTATGAAACCCG  49 28
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  453911 ..  453936 + -12.7    -5.252   CGCATTCTCAACGAA         TAAACGGCTCA GCGA TGGGCCGTTTA          TTTTTTCTACCCATA 100 48
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR  456941 ..  456951 +  -3.2  -3.32963   ATGCTGCCCGTGAAG                 CTGG CCT TCAG                 TTCTAAGGTAGAGGT  48 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ  459613 ..  459642 + -12.3   -4.6645   TTTCTTGCAAAGTTG       GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC       TTTTGTATGTCTGTA 100 55
        rpsM NONE
        rpsK  460481 ..  460499 +  -4.4  -4.15508   CGTCCGCCGAAAAAA             CGTCGCGT ATA ACGCTTCG             TTTTCCAGGTTAGTT  64 14
        rpsD  461131 ..  461149 + -10.4  -3.14132   ACACCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TTAGTACCAAAGAGA  74 10
        rpoA NONE
        rplQ  462606 ..  462619 +  -9.5    -5.626   AGTAACGTAAAAAAA               CCCGC TTCG GCGGG                TTTTTTTATACCCTC 100 46
NFH28_RS02170 NONE
        zntR  463508 ..  463529 +  -5.8  -3.61244   GTTGATTTATTGAAC           CGGCG-GGG CTACA CTCGCGCCG           TTAATTTATACAATC  59 36
NFH28_RS02180  463821 ..  463855 +  -2.1  -5.09426   AATAACACTTCCTCT    TTAGAAGGCGCTGGCG GAGC TGCCGGC-TCTTCTGC     TTTTTTACGGTTGAG  74 22
        dprA NONE
         smg NONE
NFH28_RS02220 NONE
        tsaC NONE
        aroE NONE
NFH28_RS02235  472512 ..  472536 +  -4.1  -4.08767   GCAGGCCCGATCTCT          CAGCATCGCTC AAG GGGCGGATCTG          TTTTACCGGACTGCC  60 87
NFH28_RS02245  473228 ..  473242 +  -6.4  -3.12351   GGTTGAAGAGAAAAA               TCCTGA AAT TCAGGG               TTGACTCTGAAAGAG  56 7
NFH28_RS02250  475015 ..  475028 +  -2.3  -2.72471   AAGAACTGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 46
NFH28_RS02255  475191 ..  475226 +  -9.2  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
NFH28_RS02260  478417 ..  478428 +  -4.4  -2.78679   AGAACGTAAAAACGG                TCTG ATAA CAGA                 ATTTGCCTGGCGGCA  47 102
         rrf NONE
NFH28_RS02270 NONE
         rrf  478797 ..  478846 + -23.3  -4.09117   GGAACTGCCAGACAT CAAATAAAACAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTATCTG TTGTTTGTCGGTGAG 100 28
        envR  485562 ..  485579 +  -4.1  -3.63968   TCATTCTCTACCCCT             TCTGCCA CAAT TTGCAGA              TTTAACGCTTTCGCC  53 194
        csrD  500701 ..  500728 +  -5.6  -3.85698   GATTGCTGCTGATTT        TTTCAGCCCTGAG GGA CTCAG-GCCGAGA        TTTGTAACAAAGGAA  61 172
        mreB  501888 ..  501902 +  -2.8  -2.75064   ATGCACGGCGGCGAC               CTGTTC AGC GAAGAG               TAGTTGGATACGGGC  41 8
        mreC NONE
        mreD NONE
NFH28_RS02385 NONE
         rng NONE
        yhdP NONE
        tldD  511286 ..  511299 +  -5.3  -3.96999   TCACTACCTGCACTT               TAAGC GGCA GCTTA                TCTTTTTCGGTGTAC  63 240
        aaeX NONE
        aaeA NONE
        aaeB  515432 ..  515450 +  -8.1  -5.65177   GCTAACCCACAAGAA             CCGATGC CAAAA GCGTCGG             TTTTTTTATGACTAT 100 36
NFH28_RS02425  516083 ..  516099 +  -4.3  -3.06261   AAATGGTGCCCATCG              GTTGCAG ATT CTGCGCC              TGTTCCGCGTTGACC  47 243
         mdh  518762 ..  518781 + -12.8  -3.98913   CTGTTCCTGCCCGAT            GCCGGGGC TTTT GCTCCGGC             TTCTTTGACTGTAAA 100 42
NFH28_RS02450 NONE
NFH28_RS02455 NONE
NFH28_RS02460  521617 ..  521635 +  -4.5   -2.5474   ATCCTTTTCCCTTTT             CATCCGT AATTA ACGGAAG             CTGTTCTGACTAAGG  46 17
        ttdA  522536 ..  522549 +  -2.4  -2.98447   TTACACCATTACGTC               TCAC AGCGGA GTGA                ATTTCTGATGACTAA  41 4
        ttdB  523307 ..  523323 +  -3.6  -3.82519   TAGCCCCATTATCGT              GCCTCC TGCCT GAAGGC              TATTTTATGACTAAT  53 158
NFH28_RS02475 NONE
        oadA NONE
NFH28_RS02485 NONE
NFH28_RS02490  527452 ..  527474 +   -12   -4.4078   TGACTAGTCGTCGAA           CGACGCGG GCAAAAG CCGCGTCG           TTTTAGTTCGACGCC  95 34
        zapE  531900 ..  531912 +  -3.3  -3.39896   ACAAGCGCAGCGCTC                CGGCA TTA TGCGG                TATTATATCTGTGCA  48 46
        rplM NONE
        rpsI  533057 ..  533070 +  -9.5  -5.64274   CTGTTAGCGAAAAAA               CCCGC TTCG GCGGG                TTTTTTTATGGCTAA 100 64
NFH28_RS02525 NONE
        sspA NONE
        sspB  535382 ..  535399 + -12.7  -4.97158   TAGTAAAATAATCAA             CAGGCCC TGAA GGGCCTG              TTTTGTTTGGTCTCC 100 30
        nanR  536309 ..  536331 +  -4.8  -3.60925   CCCGGTTTAGTGAAG           CAGATCGC ACTATAA GCGTTCTG           TATTATTTGCTGCTT  57 57
        nanA NONE
        nanT  538917 ..  538939 + -16.4  -3.52113   GAAAAGTTAATCCGC           TTGCCCGGTT TTC AACCGGGCAA           TATTTGTAAGGGAGT 100 31
NFH28_RS02555 NONE
        nanK NONE
        nanQ  541457 ..  541473 +  -4.4  -3.61654   AGCATCTCTTTCACC             CG-CGTG ACGC CACGACG              TTTCGGGTAAGTGTC  55 499
NFH28_RS02595  552497 ..  552522 +  -8.3  -2.60813   TGGATACCACCTGTA         GCGTAGCGT GATGAGGG GCGCTACGC          ATATTTCGCACAATA  63 20
        arcB  554980 ..  554996 +  -2.1  -3.86266   CCAACACCAGGGAAA              TCGTGGC TGC GCCGTGC              TTATTATGATGATGT  53 73
        elbB NONE
        mtgA  556552 ..  556563 +  -7.2  -3.30124   ATTTTGTCGAATGGC                GGCG CGAA CGCC                 TTATCCGGCCTGCGA  63 40
        mlaF NONE
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB  568866 ..  568881 +    -9   -2.9911   CCGGCACTTTTACCG              CGCTGA TTTA TCAGCG               TAATCTTTTGCTTAT  68 117
        ibaG NONE
        murA  570546 ..  570574 + -13.9  -4.08692   CTTCTGTACGCTGAA        CAACCCCCGCG AACGCGA TGCGGGGGTTG        TTTTACAGGCACTTA 100 42
        rplU NONE
        rpmA  572952 ..  572972 +   -14  -4.75174   CGGTAACGGATGAAA            GCCCCGCA CCTGT TGCGGGGC            TTTTTACATTCGATG 100 54
NFH28_RS02730 NONE
        cgtA  575254 ..  575273 + -16.4  -4.94147   GCCTACAAAAGCCAA            CGGGCCGC ATTT GCGGCCCG             TTTTATTATGTTCTT 100 73
        greA  577544 ..  577558 + -12.8  -4.36914   TAAAGAAAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACGGAGA 100 74
        rlmE  578756 ..  578770 +  -2.8  -3.40899   TAGAGTATCCTGACG               CTGTTT TTA ACACAG               TTGTAATAAGAGGTT  46 84
        ftsH  580775 ..  580794 + -12.8  -5.86609   TAGCGCTCACCGAAA            CCCTGGGG CTTG CCCCGGGG             TTTTTCTTTTTTTAA 100 65
        folP NONE
        glmM  583125 ..  583139 +  -5.7  -4.00469   GCTTAAATTGCCCTT               GCGAA GGTCA TTCGC               TTTGGTTAGTATTCA  63 132
        secG NONE
NFH28_RS02780  583689 ..  583704 +    -9  -5.92337   ATATTCCGAAAGAAA              GACGCT GAAA AGCGTC               TTTTTTTTCGTCTGT 100 41
NFH28_RS02785  585122 ..  585137 + -11.8  -3.08679   GATATTCACAAAAAA              GGCCGC TTTC GCGGCC               TGTTGCATCAACGAC  81 74
NFH28_RS02795  587049 ..  587064 + -10.4  -5.60689   TTCAGTTATCTAAAG              CCCCGA TTTA TCGGGG               TTTTTTGTTATCTGA 100 152
        rimP NONE
        nusA NONE
        infB  591992 ..  592006 +  -9.2  -5.61913   CAAGAAATTTAAAAA               GGGGCT TAT GGCCCC               TTTTTTGTCTTTATT 100 202
        rbfA NONE
        truB  593431 ..  593445 +  -2.8  -3.95071   GTAGAATACCGCCGC               TTAACG TCG CGTAAA               TTATTTAACAGTTTA  54 75
        rpsO  593824 ..  593840 + -10.8  -5.00884   GAGTTTCAGAAAGAG              GGGGCC TTCAT GGCCCC              TTTTTTCCAGCAGAT 100 48
         pnp  596190 ..  596210 + -18.3  -3.57792   GTAAGGTAGCCTTTT            GCCCTCCGC AGT GCGGAGGGC            TTTAGACCTGGCTGG 100 37
        nlpI  597206 ..  597231 +  -7.5  -4.04023   CGTAATCTTTTTGAT         TGCCATCACCT TCGC GGGTGAGGGCG          TTGTTGTTCGTTAAT  72 59
        yrbN NONE
        deaD  599284 ..  599306 + -13.4  -6.11392   AAAGTAAAATATACA           GCCCCGATCG TCA CAATCGGGGC           TTTTTTTATTTCTTT 100 69
         mtr  600646 ..  600672 +  -8.7  -2.61144   ACCAGTAATTGAACG         AGCCGGATGAG CTGTT TTCATCCGGCA         ATATTTCACAAGTCC  63 33
NFH28_RS02860  602188 ..  602222 +  -8.4  -3.89215   ATTTCATCCGCCTGG     GTCTCCCGCAGGATGG ATT CCAGCCCGTGGCGGAC     TTTCGCTTTATCACC  71 106
NFH28_RS02880 NONE
NFH28_RS02885  606439 ..  606475 +  -5.9  -3.75169   CAAACGCTTCGCGTT   CCG-TCACAAGGCGCT CTTTCT GGCGCTTTGTGAGCTG    TTTGATGCGATACTC  60 74
NFH28_RS02895  607515 ..  607532 +  -3.3  -5.72207   AATAGCCTTATCAAT             GGTGACG CTGG CCTCGCC              TTTTTTTCCTTTCAC  89 365
NFH28_RS02905  608494 ..  608505 +  -7.2  -3.43338   CATTCTTATCGCCAC                CCGG CACA CCGG                 TTACTTAATATACGT  65 80
        rsmI  613392 ..  613402 +  -3.2  -3.89822   AACCTTCGTTAAACG                 TGGT AAT ACCG                 TTTGTCGCATCAATG  54 392
NFH28_RS02985 NONE
NFH28_RS02990  625141 ..  625158 +    -7  -4.08064   TCAAACATATGAAAA             CATGGC CCTTAA GCCATG              TTTTGCGAGGCGCTT  70 221
        garL NONE
        garR  628981 ..  629009 + -10.2  -2.64803   TCGCTAACGACGTTG        TGCCCGGATGGC GTGTA GCGATCCGGGCC        TGAATTTCAGACTGG  70 34
        garK NONE
        rnpB  630633 ..  630646 +  -9.5   -5.0925   CACTTCTTCATAAAA               CCCGC TTCG GCGGG                TTTTTGCTTTTACAG  93 36
        tdcA NONE
        tdcB NONE
        tdcC NONE
        tdcD NONE
        pflB  638992 ..  639031 +  -2.7  -3.08798   TTACTCAGGCGATGT  AACGTGAACGGGGCGATC GTGTG GATCGCCCCGCG-ACGGA  TCTTCGCTGAACGGT  43 24
        tdcG  640488 ..  640507 +   -15  -5.58179   CAGAAGTTGAGAAAA            GGGCGCAC CAAA GTGCGCCC             TTTTTTGTTGTGATA 100 86
NFH28_RS03050 NONE
NFH28_RS03055  643483 ..  643520 + -11.4  -3.57144   CGGGTCTACCCGTTA  TCA-GCCGGATCG-GGCG CTTG CGCCGCCATCCGGCATGA   TTTCAGGCTGCGGCC  87 98
        yhaJ  645417 ..  645427 +  -8.2  -3.53012   GCCGGAAAATAAATA                 GCGC GCG GCGC                 TTTAAAAGCGGCGCC  67 29
        rlmG  657466 ..  657477 +  -3.6  -4.27316   TACCTAACCCTTCGC                CCGG CTTG CTGG                 TTTTGCGTTGCAGCA  64 420
NFH28_RS03160  662697 ..  662737 + -12.7  -2.78384   GGTAGCAATGGTAAT G-ACATCCGCCCGGT-AGC AACAG GCTTACCGGGCGGATGCGC TCTGATAGAAGGCGG  82 52
NFH28_RS03165  664856 ..  664870 +  -7.8  -5.40072   GCCATTGCGCGCCGT               TCGCGG TAA TCGCGA               TTTTTTTCCGCCCGC 100 258
NFH28_RS03175  666300 ..  666317 + -11.3   -3.5275   GTCAGAAACAAAAAG             GCCACTC TTTA GAGTGGC              TTAATTATATGATTT  85 59
NFH28_RS03200  670849 ..  670865 +  -2.2  -3.21595   TAAGCGAGTGTGATG              TTTCGC TTAAC GCGTAA              TTCATCCTACGGATT  44 9
NFH28_RS03205  671381 ..  671391 +  -2.4  -2.62184   TCTGGTCACGACGAA                 TGCC ACT GGCC                 TGATGTGAGGGAACA  39 7
NFH28_RS03210 NONE
NFH28_RS03215 NONE
NFH28_RS03220  672467 ..  672495 +  -3.1  -4.19746   ATTAACAACCTGAAT        TTTTTGGCCAC GGTTCAA GTGGCCGGGGA        TTCTTTTGCCCTAAG  60 40
NFH28_RS03225 NONE
NFH28_RS03230 NONE
NFH28_RS03235  675634 ..  675683 + -11.1  -2.56164   ATGACGTTGTAACTC TGTGAAACATATCTATTTGTC-AC CTG GTAGACAGAAAAATATGTTTCACA ATTAGTGCTTAAAGG  74 37
NFH28_RS03240  676097 ..  676129 +  -7.7  -3.67622   ACATCTGAACAGGCG      CAGTAAATATCGGCA ATC TGCCGGTGTTTCCGG      TTCGTTTTACGAATA  65 174
NFH28_RS03260  680018 ..  680036 +    -6  -2.81888   AATTTCAGAGAAAGC             CGGGAAGT TTA ATTTCCTG             TAATTCACTTTAGCG  53 4
NFH28_RS03265 NONE
         gpM  681904 ..  681921 +  -2.6  -4.36903   GTGGAAACCGGTCAG             TCCGCC TTTTTC GGGGGA              TTTATGTTTAGTGGA  60 101
NFH28_RS03275 NONE
NFH28_RS03280 NONE
NFH28_RS03285 NONE
NFH28_RS03290 NONE
NFH28_RS03295 NONE
NFH28_RS03300 NONE
NFH28_RS03305 NONE
NFH28_RS03310 NONE
NFH28_RS03315 NONE
NFH28_RS03320  686683 ..  686710 +  -6.3  -3.53012   GGAATATACAGGAAT        TGCTGTGGCCA ATGGTG TGGCTAAAGCA         TTTAAAGGCACAGAA  60 171
NFH28_RS03325 NONE
NFH28_RS03330 NONE
NFH28_RS03335 NONE
NFH28_RS03340 NONE
NFH28_RS03345 NONE
NFH28_RS03350  693578 ..  693605 +  -4.8  -4.16251   TGACTGGCCGGAGGT        GCCGGATGTG GCGTGAAG CGCGTCTGGC         TTTTACGGATTCTCT  65 10
NFH28_RS03355 NONE
NFH28_RS03360  694804 ..  694814 +  -3.2  -2.86944   CAGGGTGCTGAAGCC                 CGTC AAT GATG                 CTTTAGGTTAATGAT  44 4
NFH28_RS03365  696540 ..  696558 +  -9.5  -5.25803   CTGAACATCCCATCA             GCCCGCG CATAA TGCGGGC             TTTTTTGTGCCCATT 100 37
NFH28_RS03370  698276 ..  698293 + -11.3   -3.5275   GATAATATCAAAAAA             GCCACTC TATA GAGTGGC              TTAATTATATGATTT  85 102
         mug  699116 ..  699133 + -14.1  -3.95073   GGCCTGATAAAAAAA             CGCCGCC TTGC GGCGGCG              TTTATACGTGTGCGG 100 112
        tsaD  704790 ..  704816 +  -5.8  -3.01712   CCGGTCAACCCTTGT        GGGCCG-ATCC CCAGAC GGTTGCGGCCC         TCTTCCAGACGCAGC  52 228
        folB  705959 ..  705977 +  -3.1  -3.40051   AAACGGTTATATATG             GGGTCTT AACGC GAGATCC             ATTTTTGCAGTGTTT  48 69
        bacA  706906 ..  706937 + -11.6  -3.64822   GTCTGATAAGCGCAG      CGCCATCAGGCA ATTTATCG TGCCGGATGGCG       TTTAGCTGGCGGGGT  87 97
NFH28_RS03440  710482 ..  710494 +  -6.2  -2.94708   CGGATCAGGCGAAAC                GCCG CCACC CGGC                ATTATTTAAAGGATA  55 107
        glnE  713344 ..  713356 +  -5.5  -3.82484   GCAAGCTGGCGGAAG                TGGCT GGT AGCCG                TTTGAATTATGCTAT  61 8
        hldE  714923 ..  714936 +  -2.3  -5.76949   TTCGACGCGTATCTC               GCGGT TGAC GCTGC                TTTTTTTTCGACCTA  91 106
        glgS  718130 ..  718157 +  -9.8  -4.93316   ATTATTCAGATCTTA        TATGAGCGGGCC GTCA GGCCCGTTCACG         TTTTTACTCTTGTTG  93 68
        ribB  719575 ..  719594 + -12.2  -5.50925   TCATGGTTGAAAAAA            GCCGATGA GATG TCATCGGC             TTTTTTGTATTCCTT 100 50
        ygiD  725668 ..  725686 +  -2.4  -4.08064   AACAGCGGCAACAAC             GCTTTATT GGA GATAATGC             TTTTCCAGGCCGGTT  56 448
        nudF NONE
NFH28_RS03530 NONE
        cpdA NONE
        yqiA NONE
        parE  733434 ..  733453 +  -8.6   -3.0636   TCTCGCGGATCTCGA            CGTGTAAC GGTT GTTGCACG             CTTTATCTGGTCTGC  66 19
NFH28_RS03570 NONE
NFH28_RS03575  738097 ..  738135 + -14.7  -3.31726   GTTAACTTCCTCGCC   ACCTGTCTCACGGTTTG TGACT CAGACCGTGAGATAGGG   TATTATCTGCGGCAA 100 36
        parC  740510 ..  740553 + -13.3  -3.61103   CCATCCGGCGCTCTG CCGT-TGCCGGATGACGACGC AGTA GCGTC-TTATCCGGCCTACGG TTTCAGATCGGATTA 100 80
        plsC  741485 ..  741505 +  -3.9  -4.18762   TAGAAATCATTTTTT            CAGGCACAA CTC TTTAGCCTG            TTTTACATGGAGCTT  62 61
        ftsP  742941 ..  742976 +  -5.4  -4.07568   AGCGTCGTAAAGCGT    CCGAGTACGGGTCTG AATAGCG CAGACCCGT-CAGGG    TTTTCAGGAAGGAGC  65 31
NFH28_RS03610  748665 ..  748676 +    -3  -3.98981   CCAGAGGAGGGGATA                TCAT GGGT ATGA                 TTATTATTCCCTGTT  54 226
NFH28_RS03615  749035 ..  749054 +   -15  -4.77036   TATGCCTCACGAATT            CTGGCCGC CAGC GCGGCCAG             TTTTTCATCATCAGC 100 199
NFH28_RS03640  754397 ..  754411 +  -5.6  -2.61912   CAACGAAGCGTAACC               GGGCCA TCC TGGCCG               ATTATGGATACGTCA  50 62
        exbB NONE
        exbD  757849 ..  757876 +  -9.9   -5.4833   CTGCTGACGCTGTAG       GCCGGGTAAGGCG AAGT CGCC--ACCCGGC        TTTTTTATTGCCTAA 100 46
NFH28_RS03680  760362 ..  760377 +  -3.2  -4.43911   ATGAGATTTAGAGCC              TATCCC ATTA GGGCTA               TTTTACTTGCCATTT  62 30
NFH28_RS03685  761392 ..  761407 +  -7.6  -2.81055   CGATAACGAGAGTGC              GTCATC GTCT GATGAC               TAATCTCTTATATTC  58 286
NFH28_RS03690 NONE
NFH28_RS03695 NONE
        hybO NONE
        hybA NONE
        hybB NONE
        hybC NONE
NFH28_RS03720 NONE
        hybE NONE
        hypA NONE
        hybG  770237 ..  770262 +  -6.3  -3.28712   TATATCGCTCTATAA         TCGTTATATAA TTAT TTATATATCGA          TTATGGGGCGAAACC  59 59
NFH28_RS03740 NONE
NFH28_RS03745  772069 ..  772101 +  -4.8  -3.63283   CAGCAGGGAATACCA      TGCCGGATGACG ACATTACTA CCCCATCCGGCA      TTATGGTTTAACTTT  57 53
         gss  775071 ..  775107 + -13.8  -3.81488   TAACGGGGTCATTCT   C-GTCGGGATATCGGCG TGGG TGCCGATATCCCGCCTG    TTGTGTTTACCAGCG 100 38
NFH28_RS03760  776915 ..  776948 + -16.9  -3.18582   TGGCTGTGTTTGTTT     ACCCGAATCACTTAC CTTA GTAAGTGATTCGGGA      TTAATCAGTAACCTC 100 154
NFH28_RS03780  783037 ..  783056 +   -15  -3.25539   GCTACCGGGTTCTAA            CGGCCACC TTCG GGTGGCCG             TCTTCATTACCCTTA  95 76
NFH28_RS03785 NONE
NFH28_RS03790  785396 ..  785407 +    -3  -5.46698   GAATAGTTTGTTTTT                TGAT TTAA ATCA                 TTTTTTAGTTTTCAC  79 199
NFH28_RS03795 NONE
        iraD  786829 ..  786842 +  -5.2  -3.69354   TAATGCAGGAAGGAA               CGCC GGGCCG GGCG                TTTAACATTATCCCA  57 41
NFH28_RS03810 NONE
NFH28_RS03815  790279 ..  790289 +  -3.2  -4.09805   TGAAAGCCATAAGCA                 GGGT TGA ATCC                 TTTAATTGTTCGTCA  57 19
NFH28_RS03820 NONE
NFH28_RS03825  792666 ..  792682 +  -6.6  -3.09234   TGTACCGAAGACATT              CTGGTT CGGGA AACCAG              TTCCGTGCGATTTAT  54 163
NFH28_RS03835 NONE
NFH28_RS03840  797212 ..  797225 +  -3.8  -3.85698   AATCTGTTTACACGC               CGCA GCAGGA TGCG                TTTCTGCCAGCACAA  56 418
        ripC  798663 ..  798678 +  -5.4   -3.3761   GATTACTCGCCCGGG              CAGGGA TCTT TTCCTG               ATTTTATTAACAGAG  56 9
        ripB NONE
        ripA NONE
NFH28_RS03865  801217 ..  801233 + -10.9  -2.62616   TCGAACCAAGGACAC              GGGGATT TTC AATCCCC              TGCTCTACCGACTGA  66 217
NFH28_RS03880  804816 ..  804826 +  -4.6  -4.24948   ACACGGTCTGCCAGT                 CGGT AAT GCCG                 TTTTGAGTGTAATAC  66 209
        trmB NONE
NFH28_RS03910  809928 ..  809949 +  -9.3  -3.11024   GGGACTAATAAGTAC           AGGGTCGGC AAAT GCCGGCCCG            CTTTGTCTTGAGGGA  68 33
NFH28_RS03915  810709 ..  810729 + -15.5  -5.35365   TCCTTTTTAAACAAT            GGCGCAGAT CGT ATCTGCGCC            TTTTTATTCTGTTTT 100 45
        ansB  811932 ..  811953 + -15.1  -3.24232   AGTATTAAAGATAAT           GCCCCGGTC GGAA GGCCGGGGC            TATCTTTGGAAGACC  95 33
NFH28_RS03925  813100 ..  813151 + -12.5   -3.9461   TAACCGCCACAGGTC GG-TAAG-C-GTCGCGCCATCAGGTA TTT TACCCGCTGGCGCGACAGGCTTATCC TTGTTATTCCGCGAG 100 61
NFH28_RS03955  817542 ..  817558 +  -2.1  -3.08812   TGTATCCTGGCGAAC              CGGCGTT AAA ATCGCAG              CTTTGTTAAAACCAC  42 108
NFH28_RS03960  818552 ..  818590 +  -9.5  -3.53761   AGTGCCATCCATATT   GAGCGGTAGCCCGACAA TAATT TCGTCCGGCTGCCACTC   TTTCAGCAAACGTTC  71 300
NFH28_RS04005  826287 ..  826304 +  -6.3  -4.52703   GACTGAACAAGGGCG             CTCTTGT TAAC GCAAGAG              TTTTCTCGTGGTTTC  76 244
        yqgB NONE
        speA  828499 ..  828526 + -15.8  -4.94487   GAGTATTCCACTTGT        GGGTCGATTTAA TTAT TTAAATCGACCC         TTTTATATTTTATAA 100 45
NFH28_RS04020  829433 ..  829444 +  -2.2  -2.52464   GGAAGGACTGTGTGA                CGCGC ATA GC-CG                TAGGTTGCGGGAAAG  39 104
NFH28_RS04025 NONE
NFH28_RS04035 NONE
NFH28_RS04040 NONE
NFH28_RS04045 NONE
NFH28_RS04050  835695 ..  835727 +   -10  -4.79756   TTTTCTGACTTCAGA     GCCTTTTCGCG-TTG GGGT TAATCGCGGAAAGGC      TTTTTACGTTCTGTA  91 137
NFH28_RS04055  836892 ..  836924 + -12.7  -5.80817   GTAAACAAATTCAAA      CCCTTCCTCGTCG GGCCTAA CGACGCGGGAGGG      TTTTTTTATATTGAC 100 164
        speB  838180 ..  838203 +  -4.6  -4.57073   TTCGGACTCCTGACG          CTGAGAGAACT GCG AGTTCAC-CAG          TTTTTCGCCAAGATC  71 327
         tkt  841024 ..  841043 +   -15  -5.56673   TAATACGGCATAAAA            CGGGTCGC TTCG GCGACCCG             TTTTTTATTCTCCCT 100 45
         epd NONE
         pgk  846712 ..  846731 +   -15   -3.6053   AAGAAGTAATCGTTA            CGGGCAGG GATT CCTGCCCG             TTGATTTATCGCCGA 100 32
        fbaA  847906 ..  847925 + -12.2  -5.73339   GTCTGCTGATTGAAA            TGGCTTCC CTTG GGAAGCCA             TTTTTTTATCGTTAT 100 45
NFH28_RS04115  849037 ..  849059 +  -8.5  -3.73904   TCTCTGGTTATTGAG          CGGATAAGCG TAGC CGCT-ATCCG           TTATTCAGTCTCTTT  75 89
        argO  849802 ..  849814 +  -3.4  -2.78384   TATGCACGAGCTTTT                CAAC TAAGC GTTG                TCTGATGGACAACAG  43 19
NFH28_RS04125  850654 ..  850679 + -12.5  -4.39828   CACGCAGTAATCTCA         CCCGGCCTGGG CGCT TCCAGGCCGCG          TTTTCTCCCGGTGTT 100 31
        rpiA  852673 ..  852686 +  -2.4  -2.92924   GTCAGGGCAAATTTG               GTGA CATGTA TCAC                GTTTAATCGTTTGCC  41 78
        serA  854130 ..  854151 + -11.6   -3.0955   CTAATTTCCGCTAAA           TGGGCAGG AGATGA CCTGCCCA            TCCTTTCTCTGGTTT  79 37
NFH28_RS04160 NONE
        pepP NONE
        ubiH  859000 ..  859011 +  -7.2  -3.30124   GTAAAAATACCGGAT                GGCG GCTT CGCC                 TTATCCGGCCTACGG  63 93
        ubiI  860306 ..  860332 +  -5.8   -3.8901   AACCCGTCACACTTT        GCTTTCCCGGC TATCGC GCCGGG-GGGC         TTTCCTCGTTTGAAA  63 71
        gcvT  861786 ..  861806 +  -8.9  -2.84946   AAACCTGTTTTTGTG            CGTAACGGC AAA GCCGTCGCG            TGATTCATCCTTTTT  67 2
        gcvH  862271 ..  862286 +  -5.4  -3.41359   GCCTACTCACTGCAA              CGCGAA TGAT TTTGCG               TATTCGTTTTCGCAC  56 72
        gcvP  865286 ..  865299 +  -9.5  -4.24123   CGACTGTCTTCTAAA               GGCGC TTCG GCGCC                TTTTCAGCTTGTTAA  84 51
NFH28_RS04195  866921 ..  866932 +  -4.4  -3.94823   TCGGTAGTCGTCGTT                GATG CTGC CATC                 TTCTTCTACTTTGTC  60 337
        yqfB  868696 ..  868706 +  -5.4  -3.86897   AGAGGCGCAGTTCAT                 CGTT ATG AACG                 TTTCTCCGGAGTAAG  63 161
NFH28_RS04210  869443 ..  869485 +  -9.9  -4.16279   CGGCCTACGAGAACA GCACGTGCGAGCCTGATGGCG TTG CGCTATCAGGCTATC-CG-GC TTTTAACGTGATATC  84 85
        sdhE NONE
NFH28_RS04225  871452 ..  871473 +  -2.2  -4.15044   AGGTTTCAGGCGTAG           TGTTCGGC CATTTC GCCGAGAA            TTTGTTCACACCAGG  55 88
        xerD NONE
        dsbC NONE
        recJ  875485 ..  875510 +  -9.1  -3.30903   TTCGCTGTAATTAAG         GGGCGAAAT CCGCTAAT ATTTCGCCC          TTATAACCGCATTTT  71 62
        prfB NONE
        lysS  878188 ..  878218 + -17.7  -3.18366   AAATAAGATGTAAAT      TGCCGGATGG-GGC ATCA GCCGCCATCCGGCA       TCTCTTCGTTCAGGC 100 35
        actS NONE
NFH28_RS04270  880272 ..  880299 +  -4.1  -5.12617   GTCCAGCCCGTCAAG        CGGGGAGTAGA CACCGA TATAATCCCCG         TTTTTTAGGTGGTTC  77 321
        vapB NONE
        vapC  882451 ..  882471 + -11.9  -5.99154   TTCTGACATGTTTAC            GAAGGGAGT ACC GCTCCCTTC            TTTTTTTGTTTCCTG 100 235
NFH28_RS04295 NONE
NFH28_RS04300  884753 ..  884769 +  -5.1   -5.4593   TTACGATCATAATCA              TCGATCG TAT CGATCTA              TTTTTATTGTTTTAA  87 516
NFH28_RS04305  885595 ..  885620 +  -4.7  -4.61868   TAACGACAGGGAGAA         GCCGTCC ACGGAGGGGATC GGACGGC          TTTTATATCTGACTG  71 55
        stdB NONE
        stdC NONE
NFH28_RS04320 NONE
NFH28_RS04325 NONE
NFH28_RS04330  891533 ..  891550 +  -4.9  -2.93747   GAGTAAAATACAGAA             TTCAGGCG GGA CGC-TGAA             TGTATGGCCTTTCAT  50 126
        rcnR  892897 ..  892920 + -12.5  -3.88396   GATTCTTATATAAAA          TAGCCGGGA GTTATA TCCCGGCTA           TCTTTTACTTTAGCC 100 23
NFH28_RS04355  895758 ..  895771 +  -2.4  -5.41143   AGCGTCATTTCCTTT               GTGA TAAAAC TCAC                TTTTTTTAAACAATC  77 60
NFH28_RS04360  897398 ..  897414 +  -8.1  -4.42788   ATGCCGTTAAATAAA              TCAAAAC AGT GTTTTGA              TTTTGTGCCATTGCG  79 399
        kduI NONE
        kduD  899170 ..  899187 +    -7  -5.69473   AAAAAACTGATAAAG             CCCTGT CCTCGT ACAGGG              TTTTTTTATGATCTC 100 87
        araE NONE
NFH28_RS04380  902122 ..  902132 +  -4.6  -3.71848   ATTCAGCGTTAGTAA                 CTCG GTA CGGG                 TTGTTCCTGCCGGGG  55 447
        lysA  904236 ..  904271 +  -9.7  -2.86164   GTGGGATGCGTAATC   CGGC-CTG-GCGCAGCG CTTT TGCCGCGCCCAGCGCCG    TGTCATCATTACAGG  65 274
         aas NONE
        lplT  910367 ..  910382 +  -4.6  -3.55622   GGCTGAACAAGGTAT              TCCGCG CGCC TGCGGG               TTTGGCCCCGTTCAG  52 387
        rppH NONE
        ptsP  916915 ..  916939 +  -9.2  -3.37354   TTATTCGCACCTTTG          GAGCGTCTGC AACGC GCAGGCGCGC          TTATCAATCGCTATC  71 167
         lgt NONE
        thyA  918687 ..  918706 +  -7.1  -5.81032   ACGATCCTGCCATAA            CCGACGT CATCGC GCGTCGG             TTTTTTTTACCCTTC 100 47
NFH28_RS04455  919304 ..  919331 +    -4  -3.37796   GCGAGCGTAACGAGG        CCGCCACGTG TCAATAAC CACGCGGGGG         TTCTCGCTACTGGAG  50 9
NFH28_RS04460 NONE
NFH28_RS04465 NONE
NFH28_RS04470 NONE
        recC NONE
        ptrA NONE
        recB NONE
        recD  932428 ..  932440 +  -9.1  -3.30124   TTCTCGCCGGATGGC                GACGC GTA GCGTC                TTATCCGGCCTCCAA  71 47
        amiC  935412 ..  935425 +  -8.1  -3.41636   ACAGATACAAAAAAA               CACCC GTAA GGGTG                TTCATTAAGTTGGTT  65 111
        mltA  936994 ..  937012 + -10.3  -5.88565   AAAATAGTGAGCAGG             GGTGAGG AATAA CCTCACC             TTTTTTTATTCTGAG 100 96
        tcdA  938271 ..  938293 +  -2.9   -2.9348   ATAATGTTTCAATCG          TTATCGATGT CATC ACATC-ATAA           TGTATAAACTTTCGC  42 457
NFH28_RS04540  941168 ..  941187 + -10.7  -2.57423   GTTATACAAAAAAAA            GCACCGC AATATG GCGGTGC             TACATTAATCACTAT  74 47
        gcvA NONE
NFH28_RS04550 NONE
        rlmM  943922 ..  943966 + -16.6  -3.34962   ACGAGCGATAAAAAC GCGTTGCCGTCGTCCGGCGC GTCATCA GCGCCGGATGAC-GCA-CGC TTATCCGGTCTACGA 100 30
        fucA NONE
        fucO  952346 ..  952358 +  -4.9  -3.95073   CAATATCGCGGCAAA                GAAAT GCC ATTTC                TTTATGCGTCTCAAG  60 194
         syd  959546 ..  959557 +    -3  -2.95093   AATGTTTTTGCGCAC                TTTC ATAT GAAA                 ATTTACTTAAGGTAT  42 157
NFH28_RS04625 NONE
        truC NONE
NFH28_RS04635  961920 ..  961932 +  -3.3  -5.01535   TGTTGCACGGTGAGT                GTGTG TGG CGCGC                TTTTTATACTTCTCC  76 340
        gudP  963423 ..  963434 +  -4.4  -2.64099   TATTGAACTGAAACC                TGTC GCAG GACA                 ATTATCATGACAACG  46 4
NFH28_RS04650 NONE
        gudD  966147 ..  966172 + -15.5  -3.54436   TGGTGCGTTAAGTCA         GAGCCGGTTCC GTAA GGAACCGGTTC          TTCTCTGGGTGTATG 100 30
NFH28_RS04660  967771 ..  967807 +    -5  -3.85698   TAAATTCAGCTGGTT   CC-GGCGCCATCAGGCGC GCT GCTAC-GTTGGCGCCAGG   TTTATAGCGCAGCAA  61 434
        rlmD  971522 ..  971548 + -10.9  -2.52464   CGCATGTAATGATTA        CC-GGCTTACCG ACTT CGGTAGGCCTGG         TCCCTTAAGGAGAGG  74 32
        relA  973858 ..  973887 +    -3  -4.63184   GCAAAGCCGCATTAG       CA-ACCCCATA AGCATGAGA TATGGGGTATG       TTTTTGACGTACATT  65 82
NFH28_RS04680 NONE
NFH28_RS04685  974770 ..  974783 +  -2.5  -3.60597   GGTAAAAATAGGTCA               TAATA AAAA TATTA                TATTTCTACATTTCT  50 292
        mazG  976146 ..  976156 +  -4.6  -2.88788   CGTCAAAAACATTTA                 CCTC AAA GGGG                 CTATTTTCTCCCTCC  48 100
        pyrG  977951 ..  977974 + -13.9  -4.08164   AAAAAGTTAGAACGG          CGGTGCACC CTCAGC GGTGCACCG           TTTGTCTGAAGTTTT 100 40
         eno  979345 ..  979358 +  -9.5  -5.77988   CTCTTAACGTATAAA               CCCGC TTCG GCGGG                TTTTTTTGTATCTGT 100 53
        queE  980320 ..  980333 +  -3.8  -4.06533   TTTTTGCATCAAAAT               CAGC AAATTA GCTG                TTCTTTAATAATTTA  59 221
NFH28_RS04715  982865 ..  982880 +  -5.4  -3.36492   CATAAACGAGTGTCC              GTGCAGG CGG CC-GCAC              TTATGCCCTTCAGGC  53 386
        cysJ NONE
        cysI  986897 ..  986908 +  -3.6  -2.99471   GGGAATAACCTGAAT                TGCC GGAT GGCG                 TCTGTGTAGGCCTGA  45 33
        cysH  987741 ..  987757 +  -9.4  -4.32804   TGCTGCTATGAAAAA              TCCGGC AGGCA GCCGGA              TTTTAAATTGGTTAT  86 67
        casB NONE
       cas7e NONE
       cas5e NONE
       cas6e NONE
       cas1e NONE
       cas2e  997678 ..  997690 +  -4.1  -4.41114   TAAGGAATTGTTATC                TTACC GTT GGTAG                TTTGTTATGTAGTAA  64 60
        cysD NONE
        cysN NONE
        cysC 1003972 .. 1003989 +  -9.8  -2.79831   GATCCTGAGACACCA             CCGGGC TTGTAT GCCCGG              TATGGTCAAGGTTAC  69 33
NFH28_RS04805 1004423 .. 1004449 + -13.8  -2.57344   CGGGTATACGTAACA         TCCGGCAAATGT GGT ACATTTGCCGGC         GTTGTCGCGGCAATC  86 110
        ftsB NONE
        ispD NONE
        ispF NONE
        truD NONE
        surE NONE
NFH28_RS04835 1008547 .. 1008570 +  -6.8  -3.21912   TGGGTTAAGCGTATC          GTGAACAC ATTTTCCC GTGTTCAC           TTAATGCGTTGCACG  59 116
        nlpD 1009813 .. 1009825 +  -3.3  -3.35996   CGTCAAGGGATCACG                GGTAG GAG CCACC                TTATGAGTCAGAATA  48 73
        rpoS 1010827 .. 1010870 + -14.8  -4.27117   CGCGAGTAAGTACCC TTGTCAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTTACCG TTTGTCTTCTGCCAG 100 32
NFH28_RS04870 1013708 .. 1013721 +  -9.5   -3.2661   AAGATGATGACGTAA               GCGGC TTGC GCCGC                TTCGCTATTGTTTGG  72 26
NFH28_RS04880 1015588 .. 1015601 +  -2.3  -2.74999   CTCTGCCTGGCGTCA               CGCCT GAGG AGCCG                TCATGTTAAAAATTG  40 3
NFH28_RS04885 NONE
NFH28_RS04890 NONE
NFH28_RS04895 NONE
NFH28_RS04900 NONE
NFH28_RS04905 1021050 .. 1021070 +  -3.9  -4.04174   CAGCGAGCGCGCGCT            GTCGACAGA AAT TTTGCCGGC            TTTGCTTATCTCCAG  58 310
NFH28_RS04915 NONE
NFH28_RS04920 1023427 .. 1023466 + -21.6   -3.5394   AAAAGCCTGTTCCGG  CGCG-CAGACCCGATAGCG CGG CGCTATCGGGTCTGACACG  TTTACACCAGACTTT 100 40
NFH28_RS04930 1026724 .. 1026736 +  -2.6  -4.03885   CGAGTAACTACCTGC                GTCG GATTA CGGC                TTCGTTTTTTTGGCC  56 34
NFH28_RS04960 1030304 .. 1030319 +  -6.2  -3.63569   CCAGCTTTCGCTGAT              TCAGAA AACA TTCTGA               TTGTTAAAGGCTTAC  60 332
        invF NONE
        invG NONE
        invE NONE
        invA NONE
        spaK 1038339 .. 1038354 +  -3.2  -2.85078   TAGTCGGTCGCTAAT              GAGATG AAAA CACCTC               GTTTACTGCAATATC  44 19
        invC NONE
        spaM NONE
        spaN 1041059 .. 1041073 +  -2.1  -3.12351   ATCTGGCGAGGAGGA               TGACG CCTGA TGTCA               TTGCGTGTGAGACAG  42 16
        spaO NONE
        spaP NONE
        spaQ 1042924 .. 1042943 +  -3.6  -2.76037   CTGGCGTTGGCTAAG            GGGTAAAA AATG TTTTACGC             GTTGTACTTTGAAAT  43 20
        spaR NONE
        spaS 1044837 .. 1044847 +  -2.4    -3.767   TGAATGTTCACTAAC                 CACC GTC GGGG                 TTTAATAACTGCATC  51 81
        sicA NONE
        sipB NONE
        sipC 1048467 .. 1048523 +  -7.9  -3.34806   GCTTAATCTGAAAGG TCATCTATACGCCATCATGGGTGTGAT TTA ATCGCGCTCCTGATGGCGAACTGGGGA TATTATGCTTAATAT  65 35
        sipD NONE
        sipA 1051616 .. 1051630 +  -2.1  -2.60075   TTACTACCGTTGATG              GCTTGC ACAT GCA-GC               GTTAATTAACCGGGA  39 6
NFH28_RS05070 NONE
NFH28_RS05075 1052199 .. 1052210 +    -3  -2.90075   AATTTGAAGAAGCAA                TCTT ATAA AAGA                 TATAATTCAAGAGGA  42 18
        sicP NONE
        sptP 1054252 .. 1054285 + -14.9  -4.18019   AAGCTGATAAAAACA     TAGCTTACTTTTAGA ACTA TCTGAAAGTAAGCTA      TTTCTGTATAATTAT 100 34
        prgH NONE
        prgI NONE
        prgJ NONE
        prgK NONE
        orgA NONE
        orgB NONE
NFH28_RS05135 1062970 .. 1062982 +  -3.3  -3.17982   AAAGAGGCAATTGAC                TGGTG AAC CCCCA                TTGCTGGCGATTTGT  46 20
        hilC 1064194 .. 1064206 +  -6.3  -2.96307   TTAGCTTTATGCGTA                CAATG AAC CATTG                ATTTGTGAAATTATT  55 12
        sprB 1065450 .. 1065468 +    -6  -3.90048   AGGTGGTTGGTAGCC             TGGCTCAA TCA TTGAGGCA             TATTTTTGCAGGCAA  66 128
        avrA 1066847 .. 1066858 +  -2.2  -2.77043   GCAGTAGTGTGGTAT                TCAG CCCG CTGG                 CTTTCGCCTGGTGCG  39 456
NFH28_RS05175 1070610 .. 1070620 +  -2.4  -4.25104   TTAAGCCCCAGACGC                 TGCG CCG CGCC                 TTTTGGTCCAGCCAC  60 163
        hycA 1077214 .. 1077244 +    -9  -3.65542   CGTTGCCCGCTTTGA       TTCGCGATGTGGCG TTG CGCCATGTCATGAA       TGTTTTGGGGATGGG  75 49
        hycB NONE
        hycC NONE
NFH28_RS05225 1080675 .. 1080693 +  -3.7  -2.90992   TGCGTTTTTAGCCTT             CGTCTCC TTGCT GGCGGCG             TGATTTAAGAGAGTT  46 4
        hycE NONE
        hycF NONE
        hycG NONE
NFH28_RS05245 NONE
        hycI NONE
NFH28_RS05255 1085514 .. 1085526 +  -7.7  -3.31144   CACTGGCGACATTAC                GTGTC ATC GACAC                TTGTGACGATGACAC  65 91
        hydN 1086242 .. 1086253 +  -5.8  -3.34962   GCATTGCCGGATGGC                GGCA TCAA TGCC                 TTATCCGGTCTACGG  56 73
        hypF 1089063 .. 1089089 +   -10  -3.54424   CGCCGCGGTTGACGG         CTACTCCGGCGC GGC GCGCCAGAGCGG         TTTCCGGGCGTAAGC  71 508
        norR 1092993 .. 1093006 +  -2.3  -4.25283   GCAGGTTAATGGCGC               CGGTG AGTT TGCCG                TTTTCATCGACCACT  60 66
        mltB 1099351 .. 1099376 +  -9.8  -3.89505   GCGCTAATTTACGCT         TAG-GGAGGGG AGCAC CCCCTCCGCTA         TTATTATGGCTTTTT  81 34
        pncC 1100318 .. 1100337 +    -8  -2.84098   CTACAAAACACTTGA            TACTGTAT GAGC ATACAGTA             TAATTGCTTCAACAG  61 26
        recA 1101530 .. 1101549 + -11.4  -4.26189   TTAAATTACCATCAA            GGGCTGCA TTTA TGCGGCCC             TTTTGGCATTTCTCC  93 92
        recX 1102135 .. 1102181 +  -2.9  -3.25652   CTTATTCCCACTTTT TCCGTC-TGGACGCGGGTTGCT TAAC GGCGAACAGCGTCTGCGACGAA TATTCCTTAAATACA  45 80
        alaS 1104964 .. 1104985 + -17.3   -3.6502   ATAAGCGTTCGTTGG           CGCCGCAGC CCGT GCTGCGGCG            TTTACGTCAACGCTA 100 43
        csrA 1105392 .. 1105406 +  -4.2  -3.35679   TCTCACTTTTCGGGT               GAGACG CAG CCTCTC               TTCTCGCTCGCCCGC  50 51
NFH28_RS05355 NONE
NFH28_RS05360 1105834 .. 1105844 +  -5.4  -3.10796   GTTCGAATCCTCCCG                 GATG CAC CATC                 TCTTACCTGATACGG  52 17
NFH28_RS05365 1105973 .. 1105983 +  -5.4  -3.27029   GTTCGAATCCTCCCG                 GATG CAC CATC                 TCTTACTTGATACGG  54 17
NFH28_RS05370 1106246 .. 1106256 +  -5.4  -4.04806   CGAGTAATCCTCCCG                 GATG CAC CATC                 TTATTTAGTGTGGCA  65 151
NFH28_RS05375 NONE
        yqaB NONE
NFH28_RS05385 1107767 .. 1107784 +  -3.5  -2.76171   ATTGTAGGTTTGGCA             TGT-ATGG CCG CCATTACA             GTTATGCTTATTAAA  43 43
        gshA 1109483 .. 1109499 +  -2.2  -4.85782   TACTCAGACTCGCCC              CGGAAC AAAGA GTTCAG              TTTATTTTTAAAAAA  66 126
        luxS 1110082 .. 1110100 + -10.2   -5.5604   CAGTATTTAAATTAA             CCCCGGTT TAT GGCCGGGG             TTTTTTATTGCTTAA 100 60
NFH28_RS05400 1111783 .. 1111798 +    -9  -4.41206   TGGTCTACTAAAAAA              GGGATC CGCA GATCCC               TTTTATCAGATAGTT  85 45
NFH28_RS05465 1126711 .. 1126722 +  -7.2  -3.16564   CGATAAAAATCCCCA                CCGC TGCG GCGG                 TTCCTACGCTACACC  59 150
NFH28_RS05475 1127509 .. 1127538 +  -8.5  -2.53911   GAAAAAACCGACTAA       AAG-CGCGACTGGC AAT GCCAGTCGCGACGC       TAACTTACGCCTTAG  63 26
        stpA 1129234 .. 1129244 +    -4  -4.58283   GTGACATCTGCCGCT                 TTGA GGA TCAA                 TTTTTCGCCCGGTTC  69 167
NFH28_RS05505 1130631 .. 1130648 + -14.1  -3.31263   AATTACCGGCCACCG             GCGGCGC ATAA GCGCCGC              TTATCAGGATAACCT 100 39
        lysM 1131229 .. 1131248 + -13.6  -2.62192   GAATAATGGGAATCG            GCGTCAGC AAAT GCTGACGC             ATTAATTCGCTGGCG  78 88
        tctD NONE
NFH28_RS05565 1143998 .. 1144019 +  -2.9   -4.2717   AGCACGTTTACAAAA           AGTCGCATC TTGA GGTGTGACG            TTTTAATCAAATGAT  58 65
NFH28_RS05570 1145126 .. 1145156 +  -9.8  -2.59876   TCTTTAAAAATAGCA       TTTCGGCAGTGGTG TCA TATCATTGCCGAAG       CATTTTATCTCCTGA  68 47
       pipB2 1149643 .. 1149654 +    -3  -2.88044   ACGGTAAAAATATCT                GAAT AACC ATTC                 CTATTTTCTCAAGTA  42 153
NFH28_RS05590 1150035 .. 1150071 + -17.5  -3.13522   TGATGGTTTTCTGTC    TGCAAAGCGCCTGATAA ATA TTACCAGGCGCTTTGTA    TGTTGGTGCCAACAT 100 38
NFH28_RS05595 1152734 .. 1152756 + -17.8  -3.29043   CTCGTTTTGATGGAT           TATGCCCGCC GCT GGCGGGCATA           TTCTGGCGGCGGGTT 100 31
NFH28_RS05620 1161405 .. 1161416 +  -4.4  -2.87132   GTCTCGTCACAGTAC                CAGT TTGC ACTG                 TATGTCCGGCGGGAG  48 381
NFH28_RS05630 NONE
NFH28_RS05635 1163484 .. 1163499 +  -3.2  -2.73542   AGTTATAAAAAATCT              TGCCGT TCTC AAGGCA               TCATTAAAAATTAAA  43 39
NFH28_RS05640 1164540 .. 1164555 +  -5.4  -3.29727   AAGCAGCATTGACAC              GGTTTC TTGG GGAACC               TGTTAATTGGTTGGA  56 260
NFH28_RS05645 1165178 .. 1165196 + -11.8  -5.49809   CTGGTGGTGCGATAA             GGTTCTGA TTT TCAGAACC             TTTTTTTAAAGTTTA 100 251
NFH28_RS05655 1167458 .. 1167503 +  -5.6  -2.71094   GGGGTAAGAAAGCGG CTCGGCATACTGC-CCT-ATAA TAAA TTGTTAGGAGAAGTACGCCGAG TAGTGTGTAGCTATT  50 332
NFH28_RS05670 NONE
NFH28_RS05675 NONE
NFH28_RS05680 1170853 .. 1170866 +  -2.4   -4.2828   TTTTCTGTAGGCCGT               GTAC CTAAAT GTAC                TTTTGCTCCATCGCG  60 319
NFH28_RS05695 1173396 .. 1173420 +  -6.3  -2.78816   TCGCAGTGGGTGCCA          TCGTCGAGCCG CAA CAGCTCGGCAA          TCTCGTCCAGACTGA  50 334
NFH28_RS05705 NONE
        merP NONE
        merC 1174781 .. 1174791 +  -2.4  -3.28791   ACGGCTGCGAACTCC                 CCGC CAA GCGC                 TTGTGAAAGACGGCT  45 9
        merA NONE
        merD NONE
        merE NONE
NFH28_RS05735 1178079 .. 1178093 +  -7.8  -3.48276   GCGGCCGATATGGCG               GCTCAG GCG CTGGGC               TTGTCTCGGCGCCAG  67 244
NFH28_RS05745 1180092 .. 1180134 +  -8.5  -2.72954   CAGCGGCCCCATGGC CCAGGTCATCGGTCGC-ATGG AGG CCATCGCCGCCGAT-ACCGGG TGCTCTATCGTGTTC  64 425
NFH28_RS05755 1181556 .. 1181582 +  -5.1  -3.06862   GATTCCCTTTCGACC         CGAGCATCCGT ATGAG ACTCATGCTCG         ATTATTATTATTATA  51 282
        sul2 1182433 .. 1182444 +  -2.2  -3.08867   GTTAACTGCACATTC                GGGA TATT TCTC                 TATATTCGCGCTTCA  42 36
 aph(3'')-Ib NONE
NFH28_RS05770 1184449 .. 1184470 +  -7.9  -3.98172   GTTTGAGCAGAGCAA           GCGCGCGACC ATA GG-CGGGCGC           TTTATCCGTGTTGAT  71 352
NFH28_RS05795 1187753 .. 1187776 +  -6.6  -3.58343   CGCGGCGTTCGCGGT          CTGCTGGTGC ATAT GCTCCAGTGG           TTTGCGGATGCTGGG  64 144
NFH28_RS05835 1207317 .. 1207336 +  -5.8  -3.51825   GTTCGCGCCAAAGAG            GTTTA-CCG TGC CGGATAAAC            TTGTGGTTGAAGTGG  57 8
NFH28_RS05840 1207602 .. 1207620 +  -3.1  -3.64716   GCGCGCCGAAAAATC             GGCTGGT AGATA ATTAGCC             TCTTTTGCCGGATAA  51 13
        grpE 1211614 .. 1211634 +    -9  -5.53288   GAAGTAAAAGTTTGA            TGGCCGAT GTAAA GTCGGCCA            TTTTTTTAGCTTAAA 100 34
         ffh 1216250 .. 1216277 + -13.4  -4.43307   GCTTTTAATATGACG        CCGGGCTCCGTT CCTC GATGGGGCCCGG         TTGTTTTATTCACAC 100 285
        rpsP NONE
        rimM 1217101 .. 1217111 +  -2.4  -3.33744   TACTATCGAAGTAGA                 CTGG GAT CCTG                 GTTTTTAAACCACCG  45 7
        trmD NONE
        rplS 1218360 .. 1218382 + -10.5  -5.33866   GCTTGTAGAAAAGAA           GGGGCTGGC ATTAC GCTGGCCCC           TTTTTTATGGGTTTG 100 66
        aroF 1221713 .. 1221729 +  -2.3  -2.52933   TGGCGGTGCGCGTCG              CATAAGA GGT TGTTATG              GTTGCTGAATTGACC  39 21
        tyrA 1222869 .. 1222883 + -11.4  -5.37593   ACATCTATACTAAAA               GCCAGC TTT GCTGGC               TTTTTTCGTTTAAGG 100 46
NFH28_RS05925 1224189 .. 1224215 +  -4.3  -4.67353   GCTGCCGAGCGCCGC         GACGCGCGG AGAGTTTGC CTGCGCGAC         TTTTTCCATCGCTGC  71 400
        rluD NONE
        yfiH 1228446 .. 1228460 +  -5.7  -3.83998   TTCACCTTGAATAAT               TGAGG GATGA CCTCA               TTTAATCTCCAGTAG  61 98
        clpB 1231096 .. 1231113 + -10.5  -5.27335   CAAATTTGAATAAAA             CGGGCCC TGAC GGGCTCG              TTTTTGTTTAAAAAC 100 45
NFH28_RS05965 1233094 .. 1233107 +  -2.3  -2.72471   AAGAACTGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 46
NFH28_RS05970 1233270 .. 1233305 +  -9.2  -4.00532   AGTCACCTGCCCTAA    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
NFH28_RS05975 1236615 .. 1236628 +  -5.3  -3.64703   GTGTAAAAGATTCGT               TTCTG GCAA CAGAA                TTTGCCTGGCGGCAC  57 205
         rrf 1236760 .. 1236791 + -17.4   -5.1634   AGGCATCAAATAAAA      CGAAGGGCCCTGTC GGAA GACAGGGCCTTTTG       TTTTTGTCTGTTTCT 100 37
NFH28_RS05985 NONE
NFH28_RS05990 1238957 .. 1238983 +  -6.6  -3.19463   TCAAAGAAAACATCA        GCCCT-ATCGC TGCGCT GCGGTCAGGGC         TTACTCCCTGGTGAC  56 165
NFH28_RS06025 1245847 .. 1245860 +  -9.5  -2.57344   CGCCCGGTCAGACAA               GGCGC TTTC GCGCC                GTTATCCGGGCGATA  68 93
        grcA 1247307 .. 1247331 + -16.5  -5.34857   ATCCGGTAATAACAA          GCGGAAGAGGC CGG GCCTTTTCCGC          TTTTGTTTTATTTGG 100 46
NFH28_RS06045 1248927 .. 1248948 + -14.5  -3.44206   TGGAAGATAAAAAAA           TGCCGGGTT AACG AACCCGGCA            TTATCATCACTCTTC 100 15
        trmN 1251467 .. 1251478 +  -3.6  -4.08064   TGCTGAATCACCACC                CGCT CATC GGCG                 TTTTCCACGCGGCTT  60 335
        rseD NONE
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 1256283 .. 1256295 +  -4.1  -4.96848   AGTCAACCTACGACA                TCATG AGT CATGG                TTTTTGTGTCCACCA  74 430
NFH28_RS06090 1257696 .. 1257708 +  -4.1  -4.15044   GCCACTCATTGACTT                TGGTT TTA AGCCA                TTTGTTGGAGCCACC  60 116
NFH28_RS06135 NONE
NFH28_RS06140 1264430 .. 1264454 +  -6.4  -3.96148   ACCAAAAAGGCGAAA         GCCG-CGGTGA GGGG TCACCAACGGC          TTTCTGGTGCAAAAA  66 52
NFH28_RS06145 NONE
NFH28_RS06150 NONE
NFH28_RS06155 NONE
NFH28_RS06160 NONE
NFH28_RS06165 1267678 .. 1267697 +  -2.8  -3.16288   GCTCGTATCGCGCTG            GCATCGCTC GAA GAG-GAGGC            TATTGGTGAAGTTTC  45 128
NFH28_RS06175 1268836 .. 1268862 +  -6.6  -4.68103   TAGCGGACGCGCTCT         GATGTATCGTCG TGG TGACGAGATATC         TTTTGTTCCCCTTCA  79 182
NFH28_RS06180 NONE
NFH28_RS06185 NONE
NFH28_RS06190 NONE
NFH28_RS06195 NONE
NFH28_RS06200 1271336 .. 1271350 +  -7.1  -5.59534   TCACCGCGACAGAGA               CACGC CGCGA GCGTG               TTTTTTATTGTCGTT 100 114
NFH28_RS06205 1272395 .. 1272417 + -12.8  -3.61164   CAACTGCATGACCCA           TGACCAGTGG ACT TCACTGGTCA           ATTTTTTCCGCCATT  95 337
NFH28_RS06210 NONE
NFH28_RS06215 1272795 .. 1272812 + -10.5  -5.64421   ACATATTCCATTTGA             GGCTGCC ATTC GGCGGCC              TTTTTTATTTCCCCT 100 42
NFH28_RS06225 NONE
NFH28_RS06230 1274696 .. 1274712 +  -2.2  -2.86432   CCGTCGGCGTGAGGC              GGAGCG TGCTC TGTTCC              TGTCATGATGTTCAA  41 1
NFH28_RS06235 1275489 .. 1275503 +    -5  -3.53779   AGCTTCATTACGTGT               CTGAAG TAC TTTCAG               TTCGTATTTTCCGGA  55 324
NFH28_RS06245 NONE
NFH28_RS06250 NONE
NFH28_RS06255 1278734 .. 1278760 +  -2.9  -2.66042   CCGCCGGGCACCTGT        GGGGGTGAGACT GTGA AG-CGCACCCCG         GTTCTGGTGGATGTT  40 10
NFH28_RS06260 NONE
NFH28_RS06265 1281819 .. 1281829 +  -5.4  -2.72263   GCCACCTGATAAGGA                 GACA GTA TGTC                 ATTTACCACCACTAT  50 32
NFH28_RS06270 1282179 .. 1282193 + -12.8   -4.1043   TTACCGTAATAAGAA               GGCCGC GAA GCGGCC               TTTATCGTATTTAAC 100 32
NFH28_RS06275 1283267 .. 1283281 + -11.4  -4.45068   TTAAGCATCCCAAAA               GGCCTG ATT CAGGCC               TTTATTGTTACAAAT 100 37
NFH28_RS06280 NONE
NFH28_RS06285 1284056 .. 1284075 + -16.4  -3.53343   GAATGTTTGACTGCT            CCCCGGCC TAAA GGCCGGGG             TTTCCCGGAGGCATT 100 15
NFH28_RS06290 1284770 .. 1284786 +  -3.6  -3.93782   TCTCCGTGGGCTAAC              ACTGCC AGCCC GGCAGC              TTTGATATTACGTGC  58 123
NFH28_RS06300 NONE
NFH28_RS06305 1287133 .. 1287148 + -11.8  -3.48924   CTCTCTTATCAGTCC              GCCCCG GTTC CGGGGC               TTCTATGGAAAATCA  88 43
NFH28_RS06310 NONE
NFH28_RS06315 NONE
NFH28_RS06320 NONE
NFH28_RS06325 NONE
NFH28_RS06330 NONE
NFH28_RS06335 NONE
NFH28_RS06340 1293308 .. 1293337 + -12.9  -4.10161   CAACAGAACAGATTC       AGACAGAACCGCC TCCG GGCGGTTTTGTCG        TTTTACGGGGTAATA 100 41
NFH28_RS06345 1296715 .. 1296730 + -10.4  -3.62354   ACAACTTCACAAACT              GACCGG ATTT CCGGTC               TCTTTCGTTTAACAA  78 24
NFH28_RS06350 1297016 .. 1297033 + -10.5  -5.24129   GTGAATGAATCTGAA             GCCTGCC TGCG GGCGGGC              TTTTTTATGGAGGCA 100 44
NFH28_RS06355 NONE
NFH28_RS06360 NONE
NFH28_RS06365 1300828 .. 1300862 +  -5.1  -2.95476   TTTGTCAGGAAAGCT     CAGGCCTTATTTATA GCAAA TATGAAGAAGACCTG     TCTGTCATAACTGAT  50 41
        lepA 1307399 .. 1307411 +  -3.4  -3.64609   TCCCTAAGGAGTTGG                CATG GCGAA CATG                TTTGCCCTGATTCTG  51 41
        lepB 1308392 .. 1308424 + -17.2    -4.015   GTGATGAAATGATCG     TTCACGCTGCCGTCT TTTT AG-CGGCAGCGTGAA      TTATTTCCTGGATAA 100 43
         rnc NONE
         era NONE
        recO NONE
        pdxJ NONE
        acpS 1312522 .. 1312547 +  -3.3  -4.39329   ACGCCTATTTTCTGC         TCGG-GCCAG CTCTTTT CTGGCGCTGA         TTTGTTATCTACAGT  62 454
NFH28_RS06450 NONE
NFH28_RS06455 1315687 .. 1315715 +  -9.6   -4.0896   GCGCAATAAACTTGA        TAGCTCTTCTGC ATGAG GCGGAAGAGCCA        TTTTCAAACCAGTTT  81 32
        murQ NONE
NFH28_RS06470 NONE
        yfhb 1319591 .. 1319603 +  -3.3  -3.02471   CAGCTCGAATAGTGA                AACGC ATA GCGTC                TGTGTATAATGCCGC  45 29
        tadA 1320485 .. 1320495 +  -3.2  -4.74103   CCGTAGGTTAGCTTA                 CTGT AAT ACGG                 TTTTTGGCTTAACAG  70 347
        purL 1325921 .. 1325939 + -11.7  -5.24129   CCCGATAGCCATTAA             GCCCCTC TTCAC GAGGGGC             TTTTTTGTAGACGGC 100 45
        qseE NONE
        qseG NONE
        glrR NONE
        glnB 1330996 .. 1331007 +  -5.8  -3.36991   CAGACGCGCAGCACC                GAGC GGGC GCTC                 TCTTTCGGGCTGCTC  56 525
NFH28_RS06545 1340539 .. 1340577 + -12.5  -3.69621   ACTTATGCGCCATAA  CG-TGACGCCGCCGGA AGTCATTA TCCGGCGGCGTTGCCG   TTTGAACTTCTCCCT  95 90
NFH28_RS06550 1341932 .. 1341944 +  -4.7  -4.57073   TCAGCGCTACGCCGC                GCGGG CAT CCCTC                TTTTTGAAACGCCTG  71 148
NFH28_RS06560 NONE
NFH28_RS06565 1345087 .. 1345099 +  -9.1  -4.77438   GAGGAAGAGCTTGCC                GACGC GCG GCGTC                TTTTTACTGGTGCGT  93 290
        trmJ 1350610 .. 1350623 +  -3.9  -2.71681   TAAATACCTGACTAA               TTTAC TCAA GTAAA                TAGTTGACCAAATTA  45 65
        iscR 1351370 .. 1351393 +  -2.4  -2.72144   AGCCGGTTGCCTGAT          TCCTTGCATT GAGT GATGTACGGA           GTTTAAGAGCAATGA  40 171
        iscS NONE
        iscU NONE
        iscA 1353523 .. 1353549 +  -8.7  -4.30719   AGTAAGAAGGTATAA        CCCCAC-CGTGG TCGC CTGCGTGTGGGG         TTTGTTCTGACAGGC  84 163
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 1356711 .. 1356732 + -15.1  -3.78775   TAGCAAAAGATCTAA           CGGGCTGCC CTAC GGCGGCCCG            TTTGCTAATAAGGAA 100 228
        pepB 1358054 .. 1358079 + -11.1  -3.12395   ACGGTGTTTTTGTAG         GCCGGGTAAGCG AAG CGCC-ACCCGGC         ATTTTGCCTGATGGC  76 41
        sseB 1359377 .. 1359392 + -10.4    -5.626   ACCAGCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGGCCTG 100 478
NFH28_RS06665 NONE
        pbpC 1368751 .. 1368767 +  -3.1  -4.59853   TCATTTAATTTAAAG              TTAATGA GAA TTATTAA              TTTTTCCGGAATTAC  66 67
NFH28_RS06675 NONE
        dmsB NONE
NFH28_RS06685 NONE
NFH28_RS06690 1373559 .. 1373569 +  -2.6  -3.09878   CTAATGCTCATTTTA                 TTTT AAA AAAA                 TGTTACCTGCATCCA  43 50
         ndk 1374203 .. 1374235 +  -4.1  -5.04249   ATTTGTACAATGCAG     CGCCCCCGGACGAGC AGTAA GCTTA-CC-GGGGCG     TTTCTTTTTTCAACC  76 142
NFH28_RS06700 1375632 .. 1375642 +  -6.8  -3.50045   GTTTTGTCATCTGCG                 GCCT GAC AGGC                 TTATACTGTCTGACT  62 198
        rodZ NONE
        ispG 1377909 .. 1377929 + -13.3  -3.00298   AAAATAAGAACGTGA            TGGGAAGCG GCG CGCTTCCCG            TGTATGATTGAACCC  86 34
        hisS NONE
NFH28_RS06720 NONE
        bamB 1381135 .. 1381155 + -11.1  -4.60746   GTGTGTTTTAAAAAA            CGGCTCCTG GTG TAGGGGCCG            TTTTCCTGTTTTTAA  95 52
         der 1382721 .. 1382748 + -10.6  -3.60296   TTCAGTAATATTCCA        GGCCTGACAAGCG CTG CGCTA-TCAGGCC        TTTCAAGTAAAAGTA  83 47
NFH28_RS06735 1383110 .. 1383120 +  -4.6  -4.59946   TATCAGCATAGTATC                 CTGC CCG GCGG                 TTATTTTATTCTTTT  71 126
        sinH 1385550 .. 1385580 +  -6.9  -3.04398   TAGTCAGAAATAGCG      TCAGCGTTGTGGCT GACC AGCCA-GCCGCTGA       ATTTTGAGAAAAAGG  58 28
NFH28_RS06745 1386578 .. 1386601 + -15.4   -4.0896   AAGTTGTCCTCAACA          TACCACTCCC CGCG GGGAGTGGTA           TTTTCCGCGCACTTT 100 39
        ratA 1392364 .. 1392379 +  -3.2  -2.73505   ATCCCTTGTAGCTGG              CGCTGT TCCG GTAGCG               ATGTATTTTTACGTT  43 108
        ratB 1400109 .. 1400143 +  -2.3  -3.64487   CCTTTTTGTTTCACG     CATTTATTTATTTCA ATATA TGAAGTTATTAAATG     TTATTCACGATATAA  49 380
        shdA 1406579 .. 1406601 + -14.1  -4.08216   GTAAGTTAGACAAAA           CCGGGCGGG TGTTC CCTGCCCGG           TTTTGAGGCGAATGA 100 37
        guaB 1409712 .. 1409735 + -13.9  -4.56113   GGCTCCTGATTTTCT          TCGCCCGAC CTTCGT GTCGGGCGA           TTTATTTAATCTGTT 100 32
        guaA 1411401 .. 1411420 + -12.2  -5.42975   TAAATGTGAATTTAA            CCCTCTGT TTTT ACAGAGGG             TTTTTATTTATGTGC 100 74
NFH28_RS06795 1413110 .. 1413135 +  -2.7  -4.50358   ATTGCGTCAGTTGAT         TTATCTTATAT TGTT ATGGAAGATAA          TTTTAGTATTTACAT  63 459
NFH28_RS06805 1413257 .. 1413268 +  -4.4  -2.91511   TTTAATAATTACAAT                CGAT GACT ATCG                 TGTGATGTATATCTC  48 20
NFH28_RS06810 1415568 .. 1415605 +  -9.1  -2.71924   TATTATCTGAGATTC   AGTAAAGACAGACGCCGC GGC GCGGCGTCTGGCTC-ACA   ATTTACGCGGCGATC  66 21
         upp 1422143 .. 1422161 +   -11  -5.81412   AATAAATAATTAAAA             GCCGACTT TAA GAGTCGGC             TTTTTTTTGAATAAA 100 44
        uraA 1423509 .. 1423529 + -18.3  -3.58726   ATCAGTAACGGGTTG            CCGGGCAGC GAT GCTGCCCGG            TTCTATCTCACGGGA 100 33
NFH28_RS06845 1424413 .. 1424441 +  -8.1  -3.09327   GCTCCATCAGTTTAG        GGTGTTCAACCAG CGC CTGGATTAACGCC        TCTTCACTCAGCTCA  60 141
NFH28_RS06860 1427570 .. 1427589 +  -9.3  -5.18726   CGCTCTTTTTTTTAA            TGCCGCA CCGTGT TGCGGCA             TTTTTATTGTCGGAA 100 134
        dapA NONE
        bamC 1431173 .. 1431192 + -11.4  -5.31275   ACAAGTAATTTAACA            GGGCTGGA GCAA TCCGGCCC             TTTTTTCTGATAAGA 100 33
NFH28_RS06890 1432066 .. 1432087 + -11.5  -2.90054   TAATTCCGCTTCTGA           CCGGGGGGC AACC GCTCTCCGG            TATCATCCTTTCCTC  78 38
NFH28_RS06895 1433056 .. 1433067 +  -2.2  -2.64735   CTTTTGATAAACCGG                GGCA GGGA TGTC                 TGATATCGATGCGCT  39 34
        tmcA 1435072 .. 1435097 + -11.2  -2.64973   CGGCGGTGGGGACCA         TGCCGGATAG CGATAC CTGTCCGGCA          TGATATCCGGTTACT  77 16
        ypfM 1437336 .. 1437356 +  -8.3  -5.24129   TAGGGGATAAGAAAA            GGCGACT CAACGAA AGTCGCC            TTTTTTGTGCCCGAC  95 51
        aegA 1444682 .. 1444694 +  -9.1   -3.5393   CGATAAACATTTTCC                CGTCG GGG CGACG                TTTAACAGGCCTGAT  73 165
        nudK 1447076 .. 1447087 +    -3  -3.53012   TGGACTGAAAAAAAA                GAAA TATA TTTC                 TTTACACAAAAAAGA  48 33
NFH28_RS06950 1448217 .. 1448232 +  -5.4  -3.11955   CGGATGCCTGGCCTA              CGCTGTG GAT CAC-GCG              TTGAATCCTGGTTGT  52 6
NFH28_RS06955 1448595 .. 1448635 +   -12  -3.12449   GAGTCTACGAAGTAA  TTTTGCACAGCCTACAGA ACAGG TCTGCAGACTGTGCAAAG  TCTGTGTTGCTAACG  81 26
        maeB 1454201 .. 1454218 + -12.7  -5.60993   TTACTCTCTCTTCTG             GCGCAGG TTCT CCTGCGC              TTTTTTTATGCGCCG 100 48
        eutS 1454917 .. 1454931 +  -2.9  -3.15861   TTTACCCTGTGTGAG               TTAAC AAAAA GTTAA               TTGGTGGCGGTAATG  45 11
        eutP NONE
        eutQ NONE
        eutT NONE
         pta 1457905 .. 1457922 +  -2.6  -2.83403   CACTGGTTGAATGAA             CGGTCC CGTTCT GGACCC              CTTTAATGAGAGGAA  41 27
        eutM NONE
        eutN NONE
NFH28_RS07010 1460031 .. 1460041 +  -6.8  -3.48924   ATGCGTGCTGGTGGA                 TGCG TTT CGCA                 TTGTATAAGGGATGA  62 7
        eutJ NONE
        eutG 1462135 .. 1462162 +  -7.6  -3.57144   AACACGGCGTTAATG        CCGGAGGCGACG TAAA CGTCTTATCCGG         TTTACAAATCAAAAA  67 84
        eutH NONE
        eutA 1464813 .. 1464830 +  -4.1  -2.58544   GAAATCACTCGCATT             TCCTTCC TGAG GGAACGA              CTTATGAAACTAAAG  44 16
        eutB NONE
        eutC NONE
        eutL NONE
        eutK NONE
        eutR 1469393 .. 1469407 +  -4.2  -2.52834   TGGGCTTGATATTGA               TGGGGA GGC TCTCCG               GTTGCTGATAACGTG  44 32
NFH28_RS07080 NONE
NFH28_RS07085 NONE
NFH28_RS07090 1474880 .. 1474897 + -11.3  -3.68359   AATAGCCTCCATTAA             TGCCACG ACTG CGTGGCA              TTCTCATTTTCAGGA  87 81
        yfeX 1475921 .. 1475938 + -12.7   -5.4251   GCATAAAAATGCCCA             TCCCCGC CTCC GCGGGGA              TTTTTTGTCTATGGA 100 128
        tnpA 1476627 .. 1476647 + -12.5  -3.83744   AGGCGCATCTGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTTACCTAA 100 106
        ucpA 1477569 .. 1477596 + -12.8  -3.84992   TCTGATTGATGCCGG        TCTCCTCCTCACG CCG CGTGGGGAGG-GA        TTCTCTTATTCCCTT 100 36
        cysP NONE
        cysT NONE
        cysW NONE
        cysA 1481550 .. 1481575 + -13.3  -5.02074   ATTTGTATAGTTATC         GCCCGGTG-GCG CTA CGCATACCGGGC         TTTTTTACGAGCTGA 100 48
        cysM 1482482 .. 1482501 +    -2  -3.62275   GTTTGGTGAAGAGCA            TTTCAGCC AGGG GGCAGGGA             TTTAAACTAATGAGT  49 1
        pdxK NONE
NFH28_RS07160 1486951 .. 1486968 + -12.7  -3.67597   GTACAGGCAAAAAAA             TGGCGCC CAAA GGCGCCA              TTCTTCACTGCGGCA  95 137
        zipA 1493101 .. 1493117 + -10.8  -5.38249   ACATTTTTAACGTAA              CCCCCG CCTGT CGGGGG              TTTTTTATCATTGAT 100 57
        ligA NONE
NFH28_RS07200 1495528 .. 1495557 +  -4.1  -5.40072   ACGTCGGAAACAGAA       TATTGGCCATCGG GATC CCGTTGGCCAGGC        TTTTTTTCGAACCGC  86 177
NFH28_RS07210 1497421 .. 1497442 + -10.1  -3.09273   GTGAGGTGCGGTCTT           GCCCTGCCA TTTT TGACAGGGC            TGTGTGTTAAAACAG  73 59
        xapA 1499314 .. 1499328 +  -9.2  -4.03234   AACACAATGACTACG               GCCCCG TAT TGGGGC               TTTATCTCACGGCAA  80 40
NFH28_RS07225 1500617 .. 1500646 +  -8.6  -4.82901   GCACATTAATTTTAT       TTGACTGGCGAG AGGATG TTCGCCAGTCCA        TTTTTATGAACAAGG  89 32
NFH28_RS07230 1500821 .. 1500831 +    -4  -2.82933   CGTTAAATCTATTTT                 TTAC TAG GTAA                 TATGGTAAATTCCAG  45 19
NFH28_RS07235 1501902 .. 1501916 +  -9.2  -5.17576   GCAGATAGCAAAAAA               GCGCCT TTA GGGCGC               TTTTTTACATTGGTG  93 164
        gltX 1504012 .. 1504040 + -13.3  -4.24413   CCAGCTGAAACAGAA        TAAACGGCAGG GCAGACG CCTGCCGTTTA        TTATTTGTTAGTCCG 100 43
NFH28_RS07275 NONE
NFH28_RS07280 1505229 .. 1505248 + -11.4   -5.2197   CCACCAACATTCAAA            CCCTCGCT GAAA AGCGGGGG             TTTTTGCTTTTTGTC 100 35
NFH28_RS07285 1507614 .. 1507631 + -12.7  -3.97368   AGCGGCATAAAAAAA             CCGGGGA TAGC TCCCCGG              TTTCTGCATTAAACC 100 40
NFH28_RS07295 1510456 .. 1510480 + -12.2  -3.38812   ACAGAAAGATAGCAG         GCCCGATG-CG TGGG CGTCATCGGGC          TGTTATTCAGCAGGA  85 43
NFH28_RS07310 1514072 .. 1514100 +  -9.6  -3.53444   CCGCCGCGAAAGCCG       CTCGCCGCCGC GATGACCA GCG-CGGCGAG        TTTGACGACGGCTAA  71 328
         glk 1516302 .. 1516318 + -13.7  -5.64006   CTTGTCAGTCTCAAA              CCGCGTG CCT CACGCGG              TTTTTTTCATTGCCT 100 134
        alaC 1518162 .. 1518181 + -13.6  -5.33026   GAGTAGAAAAGCAAA            CAGGAGCC CCAT GGCTCCTG             TTTTTCTTTGCATTG 100 35
NFH28_RS07340 1520591 .. 1520609 +   -16  -3.65812   GCCAGTGAATAGATA             GCGCCGAC AAT GTCGGCGC             TTCTGTTCCCCAGGA 100 256
        pgtC NONE
        pgtB NONE
        pgtA 1526927 .. 1526940 +  -2.4  -2.71364   CAATCTGGCTGACAA               CATC AGCAAC GATG                TCGTTAGCCAGATAA  40 56
        pgtE 1528113 .. 1528144 +  -8.7  -4.72986   TCTAGACCACATCGG      GATGTCATCGGTC ATAACC GGCCGATGACGAC       TTTTTGCTGAACGTA  89 36
        mlaA 1530412 .. 1530430 +   -11  -4.78764   GGCAGTAAATAAAAA             GGTGAGCG CAA TGCTCACC             TTTTTGATCCGTTTC  95 43
NFH28_RS07390 1532428 .. 1532464 +  -9.4  -5.66684   GTTAATCCGTTCATT    CACGACGCCTCCGTCA TCATC TGGCGGAGGCGTTTTC    TTTTTTTGTCGCTTC 100 36
        fadI NONE
        fadJ 1536178 .. 1536191 +  -3.1  -4.56597   ATGGATAAGGCACAA               TGCCGG CCA CCG-CA               TTTTTGCCGCAGCCA  64 151
        sixA 1536899 .. 1536912 +  -9.5  -2.84325   TCAACACCAGCAGCG               CGGCG TCGC CGCCG                TACTCTTTCGGCGCC  64 178
        prmB NONE
        aroC NONE
        mepA NONE
NFH28_RS07430 NONE
NFH28_RS07435 NONE
NFH28_RS07440 1542119 .. 1542146 + -11.2  -3.08798   CAATAACGCCGTGGG        CCGGAAGGCGAC GCTT GCCGCCTTCCGC         TATTGACTGACCCAT  79 35
        fabB 1545570 .. 1545589 + -13.6   -5.4251   GTATCAACAATGAAA            CAGGTCGC TAAT GCGACCTG             TTTTTTGTCTATGGA 100 60
        tnpA 1546278 .. 1546298 + -12.5   -3.7642   AGGCGCATCTGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTCATTCAG 100 106
NFH28_RS07460 1547223 .. 1547261 +  -5.3  -4.82901   GGTATAAACTTCCAG  GTGGATGGGC-GTTGACT CTGT AGCCAACAGAACATCCAC   TTTTTCTCCGCCGAG  76 248
NFH28_RS07480 1549045 .. 1549081 +  -8.6  -2.60212   AATCCTGACGTTCAG    GTAGAGGGGGGCGTGG CCTTT CCCCGCCTTACTCTGC    ATTCTGGAGTAATGC  63 153
NFH28_RS07485 1550472 .. 1550486 +  -7.1  -3.58536   AATCCTGCACCTGGG               CGGTG GTCAG CACCG               TTTGCGGCTGAATTT  60 222
        pdxB 1552526 .. 1552555 + -11.5  -3.80279   TAATGTCTTCTTAAT       GC-TCCCTGTCGAA TAA TGCGACAGGGACGC       TTATGTATTTCTGGA  91 38
NFH28_RS07500 1553574 .. 1553591 +  -4.1  -2.62184   ATTGCGGAGAAGCTG             GTGCAGG AGTA TCTGTAC              TGATGTCCGGACAGC  44 5
        truA NONE
NFH28_RS07510 1555126 .. 1555138 +  -3.3  -5.24531   ATAGAAAGTAACTCA                GCGGT TCG ACCAC                TTTTTTATCCAAAGT  77 37
        accD 1556184 .. 1556216 + -17.1  -3.06515   TGAGGCCTGATAACT      GAAAAGGGCAGGGCC GCA GGCTCTGCCCTTTTG      CTTTTCACCGTAAAG 100 31
        folC NONE
        dedD 1558361 .. 1558386 +  -9.8  -5.27938   AGATAAAAAGTGTGA         TGGCGTTGAA TATTTT TTCAGCGCCA          TTTTTATTTACGCGT 100 208
        cvpA NONE
        purF 1560536 .. 1560567 +  -9.4  -2.52464   AACGAAGGCTAATGG      C-TTTGCCAGCGGCG CAA TGCCGCTGGCCGATG      TCAATTACGCACCAC  68 29
NFH28_RS07545 NONE
NFH28_RS07550 NONE
NFH28_RS07555 1566227 .. 1566251 + -14.9  -2.62613   ACGCGTTAACGCATA          ACCGCCGCGGC TAT GTCGCGGCGGC          ATCTTTGACCTCACG  89 32
NFH28_RS07560 NONE
NFH28_RS07565 1568319 .. 1568337 + -13.2  -4.37092   GCATTATTGTCCCTG             TTGCCCTG TTT CAGGGCAA             TTTTGTAACCGCGAT 100 58
        argT 1569395 .. 1569418 + -10.4   -4.7497   CTGGGGAACTATCAC          GGTGCAAAAT AGAT GTTTTGCACC           TTTTTGGTGCATAAG  91 63
        hisJ 1570486 .. 1570497 +  -7.2  -2.62184   CGGGCAAGGCACAGC                CGCC ATCC GGCG                 TGATGTGAGGCAAAA  57 134
NFH28_RS07580 NONE
        hisM NONE
        hisP 1572848 .. 1572860 +  -9.1  -4.07568   GAAATGCGAATCCGG                CGGCT TCA AGCCG                TTTTGGCAGCGCCCG  80 136
        yfcF NONE
        yfcE 1575824 .. 1575838 +  -2.1  -3.12402   ATGATCAAAGTATCA               TTGCG CAGGT TGCAA               TTAACTCGTAATTTA  42 0
        yfcD 1576491 .. 1576520 + -10.1  -3.74224   TCCCGCATACATAAA       CTGGAGGCGATGGA TTT TCGATCGC-TCCAG       TTTCCCTGATTTAAC  80 56
NFH28_RS07625 NONE
NFH28_RS07630 NONE
NFH28_RS07635 NONE
NFH28_RS07640 NONE
NFH28_RS07645 1581732 .. 1581760 + -11.8  -4.20084   TAATCATGGAGATAT       TGCCGGATG-GCG CTGA TGCTCATCCGGCA        TTTTGGATCAATGAT  95 38
NFH28_RS07665 1587750 .. 1587769 + -10.8  -5.52384   ATTACGCATATAAAA            GAAGGCAT ACCA ATGCCTTC             TTTTTTTCATCGCCA 100 51
NFH28_RS07670 NONE
NFH28_RS07675 1588982 .. 1588999 + -14.1  -2.70946   CCTGATCATGATATC             GCCCCGC TTTG GCGGGGC              ATATTTATGGCAGAA  87 36
NFH28_RS07680 1591249 .. 1591270 +  -4.3  -5.10497   TCATCCGGCGCCATA           TCAACCAGC TTTT GCTGGGCGA            TTTTTTCGATCGCTT  80 400
        lrhA 1594782 .. 1594815 +  -9.6  -5.61596   CGTAAATGTAAAAAA     GAGCCGCTG-GCGAT GAAAA AACGCTCAGTGGCTC     TTTTTTTGTGCCCAT 100 64
NFH28_RS07700 1595265 .. 1595283 +  -2.4  -6.13503   GCTGTTTTTATCATT             TTCTACAG TAA TTGTAGGG             TTTTTTTTATTCCTC 100 315
        nuoA NONE
        nuoB NONE
        nuoC NONE
        nuoE NONE
        nuoF NONE
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK 1605360 .. 1605375 +  -2.5  -3.18199   TTCAGTAAGTGAGAT              GCGTG GATGAA CATGC               TTGCCTTAACCATTA  45 16
        nuoL NONE
        nuoM NONE
        nuoN 1610590 .. 1610606 +  -9.5  -3.29829   CCTGAGCCTCTAAAT              GTTGGAT TGC ATCCAAC              TTATGAAAACCTGTG  74 101
NFH28_RS07775 1613188 .. 1613218 + -18.4  -3.05715   TGTCTCACTAAGCGT       CAGGGGATGCCTGT ACT GTAGGCATCCCCTG       TTACGTCAGGCGCTT 100 30
NFH28_RS07790 NONE
        elaB 1616153 .. 1616169 +  -6.5  -4.56597   TTTTTTAGGGCAGTA              CCCCGTA TAA TGTGGGG              TTTTTAACAGGGAGG  76 88
        menF NONE
        menD 1619220 .. 1619235 +  -4.7  -3.00923   CGTTGCAGCAACTTT              TGGCT CAGGTA AGCCA               TCTATGATGTTGCAC  49 3
        menH 1619973 .. 1619983 +  -5.4  -3.41125   TGGCGTGGTAGACAG                 TCTG GCT CAGA                 TTCTGCGTCTCTGAC  56 1
        menB NONE
        menC NONE
        menE 1623245 .. 1623259 +  -2.1  -3.21924   GCCGTTTTGTTTATC               CGTTG ATGTG TAACG               TGTTATGAACAATCA  44 75
        pmrD NONE
        pmrG 1632049 .. 1632069 +  -8.9  -2.64616   TTTTAATACGGATAT            CGTCGCGGA AGG TCCACGGCG            TAATATCGCTCAGAA  59 273
NFH28_RS07880 1633069 .. 1633086 +  -9.1  -4.30576   GCTGACGGCCCTTAT             GTTGGCG TAAA CGCCAGC              TTTTGATGCTAACGG  85 2
NFH28_RS07885 1634439 .. 1634473 +    -5  -2.92398   TGGGAACGACATCGT    GAGCCGGATAA-GGC CGCTAT GCCATTATCCGGCAA     TATCATCTGCTTTTT  50 61
NFH28_RS07890 NONE
        rhmD 1636691 .. 1636702 +  -4.4   -3.1978   ACGGCAACGCCCTCA                TCCT GTTG AGGA                 TATTGCTATGAGCAT  50 62
NFH28_RS07900 1637982 .. 1637992 +  -2.4  -2.86582   CCGGTGGCGCAATCC                 GGCG CTG CGCA                 TCATTAATCTTATCT  41 8
        yfaU NONE
NFH28_RS07910 1639018 .. 1639042 + -14.3  -2.77104   CGGCATAGAACTTTT          AGTGGGAAGGC CTG GCCTTCCCACC          CTTATATACTTATAA  87 33
        glpT NONE
        glpQ 1647353 .. 1647405 +    -9  -3.54543   AAGGTTTGCCATAGT CGAAGTGACGCGCCGGATGAGG GCATAAACG CCTCATCCGGCCTGGCGCAACG TTTGCCAGCGTAAGT  73 40
NFH28_RS07950 1649710 .. 1649735 + -16.3  -2.87931   GATTTCGATATCGCC         TTTTGCCCTGC AGCA GCAGGGCAAAA          TCTCTCCCGGCTGGA 100 51
NFH28_RS07980 NONE
NFH28_RS07985 1658298 .. 1658319 +  -2.3  -3.14132   GACGGGTATACACGG           GAGGTATTGA TTT TCTA-ACCTC           TTCCTGGCCAGGCCC  44 212
        gyrA 1661174 .. 1661191 + -14.1  -5.29846   GTTATTGCTGTGCGA             GGGCCGG ATAT CCGGCCC              TTTTTCTTTGCCGTT 100 42
        rcsC 1664578 .. 1664605 +  -9.8  -3.75024   TTCAATATCAAGATC        CAACACGGCGCT CAGG ATCGCCGGGTTG         TTGTTCATGGTCAGA  74 482
NFH28_RS08010 1669447 .. 1669460 +  -9.5  -5.18357   AAAGATGTTGCTAAA               GGGCC TGCG GGCCC                TTTTTTCATGCCTTA 100 47
        apbE NONE
         ada NONE
        alkB NONE
NFH28_RS08030 1674402 .. 1674414 +  -5.5  -3.28924   GGTATACACCACGAT                CGGCA GCT TGCTG                TTGTAGCGCAGCATC  52 321
        napF NONE
        napD NONE
        napA NONE
        napG NONE
        napH NONE
        napB NONE
        napC NONE
        ccmA 1681799 .. 1681818 +  -6.3  -2.86177   CCGCCGCCTGGCGCT            GACCGGC GGGGGG GCCGGGC             TGTGATGTGGCGTGT  55 1
        ccmB 1682630 .. 1682650 + -10.3  -4.05788   GGCATCATTGTGCTG            GCCACGGGC TGG GTCCGGGGC            TTTGGTTTCGCCCCG  82 176
        ccmD 1683547 .. 1683578 +  -5.8  -3.31726   GCTGACCACCGCCCT      GGTC-CTGTACGCGC TGC GCGCGAATATCGACC      TGTTCTATACCCCCG  56 96
NFH28_RS08100 NONE
        dsbE NONE
NFH28_RS08110 1687482 .. 1687515 + -20.3  -3.75105   GAGAAATAAGACCCT     GAC-GGCCCGGTGGCG CGG CGCCACCGGGCCTGGC     TTGTTACTGCATTCC 100 32
        pagL 1689862 .. 1689879 +  -8.4  -4.08064   GTAGGCATAAAAAAA             CCAGCC CTGACA GGCTGG              TTTTCAAGGGGAATT  78 428
NFH28_RS08130 1691079 .. 1691091 + -10.5  -3.10344   AGATGACACATTATT                CGCCG ATG CGGCG                TATCTTAAATCAGAG  73 156
NFH28_RS08135 1691572 .. 1691584 +  -3.4  -2.73543   CAGGAAGAGATGATG                TCTG CCGGA CAGA                TACTATATGTAAATT  43 149
       sspH2 NONE
NFH28_RS08150 NONE
NFH28_RS08155 1695685 .. 1695711 + -15.3    -3.767   GATATGGACGTTTAA         TAATACGCCCC ATGCA GGGGCGTATTA         TTTACTGGATGAATG 100 26
NFH28_RS08165 1697791 .. 1697809 +    -6  -3.54741   CTTTGACAGTCGTTC             TGAACTGA TTT TCGGTTCG             TTTCGCGAAATCATC  60 146
NFH28_RS08180 NONE
NFH28_RS08185 1700166 .. 1700179 +  -3.1  -2.63381   GGATCTATACCTCTC               TGC-CC GGT GGCGCA               ATCTTTCAGGCTTTA  42 157
NFH28_RS08190 1700870 .. 1700924 + -11.1   -4.7629   ATTTGCATTATTGTT GTAGTTTTATAAAATAAAAAGAGGGG CAAG CCCCTCTGTTTATTTTG-AAATCTGC TTTTTCACTTCCTCA  95 40
NFH28_RS08205 1703937 .. 1703953 +  -9.4  -3.65581   AGTCGATGTTTTGTG              TCGGGG TTTTT CCCCGA              TTATTCCCCGTTGCT  77 62
        yejK NONE
NFH28_RS08230 1708106 .. 1708121 + -11.8  -5.10208   AAACGCATAAAAAAA              CCCCGC CGGG GCGGGG               TTTTTCTTCAACTTC 100 96
        rsuA NONE
NFH28_RS08250 1712390 .. 1712431 +  -7.3  -2.63596   GTGACGGGCGCGCTG TCCCTCAATGGCGCC GAAGAATGCGCA GGCGGCGTTGGGGGA  TGCTATCCGCTACAC  57 37
NFH28_RS08255 1713526 .. 1713545 +  -3.4  -3.71924   GCGCCTGAAAGCGTA            GGCTGGTG GACG CGCAGGCC             TTCTTCGATAATTTG  51 438
NFH28_RS08305 1725013 .. 1725031 +  -4.6  -3.42257   TCGATATCATGAATT             TGATAGTT TAT ATCTATCA             TTGATGTATTTACCG  52 323
NFH28_RS08310 NONE
NFH28_RS08315 1726080 .. 1726096 +  -2.1  -3.19602   CGAACCGGCAATGAT              CCAGCCG ACG CGAATGG              TATTGGTATACAGCG  43 213
        fruB NONE
        fruK NONE
        fruA 1731299 .. 1731316 + -11.3   -5.4833   AAACACGCTAAAAAA             GGCAGAG CGCG CTCTGCC              TTTTTTATTGCCTGA 100 44
        yieE 1734336 .. 1734349 +  -3.7  -4.80882   AGAGGAGGGCTGCCC               GGGCG GCAT CGCCA                TTTTTAGTATCCGCT  71 47
        lysP 1736050 .. 1736067 + -11.3  -6.07374   ACCTGACTCTTCTAA             CCCTCTC ATTC GAGAGGG              TTTTTTGTTTTTTCT 100 102
        cirA 1738316 .. 1738350 + -16.4   -2.5294   CCGTTTCTGACAGAG     ACTGGCGACAGCCGCG TTT TGCCGCTGTCGCCAGA     ATGTTATAACCGATG 100 31
NFH28_RS08375 NONE
NFH28_RS08380 1742796 .. 1742809 +  -8.1  -2.60392   GAATGGCGTCCTGCG               GCTGG CTGG CCAGC                ATTAATTCGCAGCTA  56 247
        folE NONE
NFH28_RS08395 1745619 .. 1745631 +  -3.4  -3.85698   GGCTGTAACCGTTTC                CATC CCTGT GATG                TTTCTCACGCAGCCC  53 69
        galS 1746776 .. 1746793 +  -6.3  -4.21989   GTAACCGTTTTCAAT             CTGTGAG TAAA TTCACAG              TTTATTAACATTGTG  70 54
        mglB 1748328 .. 1748349 +  -3.7  -2.70932   ATAACGTATTTCTTT           TG-CCATCCG GCG CGGATAGTCA           TAATTAAAAAGGCCG  45 109
        mglA NONE
        mglC 1750957 .. 1750985 + -10.2  -3.14211   CTTGCTTATCAGATA       ACCCGGCGCAGCG AAAC TGC-GCGCCGGGC        TTCATACCGAGAGCT  74 58
NFH28_RS08460 1759464 .. 1759476 +  -3.3  -2.89881   CGTCGTAAACGAATA                AGGAG AAT CTCCA                TGTCTGAAATAAATC  44 25
        gtdA 1760496 .. 1760506 +  -2.4  -3.81146   GCCCTGGGGCTGTTC                 CGCG AAG CACG                 TTATTAATTAGGGAG  51 8
NFH28_RS08470 NONE
        maiA NONE
NFH28_RS08480 1763157 .. 1763177 + -11.9  -5.58454   TTTGCTCATCGCAGA            GAGGCGTTA TGA TAGCGCCTC            TTTTTTTGCTGTGGA 100 91
        dusC 1764399 .. 1764416 +  -6.3  -2.50575   CGTATTGCAGCAAAA             TCGTTCA TTTA TGAACGG              GTTAGTGGGACTTTT  48 286
        mdtQ 1766028 .. 1766043 +  -3.2  -2.71011   GGCGGCGGTTATCAT              TCCTGA TTTT TCCGGA               TGATTCAGACAGGGT  43 20
NFH28_RS08500 1766869 .. 1766883 +  -4.9  -3.32963   AAAATAAACGCCGGG               TGCCG GATGG CGGCG               TTATGCCATCCGGAT  54 34
NFH28_RS08510 1768284 .. 1768304 +    -9  -2.79302   GACGATTCTTCTGTA           GCGGCAACG CTGG CGT-GCCGC            TATGATGCCACTGCT  66 85
        pbpG 1769499 .. 1769517 +  -3.7  -3.88787   TTTGCCGATAAAAAC             GCGTCAG CGTTT CCGGCGC             TTTATACAGATGTCC  56 187
        bglX 1773704 .. 1773722 +  -8.8  -2.88663   AGCCTGCCGTCAACA             GGGCGC GATAGCA GCGCCC             TGTCTGGCAATGACT  65 40
NFH28_RS08530 NONE
NFH28_RS08535 NONE
NFH28_RS08540 NONE
NFH28_RS08545 1777828 .. 1777838 +  -6.8  -4.37092   GTTGCTGCTGCTGCG                 CCAG CGT CTGG                 TTTTCTCCGCACCAT  74 238
NFH28_RS08560 NONE
        btsR NONE
NFH28_RS08570 1782119 .. 1782136 +  -2.7  -3.34102   GCTGTCATGTTATTT             TGCTTTC CCTG GAGAGTA              TCGTTTTTCTGATCG  47 512
        apbC 1786428 .. 1786463 + -17.2   -3.1478   CCAAAGAGAATATGA    CATTCACTGCATTAAT ATAT ATTGATGCAGTGAATG     TATTAATAAAATAAT 100 56
NFH28_RS08595 1786975 .. 1787004 + -18.1  -5.82036   TTATTAATTCCGCAG       GCCCATATCATTG ATAT CAATGATATGGGC        TTTTTTATTTGTTGT 100 44
        yehD 1787775 .. 1787794 + -12.8  -5.24129   GACTAATTTATTCAA            CCGGCGGC GTTC GTCGCCGG             TTTTTTATAAGCAAG 100 35
        stcB 1788517 .. 1788548 +  -2.3  -4.70772   TAAACAGGAGTTCAT      CATGCTAAG-GATG ACGCC CATCGCTTCGCTTG      TTTTATTGACTCTGT  64 38
NFH28_RS08610 NONE
NFH28_RS08615 1792267 .. 1792287 +  -8.2  -5.64274   ACATGGGGCTGTATT            TCCCCCTC TGGAT GAGGGGGC            TTTTTTTATCGATGA 100 262
        thiM NONE
        thiD 1794586 .. 1794598 +  -4.8  -2.66964   TCCGGTACATCATTT                CCAC GCGTG GTGG                TAGTATACTGCCTAC  48 10
NFH28_RS08635 1795598 .. 1795639 +  -5.1  -3.59315   CTAAAATACCACGCT CCGTCTTTATCGTGGCGC ACCACCA GCGGCGCGGAAAAG-CGG TTTACCCATGCTTCG  55 240
        fbaB 1800367 .. 1800381 +  -8.5  -3.99805   GATAAGATAGGAGAC               GCCGC CCAAT GCGGC               TTTAAGTTTTTCCGG  74 495
        steD NONE
NFH28_RS08670 1802336 .. 1802348 +  -7.7  -3.72742   TACCTCCAAGAACTG                GCAGT TAA ACTGC                TTGTGTTCATAATGA  71 77
NFH28_RS08730 1821330 .. 1821343 +  -2.3  -3.01791   CCGCCTGGCCGGAAA               GGGCG ATTT TGCTC                TCTTCCGCGCAGCGT  42 420
        alkA 1823661 .. 1823674 +  -3.7  -4.08767   AGAATCACCTGGCAG               CCGCG TTGC CGCAG                TTTTCGCAGAGTCGC  60 312
         udk 1827344 .. 1827369 +  -2.6  -3.14132   GTGATAACCTGGTTA         GCCCTTGA TGTGCTTGAT TTAAGGGC          TTGATGCGCGAAAGG  45 65
         dcd 1827982 .. 1827999 +  -2.6  -2.53263   TAAAGACTGAGCCAT             TCGGCG CAATAC TGCCGG              TCCATTGAGGGTAGC  40 31
        asmA 1830179 .. 1830191 +  -6.2  -3.83026   CACCAAATCCTCCAG                CGGC ATATG GCCG                TTTGCTGTCCAGGAA  63 333
NFH28_RS08770 NONE
         wzb NONE
         wzc NONE
        wcaA NONE
        wcaB NONE
        wcaC NONE
        wcaD NONE
        wcaE NONE
        wcaF 1841105 .. 1841122 +  -4.1  -3.54424   GCGCGTTCAGAAAGT             TACTCCC TAAC GGGACTA              TTTGAGGAAATGAAA  52 16
         gmd NONE
NFH28_RS08820 NONE
NFH28_RS08825 NONE
        wcaI NONE
        cpsB 1846347 .. 1846371 +  -3.5  -3.30124   GCGGTTCGAGGATCG          TTACGGGCG GGTCTGA CGCCTGCAA          TTATGCCCGGTAAGC  48 10
        cpsG NONE
        wcaJ 1849336 .. 1849351 +  -4.6  -2.60508   CCATATTGCACCAGG              GCAGCG TGTA CGCTCC               GGTTTTTCCGCGCTG  46 70
        wzxC NONE
        wcaK NONE
        wcaL NONE
        wcaM 1854846 .. 1854856 +  -2.6  -3.14211   GGTAAGTACCGCTAT                 TTTT ACG AAAA                 TTCCTGGGAAAAAGT  45 36
        galF 1855949 .. 1856000 + -10.1  -4.75518   TGATAAACATAATAA CGGCAGTGAACATTCGAAGCGGC AAGTTG GCTGAAACGAGTGTTGACTGCCG TTTTAGTTTTGTATA  91 68
        rfbB NONE
        rfbD 1858278 .. 1858291 +  -8.1  -4.55287   TCTAATAAATTTAAA               TGCCC ATCA GGGCA                TTTTCTATGAATGAG  82 36
        rfbA NONE
        rfbC NONE
NFH28_RS08895 NONE
        rfbF NONE
        rfbG NONE
        rfbH 1863926 .. 1863942 +  -6.7  -4.43576   GAAGAGTTCTTTGGT              TTGAATT TCT AATTCAA              TTTATTCTATCTGGT  74 14
NFH28_RS08915 1864857 .. 1864877 +  -3.3  -4.28548   AAGAACTACTGAAAC            GGTTATGAG ATT TTCATGATC            TTTTAATAAATAAAT  60 18
NFH28_RS08920 NONE
        rfbV 1867264 .. 1867283 +  -2.2  -3.97636   AAGTTATTATATTGA            GATTAAAT GTAG ATTTAACC             TTTCTGGATTCAGCT  53 45
NFH28_RS08930 NONE
        rfbN NONE
NFH28_RS08940 NONE
        rfbK NONE
NFH28_RS08950 1874046 .. 1874069 +  -9.6  -2.72511   ACTATTCACCTTTAA          CCTGCCATGA CCGT TTGTGGCAGG           GTTTCCACACCTGAC  69 139
        gndA 1875522 .. 1875540 + -11.7  -6.06529   TGCAAAAATGTTTAA             GCCCGGT TTAAT ACCGGGC             TTTTTTTTATCTCTA 100 45
         ugd 1876914 .. 1876933 +   -10  -3.10244   TGATTAATAAGGCAA            TCGGGGCT GATG AGTCCCGA             TGATTTATTGACCAA  73 34
NFH28_RS09015 NONE
NFH28_RS09020 1887440 .. 1887467 +  -9.2  -5.63103   TGCAAAAAATGACAC        TAACCGACGTTT TAAT ACGCGTCGGTTA         TTTTTTTGCTTCAAA 100 127
        yoeI NONE
        plaP 1889010 .. 1889028 +   -16  -5.73978   TCGGCAATAGTAAAA             CCGGAGGC AGT GCCTCCGG             TTTTTTGTTTGTCAT 100 53
        phsA NONE
        phsB NONE
NFH28_RS09065 1897510 .. 1897545 +   -12  -2.99251   CCATAAAATAATGTC    AGCAAGAAAATGTGCC TTGT GTCACATTTTCTTGCA     ATTTATCCATGTTTG  81 47
        dacD NONE
        sbmC NONE
NFH28_RS09080 1900687 .. 1900700 +  -2.3  -3.53012   GGCAACGATTTTATC               CCCGA ACCT TCAGG                TTTCCCCAGACGGCG  47 131
NFH28_RS09085 1901169 .. 1901203 + -10.7  -3.53091   CCGAATAATGCGCTA     CGGCAGTGGGAGCGT ATATC AGGCTCTCACTGCAG     TTTGACCCCGCCAGT  81 33
        pduF 1919370 .. 1919389 + -12.2  -4.47259   CGAACTGATCAAAAC            GTCTCCCA GCAA TGGGAGAC             TTTTGATATTGTCAT 100 113
        pocR 1920796 .. 1920809 +  -8.1  -2.82516   GGGTGAAAATCCCCC               GCAGC CCCC GCTGC                TGTGATGCTGACGAC  60 411
NFH28_RS09205 1922369 .. 1922379 +  -2.4  -3.23715   GCACTGGCTGGCGGC                 GGCG AGG CGCG                 TATTATGACGATTCT  44 7
        cbiB NONE
NFH28_RS09215 NONE
        cbiD NONE
NFH28_RS09225 NONE
NFH28_RS09230 NONE
NFH28_RS09235 NONE
        cbiG NONE
NFH28_RS09245 NONE
NFH28_RS09250 NONE
NFH28_RS09255 NONE
NFH28_RS09260 NONE
        cbiM NONE
NFH28_RS09270 NONE
NFH28_RS09275 NONE
NFH28_RS09280 NONE
NFH28_RS09285 NONE
        cobU NONE
        cobS 1936396 .. 1936413 +  -4.8  -2.76696   AATTGATCTTTCTGC             TGGCTC TGTTAT GAGCCG              ATTATTACGGACGAG  49 12
        cobT NONE
        ldtA 1938495 .. 1938508 +  -2.3  -3.73414   GGTCAACATTAGCGC               GGGCA GGCC TGGCC                TTTAAATATCCTGTC  51 7
NFH28_RS09315 1940534 .. 1940547 +  -2.3  -3.36273   ACAGGCTTTGACAAG               CCAGG GGCA CCTCG                TTAATATTCGCCCCG  45 127
NFH28_RS09320 1940712 .. 1940739 +   -12  -4.62783   AATAAATTATCTTTA        CCCGGTTGACCT GAGA AGGTTTACCGGG         TTTTTGACATCCATG 100 89
NFH28_RS09330 NONE
NFH28_RS09340 1943578 .. 1943613 + -12.6  -2.87146   AAGTGGCTGAATGAA    GCCTTAGCGGGAGGCG GTTC TGTATCCCGTTAAGGC     CTTATTGTGCCGCGG  82 102
NFH28_RS09400 1952996 .. 1953011 +  -6.8  -2.55847   CGCTCGCCATACATA              GTCCTG ATAA CAGGGC               CTTCCTCTCCCCATT  51 386
NFH28_RS09455 1958956 .. 1958974 +  -3.1  -5.81412   ATTGCTGGATCAGCA             TTACCGC CTTTA GCGATAA             TTTTTTTTGCATCCA  95 250
NFH28_RS09470 NONE
NFH28_RS09475 1960848 .. 1960860 +  -4.8  -3.85698   GCATGAACAGTTTAA                CGGT AAATA ACCG                TTTGTCGCAACAACC  59 35
NFH28_RS09480 NONE
NFH28_RS09485 NONE
NFH28_RS09490 NONE
NFH28_RS09495 1963156 .. 1963172 +    -3  -3.02144   CAACGATTCCGGAGG              GATTCA GAGGA TGAGTC              TGTTAGCAAAAGTGC  43 12
NFH28_RS09500 NONE
NFH28_RS09505 NONE
NFH28_RS09510 NONE
NFH28_RS09515 NONE
NFH28_RS09520 NONE
NFH28_RS09525 1967660 .. 1967675 +  -8.2   -5.1417   CGAAATCATAACAAA              CCTCGC TTCG GCGGGG               TTTTTGCTTTTCTGG  87 136
NFH28_RS09530 1967996 .. 1968012 +    -3  -4.41353   AATTCTGCTGCTTCT              TCTGAT ATGTA ATCAGG              TTTTAGTCTGTCTGA  60 64
NFH28_RS09535 NONE
NFH28_RS09540 NONE
NFH28_RS09545 1969348 .. 1969363 +  -2.5  -2.62983   GTCCGATACAACAAG              GC-GCG GGCGG CGCTGC              TGGTATGAAGATGAG  40 2
NFH28_RS09550 NONE
NFH28_RS09555 1969904 .. 1969919 +  -4.8  -3.08187   AGTACAATCTACATT              TGAATA ATAA TATTCA               TTAGGTGAAATATTT  51 6
NFH28_RS09560 NONE
NFH28_RS09565 NONE
NFH28_RS09570 NONE
NFH28_RS09575 1973288 .. 1973300 +  -2.6  -2.79327   CCACATTGAGTCCTA                CGGG ATCCG CTCG                CTTTAACTGAGGTAA  41 7
NFH28_RS09580 NONE
NFH28_RS09585 NONE
NFH28_RS09590 NONE
NFH28_RS09595 1976597 .. 1976616 + -12.1   -2.5294   CGGCGTAATCACTCA            GGGGCGC TGAACT GCGCCCC             CTGTTCTGACGGGTG  79 33
NFH28_RS09600 NONE
NFH28_RS09605 NONE
NFH28_RS09610 NONE
NFH28_RS09615 NONE
NFH28_RS09620 NONE
NFH28_RS09625 NONE
NFH28_RS09630 NONE
NFH28_RS09635 NONE
NFH28_RS09640 NONE
NFH28_RS09645 NONE
NFH28_RS09650 1983458 .. 1983472 +  -8.5  -5.09259   TCGACGACATAGAAG               CCCGC TTAAT GCGGG               TTTTCTTTTGGGGTA  91 52
NFH28_RS09655 NONE
NFH28_RS09660 1985884 .. 1985899 +  -3.2   -3.0263   GAGGAGGCGGATTTC              TGATGG CTAA CCATCC               TCTTCAGAACATGAT  45 23
NFH28_RS09665 NONE
NFH28_RS09670 NONE
NFH28_RS09675 NONE
NFH28_RS09680 NONE
NFH28_RS09685 NONE
NFH28_RS09690 1990811 .. 1990823 +  -4.8  -3.13553   ATTCTTTATTATCCA                GCCA TGCCT TGGC                CTTTATATTCCCTTC  47 213
NFH28_RS09720 NONE
NFH28_RS09725 NONE
NFH28_RS09730 1995039 .. 1995054 +  -3.2  -4.25104   GGTTGCCAAATCATC              CCCGTT CTCT AACCGG               TTTTGGTCGCACAAG  60 64
NFH28_RS09735 NONE
NFH28_RS09740 1995876 .. 1995890 +  -7.1  -5.24129   AAATAATTCATATTA               GCTCC GTACA GGAGC               TTTTTTATGCCCGGA  91 35
        drpB NONE
NFH28_RS09755 NONE
NFH28_RS09760 NONE
NFH28_RS09765 NONE
NFH28_RS09775 2003055 .. 2003067 +  -4.9  -2.78384   CATCCTCGTCTAAGG                TGAAA GCG TTTCA                TCTGATACAGGAGGC  49 70
NFH28_RS09780 2003278 .. 2003297 + -12.8  -4.34402   AGCCCGATGACAAAA            CGCCCGGT TAAT GCCGGGCG             TTTTGCTGTGGAGAA 100 31
        dgcQ 2005499 .. 2005511 +  -4.7  -3.14211   TATCGCGCCAGATCA                GCGAC ACC GACGC                TTCATGCAGACGGGT  47 375
        dsrB 2006896 .. 2006907 +  -4.4  -4.28115   TGTCAGCCGTACTAC                GTGA TAGA TCAC                 TTGTTTATTATGCGT  66 118
        fliE 2019337 .. 2019355 +  -5.4  -3.91792   GACTCCAATAATGGA             GATGAAAA TAA TTTTTATC             ATTTTTTTGGCTTCT  61 478
NFH28_RS09895 2021793 .. 2021803 +  -2.4  -3.30554   GCGTTGCAGAAGAAC                 GTCG CTT CGCC                 TTGATCATTAGTTAC  43 117
NFH28_RS09920 2027273 .. 2027288 + -10.4  -5.26875   GTGGTACACAATCAA              GGCAGC GAAA GCTGCC               TTTTTTAATTCCGGA 100 64
        fliB 2028526 .. 2028549 + -10.2  -4.42974   TGACATAGTTTTGTT          CGGGGTGGGC TTTT GCGCATCCCG           TTTATTGTCTATGGA  87 33
        tnpA 2029238 .. 2029258 + -12.5   -3.8147   AGGCGCATCTGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTCTATCTG 100 106
NFH28_RS09935 NONE
        fliZ NONE
        tcyJ 2031772 .. 2031789 +  -5.5  -5.67283   ATGTCAGCAAACGGA             GGCGCGTG AAT CG-GCGCC             TTTTTTATTTCCGTT 100 95
        dcyD NONE
        tcyL NONE
        yecC 2034470 .. 2034481 +    -3  -3.39327   GTTAATTTAAGTCAT                TCAT AATA ATGA                 TTATCAATATCAAAG  46 215
        sdiA 2035267 .. 2035293 + -12.2   -5.1861   GCGCCAGACGCGAAA         CCGGCTGAAAGC GAT GCTAACAGCCGG         TTTTTTACTACTGGC 100 58
        uvrY NONE
        uvrC NONE
        pgsA 2039070 .. 2039082 +  -4.1   -3.5394   ACGCGGAGATTTGCT                TGATC AGT GATCG                TTTCGCCGCAAATTT  52 16
NFH28_RS09995 NONE
NFH28_RS10000 NONE
NFH28_RS10005 2039575 .. 2039588 +  -8.1  -5.66684   AGCAGTGTCGTGAAA               CCACC TACG GGTGG                TTTTTTTGTGCCTTC 100 70
NFH28_RS10010 2040462 .. 2040473 +  -5.8  -3.63694   GACAAAAACACGCTT                TCCG TTAG CGGA                 TTATTCACAGTCGGT  59 375
NFH28_RS10020 2042324 .. 2042343 +  -6.4  -4.52589   CATGAGTATAATATA            GCGAGAAA CCCA TCTCTCGC             TTTTGTGTGGGGCGA  76 46
NFH28_RS10025 2043233 .. 2043269 + -18.1  -3.66874   CGGCCATAGCGTGAT    GATTATCGAGCCTGGAC GGC GTCCGGGCCCGGTAATC    TTTGCCTGGCGTTAA 100 52
NFH28_RS10035 2045170 .. 2045192 +  -2.8  -3.59867   GTCGGATAATCCTGG          CTGG-TCAT TGCGGC ATGAGCCAG           TTCATTAATTTTTTG  49 237
NFH28_RS10050 2047345 .. 2047364 +  -9.2  -3.23692   GCTTCATCTGCCAGA            CGCGACAG CGTG CTGGCGCG             TTGCTGATAATCCTC  65 400
NFH28_RS10060 2048745 .. 2048763 +  -2.4  -3.61398   ACAGGCTGAACATAT             CTATTATC CCT GGTAATCG             TTATTCACCCAGGGC  49 10
        otsB NONE
        otsA 2051955 .. 2051972 +    -4  -3.55761   TTTCGCCTGAACAGG             GCGGGC GATAGA GACCGC              TTTAGCCAGTAGCTG  51 388
        flhD NONE
        flhC 2053783 .. 2053806 + -15.4  -5.86332   TGGACAAACACTCCA          GCAGCGGTAA GTCA TTACCGCTGC           TTTTTTTTGCCTTGC 100 52
        motA NONE
        motB NONE
        cheA 2057696 .. 2057711 +  -3.2  -2.75064   CCGCGAACAACGTAT              GGCG ATCACAGC CGCC               TGATTGAGTGAGAAG  43 7
        cheW 2058244 .. 2058272 + -23.3  -3.07233   CGTCGCGTAATAACG        TTGCCGGATGGCG TCG CGCCATCCGGCAA        TATTCACCGTTATGC 100 31
         tar 2060236 .. 2060258 +  -6.9  -2.76483   GTAATACGGGAAGCA          TGGCGCTGCC GCAG GGC-GCGCCC           GTTGTACTTTGAATG  55 125
        cheR NONE
        cheB NONE
        cheY NONE
        cheZ 2063317 .. 2063348 + -13.1  -3.10493   GAATCCGTCAACCCG      GCCGGATACGAGA CTTTCT TATCGTATCCGGC       TATCTCTATTAACGC  86 78
        flhB NONE
        flhA NONE
        flhe 2067087 .. 2067105 +  -4.5  -3.56042   ACCGCCCCTTTCTTT             GCCAGGT AGCAG ACCTGAC             TCTCTTTTTGAATAA  54 40
NFH28_RS10160 2068579 .. 2068604 + -10.3  -4.09685   TTCGCATGATGGGTG         CGGCGGTAACG CCGT CGCTTCCGCCG          TTTTCCAGAATCAAG  86 156
NFH28_RS10175 NONE
        cutC 2073915 .. 2073939 +   -10  -5.71983   TGCTTGCTCGTACCA          GGCCCCTG CCAATTCAA CAGGGGCC          TTTTTTTCTCCTTCA 100 73
        aspS NONE
        nudB 2080326 .. 2080346 +  -3.2  -5.40474   AAGAGTTTGTCATTA           ACGTCGCCT GAAA AGGCG-CGC            TTTTTTTGAGGAAAT  81 15
NFH28_RS10220 NONE
        ruvC 2081672 .. 2081694 +  -7.7  -3.75153   TGCGCTAAATCATTC           TCCCTCAGC CTCGC GTTGAGGGG           TTTCAATTCCACAGG  71 33
        ruvA NONE
        ruvB 2085854 .. 2085872 +  -3.8  -3.21934   CGCCTGAAGTCGCTG             CGCTCA TCAGACC TGGGCG             ATTTTGTAGGCCCGG  48 41
        znuA NONE
        mepM 2089829 .. 2089851 + -13.4   -5.8901   AAATGCGCTGACAGA           GCCGGTACGC GAT GTGTGCCGGC           TTTTTTGTTTTGTGT 100 42
        lpxM 2090906 .. 2090923 + -11.3  -3.96148   CATCAAATAAATAAA             GCCTCTC GTAA GAGAGGC              TTTATGCTGACAAAC  91 31
         zwf 2095305 .. 2095330 +  -5.4  -5.80364   TTTTTGCACTTTTAA         GCCTCGTGTGG ATTCA CC-TGCGAGGC         TTTTTTTATTACACT 100 105
         edd NONE
        kdgA 2098022 .. 2098054 + -11.4  -3.08046   GTCTGATAAAAATGC     GCTAACGTCGCCATC AGGC GATGGCG-CATTAGC      CTTTTACCGTCACGC  79 97
        yebG 2099661 .. 2099671 +  -4.6  -4.41206   CTGAACCCACACTTG                 CGCT CCC GGCG                 TTTTGTACCATGCTT  66 37
NFH28_RS10310 2100073 .. 2100085 +  -5.5  -4.17048   TAAGCCCCGCTAGCA                GCGTA ATT TGCGC                TTCTTTTGCCGGAAC  67 28
NFH28_RS10315 2100849 .. 2100863 +  -5.6  -3.39908   TTAAGTAACATGTTT               CGCTTG CAT CATGCG               TGTCTTTTGCCACCC  56 51
        ptrB 2103095 .. 2103121 +  -8.7  -3.89291   GCGCATAGACGCGCG        CCCGCAACGGCT TGTG AGC-GTCGCGGG         TTATTGTGGTGTTCC  76 33
        yobA NONE
        copD NONE
NFH28_RS10350 2106615 .. 2106642 +  -8.5  -5.76633   ATTTTTAATAAAAAA        CCGTAAACCTT CACGAA AAGGCTTACGG         TTTTTTTATCTCTGA 100 44
NFH28_RS10370 2109729 .. 2109740 +  -4.4  -3.85817   ATCAAGGCACTCATC                TTCC ATCA GGAA                 TTTCTGCGACCACAT  58 369
NFH28_RS10455 2119919 .. 2119931 +  -6.3  -2.79915   ATTTGAATACCCATA                GCTTT ATG AAAGC                TGTAATCAGGTAGCT  53 50
       sopE2 2122961 .. 2122992 +  -6.6  -4.75288   CTATATATTCGTTTT      TATGGCGACGCTTT TAAC AAAACGTCGTCATC       TTTATTTTAATATAA  80 98
NFH28_RS10475 2123373 .. 2123422 + -19.4  -4.66318   GAACAGGCGATAGTG AGTAGCTCGCTGCGCCAGGGGA TAACCC TCCCCTGGCGCAGCCAGTTATA TTTTATTGCGATGAT 100 61
        pphA 2124505 .. 2124520 +    -6  -4.44608   AGGAAGAATAAATAA              CCCGCC TGGC GACGGG               TTCTTTTTGAGTCAG  76 319
NFH28_RS10510 2130942 .. 2130961 + -12.2  -3.15996   GTAGCAATTACTGAT            GGCGTCAT TATA ATGACGCC             TGTTCATGCCTGCTG  83 53
        proQ NONE
         prc 2133774 .. 2133795 + -13.1  -6.06723   ATAAGTAACGCTAAA           CAGGCACAA AAAA TTGTGCCTG            TTTTTTTTTAACAAG 100 33
        htpX 2134866 .. 2134883 + -12.7  -5.42259   TGGCAAGTATGAAAA             GCGCGTC GAAT GACGCGC              TTTTTTTACGCCTGA 100 50
        kdgR 2137260 .. 2137282 +  -9.9    -5.626   TGACGTTAAAAAAAA           GCAGCTACG AAAAA TGTAGCTGC           TTTTTTTATAACATC 100 56
        mgrB NONE
NFH28_RS10550 2138626 .. 2138639 +  -3.9  -4.88288   ACAAAAAGCGGTGCC               GAAAA TCGC TTTTC                TTTTCTATTATTTTG  71 312
NFH28_RS10555 NONE
        cspE 2139402 .. 2139420 + -12.4  -4.89009   AGCCTCAGATATAAA             GCCTCGCT AAA AGCGGGGC             TTTTTAATTCAATAT 100 74
        ftsI 2141331 .. 2141358 +    -7  -3.53224   TAAAGGATTTTCCCG        GGGCGCAATT CGCGTTAC ACTTGCGCCC         TTTAGCGCCCCAGTC  62 38
        rlmA 2142203 .. 2142226 + -10.4   -2.5655   CGTTAACCGTGAAAA          T-GCGTCCAGA GGA TCTGGACGCCA          ATTCCTATCAGTACG  70 35
        yoaE 2148449 .. 2148501 + -12.5  -3.09635   ATCGCGGACATAATC TGTCCGTTATGCCGGGCGGGCGGCG GCG CGCTGCCCGCCAGCCACTGTGGAAA TTCGCTAATGGGCAT  81 75
NFH28_RS10625 2154178 .. 2154188 +  -2.4  -4.56597   AGAATACGTGACTTA                 CTGG AGC CCTG                 TTTTTCCAGCACCGC  65 209
NFH28_RS10635 NONE
        tsaB NONE
NFH28_RS10645 2157813 .. 2157837 + -14.4  -2.56596   GTTTTATCAATAAAA          GAAACAGCGG CTGGT CCGCTGTTTC          TGCATTCATAGAGAC  87 47
        fadD 2159705 .. 2159721 + -11.5  -5.75342   TCAGCTAACGAGAGA              CGCCGGT TAA GCCGGCG              TTTTTTTTGGCGCGA 100 49
         rnd 2160954 .. 2160969 +    -9  -5.14563   TAAAAAAATAAAAAA              GGCAGA TTCT TCTGCC               TTTTTTAATCCAGGA  93 98
NFH28_RS10675 2163245 .. 2163255 +  -8.2  -2.55544   CGTTAAACGGTATTC                 GGCG CCG CGCC                 TGAATTCCATCATGA  59 35
NFH28_RS10680 NONE
NFH28_RS10685 2164488 .. 2164503 +  -2.5  -3.98291   GGGCAGAATAAGTCT              TCGGC AAAACG GCTGA               TTGTTTACAATTCTT  54 30
NFH28_RS10690 2165005 .. 2165021 + -10.1  -5.17054   CAACCGCCTGATGCA              CCGTCTG TGC CAGGCGG              TTTTTTACATCTTCT  93 58
NFH28_RS10695 2165837 .. 2165852 + -10.4  -2.98823   TTCGGGCAAAAAAAA              CGCTCC CGAA GGAGCG               TGTGTATCAACGACC  73 525
        fadR 2169298 .. 2169309 +  -4.4  -4.27617   ATTGCTCAGGTTATA                CTGT GACG ACAG                 TTTTGATCGAATCTC  66 309
NFH28_RS10725 NONE
        dadX 2173340 .. 2173360 +  -3.9  -3.90241   GTCCACTTGGGGGCG            GGTCGAC GTTGCCA GGCGACC            TTATTCTGCTTCGTC  57 67
        emtA 2176968 .. 2177025 + -10.7  -3.14257   ATAATCCGCTGCAAC TC-CCGCTCCACCGCC-GGGCTAACGTT AAGGA AACGAAAGCTCAGGCGG-GGAGTGGTGA TCGTTTCATTTTTCC  69 106
NFH28_RS10755 2178078 .. 2178105 + -14.2  -2.62184   TGCAGAACGTGTAAG        CGTTGACCCGGT CAGC ACCGGGTCAACC         TACTATAAACACGCG  87 45
NFH28_RS10815 2191914 .. 2191931 + -11.3  -4.53707   TTATGAAATAAAAAA             TCCACGC GGCT GCGTGGA              TTTTATGACTTTCTT 100 104
        ychH 2194350 .. 2194376 + -10.1  -2.65388   AGCTAACCGGTTCAG        GCCCGGTAAGCG TTAT CGCC-ACCGGGC         ATTGTCCATTAACTG  70 35
        hemA 2200468 .. 2200480 +  -2.7  -3.59262   CACACACCACACTTT                TTTAC AGG GTGAA                TTTACGCCTATGAAG  50 44
        prfA NONE
        prmC 2202381 .. 2202391 +  -2.4  -3.05597   TGGTAATGAACGCGT                 GACC TGC GGAC                 GTTTTACGCCATGAC  42 1
       sirB2 NONE
       sirB1 NONE
        kdsA 2204519 .. 2204540 + -10.2  -5.36441   TTTTAGCTTGTGTAG           GCCGGATA AGATAC TATCCGGC            TTTTTTATATCAGGC 100 48
        chaB 2206589 .. 2206603 +  -2.8  -4.37886   TTTGCATGGATAACC               CTTCTC CTT GAGAAA               TTTTGTCGGCAATGG  60 467
NFH28_RS10900 2208353 .. 2208367 +  -5.7  -3.19192   CTTCAGAATATCGCG               CTCAC GCGGG GTGAG               TTGCGTTACATCGCG  54 197
        narK 2212376 .. 2212394 +  -8.8  -6.06529   TTTTGATTATCCTTT             GCGCGG CGTTAGA CCGCGC             TTTTTTTTATCTGTA 100 42
NFH28_RS10920 NONE
        narH NONE
        narJ NONE
        narI 2219427 .. 2219442 + -10.4  -5.65177   TCTCGATGCCCTAAA              CTCCGC TTCG GCGGAG               TTTTTTTATGGCTGT 100 46
NFH28_RS10940 2221312 .. 2221330 +  -8.8  -3.92373   GCTTCGCCCTTCGGG             TCGTTGCC TGC GGCAACGC             TTTCTCGCTGCGCTC  76 160
        rssA 2224903 .. 2224920 +  -2.6  -3.23853   TTCTGACAGGCGCAA             GCGGCA ATACCA TGCCAC              TATTGATTAAAGCCA  45 68
        rssB 2226022 .. 2226032 +  -5.4   -4.0056   CGACGAGTGTTACTA                 TCTG CGG CAGA                 TTTATAAGTATTTGT  63 83
        galU 2227103 .. 2227121 +  -9.5  -5.64274   AATTTTTTAACAGAA             GCGCTGG TAAAT CCGGCGC             TTTTTTTATGCCTGG 100 53
         tdk 2229051 .. 2229068 + -12.7  -3.85864   GGTAAAACAAAAAAA             CGGCCTC AATT GAGGCCG              TTATTGTCATGCTAA 100 176
NFH28_RS11020 2232921 .. 2232942 + -13.7  -3.36492   ACCTGCTGATTTACA           GGCGGCGCCC TAA GGG-GCCGCC           TTGTGACATTCCCAC 100 47
        oppA 2235304 .. 2235329 + -16.3  -2.80583   ACATTAATGGCAAGA         CATGGGACAAC TGCG GTTGTCCCATG          GTGTCTTTTTTCATC 100 34
        oppB NONE
        oppC NONE
NFH28_RS11040 NONE
        oppF 2239287 .. 2239307 + -12.6  -4.21812   CCGTTATAATCGCAA            GGGCTGAC AATTC GTCAGCCC            TTCTTTTAGGTGAGG 100 32
NFH28_RS11050 2240504 .. 2240521 +  -3.4   -3.6579   GCCTGCTCAAGCGTT             TCGTCT TCAGTC AGGCGA              TTGTTCAGATCCATT  51 365
NFH28_RS11065 2242556 .. 2242576 +    -9  -3.21595   GATCGTTACTGTCCA           CTGC-GGGC ATCG GCCCGGCAG            TTAATAATCGCCCTT  65 230
        tonB 2243936 .. 2243964 + -10.3  -2.54504   ATGTCATTCCTTCCA        CGCGTACGGTT ACAACCC GACCGTGCGCG        ATCTCTTTGGCCAGT  65 312
        ompW 2247314 .. 2247326 +  -9.1  -2.56271   GCTACCTCGCGGATC                GTCGC CTT GCGAC                ATGTTGTAGTACACG  59 323
         rnm NONE
NFH28_RS11160 2258164 .. 2258179 + -11.8  -2.69188   ACGCGGCCTTAAAAT              GGCGCG GCAA CGCGCC               GTTCATTCTCCTGTT  79 60
        rluB 2259146 .. 2259175 + -10.8  -3.14931   GATCATCAGACAAGA       GG-GTTTGTGCCG GATGG CGGCGCAAACGCC       TTAATCCGGCCTACG  78 66
        sohB 2261833 .. 2261861 + -16.1  -2.56596   GATGTAAACCGCTAT        TGCCGGATGGC ATTCAGC GCCATCCGGCA        TGGATTAATCAACCA 100 34
        topA 2265146 .. 2265163 + -14.1  -5.37043   TCACTATAGTCAAGC             GGGCCGC GTAA GCGGCCC              TTTTTTATATCCCCT 100 54
        cysB 2266646 .. 2266657 +    -3  -4.20516   AATAGTTATCTTGAG                TCAA AAGA TTGA                 TTTATTCACTGGCAA  58 169
NFH28_RS11200 NONE
NFH28_RS11205 2267159 .. 2267177 +  -5.3  -3.33815   ACCGCAGCAACCGTG             TGCTGAG CGCCT CTCAGTA             TTGATTAAACACAGT  54 90
NFH28_RS11210 2267307 .. 2267332 +  -9.1  -4.88228   TCTAATCTCGTCAAA         GCCCGATAA TGCGTTAT TTATCGGGC          TTTTTCATCTTCGCT  90 36
        acnA 2270163 .. 2270193 +  -9.6  -2.84051   GAACTAAAGCCGTTT       ATCGGGCCTGCC GTAAACA GGCAGGCCCGCG       CTTTAATACCGGTGG  70 34
        pgpB 2271812 .. 2271843 +  -5.2  -3.54543   CTGATGGTGGGCGCA      TTTCCA-TTTCGCGC GAG GCGGGAAAATGGTAA      TTTAGAAGGCTGGAT  56 77
NFH28_RS11230 NONE
        lapB 2273476 .. 2273503 +  -2.8  -3.64703   ATCGGCGACCAGGGC        TTATCAGGTT GTCAATCG AACCTGTTAA         TTTCCCTGCGCCGCA  50 107
        pyrF NONE
        yciH 2275103 .. 2275113 +  -5.4  -3.50555   GGGTATATCACGCAG                 GTGA TAG TCAC                 TTCCTGTTATTTCGC  57 480
        steC 2285130 .. 2285153 +  -2.4  -5.20534   ATATATTGTTTTTTT          CGATCATTTT TTAT ATATTGATCG           TTTTTATTGATTGAT  74 403
NFH28_RS11300 2286254 .. 2286280 +  -7.8  -3.85698   TTTAGGGCGTAAAAT         CAGCGCGCGGGC CAG GCCCAGACGCTG         TTTCTGCCCCGGCGC  68 353
        pspA 2293175 .. 2293200 +  -3.1  -3.70902   AATGACAATGGCGGC         GCCGATACGCG CCGT CGCTCATCAGC          TTTAGGTGTAAGGAG  51 39
        pspB NONE
        pspC NONE
        pspD NONE
        pspE 2294467 .. 2294483 + -10.8  -3.80018   TACTCATACTAACCG              CGGCGC TTAAT GCGCCG              TTGTTGATCTCTCCG  85 57
NFH28_RS11360 NONE
NFH28_RS11365 2297050 .. 2297082 +   -12  -2.60508   AATGACCTTTCACAT     GGCGCTGACGGCCTG GCTT TACGCCG-CAGCGCC      CGTTTTTCCGCCATG  79 36
        tyrR 2298736 .. 2298759 + -12.5  -3.28712   AAGAGTAGAAAACAA          GAAGGCCTC CGGATA GAGGCCTTC           TTGTGACAAAAGAGC  90 33
        ycjG 2300652 .. 2300696 +  -2.8  -3.69354   CGTGAAAAGAGACGA CCCAGGCGGGTTG-GAGTCGA TGAA TTAACTGGCAAAGCGCCTGGG TTTCCGGTTCTGAGC  51 272
NFH28_RS11390 2302986 .. 2303004 +  -2.3  -3.55889   GGCATGGGGATTAAG            CGAGCGCC TGAT GCCGC-CG             TTCTCATTGCTGTGT  47 100
NFH28_RS11400 2305206 .. 2305228 +  -2.6  -3.60805   TTTGCTCTTATCATG           GCGTCTTTAC GAC GAAAGGGTGC           TTTAGCGTGGAATAT  50 270
NFH28_RS11405 2306147 .. 2306177 + -14.1  -2.75074   ATGAACAGCTTCTAA       CACGGTTGCCG GAGCGTAGA CGGCAACCGTG       TGATATTCGCCTGGC  87 68
NFH28_RS11415 2307648 .. 2307660 +  -5.5  -3.06915   CCTAATCATCCATCT                TGCCG TTG CGGTA                TTCGGTAAAGTACAT  52 97
NFH28_RS11420 2307970 .. 2307988 +  -5.2  -3.87994   TTGGGAGGCCGTGTC             CAGTATGG GTA CCGGACTG             TTTCTGGGCCTGAAT  61 54
        zirU 2311642 .. 2311654 +  -5.5  -3.29511   GAATAAACGCGCTAT                CCGTC GCT GATGG                TTATCGCCAAATAAA  56 16
        zirT NONE
        zirS 2314574 .. 2314588 +  -2.2  -4.52873   AAACTATATTAATTA               TTATGT CTA ATATAA               TTCTTTTTATCACCA  61 40
NFH28_RS11450 2315288 .. 2315299 +  -4.4  -3.91597   GCAGGCATTCTCTTG                TGTG CCCT CACA                 TTTAATATATATACT  59 98
NFH28_RS11465 2317061 .. 2317102 + -13.1  -5.18371   CGCCATCCGGACAGG GAAGCCTCGGTGCCCGATAA CAC TTATCGGGCACCG-GCTATC TTTTATTTTGTCGCA 100 67
NFH28_RS11475 2318761 .. 2318771 +  -6.8  -3.04248   GGTCGCAGCGCAGAT                 GGTC AAT GACC                 TGTTCGGCCGTGTTC  54 157
        smrA 2322104 .. 2322117 +  -2.3  -4.44245   ACCGCCAGCGCAAGC               TCGCG CGAA CCCGA                TTTTATGCCTGATAT  59 63
NFH28_RS11500 2323649 .. 2323667 +  -7.4  -5.03145   ATACATGTTTGGTAA             GCGCCT GTTGCTA AGGCGC             TTTTTTCGCACGTTC  86 43
        zntB 2324950 .. 2324969 +  -9.3  -5.83822   ATTGATTCGTACGAC            GCCGACT TAGATT AGTCGGC             TTTTTTTTGCCTGTA 100 215
        dbpA 2326625 .. 2326662 + -13.5  -3.00106   TATTAAAATGATCGA   TAGCATGGCGTCTCAGCG GAG TGCTGAGACGCC-TGCAG   ATTATTTCACTTCGA  87 30
NFH28_RS11525 2328309 .. 2328338 +  -9.3  -2.62613   GCGATGATGATTGAT       TTGAGCCCGCA CTCTCTTA TGCGGGCTCGG        GTATTTAGCGTACCA  66 41
NFH28_RS11545 2333636 .. 2333649 +  -3.7  -4.24002   GCCAAAGCTGAGCTC               CGGGC CGGT GACCG                TTTTACCGTTTACGC  64 336
NFH28_RS11560 NONE
NFH28_RS11565 NONE
NFH28_RS11570 2338335 .. 2338347 +  -6.3  -3.75153   TGGGTAATTTCTGAA                TACGA AGG TCGTA                TTTACATTAGGCGAA  64 83
NFH28_RS11575 2339045 .. 2339072 +  -5.6  -3.60792   TGTCTTTATGGATAC       CGCCGCGGCTGG AGAGAA CCA-CCGCG-CG        TTTACCGGTTACCAG  55 201
        hrpA 2343582 .. 2343593 +  -3.6  -3.53811   CGGCCTAAAAAGCCA                GGCG ACGA CGTC                 TTTCAAAGCGATCCG  50 33
NFH28_RS11590 2344483 .. 2344499 +  -2.3  -4.06687   AAGTGCGACCACCAT              TTCATAA ATT TGATGAA              TTATTTATAAAAGCT  55 70
        cybB 2345366 .. 2345403 +  -6.9  -3.14931   TGTACTTACGATGAG   CGTGGCGTAGTGGCG GAAAATAG CGCAACGGCGCCATG    TTGCTCCAAAGTCAC  59 306
NFH28_RS11630 2352687 .. 2352702 +  -5.4  -3.84514   TTAGTTTTTAACAGG              GCATTG TGAG CGATGC               TTTCATCCTTAAGCT  61 444
NFH28_RS11640 2355079 .. 2355093 +  -5.6  -3.07622   TAGTAACCTATAACA               GGCCTC CCT GAGGCA               TTGGCTAGCATCTGT  50 347
NFH28_RS11650 NONE
NFH28_RS11655 2357241 .. 2357265 + -15.7   -4.5538   CGATAACTGATTCAT          CCGCCAGCGGA TTT TCCGCTGGCGC          TTTTCTGAATTTTCT 100 31
NFH28_RS11660 2359037 .. 2359068 + -16.6  -4.30719   TCCTTTAGTAAGCGT      CGCGCCAGCGGGCTA TTT TAGCC-GCGGGCGCG      TTTATTCTCCGACAG 100 33
NFH28_RS11670 2361659 .. 2361677 +  -3.8  -2.62184   CTTTAAAAGCGGTAA             GCTTCACA GGC TGTGAGGA             TACTGTAAAAGGAAG  44 35
NFH28_RS11675 2363246 .. 2363258 +  -5.5  -3.79906   GCGTGAGGTTTACAT                CCGAT TCG GTCGG                TTCTTATCGACATAA  61 65
NFH28_RS11680 2365067 .. 2365077 +  -3.2  -3.25356   CGTTATGTCGACGAT                 CGTA TCA TGCG                 TTAGTCAGTTTGCCT  46 11
NFH28_RS11685 NONE
NFH28_RS11690 2367073 .. 2367093 + -15.5   -4.4084   CCCCAGTAATATAAA            GGTCGGGTA CTA TACCCGACC            TTTTCCTGTATGATT 100 32
        rimL 2374238 .. 2374249 +  -4.4  -4.25681   GCAGTCACAGATCCA                GACA TTAT TGTC                 TTTGTTGCCTTCGAT  66 397
        tehA NONE
        tehB 2376570 .. 2376581 +  -3.6  -3.95873   AGTTCTGTAAGTCTC                GCTG CGTT CGGC                 ATTTTTTTGTCGGGC  55 49
NFH28_RS11755 2377718 .. 2377773 +  -3.9  -3.55444   AAGTAAATAAAAAAC GCCTGCGGCGGCG-GCCGCTAACCAGCG ACG CGTTGGATCGGGGTGCGC-GTC-CGGGC TTTGACAAATGGCGG  51 373
NFH28_RS11765 2379234 .. 2379245 +    -3  -2.72211   CACGTGATTAAGCGG                GAAA ACTA TTTC                 GTTAGTTTGCGCTTC  41 30
NFH28_RS11770 2381688 .. 2381702 +    -5   -3.2789   CCATAGTAAATCCAT               TATTCC CTG GGAGTA               TATATTTAAAGTTAT  54 441
NFH28_RS11785 2383667 .. 2383682 +    -6  -3.15996   CACGCCCGTGATCCG              CCGCTG CAAC CTGCGG               TCTTACTGAATAATG  57 30
NFH28_RS11790 2384116 .. 2384126 +  -8.2  -2.86391   TAACCATCTGTTTAA                 GCGG TGT CCGC                 TAATCTTTACCTGCT  61 216
NFH28_RS11795 2385011 .. 2385028 +  -3.5  -4.10161   AAAGCACCATAACAG             TTAGCAA ATCA TTGTTAA              TTTTAACAACTGATA  57 82
        ycdR 2386554 .. 2386584 +  -6.1  -3.53855   CCTGACTAAATTTCC      CGAGTGTGCCGGGT GAGC ATCTGGCGCGC-CG       TCTATTTTTAGGAAA  60 65
        patD 2388457 .. 2388468 +  -3.6  -2.63479   TTTTTTCCTCTGGTT                GGCG TGGA TGCC                 TGATATGACCCTCTT  42 408
NFH28_RS11815 2388649 .. 2388677 +  -5.2  -4.57073   TTCGCTTTTCTGACC        TCAAGCCCGATA CAGGT TACCGGGCATGG        TTTTTCCGCCAGGTC  71 28
NFH28_RS11835 2396056 .. 2396069 +  -4.5  -3.14051   TGGTTCATCAGCAGG               CGTCCG GCG CGG-CG               TGTTCATCAAGCTGG  50 487
NFH28_RS11850 2398084 .. 2398104 +  -7.6     -2.55   CTTTTTTACAATTAA            GTTCCGAA ACTTC TTCGGGAC            TCGATTGCGATGTTG  57 297
        mcbR 2398839 .. 2398853 + -12.8  -3.04515   TATGACTTATCAATA               GCGGGG ATT CCCCGC               TATTGCCGGATATTT  83 53
NFH28_RS11865 2402331 .. 2402352 + -10.1  -2.80821   CTCTGTAAATAGGGT           ATGGAGGGG GAAA CCCCTCCAG            TCATCTCTTTAAACG  71 33
NFH28_RS11870 2402697 .. 2402707 +  -2.4  -3.01712   CTGACTAAGCATTGG                 GCGC GAT GCGG                 TGTTGGCGGCAACGC  42 33
        steA 2405558 .. 2405572 +  -5.7  -4.79949   ACGTACCTCCGGCGC               GACAG CCGGC CTGTC               TTATTTTTTTCAAAA  76 179
        nhoA 2406611 .. 2406641 +    -6  -3.30441   AAACAGAATGACCGC       CTGGCCGGAGATGG TGA CGTTTTCCGGCTGG       TTATCGCGAATGGTG  54 103
        smvA 2418557 .. 2418571 +  -4.2  -2.82742   CAACGACCAGTGAAC               GTCTGC ACG GCATAC               TCCTTATGACCGAGT  45 483
        fdnG NONE
        fdxH NONE
        fdnI 2426035 .. 2426060 + -14.1  -4.38171   TCGCAATCTGATAAA         CAAGGCGCTAT CCTG GTAGCGCCTTG          TTTTCATCTGCTGTC 100 46
NFH28_RS11980 2430786 .. 2430806 + -13.3  -3.27951   CTATCACCTCAACGC            GCCGTAGAC CAC GTCTGCGGC            TATTGTCGTGGCCTA  95 139
        hdeB 2431371 .. 2431388 +  -6.2  -4.53036   AAACTGATATCAAAA             CCCGGC CTGTGT GTCGGG              TTTTACTATTTGTGA  76 45
NFH28_RS11990 2432350 .. 2432360 +    -4  -2.97158   CGTAAAGATTAGCCC                 CATA GTC TATG                 CTTGTTCTTCGGATG  46 96
        treZ NONE
        treY NONE
        glgX 2438875 .. 2438891 + -10.8  -5.14965   GCGCTCCGGACCCAA              CCGGCC TTGAT GGCCGG              TTTTTTACTGGCGCT 100 51
NFH28_RS12025 2444713 .. 2444725 +  -2.7  -4.19472   TTCCCCGGTTGCTGC                TTTGA CCG TCAGA                TTTTCCAGTGTATTG  58 234
NFH28_RS12050 2448050 .. 2448064 +  -4.2   -3.3334   GAACGCGTCATTGAG               GTCAAC ATT GATGAC               TTATAAGCTGGCATT  50 5
NFH28_RS12055 2448456 .. 2448470 +  -2.8  -4.63218   CTATGGCCTACGTTG               TGTATG TGA CATTCA               TTTTATTCCCGCCCG  65 137
NFH28_RS12060 2448918 .. 2448949 + -12.6  -4.72497   GATGCTTATTCTCGG      TAAAACCGGTAGCAT TAT ATG-TACCGGTTTTA      TTTTATTCATCCCTG 100 39
NFH28_RS12075 NONE
NFH28_RS12080 NONE
NFH28_RS12085 2455123 .. 2455134 +    -3  -3.17956   AAACGATAGCTCCGA                TTGA ATTT TCAA                 TTAATCAACTGATTT  45 22
NFH28_RS12090 NONE
NFH28_RS12095 2457604 .. 2457631 + -17.1  -3.71848   ATTTACGGCAAGCTC        CACCGCATGGC ATGACC GCCATGCGGTG         TTATTCATCGACAAA 100 40
NFH28_RS12110 NONE
NFH28_RS12115 NONE
        cybH NONE
        hybD NONE
        hypC NONE
NFH28_RS12135 NONE
NFH28_RS12140 NONE
NFH28_RS12145 NONE
        hypA 2467428 .. 2467441 +  -6.7  -4.11751   TCTGTATTAGGATTC               GATGG GTTG CCATC                TTTTAGCAGATTGAT  70 218
NFH28_RS12160 2469771 .. 2469797 +    -8  -3.06183   TTTGCTATTCAGGTT         ATGGCGCAGA TGAACAT TCTGCGCCAG         TTAAGTCGAGCTCAG  62 43
NFH28_RS12185 NONE
NFH28_RS12190 2476415 .. 2476429 +  -4.2  -3.40403   TTGCTTTTCGCTTCC               GGCG ACTCATG CGCC               TTCTGCTGCGGGAAA  51 433
        marR NONE
        marA NONE
        marB 2478066 .. 2478084 + -12.4  -5.52986   CACCTTTAACCTCTT             TGCCCCGT TTT GCGGGGCA             TTTTTTTAGTACCGT 100 32
        ydeE 2480478 .. 2480491 +  -3.8  -3.49618   ATTACCCCTACGCAA               CAGG CTATTA CCTG                TTAATTATCTGCAGC  52 8
        mgtS 2480864 .. 2480898 + -16.5  -4.55287   TAATCCCTCGCAGAG    CCGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCGC     TTTTGTCTGGATGGC 100 51
NFH28_RS12235 2482678 .. 2482696 +  -5.2  -5.03145   ATTTCCGTCCACCAC             TGTGGCTA TTT TGGCCACC             TTTTTTACCCGCTTC  82 171
        ydfG NONE
NFH28_RS12255 2486939 .. 2486949 +  -4.6  -3.41126   CCCCTTTAACGTCGG                 GGTG AGA CGCC                 TTCTCCGCTTTCTCA  52 42
        ydfZ 2487339 .. 2487361 + -17.8  -3.10513   AACCGCTCCGGCCTT           CCCGGTAGCA TAA TGCTACCGGG           TCTCTGTTACGCTAT 100 58
NFH28_RS12290 NONE
        speG 2494200 .. 2494236 +  -7.3  -2.88023   CCACCGCGCAGTAAG   CGCGGCGCGGTAGTCAC GGAGA GTCGC-ACCGCGCC-CG   GTTTAGTAGTAATCG  59 27
NFH28_RS12305 2495406 .. 2495418 +  -6.3  -3.14132   AACGCTCTTTGACAT                GGATT AAT AATCC                TTACTCCCAAAGGGG  57 70
NFH28_RS12310 2497959 .. 2497974 +  -3.2  -4.56597   CGAAAAAATCTAAGC              CG-CCTG CTC CGGGACG              TTTTTACGCGCCCGG  64 28
NFH28_RS12315 NONE
        dmsB NONE
NFH28_RS12325 2501985 .. 2502002 + -12.7  -2.78349   CAGGTTAATTTATGC             GTGCGGG GCGA CCCGCAC              CTTTCGGGATTGTTT  82 33
        dmsD 2502646 .. 2502663 +  -8.4    -4.614   TTAATCCCCACAAAA             GGCAGG ATTTTA CCTGCC              TTTTCTCTCATTGCG  89 37
        osmY NONE
        osmX NONE
        osmW NONE
        osmV 2506391 .. 2506419 + -14.6  -3.04443   AAACAGCTAACGTTG        CCGCCGGATAGC CTCTC GCTATCCGGCAG        TATCATTATTGTACG  89 31
        clcB 2508206 .. 2508217 +  -2.2   -4.4846   TTATAGGACAGCTAT                GC-GC GAC GCTGC                TTTCTTCTTCGCTTA  62 421
NFH28_RS12375 2512217 .. 2512249 + -11.3  -2.90496   GCCTGAAAAGAAATA      ATCCGGCGATAGC AACGTGC GCTATCGCCGGGC      TGGTTTCACGCCACG  78 35
         asr 2512865 .. 2512883 +  -8.1  -4.57569   AGTCGTAACATGCTG            C-GGCGCG CCCC CGCGCCCG             TTTTTACGGCGCTAA  82 40
NFH28_RS12390 2513949 .. 2513974 + -10.4  -2.62263   GGATTAATGCGGGAA         TCGCTGCCTG AACCAA CCGGCAGCGA          TCGTCTCAGGCAAAT  70 34
NFH28_RS12405 2516167 .. 2516198 +  -6.4  -3.91897   GGCAAGGGAAGAAAT      CCCCGGGAGCATAG ATAA CGATGTGACCGGGG       TTTCTGAGTGCAGCC  66 82
        ydgH 2520721 .. 2520732 +  -5.8  -3.30124   TTCTCGCCGGATGGC                GGCA TACC TGCC                 TTATCAGGCCTACAC  56 62
NFH28_RS12430 2522729 .. 2522744 +  -6.8  -3.73224   TCAATACGACGACCA              GC-GCCC CCA GGGCAGC              TTTAATCACGAGTCC  62 389
        rstA 2523659 .. 2523681 +  -9.1  -3.01712   CTTTATCAAGTCATA           GTGGCGATG CTCAT CACCGCCAC           TGTTCAAAAAACAGA  68 64
        ompC 2525255 .. 2525273 + -17.4  -5.45813   ATTAATTCTTCTCAA             GCCCGCCG TTT CGGCGGGC             TTTTCTTTTTTCATC 100 47
NFH28_RS12450 2527127 .. 2527175 +  -5.2  -2.75826   GCCTGCTTTTATAAC CCACCAGCG-GCGCTGACGGGAA ATCT TTTTCGTCAGCGCGCGATAGAGC TAATGTATTGAGATC  49 60
        rstB 2528546 .. 2528556 +    -4  -3.36327   GGGAACTGTGCTATA                 CATA TAG TATG                 TTGTAACTAAAGTGA  50 67
         tus 2529592 .. 2529616 +  -8.5  -4.07535   GGTATCCTAATGCCA          CGGCTGAGGCT TTG AGCGTCAGCCC          TTCTTTATGCGCCTT  77 108
        manA 2534156 .. 2534177 +   -13  -4.38116   AGACGTAAAACTCCT           CCAGGCGG TTTAAT CCGCCTGG            TTTCATTTTTATGGA 100 83
NFH28_RS12480 2535742 .. 2535765 +  -5.2  -3.12352   GCGACGCTGCACCCG          GTCTGCGC CGAACGAC GCGCAGCC           TCTACTTTTGCGTTA  51 58
         add 2537489 .. 2537524 +  -7.6  -3.06133   GAGAAATGCGACATC    TCAGGCAAGACACAGCG TCG CGCGATGTTTTGCC-GA    TTCCATGCCCAGTTC  60 100
         blr 2539069 .. 2539096 +  -6.2   -5.3472   ATATTCCCTTTTTAC        CTGCACCCCTGA CCTC TCACTGGTGCGG         TTTTGTTTATTTTTT  91 232
        ydgT NONE
NFH28_RS12515 NONE
        rsxA NONE
        rsxB NONE
        rsxC NONE
        rsxD NONE
        rsxG NONE
NFH28_RS12545 NONE
         nth 2546518 .. 2546531 +  -5.3  -3.80114   AAATTCTATCTATCC               GTGAT CAGG ATCAC                TTTGATAACTTCATG  59 192
        dtpA 2548481 .. 2548503 + -13.5  -6.17184   GGAAACAACATTCAG           GCCGCTAAC TGTGC GTTAGCGGC           TTTTTTTTTGCTCGT 100 48
        gstA 2549178 .. 2549207 +  -6.4  -2.93708   AATTAATGTCATGTT       GCCGGATAGC TCGCTGTACC GCCATCCGGC        CTCTTTTTAGCAGCA  55 35
        slyB 2554515 .. 2554547 +  -2.7    -3.727   TGGCCAGCAACGGCA     GCCAGG-TTACCGT CTCTCC ACGCTAAACCAGGC      TTTACGTGTGGTCAC  52 0
NFH28_RS12600 NONE
NFH28_RS12605 NONE
NFH28_RS12610 2558412 .. 2558432 +  -5.3   -4.3665   GGACATGTTATCGCC            GCCCACATG GAT CATGAGCGC            TTTATCTTTCACTTC  69 76
NFH28_RS12630 2560813 .. 2560832 +  -6.4  -5.41941   AGACCATCATTGCAA            CGCCTG AGCAGTAA CAGGCG             TTTTTATTTCCTTTA  91 12
NFH28_RS12635 2561992 .. 2562013 +  -7.3  -2.97058   CTGTAATTTCATTGA           TAGCGGC CTCACATC GCCGCTA            TACTTTGAATATCTT  59 35
        gloA 2562464 .. 2562491 + -14.8   -4.2828   GGGTAACTGATCCCC        CGCCGGGCGCAG GTCA CTGCGCCCGTTG         TTTTACTGCATCCCG 100 31
         rnt 2563250 .. 2563267 + -11.3  -4.05446   GATGGCGGTAAAAAA             GCGACCT TTAC AGGTCGC              TTTCTCCTTGCACAG  91 69
NFH28_RS12655 2564791 .. 2564819 + -13.3  -4.20868   ACAATTCGCTAATAT        TTTATCCTGTCGT TTA ACGACAGGATAAC        TTCTTCTTTTGCGCC 100 29
        sodB 2565505 .. 2565526 + -14.5  -4.07885   GCATAAGTCTGAGTA           CGCAGAAGG TACG CCTTCTGCG            TTTTAGAGAGGGATA 100 35
        purR 2567080 .. 2567093 +  -4.5   -4.2558   GCAGCCATGCCAGCG               CG-GGC GAG GCCTCG               TTTTGCTGCCACGTC  66 117
        punC 2569434 .. 2569453 +   -10  -2.91276   ACGTCGGATAACTGG            CTCACGGA ATTG TCCGTGGG             ATTTCTCACAAAGCC  72 224
         cfa 2570678 .. 2570702 + -14.3  -3.72228   TTCCTCGCTAATCAT          CTCCCCCGCAT TTC ATGCGGGGGAA          TCTTATTTTCCGTTA 100 30
        mdtK 2572955 .. 2572974 +   -10  -4.39828   GCGATAATACGACGA            TAGCCGTC GCAT GGCGGCTA             TTTTCTCGACATGTT  87 34
NFH28_RS12700 NONE
NFH28_RS12705 2573677 .. 2573687 +  -6.8  -3.17392   ATAGCCAAGACAAAC                 CGCA ATA TGCG                 TTGGATTACGCACTA  56 441
NFH28_RS12860 NONE
NFH28_RS12865 2598897 .. 2598912 +  -3.2  -2.78438   ATGATATAGTAGAAT              CCCCTT ATTT AACGGG               CTTTACCATGTCGTA  43 181
NFH28_RS12870 NONE
        mlrB 2601212 .. 2601229 +  -7.7  -5.00616   ACGTTGTTCGTATTC             TGGTCTC TGGC GAGGCCA              TTTTTTCGAAACGCC  91 457
        ttrB NONE
        ttrC NONE
        ttrA 2608791 .. 2608804 +  -2.3  -2.73067   TCATTTGGGGTTACT               TCCGG TTGA CCGCA                TAATCTGTGATTGAA  40 263
NFH28_RS12910 NONE
NFH28_RS12915 NONE
NFH28_RS12920 NONE
NFH28_RS12925 2613201 .. 2613222 + -14.4  -3.28712   CCCGCTGTTGCGCAA           CGCCGCCC CTGTTC GGGCGGCG            TTATCGCCAGCGACA 100 58
        pykF 2615015 .. 2615029 +  -8.5  -5.99154   AATTTGTTTAAAAAA               GCGCC CTTCC GGCGC               TTTTTTTATTTAATC 100 58
         lpp 2615550 .. 2615568 + -14.6  -5.75342   CCTGCGTAATAAAAA             TGGCGCAC ATC GTGCGCCA             TTTTTTTTACCCACA 100 46
NFH28_RS12940 2615854 .. 2615904 + -15.1  -3.72695   CATCTGTAAATAATT TGACGCACAATATAAAATGGCGCAC ATC GTGCGCCATTTT-T-TTGTCCGTCG TTTGCTGCAAAGGCT 100 28
NFH28_RS12980 2624618 .. 2624630 +  -6.2  -3.30124   GTAACATAGCCGGAT                GGCG GCTAA CGCC                TTATCCGGCCTACAC  59 277
        ydiK 2629790 .. 2629816 + -15.8  -3.56862   CAAGCAGTCATAATC         CCGTCGGGCGGC ATT GCCGCCCGATGC         TTTAGCGACGTTTAT 100 28
        rprA 2630199 .. 2630220 +  -9.5  -5.21709   GTCGAAACGGTGTCG           GTGGTGCTA TTTA TAGCATCAC            TTTTTTCATATAAAA 100 147
NFH28_RS13010 2630730 .. 2630740 +  -5.4  -2.62616   CGTTCAGGCGGCATC                 TCTG AGT CAGA                 TAATATGAAAAATCG  50 151
NFH28_RS13015 2632186 .. 2632202 +  -5.1  -3.34239   TCAATGCAATAAACC              TGGCATT TTA AACGCCA              TGTTATGTACATATA  54 255
NFH28_RS13020 NONE
        ydiB NONE
        aroD 2635357 .. 2635367 +    -4  -3.33696   GTTATCTGACATGAA                 TATG TTC CATA                 TTCATTGAAAGCCGC  50 91
NFH28_RS13035 NONE
NFH28_RS13040 2638220 .. 2638267 +  -7.9  -2.54801   AGGATCGTACCGGAA C-GTCTTATTCGGCCTGACTGCT TTAC GGCA-TCAGGCCGAATAAATCAG ATATATTTCGCCGTC  59 40
NFH28_RS13050 NONE
NFH28_RS13055 NONE
NFH28_RS13060 NONE
NFH28_RS13065 2643010 .. 2643023 +  -8.1  -3.68222   GAAACACCGGATAAC               GACGC TACG GCGTC                TTATTCGGCTTGCCC  69 47
        fadK 2644723 .. 2644752 + -19.3  -3.08283   CTGCGGTATAAATTG       CCGGATGGCGACG TTAA CGCCGCCATCCGG        TATTACACTACTTCT 100 30
        ppsR 2648305 .. 2648316 +  -4.4  -3.80516   TAACCGCAGGATGTA                CTAG CAAA CTAG                 TTTAATGGGTTGGTT  58 22
        aroH 2649516 .. 2649538 + -15.6  -4.21631   CCGCTTTTAATAGCT           CGCCCATCCT GCC GGGATGGGCG           TTTCTTCGATGCGTT 100 31
        hemP NONE
NFH28_RS13165 2664828 .. 2664844 + -15.1  -4.92385   AATAAATAAGTTATA              CGGCGGC AAT GCCGCCG              TTTTATTTGGCTCTG 100 32
NFH28_RS13185 2667805 .. 2667836 +  -6.6  -3.16961   AGGCGTCACCACGGA      AT-AACCGGGTTACG TAA CGTAACCCGGTACAA      TATTACATCTTATAG  59 40
        pfkB 2669864 .. 2669879 + -11.8  -3.01791   AAAATCGGTTAACGG              GCGGCG CATC CGCCGC               TGTTAAAAACACAGT  81 71
        ghoS 2670230 .. 2670240 +  -4.6  -3.50466   CCGCCGCGGCGCGTC                 CGCG ATG TGCG                 TTAGTTCGTATTTTT  54 50
NFH28_RS13205 2671183 .. 2671205 + -12.1  -4.81851   TATAGGTACAGCCCA           TGCCGGATA CGGGC TATCCGGCA           TTTTTCAGTTTACAT 100 36
        hxpB 2672601 .. 2672625 +  -7.8  -3.53012   GTCAACGGGCAATTA         GCCGCTGAGCC AGAC GGCA-AGCGGC          TTTGACAGAGACAAA  67 58
NFH28_RS13220 2673329 .. 2673340 +  -4.4  -3.30038   CGCCAAAATCATTTT                TGGT ATAA ACCA                 TTCCATTTGAATATA  52 49
        tcyP 2674897 .. 2674927 +  -9.8   -5.5112   AAAATGTCTGTCACT       AAAAACGCCGGT CTCCAGT ACCGGCGTTTTG       TTTTTTCTTAGTCAG 100 89
        katE 2678033 .. 2678047 +  -2.8   -3.1211   CGAGGCATCCAGAAT               GCGT AAAAAGC ACGC               TTCGGTGATCTCCTC  43 264
        nadE 2684807 .. 2684833 +  -3.7   -2.7535   GTACTTCTACTGTTG         TGCCGGATA TCGCTCGTC TATCCGGCC         TCCTCTCTTCCCAGC  45 43
         cho 2685872 .. 2685885 +  -3.8  -4.36127   TGCGGAAAGTTATTC               TGCC GCAGCA GGCA                TTTTACCTTCTTGCG  64 106
        xthA NONE
NFH28_RS13320 2694614 .. 2694631 +  -4.1  -3.53012   ACATTCACCTGAATA             TCAGGAC GACT GTTCTGG              TTTGCCAGCCCGACC  51 184
        gdhA 2696317 .. 2696339 +  -7.6  -5.41143   TTATTCGGTCTGACG           GCCTGTCTCC GCA GCAGGCGGGC           TTTTTTTGCCCGCTC  95 70
        sppA 2702015 .. 2702055 +  -8.3  -2.79276   GCTTCATCAATAGCC  ATACCGGATGGCGGC GTCTGCTCATA GCCGCCATCCGATAA  TCATTAATACGTCCT  64 42
        ansA NONE
        pncA 2704140 .. 2704152 +  -3.3   -4.2349   TACCTCTTATCCGGC                TGCCG TTA CTGCA                TTTTCAATGTCGCAA  60 372
        gapA 2706241 .. 2706258 + -11.3  -5.95166   CACAGTCATTGGTAA             GAGCGAC TCAG GTCGCTC              TTTTTTTTGCTTAAA 100 51
NFH28_RS13380 2707472 .. 2707520 +  -3.1  -4.37886   CTATAGGATCTGAAA GGCGTCAGC--CGCCATCAGGCA TGACC TGCCGGATGGCGGCGCTTACACA TTTTATCCGGCGTCA  62 63
        yeaG NONE
NFH28_RS13405 2714497 .. 2714522 + -11.9  -3.91897   GTGCATAACCATAAA         TCAGCCCGTAA TGAG TCACGGGCTGA          TTTATCACTAACAAG  93 33
        dgcJ NONE
NFH28_RS13420 2717346 .. 2717376 +  -2.5  -4.62069   CCTGTTAGCAATACG       CGGCGTTGATG GCAATTTAA TGACAACGCCG       TTTTTCACGTAGAGA  65 180
NFH28_RS13430 2717965 .. 2717986 + -11.5  -5.03715   CGCCCGTCAGATACT           GGCCTGGCG TCTG CCCCAGGCC            TTTTTTAAACATGGT 100 43
NFH28_RS13440 NONE
NFH28_RS13445 2720595 .. 2720607 + -10.5  -3.91716   CCGTAACCAGCCACA                GCGCC CGA GGCGC                TTCTTTCGGCAGTAA  80 148
NFH28_RS13460 2721473 .. 2721503 + -14.3  -2.90219   TAAATTCATTTTGAA       TAATAAAGGCTAC CTGTC GTAGCCTTTATTA       TCTCTGAAAGTTCTG  89 115
NFH28_RS13495 NONE
NFH28_RS13500 2725823 .. 2725848 + -11.1  -3.41693   TATGAAGAGTATAAA         CAAGGGAGGGG TTTA CTCCTCCCCTG          TTCGTTAATAATGCA  80 233
NFH28_RS13535 2730937 .. 2730958 + -15.9  -2.52464   TCTCTGCCGACAATA           CCGGGAACC CATG GGTTCCCGG            TGCGTTAACGGCGAC 100 43
NFH28_RS13565 2736792 .. 2736809 + -14.1  -4.90296   CAATAACAACAGTAA             GCCGGCG ATGC CGCCGGC              TTTTTATCCCATTTT 100 35
NFH28_RS13570 2737470 .. 2737504 + -13.6  -2.96444   ATCATGACTATTTCG    GCCAT-CCCGGCGTG AGAGAG CACGCCGGGCAAGGC     ATTATTATTCCAGCG  87 34
NFH28_RS13590 2741134 .. 2741166 + -13.4  -3.05384   ACGATCACCGGCCAA      CCGCGCCAGGGTCT TGCAT ACGCTCTGGCGCGG      TTAAATCCCCAGGCC  86 295
        pagD 2743791 .. 2743811 +  -3.9  -4.47707   CCCGGAAATCTTGAT            TGCCATCAA ATA TAGCTGGCA            TTATTTTTCCTGACG  66 83
        cspF 2744186 .. 2744196 +  -2.6   -4.3129   TCAGTGGCGAAAATC                 TAAA AGA TTTA                 TTTTGCTAATGACTC  60 134
NFH28_RS13615 2745037 .. 2745072 + -10.5  -2.94329   CGCTGTGAAGAGAGT    GCCGCTAACCTCTTG ACACGA CAACAGGTTAGCGAC     CTTTACTTCCACGTG  72 49
        msgA 2745481 .. 2745498 + -12.7  -2.89191   ATGTCCGATCGAAAA             CAGCGCC CTGA GGCGCTG              TCTGTGACGATATAA  82 63
NFH28_RS13625 2746794 .. 2746806 +  -3.3  -4.04174   GGCACTGCTTGAAGA                CAGCG AAT CGCTA                TTTCATTCTCTGACA  57 99
        rluE NONE
NFH28_RS13645 NONE
NFH28_RS13650 NONE
        mnmA 2753329 .. 2753378 +  -2.8  -4.93877   GGTCTGATTATTCAA TACACAACACCATTCAAGTCGC CTCAAA GCGGCTTAAAAGATGAAGTGTA TTTTATTTGATACAA  70 34
        hflD NONE
        purB 2755431 .. 2755459 + -12.6   -2.7955   TAAATAATGCCTGCC        TCACCCTCTTTT CTTCA GAAAGAGGGTGA        CTATTTGTCTGGTTT  82 34
        phoP NONE
        phoQ 2757693 .. 2757708 +  -4.7  -2.90723   GAATAAACATTTCTG              TGCGT TCTTCC ACGCA               TCTCGTTAAGCATCC  48 35
NFH28_RS13680 2759215 .. 2759230 + -10.4  -4.27117   ACAACACCATTGATA              CGTCGG ACTG CCGACG               TTTATATTCTGCCAG  90 355
        potA NONE
        potB 2763763 .. 2763788 +  -6.3  -2.53263   ACACGCATCCAGGCA         TGAAGTTTATT CAAG GGTAAACTTCA          TGCCTTCGGCATAAA  53 62
        sifA 2765247 .. 2765260 +  -6.7  -2.83867   TAAAATTCGCGGCTT               CAAGC GGCA GCTTG                CTTCTTCCTGGCTGC  56 207
        potC 2766150 .. 2766166 +    -5  -2.71011   CTCGTGATAAAACCA              AGGGCC GATAA GGCCCG              TAATTCAGGGGACGT  49 15
        potD 2767394 .. 2767404 +  -4.6  -3.06831   CTCTTCAAACTCGCT                 GCCG ACT TGGC                 TTGGCTCAAGATTCA  47 188
         mfd 2776021 .. 2776049 + -10.3  -2.85069   ATTGCATAAGCGTCA       GGCCGGGCGTCA TTACTC TG-CGTCCGGCC        TAATCTTTACAAATT  72 32
NFH28_RS13750 2777153 .. 2777174 + -15.9  -5.74684   CTGACCGACAAAAAA           GCCTCGCGA TGCA TCGCGAGGC            TTTTTCTTTTTATTG 100 51
        comR 2778599 .. 2778617 +  -2.4  -4.26351   TTACAGCGTTGCTGC             GTGGTAGT GTA AGTATCAC             TTTCTTGCATTGATC  60 266
        fhuE 2787063 .. 2787080 + -12.7  -3.44146   AGCGCCATTAAAAAA             GGCAGCC GAAT GGCTGCC              TTAATTCTCCCCAAC  93 66
NFH28_RS13880 2800422 .. 2800436 +   -10  -4.13945   CTACAGCAATAAACG               GCCTAC TCT GTAGGC               TTTTCAAATACCGCT  82 29
         rne 2806574 .. 2806591 + -12.7  -5.25803   AAATGCTGATACAAA             GCCGACC GCCA GGTCGGC              TTTTTTATGCCCCTT 100 44
        flgA NONE
        flgM NONE
        flgN 2818339 .. 2818366 + -10.7  -2.64472   CCTGAATGCCTTGTA        G-GCCTGATAGC ACAGC GCTATCAGGCAC        TGAATTTACGCCGTC  74 74
        mdtH 2823825 .. 2823847 +  -5.4  -2.86492   AAACGCACGCCGCGC           CGGATGCTGG AAC CCGGCGCCTG           ATTTGATACCTGTCG  51 2
        grxB 2824569 .. 2824591 + -10.6   -4.7657   ATCTAACTCCCGCCA           GGCGGCAA CCCTTTC TTGCCGCC           TTTTTCAGCTTTTTC  95 35
NFH28_RS14005 2825252 .. 2825267 + -11.8  -5.81412   CCAATTGATTTCGGA              GGGCGC GCTC GCGCCC               TTTTTTTTACGTGCA 100 33
        pyrC 2826420 .. 2826449 +  -3.7  -3.01712   TTACCTGTTGCTATA       TACTGGATTTA ACTGTATA TATATCCAGTA        TATTCAACAGGGGGC  47 50
        dinI 2826741 .. 2826756 + -11.8  -5.63517   CAGTGATGTATGTTT              GCCGGG TCGC CCCGGC               TTTTTTATTTGCGCA 100 52
        bssS 2827282 .. 2827297 + -10.4  -2.73799   GCTCCCCCTCTCTCA              GGCACC GTAA GGTGCC               TCACTTATTTCTGGC  71 49
        solA 2828495 .. 2828513 +  -9.5   -4.1822   TAGCCAATAATTTGT             CGGCCCC GTAAA GGGGCTG             TTTATTAAGGTAAGC  84 31
NFH28_RS14030 2828734 .. 2828744 +  -4.6  -3.28791   TAATGCCAGTTCTTG                 CCGT TGC GCGG                 TTATCAGGGGGAAAT  52 116
NFH28_RS14035 NONE
NFH28_RS14040 2830060 .. 2830099 + -12.1  -3.13403   AAGTAACGCCTGGCG  AAATGCCGGATAGCGGC CTTTAC GCCGCTATCCGGCAAAA   TATTACTCAGCCGGA  83 35
NFH28_RS14050 2832300 .. 2832319 + -12.2  -4.69464   GCGCTATTGACAGGA            TTGCAGCC GTCA GGCTGCAA             TTTTTCCCCTCTTTT 100 31
        mdtG NONE
NFH28_RS14060 2834373 .. 2834391 + -10.3  -4.62783   ATTTCACTATAAAAA             TACCGGC ATCAC GCCGGTA             TTTTTCACCTCACTC  91 279
        mdoC 2839979 .. 2840009 +  -4.6  -4.42464   CCGCCAACCGTACCA       GAACTCGTTGCCAG AAA CGCGTAGCGGGTTC       TTTCTTTAACACCTT  68 86
        csgD NONE
        csgE NONE
        csgF NONE
        csgG 2846898 .. 2846918 +   -14  -5.86976   GATGAATACGACAAA            GCGTGGGG AAGAA CCCCACGC            TTTTTTATTTTGTGA 100 39
NFH28_RS14155 2850183 .. 2850202 +   -10   -4.9755   ATATTTAAGTTGAGA            GCCTGTAC AGAA GTACGGGC             TTTTTGCTTATATGT  93 40
NFH28_RS14160 2850367 .. 2850386 +  -4.2   -4.9755   ATATTCAAGTTGAGA            GCCTGTAC AGAA GTAAGGGC             TTTTTGCTTATATGT  74 40
NFH28_RS14165 2850551 .. 2850570 +   -10   -4.9755   ATATTTAAGTTGAGA            GCCTGTAC AGAA GTACGGGC             TTTTTGCTTATATGT  93 40
NFH28_RS14190 2856626 .. 2856647 +  -8.7  -4.24948   CTGGGCATCACCATT           GGTGGAGCA TAAA TGCTCTGCC            TTTTACATCTCATGA  80 199
NFH28_RS14195 2858443 .. 2858480 +  -4.3  -3.90707   GTCATAAGTTGGCAA   CGCGATGTAAATA TTCCCCCTCCTT TACTTACATCGCG    CTTTTTTTCATGCCG  59 183
NFH28_RS14200 2859551 .. 2859561 +  -5.4  -2.91264   GCTCTGAAAGTCAAT                 GCTA TAT TAGC                 TGTATGCGTGAAGCG  51 125
        putA 2867147 .. 2867164 +  -9.1   -4.7373   ACTGTGGTTAATTAA             GGCTCCG TCAA TGGAGCC              TTTTTACTCGCGTCA  90 42
NFH28_RS14220 2867779 .. 2867796 +  -3.4  -4.84527   CCCGCTGTGCACCCA             TCCG-GC AATCA GCGCGGA             TTTTTCATCTATCAA  74 220
        wrbA NONE
NFH28_RS14240 2869750 .. 2869788 +  -8.1  -4.09511   GAACGTAAAAACGTA  TAACACAAACGCCCCCGC CTGC GCGGGGGCATATG-GCTA   TTTTGCAGCAGTGTT  74 23
        cbpA NONE
        cbpM 2876054 .. 2876081 + -14.9  -2.78679   GATAAAGGCAATAAA        CCGAGGGTGGGC TTTCT GCCCACCC-CGG        ATTTACATGCACCCG  89 46
        iraM 2877411 .. 2877433 + -17.8  -2.71325   TCGCCAAAAGCATAA           CGGGCTGACA TCA TGTCAGCCCG           TGGGTTTATCCCTGC 100 387
        hpaR NONE
        hpaB NONE
NFH28_RS14340 2889606 .. 2889638 +   -12  -2.50443   GAAGATTTTTATTCC      CGCCGCGATGTTTG CTCGC CATAAATCGCGGCG      ATTAATACAATCTAA  79 100
        hprR NONE
NFH28_RS14355 2892478 .. 2892491 +  -6.7  -3.35798   TGTTCCCCTTCCCTG               CCACA GGGC TGTGG                TTATCAATACAACCT  61 56
NFH28_RS14360 NONE
NFH28_RS14365 2894754 .. 2894766 +  -7.7  -3.15503   TCACATCCTTTTAAA                GGGTT GTT AACCC                TGTTGAATGTTCCCA  64 471
        sopB NONE
        sigE 2896973 .. 2896991 +  -2.4  -4.84527   TCATCTCTCTCATTT             TGCTCT GTTTGCG GGAGCA             TTTTTAGTGTGTAAG  72 144
        pipB 2898452 .. 2898468 +  -3.1  -3.31188   CTAAAAACACTATTA              TTGTTTA ATT TAAATAA              TTCATAATTGTAGTC  48 200
        pipA 2899286 .. 2899307 + -10.1  -4.04806   GCCTAAAAAAACAAA           GGGGCTACC TTTC GGTAACCCC            TTGTTTAATCTGGCG  82 132
        yccA 2900479 .. 2900496 + -12.7   -5.0917   CATTCCCCTCTTCCA             GCCCTGC TTAT GCAGGGC              TTTATTTTTTGCTAC 100 45
        tusE 2900948 .. 2900964 +  -7.9  -3.55801   TTGTCCACACGAGCA              GAGCGCG GCC CGCCCTC              TTTCAGCCACTTGAT  62 98
        rlmI NONE
        hspQ 2904361 .. 2904398 +  -8.5  -4.86731   TACGTAACTGATTGT   ATTTAAAAGGCCGGAAA GCGA TATCCGGCCATTTAAAC    TTTTATTTCGCCAGC  89 30
NFH28_RS14445 2905714 .. 2905725 +  -2.2  -3.05816   AAGCGCTTCCAGTAA                TCTG TAGA CAGG                 TTAACTACGGAATCG  42 89
        mgsA 2906210 .. 2906236 + -15.8  -2.76737   CTGAAATAAACGCTA         CGCGGGCGGGAT GCT GTACCGCCCGCG         CTTTAGGGCTTCCTC 100 32
NFH28_RS14460 NONE
        yccS 2911051 .. 2911086 + -14.1  -2.55351   GCGAATGAGCCCAGT   CGGCAAGCTCCTGGCGA CGAC TCGCCGGGAGC--GCCG    CTTCATGTACGCCGA  81 41
        sulA 2912422 .. 2912455 +  -5.4  -4.80882   GTGCTAACGTTTTTT     TTGCG-AGAACGCTT GTCAG AAGCGGTTTCCGCAA     TTTTTGCTGTACGAT  76 94
        ompA 2913782 .. 2913796 + -12.8  -5.23316   CCGTCTGATAAAAAA               CCCCGC GTC GCGGGG               TTTTTTGCTCTGGTC 100 45
NFH28_RS14490 2916223 .. 2916237 +  -5.7  -2.77895   GCTGAACGCTTTTAT               TCCGA ACTGA TCGGA               CTTGTTCAGCGTACA  50 16
        fabA 2916875 .. 2916899 + -18.7  -4.82901   AAAGCCCATAAAGGC          GAAACCTCCGC ACT GCGGAGGTTTC          TTTTTCTAAAGAGAC 100 81
NFH28_RS14530 2926367 .. 2926377 +  -2.4  -4.00348   TTCAATACCAGCTCC                 GCGC GTT GCTC                 TTTGGTTAATTCGAA  54 341
NFH28_RS14550 2931458 .. 2931470 +  -2.7  -3.41024   CATTAACAAAATTAC                TATTC GGC GAGTA                TATTATGTTAAGACA  46 279
        gtgE NONE
NFH28_RS14560 2932490 .. 2932507 +  -2.5  -3.91196   CCTGCCCTATACTTT             CAGCCTG ACGA CTGGCGG              TTTCATATGTGTGGA  54 70
NFH28_RS14565 2933630 .. 2933650 +  -7.5  -4.82128   TCAACTGCGCCTGTA            TCCAGTCGT ACA GCGACTGGC            TTTTCTCTTTCCTGA  83 515
       sodC1 2944771 .. 2944803 +  -6.3  -3.61654   TGTTAAAGGTCAGAA      GCTGTAACCTACG CCAAGCA CCTAGGTTCCAGC      TTTGACGTCACTGTC  62 121
        gtgA 2950240 .. 2950272 + -22.3  -3.14132   TATGAGGGGAAATAA      TAAATATCCTCCGGC ATA GCCGGAGGATATTTA      TTCATAAAGAACACA 100 218
NFH28_RS14680 2951226 .. 2951245 + -12.1   -3.4241   GGCACAAACAGAAAA            GCCCCGC ACGATG GCGGGGC             TTGAATTTGTTTGGT  88 394
NFH28_RS14725 NONE
NFH28_RS14730 2956557 .. 2956573 + -10.8  -2.58544   CGCCGCTGGTGGTGA              GCCGGG AGATC CCCGGC              GTTATCAACCTGAGA  66 198
NFH28_RS14780 2961430 .. 2961445 + -10.4  -4.64334   TACGTTAGAACATAA              CCGCCT ACTT AGGCGG               TTTTCTTGCGCCCTT  91 47
NFH28_RS14790 NONE
NFH28_RS14795 2962312 .. 2962336 +  -4.2  -3.30159   TAACAACCAGATATA          TCGGGGTGCT GTTAA GGCACCTCCA          TTCTACACGAATTGA  50 102
NFH28_RS14800 NONE
NFH28_RS14805 2966704 .. 2966720 +  -5.1  -4.40572   CGGGAGGGGTTACGC              CCTCC CGCCTGA GGAGG              TTTTATGCGCCTTAT  68 47
NFH28_RS14810 NONE
NFH28_RS14815 2967273 .. 2967293 +  -3.9  -2.51464   CAGTACACTCGTCAA            TGCTCCTGG ACG TCAGGAGGG            ATTAATGGCTAATGC  44 45
NFH28_RS14820 2968617 .. 2968629 +  -3.3  -3.50877   TTCAAGGGGTTAGCA                GTCGC ATC GCTAC                ATTTTTATAACATGG  50 52
        pncB 2969999 .. 2970025 + -12.3  -3.41745   TTAACCATGCCTGTG         CGAAGCGCCCG GAAAG TGGGCGCTTTG         TTACTCTTCTGACCA  90 37
NFH28_RS14840 2973778 .. 2973797 +  -5.7   -4.6526   CCTAAATTCTCAATG            GTTCGCG AGCAGG TGCGAAC             TTTTTACAGGTTTCT  74 65
        asnS 2975358 .. 2975374 + -13.7  -5.78622   TTACGTCACACTCAA              GGCCAGC TAT GCTGGCC              TTTTTTTTCGCCTGA 100 44
        ompF 2977070 .. 2977085 +    -9  -5.77988   TTTATGCCTCAAAAA              CAGGAC TTCG GTCCTG               TTTTTTTATCTCTCT 100 58
        aspC 2978437 .. 2978467 + -14.2  -3.50853   GACTGGCGTGACCGA       TAAAAAAGCCTGCA ATG TGCAGGCTTTTTCA       TTCTGCTTACCAGAC 100 50
        elyC 2990550 .. 2990574 +    -7  -3.36991   CCCGGGGCCGACCAT          CGCCAGAAGC TGATC GCTACGGGCG          TCTTTAAGCATACTG  58 251
NFH28_RS14970 3008170 .. 3008190 + -10.4  -5.26247   GGCTGCGTTATATTA           CGGGG-CGC CTTT GCGGCCCCG            TTTTATTTATTTTCG 100 77
        focA 3009418 .. 3009435 +    -2   -3.1247   AGTAAATAAAAAATC             CACTTA AGAAGG TAGGTG              TTACATGTCCGAGCT  42 63
        pflB 3011764 .. 3011783 +  -7.8  -4.79667   AAAGCGTACAAAAAA            GGCTCCAT ATCA GTGGGGCC             TTTTTAATGACTTTT  86 67
NFH28_RS14990 NONE
        pflA 3014158 .. 3014179 + -11.6  -4.39568   TTACCCGCTTTTAAA           CGGCTACC CATGAC GGTAGCCG            TTTTGCTGTCTGGAT  93 53
        trxB 3031621 .. 3031637 + -12.3  -4.89063   AACAAAAGTAAAAAA              GGCGACT ATA AGTCGCC              TTTATTTTTGCGTCG 100 56
        cydD NONE
        cydC NONE
         aat NONE
NFH28_RS15070 NONE
        infA 3036508 .. 3036524 + -10.1  -5.10497   GGCGGCTGGATAAAA              GGTCGGT TTA ACCGGCC              TTTTTTGCGTCCATT  93 62
NFH28_RS15085 NONE
NFH28_RS15090 3039146 .. 3039169 + -13.2  -3.69364   CAGCGTTAATTTGCC          TCCCCGCGCCA GTT TGG-GCGGGGA          TTATGTCTATTGCAT 100 32
NFH28_RS15095 3039389 .. 3039408 +   -10  -5.79526   CATATTCAAGAAAGA            GCTCGTAC GAAA GTACGGGC             TTTTTTTTCACATAT 100 39
NFH28_RS15100 3040958 .. 3040977 +  -8.6  -5.49809   CATATTCAAGAAAGA            GTTCGTAC GAAA GTACGGAC             TTTTTTTCGCATTTG 100 252
        cspD 3045053 .. 3045073 + -12.6  -5.27335   ATCCAGGAGGCAAAA            TGCCAGCC CGATC GGCTGGCA            TTTTTATTTAACGCC 100 62
NFH28_RS15140 3049561 .. 3049575 +  -4.2  -3.95324   CAGCGCAGGCAACGC               CGTGAG ATG TTCGCG               TTCTTCTTCCCGATC  60 283
NFH28_RS15150 NONE
         hcp NONE
         hcr 3054873 .. 3054884 +  -7.2   -2.7464   CCCGGTAAGCGTCAG                CGCC ACCG GGCG                 ATTTACCACTCGCTT  58 63
        poxB NONE
        ltaE NONE
NFH28_RS15175 NONE
NFH28_RS15180 3060428 .. 3060441 +  -5.2  -3.78329   CGCTGCTGCTCGCGT               GCCG TCATAT CGGC                TTTGACTTCATAGCC  61 149
NFH28_RS15195 3062136 .. 3062166 +  -7.7  -3.97709   CCATAACCCCGTAAA      TTGTCTGGCATTCT GCCC GGGATGCC-GACAA       TTCTTCTTACCTACT  72 67
        artP NONE
        artJ NONE
        artQ NONE
        artM 3065285 .. 3065311 + -10.9  -5.68039   ATATTGAATAAATCC         GACGGACAAGT GGTTA ACCTGTCCGTC         TTTTTTTATCCATTT 100 118
        artJ 3066407 .. 3066427 +  -3.9  -4.93877   AGACCCAGACGGCGA            TACTGCTCC GCC GGAGCATCA            TTTTCTTTCATCAAA  75 272
NFH28_RS15290 3079025 .. 3079061 +  -7.1  -5.41143   CTTTTCGCCTGATTG    CTCTGGCAACGCCCTCT GAC GGAGGGCGCTATCGGCG    TTTTTTTCGCCGGTG  95 29
NFH28_RS15300 3081614 .. 3081624 +  -8.2  -3.09933   TAAAATCGCTTCACG                 CGCC AGC GGCG                 TTCGATCCGTTACAA  60 253
NFH28_RS15310 NONE
NFH28_RS15315 3084478 .. 3084491 +  -4.5  -3.48105   ATAGCCCATTGCCGC               CGCTT AACC AGGCG                TGTTTACTGACTTCA  52 189
        ybjG 3086544 .. 3086572 + -14.7  -3.70902   AAAAAAGAGTAATAT        TAAGCGCTCTGTA TGG TGCGGAGCGCTTA        TTTAACTCTCCAGGG 100 48
        deoR 3087355 .. 3087389 +   -20  -3.09908   CTGATGTATTAACCG     CCCGTAGCCGGATGCG ACG CGCACCCGGCTACGGA     GTTATTTTACGAGAA 100 29
NFH28_RS15340 3089880 .. 3089890 +  -4.6  -3.14564   ATTTCATCGCCGCCG                 CGCG GAC CGTG                 TTCATGCAGCCATAG  50 437
NFH28_RS15355 3091117 .. 3091131 +  -8.6  -2.87132   GGATAGGCCGAAATA               CTCAGT CTG ACTGAG               TCTATAAAAAAGCAG  65 225
NFH28_RS15360 3092560 .. 3092579 +  -4.4  -3.21938   CTATCACACGCCCTT            TTTTAAAC CAGG GTTTGAAA             TTACTACCATTTTCC  49 513
        rimO 3100578 .. 3100593 +  -8.2  -2.50074   TTAACGCCACCTCCC              CCGGCG CGGG TGCCGG               ATGTGTTATCCCGCC  59 37
        moeA NONE
        moeB 3109159 .. 3109177 +  -8.8  -2.87564   GATAAACATACCAAA             GCACGGTT TAT GGCCGTGC             TGTATCAACAGATAA  65 51
NFH28_RS15445 NONE
NFH28_RS15450 3112804 .. 3112821 + -11.3  -3.14211   TGGCGCTACGTTTAA             CAGGCCT ACGC AGGCCTG              TTAATCAGAAGGGAT  81 81
NFH28_RS15460 3115191 .. 3115218 + -10.6  -3.02144   CTGCCCGCTTAACTG        C-GGTGCGCCC TTTGTCT GGGCGCACCCG        TCTTACCGGACCTAC  76 54
        ldtB 3120213 .. 3120239 + -19.6  -3.03243   ACAGACTCTGCCTGC         GAAGCCCGATAG ATA CTATCGGGCTTC         TCTTACGGCATCAGT 100 40
        mntS 3122175 .. 3122201 +    -8  -5.77632   TTTATTTTGCATCCT         CAACGGAAATGG CGC CCATTTCCCCTG         TTTTTTTGTGGTTTT 100 62
NFH28_RS15500 3124006 .. 3124023 +  -8.4   -5.0925   TTCAGGCAAAAAAAA             TCCGCC CCGAAA GGCGGA              TTTTTCATTTTCACC  91 48
        rhtA 3125901 .. 3125927 +  -6.8  -3.61398   TTTTTGTCATATTTT         TTCTCATTTT TTACATT AAAATGAGAA         TTATTACCCACCAAA  64 124
         dps 3126745 .. 3126763 +  -7.4  -4.19953   TAAGTCATCCCTATA             CCCCTG CCTGGCA CAGGGG             TTTTGCACTTAAATA  74 162
        glnH 3127847 .. 3127887 +  -9.9  -3.40597   AACGACCTGATGTTG GCTTGT-GGCCCGGT-AGTG AGGA CGCTCACCGGGCCTAC-AGC TCTTTCCGTGACGGA  74 41
        glnP 3128618 .. 3128629 +  -4.4  -2.95448   GTCGTCTTGAAAGAA                GGAT GAAA ATCC                 TGTGATTGAATTTAA  48 9
        glnQ NONE
        ybiO 3131893 .. 3131910 +  -3.5  -3.90707   ACCTGACGGCGGAAG             GATTGGCT TTC AGC-AATC             ATTTTTTTAATAAAG  56 224
NFH28_RS15545 3133210 .. 3133222 +  -4.9  -3.41693   GACAAGAAAGGTAAA                TTCAA CCG TTGAA                TTAATTAATAATCAA  54 147
        ybiJ 3133762 .. 3133783 + -13.7   -5.8187   TTGTTACCCTTATTT           GCCCGTCCG TCAC TGGACGGGC            TTTTTTTATTCGCTA 100 154
        cecR NONE
        hlyD 3140397 .. 3140413 +  -3.6  -3.65046   TTTAATGACGAGGCA              CGGCAT GAGTG AGGCCG              TTATTACGCTGCACG  51 14
NFH28_RS15580 NONE
NFH28_RS15585 3143310 .. 3143335 +  -8.3   -3.9941   TAAGGCGTTCACGCC         GC-CATCCGGCA TTA TGCCTGATGCGC         TTTGCTTATCAGGCC  76 75
NFH28_RS15590 3144845 .. 3144857 +  -4.8  -4.46212   CACGAACGCGTTGTT                GCCA CTTCA TGGC                TTTTCTCCTGAAGCA  68 388
NFH28_RS15600 NONE
        clsB NONE
NFH28_RS15610 3147957 .. 3147983 +  -5.9   -4.4009   ATAAATTTAAGCAGA        CGCGTTTTCGCT TTCC AGC-ACAACGCG         TTTTATCCGGTAAAA  70 37
        yvcK 3155508 .. 3155535 + -13.6  -2.95894   CTGCGCTTATCAGAA        GCCTGTTTACACC GAA GG-GTAAACAGGC        TCTCTCCCTCTTCTG  87 59
        bioA 3166017 .. 3166033 +  -2.2  -3.36803   TTTAGCCATTAATCA              GCGGTA AGCGA TGCTGC              TTCTGGCTACACTTC  45 29
NFH28_RS15710 3166939 .. 3166961 +  -5.5  -4.33417   GTCGGCAGGCTATCC          ACGCTGTGCG GGTG CGC-CAGCGC           TTTATTCTCGCTGGC  69 417
NFH28_RS15740 3174512 .. 3174546 + -13.5  -4.25104   CCGGTTCAGGCTTAT     AAACGGGCCGCCGCA GCAGA TGTGGCGGCCCGTGG     TTTTACTGCAAGCAA 100 49
NFH28_RS15750 3177076 .. 3177094 +  -3.8  -3.72695   TCCAGCACCATGACT             TTATCCGC CAG GTGGAGAA             TTTCATCGAGAGAAT  53 492
        modE NONE
        modF 3181924 .. 3181938 + -11.4  -3.29263   AATGTATTATCAGAA               TGGCGC CGC GCGCCA               TTCTGGAACCACTCT  83 40
NFH28_RS15785 3183018 .. 3183032 + -12.8  -5.44119   TCCGTTTCATTCCCA               GGCGCG TAA CGCGCC               TTTTTTTCGGATAAA 100 55
        galE NONE
        galT NONE
        galK NONE
        galM 3187623 .. 3187645 +  -7.7   -2.8001   GGTTATGCGTAAGCA           TTGCCGCCA ACACC TCGCGGCAA           TATAATGAGAATTAT  60 179
        gpmA 3188461 .. 3188475 +  -7.8  -3.30124   TCACCTTTGCCGGAT               GGCGGT ATA ACTGCC               TTATCCGGCCTACGA  65 41
NFH28_RS15850 3197636 .. 3197652 +  -3.7  -4.56597   CGACAGCGTCCAAAA              TGAAAGA AAT TCCTTCA              TTTTTAGCAACCAGA  69 199
NFH28_RS15860 NONE
NFH28_RS15865 3199907 .. 3199942 +  -5.4  -4.57353   TACATTAATATTGGT    AATACCGGTCCGGTAG GCTG TTACCGGACCAATATG     TTTTCTATCCTGCAC  72 44
NFH28_RS15875 3201763 .. 3201780 + -11.3  -5.54907   AAAAGTCTGATAACG             GGAGAGC TTTC GCTCTCC              TTTTTATTTTGTCAG 100 48
        zitB 3202797 .. 3202823 + -13.6  -3.51934   ACCATTAACGGGAAA         GCGCGCGCGATC CTC GCTCCCGCGCGC         TGTTTATCCACAGGC 100 33
NFH28_RS16030 3228705 .. 3228734 + -17.9  -2.79535   AGCGTTAATTGACAA       CCGGATGGCGACG CAAC CCTCGCCATCCGG        TACATTTTCCCTTTT 100 33
NFH28_RS16035 3229975 .. 3229986 +  -4.4  -4.21194   TAAAACGGGCGTGAG                GACA GTGT TGTC                 TTTTCAATAATGCCG  62 120
NFH28_RS16130 3248140 .. 3248165 + -11.1  -2.87463   ATCCTGATAGCAGAA         TGCCCGGTAGT TTGC GCTACCGGGCC          TGTATCACGCCCCTT  75 34
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC NONE
        kdpD NONE
        kdpE 3258085 .. 3258110 +  -9.7   -2.7471   GTCATTTATTTTCGG         CGTCGCGAATA ATTA TTTTCGCGGCG          ATATTATATTTTATA  69 80
       speFL 3258715 .. 3258737 +  -2.8  -3.96148   ATCAGCGGGATAGCT           TTGATTTTTT CCG GAAGAATCAG           TTTCTCATGCGAGAA  54 328
        speF NONE
        potE 3262313 .. 3262341 + -14.5  -3.18657   CACGGCTGATGGCGC        GCCCGGGCTGCGG TAA CGGTAGTCCGGGC        ATTTTCACTCTTTGA  95 32
NFH28_RS16190 3262935 .. 3262950 + -10.4  -5.12068   CGTTAATACAAAAAA              GGAGCC GTAA GGCTCC               TTTTTCTTCCATATC  93 104
        ybfF 3266145 .. 3266183 + -13.1  -2.57244   CTAACTGATTAAAAA  C-TCATCGCCTGTGCGCG ATTA CGCGCGCGGGCGTTGGCG   TCGCTTCCTCGCTGA  84 37
        ybfE 3266598 .. 3266615 +  -3.4  -3.37755   CGTGTAGCAGAGCGT             GCAGTC CCGCGT GATTGC              TGTTTCCGCATATCT  48 63
        fldA 3267401 .. 3267417 +  -6.5  -4.55128   CAGTTTTATTAACAT              CTGCGAG AGA CTTGCGG              TTTTCATTTCGGCAT  76 185
         fur 3267994 .. 3268011 + -11.3  -5.39721   TAAATCTTTCGAAGA             GCCAACC GCCC GGTTGGC              TTTTTTATATCCTCC 100 44
        tcuR 3268994 .. 3269009 +  -3.2  -3.14683   CCGGTGAATGGCCAG              GCGCAA CCCT TTACGC               TTACTAAACCCCTGT  46 3
        tcuA NONE
        tcuB NONE
        tcuC 3273275 .. 3273287 +  -6.2  -3.34715   TGCGGTATTGATACA                GGCG CTGTA CGCC                TCTTTCAGCCGGCTA  56 302
        nagB 3280247 .. 3280272 + -14.7  -2.87672   TCTGTAATGTTGTCT         CCGCCCCGC CAGTCAAT GCGGGGCGG          TAAATTTTTGATATC  89 34
        nagA NONE
        nagC 3282721 .. 3282737 +  -3.7  -2.86177   AAATTCCCTGGGTAG              TTCATGA CCA TCAAGAA              TGTAATCTGCGATAT  46 69
        nagD 3283645 .. 3283656 +    -3  -2.80005   TTTTTCACTAATCAA                CAAT GACG ATTG                 CATTTTTCATTTTTC  41 194
        asnB 3285447 .. 3285462 + -10.4  -5.60993   TTAACGATGACGAAA              GAGCCC TTAG GGGCTC               TTTTTTTATAGCAAA 100 42
NFH28_RS16295 NONE
NFH28_RS16300 NONE
NFH28_RS16305 NONE
NFH28_RS16310 3286044 .. 3286060 +    -3  -3.33815   CATCGAAGAAATCAT             CTG-GCT ACGT AGCTCAG              TTGGTTAGAGCACAT  46 39
NFH28_RS16315 NONE
NFH28_RS16320 NONE
NFH28_RS16325 3286366 .. 3286393 + -13.6  -3.30597   TACCCCAGCCACCTT        TAAAAAGCTCGC TTCG GCGAGCTTTTTG         CTTTTCTGCGTTTAT 100 30
NFH28_RS16330 NONE
        miaB 3289904 .. 3289929 + -13.3  -3.23216   TGAAAAGGCAATAAT         GCCCGAT-GGCG CTA CGCCTGTCGGGC         TTCCTGGTCATGGCC  91 47
NFH28_RS16345 NONE
        ybeY 3291609 .. 3291641 +  -8.4  -2.57988   TGCAGAATAGTAGCT     TGCCGGATGGCGGCG CTTG CGCC-TTATCCGGCC      TACATTCATGCCTTT  63 31
        corC NONE
         lnt NONE
NFH28_RS16365 3295583 .. 3295599 + -12.3  -5.76949   GGCAACAATCTTCGA              GGGTAGC GCT GCTACCC              TTTTTTTTCGGAGTA 100 148
        gltJ NONE
        gltK NONE
        gltL 3297768 .. 3297789 +   -13  -2.90714   GCACTAATCTTCCCG           GCGCGCAC GTCAGA GTGCGCGC            TATCTCACGCTTTAC  86 34
        rihA NONE
NFH28_RS16390 3300088 .. 3300121 + -11.9  -3.51633   CAGGCGTGACATTGA     TAAAGATCACCACGCC AGA GG-GTGGTGTTCTTTA     TTCTATAAACTCTCT  88 32
NFH28_RS16395 3301828 .. 3301842 + -12.8  -3.65529   ATTGACGAGCCGAAA               GCGCCG TAA CGGCGC               TTTCACTACCCCTGT  95 17
NFH28_RS16420 3307463 .. 3307483 +  -4.6  -2.74012   AATCCCACCACTTCG            CCACTGTG ATACA CGCCGTGG            TGATTCAAATCCTGG  45 197
        leuS NONE
        lptE NONE
        holA NONE
        nadD 3317542 .. 3317555 +  -2.3  -4.07885   CATTGCGCAGCGCCG               CCAGC AGAC GCTCG                TTTTGCGCAGCGCTG  56 44
NFH28_RS16475 3319341 .. 3319357 +  -5.1  -3.78934   GGTTTCGCCCATTGA              CAGCC CCCGACA GGCTG              TTATTCTCCGCAGCC  59 69
        rsfS NONE
        rlmH NONE
        mrdA NONE
        mrdB NONE
        rlpA NONE
        dacA 3326019 .. 3326049 + -13.5  -5.82316   TATACTATGCATCAG      TAA-AACTCCCGCC CTGT GGCGGGAGTTGTTA       TTTTTTTTACGTAAT 100 76
        ybeD 3326349 .. 3326363 +  -2.1  -3.31461   ATTGTAATACATCCA              GA-CGG TTAC CCGGTC               TTATCCGGGTAACTC  45 34
        lipB 3327215 .. 3327229 +  -8.6  -3.10597   GCATGGCCTCTTCAG               TCCTCA TGA TGAGGA               ATTTTCCGTGAACAA  66 159
NFH28_RS16520 3328409 .. 3328433 +  -4.9  -3.38768   ATTTTACATTTTGCC          GGGCTGTCAGG CTG CTTTATGGCCC          TTATCAATGATATAC  54 98
        lipA 3329544 .. 3329558 +  -8.5  -5.58454   TTCAGGCAAAAAAAA               CCGGC AACTC GCCGG               TTTTTTTACTCTGCG 100 62
        crcB 3331200 .. 3331216 + -10.8  -4.20042   TAAGCGCAAAAAAAA              CCCGCC GAAAG GGCGGG              TTTTGAAATCTTGCT  88 38
        dcuC 3333988 .. 3334018 + -13.9  -3.02043   GGCTGATAGCCGGTA       AGCCGGGGCGAGG GAAAA CATCGCCCCGGCA       TCTTAAACCAGGCTT  87 35
        citC NONE
        citD NONE
        citE NONE
        citF NONE
        citX NONE
        citG NONE
        citT 3343493 .. 3343518 + -15.5  -5.37345   GCAGGTTAAAAATGA         TGCCGTTCAGG TTCA CCTGAGCGGCA          TTTTTTATGATTAAA 100 54
         rna 3344534 .. 3344556 + -12.7  -5.07652   ATCATGAGAGTTAAA           CCCTCGCCG CCAGA CGGTGAGGG           TTTTCTTTTGGGACC 100 179
         rnk 3345058 .. 3345077 + -12.2  -3.75897   TAATGCGTTTACACA            GAGGATGC CTGC GCATCCTC             TTTCCGTTAGCCCTT  93 58
        uspG 3347021 .. 3347047 + -20.2  -4.75372   GCTAAAAACTTACAC         GCCCTGCCAGGT CAC GCCTGGCAGGGC         TTTTTACTGCATCAT 100 49
        dsbG NONE
NFH28_RS16660 3356448 .. 3356458 +  -2.6  -2.69964   ATCCTTTATGTTAAT                 TATT TCG AATA                 TACTGTAGTTAACAC  41 147
NFH28_RS16665 NONE
NFH28_RS16670 3358645 .. 3358667 + -11.9  -3.01712   GGCGCGCAGCATATC           CGCCAGCGC CAGTT GCGCCGGCG           TATTGACGCAAAACG  76 353
NFH28_RS16680 3360949 .. 3360973 + -12.9  -3.19602   ACCTGTCATTCAAAT          GCCCTCTCC TTATTCT GGAGAGGGC          TATTGATGTAAAAAG  91 281
        fepB 3369387 .. 3369437 + -13.5  -3.14211   TGTTTTAGCCTTATC GGAGT-CTTATCCGACTGACCAGA CCGA TTTGGTCAGTCGGATAAACGCCCC TTCATCAGCCAGCAT  93 33
        fepD NONE
        fepG NONE
        fepC 3373605 .. 3373624 + -12.2  -4.14739   CACACTGATGACAAA            GCCGGATA TCGC TATCCGGC             TTTTCGGGTAAATCA  93 46
NFH28_RS16765 3382856 .. 3382867 +  -4.4  -3.11289   GGAATTGGCAAAAAC                GATG CTGA CATC                 TCATTTTCCCCTTCC  49 70
        entD NONE
NFH28_RS16775 NONE
NFH28_RS16780 3385138 .. 3385170 +  -4.9  -4.29845   AATATCATACACCTT     CTGGTCGGTGT-CGA GCAGG TCGCGCGCCG-CCAG     TTTTAGCTTCCGTTC  66 157
NFH28_RS16790 NONE
NFH28_RS16795 NONE
        nfsB 3387354 .. 3387371 + -12.7   -5.1361   TAATCCCCTGCCTAA             GCCGGAC GCCC GTCCGGC              TTTTTTCACCTTTCT 100 38
NFH28_RS16805 NONE
NFH28_RS16810 NONE
NFH28_RS16815 NONE
NFH28_RS16820 3390034 .. 3390048 +  -3.4  -3.53444   TTGGGCTTCTTGCCA               GCGCGC TGG GCCTGC               TTTGACGAGAGGTAA  50 6
NFH28_RS16825 NONE
NFH28_RS16830 3392273 .. 3392288 + -11.8  -4.66609   AGGTCTTTCTTCTGC              GGGGCG CTAG CGCCCC               TTTTTCCCTGAACTA 100 116
NFH28_RS16845 3399196 .. 3399212 +    -8  -3.05844   GCCTTGTACGGACAG              GCCGAA CAGCA TTCGGC              TATTCGAATAAACGC  60 487
NFH28_RS16855 3402107 .. 3402121 +  -4.2  -2.63549   TAGTTCGCCCTCATG               AGTCAG ATG CTGACG               ATATTCTTCCGGATG  44 461
        rclR 3405117 .. 3405161 +  -3.5  -3.28712   CGGACGATAAACGTA CG-CTG-AACCCGCCTGCAGT TTGAC GCCGCAGGCGGGGTGCACACG TTATGCCGCAAGGCG  48 31
NFH28_RS16890 3406434 .. 3406463 +  -9.4  -2.96009   TCTTCGAAAAACATG       CAAAGCCTTGCA AGCCGA TGCAAAGCTTTG        TGTGTCCCGTTTTTG  70 310
NFH28_RS16900 NONE
NFH28_RS16905 NONE
NFH28_RS16910 3409586 .. 3409618 +  -9.1  -3.20858   ATGTATAATTAATGT      TCCCCGCCACC AATGGGTAACG GGCGGCGGGGA      TTCCTACATATCGTA  70 46
NFH28_RS16915 3410657 .. 3410676 +  -2.2  -2.90763   AAAATAGACGACATT            TTTGGTGAT GAT GTC-CCAAA            TATGTCCCATATGGA  41 512
NFH28_RS16940 NONE
        fimY 3413077 .. 3413088 +    -3  -3.59781   ATTACATAACAAATA                CTAA ACAA TTAG                 TCTTTCATATTATTT  50 226
        fimZ 3414484 .. 3414496 +  -2.6  -4.37092   GCGTAGCGTCACCGG                CGGC GTGAA GCTG                TTTTGTCGGCCAGGT  60 397
        folD NONE
        ybcJ 3421888 .. 3421921 + -12.5  -2.75307   TGGCCTGATACAGAG     TGCCGGATAGCGACGC AAA GCGTC-TTATCCGGCC     TGATTACGCTGTCTT  82 33
NFH28_RS16995 NONE
NFH28_RS17000 NONE
NFH28_RS17005 3424227 .. 3424249 +  -5.5  -3.97368   CGCGCTTCAAACGCC          TC-GCCGCCC GCCG GGGCCGCTGA           TTTATCCGTTCCACG  63 448
        ppiB NONE
        lpxH 3426721 .. 3426731 +  -2.4  -4.08394   AAGCAGCGTGTCCCG                 CACC ACA GGAG                 TTTTAAGACGCATGT  55 121
        purE NONE
        purK 3428380 .. 3428394 +  -7.1  -2.80816   AGATGCAGGTTCCCG               CCCTG CCCGC CAGGG               TATCATCAATACGCG  58 89
        allD NONE
        allC NONE
        allE 3436490 .. 3436509 + -13.6  -5.71983   GCTATGTTGGATTTT            GCCACGGT GAGA ACCGTGGC             TTTTTTTATGCTTAA 100 74
        allS NONE
        mnmH 3450695 .. 3450720 +  -6.1  -3.35197   TAGCTTACTTTTATT         GCCGGCT-GACG CTA CATTGAGCCGGC         TTAGTGTCTGTCGCG  59 38
        tesA NONE
NFH28_RS17165 NONE
        cnoX 3460717 .. 3460737 +  -3.9  -3.39521   GCCCGGCGGAGGCCA            TTTTCGGCG TTG CGCCCAAAC            TTAACTTTTCCTGGA  49 389
NFH28_RS17185 NONE
NFH28_RS17190 3463772 .. 3463784 +  -5.5  -5.40474   AACCGAATGGCTTTG                CTGGT TAA ACCGG                TTTTTTTCGCCACAT  95 402
        copA 3466430 .. 3466459 + -18.1  -3.62597   AAAGCGTAAAAACGC       TATATCAGGCAGC ATCA GCTGCCTGATATA        TTATTAAGCCATCAG 100 32
NFH28_RS17205 3467431 .. 3467445 + -12.8  -4.36914   GTTGACGTCCCGTCA               GGGCGC ATT GCGCCC               TTTTCTCCAACGCGC 100 52
NFH28_RS17210 3468342 .. 3468361 +  -3.4  -3.11291   CATCGTTATTATTAT            CCCGACGC TTTC GCTTCGGA             TCTTCAGATTGTCGC  45 83
        ybaK 3469362 .. 3469372 +  -8.2  -3.89956   AGCTGTGGATAGGCG                 CCGG AGT CCGG                 TTTCATCTGTGCTAC  71 422
NFH28_RS17225 3472210 .. 3472220 +  -3.2  -2.98592   CATACTTATCACTTT                 TACG TTC CGTG                 CTCTTTTTGCCTTCA  45 108
NFH28_RS17230 3474440 .. 3474461 +  -4.3   -4.4518   AATTCAGCAATAGCT           CCCGGTAGC AGCG GATGCTGGG            TTTTACGTTTTGCTT  68 447
         aes 3476524 .. 3476569 +  -2.5  -5.00616   TGAGTTTCAGCATCA TATCAATATGTTCCGGCGTCG CGTT CAGCGCCGGAATGTACGCATA TTTTTTACCGCCCGC  74 54
        priC NONE
        rsmS NONE
NFH28_RS17295 3486437 .. 3486477 +  -3.9   -4.2803   CTACGCTTTCGCATT AGC-G-GCGCCGCGCGC ACTCATAAA GCGCGCGGCCCACCGCC TTTTAGCTTGCCGTA  62 24
        acrA 3491929 .. 3491943 +  -2.8  -3.14878   GCAAGCGGTGATCAA               CCTG CTCAGCC CAGG               TCTTAACTTAAACAG  45 5
        acrB 3495140 .. 3495155 + -11.8  -5.00616   GCTCACTGTTGATAA              GGCCGC GCAA GCGGCC               TTTTTTACGCAAAAA 100 44
        tomB 3496005 .. 3496021 +  -2.3  -2.79133   AAAAATTATTACAAT              CATAGGT AGA ATTTATG              TCTGATAAACCATTA  40 39
         hha 3496349 .. 3496360 +  -5.8  -2.91869   CACATAGCAATAGCA                GGGA ACGT TCCC                 TCTAATACTTTATTA  51 137
         maa NONE
NFH28_RS17335 3497562 .. 3497585 +  -8.1  -2.94322   GCCGGTAATAAAAAA          GTGCGCACC CTCCCT GGTACGCAC           TGCTTTCCCTGAACT  61 33
NFH28_RS17350 3500012 .. 3500028 +  -2.9  -4.16842   GCAATTGCAACCCAT              CAGGCAT CGG ATGCTGG              TTTCTTGCGCATCCG  58 246
NFH28_RS17360 3500739 .. 3500752 +  -2.3  -4.56597   GGCGCCTGTTTACCT               TCGGT ACGT ACCGC                TTTTTGCGACAGCAC  65 353
        tesB 3502095 .. 3502109 +  -9.2  -3.17212   CACAATTAAAAAACA               TGCCGC TAT GCGGCG               TTAATGGCCTGATGA  70 32
        cdsH 3509286 .. 3509304 +   -16  -4.62069   AAACCAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCAGATGCGCC 100 41
NFH28_RS17415 3512688 .. 3512699 +  -2.2  -3.15663   TACGCGTTACCATAT                TGGC TTTC GTCA                 TTGATCAGGATAACT  44 63
        queC 3513720 .. 3513737 +  -5.5  -3.15396   CAATAGATCGCTCAA             TACCGCC GGGC GACGGTA              ATTTATATTGATGTT  50 335
NFH28_RS17470 3524977 .. 3524992 + -11.8  -2.92091   ATAGCAACAACAAGA              CCCGGC AGAA GCCGGG               TCTGTAGATGCCTAT  80 40
        ampG 3526708 .. 3526720 +  -6.3  -3.35996   TGTTTTATTTTTACA                TTGGT TAT ACCAA                TTATCCCTCAACATC  59 252
        cyoA NONE
        cyoB NONE
NFH28_RS17490 NONE
NFH28_RS17495 NONE
        cyoE 3531749 .. 3531769 + -11.1  -5.68039   TTGCTATTGAAAAAA            CCGCCGTGT CAC AAACGGCGG            TTTTTTTATCCATTT 100 47
NFH28_RS17520 3537192 .. 3537202 +  -8.2  -3.29461   AACGAGACTCAACCT                 CGCG AAC CGCG                 TTATCCACACCGTTA  62 491
        panE NONE
        yajL 3538967 .. 3538981 +  -7.1   -3.2614   TACGGGCGTTCGCCC               TGCGC CAGAC GCGCA               TTAATATGCGCAATC  62 138
        phnR 3541816 .. 3541826 +  -3.2  -2.53379   ATAAGCGCAGCATCA                 TCCG GCG TGGA                 CTGATTTATTTCTCT  42 109
        phnS NONE
        phnT NONE
        phnU 3544919 .. 3544929 +  -5.4  -2.84602   ACCGGCGTAAGGAGC                 TAGC CAT GCTA                 ATTTGGTCACCTAAA  51 23
        phnV 3546105 .. 3546135 +  -6.2  -4.37711   ACCTTATCGAGAATA       CTGAAGTCGAAG TTTTCTT CTTCGGCTTCAA       TTTTCGCTTTAATGG  73 409
        xseB NONE
        ispA NONE
         dxs NONE
NFH28_RS17595 3551842 .. 3551857 +  -4.6  -3.25472   CAGACAATACTGCCG              TGGTCG TGTA CGCCCA               TATCTTTCGCCGTCT  49 385
NFH28_RS17630 3556628 .. 3556638 +  -6.8  -4.21812   CGAAATATTTAGAAA                 CGCA AAT TGCG                 TTCTTTTCACTCCCG  72 272
NFH28_RS17635 3557556 .. 3557579 + -12.4  -2.72144   CTAAACCTGCAAAAA          AGGCCAGAGG TCGT CCTCTGGCCC           GTTTCGGGCGCATGC  82 37
        impX 3558161 .. 3558175 +  -2.8  -5.06961   GCACCAACAGCTTTG               TCAGCA GTC TGCTTA               TTTCTTTTTGTTCAT  73 261
        acpH NONE
NFH28_RS17690 3567027 .. 3567044 + -12.7  -5.28176   AGTGCATTGATAAAA             GGCTCGC GAAT GCGAGCC              TTTTTTATGCGTAAG 100 44
        sbcD NONE
        sbcC 3578979 .. 3578993 +  -5.6  -4.64861   AATTCACAGCCACAG               CGCGCA ACA TGCGCC               TTTATTTTCGGCAGG  74 164
        araJ 3580319 .. 3580330 +  -5.8  -3.29144   AACGATTTCATCAGC                GACG GAAC CGTC                 TTGTACAGGCGCTCA  54 159
        rdgC 3582352 .. 3582366 +  -4.2  -2.95223   CGTCATCTCTTCGGG               TTCGGC GGT GCCAAA               TGTATACTCCCCTTC  46 225
        proC 3585831 .. 3585873 +  -2.8  -4.18676   TAAATCCTGAAGCCC GGCTGGACGTCATGCCGCCAC TTCG GTG-CGGT-T-ACGTCCGGCA TTCTTTGCTTTGTAA  58 31
        ddlA 3591546 .. 3591573 + -12.8  -3.70674   CGATGTAATAGCGCA        CGCCCGAT-AGCG CAA CGTTTATCGGGCG        TCTTTTACCTCATCC  95 33
NFH28_RS17810 3592505 .. 3592523 +  -8.8  -4.13767   CCGGGCAACATTTCC             CGCGCAAG CGT CTTGCCCG             TTTTGGCCTCGGCCA  80 175
        ampH 3596229 .. 3596264 +  -3.9  -5.19251   TCCTGCATCCTGAGT    CGTCGCGCCTCGCGCT ATATC AG-ACGAGGCGCAACA    TTTTTGTTAATATTC  79 28
        hemB 3601414 .. 3601432 + -13.8   -3.5936   GTTAATTCTGTTACA             GGGCGGCG CGC TGCCGCCC             TTTCCCGACTTTACA 100 36
        prpR 3609086 .. 3609110 + -12.2  -4.91511   TGCCAGGAATAAATA         TACCCGCC-GG AAAC CCAGGCGGGTA          TTTTTATGATGCAAT 100 117
NFH28_RS17875 3610604 .. 3610619 + -10.4  -3.05816   CACATCGTAGCTTAG              CCAGGC GCTG GCCTGG               TTCCGTGGAGCATAA  69 360
        mdsA NONE
        mdsB NONE
        mdsC 3632661 .. 3632710 +  -9.7  -3.10344   AGAAAAAGCAAGGTT AGCCCAAATAGCGCCCGCGTCGC CAGT GCGGCGCGCGCGCTAAACAGGCA TATATTACCTGCAAA  71 24
NFH28_RS18000 3640690 .. 3640715 + -13.3  -4.19817   AAATAATTGTCGCTA         CGGTCTGGCGT TGAA ACGCCAGACCA          TTTTCAATCGCTAGG 100 35
        stbB NONE
NFH28_RS18010 NONE
        stbD NONE
        stbE 3646275 .. 3646293 +  -3.2  -3.63991   ATTATCTGATTCAAT             TAATGTGT AGA ACGTATTA             TTATTACGCATCATA  51 198
NFH28_RS18030 3647981 .. 3647999 +  -3.1  -3.09286   TCCACCAGATCCACT             TCACGAT CCGTT AGCGTGA             GTTTTACCGTAATAT  45 496
NFH28_RS18080 NONE
NFH28_RS18085 3658731 .. 3658756 + -16.3  -3.14976   AATCAAATAGATAAA         TAAACGGCTGC ATAG GCAGCCGTTTA          TAATTTATGTTGTTA 100 31
NFH28_RS18330 3692214 .. 3692230 + -13.7  -4.75404   ATAGATAGTAAGTTA              CCCGGCA CCA TGCCGGG              TTTTTACTGCCCTTT 100 37
NFH28_RS18340 3693208 .. 3693237 +  -8.7  -5.06816   CTCACTACAAAAGAA       CATTTCCATAACC GGAG GGTTATTGAAGTG        TTTTTGTTAGGAGGT  91 77
NFH28_RS18345 NONE
NFH28_RS18355 3694629 .. 3694650 +    -8   -5.4251   TATTGGAAATCTTCT           TTGCCCTC CAATGT GAGGGCGA            TTTTTTATCTGTGAG  95 339
NFH28_RS18360 NONE
NFH28_RS18365 NONE
NFH28_RS18370 NONE
NFH28_RS18375 3696388 .. 3696400 +  -6.3  -2.83403   AGACTGGAATCGAAA                TCATG CAG CATGA                ATTTAGTGACGAAGA  53 13
NFH28_RS18380 NONE
NFH28_RS18385 3697243 .. 3697269 +  -5.2  -2.70932   GGCCTAAACATAAAT         CAGTTTTATTAC ATA GCAAAAAAACTG         TCATTAAAAACGGCA  49 121
NFH28_RS18390 NONE
NFH28_RS18395 NONE
NFH28_RS18400 NONE
NFH28_RS18405 NONE
NFH28_RS18410 NONE
NFH28_RS18415 3700017 .. 3700028 +    -3  -2.91383   GCGCCTAAGGTGGAT                GATT TATG AATC                 TATATCGCTGCCCAT  42 17
NFH28_RS18425 3700389 .. 3700402 +  -8.1  -5.18371   TTTCTTTTATCTGAA               CTCGC TACG GCGAG                TTTTGTTTTATGGAG  91 90
NFH28_RS18430 3700585 .. 3700598 +  -9.5   -5.4505   TGAAAGAACACCAAG               CCGCC TGAT GGCGG                TTTTTTATTGGAGAC 100 18
NFH28_RS18435 NONE
NFH28_RS18440 NONE
NFH28_RS18445 3702793 .. 3702845 +  -9.3  -2.84098   AAGGTTAAAACTAAC CGGGCGGTGCGTCAATAGCC--TTG CTACT CAACCGGCTATTTTTGCACCGCTCG TCATTAATTACGCAC  67 171
        phoE 3706576 .. 3706603 +  -6.3   -3.2964   CATTGTGCCTGATGG        CGCTGC-GCCAT CAGGC ATGGCAGCAGGG        TTATGCCGACAGTTT  59 48
        pepD 3710915 .. 3710951 +  -9.5  -4.66318   ACCTTCACGCTAATC   CCG-CTCGCCAGGTGCG TGGCC CGCAC-TGCCGAGTCGG   TTTTATTAACGTGCT  91 380
        dpaA 3714733 .. 3714754 +  -8.7  -3.91798   AATAACGCCCATTCG           CCTGGCATA ATCT TTTGCCAGG            TTTCATTCCCCGTTA  73 36
        fadE 3718955 .. 3718972 + -14.1  -5.08088   TCTCGTGTCTTTCCT             GCCCCGC TTTC GCGGGGC              TTTTTCTTGCCGCTT 100 45
NFH28_RS18525 3719816 .. 3719836 + -11.8  -2.97676   TCACCTTGTAAGCAA            CCTGCCGC TCACC GCGGCGGG            ATTGTTTCACTCCGT  80 30
NFH28_RS18530 3720598 .. 3720621 + -11.8  -3.87815   TGAGTAAATATTTTT          GCCCGTTATT CCGG GATAACGGGC           TTTATCCAGGTCGGG  93 34
        pagN 3721870 .. 3721916 +  -8.7  -2.55544   TCATGTTTTGTATTG GGCATCGTCAAAAGACGACTGG CTGA CCAGTCG-CATATCTCGATGCC TCAATTCAGTCATCA  63 256
NFH28_RS18585 3731192 .. 3731207 +  -3.2   -4.9138   CTTTTACACATTATT              CATCCG GTTC CAGATG               TTTTGTTTCAATCCT  72 139
NFH28_RS18600 3732215 .. 3732240 +  -5.5  -3.90163   ATTAAATAATAAAAT         CCGGG-AAGA CAAAAGA TCTTTCCCGG         CTTTTTATTTTCATT  63 36
        tagK NONE
NFH28_RS18740 NONE
        tssE NONE
        tssF NONE
        tssG NONE
NFH28_RS18760 3767093 .. 3767117 +  -8.6  -5.95166   GAAGACGAAAAAAAA          CCGTATCCCT TTTAC AGTGATACGG          TTTTTTTTACTTCAC 100 275
        rnhA 3768627 .. 3768644 +  -2.6   -2.7976   ATAGTGGCTACCAGG             CGGAAG CTTAGC CATCCG              GTTTGCGATATTGCC  41 15
        gloB 3770176 .. 3770188 +  -3.3  -2.93623   CATTCGCTAACTTCG                CCGTT ATG ATCGG                TCGTCTTTTAAGCAA  44 55
        mltD 3771610 .. 3771630 + -11.1  -4.31085   ACGAAAAAGCCAAAA            GGCGCCG CTTCCCC CGGCGCC            TTTTAAATTGCTATA  90 50
        yafC 3775734 .. 3775747 +  -8.1  -3.35088   CATCCAGATGCAGAT               CCTGC GCCA GCAGG                TTGCTTGCCAGATTT  64 144
        metN NONE
NFH28_RS18860 NONE
        metQ 3785914 .. 3785931 + -12.7  -3.64915   TGTAATATTATTCAG             GACGGGC TATT GCCCGTC              TTGTCATTTATGCAA  95 63
        rcsF 3786379 .. 3786403 +  -2.1  -2.90349   TGTATCGGGTCCGCC          CTGAATATTTC GGC GAAATGAGCAG          CTTTCAGTTTGAACA  41 5
        tsaA 3787166 .. 3787184 + -13.2  -3.13343   TCACTTTTTTTGTAT             CAGGCTCA CAT TGAGCCTG             TTCGATCGTTCAACT  91 88
        proS 3788980 .. 3789000 + -16.9  -4.72497   CGGCAGATATGTAAA            GGCCTCGCA CCC TGCGAGGCC            TTTTATTAGTGAGTG 100 73
NFH28_RS18900 NONE
         rof 3791552 .. 3791583 +  -3.7  -5.04868   CGGCGTGGTATCTCG     TC-GCCAGG-GCGGG ATCC CCTGCTCCTGCCAGA      TTTTCTTTAATTTAC  77 229
         map 3818528 .. 3818558 + -16.3   -4.7497   AAGATAAATACGTAG      GCCGGATAA-GGCG TTCA CGCCATTATCCGGC       TTTTTAATGGGTGGC 100 212
        glnD NONE
        dapD 3822118 .. 3822133 + -11.8  -2.84878   AAGCGAGTGAAAAGC              GGGGGC GACA GCCCCC               CTTTGCATTACGGCG  80 39
NFH28_RS19035 3824060 .. 3824077 +  -5.6  -3.09452   AGCCGATCTGGACAA             GCTTAC CCGTAA GTAAGC              TGTGTGTTGCCGGAT  52 10
        mtnN NONE
        btuF NONE
NFH28_RS19065 3831023 .. 3831037 +  -5.6  -4.68994   CATCGGGTCAACCAC               CAGGCC AAC GCCCTG               TTTTTCGATGGTCAT  76 264
        hemL 3834209 .. 3834234 +  -7.6  -6.23209   CAGAAACAACGTAGG        CCGGGTAAGGCG AAGC CGCC--ACCCGG         TTTTTTTTTGGTTCA 100 52
        thpR NONE
        sfsA 3854403 .. 3854414 +  -5.8  -4.25283   GTATTCTGGCCGCGT                GCGT AAAT ACGC                 TTTTCCTCACAGGGT  67 64
        dksA 3855026 .. 3855043 + -12.7  -4.21772   ACCCTATTTATGACA             GGCGGGA GTTT TCCCGCC              TTATTCTTTATTGCC 100 55
      gluQRS NONE
        pcnB NONE
        folK NONE
        panB 3858932 .. 3858944 +  -9.1  -3.30124   ACCGTGCCGGATGGC                GACGC GAC GCGTC                TTATCCGGCCTACAG  71 49
        panC NONE
        panD 3860496 .. 3860514 +  -4.4  -3.79533   TCTCACCGTGGTTAC             CGCCAGAT GGA AACCGGCG             TCTTTTGCTGCTTTG  58 158
NFH28_RS19205 3863016 .. 3863037 + -11.5  -4.68209   ATATAACTGATCCTG           GTGGCCAGC GTCG GCTGGCCCC            TTTGTTTATTGAGGT 100 31
        stiB NONE
NFH28_RS19215 NONE
NFH28_RS19220 3867397 .. 3867410 +  -3.8  -3.27525   CTGGAGATTCAGATT               CGCT GAGAGA AGCG                TTGGGTTTCGACAAG  48 20
         can 3869998 .. 3870030 +  -8.4  -2.95459   AGCCATTAGCTATAG     GCCGGAT-AAGTCGC TTTA GCGACGCCATCCGGC      ATTTCTGCGCTTACT  65 40
NFH28_RS19245 3873181 .. 3873200 +   -15  -3.30124   CGAAATAACCATTAA            TGCCCGGC GTAT GCCGGGCA             TTGTGCCGGGTGGCG 100 33
NFH28_RS19255 3875438 .. 3875457 + -12.2  -3.71487   CTATTGCTGAAATAA            TGACCGTG CATC CACGGTCA             TTGTTAGCTATGATG  89 53
        speE NONE
        speD 3877169 .. 3877189 +  -6.1  -2.71731   CGCGAGATTTACTAC            GGCCGCA ATATTTC TGCGGTC            TGATTCACCACTGGC  53 2
NFH28_RS19295 3883064 .. 3883079 +  -4.6  -3.57144   CGTAGGTCTGGTACT              CTTCCG GCGT CGGCAG               TTTGCCGATCAGCGC  52 211
NFH28_RS19305 NONE
NFH28_RS19310 3888487 .. 3888510 + -10.3  -2.67694   TGCCGGAATTAGCCG          CCCATACGC CTTCAT GCGTGTGGG           TGATCTGCTGATGCT  66 161
        aroP 3898031 .. 3898054 +   -16  -3.51924   GTGGCGTTACTTTTC          CGCCCTCCCC GTCC GGGGAGGGTG           TTATCTGCCTCACAG 100 43
NFH28_RS19345 NONE
NFH28_RS19350 3900702 .. 3900716 +  -3.4  -4.17701   TCTTCGCCATCGACA               CCGCCG CTT TGGGGG               TTTCTACTTTGTCAG  58 194
        nadC 3903030 .. 3903052 +   -17  -2.91582   TGCTGATCCTCTCCA           CCCGATGGCG CTG CGCCGTCGGG           TCTATAAATCACCTG 100 35
        ppdD NONE
        gspE NONE
        hofC 3906309 .. 3906323 +  -3.6  -3.71848   ATATTAGAGGCTATT               GAAAAT GCG GTTTTC               TTGTTCCTGCACCCG  53 68
        coaE NONE
        zapD NONE
        yacG 3909275 .. 3909304 +  -4.9  -3.35996   AAACGTAGCCGCCAC       TGCGCCAGGGT GGATGAAA ACCTCGGCGCG        TTATCACTGACCCTA  54 170
        leuL 3937591 .. 3937608 + -14.1  -5.64274   CGAAGTCAAACAAAA             CCCGCGC CGTT GCGCGGG              TTTTTTTATGCCTGA 100 48
        leuA 3939212 .. 3939224 +  -3.3  -2.62263   AAATAAAGAGAACAA                CAAGG AAA CCGTG                TAATGTCGAAGAACT  42 10
        leuB NONE
        leuC NONE
        leuD 3942452 .. 3942470 +  -8.8  -5.28826   CTCATCAGTCGCTCA             TGCCGGGG ATA TTCCGGCA             TTTTTTATACGATTT  95 140
        sgrR 3944672 .. 3944696 +  -7.2  -3.62518   ATAATGCCGGCGAAG          GGATTTGAGG CTACC TCTCAAGTCC          TTTGCCACTCTTTAA  67 151
        thiB NONE
        thiP NONE
        thiQ 3948466 .. 3948482 +  -6.5    -3.273   GGATCGTGAACATAC              TGTGCTG ATG CAGCGCG              TGTTCGGTTTTATCC  56 507
        araB 3951810 .. 3951820 +  -2.4  -3.48529   GACTCATTAAGGACA                 CGAC AAT GACG                 ATTTTTGATAATTAT  47 31
        araA 3953327 .. 3953348 +  -4.3  -3.53811   CGTTAATTGGTGAAA           CGGATTGCC CGGT GGCACTGCG            TTTACCGGGCCTACG  54 35
        araD 3954166 .. 3954185 + -12.8  -3.20858   TAATGCCTCTAAAAA            CGCGTCCC ATGG GGGGCGCG             TTGATGAATCTGGTC  86 38
NFH28_RS19605 NONE
        polB 3958375 .. 3958404 +  -3.5  -2.66435   CCTGGACCTAATTAA       CGCCACTACCA CATTAGCC TGGTAGCGGGG        TCGTATACTCGCAAT  42 88
        rapA NONE
        rluA 3962371 .. 3962409 +  -8.7  -3.21099   GGCATCTTCCAGCGT  CGGGCCGCGCTGCGCCTG CTGC CAGCCGCCGC-CGGACTG   TTGATGATAACCGCC  65 333
        lptD 3965607 .. 3965617 +  -8.2  -3.35813   GATTTACAACGTAAT                 CCGC ATT GCGG                 TTAATTGAAATGGAA  65 48
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH 3969994 .. 3970049 +  -9.1  -3.53811   TGCCTGATGGCGCTA CG-CTTATCAGGCCTACATCTGGCGAC ATCT GGCTCAAGA-GTAGGCCGGATAAGGCG TTTCGCCGCCATCCG  73 49
        srfN 3977006 .. 3977017 +  -3.6  -4.11371   AAATGCTATCACCAT                GGGT CCCT GCCC                 TTTTACCCCCTCTTG  60 408
        caiT NONE
        caiA 3985918 .. 3985951 + -13.1   -2.8294   TGATAAGACGCGGGG     CGTCGCCATCAGGCA ATCA TGCCGGATGGCGCTG      TGCTTATCCGGCCTA  85 58
        caiB 3987211 .. 3987257 +  -7.3   -3.6682   GGCCAAAGTTGAGGA TTAAACGCGATGCGCTAATCGG TTTT CCGGTTAGCGC-TCACGCCTGA TTTCAGTGGATAAAG  67 22
        caiC 3988832 .. 3988862 +  -5.3  -2.76418   AAAATCTGAAATAAA       CCTTCCGGCAGGA ATCCC TCCCGCCGGAAAA       CTATTTATCTGGAGA  49 27
        caiD 3989695 .. 3989737 +  -7.8  -2.60496   CCGGATGGCGCTTCG CTTATCCGGCCTACAG CACATGCGCAA CCGTAGACCGGATAAG GTGTTTACGCCACCA  59 51
        caiE 3990591 .. 3990612 +  -5.1  -3.53224   TCAATCGGCGATAGA           GTTGAGAGT CGAT ACTCACGAC            TTTCACCAGACGCTG  55 242
NFH28_RS19765 3996482 .. 3996500 + -11.8  -3.99405   GGGGCAAAAACAAAA             GGGCAATA ATA TATTGCCC             TTTGTAATCAATTAA  93 78
        citS 4004346 .. 4004356 +  -2.4  -3.06696   TGATGGTGTAAAAAA                 ACGC ACG GCGG                 TGTCTTGGCAGCAAA  42 30
NFH28_RS19810 NONE
        oadA NONE
NFH28_RS19820 4007853 .. 4007875 + -12.1  -4.27192   CGATGTAATAGTGGA           TGGGATACG CATGT CGTATCCCA           TTTTCATCCAAATTT  95 33
NFH28_RS19825 NONE
NFH28_RS19830 4010628 .. 4010648 +  -3.2  -3.89346   AGTTTATTCAGAAAA            TCTGGCGA GAGCA TTGCCTGA            TTTGTAACGTCCAGC  54 366
        rpsT 4019145 .. 4019159 +  -8.5  -5.64274   AGCTTTGTAGAAAAA               CCCGC GTAAA GCGGG               TTTTTTTATGCCTGC 100 57
NFH28_RS19880 4020973 .. 4020986 +  -3.8  -2.91276   CCCTCGAATATGGGA               GGCA CCACCA TGCC                ATTTATGCAACAAGA  46 56
NFH28_RS19885 4023026 .. 4023058 + -14.9  -3.06492   TGAACTTGTAGAATG      ATTCCGGCTGCGG GTTAATA CCGCAGCCGGAAG      TATTACGGTAGGTAC  89 30
NFH28_RS19920 4032658 .. 4032690 +  -9.2  -4.74052   TTACTTAATTTCCCC      GGTTTGTAGTCGTG AATGA CACGACTACAGGCA      TTGTTTTTCTTTAAT  90 63
NFH28_RS19925 4034298 .. 4034328 + -16.3  -2.87274   GCAAATAAGCCATAA       TGTTATGCGGTCG ATAAC CGGCCGCATAACA       TACTTAGTTATGCAA 100 33
NFH28_RS19935 4037106 .. 4037123 +  -2.7  -5.16472   AAAAAGAAAGGTCGA             CTGAAAT GTTG ATATCAG              TTTTTTGACATTTTT  79 114
NFH28_RS19945 4038959 .. 4038973 +  -4.2  -3.49738   CGGTTCAGTCATAGA               CAATGC GTA GCACTG               TTAATTGCTTATCTT  52 136
NFH28_RS20010 NONE
NFH28_RS20015 NONE
NFH28_RS20040 4060524 .. 4060538 +  -2.8  -3.70022   GACTTAAAGTCATTG               GCGA CGATTAA TCGC               TGTTATTTCTATTCC  50 15
        msyB 4061295 .. 4061318 +  -8.2  -3.69395   GTGAATGCCCTCACT          GGGGGAAA TATTTTCT TTTCCCCC           TTATTAGATCATAGA  69 37
        satP 4062004 .. 4062036 +  -7.7  -2.67903   AGGCGCACTAAATCT      CTTTTATTCCTCCCG CAC CGGGAGGAATAACCC      TACTATCAGTATTTT  59 30
NFH28_RS20065 4065446 .. 4065468 +  -4.2  -3.05463   TCAACTCTGCGGCGT           TTTTTTGCTA AAG TCGCAGAAAA           TTCCCTGCAAGGACT  47 62
        yaaA 4066315 .. 4066354 +  -9.3  -3.62775   CAAATCGACACCACC CCATAG-GCCCGGTAAGCG ACAG CGCC-ACCGGGCGCAATGG  TTATTGGCGGGTCAT  75 79
        arcA 4073465 .. 4073491 + -13.1  -4.38927   GCCAAACTGTAAAAA         CAGCCGGTAAG TTATT CTTACTGGCTG         TTTCTTATGTCCCCC 100 53
NFH28_RS20110 4074045 .. 4074090 +  -8.9  -4.70046   TCCCGCCGGGAGGAG TTCCGGCAGGCGGCGATTTCGC TCA GT-AAAACGCCGCCCGCCTGCA TTTTGTACTTTTCTC  90 52
NFH28_RS20115 4075052 .. 4075067 +  -7.6  -3.04398   GACTGTTAGAGCTTC              GAAACC TGCC GGTTTC               ATTTTAAACGGACAA  60 3
        sthA NONE
        sthA 4076689 .. 4076705 +  -5.8  -2.59742   TATGGGATGAGTTTA              GAGCCG CATTC CGGTTC              ATTCTAGCCATTAAC  50 2
NFH28_RS20130 4079278 .. 4079294 +  -2.1  -2.64747   GGCGTAGAAATCTTA              CACGAGC AAT GCCAGTG              ATTCTGGTGGGATAA  39 8
NFH28_RS20135 4079886 .. 4079902 +  -2.2  -2.65504   CATCTTTCTATTTCA              CCTGGT ATAAA AGCAGG              AATTTTTCATGAGAA  39 41
        sthE 4081011 .. 4081047 +  -8.6  -3.41807   ACGGCATCACAGTTT   CTGGCGCTGCGCGGGAA AACG TTAACGCGC-GCGCCCG    TTAGATTTATTTCCA  69 40
        robA 4086575 .. 4086605 +    -6  -4.37886   AGGTGATATCACACC       CGCACGCCTGGG CGATAAT CTCCGCCGTGCG       TTTTGTGCGGCCTAA  73 459
        yjjX 4087403 .. 4087430 +    -9  -3.30124   CATCAGGCATTTCGC        GGCGATGTTGCC GGAT GGCCGCTTCGCC         TTATCCGGCCTACGA  71 79
        ettA 4091725 .. 4091757 +   -12  -2.74443   GTTGTGAAACTGTAG      GCCTGATAAGACGC GGTAA GCGTCGCATCAGGC      ATTGGTTCTTATCCC  79 102
NFH28_RS20210 NONE
        lplA 4097400 .. 4097433 + -12.7  -3.57144   TGTGCGCTAAATGAA     TAATATCAGAGAGAC GAAT GTGTCTCTGATATTA      TTTAAACATAACAAC  95 31
NFH28_RS20220 NONE
NFH28_RS20225 NONE
        stjC NONE
NFH28_RS20235 NONE
NFH28_RS20240 4102912 .. 4102943 + -10.1  -2.58491   GCTGACGAAATAAAC      GATGAAGGGGGCC TGCTCT GGCCCCCTTCACA       ATCTTACTCTTTATC  70 28
NFH28_RS20265 NONE
NFH28_RS20270 4110377 .. 4110393 +  -7.9   -3.6682   GCACCACACCGGTTC              GCGGCAG ATC CTGGCGC              TTTAAGTGCATCGCC  65 381
        rsmC 4117716 .. 4117728 +  -9.1  -3.30243   CATGTGCCGGATGGC                GACGC AAA GCGTC                TTATCCAACCTACGT  71 72
NFH28_RS20320 NONE
NFH28_RS20325 NONE
NFH28_RS20330 4118480 .. 4118491 +    -3  -3.92414   GATAATGATAACCAA                TATC ATAT GATA                 TATTTTCTCATTTGT  54 327
NFH28_RS20340 4119837 .. 4119847 +    -4  -2.76885   TATCGCTATCGATAG                 GATT AGC AATC                 ATTATCATTTAGATT  45 101
        fhuF NONE
NFH28_RS20350 4121774 .. 4121800 +  -6.4  -3.28745   ATTTATCGCCAGTTC         CGTCAGGCTGGA TAA TCCTGTCCGGCG         TTCAGTTCTTAACGC  59 520
NFH28_RS20365 NONE
NFH28_RS20370 4124646 .. 4124659 +  -3.7  -2.85545   CCCCCGCGTGTGATT               GGTGG AACG CCTCC                TGCTGTTCTTACAGG  46 28
        dnaT NONE
        dnaC NONE
NFH28_RS20385 4126741 .. 4126755 +  -4.2  -3.20751   GTTATTAGAATTGCA               GCAATG TGA CATCGC               TATTACATTGTTAGA  48 232
        opgB 4129186 .. 4129218 +  -7.8  -2.94099   CCATAAACTGGCGCA     CAG-GCCTGATAAGCG AAG CGCC-ATCAGGCACTG     TATATGCTACACGCC  61 103
        btsT 4141284 .. 4141312 +  -7.5   -4.3255   CCCCGGCTAGTGTAG       GCCGGATAAGGCG CAAGC CGCC--ATCCGGC       TTTATTCATTAACAG  77 67
NFH28_RS20440 4141516 .. 4141536 +  -3.2  -3.14344   TTACGGCGGCGATGG            CAAAGGCG GTATG CGCTGTTG            TTAATGGAGAGACTA  46 1
        yjiA 4142846 .. 4142863 +  -5.5  -4.33258   ATGCTGAGCACTCAG             CGCGG ATGCGTTG CCGCG              TTTATGTTTAACCAT  69 364
        hsdR 4148068 .. 4148084 +  -9.4   -2.5955   GTATCATCCCCGTTT              TCGCCG GATGG CGGCGA              TGCCTTATCCGGCCT  68 45
        hsdM NONE
NFH28_RS20475 4151215 .. 4151233 + -11.7  -5.38549   GACCTTTATTTTCAA             GCGCACC TTCCC GGTGCGC             TTTTTATTATTTCCC 100 39
        symE 4151774 .. 4151796 +   -12  -4.04295   AAACGCATAAAATAA           GCTGGCAAAG AAC CCTTGCCAGC           TTTAATTATAATTCA  93 39
NFH28_RS20485 NONE
NFH28_RS20495 4153203 .. 4153231 +  -3.8  -3.35046   GGCCGTAGTGGGAAT        CGTTGGCGAG TTTTACCGC CTCGTCATCG        TCTTTCACCACATAC  49 344
        mdtM 4156767 .. 4156800 +  -4.5  -2.73364   CCGCTGAGAAGTAAA     CACTCTGCCGGATAG AGGC TTATCCGGCACAGGA      TAATCTGATGTTTTT  47 27
NFH28_RS20515 4158178 .. 4158194 +  -9.5  -2.72144   ACCCCGCACGTGGGA              GGCATTA ATT TAATGCC              ATTTCCCACCGATGC  69 80
NFH28_RS20520 4159645 .. 4159679 +  -9.6  -3.78034   TCAAGGTAAAGATGC     CACTAAAAACTATA CTTATTC TATGGTTTTTAGTG     TTATTAATCTGCCTA  79 143
NFH28_RS20525 NONE
NFH28_RS20530 NONE
        iadA 4162733 .. 4162747 +  -2.8  -3.28924   CCGCTAGTTTCAGGC               TGCC CCATCAC GGCA               TTCTGAAAGAGGATG  46 44
        hypT 4163951 .. 4163979 +  -8.2  -4.37658   AATAAGGCTATCGAT       TTGCGGCAGC-AGC AGC GCTTGC-GCCGCAG       TTTTATCGCCACGTT  81 235
        trpS 4167099 .. 4167120 +  -4.3   -3.7642   CAGGTGCTGCCACAT           CGCCAGC TTCGCTGC GCGGGCG            TCTTTCTTAATTAAC  55 143
NFH28_RS20565 4168963 .. 4168973 +  -8.2  -3.66178   TGCGCCAGCATGAGA                 GGCG TTC CGCC                 TTTAGGATTGCCAAA  68 209
NFH28_RS20590 NONE
NFH28_RS20595 4174876 .. 4174905 + -10.2  -2.75343   CGATAACGTGAAGCA       GGAGGTATAGCCT ACAAG AGG-TATACCTCC       ATTTAAAAGTATCCA  71 35
NFH28_RS20600 4176150 .. 4176184 + -13.9  -3.89501   ACCTCTAATTATAAA     TTAAACAAATCTGTC TCTAT GGCAGATTTGTTTAA     TTTATAAAGCTGTTA 100 33
NFH28_RS20610 4177565 .. 4177579 +  -2.1  -2.75064   ATTCTGGAGGGACAA              CGGTGA TCGA TC-CCG               TGCTTGAATACCGCC  40 20
NFH28_RS20615 NONE
        brxC 4181834 .. 4181852 + -12.4  -3.61219   GTAACCCCCATTTCA             GGGCAGCG CTC TGCTGCCC             TTTGCAGGATTTTCT  95 37
        pglX NONE
NFH28_RS20630 NONE
NFH28_RS20635 NONE
        pglZ NONE
        brxL 4192576 .. 4192592 +  -3.6  -4.54047   TTCGCGGTCAGCACC              CGCAGG CGATA CCTGGG              TTTTATATCCCATGC  69 471
NFH28_RS20670 4199041 .. 4199054 +  -3.1  -3.58343   AGCTGACTTCTGACC               GC-CTG ACT CAGCGC               TTTGACAATGATCAG  51 28
        idnD NONE
        idnO 4201649 .. 4201666 + -12.7   -3.6581   CCAGGGAAATACGAC             GCAGCGC GTAA GCGCTGC              TATTTTGGCGCTAAT  95 41
        idnT 4202999 .. 4203010 +  -2.2  -3.41693   CGTACTGGCGCTGAA                TGCG GTTC TGCA                 TTAATTCATCATCCG  45 10
NFH28_RS20695 4204224 .. 4204261 + -12.1  -3.32647   CAGGCCTACGGGTCA   TGGTAGGCCTGATAAGCG CAG CGCC-ATCAGGCCTACGA   TTACTGTGATTACGA  85 173
        pepA 4208397 .. 4208433 + -11.6  -3.30124   TGATAAGGCGCATTA   GCGC--CGCCATCAGGCG TTT TGCCGGATGGCGCTGCGC   TTATCCGGCCTACGG  83 63
        holC NONE
NFH28_RS20725 4211908 .. 4211927 +   -15  -4.66609   ACAACATGAATTATG            GGCCGACG TAAA CGTCGGCC             TTTTTACATCAGATA 100 139
NFH28_RS20735 4213874 .. 4213901 +  -7.8  -2.71503   TTGCTGATATAAATA        ATCCCGGA-AACA TCC TGTTATCCGGGAA        TCACTTATTATTCAA  60 78
NFH28_RS20740 4214508 .. 4214525 + -12.7  -3.72576   GAGTGAGTTCTTTTT             GCCTGCC GCAG GGCAGGC              TTTACTCAGGACAGA 100 117
        argF 4217237 .. 4217255 +  -5.2  -4.46212   AACACCACAAAGTCG             CCTTCGTT CAG GACGACGG             TTTTCTCGTCGACGC  70 202
        arcA NONE
        arcC 4220441 .. 4220453 + -10.5  -3.63515   GGCTTTTTACCGGAT                GGCGG CTT CCGCC                TTATTCGGCCTACAG  78 41
        argF 4221548 .. 4221576 + -13.2  -2.62184   GGCGACTAATCCCAC        AGGATATGCGCC CTCGC GGCGCATATCCG        TGATATCAGGAGAGA  84 32
NFH28_RS20780 4223011 .. 4223021 +  -4.6  -3.48395   TGTAACGAGCCAGAT                 GGCG ACG CGTC                 TTATCTGACAGGACT  54 36
NFH28_RS20785 NONE
        pyrL 4223855 .. 4223870 + -10.4  -6.06723   AAAACCAATACCAAG              CCCCTC AATT GAGGGG               TTTTTTTTTGCCCAG 100 14
        pyrB NONE
        pyrI 4225304 .. 4225321 +  -3.4  -3.32844   ATTATGTGGTGCTGG             CCAACT AATTTG GGTTGG              TTATGAGATCCCGGC  48 18
        ridA NONE
NFH28_RS20815 NONE
        treR 4230942 .. 4230961 +  -5.6   -3.9344   TTCTTTCCGCTACTA            CCGGCGTT GATC AGCGGCGG             TTTGATCTTAGGCTT  63 517
        treC 4233731 .. 4233761 +  -3.9  -3.16921   CCTTATACGGATAAA       CGCCACAAACC TATTGACAC GGGCTGTGGCG       TTGCTCCAGGTTACT  48 49
        nrdD 4236317 .. 4236355 +  -8.9  -3.00946   CATCAGGCATCACAA  TGT-TGCCGGATGCGGTG CAAG CACCTTATCCGGCCTACA   TGCTTTCTGGACACC  68 88
        nrdG 4237199 .. 4237217 +  -7.4   -4.1899   ATCAATGCATCTTCA             CTGTCGCT AAG AGTGACGG             TTTTCACTGGCATGC  74 385
NFH28_RS20915 4247703 .. 4247721 +  -5.9  -3.53811   CGTCCGAGTAGCTCC             CGCTCGA TCCGC TCGCGCG             TTTCCACCGCCTGAA  57 100
        iolC 4256408 .. 4256436 + -16.7  -3.02043   ATGCCTGCCTCATCA        CGCCCCGTGTCTG CAT CGGACAAGGGGCG        TGTTCAAGGACGATT 100 40
NFH28_RS20950 4258033 .. 4258044 +  -7.2   -4.1552   TCGGCTCAAAGGCCA                GCCG CATC CGGC                 TTTCTTCCGCCACTG  74 438
NFH28_RS20980 NONE
        iolA 4264856 .. 4264866 +  -6.8   -3.2048   TCGGAGTTCAGTATG                 CCGA CTC TCGG                 TTAATACGCTTTCAG  59 11
        iolB 4265726 .. 4265748 + -12.7  -5.46657   GTTGAGTGGTACTTT           GCCAGCCGT CCTCT GCGGCTGGC           TTTTTTATTCAACTC 100 47
       iolT1 4269395 .. 4269430 + -12.8  -5.53991   GATTAAGTTTCACCA    CAATGCCGATGATCG CTAAATA CGATCATCGGC-TTG    TTTTTTTACTCCGTC 100 35
         fbp 4273342 .. 4273377 + -13.3  -3.23274   CGGAATAACGCATGA    AGCCGCCATTGGGCA ATAACA TGTCCGATGGCGGCG     TTGCCTTATCAGGCC  91 55
         ppa 4274099 .. 4274120 + -10.9  -5.11063   AAGCGTCAAGATAAA           GGCTCTCAT AGTA ATGAGGGCC            TTTTTATTGGCTAAT 100 55
NFH28_RS21025 NONE
NFH28_RS21030 4276875 .. 4276892 + -12.7  -3.14878   GAATGTAAAAAACAA             CGCCACC CGAG GGTGGCG              TGTTCAGTTCAGGGC  86 53
        msrA 4283698 .. 4283719 +  -5.1  -4.41895   CTAGCCCTGAACTTA           TCGGCTC ACTGCTAC GAGCCGG            TTTTCATTAAACGTT  68 115
NFH28_RS21055 4285158 .. 4285178 + -16.9  -6.31682   TGCCAGAAACATCAA            CGGCTCCTG ATT CAGGAGCCG            TTTTTTTTTACTTTT 100 49
NFH28_RS21065 4286473 .. 4286490 +  -5.5  -3.53012   AAGCTGCGCCTGGCC             TTCCGCC ACAA GGCAGAA              TTTCAGCGAGGAACC  55 189
NFH28_RS21075 4289264 .. 4289317 + -19.3  -2.79831   AACGTGTGTCCCGTA TGGC-GCT-GCG-TTTATTCGGCCTG ACTGG CAGGCCGAATAAAGCGCTAGCCGCCA TCTGATAAACGTTCC 100 39
NFH28_RS21100 4292365 .. 4292384 +  -7.8  -2.98493   CGGAAAAAGCGACCG            TCGTTCCG GTCA CGGAACGC             TAATTTCATACTCGC  62 3
        ytfE 4293651 .. 4293674 +  -4.6  -4.07568   TTTCGCCGGTACCGC          GCGTTTCGATA GCT TAGCG-AACGC          TTTTGGCGCCACGCC  62 524
NFH28_RS21120 4296485 .. 4296506 + -10.2  -3.61398   TACCCTATTCGTTCA           GGTGAAGC ATTACC GCTTCACC            TTATTCACCCACCAA  78 66
        yjfY 4299790 .. 4299807 + -12.7  -5.00616   AGCCATAGTTGATTT             GCCCCCT GAGC AGGGGGC              TTTTTTCGCGGAAAG 100 62
        ulaG 4305726 .. 4305743 + -12.7  -5.22943   TGTGAGTCGATATCA             TGCCGGG ATTA CCCGGCA              TTTTTTCCATTTACT 100 36
        ulaR 4306691 .. 4306708 +  -3.3  -3.64703   TCGCCGCGGCGAGTG             CCTGCTG GAGC CGGAAGG              TTTCGATAGCAGGCA  51 141
        bsmA 4307843 .. 4307855 +  -2.7    -3.192   TCAATAACAGTAGAT                TGATT TTT AGTCA                GTTTTACATTGCTTT  45 34
        yjfN 4308561 .. 4308584 +  -3.1  -4.36914   CGCAAAAGCTTCACT          CAATACGTC ATAGAC GCCGTGTTG           TTTTGTCAGCACCCG  62 346
        queG 4332768 .. 4332782 +  -8.6  -3.76413   TGCGATTGGTGGTCT               GTGCTT AAC AAGCAC               TTTCAAATTTTGGAG  75 502
NFH28_RS21345 4334134 .. 4334168 + -11.5  -3.04144   CAGTGTGGGGAGAGC    TGCCGGAT-GAGACGC TCTG GCGTTGCCATCCGGCA     TGTTACGCCTCACAG  79 43
        rsgA NONE
         asd NONE
        mscM 4340267 .. 4340280 +  -3.7  -3.86015   GCGGGTAAAACCAGC               CGCCC GGCG GGGAG                TTTGTAAACGCAATG  55 5
        frdA NONE
        frdB NONE
        frdC NONE
        frdD 4347052 .. 4347080 + -11.8  -5.83211   TCTAAGTTGCCACGA        CGCCCTCTTATC TACCC GATAAGAGGGCA        TTTTTTCTTTTCCTG 100 36
NFH28_RS21405 4347680 .. 4347702 +  -3.4  -3.14931   GGTAAAACAATCAGG           TTCGTAGC AATATCA GCGACGAA           TTAATGCGCACTGAG  46 19
NFH28_RS21415 4349303 .. 4349324 + -10.1  -4.59773   GCGCGAAAAATAGGA           TGGCGCAGC ATAC GCTGCACCA            TTTTTCCCGATAACG  91 464
        epmB 4351131 .. 4351149 +  -4.4  -2.76291   ATAAAGTCCGTTTTA             GGACTCGC TTA GCGTGTAC             TGCATTTTCGAATTA  47 177
NFH28_RS21440 4352597 .. 4352620 + -13.8  -4.00066   TGACTAAAAGAAAAA          CCCCCGGTCA TTTC TGCCCGGGGG           TTTCTCAATTCTGGG 100 504
        yjeH 4356589 .. 4356614 +  -2.5   -5.4833   ACTCTTAATCATTTC         T-GCCGCCGG GCTCTCA CCGGCCGCCA         TTTTTTGTTGCATCA  85 351
        aspA 4358598 .. 4358618 + -15.5   -5.4505   GGGTAGTACCAAAGA            GGCACGTCA CGA TGACGTGCC            TTTTTTCTTACAAGA 100 48
        dcuA 4360002 .. 4360024 + -14.8  -3.30635   TGTAAGTGTTTCACC           CGCGGGGCGT ATC ACGCCCCGCA           TTCTCCCGCCCTTTG 100 36
        cutA NONE
NFH28_RS21485 NONE
NFH28_RS21490 NONE
NFH28_RS21495 4363084 .. 4363106 + -13.5  -4.42386   TTGTCCCTCAAGTAA           GGGAACCTG CCCTA CAGGTTCCC           TTTTCTCGATCACCG 100 168
NFH28_RS21550 NONE
NFH28_RS21555 4376007 .. 4376027 + -13.9  -3.58305   TACCTGGACTGATAA            CGGGACCGC GAC GCGGCCCCG            TTTGCCGAATTAATT 100 29
        silR NONE
        silS NONE
        silE 4388791 .. 4388806 + -11.8  -5.38047   TGTTGTGACTTTTTT              GCCCCC ATCC GGGGGC               TTTTTTATCTGACTC 100 101
NFH28_RS21610 4389294 .. 4389309 +  -6.1   -5.9218   GTTAAATAATTAAAA              CCCGA TTTACT TCGGG               TTTTTTTATTGTGTA 100 106
NFH28_RS21640 4395217 .. 4395239 +  -5.6  -4.65916   CCACATTCGATATGC           TCTCCCTT TCAGGCT GAGGGAGA           TTTTCTTGCAGTCAC  74 400
NFH28_RS21665 4399557 .. 4399579 +   -12  -3.44255   AACGATAACAACTAA           CAGCGCTGCT CAT ACCAGCGCTG           TGTTTCAGTAGTTAT  88 26
NFH28_RS21695 4406123 .. 4406156 +  -9.5  -3.22102   GTCACCACAGACATC     CCGGGTTCACCCTGC GGTG GCAGGGTGAAAACAG      TGTTATCCGGGCTGT  68 384
NFH28_RS21750 4415201 .. 4415246 + -10.5   -3.1247   TTTTCCCACCACCTT CGTTTACCTCAGTGTAAAGCC AAAT GACTAAACACTGAGGTAAACA TTCCATGTCAAAAAT  73 51
NFH28_RS21755 4415594 .. 4415608 +  -4.2  -2.60075   AACCACGCTGCTGCT               GCATTC CAC GTATGC               CTTAATTCCAGAGGA  44 6
        arsA 4417396 .. 4417411 + -10.4  -3.72576   TGGCAAGCTAATAGA              TGGGGC TACG GCCCCA               TTTACTGCAGCCAAA  80 30
NFH28_RS21765 4418064 .. 4418079 + -11.8  -4.50993   TTGAGGCAGGAATAA              GGGGGC GTCT GCCCCC               TTTATGTTTATTTCA 100 37
NFH28_RS21940 4445095 .. 4445116 +  -9.5  -5.42259   AAGGCTCTTAAAGAA           CAGACTTGT TAGC GCAAGTCTG            TTTTTTTGCGCCTGA 100 409
NFH28_RS21950 4446741 .. 4446755 +  -3.5  -4.06055   GCGTAGGGGCGGCCG               GGCGT GGAGA ATGCC               TTTGGTTTCCCCGAT  57 93
NFH28_RS21965 4448441 .. 4448466 +  -2.7  -4.54727   AGCTATATATTAGTT         TTCTTTTGAAA TATT TTTCAGAATAA          TTTTGATTTACACGC  63 226
NFH28_RS21970 NONE
        rtsB 4449645 .. 4449656 +    -3  -3.21225   TGAATGAGTTTTACA                TATC AGTC GATA                 TTACGTAATTTTTCC  45 6
NFH28_RS21980 NONE
NFH28_RS21985 4450230 .. 4450240 +    -4  -2.83022   CCTGCTGAAAAAACA                 GAAT AAT ATTC                 ATTGTCTGTTAATTA  45 76
NFH28_RS21995 4453390 .. 4453403 +  -2.4  -3.04263   TACAGGCCAATAGCA               TCAG GCCAAA CTGA                TCTTCCGGCTCGCGT  42 333
NFH28_RS22020 NONE
        dcuR 4460529 .. 4460543 + -11.4  -4.98531   TATTTTCTATTATTA               CAGCGC TCT GCGCTG               TTTTTAATTTCAAAA 100 181
NFH28_RS22030 4460996 .. 4461016 +  -5.4  -3.80841   GTTAATCGTCGCCAC            TGGCGCAT TGAAT ATTCGCCA            TTTCCTGATGCTCAT  61 65
        dcuB 4462447 .. 4462463 +  -9.3  -3.28712   GGATTCCTGTAATGG              CCGCGCG CGC CGCCCGG              TTATGCGCGGCGCGC  71 29
        fumA 4464230 .. 4464255 + -11.9  -3.30124   CGTTATCGGTTAATT         GCCGGATG-GCG CTA CGCTTATCCGGC         TTATCCGGCCTGCAC  85 70
        melR 4468497 .. 4468526 +  -6.5  -3.14344   ACTTTACACCCCCTA       TTTGACG-GGGTAA TAC TTGCCCACGTCACA       TTCATACGGCGGGTC  57 169
        adiA 4470933 .. 4470952 + -12.1  -5.60993   CTGTCATACCTTTTT            GCGCGGG CCCCAT CCCGCGC             TTTTTTTATACAAAA 100 105
NFH28_RS22065 NONE
        adiC 4473461 .. 4473475 +  -2.9  -4.61873   ACCAACATTAAGTTC               TTAAG GTTCA CTTAA               TTTTACTTTGTCACG  65 97
        eptA NONE
        pmrA NONE
        pmrB 4477229 .. 4477239 +  -8.2  -4.08064   ATGTCCGACGCCGCT                 GGCG TTG CGCC                 TTTTAACGGACGATT  77 343
NFH28_RS22100 NONE
        yjdN 4480083 .. 4480095 +  -4.8  -3.32819   TTGATCCTGATGAGG                CGTC GGGAG GACG                TTATGCCAGTCTGTG  54 162
        phnO 4480640 .. 4480651 +  -3.6  -2.94232   TGGATAAAGGTTAAA                CGGG CTGA CTCG                 CTTCTTTAGCAAAAA  44 133
        lpxO 4481702 .. 4481735 + -14.6  -3.55219   AGCCTCCTCTGAAGC     CGGGCCGCGGTATGG AACTG CC-TGCCGCGGCCTG     TTCTATCCTGGCGTT 100 29
        fdhF 4484298 .. 4484317 + -13.6  -5.64274   GCATTTTCCCTATAA            CAGCCTCC GCCC GGAGGCTG             TTTTTTTATCCATAC 100 123
NFH28_RS22125 4485260 .. 4485277 +  -6.9   -5.0538   TTTGCCCAGCACGTC             GCGCTCG TAGG CCAGCGC              TTTTTTGCGGTCAAA  86 219
         acs 4496062 .. 4496077 +  -3.2  -2.80816   CGAAAGACGCAGGGG              GACCTC TGGA GAGCTC               TGTGATGAATGACCA  43 251
NFH28_RS22170 NONE
        actP NONE
NFH28_RS22190 4500315 .. 4500329 +  -8.6  -3.01918   CGTGCAGCAGCTTTT               GCAATG TTT CATTGC               TGATTTCTCGCGTGG  60 176
        soxS 4505587 .. 4505614 + -11.2  -4.30719   CGCCTGTAGGGCGTC        TGCCCGCGTATC GTCA GAGGCGCGGGCG         TTTGTTGTAGCCAGG  93 32
NFH28_RS22225 4508221 .. 4508241 + -11.2   -5.4505   TTAAATGACAAAAAA            GACCCGTT TGTGC AACGGGTC            TTTTTTATTAAGCAG 100 233
        uvrA 4536341 .. 4536376 +  -9.7  -4.77036   ATGCTCAAATAACCT    TCACGCCGCTTTCCG ATTCGC CGGGAAGCGGCATCA     TTTTTCCTCATCCCA  91 29
NFH28_RS22270 NONE
NFH28_RS22275 4537438 .. 4537452 +  -4.2  -4.07885   GACGTAACAACTCTG               CCAGTT CCG GGCTGG               TTTTGAGAGAGGCTG  62 214
NFH28_RS22310 4544020 .. 4544050 +  -5.6  -5.80364   TAATAGCTCTGCAAA      GAAATTGGGCTTCC ACCCG GGAAGCCC--TTTC      TTTTTTTGTTCGGCT 100 38
         zur 4547861 .. 4547887 +  -5.3  -2.94422   ATATTACCAGCGATA        GTTGTT-AC-GGG TTT CCCAGTCAACAAC        CTCTTTTTCCGCCTG  50 136
        plsB 4553778 .. 4553788 +  -6.8  -2.78596   ATCTCTGTCGACCAT                 CGCA TAT TGCG                 TATCGTAAGCCACTG  52 433
        malE 4560247 .. 4560258 +  -5.8  -3.30124   CCTGTGCCGGATGGC                GGCA TAAA TGCC                 TTATCCGGCCTACAA  56 50
        malF NONE
        malG 4562884 .. 4562899 + -10.4  -5.66684   TATGGTCGTATTTTG              GCGCTC TTCG GAGCGC               TTTTTTTATGCGTTA 100 106
        lysC 4571435 .. 4571447 +  -4.8  -4.13767   CATTCTGTCAGCAAT                TGCC TGACC GGCA                TTTTCGGCTGACGCG  62 377
NFH28_RS22445 NONE
NFH28_RS22450 4573013 .. 4573025 +  -4.8  -2.63723   TTATTTGCAATGGGG                GCAG GCTAG CTGC                ATTCATTAATCAGAG  48 4
NFH28_RS22455 4573359 .. 4573397 + -12.7  -4.75954   CAACGAGGTAACCAT  TAAACAAATCCCCGTCGT TTAT ACGCCGGGGATTT-TTTA   TTTGTTTTAACTTTT 100 23
NFH28_RS22460 NONE
NFH28_RS22465 NONE
NFH28_RS22470 NONE
NFH28_RS22475 4576116 .. 4576135 + -13.6  -3.53091   TTGGCGGTTAATTAC            TTCGGGGC TACG GCCCCGAA             TTTAACACGACGAAT 100 30
NFH28_RS22480 NONE
NFH28_RS22485 4576556 .. 4576578 + -12.7  -3.72576   TAAACACGAATACGA           CTCGCAGGC TTAAT GCCTGCGGG           TTTCCTGACCCAAGC 100 13
NFH28_RS22490 4579013 .. 4579028 +  -2.6  -3.02144   ACGGCGCCGGGAGTA              C-GCATA ATG TATGCCG              TATTAGGCGAAATAG  43 19
NFH28_RS22495 NONE
NFH28_RS22500 NONE
NFH28_RS22505 NONE
NFH28_RS22510 4582118 .. 4582130 +  -6.3  -3.14839   TGAAAATGTAATCAC                TTTGC GCT GCAAA                TATTGCATATATGTA  57 199
NFH28_RS22515 4582628 .. 4582641 +  -3.9  -2.56343   TGTTTTCAGGAATGA               GAAAT GAAA ATTTC                ATTAGTGGTTCCCGT  44 19
NFH28_RS22520 NONE
NFH28_RS22525 4585083 .. 4585101 +  -4.7  -4.36595   TTCTGTAGACAAAGG             TGAAATT ACAGC AATTTCA             TTTTAACTTTACGTA  66 1
NFH28_RS22530 NONE
NFH28_RS22535 NONE
NFH28_RS22540 NONE
NFH28_RS22545 4589088 .. 4589098 +  -2.6  -2.83343   ACGCGGTTCTAGCGG                 TTTT GTA AAAA                 TCTCATGGTGAATAT  41 4
NFH28_RS22550 NONE
NFH28_RS22555 4590177 .. 4590199 + -10.5  -3.15354   CGATTGTTGAATCTC           TCGCCGGGT ATAAA GCCCGGCGG           TGTTGAATTAAAATA  74 31
NFH28_RS22560 4590786 .. 4590798 +    -2  -2.79831   AACAAATAAATTACA                TTCA CATCT TGAA                TGTAATAAAACTTCG  40 101
NFH28_RS22565 4591712 .. 4591725 +  -3.7  -2.52896   AATACGGTAGCGTAA               GCGCC ATCG GGCGA                TACGTTGCCGGATGG  44 102
        panS NONE
NFH28_RS22575 4593200 .. 4593213 +  -2.3  -4.60258   ACGCCGACGCGCGGC               AGACG TTAA CGTCC                TTTCTTCTTTCGTCC  64 17
        pepE 4595575 .. 4595626 +   -13  -3.79043   CCAGGCCATATTGAA TGCCGAATGAC-GGGCCTACGCGCA TGT TCTCCGTAGGCCCCGCCATCCGGCA TTTCACTTAATACTC 100 43
        iclR NONE
NFH28_RS22615 4603013 .. 4603028 +  -4.7  -2.63112   GCTGGCGGAATATCG              CGGAA ATTCAC TTCCG               TCATGTAGCAAATTT  44 278
NFH28_RS22640 4609434 .. 4609453 +   -15   -3.7956   CGCACACGCAAAAAA            GCCCGTCC TGAC GGACGGGC             TTCTTCACTTGTTTG 100 153
        purH NONE
        purD 4618435 .. 4618462 +  -9.7   -5.0538   GTAATGCCCAATTGA        CGGGCGGCTTC CGTTTT GTTGCCGCCCG         TTTTTTCCAGTGCCG 100 71
        zraP 4621834 .. 4621857 + -12.4  -3.08679   GGTAAAGCATGTTTG          CCGAATGGCG GCTT CGCCATCCGG           TATTCCATCAAAAGC  83 36
         rsd 4626830 .. 4626852 +  -6.8  -3.75378   ACGGGTAGTTTACTT           CAGCCCCCTC TTC GGAGGGGCGG           TTATCTTGTCGGAGT  66 55
        thiC 4629054 .. 4629069 +  -3.2  -2.90615   CTCAAGCGGGAGGAA              GCCTGA TGTA TCAGCC               TGATTTCCCCACCGT  44 20
        thiE NONE
NFH28_RS22735 NONE
        thiS NONE
        thiG NONE
        thiH 4632581 .. 4632604 +  -8.8  -6.14618   ACGTAATGCGAAAAA          CGGGAGATTG TTAT CGACCTCCCG           TTTTTTTATTTTGTC 100 78
NFH28_RS22765 4635278 .. 4635305 + -14.2  -3.61764   TATCCAGCATGAAGC        TGGTGGAGGGAT AAAT ACCCCTCCACCA         TTTAACGATTACTCG 100 360
NFH28_RS22840 4649861 .. 4649874 +  -5.3  -2.62983   TCAGGGATGGCCCTC               GTTCA TCGC TGAAC                TGATGTAGCAATAGC  48 189
        coaA 4650865 .. 4650884 +  -7.8  -4.87626   GAAATAACAGAAAAA            AGGGGAGT ACCG ACTCCCCC             TTTTTACTATTCGGC  86 34
        trmA 4662963 .. 4662976 +  -4.5  -3.53811   TCCGCGGTGTCCTGC               TTGCG GTTA CGCAG                TTTAAAGCCAATCCA  54 91
        sthA 4665589 .. 4665600 +  -5.8  -2.52516   CCATTGCGCCACGGA                TGGC CTCT GCCA                 GTTGCTCATAACGGC  48 61
        argE 4671446 .. 4671464 +  -7.4  -3.85698   TTCGCAGTAATTGAC             GCCACG GGTTTTA CGTGGC             TTTATAAAAGACGGC  68 211
         ppc 4674370 .. 4674382 +  -6.3   -4.0056   CAATATATTTCTGTC                TGCAT TTT ATGCA                TTTGTAAATCTTTCT  66 115
NFH28_RS22945 4676355 .. 4676379 +  -2.1  -3.49777   TTCGACGTTACTGTT          TCCTCTGTT TGCGATC GGCAGGGGA          TTATCATGTATCACG  47 156
NFH28_RS22950 4677727 .. 4677740 +  -8.1  -4.27441   ACTGATGAAACGGTA               GCAGG TGAA CCTGC                TTTATTCCTAATGAT  81 516
        ptsP NONE
         fsa NONE
NFH28_RS22990 4686842 .. 4686865 +   -14  -3.67976   ATAAGGTCTGAGCAA          TACTCCTGAC GATA GTCAGGAGTA           TTTCAGCTTGCTGAC 100 37
NFH28_RS22995 4687910 .. 4687924 +  -8.5  -3.42605   AACCAAACACCAGAT               CGGCG CGGGT CGCCG               TGTATTTTACCTCGC  64 223
NFH28_RS23015 NONE
NFH28_RS23020 NONE
        mscS 4696504 .. 4696516 +  -4.7  -4.08216   CACCATCTGTTCATT                CAGCG CGT CGCCG                TTTTCGAAAAAGTGA  62 420
        metJ 4700412 .. 4700438 +  -6.5    -5.055   TACTGATAGCAAAGC         ATGCGGTCAGA ACGCC TCTGGCCGCGC         TTTTTTAACGATTCC  83 35
NFH28_RS23045 4702669 .. 4702696 +  -9.8  -2.72227   AGATAGTAAAAGTAA        AACAGGCGGAAG CTAA CTTCCGCCTGAA         TGGTTAAAACGTATT  69 45
NFH28_RS23050 4703525 .. 4703538 +  -9.5  -5.93809   TAGAAAACAAAAAAA               GCGCC CTGC GGCGC                TTTTTTTTCTGGCGG 100 38
        priA 4706219 .. 4706229 +  -2.6    -3.494   AAGATCCATCACACT                 TTTT ATG AAAA                 TTCTGTAACCGCTTC  48 72
        cytR NONE
        ftsN 4708445 .. 4708489 +  -2.2  -3.14132   AATCTCCCCCATCTA TACTTGCATTATG-CCCCGTAC GCC GTACGGGGCCGCAATTC-AGCA TTAGTAACCAAGGGG  44 50
        hslV NONE
        hslU 4710414 .. 4710431 + -11.3  -5.07486   TTTCATCACTGTTGA             TGGGGCT GAAA AGCCCCA              TTTTTATTGGCGCTA 100 56
        menA 4711390 .. 4711404 +  -5.8  -3.08032   TTTAACTGACAAATA               TCAATT AAC AATTGA               TGATTTTGCCAACAG  52 36
        rraA 4711966 .. 4711981 + -11.8   -5.3236   CGAGTGATCAAAAAA              GGCGCC GTAA GGCGCC               TTTTTTATGCGTTGT 100 34
NFH28_RS23100 NONE
        glpK 4715210 .. 4715239 +  -9.3  -2.66602   CGCCATCCGGCAAAA       TCTTTGTGCGGAG GCAA CTCCGCACACACA        TCAATTATTCCCTCC  66 44
        glpX 4716334 .. 4716355 + -10.9  -2.74122   TTGTTAGTTAGAGCC           TTCCAGCCT CGCG GGGCTGGAA            ATCTTTCTCCTGACG  74 46
         fpr 4717642 .. 4717658 +  -3.6  -3.65351   CAAATCCAGAAATCA              CGGCGT CCGAT ACGCCC              TTTAAATGAGAATAA  53 511
NFH28_RS23125 4718443 .. 4718462 +  -5.6  -2.57354   CTGTTTCACAGACCA            TGCTGCTC TGAC GAGCGGCC             ATCTTCCTTAATTCG  50 80
        tpiA 4719344 .. 4719358 +  -2.7   -4.0162   GGCCTGATAAGGTAA               AGCCG CCATC CGGCA               TTTATGCTGTGGAGG  56 101
        lsrR NONE
        lsrK NONE
NFH28_RS23180 4729380 .. 4729392 +  -6.3  -2.54276   ATGCAATATCAAGCT                GTCAT TTG ATGAC                CTGTTGGTTCAAGAT  53 114
        cpxR 4739780 .. 4739794 +  -2.8  -3.53091   ATCTGATGGTTTCCG               CTTCAT GAT AGGAAG               TTTAACCGCGCGCAT  48 18
        cpxA 4741164 .. 4741185 + -15.9  -5.36441   CGAACCTAAAAACCA           TCGGCCTGC GAAT GCAGGCCGA            TTTTTTATCTCGCCG 100 32
NFH28_RS23265 NONE
NFH28_RS23270 NONE
NFH28_RS23275 4746175 .. 4746187 +  -2.6  -3.28712   ATCTCGTTGCCGGAT                GGCG ATTCG CGTC                TTATCCGGCCAACGC  46 59
        rhaT 4748648 .. 4748681 + -10.3  -3.55444   TAATCGCTTTGATTA     CTGAGATGACGCC ATTGGCTC GGCGTCATCCCGG      TTTCCCGCGTGAACA  77 38
        rhaB NONE
        rhaA 4753517 .. 4753568 + -13.8  -3.30243   GGCCGGATAAGACGC CCGCGTCGCCATCCGGCAAT AAATGAAACACG ATTGCCGGATGGCGCTGCGC TTATCCGGCCTACGT 100 60
        rhaD 4754469 .. 4754480 +  -7.2  -3.80625   ACCTCCCAACTCAAC                GCCG GATG CGGC                 TTTGCCTTATCCGGC  68 42
        fucO NONE
        rhaM 4756040 .. 4756076 +  -3.6  -5.49579   TCTATCTGCAGTAAG   TCGTGTGCCCGAT-GGC GCAA GCTTACCGGGCCTACGG    TTTTATTTTTTGTCG  86 27
NFH28_RS23330 NONE
NFH28_RS23335 4758028 .. 4758042 +  -8.5  -5.10208   ACATGAACGAAAAAA               GCGCC TGATC GGCGC               TTTTTATTGGCGTTA  91 295
NFH28_RS23345 4760500 .. 4760514 + -12.8  -5.26875   GCGACTGCCAAAAGA               GCGCCC CAG GGGCGC               TTTTTTCGTTCGAAG 100 99
        fdnG NONE
        fdxH NONE
        fdoI NONE
        fdhE 4767740 .. 4767755 +  -4.6  -4.82901   CGCTTTCCTTTGCCT              CGCGCT CCCC AGCGCA               TTTTTCTCAGGCCGC  74 517
NFH28_RS23385 4769056 .. 4769110 + -10.2  -3.96624   CTAAAATTCAATTTT GTTTTCAACTTGAAAACTGGATAACG TTG CGCTAAATTGTTTTCAGGTTGAAAAC TTTGTAATGGAACTA  82 37
NFH28_RS23390 NONE
NFH28_RS23395 4770080 .. 4770094 +  -2.8  -3.62275   AGCGACCCCAAATCA               GCCA CGGCGTT TGGC               TTTCCGCTAATGGGT  51 221
        yihU NONE
        yihT NONE
        yihS NONE
NFH28_RS23445 NONE
NFH28_RS23450 NONE
NFH28_RS23455 4782313 .. 4782326 +  -9.5  -4.08064   AACAATAAAATATAA               CGCCC TGCG GGGCG                TTTTGAGAGGCGATT  81 42
NFH28_RS23460 4783773 .. 4783802 +  -4.4  -3.21872   AATTAAACGACGCTT      GCCGCTTTATCCAT CCCG ATGGAT-G-GCGGC       TTCCCTATATTTGAA  50 35
        ompL 4784558 .. 4784578 + -10.4  -2.80195   CGAATCAGCATCACA            GCGGGTAG TTGTT CTGCCCGC            TCATTCATCCTGAAT  71 60
NFH28_RS23470 4785519 .. 4785572 +  -4.5  -3.22995   TATGAATGCGATGTA CACCGAGTGATTGAGTAGGGGAATG TGCA CATTCCCCTACTCAACGATAAAGGG ATTTATTGTGATTAC  50 16
NFH28_RS23475 NONE
NFH28_RS23480 NONE
NFH28_RS23485 NONE
NFH28_RS23490 NONE
NFH28_RS23495 4790277 .. 4790303 +  -8.6  -4.87665   ACGTGAATAAAAAAA         CCCCGCCGAGCT TTC ATTTCGGCAGGG         TTTTTATCCGTAAGA  89 31
        glnA 4794096 .. 4794113 + -11.3  -5.24129   CCGTGGAAACTTTCA             GCCCATC CCAG GATGGGC              TTTTTTCTCCACCAA 100 187
        glnL NONE
        glnG 4796710 .. 4796733 +  -6.8  -3.93038   AAGATTAATAATTGA          GCGCAAAA CGCTGCTA TTTTGCGC           TTTACTGTTCCGATG  68 59
NFH28_RS23520 NONE
        yihA 4800301 .. 4800312 +  -7.2   -2.5294   CCGCTATGCCGGATG                GCGC CGCT GCGC                 GTCTTATCCGGCCTA  57 45
NFH28_RS23550 4804683 .. 4804707 + -14.3   -5.8096   TAAAACATCTTATAA          AAACGCCGGTC AGT GACCGGCGTTC          TTTTTATTTTTTATC 100 10
        mobA NONE
        mobB 4807860 .. 4807904 + -13.6  -3.30124   TGTAGGCCGGATAAG GCGGAGCCGCCATCCGGCAGT GCCG GTTGCCTGATGGCG-CTGCGC TTATCAGGCCTACGG 100 36
        fadB NONE
        fadA 4821361 .. 4821379 + -13.1  -5.04385   TTAGTTGCCGTTTTT             CCCGCCC GTCAG GGGCGGG             TTTTTTCACCGTATG 100 181
        rfaH 4826545 .. 4826559 +  -4.2  -3.52204   GCAGATACGCGGGCT               CGTTGC GTC GTGACG               TTGGTTTCGGCGTAA  52 152
NFH28_RS23700 4835632 .. 4835646 +  -2.8  -5.72118   TCGCCACGTTAGCTA               TGCTTT ACC ACAGCA               TTTTTTATATTTTTT  89 108
        metR 4840876 .. 4840898 +  -4.1  -2.72344   TGATACCCAGCGTCC          CGGCGTCTAC CTGG GTAG-CGCCA           TAGTTCCACATAAAG  45 119
        rhtB 4844428 .. 4844445 +  -3.3  -3.28712   GCGAAAATACCCCAG             CG-CGCCG CAG CGCCGACG             TTATCGCCGACAAAA  45 240
NFH28_RS23755 NONE
        rarD 4849313 .. 4849342 +  -4.9  -3.44051   TATAATCTGAAAAAA       TATGCCTCCCCTT GTAA GGGGGGTAGCATA        TTGTCATGCTAACGA  56 59
NFH28_RS23765 NONE
NFH28_RS23770 4850172 .. 4850207 + -14.8  -2.62175   TGGAGCCTGTAACTT    TTCAGGGTGGTTCAGC CGCA GCTGAATCACCCTGGC     CTTAATGTCTTACAG  89 29
NFH28_RS23815 4857901 .. 4857911 +  -3.2  -2.71712   TAGTTTATACGTGGA                 TTGG CAG CCAG                 CTTTACCGAACAGCA  43 169
NFH28_RS23825 4858387 .. 4858405 +    -6  -3.29739   GCTGAGTTTTATCCT             TTACCGCT CAC AACGGTAA             TTCGTATCGGTTCCA  59 7
        cyaY 4859007 .. 4859021 +  -5.6  -4.95957   AAAAAGTTGACGTAA               CGCTGG TGA CCAACG               TTTTTCCTTGATTTC  80 237
        hemC NONE
        hemD NONE
        hemX 4866216 .. 4866244 +  -2.5  -4.36774   GCCGCGCCGCAAGGA        GAATAATGATGCT AAA AGTATTATTGCTC        TTTGTGTTGTTGCTT  60 20
        hemY 4867790 .. 4867806 +  -9.3  -4.16943   ACGCGATTGTCATCC              CCCCGCC GCT GGCGAGG              TTTTAGCGTGTCGCC  82 395
        rhlB NONE
        gppA 4887577 .. 4887587 +  -6.8  -3.66178   TTCGCTCGCTTTGCC                 GCCA TCA TGGC                 TTTCAGATTAGCCAG  64 87
        ppiC NONE
        ilvY 4893068 .. 4893090 +  -4.8  -3.83771   ATACGGCTAAGCATA           TTCACCAGAG CAT CAATGGTGAA           TTTGCTGCATTTCTT  58 77
NFH28_RS24055 4902485 .. 4902497 +  -6.2  -5.15167   GTTGGCGTAAAAAAA                GGGC ATTAC GCCC                TTTTTATTAATCATC  83 31
        hdfR 4903872 .. 4903891 + -10.8  -4.06419   TTAGGCAAAAAAAAA            TCCTTAGC AGAT GCTAAGGA             TTATTTCTGGCAGGG  86 100
NFH28_RS24100 NONE
        mdtD 4912204 .. 4912222 +  -6.7  -2.52946   CCGCCCGATACCCTT            CCAGC-CG TAAA CGCGCTGG             CGTTTTGTCCAGCGG  51 395
        ravA NONE
        viaA 4923156 .. 4923174 + -10.2  -2.71712   CGACTGCCCAATCCC             GCCGCCGA TGG TCTGCGGC             ATTTCGCCGCGCAGC  66 144
        asnC NONE
        mioC 4925457 .. 4925472 +  -6.8  -3.92373   ATCTTCTTTTTAATA              G-CCCGG ATC CCGGGGC              TTTCTCCATCGGCTA  68 306
        mnmG 4927496 .. 4927521 +  -8.9  -3.04089   CCTACAAATTTGTAG         GCCCGATAAGC GAAA GCGCATCGGGC          ATTTGATTATTAACA  68 77
        rsmG 4928229 .. 4928246 +  -3.4  -3.30038   AAAAATCGACAGGTA             TAACGC ATTTCA GCGTTG              TTACATTTAACTCTG  48 84
        atpI NONE
        atpB NONE
        atpE 4930270 .. 4930282 +  -3.3   -3.4052   CGTGATGTTCGCTGT                CGCGT AGT AAGCG                TTGCTTGAATTAAGA  48 19
        atpF NONE
        atpH NONE
        atpA NONE
        atpG 4933820 .. 4933830 +    -4  -3.73968   GGGGCCGCCGCGGTT                 TAAC CAG GTTA                 TTTCGTAGAGGATTT  55 23
        atpD NONE
NFH28_RS24220 4935693 .. 4935712 +   -10  -6.26417   CTTGAAAGCATAAAA            CCAGTCTG ATTG CGGACTGG             TTTTTTTTTATCCTC 100 47
NFH28_RS24225 4936624 .. 4936643 + -11.4   -5.1417   ACGCGCAACGGAAAA            CCAGCGGC CTCT GTCGCTGG             TTTTTGCTTTTCTGA 100 50
        glmU 4938355 .. 4938369 +  -5.6  -2.83271   GGATAAAATAATCCT               CCGCTC CAT GAGCAG               TACTTATAAAAATAA  50 91
        glmS 4940332 .. 4940349 + -12.7    -5.626   TAGTACCAGGCAGAA             GGCCGTC GACA GACGGCC              TTTTTTTGTGCGCTG 100 50
NFH28_RS24245 NONE
NFH28_RS24250 4944568 .. 4944594 + -12.2  -5.96894   CATCTCCCCCTGCAG         GCTGGTCTGGTG TCT CCCCGGGCCAGC         TTTTTTTATTTCCAT 100 43
        pstS 4945862 .. 4945872 +  -3.2  -3.72695   CGGCAGGGGCAACGT                 CGTA AAA TGCG                 TTTAATGGAAAGAGT  53 130
        pstC NONE
        pstA 4947754 .. 4947779 +  -8.3  -3.10175   TTAAAGACATTGTAG         GCCTGATAAGCG TAG CGCC-ATCAGGC         ATTATTTTACGGCGT  66 37
        pstB NONE
        phoU 4949333 .. 4949351 +  -3.1  -4.09685   GGCGGGGAAAGATCC             GAAAGAG TAAAT CTCATTC             TTTTGCCCGGTGGCG  57 16
        adeP 4951618 .. 4951640 + -14.8  -4.58283   CACTGATGAAATGAA           CCCTCGCCCC ATC GGGGGGAGGG           TTTTTAACGAACTTA 100 35
        rpmH 4963528 .. 4963541 -  -2.3  -3.58343   TTTATTACTTGGAAA               CGGTC AGAC GAGCG                CGGCCTTTAGCACGA  49 1
        rnpA NONE
        yidD NONE
        yidC 4961161 .. 4961178 - -12.7   -5.7946   GTTGCAATAAAAAAA             GGCGGTC ATAT GACCGCC              TTTTGATTGTAGGCC 100 118
        mnmE 4959703 .. 4959729 - -10.9  -5.00138   TATGGAAAGTAAAAA         CCCGCGTTAAC AGGCA GTTAATGCGGG         TTAGTGAACGTTCAC 100 61
NFH28_RS24315 NONE
NFH28_RS24310 4955744 .. 4955773 -  -8.5  -2.80195   ATTCAGCAGGAAGTA       CGGACGG-AAAGCC TTC GGCAATGCCGTCCG       ACTTATCTACAGCGT  64 319
NFH28_RS24305 NONE
        yidZ NONE
NFH28_RS24295 NONE
NFH28_RS24290 4951618 .. 4951640 - -14.8  -3.57418   CACTGATGAAATGAA           CCCTCGCCCC ATC GGGGGGAGGG           TTTTTAACGAACTTA 100 38
        yieH 4948965 .. 4948998 -  -3.8  -3.85817   ACCGCGCTGGAGAAA     TTCTC-CCAGCAGCA TCAGC CGCTGCTGGTGAGTC     TGGAGTCACTGGGCC  56 464
NFH28_RS24240 4940332 .. 4940349 - -12.7  -3.38272   TAGTACCAGGCAGAA             GGCCGTC GACA GACGGCC              TTTTTTTGTGCGCTG  90 134
        asnA 4922596 .. 4922617 -  -5.7  -2.76263   GGGAGGATTTAACGA           GCAGTGCGC AAAA GCGTTCTGC            CTGGCGTTGATGCGC  50 450
         kup 4917853 .. 4917863 -  -2.4  -3.17075   GGCCGGGTAAGCCAA                 CGCG GCC CCCG                 GCATGTTGATGGGAG  44 42
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB 4913753 .. 4913776 -  -9.5  -2.75844   GGTTCCACGTCAAAG          TGCGCCACC GGTTAG GGTGGCGCG           TGCCCTGCTTTTCTT  69 114
        rbsK NONE
        rbsR 4911567 .. 4911580 -  -4.5   -3.4252   TCTGACGGACGATAA               TGCCA GCAG CGGCA                ACAGCGTTCTGGCGG  51 245
NFH28_RS24095 4907635 .. 4907648 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGAACAGTTCTT  40 46
NFH28_RS24090 4907437 .. 4907472 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA     TTAAGGCAGGTGACT  79 61
NFH28_RS24085 4904235 .. 4904246 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 102
         rrf 4904080 .. 4904095 -  -3.3  -2.82742   ATTCTTTTACAACCA              CTGAT TTTTAC ATCAG               TTTACTGCTTAATTT  43 44
NFH28_RS24075 4903968 .. 4903987 -  -2.8  -2.79684   CTACCAATTGAACTA            CGCC-CC TAATTAG GGTGGCG            GAACGGACGGGACTC  41 21
NFH28_RS24070 4903872 .. 4903891 - -10.8  -6.11644   TTAGGCAAAAAAAAA            TCCTTAGC AGAT GCTAAGGA             TTATTTCTGGCAGGG 100 33
        maoP 4902485 .. 4902497 -  -6.9  -5.40072   GTTGGCGTAAAAAAA                GGGCA TTA CGCCC                TTTTTATTAATCATC  91 32
        ilvL 4900461 .. 4900484 - -13.8  -5.78622   TCAGGCCAAAAAAAA          CCCCCGGACC TTTC GGTGCGGGGG           TCTTAGTTCGTTAAG 100 50
        ilvX NONE
        ilvG NONE
        ilvM NONE
        ilvE 4897488 .. 4897502 -  -4.4  -2.78679   TCCTGTGACGCAAAT               TATTTT GGG AAAATA               TTAATTTTATTTATT  47 39
        ilvD 4895486 .. 4895510 -  -3.7  -2.91264   GGCGCGACTGACAGA         GGTTGA-GAT TCCGCC ATCATCAACC          TCCCAATTTCGATTT  46 20
        ilvA 4893917 .. 4893938 -  -8.7  -2.63479   AATATCTGGATATCA           GGCCCAC TTTACTTT GTGGGCC            CGAAAAACTAAACGC  63 45
NFH28_RS24015 NONE
NFH28_RS24010 4892965 .. 4892981 -  -9.4  -5.40072   CTGCGCGCAAAAAAA              GCGGCT GCATG AGCCGC              TAATTGATGCGTTCT 100 63
        ilvC 4890402 .. 4890429 -  -9.9  -5.28942   TATCGTAAATAAAAA       GCCGGGT--GGCG GCTA CGCCTTACCCGGC        CTACATCGTCTGCTT 100 86
         rep 4887281 .. 4887295 -  -2.7  -4.30576   GCTTCATCAGCAAAA               CGCGG TACCG CCCCG               TGTTGCGGAACAGCT  62 285
        trxA 4884117 .. 4884167 - -10.6  -2.74563   CTGATACCTTAATCA TTCGTCGAATGACAGACGC-CTG ACCATA CAGCGCCTTTGTCATTCGACGTA TAAAAGGTATTACGC  74 35
NFH28_RS23965 NONE
         rho 4882454 .. 4882485 - -14.6  -4.20696   GGATGAATCGCAAAA      CAAAAACGCCACGT AAAA ACGTGGCGTTTTCA       GGTAAAGACCAGGTT 100 39
        wecA NONE
        wzzE 4880073 .. 4880096 - -12.5  -3.06696   TTCTCTTCGAATAGA          CAGTAGGGG CCCAGC CCCCTACTG           CAGAGGTGTTGCTAA  83 37
        wecB NONE
        wecC NONE
        rffG 4876525 .. 4876535 -  -8.2  -3.07994   CGTAATGGGATGCAA                 CCGG GTA CCGG                 AACCTCCCGCCAGAA  62 86
        rffC NONE
        rffA NONE
        wzxE NONE
NFH28_RS23910 NONE
        wzyE NONE
        rffM 4870028 .. 4870042 -  -4.3   -2.6704   CAAATGGCAAATGGA               GCATT AAAAA AATGC               ACTTATTGTGTAAGA  46 112
NFH28_RS23895 NONE
NFH28_RS23890 NONE
NFH28_RS23885 NONE
NFH28_RS23880 NONE
NFH28_RS23875 4867978 .. 4867993 - -11.8   -5.8901   ACAGAAAACAAAAAA              CCCCGC CGAA GCGGGG               TTCAAAATTGGTCGG 100 34
        cyaA 4860439 .. 4860451 -  -2.7  -4.75372   AGCACTTACGAAAAA                TACTG CTG CAATA                GCGGCGCGTCATGAT  68 3
NFH28_RS23845 4859962 .. 4859975 -  -9.5  -3.30243   ATGTAGGCTGGATAA               GGCGC GTTA GCGCC                GCCATCCGGCACAGT  74 18
NFH28_RS23840 NONE
NFH28_RS23835 NONE
NFH28_RS23810 4857128 .. 4857138 -  -2.4  -2.56715   ATCCTCAGTAATTGA                 CCTG GGA CGGG                 CCATCTCCCGTTGCG  39 4
        dapF NONE
NFH28_RS23800 NONE
        xerC NONE
        yigB 4853836 .. 4853847 -  -7.2   -5.1166   CATGAAAACTAAAAA                CGCC CGGT GGCG                 CTTCGCTTACCGGGG  86 115
        uvrD 4851542 .. 4851553 -  -7.2  -2.50779   TTAACATCAATATAT                CGCC GGAT GGCG                 GCTTCGCCTTATCCG  57 111
        ysgD 4851280 .. 4851293 -  -4.5  -4.42765   CGGGAAAAAATGAAA               GGTCG CTGA CAACC                GCTAAGGCTATCAGC  66 37
        corA 4850145 .. 4850156 -  -4.4  -3.73294   GAAAAAGAGGTTAAA                GGTA TCAA TACC                 TGGAGCCTGTAACTT  58 86
        pldA 4846794 .. 4846815 - -12.3  -4.63479   CACCATAAATCAAAA           CAGGCGCTA TTTT CAGCGCCTG            CGAGAGAAACTGCAA 100 60
        recQ NONE
        rhtC 4843864 .. 4843874 -  -2.4  -2.50816   TGGGTATCCAGCAAT                 GGCG CGC CGCA                 GGCGCTATCGATCTG  38 404
        pldB 4842475 .. 4842485 -  -4.6  -3.91798   TAACCTCTAAGCAAA                 GCGA TTT CCGC                 TGGATAAATTAGGCT  59 6
        yigL 4841618 .. 4841634 -  -6.6  -3.12999   GTAGCGGAGAGTGAA              GTTGAC AACTG GTCAAC              TAACAAACAATCACA  58 41
NFH28_RS23720 4840358 .. 4840368 -  -3.2  -4.25104   CGCTGGCCAGCAAAA                 CGCA GAT TACG                 CCGGAAGATTTAGCC  62 327
        metE 4836974 .. 4836990 -  -9.4  -2.72471   GCGCCATGAGACAAT              GCGACG TTTAT CGTCGC              CAGGGAACATAACAG  69 351
NFH28_RS23705 4835545 .. 4835556 -  -2.2  -3.60316   ACGGTGGGAAAAAAG                GCTA ACCA CAGC                 GCATTACGATGTTTG  49 98
         udp 4833681 .. 4833697 -  -9.4   -5.2853   CACGCAAAAAGAAAA              GGCCGA ACGCG TCGGCC              TTTGCAAAAGAGAGG 100 45
        rmuC 4832097 .. 4832114 -  -2.6  -3.11727   AAGAAGTGTAACAGA             TTGGGC CAATTT GCCCTA              CTCTGCGCCAGGACT  43 58
        ubiE NONE
        ubiJ NONE
        ubiB 4828952 .. 4828962 -  -2.4   -2.8937   ACATACTTTTACATA                 CGAC CGG GACG                 ACATTGACTTGCGGC  41 107
        tatA NONE
        tatB NONE
        tatC 4827225 .. 4827246 - -15.9  -2.62184   CTTGCCCCCATATGA           CAACCGCCC TGGC GGGCGGTTG            TGTTTAGTCTTCAGT 100 29
        tatD 4826042 .. 4826062 -  -3.2  -5.02074   TCACCCTGGAAAAAA            TGGTACGC GGAAA ACGTACCT            CCGTCAGCGAACCGC  76 389
        ubiD 4824211 .. 4824252 -  -4.6  -3.01712   GGTGTCGGGTCAATA CCGACATTTTTCAAGCTGAG TCGC CGCAGCCTGAA-A-TGTCGA TGTCCGCTTTCAGTT  49 39
         fre 4823452 .. 4823469 - -12.7  -4.74504   AGGCTAACGTAAAAA             GGGACGC TACT GCGTCCC              ATAAAATAGTTAAAT 100 35
NFH28_RS23635 4821262 .. 4821295 - -21.1  -3.09933   CGGCAACTGAGCGAA     TCCCCGGGCACATAG ATAA CTATGTGCCCGGGGT      GAGCAAAGGCAGCCA 100 132
        pepQ NONE
NFH28_RS23615 NONE
        trkH NONE
        hemG 4813615 .. 4813633 -  -3.2  -2.52623   TTTGCCTGACAAGAG             GAAATTTA AAA TAATTTTC             TGAGTGCGCACTTTT  42 53
NFH28_RS23600 NONE
NFH28_RS23595 4811547 .. 4811560 -  -5.3  -2.71745   CGTGGAATAACGAAG               CATAC ATCA GTATG                TGAGTTATTTCACAA  49 61
NFH28_RS23590 4811350 .. 4811383 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTCGTAAAC  69 51
NFH28_RS23585 4808235 .. 4808246 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 102
         rrf 4808062 .. 4808111 - -22.5   -2.7035   CTCACCGACAGACCA CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTATTTG ATGCCTGGCAGTTCC 100 28
NFH28_RS23565 4806428 .. 4806438 -  -8.2  -3.62597   TTTACTCTTTAATAA                 CGCC GCG GGCG                 CGTAAAAGCGCCGTT  69 1
NFH28_RS23560 NONE
        dsbA 4804686 .. 4804704 -   -16  -4.87273   AACATCTTATAAAAA             CGCCGGTC AGT GACCGGCG             TTCTTTTTATTTTTT 100 32
        polA 4800365 .. 4800391 - -18.1  -5.55769   GCGCACAATAAAAAA         CGCCCCAGTCA TAAAC TGACTGGGGCG         GCTAAAATATTCAGC 100 250
NFH28_RS23535 4799126 .. 4799179 - -19.9  -3.99405   GGAATCTAGCAGAAA GCAAGCAAAGAAAAAAGGCGACAGA GTAA TCTGCCGCCTTTTTTCTTGACTCAC GACCCTTAACGGGTT 100 31
        yihI 4798500 .. 4798518 -  -6.1   -3.3636   CCACACCAGATAACA             TATAACC GGAAG GGTTATA             AGCAGGACGGGCAAG  59 58
        hemN 4796491 .. 4796519 -  -6.6   -3.3197   ACATTACTGGCACAA        TGGGCGGACCGC GCCTT GCGATCCGGTCA        TCAAAACCTGCTTTC  58 495
        typA 4790277 .. 4790303 -  -8.7  -5.80364   ACGTGAATAAAAAAA         CCCCGCCGA GCTTTCATT TCGGCAGGG         TTTTTATCCGTAAGA 100 48
NFH28_RS23425 NONE
NFH28_RS23420 4772885 .. 4772911 -    -8   -4.3821   AAAAGACAATAGAAA         CGCAGACGATGT TCA ATATCGCCTGCA         TCACAGCGCCGTTTT  79 89
        yihX NONE
NFH28_RS23410 NONE
         dtd NONE
        fabY 4769694 .. 4769705 -  -7.2  -4.39828   AACACCTGGAGAAAA                CGCC CCCT GGCG                 TTTCAGTATTGCGAA  79 219
NFH28_RS23380 NONE
NFH28_RS23375 4767003 .. 4767015 -  -3.3  -4.07568   GTCGTGCGCGTAAAA                TGCAG TAA CTGCG                AACAGAGCCGCGACT  58 305
        fdhD 4760500 .. 4760514 - -12.8  -3.65542   GCGACTGCCAAAAGA               GCGCCC CAG GGGCGC               TTTTTTCGTTCGAAG  95 205
NFH28_RS23340 4758028 .. 4758042 -  -8.5  -5.31059   ACATGAACGAAAAAA               GCGCC TGATC GGCGC               TTTTTATTGGCGTTA  95 96
NFH28_RS23325 4756101 .. 4756115 -  -8.5  -3.28712   TTGTCGGCCGGATAA               GGCGG TTACG CCGCC               ATCCGGCAATTTCAA  69 37
        rhaS 4749559 .. 4749570 -  -7.2  -3.06796   CCGTAGGCCAGGTAA                GGCG CAGC CGCC                 ATCCGGTATTAAAGG  60 88
        rhaR 4748201 .. 4748211 -  -2.4  -3.19656   AAACCGATGCATGAA                 GCTG CTG CCGC                 GCTTGGCGTTGACCC  43 446
NFH28_RS23280 4746244 .. 4746266 - -14.2  -5.82316   ACCAGGTAAAAAAAA           CCGGCTACCT ATA AAGTAGCCGG           AAAAGGGAATAAATA 100 58
        sodA 4742335 .. 4742352 - -11.3  -6.02914   CGGATACAAAAAAAA             GCGAGTC ATCA GACTCGC              TTCTACAGACGTGCA 100 48
        yiiM NONE
NFH28_RS23250 4741162 .. 4741187 - -13.3  -3.44381   AGCGAACCTAAAAAC         CATCGGCCTGC GAAT GCAGGCCGATT          TTTTATCTCGCCGTC 100 46
        cpxP 4738380 .. 4738398 - -14.6  -6.02914   TGGAGATAAAAAAAA             CCCCCACA TCA TGTGGGGG             AAGACAGGGATGGTG 100 65
        fieF 4737282 .. 4737296 -  -2.9  -3.39432   AAACGATCCAACGAA               TATAC AGATA GTATA               ACAATCCCTTCCTGC  46 117
        pfkA NONE
NFH28_RS23220 4735011 .. 4735035 - -15.1  -5.63517   GTGGCAAAGAAAAAA          CCCGGTAACAT AAT ACGTTACCGGG          TTTATAAACGGTTTA 100 38
NFH28_RS23215 4734128 .. 4734156 - -16.9  -2.72799   TTTTTATAGACACGA        TCTTACCCCGGTT TTA AACCGGGATAAGA        ATCAATAAGATAATG 100 61
NFH28_RS23210 NONE
NFH28_RS23205 NONE
NFH28_RS23200 NONE
NFH28_RS23195 4729490 .. 4729529 -  -2.7   -4.4891   GCCAGCAGGACAAAA  GAGCCATCGCTTTGGCG TATCAC CGCCAGCGCGATACATC   ACAGCATCCCCGCCC  63 286
        lsrA NONE
        lsrC NONE
        lsrD NONE
        lsrB NONE
        lsrF 4720459 .. 4720498 -  -2.8  -3.86571   CCAAATAAAATAACA  GTCATCCCCATCTCCTCGC ATC GGTAAAAGATGGGGAAG-C  GATCTCATTTAACTT  54 34
        lsrG NONE
NFH28_RS23135 4719242 .. 4719255 -  -8.1  -3.57144   GCGGTGATCGTGAAA               GCAGC AGAA GCTGC                TAAACAGGCTTAATT  69 130
NFH28_RS23120 4717109 .. 4717135 -  -6.5  -3.83409   CGACAGATGACTAAA         CATCTGCGCCG CCGAC CGGGGCATATG         ACGGCTGAACATTAC  64 153
        zapB 4711966 .. 4711981 - -11.8   -5.1675   CGAGTGATCAAAAAA              GGCGCC GTAA GGCGCC               TTTTTTATGCGTTGT 100 223
        rpmE 4703517 .. 4703546 - -12.3  -4.38712   GTTATCCCTAGAAAA       CAAAAAAAGCGCC CTGC GGCGCTTTTTTTT        CTGGCGGTAACTTAT 100 37
        metB NONE
        metL 4696189 .. 4696202 -  -5.2  -3.08464   TGATGAGGGAGCGAA               GCGC AACCCG GCGC                TTCGCTCACGAACTT  51 48
NFH28_RS23010 4691128 .. 4691160 -  -4.9  -3.95036   AATCACGCCAAAGAA      TGAGGAATATTCAGC AAA GTTGAATTTTCTTCA      TGTCACGCCGCGACA  61 65
        metF 4690093 .. 4690108 - -10.4   -4.1711   ATGAGTTGTAATAAA              GCTCCC GGCA GGGAGC               TGGAGGTTATAAACC  85 32
        katG 4687723 .. 4687754 - -15.2  -4.39989   ATTAAACGAGGAAAA      CGTCAGCGACTACC GAAT AGCAGCCGCTGACG       AATTAACCTGTCAGA 100 41
NFH28_RS22975 NONE
NFH28_RS22970 4680762 .. 4680795 - -10.3  -2.91593   GATGGCGGCATAAAT     CTCTTATCGGGCCTG TGAG CAGGCCCGATAAACT      TGCGCCATCGGGCAT  72 48
NFH28_RS22965 NONE
NFH28_RS22960 4677583 .. 4677593 -  -2.4  -2.55668   TACTGCCATATTAAC                 CTCC TGT GGTG                 ACCTGAAATCCTGCT  39 10
NFH28_RS22955 4676718 .. 4676734 -  -7.9  -3.79021   CAAAACCTCACGAAA              CAGCACG TTG CGCGCCG              CGGCCCGCGTATCGG  68 514
        argC NONE
        argB 4668203 .. 4668214 -  -3.6   -3.3095   ACATAGGCCCGATAA                GACG CAGC CGCC                 ATCGGGCGAACAAAT  48 43
        argH 4666679 .. 4666704 -  -5.9  -5.40072   TTTTGCGTAAAAAAA         CCCGGCGTCGC TGAT GCTCGGCCGGG          CAGTATTGCCTGATG  87 59
        oxyR 4665219 .. 4665240 -  -5.9   -3.5627   ATACCATTCCGGAAA           TCAGTTCTG TCGG CAAAACCGA            GCAGCAGTTAACGGC  57 321
        fabR NONE
NFH28_RS22900 4662901 .. 4662938 - -11.3  -3.16336   ACCGCAAGGTAAAAT   GTACGTCGGATGGCCGGT TAT ACCG-CCATCCGGCATTC   GCACACTATTCCGCG  81 31
        btuB NONE
        murI 4658409 .. 4658421 -  -4.9  -3.16068   TCTTCAATTTAAAAG                TTTGA TGC TCAAA                GAATTAAACTTCGTA  52 387
NFH28_RS22880 NONE
NFH28_RS22875 4656672 .. 4656685 -  -5.3  -2.71745   CGTGGAATAACGAAG               CATAC ATCA GTATG                TGAGTTATTTCACAA  49 60
NFH28_RS22870 4656475 .. 4656508 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTCGTAAAC  69 51
NFH28_RS22865 4653180 .. 4653193 -  -5.3  -3.64703   CGGCCGCCAGGCAAA               TTCTG TTGC CAGAA                ACGAATCTTTTACAC  57 204
         rrf 4653017 .. 4653048 - -19.6   -5.1634   AGAAACAGACAAAAA      CAAAAGGCCCTGTC TTCC GACAGGGCCTTTCG       TTTTATTTGATGCCT 100 37
        murB NONE
        birA 4650866 .. 4650883 - -11.3  -5.57729   AAATAACAGAAAAAA             GGGGAGT ACCG ACTCCCC              CTTTTTACTATTCGG 100 33
NFH28_RS22835 NONE
NFH28_RS22830 4649260 .. 4649280 -  -2.5  -3.05816   TCATTCTGCACTGAA            TATCGAGAG AAA CTCTCTTTA            TTCGAGCCGGTAAGC  43 81
NFH28_RS22825 NONE
NFH28_RS22820 4648996 .. 4649012 -  -4.3   -3.3071   ATATCACCACATCAA              CCAGGCA ACA CGCCCGA              CTTGTTGAATGCTAA  52 76
         tuf 4647711 .. 4647728 - -11.3  -4.60924   GAAAGCGTGCAAAAA             GGGCATC AAAT GATGCCC              TTTTATTGCGCATTG 100 60
        secE NONE
        nusG 4646535 .. 4646563 - -17.6  -5.35224   CCCATAAAAACAAAA        GGCGCGAAATTG TATGT CAATTTCGCGCC        CTATGCAACGATTAG 100 65
        rplK NONE
        rplA 4645260 .. 4645296 -  -6.6  -2.80513   ATATTTCAACAGAAT   CGTGGG-GGTAAGATTG TAGA CAAAATCACCGCCCACG    TAAAGACTAATCTTA  55 38
        rplJ 4644386 .. 4644399 -  -8.1  -3.89695   GCTTGATAAAGACAA               CTGCG ATTA CGCAG                CTTCTTTTGCATCGC  72 18
        rplL 4643895 .. 4643920 - -17.7  -4.64766   CTTACAGCGCAAAAA         GGCTGGTGACT AAAA AGTCACCAGCC          ATCAGCCTGATTTCT 100 65
        rpoB 4639566 .. 4639595 - -13.6   -3.4252   TCGGAGTTAGCACAA       TCTGGTGTCGGG TTTTAC CCCGACACCAGT        GACCTGTTTGAGCGA 100 44
        rpoC 4635277 .. 4635306 - -12.9  -2.53164   GTATCCAGCATGAAG       CTGGTGGAGGGAT AAAT ACCCCTCCACCAT        TTAACGATTACTCGT  84 33
NFH28_RS22770 4634558 .. 4634582 -  -2.3   -3.6796   AATAGACTTTAATAA          CTTAGATTTAT GGG ATAAATTTAAA          GTCACATTTGGAATC  49 392
NFH28_RS22760 4632984 .. 4633000 -  -2.3  -4.99043   TCTGTATAAATAAAA              TTGTTAT TTA ATAACCA              ATTAAATTATTTAAG  69 215
NFH28_RS22755 4632581 .. 4632604 -  -8.8  -4.67234   ACGTAATGCGAAAAA          CGGGAGATTG TTAT CGACCTCCCG           TTTTTTTATTTTGTC  89 100
        nudC NONE
        hemE NONE
         nfi NONE
NFH28_RS22700 NONE
        hupA NONE
NFH28_RS22690 4621558 .. 4621568 -  -8.2  -2.65993   ACTATACGCAGACCA                 GCGC GCT GCGC                 CAGCAACTGATATCC  56 322
        zraS NONE
        zraR 4618067 .. 4618077 -  -2.4   -4.4648   AGCTGGATGAGAAAA                 CCTC CGA GTGG                 GACGAACGCGCTTCA  62 334
NFH28_RS22660 NONE
NFH28_RS22655 4613063 .. 4613098 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA     TTAAGGCAGGTGACT  79 100
NFH28_RS22650 4609759 .. 4609772 -  -5.3  -3.64703   CGGCCGCCAGGCAAA               TTCTG TTGC CAGAA                ACGAATCTTTTACAC  57 204
         rrf 4609596 .. 4609627 - -18.2  -4.63586   AGACCACAGATAAAA      CAAAAGGCCCAGTC TTTC GACTGAGCCTTTTG       CTTAATTTGATGCCT 100 37
        metA 4607722 .. 4607737 - -10.4  -5.63517   TTCGGAAATAAAAAA              GGCACC CGAA GGTGCC               TGATTCAACATGCTG 100 71
        aceB NONE
        aceA NONE
        aceK 4602210 .. 4602226 -  -6.5  -3.17527   TATTTATGACGAACA              CCGCGAA CCG TTTGCGG              CCCTCTCTATTTCCG  56 523
        metH 4597476 .. 4597498 - -14.2   -3.4214   ATTGTAAGAAAGAGA           CAAGGCACCC AAT GAGTGCCTTG           TATGTTGTAAGGAAA 100 58
NFH28_RS22600 4595575 .. 4595626 - -16.8  -3.12999   CCAGGCCATATTGAA TGCCGAATGACG-GGCCTACG CGCATGTTCTC CGTAGGCCCCGCCATCCGGCA TTTCACTTAATACTC 100 32
NFH28_RS22590 4594700 .. 4594715 -  -3.2  -2.78463   ATTTTGCGGATTATA              CCTGTA ATTT TTCAGG               CGATACCAGATGGCA  43 5
NFH28_RS22585 NONE
        rluF 4592797 .. 4592815 -    -6  -3.53224   TACTGGTCCGGGAAA             CCGATTGT TGA AAAATCGG             GCGAAACGGCAAAGG  60 415
NFH28_RS22440 4571124 .. 4571141 -  -4.7  -3.10796   CGCTATCAGGCAATA             CGCTGCC GGAT GGCGACG              CAGGCGCCTTATCCG  49 100
         pgi 4567623 .. 4567640 -    -7    -5.626   TATCTTATAAAAAAA             GCCGAT GTGAAT ATCGGC              CTTTTTATTATCTTA 100 125
NFH28_RS22425 4567014 .. 4567035 - -11.7  -4.13014   TCCAGAGGGGCAAAA           TAACCACAC CGGA GTGTGGTTA            TGGTTAAACGTACCG  93 44
NFH28_RS22420 NONE
NFH28_RS22415 NONE
NFH28_RS22410 4563419 .. 4563433 -  -2.1  -3.28924   GAGGTTTCTGTATAA              CG-CAC AAAT GTGACG               GGCATCTATATTTTT  45 114
        psiE 4562818 .. 4562837 -  -5.6  -2.75183   AGTTTTATCGAAGTA            CCTGCCCG GCAA CGGGCAAT             GCCACTGCCCTCAAG  50 157
        malK NONE
NFH28_RS22380 4556015 .. 4556026 -  -7.2  -2.57581   CCAACCCAAACATAT                CGCC GAAT GGCG                 GCTGGCGCCTTATTC  57 113
        malM 4554980 .. 4554999 - -11.4  -5.75599   GAAATGATAAAAAAA            GGTGCGCC AGGA GACGCACC             AGTTGCTGCAAAATC 100 59
        ubiC NONE
        ubiA 4553385 .. 4553411 -  -7.3  -3.54543   AGCCAGTGCCTGAAA        TGCCCGAT-GGC GTAA GCTTATCGGGCA         ACTGATATGACGTAT  65 83
NFH28_RS22355 4550354 .. 4550369 -    -4  -2.84839   TATATACAGTTAAAG              GTGATT TTGG AACCAC               AAACGGCGCAAAAAA  46 67
        lexA 4549610 .. 4549662 -  -7.8  -3.17688   TAATCATCTCAGGAA CTGCATTCCCGTAGGCCTGATAAGCG CAG CGC-CATCAGGC-TACACGATTGCCG GATGGCGGCTTACAA  64 57
        dinF NONE
NFH28_RS22340 NONE
NFH28_RS22335 4547469 .. 4547479 -  -6.8  -3.85698   GGTTTTGTCCATAAA                 GTGG AAT CCAC                 CAATAGTTATGTGGT  65 395
NFH28_RS22325 4545647 .. 4545667 - -18.3  -3.70068   TAGCATAACGCTAAA            CCGGAGGCG TAG CGCCTCCGG            TGAAAGCACCTCAGA 100 36
        dusA 4544538 .. 4544561 -  -8.1  -5.27206   GATATATAAGAAAAA          CGCCCTGCA AGACTG CACAGGGCG           TGGTGAGATTGACTA  91 56
        pspG 4544026 .. 4544046 - -12.6  -2.54371   CTCTGCAAAGAAATT            GGGCTTCC ACCCG GGAAGCCC            TTTCTTTTTTTGTTC  81 161
        dnaB NONE
         alr 4540395 .. 4540421 -  -8.7    -3.494   CAATGCGCGATACAA        GCCGGATAAGCG CAAG CGCC-ACCCGGC         CCGCCGCGTATTTAA  71 37
        tyrB 4539007 .. 4539057 -  -9.6  -3.29541   AGGATGATCACAACA GCTATTGTCAGGCCGGAGGGCACT GTT ATCGCCGTCCGGCCTGAATATTAC ATGACAGCGGCAAAT  74 22
        aphA 4538129 .. 4538147 - -10.3  -5.13521   AAATCATGCAAAAAA             GGAGAGC CTGTC GCTCTCC             TGATTTTTAGTACTC  93 32
NFH28_RS22285 NONE
NFH28_RS22280 4537022 .. 4537039 -  -7.7  -3.70104   AAGCAGGCAAGAGAA             GACAGCG ACGA CGCTATC              CGCGAGTCCGCCGCG  65 236
        ssb1 4532654 .. 4532673 - -12.2  -4.69053   TACCAGGTAAGAAAA            TGCCTGGT TTAC ACCAGGCA             TTTCAGCAGACGAGA 100 86
        siiA NONE
NFH28_RS22250 NONE
        siiC NONE
        siiD NONE
        siiE 4510365 .. 4510388 - -12.4  -4.00868   TTATCCATAAGTAAA          CCCCCTCACC CAAA GGTGAGGGGC           CTCCGTTATTATGCG 100 34
        siiF 4508211 .. 4508251 - -13.6  -3.55444   TGCCGACTCGTTAAA  TGACAAAAAAGACCCGTT TGTGC AACGGGTCTTTTTTATTA  AGCAGTACCACCTGA 100 65
NFH28_RS22220 4505407 .. 4505422 -  -6.1  -2.87769   ACGCATCAAACATTA              GGCGA GTATAT TCGCC               AGCGCCGTCTCCTGT  51 171
        soxR 4504651 .. 4504676 - -13.4   -4.4572   AAGACCGGAAACAAA         CTAAAGCGCC CTTAGC GGCGCTTTAG          TTTTAGGTGAGCTCA 100 61
NFH28_RS22205 4503648 .. 4503658 -  -3.2   -4.1711   AGTATGCTCAATAAA                 TCGC CAG ACGA                 TGCGCAAACGTTATC  60 118
        ghxP 4502008 .. 4502040 - -17.2  -4.07885   GATGTGTCCTGAAAA     TG-AAAACGGGCGGC CAAC GCCGCCCGTTTTTCA      GAATGAAGGCAGAGC 100 40
NFH28_RS22195 4500259 .. 4500279 -  -8.4  -2.82742   ACCGGGCCACAAGGA            CTACTGAT TTTCT ATCAGTAG            CGCTTCCATCAAATC  64 5
NFH28_RS22185 NONE
NFH28_RS22180 4498043 .. 4498085 -  -5.7  -3.14132   GGGCGTGCGCATTAA TCTTACCGTTTCCTCCGGCCC TGT GGGTCGGAGGAAA-A-TCAGA ACATCACCCTCGCCA  54 21
        nrfA NONE
        nrfB NONE
        nrfC NONE
        nrfD NONE
       nrfEF NONE
        nrfG 4486557 .. 4486590 -  -5.3  -3.14344   GACTTCCTCGATGAA     GCGTTGCTCTC-CGCC GAA AGCATGAGAGCAATAC     ATACTGAAAGGGTAT  52 314
        gltP 4484749 .. 4484771 -  -2.7  -4.21194   CCGGACTACCCAAAA          GCCATCTCGC TGCT GCAAAA-GGC           CTCTGAAGATCTGGA  58 478
        proP 4477054 .. 4477068 -  -2.9  -2.87344   TATGCCCGCGAGAGA               TTAAG CGAAC CTTAA               GCGCGAAATTTATTC  42 35
        pmrR 4476874 .. 4476889 -    -9  -3.96483   ACCGTACGGAAAGAA              CAGGCA CCCG TGCCTG               GGTGCTGTTGAAAAA  79 55
        melA 4465766 .. 4465786 -  -6.1  -3.64599   TTAGTAGAGGTTAAA            CGCCGGA TCTGCCG TCCAGCG            CGGCTGGAGATTAAC  62 36
        melB 4464186 .. 4464199 -  -3.7  -3.91488   AACTGCGCGAAATAA               CCTGG CAGG CCCGG                CGTTCTCCCGGGCCG  57 109
NFH28_RS22015 NONE
        dmsB 4454604 .. 4454614 -  -3.2  -2.53382   ACCAGCGGTAACTCA                 TGCA TGG CGCA                 CCTCCCGAATGTTCA  42 12
NFH28_RS22005 4453835 .. 4453846 -  -2.2  -5.03747   AAACCGGGCAAAAAA                CTAC ATTG GCAG                 CGTCCACAGATTGTA  71 14
NFH28_RS22000 4453090 .. 4453118 - -12.5  -3.92592   AGCTGTAATAGTAAA       CTGTGCCCGCTG ACGCAA CAGCGGGCAC-G        ATGGCGGCACAAGTA 100 73
NFH28_RS21990 4450285 .. 4450304 - -10.7  -5.97575   AATTTATAAAAAAAA            GCGGCAG ACTACG CTGCCGC             AAATATGAGGAGGAC 100 194
NFH28_RS21960 NONE
NFH28_RS21955 4446556 .. 4446573 -  -8.5  -2.82516   TGTGGGAGCAGTAGA             GTTTGCA AGAC TGCAAAC              AATCCCGGCTTTTCA  57 373
NFH28_RS21935 4443696 .. 4443712 - -13.7    -4.431   CACTTATTCAGAAAA              CCCAGCC TAT GGCTGGG              TTTTTGCTTTTCTGG 100 243
NFH28_RS21925 NONE
NFH28_RS21920 NONE
NFH28_RS21915 NONE
     dnaB-PI NONE
NFH28_RS21905 NONE
NFH28_RS21900 NONE
NFH28_RS21895 4437939 .. 4437949 -  -3.2  -3.10056   ATTAGTCACTCAACA                 CCTC CGG GAGA                 CAAGATAAACAAAAA  45 5
NFH28_RS21890 NONE
NFH28_RS21885 NONE
NFH28_RS21880 NONE
NFH28_RS21875 NONE
NFH28_RS21870 NONE
NFH28_RS21865 4432134 .. 4432151 - -10.5  -5.88565   TGCAGAATAAAAAAA             GGCGCCG TTGC CGACGCC              CTTATGGCCAGTACC 100 273
NFH28_RS21860 4431233 .. 4431256 -   -11  -5.09762   CCTTAATAAAGAAAA          CAGACCTCCC TGAA GGAAGGTCCG           TTATTCAGGGAGGTA 100 55
NFH28_RS21855 NONE
NFH28_RS21850 NONE
NFH28_RS21845 NONE
NFH28_RS21840 4429895 .. 4429914 - -11.4  -5.92337   ACAGATGAAAAAAAA            CGCCGACC GTAA GGTCAGCG             TTCTGTTTGTCAAAT 100 49
NFH28_RS21835 NONE
NFH28_RS21830 NONE
NFH28_RS21825 NONE
NFH28_RS21820 NONE
NFH28_RS21815 NONE
NFH28_RS21810 4426018 .. 4426029 -    -3  -3.02109   AAAATGTCATACAGA                TTTC CTCT GAAA                 ATATGAACAACCTGA  43 5
NFH28_RS21805 NONE
        traD NONE
NFH28_RS21795 4422630 .. 4422656 -  -8.1  -3.14132   TTGTCTGCTGACGAA         GACGCACAAAA ACAAG TTTTGTACGCC         TTCGTCCAGCGCCGA  64 44
        arsR NONE
        arsD NONE
        arsA 4419820 .. 4419853 -  -4.5  -3.41627   CCAGTAACATAAAAC     CTCCTGACAGGGCGAC TTT GCCGCCCTGT-ATATG     CCAAAAAATTAACTC  52 34
        arsB NONE
        arsC 4418064 .. 4418079 - -11.8  -3.73647   TTGAGGCAGGAATAA              GGGGGC GTCT GCCCCC               TTTATGTTTATTTCA  93 33
NFH28_RS21745 NONE
NFH28_RS21740 4413796 .. 4413810 -  -2.8  -3.21199   GATTGATTAATTCAA               CTGG CAAACAT CCAG               ATACTCACAACCAGC  45 7
NFH28_RS21735 NONE
NFH28_RS21730 NONE
NFH28_RS21725 NONE
NFH28_RS21720 4411422 .. 4411434 -  -3.3  -3.06796   TGGCATTGGACTTAA                TCTGC ATG GCTGA                CCTCCTTCTTCGCGG  45 9
NFH28_RS21715 4409505 .. 4409524 -  -2.2  -3.73224   GTAGGCTTTATCAAA            GAAAAG CCCGCGTT CTTTTC             CTCCGGCACAACGGT  51 424
NFH28_RS21710 NONE
NFH28_RS21705 NONE
NFH28_RS21700 4405786 .. 4405808 -    -7  -3.89182   TAACAACAAGTTAAA           GAGTCGGC ATAAACA ACCGACTC           TTTCCGGTCTCATCA  68 45
NFH28_RS21690 NONE
NFH28_RS21685 NONE
NFH28_RS21680 NONE
NFH28_RS21675 NONE
NFH28_RS21670 4399557 .. 4399579 -   -12  -3.59882   AACGATAACAACTAA           CAGCGCTGCT CAT ACCAGCGCTG           TGTTTCAGTAGTTAT  89 37
NFH28_RS21660 4398636 .. 4398658 -  -9.3  -3.64541   CCATGAAATCAAAGA           TAAGAAGGA GGCTA TCCTTCTTA           TTTTCCTCATAGATT  75 39
NFH28_RS21655 4397796 .. 4397815 -  -2.7  -3.79071   TTTACAACACTTAAA            GCCTACC AATAGA GGCTGGC             TTACGTCAATATTTT  52 55
NFH28_RS21650 NONE
NFH28_RS21645 4395052 .. 4395087 - -14.8  -5.75342   CTCCTGTAAAAAAAA    CGGGAAACACCTGCCC GATC GGGAAGATATTTCCCG     TCGGGAGTCAGAAAC 100 327
NFH28_RS21635 4393458 .. 4393489 -  -9.5  -3.55444   TTCGCACTCCTGAAA     GACAGGG-G-CCTCC GGCA GGAGGTCTCCCTGCC      GGGTTGGTGTTATTC  75 85
NFH28_RS21630 4392768 .. 4392804 -   -13  -4.10161   GAGCACTCCTTAAAA   CAGGCGTGCCCCTC-CCC TGC GGGCGTGAGGCACGCC-G   CAGGCGGGTGGTCGT 100 45
NFH28_RS21625 4391619 .. 4391650 - -17.4   -5.7946   TTTTCAATAAAAAAA      GAGGGCATCGTCCC GTGA GGAACAATGCCCTC       ACGGGAGAGTGACGG 100 71
NFH28_RS21620 4390606 .. 4390629 -  -8.1   -5.0538   CCTGAGGGTAAAAAA          TCTGCAGCC GGTGAA GGCTGCAGC           GCGGTTAAATAGTCA  87 49
NFH28_RS21615 4389823 .. 4389840 - -12.7  -5.45652   ATGCTGAACAAAAAA             CGCTCCC GGGC GGGAGCG              CGATGGTGTAATTAT 100 37
        silC NONE
        cusF 4383821 .. 4383835 -  -3.6  -3.58231   AAAGAAGCCATACAA               TTTCTC GCT GAAAAA               TCAAAACACCTGGCA  51 119
        silB NONE
        silA 4379338 .. 4379358 - -10.4  -4.04927   TGAATCAGTAAAGAA            GGACACCC ACAGG GGGTGCCC            TTTCAGGTTCAGGAC  82 34
NFH28_RS21570 4378787 .. 4378815 - -13.2  -2.50492   GATTACCACGAATAT       CGCCGGCA-CAGG AGTG CCTGCTACCGGCG        TCCCGTTATCAGCCG  84 50
        silP NONE
NFH28_RS21560 4376007 .. 4376027 - -16.1  -3.35996   TACCTGGACTGATAA            CGGGACCGC GAC GCGGCCCCG            TTTGCCGAATTAATT 100 35
        pcoA NONE
        pcoB 4371586 .. 4371596 -  -6.8  -4.30978   GTTAACGTATTAAAA                 CCAG ATT CTGG                 CTCCCGCCAGGAATA  74 9
        pcoC 4371163 .. 4371175 -  -2.7  -2.80074   TCGTTCATAATATTA                CTTCA CTG TAAAG                GTGTAATTACCGGTA  41 10
        pcoD 4370201 .. 4370212 -  -4.4  -3.45051   TATGAATGTAAAAAT                CTCA CGCA TGAG                 CTTTGGCTGTCCCCT  54 39
        pcoR NONE
        pcoS 4368076 .. 4368088 -  -4.9  -2.73124   TGTCACCTCCCAAAT                TTCTT CTG AAGAA                CGGTATTAACCTCTT  49 31
NFH28_RS21515 4367373 .. 4367390 - -12.7  -5.72622   TTCAGAAATAAAAAA             CGCTCCC GATT GGGAGCG              TAAACCAGTGATGCC 100 77
NFH28_RS21510 NONE
NFH28_RS21505 4364176 .. 4364195 -  -2.8  -4.86862   CCCAAAAAACCAAAA            CAGATCCC TGTA GAGATCTC             TGTGTGTATCTTCCT  68 40
NFH28_RS21500 4363084 .. 4363106 - -14.2  -3.33696   TTGTCCCTCAAGTAA           GGGAACCTGC CCT ACAGGTTCCC           TTTTCTCGATCACCG 100 58
        fxsA 4356256 .. 4356297 -  -5.2  -2.77861   CGAAGCGAAAACGCA TGGCGTAAGACG-TATCTG TTGGC CGGATAACGCCTCACGCGA CTTATCCGGCCAGCA  49 50
NFH28_RS21455 NONE
        groL 4352591 .. 4352626 - -18.4  -4.37971   AAAAGATGACTAAAA    GAAAAACCCCCGGTCA TTTC TGCCCGGGGGTTTCTC     AATTCTGGGAGATAA 100 162
NFH28_RS21445 4352122 .. 4352152 -   -17  -2.79809   GAAAAACGCTAACCA       TATCGCCCTCTGAA TCT TTCAGAGGGCGTTA       CGATTCAGACATATC 100 39
         efp 4349303 .. 4349324 - -12.3  -3.01831   GCGCGAAAAATAGGA           TGGCGCAGC ATAC GCTGCACCA            TTTTTCCCGATAACG  83 45
NFH28_RS21425 NONE
        ecnB 4348857 .. 4348894 -  -8.6  -4.36914   TGCTTCCGGAGAAAA   TCGATTAACGGTACGAC GCCAT GCCGTACCGTTGAT-GA   TTACTGCTGAGCTCT  84 26
        sugE 4347609 .. 4347620 -  -5.8  -4.93877   TCTGAGGAAATAAAA                CAGC AAAT GCTG                 GCCGTCGCGACCCGG  83 108
        epmA 4342401 .. 4342417 -  -9.4  -4.43221   AAATATGCTACAAAA              TGGCGC TTATT GCGCCA              TTTTATCTCGCGAAA  86 56
        yjeM 4340691 .. 4340712 -  -2.1  -2.91395   ATCCTTTTCATAAAG           CCGATGAGC TAAC GCTATCCGG            ACAAAGATTACTCCG  41 33
NFH28_RS21370 4340262 .. 4340277 -    -6  -4.09685   CGTCAGCGGGTAAAA              CCAGCC GCCC GGCGGG               GAGTTTGTAAACGCA  68 102
         orn 4333817 .. 4333838 -  -4.4  -3.96624   TATTTGCAGGATAAA           CAACAAGC TATCAC GCCTGTCG            CCTATGACAGCTATC  60 365
NFH28_RS21340 NONE
NFH28_RS21335 4332706 .. 4332717 -  -2.2  -3.16881   CACTTACTTCAGTAA                GCTC CTGA GAAC                 TCATTCAGTTGCCGC  44 101
NFH28_RS21330 4332114 .. 4332129 -  -4.6  -3.14132   TGCGCCGTGGAGTAA              TGCCGT CATT ACGGCG               CTGGAAAGCCGCAAG  50 457
         nnr NONE
        tsaE NONE
        amiB NONE
        mutL NONE
        miaA NONE
         hfq 4324585 .. 4324619 -  -7.2   -3.6279   AAACCCTCTTAATAA    CCA-G-CGGGGGCG ATTATCCGA CGCCCCCGACATGG    ATAAACAGCGCGTGA  67 43
        hflX NONE
        hflK NONE
        hflC 4320743 .. 4320778 - -14.2  -4.37092   ATCGCCCTTATAAAA    GAAAACCACCGGCATCC TTT GGATG-CGGTGGTTTTG    CTGGTCTAAAACCGC 100 51
NFH28_RS21275 NONE
        purA 4319038 .. 4319072 - -11.6  -3.10975   AGCGAGGATTTAACA    CTGTGTCGGAT-AGC GTAATG GCTTACCCGACACAG     CAATGTATCACACTG  79 80
        nsrR NONE
         rnr 4315992 .. 4316012 - -11.2  -2.64877   CCTACAGATAATTGA            CCCTCTTC TGTTT GAAGAGGG            TATTGCTCACTCTGC  77 32
        rlmB 4315143 .. 4315180 - -13.8  -3.42663   ATTACCAGTCAAAGA   TAAAAAAAAACCATCC GATTAT GGATGGTTTTTTCTTA    AAAAATACTATCAGC 100 42
NFH28_RS21250 4314495 .. 4314505 -  -5.4  -4.15222   ACCCGCGCCAATAAA                 TCCA CTC TGGA                 TTTACCCGCTTTATC  65 181
NFH28_RS21240 NONE
NFH28_RS21235 NONE
NFH28_RS21230 NONE
NFH28_RS21225 NONE
NFH28_RS21220 NONE
NFH28_RS21215 4307785 .. 4307796 -  -5.8    -3.737   TAATGGTTGATGAAA                CGGT TGTA ACCG                 GCCAGTGGTATTCAC  60 514
        yjfP 4306515 .. 4306535 -  -3.9  -4.60487   GATTACCGGCAAAAA            TGCCAATCC GCA GGTTTTGCA            ACAGCTTGAAGCCCA  69 62
        ulaA 4302884 .. 4302898 -  -2.8  -4.48987   CGGTCATAATCAAAA               CTCCTT ATT AAGCAG               ACTGTTCTGCCAGTT  63 18
        ulaB NONE
        ulaC NONE
        ulaD NONE
        ulaE NONE
NFH28_RS21160 4299634 .. 4299644 -  -6.8  -3.29324   GCCACGGAAAGTGAA                 GCCA ATC TGGC                 GCTGAATGAAGAGGC  56 263
NFH28_RS21150 NONE
        rpsF NONE
        priB NONE
        rpsR 4298046 .. 4298056 -  -2.4  -2.50307   CAAAGTCGTATTAAT                 GGAC CGT GACC                 GATTACTGATGGCGA  39 28
        rplI 4297512 .. 4297542 - -11.9   -5.0133   GATGGGGTTAAAAAA       GCAAAACGTCGGC GCTGG GCCGACGTTTCGT       TGCTAGCAAAAACGA 100 51
NFH28_RS21125 4296141 .. 4296154 -  -5.9  -3.32865   GGAAGAACAAAACCA               GCCGC AGAC GCAGC                CTTTCCAGCAGGATA  56 365
        fklB 4294920 .. 4294960 -   -17  -2.52676   CATCTGCTGAAGCCA GGGTTGCCGGATAA-GGCG TTTA CGCCATCATCCGGCAAACC  CGGGGCGCTTACAGA 100 34
        cycA 4293154 .. 4293181 -   -12  -2.76696   TGGCCGGGGAATAAT        CGCCAGCCGGGCA TTT TGCC-GGATGGCG        GCTGTAAACGGCGCC  79 108
        tnpA 4289896 .. 4289916 - -12.5   -3.8323   AACCCGAAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCAGATGCGCCT 100 106
NFH28_RS21080 4289082 .. 4289098 -  -5.8  -3.78934   GGCGGCGGATAATAA              CTGGCG TCTGG CGCCAA              TCCACAGCGATACGG  63 235
        cysQ 4286187 .. 4286197 -  -2.4  -4.32402   TGGCAATTAAAAGAA                 GAGG GGT CCGC                 CGTCATCGTGCTTGA  60 127
NFH28_RS21060 4285158 .. 4285178 - -16.9  -3.50335   TGCCAGAAACATCAA            CGGCTCCTG ATT CAGGAGCCG            TTTTTTTTTACTTTT 100 66
        tamA 4281034 .. 4281044 -  -4.6  -2.62316   TAAACTCATAATTCA                 GGCC CCA GACC                 GATATAAAACTGTAA  46 5
        tamB NONE
NFH28_RS21035 4276872 .. 4276894 -  -9.9   -5.1925   CCAGAATGTAAAAAA          CAACGCCACC CGAG GGTGGCG-TG           TTCAGTTCAGGGCTG 100 32
         mpl 4270725 .. 4270746 - -15.9  -4.52857   ATGCCCCATATAAAA           CAGCCAGCC ACAA GGCTGGCTG            ACCGCATAGTCATTT 100 39
        iolR 4269399 .. 4269427 - -15.4  -2.64595   AAGTTTCACCACAAT        GCCGATGATCGC TAAAT ACGATCATCGGC        TTGTTTTTTTACTCC  93 34
       iolT2 4266013 .. 4266040 - -17.2  -2.71263   AAGGTTGTGTAACCA        GCGGAGAATATC TCTG GATATTCTCCGC         TAATATTGGAGAGGT 100 42
        reiD 4262051 .. 4262070 -   -10  -5.72622   CCGACAAATAAAAAA            TGGCCGCA GTAT TGCGACCA             TTCTCATGACGATTA 100 55
        iolE NONE
       iolG1 NONE
        srfJ NONE
       iolI1 4257256 .. 4257289 -  -3.7  -2.71712   TTTTCTGCGCCAAAT     TTCCCGACCGTTACG GCGG CGCCACGGTCGCAAC      CTTTTCACTACTGGT  43 353
        iolD 4251968 .. 4251995 -    -2  -5.10163   AACCGCAAAAGAAAA        GCATCCGTAGTTC TGC GAAAAACGGAT-C        GTTTTATTTTGCCGT  71 129
       iolG2 4250847 .. 4250872 -  -8.3  -4.52589   CCTCGGTATAGAAAA         GCTCTCACACT TTTC AGTGCGAGAGT          TTCTTCATTATTAAT  87 49
NFH28_RS20930 4249512 .. 4249540 -  -7.6  -5.03314   CGTAGGGTGAAAAAA       CCGGC-TTTATCA ATCT TGATAAAAACCGG        TTTAATTTAGTGATG  86 82
       iolI2 4248615 .. 4248643 -    -9  -2.91695   GTCACCTGGAAATTA       GCTGTATCATTGC AGCA GCAATGACAC-GC        TGCGATTAATTTGTT  67 3
        iolH 4247639 .. 4247666 - -12.1  -3.55622   GGTAATTGCCGCAAA        TG-ACCGCGCCA GCCTG TGGCGCGGTACA        GGCAAATCCACCCGT  88 43
        pmbA 4245580 .. 4245616 - -11.6  -3.65201   TAATACCCTGAATAA   TTCGGGTTGCAGGCAGC CAAC GC-GCCTGCAGCCTGAA    GTATGACGGGTATTA  87 38
        cybC 4245093 .. 4245142 -  -6.5  -2.79183   GTGATGGGTATTACA GTTTGCCGGATGGCGACCT-GC GGATAAA GCGAAGCCGCCATCCCACAAAA ATTAACGATACTTCT  53 27
NFH28_RS20900 NONE
NFH28_RS20895 NONE
NFH28_RS20890 4243853 .. 4243866 -  -3.1  -5.06414   CCTTTTTAATAAAAA               TCAGCG TTT CGC-GA               CGAAATCCACCCTGT  74 12
NFH28_RS20885 NONE
NFH28_RS20880 NONE
NFH28_RS20875 NONE
NFH28_RS20870 NONE
NFH28_RS20865 NONE
NFH28_RS20860 NONE
NFH28_RS20855 NONE
NFH28_RS20850 4236317 .. 4236355 -  -6.7  -3.42996   CATCAGGCATCACAA  TGT-TGCCGGATGCGGTG CAAG CACCTTATCCGGCCTACA   TGCTTTCTGGACACC  62 513
        mgtA 4226011 .. 4226023 -  -2.7  -4.45544   CGCCAGGAATTAAAA                CAGAT AGA ATCTA                CCGCGAAGATAGTCT  64 413
NFH28_RS20790 4223393 .. 4223409 -  -3.8  -4.48221   TACGAAGGGACAAAA              GATTTA TTCCG TAAATC              CCCAGCGGCGACCTT  66 261
NFH28_RS20760 4216682 .. 4216692 -  -4.6  -4.41633   CATGGCGAAAAAGAA                 CGGC GGC GCCA                 TAACCCTGACCGAAG  68 467
        rraB NONE
        miaE 4214544 .. 4214555 -    -3   -3.3517   ACTCAGGACAGAATA                TCAT GAAA ATGA                 CTTTTTCTGCTCGCC  46 120
NFH28_RS20730 4211522 .. 4211539 -  -7.7   -3.9712   CCAGCCGATGACAAA             GGTC-CGG TTT CCGTGACC             AAAATCATCGACGGC  71 422
NFH28_RS20710 NONE
        lptF NONE
        lptG 4204201 .. 4204242 - -13.9  -3.53444   GGATGGCGGCGGAAA GGACTTATCAGGCCTAC GGGTCATG GTAGGCCTGATAAGCGC  AGCGCCATCAGGCCT 100 54
        idnK 4199073 .. 4199083 -  -2.4  -3.25729   GACAATGATCAGGAA                 GCGC TGA GTGC                 CTGACGAAAAGCCTG  44 8
NFH28_RS20665 4197680 .. 4197695 -  -4.6  -5.72616   ATGGACACAAAAAAA              GCCACC ATTA GGCAGC               TAATTATTGCATCAC 100 42
NFH28_RS20660 NONE
NFH28_RS20655 4193301 .. 4193318 -  -2.7  -2.60615   ACCCTGGGGAAACAC             TGATAAG ATGG CTAATCA              CACTCCTGCCCTAAA  40 36
NFH28_RS20650 4192134 .. 4192162 - -11.9  -3.64541   GGAGTAAACTAAATA        TATCGAGGAGT GGGTCAA ACTCCTCGATA        AAATCAATATCGTCG  89 106
NFH28_RS20585 4171730 .. 4171781 -    -3  -4.08216   TCACTGGTGCGAAAA TCTGGATTATCCATGGCATTCAGC CTTC ACTGAATGCCACAGACAAGCGTTA TTCAACTAAAGCTCA  56 120
NFH28_RS20580 4170383 .. 4170402 -  -2.8  -5.47159   CCGCAACAGAAAAAA            TTACGCTA TGAA TAGCGCCA             CATTACTCTAATTCA  83 252
NFH28_RS20575 4169358 .. 4169388 -  -8.3  -5.55664   TCATCACTAAAAAAA       CAGACGGCAGAAC AAAAA ATTCCGACGTCTG       AACAAATTTAAATAA 100 79
NFH28_RS20570 4168617 .. 4168630 -  -3.7  -4.08216   GCAGGCGCTGGAAAA               GCGCC CCCG GGTGC                AGTGTAAAATGTACG  60 171
        uxuR 4166946 .. 4166966 -  -8.9   -4.4773   CTACAGGAAGTAAAA            CGTGGACTG GGT CTGCCCACG            CTATTCCAGGTATAA  88 41
NFH28_RS20550 4164516 .. 4164537 -  -3.1  -3.92522   CGTCAAGGTCAGAAA           CACACTATCA ACT TGAT-GTGTA           TATAAAAAATGCCGT  55 208
NFH28_RS20545 4163306 .. 4163316 -  -3.2  -4.32034   TTATCACGATGAAAA                 CCTG CAA CAAG                 CGCCGTTTGATAATA  62 456
NFH28_RS20500 4152844 .. 4152856 -  -4.8  -4.84761   ATACCGGGATAAAAA                GCAC GGTTA GTGC                AACGTGGATAAATAA  77 148
NFH28_RS20490 4152504 .. 4152516 -  -3.5  -4.06785   ACATTGAGAAAAAGA                TTAAT GAT ATTAA                TATAAATGATATAAA  57 119
NFH28_RS20460 4143281 .. 4143299 -  -5.9  -2.81872   TTGACCAGAAGAGTA             GGCCGCA GAAGG CGCAGCC             GCTATCCGGCATGGG  50 153
NFH28_RS20455 NONE
NFH28_RS20450 4142554 .. 4142565 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG CAGC CGCC                 ATCCGGCATCTTCGG  63 42
         tsr 4136954 .. 4136967 -  -2.3  -4.07885   GATGCTGGTTTAAAA               TCGGC CTGC GCGGA                CTGCCAGGCCTGGTA  55 122
NFH28_RS20425 4133917 .. 4133943 - -10.8  -2.67662   ATAAAAGAGAGCAAG         CGGCGTGCCA GAAAAAG TGGCGCGCCG         AAAAAAGATGCGGGT  74 57
NFH28_RS20420 NONE
NFH28_RS20415 NONE
NFH28_RS20410 NONE
NFH28_RS20405 4131353 .. 4131364 -  -2.2  -4.17048   TCCCTCTTAAAATAA                CCCT ATCC AGGA                 ACCGAAAATTCCCAC  57 5
NFH28_RS20400 NONE
NFH28_RS20395 4129116 .. 4129163 -  -4.9  -4.00132   AAAGTTAAAAGAGAA TGTCATATATGCCGGGT--GGCG GCTG CGCCTTACCCGGCCTACACATCA TCTTTATCCATAAAC  61 104
NFH28_RS20360 NONE
        bglJ 4121004 .. 4121016 -  -6.9  -3.53012   CTGGTGGTCGCGAAA                GGCGA TGC CCGCC                TGGATAATAAGAAGC  60 339
NFH28_RS20335 4117788 .. 4117801 -  -3.9  -3.37522   ATCCCATGCAATTAA               CTATT GACG AATAG                CTGAAAACCACTAGA  50 434
NFH28_RS20310 NONE
        rimI NONE
        yjjG 4115025 .. 4115035 -  -6.8   -2.8805   ATCAGTGTTTACACA                 GGAG CTG CTCC                 AGTTCGCTTAATGAC  56 1
        prfC 4113300 .. 4113319 - -16.4  -3.33483   CAGGGAAAGTACGAA            GGCGCGGC GGAT GCCGCGCC             CGGAAAGGGATCAGT 100 36
        osmY 4112272 .. 4112298 - -14.5  -2.62184   GTGTGGTGCACATTA        CG-CCTCCCGAC AAAC GTCGGGAGGACG         AATTACGACGAATTA  87 38
NFH28_RS20285 4111972 .. 4111990 - -14.6  -4.28049   GCTAAAACCGTAAAA             GCCAGTCC GCT GGACTGGC             TTGATAGCAATATAT 100 56
NFH28_RS20280 NONE
NFH28_RS20275 4109923 .. 4109934 -  -5.8  -3.75629   TATGGCGAAGCGAAA                GCCT GGCC AGGC                 GCGACGCCGCAAGAG  61 145
        deoC 4106591 .. 4106609 -  -3.9  -2.73124   CGCCATCCGGCAAAT            CAG-AGCT TAGT AGCTGCTG             GCGCTCTTACCGTCG  45 13
        deoA 4105132 .. 4105142 -    -4  -3.23855   TGCTTCAAAAATAAT                 TGAT CAG ATCA                 GTATACAACTATTCA  48 34
        deoB 4103746 .. 4103768 -  -5.6  -3.63922   ACGTGTGTCAAAACA           GTGAAATACC CTA AGTATTTCGC           GTTGTAGGAAGGCGA  59 133
        deoD 4102911 .. 4102943 - -12.1  -4.49556   TGCTGACGAAATAAA     CGATGAAGGGGGCC TGCTCT GGCCCCCTTCA-CA      ATCTTACTCTTTATC 100 29
        serB NONE
        radA 4093096 .. 4093108 -  -5.5  -3.30124   CCGTAGGCCGGATAA                GACGC ATT GCATC                GCCATCCGGCAAATT  56 66
        nadR 4091650 .. 4091694 -  -5.6  -4.42806   GTATTGCCAAATAAA TGTCTGAATGCCGGGT-GGCG CTTG CGCTTACCCGGCCTACAAACC CAGCGATTCCAGTAC  70 97
        sltY NONE
        trpR 4087379 .. 4087429 -  -6.1  -3.33261   TTGTAAGCCTGATAA GCACAGC-GCCATCAGGC-ATTTCG CGG CGATGTTGCCGGATGGCCGCTTCGC CTTATCCGGCCTACG  59 47
        gpmB 4085857 .. 4085867 -    -4  -3.23692   GACGATGAGCAGGAA                 GTAT TCT ATAC                 CACCGCACTGCCGCA  47 296
        creA NONE
        creB NONE
        creC NONE
        creD 4080932 .. 4080952 -  -5.3  -4.46212   CGCGCTACTATAAAA            CCGCCGCCA CGG TAACGGCCG            GGCAAGCGAATGCCA  70 127
NFH28_RS20100 4072376 .. 4072388 -  -3.4  -3.73968   AAATTTGTGATGAAA                GCTA GCATT TAGC                TACGATGATTTCATC  53 122
NFH28_RS20095 NONE
        thrL 4071073 .. 4071095 -   -12  -5.75342   CTGGTCGAAAAAAAA           GCCCGCAC TGTTCAG GTGCGGGC           TTTTTTCTGTGTTTC 100 41
        thrA NONE
        thrB NONE
        thrC 4066262 .. 4066272 -  -8.2  -3.23216   CGCTACGAGCAGTAA                 CGGC ATC GCCG                 GATGGCGGTTACGCC  64 108
         tal 4062765 .. 4062775 -  -5.4  -2.68487   TTAATGATTACAGCA                 GATC GCC GATC                 ATTTTTTCCAGTTTT  50 7
         mog 4061696 .. 4061719 -  -4.4  -3.06515   GCTGATGCCGAAAAT          GGGTCTGACG GATG CGCCTGACGC           TCAGCTACTCGGCGC  47 362
        dnaK 4057811 .. 4057837 -   -18   -2.9518   CTTAACATGCATACA         CGGGCGGAGAGG AAA CCTCTTCGCCCG         TGCCAGTAATTACCC 100 54
        dnaJ 4056596 .. 4056615 - -11.4  -5.29782   TACAGGCAGAAAAAA            GCCCGGAT ATAC ACCCGGGC             TGAAGAAAAATACAA 100 51
NFH28_RS20025 4055303 .. 4055315 -  -4.9   -3.6106   TTTAACACTCCGAAA                TCATT ATA AATGA                ATAATTAACACAAGG  57 124
NFH28_RS20020 4054909 .. 4054924 -    -9  -4.16146   AAAAGACGCGTAAAA              GGCTCA CGGA TGAGCC               TGATACTGCAAATGA  82 44
NFH28_RS20005 4051369 .. 4051386 - -14.1  -4.36914   CCCTGGTGGAGAAAA             GCCCCGG TAAA CCGGGGC              TTGAATCATGAAGCC 100 66
NFH28_RS20000 4048271 .. 4048300 - -11.6  -4.25104   GGGGGCGCAGGAAAA       GAGATTCGAAAG AACGCG CCTTCGAATCTC        AAACTAATAGTCCAG  93 64
NFH28_RS19995 4047032 .. 4047072 -  -2.8  -3.85748   TTATGCGAAAAAAAG TGTCTTCTTG-TTCTGATA TAAA TGTCAGAAGCAATAAAACA  GCCACTCAACGTCGT  52 307
NFH28_RS19990 4046369 .. 4046387 -  -5.3  -5.69473   CAGACGAGAAAAAAA             TCCCGAT AAGGA ATCAGGA             ATAAACCATGCTAAA 100 20
        bcfB NONE
        bcfC NONE
NFH28_RS19975 NONE
NFH28_RS19970 NONE
NFH28_RS19965 NONE
        bcfG 4040150 .. 4040169 - -11.4  -3.58533   CGATAAGTTCGGAAA            GCCTCCCG CTAT CGGGAGAC             GCCTGAAAAATAGGT  87 40
NFH28_RS19955 NONE
NFH28_RS19950 4038457 .. 4038471 -  -5.8  -4.21773   CGTTAAGAGAAATAA               TATCAT TAC ATGATA               AAAAAGTGCTAAAGG  67 502
NFH28_RS19940 4036666 .. 4036679 -  -3.1  -3.58881   AAAGATGATAAAAAT               TGCCGC AAT GCG-CA               TAAAGTGTCTGGAAT  49 371
NFH28_RS19930 4034298 .. 4034328 - -14.8  -3.49938   GCAAATAAGCCATAA       TGTTATGCGGTCGA TAA CCGGCCGCATAACA       TACTTAGTTATGCAA 100 33
NFH28_RS19915 4029690 .. 4029725 - -11.2  -4.86731   TTCCCTGAAATAAAA    GAACCTGATCCGG-CAC AGA GTGACCGGATCAGGTGG    GCATCGCCCTAAGTG 100 69
NFH28_RS19910 4028455 .. 4028473 -  -3.9  -3.81948   TAATGTGAGAAAACA             TATTCAC TCCCT GCGAATA             CTACCTTCAAACAAA  55 32
NFH28_RS19905 4027089 .. 4027146 -  -7.2  -2.98447   GTATTCATGATAAAT CTCCAGTGTATTAA-TCTCATCGCCCC TCATG GGGACCACGAAAATTAATACTCTGGAT TTTTAAGCCGTCCGA  59 87
NFH28_RS19900 4025314 .. 4025331 -  -9.1  -3.56704   TTTTTACGAAATGAA             GTCCGAC TTAC GCCGGAC              TTTTTTAGTGCAGTC  73 60
        nhaA 4024004 .. 4024015 -  -5.8  -2.53213   CAATGTCGCAAGGGA                GCGA TACA TCGC                 TCCCCCTTTCCTTCG  49 47
        nhaR 4023027 .. 4023057 - -18.4  -2.83747   GAACTTGTAGAATGA       TTCCGGCTGCGG GTTAATA CCGCAGCCGGAA       GTATTACGGTAGGTA 100 44
NFH28_RS19870 NONE
        ribF NONE
        ileS NONE
        lspA 4014176 .. 4014194 -  -5.2  -4.45485   ATCAGACCTACAAAA             CCGGATAA GCG CCACCCGG             TATTTACGCTTATGC  71 35
        fkpB NONE
        ispH 4012482 .. 4012500 -    -6  -5.33848   ATTACAACCAAAAAA             CCAGCA ACGATTG TGCTGG             TTTTTCAGATGAATA  91 172
NFH28_RS19840 NONE
        rihC 4010218 .. 4010249 -  -7.2  -4.40963   AGGCGTGAAAAATAA      CTTTCTCGAAGCGG AGAT CAGCTACGGGAAAG       TGGGCAGGCCGGAGA  79 85
        citC NONE
        citD NONE
        citE 4000537 .. 4000547 -  -4.6  -3.20227   CCTTAATCACGAATA                 CCGG AAG CCGA                 CAGCGCCACCACTTT  50 2
        citF NONE
        citX NONE
        citG 3997504 .. 3997527 - -12.6  -3.45743   TATCAGTAAAAGACA          TGATTCATCC CGCA GGATGAATCA           TTGCTGGAGAGAATG  93 54
        dapB 3996482 .. 3996500 - -11.8  -5.26119   GGGGCAAAAACAAAA             GGGCAATA ATA TATTGCCC             TTTGTAATCAATTAA 100 80
        carA NONE
        carB 3991047 .. 3991066 - -10.8  -5.80817   CGCAAGATAAAAAAA            GGGTTTCT TTAC AGAAACCC             TTTCAACATTATATT 100 79
        caiF 3990323 .. 3990348 -  -9.7  -4.64676   GCAGGCCGAAGAAAA         CCGACCGCGCCT GAA AGGCACGA-CGG         ACGTGAAGCCAAAAT  91 128
NFH28_RS19715 NONE
NFH28_RS19710 NONE
NFH28_RS19705 NONE
        fixX 3979267 .. 3979325 - -14.4  -2.57931   TGTAGGCCGGATAAG GCGTTTCCGCCGCCATCCGGCATTGGCG CCA CATGATTGCCGGATGGCGACGCTACCGC ATCTTATCCGGCCAA  87 63
NFH28_RS19695 NONE
NFH28_RS19690 NONE
NFH28_RS19685 3976672 .. 3976686 -  -2.7  -3.38535   TGAAATAATAAGAGA               GCGCC AGCAA GGTGC               CATGTTACGTCACAA  46 186
NFH28_RS19675 3973243 .. 3973261 - -12.4  -3.47915   AAAAAATTGAATTAA             CGCCAGCC AGG AGCTGGCG             CCGTCCTGCCTCCGG  93 310
        kefF NONE
        kefC 3970562 .. 3970578 -  -2.3  -2.80195   ACTGATCATTAATTA              TTTCCTG ATA CAAAAAA              AATTGCCGCCACTAT  40 201
        folA 3970033 .. 3970071 - -13.3  -3.02263   ACATCTGGCTCAAGA  GTAG-GCCGGATAA-GGCG TTT CGCCGCCATCCGGCACTAC  AGCGTTAACGACGCT  86 30
        djlA 3962122 .. 3962151 -  -9.9  -2.57423   ACATTCATTAACGTA       GGCCGGATAAGGC GCTA GCCGCATCCGGCA        ATTCAATCACTTGAA  68 32
NFH28_RS19600 3953926 .. 3953937 -  -3.6  -4.40963   ACCTTTGAAAAACAA                GGCA TTGA CGCC                 GCTCAAATGCCCGGC  66 247
        araC 3948814 .. 3948826 -  -4.8  -3.15544   CGTCAGCGTGATGAA                GCAG GGATT CTGC                TTACCCCGTCCCCCT  52 108
NFH28_RS19575 3947944 .. 3947955 -  -7.2  -2.53213   TAAGCGGTCAAGCCA                GCGC CTCA GCGC                 TATTGGGCATCAAAT  53 93
NFH28_RS19550 3942589 .. 3942611 - -16.4  -5.95539   GCCGAAATAAAAAAA           GCCAGCAGAT ATT ATCTGCTGGC           GGGTGATTTTAGGCT 100 87
        leuO 3935838 .. 3935874 - -16.2  -4.65838   GATATACGCTAAAAA    GCAGAATAAACCAGAA TTTGT TTCTGATTTATTCTGC    CCGGTTTTATCGCTT 100 32
        ilvI NONE
        ilvN 3933192 .. 3933217 -    -9  -5.75945   ATTTCGCAAAAAAAA         GCCCAACCGA TGATAT TGGGTTGGGC          GATAATTCCTGTTGG 100 149
         cra 3931671 .. 3931688 -  -3.4  -4.07885   CACCGCCGTTTAAAA             CGGACT CAATAT AATCCG              AGAAAAATATAAAGT  57 390
        mraZ NONE
        rsmH NONE
        ftsL NONE
        ftsI NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG 3920370 .. 3920392 -  -3.5  -3.87994   AGGCACCGCCACAAA          TTATGTCCGGG CAA CCCGG-C-TAA          CTTCACTGGCGACGC  55 3
        murC NONE
NFH28_RS19445 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ 3914489 .. 3914510 -  -6.7  -3.09208   AAATTACCTATCCAA           CCGAAGTGTA CTA TACA-TTCGG           CGGGCCAGTTTAGCA  58 75
        lpxC 3913474 .. 3913517 - -10.3  -5.90981   GGATAGTAAAAAAAA CGACTGGCTCGCCTGGC CGGAGAGAGT GCCAGGTTAACCAGTCG AATTTTATACGACAG 100 50
        secM 3912720 .. 3912736 - -11.5  -2.79175   AATAAAGTCTCAAAT              GCCCCGC GCC GCGGAGC              TACAAATAAAGTAAA  77 55
        secA 3909868 .. 3909885 - -12.7  -5.28176   TGCATCCATAAAAAA             GGCGCAG TCGC CTGCGCC              TTTTTATCTGTGTTC 100 139
        mutT 3909074 .. 3909097 -  -5.2   -4.1891   GCCGCCGAAGAGAAA          CGAATCGCCA GCAG CGGCGATCAG           TCTGATAGCGACGAC  65 380
NFH28_RS19385 3906267 .. 3906290 - -14.6  -3.32963   AGCGGGATGGGATAA          GGCTGGCGCA CATT TACGCCAGCC           AGAATATTAGAGGCT 100 32
        ampD NONE
        ampE 3900602 .. 3900625 -  -9.6   -3.4252   TTGTAGGCAGCATAA          GCGTTAGCGCC ATC GGCAC-AACGC          TACACTAATGCCCCA  75 25
        pdhR 3895210 .. 3895223 -  -5.3  -3.72695   ACCTGTCCCATTAAA               CTTTC GTGA GAAAG                CTTAATAAGACAGGT  59 115
        aceE NONE
        aceF 3890561 .. 3890578 - -14.1  -5.56568   AGATTATCAAAAAAA             GCCGGCC GTCG GGCCGGC              TTTTCGCTTACATCA 100 33
        lpdA 3888908 .. 3888923 - -10.4  -5.64274   CCATGCATAAAAAAA              GCGGCT GTAA AGCCGC               TTTTTTGTATCGGGT 100 64
NFH28_RS19315 3888052 .. 3888071 -  -4.9  -4.67234   AGCGAAGGCCAAAAA            GATGGCC TGTACT GGCCAAC             CAAAGCAGGCGACGT  71 343
        acnB 3882910 .. 3882926 - -10.8  -5.19251   TAATATGAATAAAAA              GGGGGC AATTA GCCCCC              TTAAAATGTAAATTA 100 38
        yacL 3881330 .. 3881346 - -13.7  -5.24129   TTCTGCTATAAAAAA              GCCGGGA TAC TCCCGGC              TGGAATGTTTGGCGA 100 107
NFH28_RS19285 NONE
NFH28_RS19280 NONE
NFH28_RS19275 NONE
NFH28_RS19270 3876708 .. 3876726 -  -6.6  -3.53012   GCCCGCTGCCGGAAA             CCGTGGTG GCG CACCTCGA             TAAGAGCCATATCTG  60 521
        cueO 3873181 .. 3873200 -   -15  -3.35358   CGAAATAACCATTAA            TGCCCGGC GTAT GCCGGGCA             TTGTGCCGGGTGGCG 100 76
         hpt 3869730 .. 3869742 -  -5.5  -4.56597   CGCTGTTGGGAAAAA                TGCCC GAA GAGCA                ACGTCTGGACGCGCT  73 324
NFH28_RS19230 3868280 .. 3868293 -  -3.1    -3.794   GGGCAACCCAGTAAA               GCTGCA TCA TGC-GC               GATCTCCTTGTTTTT  53 18
NFH28_RS19225 3867426 .. 3867475 -  -8.7  -2.57132   TTGGGTTTCGACAAG CCTCACCTACCGACCCGTAAC-CC ATT GATATTACGGACCCGTAGATGAAG TGAAGCGAAGCGCAA  63 69
NFH28_RS19200 3861613 .. 3861626 -  -5.2  -2.62788   ATATATCATAACCGA               GGCG AAAAAA CGCC                GTCATTGTAGCAAAA  48 60
NFH28_RS19195 3859903 .. 3859920 -  -5.5  -4.59109   GACAGGGGTTAAAAA             TCGGGCA ATAC TGCCTGA              GAATTTCCAAAGCAG  72 475
        hrpB 3850609 .. 3850631 -  -4.2  -3.28368   AGGCAACGTATAACA          CGTCACGAA TACTTC TTCGTG-CG           CCGCGTTGGGGCCGT  50 5
        mrcB 3847923 .. 3847936 -  -5.9  -2.90392   GACCGGGTAAGCACA               GCGCC ACCC GGCAC                TATTACCGTGATTAA  51 37
        fhuA 3845436 .. 3845457 - -13.7   -4.1466   AGCCAACTTGTAAAA           CGGGCACGG CAAG CCGTGCCCA            AAAAGAAATTAGAAA 100 34
        fhuC NONE
        fhuD NONE
        fhuB 3841302 .. 3841318 - -12.3   -3.7829   ACGAGATGCATTAAA              GATGCGG CAT CCGCATC              TTAATATTTAAAAAG 100 383
        stfA NONE
NFH28_RS19110 NONE
        stfD NONE
NFH28_RS19100 3836146 .. 3836157 -  -5.8  -2.53263   TTCATTGGTAATCCA                CCAC CAAC GTGG                 CGCCTGCGTTAAACG  49 0
        stfF NONE
NFH28_RS19090 NONE
        stfH 3834069 .. 3834085 -  -2.2  -3.14931   CTGATGCTGGAGGAA              GGCG TATATCTGG CGCC              ATCGGCGTTTGAGGC  42 230
        clcA NONE
        erpA 3830849 .. 3830860 -  -5.8  -3.30124   CTGTAGGCCGGATAA                GACG CTCG CGTC                 GCCATCCGGCACAAC  56 50
         dgt NONE
        degP 3825435 .. 3825469 -  -5.1  -4.52589   GGGTTTCACAGAAAA    GTGTTG-CCCCCTTCCA TGG CGGAAGGGGGACAA-AG    GTGATTACTGCATCA  71 30
        cdaR 3824060 .. 3824077 -  -6.3  -3.31263   AGCCGATCTGGACAA             GCTTACC CGTA AGTAAGC              TGTGTGTTGCCGGAT  59 112
NFH28_RS19030 3822116 .. 3822134 -  -8.1  -4.21275   TTAAGCGAGTGAAAA            GCGGGGGC GACA GCCCCC-C             TTTGCATTACGGCGA  76 32
        rpsB 3816177 .. 3816197 - -11.1  -4.89729   TATAAAAGTGAAAAA            GGGGGCC ATATACA GGCCCCC            TAACCAAACGTGATA 100 199
         tsf 3815231 .. 3815252 - -13.7  -4.61633   AGAGAGGCGCAAAAA           GAAGCCGCC CTCA GGCGGCTCC            TCAGGAAAATCAGGA 100 35
        pyrH 3814264 .. 3814282 -  -5.3  -4.11751   ACGAATCCTTGAAAA             CTAGTCT CAGTC AGACCAG             ACGGTCACACAATAT  63 135
         frr 3813581 .. 3813630 - -16.5  -5.16151   GAAACGGAATAAAAA GCAAAACGCCGCACAGGAGACCT GATA ATGTCTTCTGCGCGGCGCTTTGT ACACCACTCATCCGC 100 83
        ispC 3812229 .. 3812246 -  -8.4  -5.28176   TGTATCCACAAAAAA             GCCGTG TAAAAC CACGGC              TAACCTGACCGAAAA  95 130
        ispU NONE
        cdsA NONE
        rseP 3809041 .. 3809058 -  -2.7  -3.33696   GTTCTTCCTAACTAA             CTCTC TTACAACC GAGAG              AAATCATTGAAAAGT  46 13
        bamA 3806578 .. 3806591 -  -2.4  -3.24747   TCGCTACACTACCAA               TGCA TTCCTT TGCA                GTGAACAATTACCAG  44 34
         skp NONE
        lpxD 3804900 .. 3804933 - -13.1  -3.57992   AAGGCAATAATAACA     CGGCCTGCCGCAATC GTAT GAATGTGACAGGCCG      GAAAAGAATGGCAAC 100 55
        fabZ 3804403 .. 3804413 -  -4.6  -2.57136   TTATCAATCACGAAT                 CAGG CCT CCCG                 GCTACGAGCACACAT  46 14
        lpxA NONE
        lpxB NONE
        rnhB 3801872 .. 3801883 -  -5.8  -3.01243   TCGATACAAGAATCA                GGAC ACAA GTCC                 CAGAGCGCGTTTAAC  52 11
        dnaE NONE
        accA 3797347 .. 3797367 - -16.9  -5.52384   CCTCGACCAAAAAAA            GAGGCCGGA TTA TCCGGCCTC            TTGGGGAAAAATGAG 100 49
NFH28_RS18925 3795412 .. 3795438 - -15.2  -3.79849   TAAGCATAGTAACAA         TCCTGCCGATGC AAA GCACCGACAGGA         TTTATCTTATTACAA 100 35
        ldcC NONE
NFH28_RS18915 NONE
        tilS 3791050 .. 3791065 - -10.4  -4.18018   GTCGGTCAGGGAAAA              GGCAGC TTAT GCTGCC               GCGAACTTACTGGTG  86 392
NFH28_RS18895 NONE
        arfB NONE
        nlpE 3788980 .. 3789000 - -16.9  -3.74077   CGGCAGATATGTAAA            GGCCTCGCA CCC TGCGAGGCC            TTTTATTAGTGAGTG 100 31
        gmhB 3782431 .. 3782445 -  -6.4  -3.12351   CTCTTTCAGAGTCAA               CCCTGA ATT TCAGGA               TTTTTCTCTTCAACC  56 169
NFH28_RS18845 3780648 .. 3780661 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 46
NFH28_RS18840 3780487 .. 3780502 -  -7.6  -3.17075   GCGTGGTGAAGCGAA              GCATAC TGAA GTATGC               GAGCTTTGCCACAAC  62 59
NFH28_RS18835 3780292 .. 3780325 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTCGTAAAC  69 51
NFH28_RS18830 3776993 .. 3777004 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 102
         rrf 3776752 .. 3776762 -  -5.4  -3.16564   CTGGCAGTTTATGAA                 TCAC TTC GTGA                 TTCACCCTTCGGGCC  54 135
NFH28_RS18820 3776572 .. 3776593 - -15.9  -5.31519   ACATGGAAAGAAAAA           GCCCTGAGC TAAT GCTCAGGGC            TCTTAATAAGTGGCG 100 36
        dkgB 3775584 .. 3775601 - -11.3  -3.97043   GCGAATATATAAGAA             CAGCTCC CGCA GGAGCTG              TGAAAGAGGGGTAAA  91 60
NFH28_RS18805 3773322 .. 3773335 -  -3.8  -2.75481   CTGTAACGTCAACCA               GTCC TCAACC GGAC                TGGTTCTTCTGTTAT  45 111
NFH28_RS18800 3772443 .. 3772467 -  -7.7  -3.62607   TATGAGAAAAATAGA          GGGCAGCACCC GCA GAGGCCTGCCC          CACGGCAGACCTGAC  69 47
NFH28_RS18795 3771610 .. 3771630 - -11.1  -4.49644   ACGAAAAAGCCAAAA            GGCGCCG CTTCCCC CGGCGCC            TTTTAAATTGCTATA  93 36
NFH28_RS18780 3768431 .. 3768448 -  -3.3  -4.21989   CATAACTGGAAGAAA             CGCGGCT GGAA AACAGCG              GAAAAGAAACCCGTA  58 211
        dnaQ NONE
NFH28_RS18765 3767093 .. 3767117 -  -8.6  -5.94597   GAAGACGAAAAAAAA          CCGTATCCCT TTTAC AGTGATACGG          TTTTTTTTACTTCAC 100 73
        tssH NONE
        tssB NONE
        tssC 3755502 .. 3755515 -  -3.8  -2.57772   TCACAAAATATATAT               CAGG CATTGC CCTG                CTTCACTGACGGCAG  44 11
NFH28_RS18715 3755225 .. 3755251 -  -2.9  -3.75292   ACTGAGTATCAATAA         CAGCCGGGCAA CTGAC TTCCCAGGCTA         CAGCATATTGTGAAA  52 102
NFH28_RS18710 3754780 .. 3754799 -  -3.6  -3.16881   TAGTTATTTTATGAA            TTTGCATT ATTT AATGCATA             TAAATAATGCTTCAT  46 95
NFH28_RS18705 3754094 .. 3754118 - -10.7  -5.10656   ATCAAAACAATAAAA          CCAGCCAGACA TAA CATCTGGCCGG          AAAAACAGCCGTTAA 100 37
NFH28_RS18695 NONE
NFH28_RS18690 NONE
NFH28_RS18685 3752308 .. 3752333 - -17.7  -4.71463   AATCAAAATAATAAA         TCCGGCCAGAT ATAA ATCTGGCCGGA          AAAACAGCCGTTAAA 100 36
        tssJ NONE
        tssK NONE
        tssL NONE
NFH28_RS18665 3748187 .. 3748209 -  -4.9   -2.5474   TGGCAGCGATAACAT           TATCACAGG GTATA CCTGTCATA           CTTCAGGCTGCATGT  48 131
NFH28_RS18660 NONE
        tssM NONE
NFH28_RS18650 NONE
NFH28_RS18645 NONE
NFH28_RS18640 3741715 .. 3741725 -  -6.8  -3.45324   CACCGTCAGGAAACA                 GTGC CCC GCAC                 TTTATAATGCAACCA  62 356
NFH28_RS18635 3739473 .. 3739484 -  -4.4  -2.66733   GTTTAATTCAGATCA                CTCA GAGG TGAG                 AAGGGGGGCAATATC  46 11
NFH28_RS18630 NONE
NFH28_RS18625 NONE
NFH28_RS18620 3734594 .. 3734625 -  -5.2  -4.84311   GGTTAGATAATAAAA      CAGCCGGG-AAGA GTTAACT TCTTACCCGGCCA      ACTATTATTTAATAC  75 30
NFH28_RS18610 3733052 .. 3733079 - -10.8  -3.74928   ATACCAATGTAATAA        GGTTTATTTGCTC CAG GAGCAAAT-AACC        ATAAACCCTATAACC  85 203
NFH28_RS18605 3732214 .. 3732241 -  -2.7  -5.02606   GATTAAATAATAAAA        TCCGGG-AAGAC AAAAG ATCTTTCCCGGC        TTTTTATTTTCATTT  70 41
NFH28_RS18595 3731538 .. 3731551 -  -3.1  -3.05274   TAAAGGCATAAATGA               GCATT CACT AACGC                AATTATTTTCAACCA  45 45
NFH28_RS18590 3730681 .. 3730696 -    -9  -3.85698   TGGTGGCTTCAGAAA              TACCGG CCTC CCGGTA               GACATCTTTAACAGT  77 509
NFH28_RS18575 3728757 .. 3728799 -  -6.5  -2.92142   AAGAAAAATAGATGA TTTGATGTGTATTGCGCCTT AAAC AAGGCACAATACAC-TAATA GTTGTTTACTATTAA  55 37
        safB NONE
NFH28_RS18565 NONE
NFH28_RS18560 3724684 .. 3724700 - -12.3  -2.66034   ACAAACCTTATACCA              GGGGCTT ATA AAGCCCC              GCTCACAAAAGAGTG  81 289
NFH28_RS18555 3723265 .. 3723279 -  -4.2  -4.20516   CGTTCACCTAACAAA               GTATCC CGT GGAAAC               AAGCAAAACATCGCC  62 483
NFH28_RS18545 3721885 .. 3721902 - -11.3  -3.65542   GGCATCGTCAAAAGA             CGACTGG CTGA CCAGTCG              CATATCTCGATGCCT  87 98
NFH28_RS18540 3721549 .. 3721563 -  -2.8  -5.07053   AAGCATTTCAAAAAA               TCACTA TGC TGGTGA               TGAACATACCGCTTA  76 105
        lpcA 3715477 .. 3715495 -    -6  -3.88291   TATCACCTCCACAAA             CGCCTT AAGCGGG AAGGCG             TAATTTTTACAGCCA  66 203
NFH28_RS18510 3714231 .. 3714243 -  -6.2  -3.55444   GGGTTAGGCCCGAAA                CGCC GTCAG GGCG                ATTTTAAAAGTCCGG  57 475
        prfH 3710575 .. 3710597 -   -12  -3.10173   AGAAAGCGCTAAAAT           GCCCGTCC CATTTCT GGACGGGC           TATCAATATGGAATA  81 144
         gpt 3708357 .. 3708381 - -17.1  -4.78572   TTGTAACCAATAAAA          CAGCGCCCGGC ATT GCCGGGCGCTC          TGAAAAGCTGCTGAT 100 40
        frsA 3707069 .. 3707081 -  -2.7  -3.17586   ATCAATCTATTAACA                CAATC TAT GATTA                ATCCAGTCGGTAATT  45 7
         crl 3706261 .. 3706275 -  -9.2  -2.75267   AAACCCGCAACATGA               CGCCAG TTT CCGGCG               GATTTGCCAATAAAA  60 354
        proB 3704126 .. 3704139 -  -3.1  -3.18264   TTCCTTATCGAGTAA               TCATG TCAT CACGA                TGAACAGCGACCGGG  46 1
        proA 3702780 .. 3702793 -  -5.3  -3.30619   AATCACGGGGTAGAA               GGTTA AAAC TAACC                GGGCGGTGCGTCAAT  54 85
NFH28_RS18450 3702336 .. 3702348 -  -4.1  -3.94746   CCAGACGGAACTAAA                TCACC TGT AGTGA                GGAAGATGCGCTATG  58 339
NFH28_RS18335 3692214 .. 3692230 - -13.7  -2.59954   ATAGATAGTAAGTTA              CCCGGCA CCA TGCCGGG              TTTTTACTGCCCTTT  86 29
NFH28_RS18325 3691151 .. 3691166 -  -3.2  -2.62263   ACTGGTGGTACATCA              GGCG TTTTATGG CGCC               GGATGAGGGAACAAC  42 16
NFH28_RS18320 NONE
NFH28_RS18315 NONE
NFH28_RS18310 NONE
NFH28_RS18305 3688324 .. 3688345 -  -8.7  -5.40464   CACCACAAATAAAAA           GGCCTGC-GA TTA CCAGCAGGCC           TGTTACCAACTCAGC 100 52
NFH28_RS18300 NONE
NFH28_RS18295 NONE
NFH28_RS18290 NONE
NFH28_RS18285 NONE
NFH28_RS18280 NONE
NFH28_RS18275 NONE
NFH28_RS18270 3685730 .. 3685741 -  -2.2  -2.71144   GAGTTGGGCTAAGCA                TGGC TATC ACCA                 CCTACAAGCCGCTTA  40 7
NFH28_RS18265 NONE
NFH28_RS18260 NONE
NFH28_RS18255 NONE
NFH28_RS18250 NONE
NFH28_RS18245 NONE
NFH28_RS18240 3683287 .. 3683310 -  -8.1  -4.87318   TTTAAAACGCAAAAA          GCCCCGAGC GGTTAA ACTCAGGGC           TTTATTTAACGAGTG  86 133
NFH28_RS18235 NONE
NFH28_RS18230 NONE
NFH28_RS18225 3681715 .. 3681743 -  -6.8  -3.19389   GAAGGCAGCTATGAA       CGCCACAGACATC CCGC AATG-CTGTGACG        CGGTATCATCTTTTT  59 127
NFH28_RS18220 3681285 .. 3681295 -  -5.4  -4.12532   GCGGGCATAGACAAA                 TGCT TTA AGCA                 CGGACAGTAATGGGC  65 83
NFH28_RS18215 NONE
        terL NONE
NFH28_RS18205 NONE
NFH28_RS18200 NONE
NFH28_RS18195 NONE
NFH28_RS18190 NONE
NFH28_RS18185 NONE
NFH28_RS18180 NONE
NFH28_RS18175 NONE
NFH28_RS18170 NONE
NFH28_RS18165 NONE
NFH28_RS18160 NONE
NFH28_RS18155 NONE
NFH28_RS18150 NONE
NFH28_RS18145 NONE
NFH28_RS18140 NONE
NFH28_RS18135 NONE
NFH28_RS18130 NONE
NFH28_RS18125 NONE
NFH28_RS18120 NONE
NFH28_RS18115 3664543 .. 3664556 -  -5.9   -5.4505   CCGGGTAATAAAAAA               CCCGC CGAA GCGGA                TTAGTGTTTTGTCTA  87 403
NFH28_RS18110 NONE
NFH28_RS18105 NONE
NFH28_RS18100 NONE
NFH28_RS18095 NONE
NFH28_RS18090 3658731 .. 3658756 - -16.3  -4.30396   AATCAAATAGATAAA         TAAACGGCTGC ATAG GCAGCCGTTTA          TAATTTATGTTGTTA 100 30
NFH28_RS18065 3653879 .. 3653905 - -11.2  -3.22884   GTAGTAAGTTATGAA         CTATATATTTAT TCA ATAAATATATAG         ACATTAATTTGACGA  81 141
NFH28_RS18060 3652424 .. 3652434 -  -3.2  -5.04325   TGGAAAGTATAAAAA                 CACA CTT CGTG                 TCTATAATCAGAAAC  74 33
        leuC NONE
        leuD NONE
NFH28_RS18045 NONE
NFH28_RS18040 NONE
NFH28_RS18035 3647425 .. 3647450 -  -6.9  -2.66912   ACGTAAGTCAGAGCA         TCTGGCGCCA CGACAGT TGGCGCC-GA         CTGATCACAGTACGC  55 30
NFH28_RS18025 3646113 .. 3646136 -   -14  -2.62613   TTTGATGGGAAATAT          TCAGGGATAC GATC GTATCCCTGA           GGCAAGCCAGACTCA  86 38
NFH28_RS17995 3638732 .. 3638742 -  -2.6  -3.90328   GACAATGGCGATAAA                 TATT ACA AATA                 TAATCAGTAACGTTC  54 29
NFH28_RS17985 NONE
NFH28_RS17980 NONE
NFH28_RS17975 3634770 .. 3634780 -  -3.2  -3.20573   GCATTTAGATTAAGA                 GCAC CTA ATGC                 GCTTATTACCAGTCA  46 340
NFH28_RS17970 NONE
NFH28_RS17965 NONE
NFH28_RS17960 3633127 .. 3633146 -    -5  -3.06839   TCATTAAATAATAAC            GCGTTC TTGCTTCT GAACGC             CGTCAAGGAACTATA  51 28
NFH28_RS17955 3632669 .. 3632702 - -18.1  -3.61103   CAAGGTTAGCCCAAA     TAGCGCCCGCGTCGC CAGT GCGGCGCGCGCGCTA      AACAGGCATATATTA 100 55
        golT NONE
        golS NONE
        golB 3623280 .. 3623294 -   -10  -2.81088   AAGCGACGTAACAAG               GTAGCG TTG CGCTAC               TTATTTGTTATCTTT  71 216
NFH28_RS17920 3621887 .. 3621913 -  -7.9  -4.10453   GAAAGGGCGTGAAAA         CGACGGGAGGA AGGCG TGCTCCCGGCG         ACAGTATGCGCCAGG  74 51
NFH28_RS17915 NONE
NFH28_RS17910 3616732 .. 3616760 - -10.2  -3.40299   TTAGCACAGGGAGAA        TGACCGCAACGC TCGCT GCGCGGCGGCCA        TTTTATATGGTCTAT  76 75
        ssaA NONE
NFH28_RS17900 NONE
        cydB 3613857 .. 3613884 -    -4  -2.78384   CGCTGGCGCACCATA        TCGCGACCATCC ATAC GACTCGCCGCGA         CCATTTTTTCACTTT  45 46
NFH28_RS17890 3613668 .. 3613681 -  -2.3  -3.34242   GAGAATAATTATCAA               CCGCT ATTG AGGGG                AGAGATAAGGCGAGC  45 8
NFH28_RS17885 3612546 .. 3612557 -  -7.2  -2.62396   TAGCGGCGGATATTA                CCGC TCTG GCGG                 GGCGCGTTACGCACA  57 32
        foxA 3610067 .. 3610080 -  -5.9  -3.89346   CGCTTAGCGCAGAAA               CGCCC ACAT GGGCA                AGGTTAATGGCCTGG  63 255
        yahO 3609086 .. 3609110 - -12.2  -3.72374   TGCCAGGAATAAATA         TACCCGCC-GG AAAC CCAGGCGGGTA          TTTTTATGATGCAAT  93 45
        prpB 3606163 .. 3606198 -  -8.2  -3.53811   CGTAGGCGGGTTAAA    CGTAG-TGCCATCCGGC ATT GCCTGATGGCGGCTTCG    CCTTATCAGGCCTAC  67 44
        prpC NONE
NFH28_RS17850 NONE
        prpE 3601050 .. 3601060 -  -8.2  -2.70932   CCTTTCCGTGAAGCA                 GCGG GTA CCGC                 GTTAAAAGGCGACCG  57 472
NFH28_RS17835 3596913 .. 3596936 - -15.4  -3.61715   CATTCCTTGCAATAA          TGCCCGTCAA GTCC TTGACGGGCA           TTTTTCAGTTTAAAT 100 69
        iprA 3595802 .. 3595822 -  -6.8  -3.38812   GCCCCTGTAATAATA            CGCTGGCA GCCAT TGGCAGCG            GTGGGGTCTATTCTA  58 474
        sbmA NONE
        yaiW 3592071 .. 3592084 -  -2.3  -4.08767   TTCACTCTCTCAAAA               TCGCT GTTC AGCGG                GAAGCATCGAGAAAC  56 334
NFH28_RS17805 3591286 .. 3591304 -  -5.3  -3.51825   CGAGGTGAATGACAA            GATCCGCG CGAT CGCG-ATC             CAGGCTTATCAGACG  55 285
NFH28_RS17795 NONE
NFH28_RS17790 3588240 .. 3588265 - -14.1  -3.03781   TTAATTTAAACCATA         TCGTAACGGCA GAAG CGCCGTTACGA          TGCACCGCTATTGGC  89 33
        iraP 3587607 .. 3587663 - -23.5  -2.82635   ACTGTTATTACCATA GCCGCTTCGTTTTTATTTTGCTCTG TATTACC CAGAAGAAAATAAAAACGAAGCGGC TATGTTATTTCATAA 100 78
        psiF 3587007 .. 3587040 -  -6.8  -3.85704   GGAGGAAGTATGAAA     TTTCGGGTGAGT GTTTTTCAGG ACTCACCCGATA      GCACTACGCCGCTTT  66 29
        adrA 3585668 .. 3585683 -  -6.8  -3.61371   AAATGGTACTCGAAA              CCGGAA AGCA TCCCGG               CGAACTGAAAGATAT  60 182
NFH28_RS17765 3584257 .. 3584270 -  -8.1  -3.14132   GCGTTCCCCCAGGAA               CTGCG CATA CGCAG                GATTTGATATCAGCA  64 176
        aroL NONE
NFH28_RS17755 3583437 .. 3583453 -  -2.1  -2.64877   TGGAGATACAATTTA              GGGGTAC TCA GAATCCC              TTCCGAGTGGTTCAT  39 45
NFH28_RS17750 NONE
        ppnP 3582156 .. 3582185 - -12.9  -2.72344   GCGCAGCGCTAACCA       GAGGGCCCCTCTCC GCC GGAGAGGGGAC-TC       ACCGTTACAAATAGC  85 30
         mak 3579963 .. 3579973 -  -8.2  -4.13767   CCTGCTACTGCAAAA                 CGCC AAA GGCG                 GCGAACTGCTGGGCG  77 259
        phoB 3573554 .. 3573595 - -15.3  -3.85389   CCTCAAGAATGGAAA GCCTTCTCCGCCAG-AAACC TGT GTTCTACTGGCGGAAAAGGC ATTAAAAGCGGGTCG 100 27
        phoR 3572184 .. 3572205 - -13.1  -4.90525   TAACTGCAAAGAAAA           TAAGCCAGC ATCC GCTGGCTTA            TGGAAAGTTATACTT 100 52
        brnQ 3570460 .. 3570482 - -16.3  -5.64304   CAACACAATAAAAAA           CCACGGGGC GTTAA GCCCCGTGG           TGTACACATATGTCA 100 47
        proY 3569001 .. 3569053 -  -9.2  -2.66216   CTCCAGGAGGAGAAG CGGCTCCGC-TTATCCGGTCTACCG TTGC CTGCAGACCGGATAAGGCAGAGAAA AACGACTACGCCTGC  66 31
        malZ 3567027 .. 3567044 - -12.7  -4.42653   AGTGCATTGATAAAA             GGCTCGC GAAT GCGAGCC              TTTTTTATGCGTAAG 100 61
        queA 3564301 .. 3564327 -  -6.6  -2.72344   TCCGACGTTTAACGA         CTCGCTACGGAA TGA TTCCATAGCTAA         TAAATTCCCGAAGAC  55 155
         tgt 3563141 .. 3563157 -  -5.1  -3.54779   ATTAAAATTAATCAA              CGTTCAA AGG TGGAACG              GGTCGCCCCTGACGT  56 1
        yajC NONE
        secD NONE
        secF 3559877 .. 3559896 -   -10  -6.04953   ACATAAATAAAAAAA            TCCCGATC GCAT GACCGGGA             TTCAGATAACACTTA 100 50
NFH28_RS17655 NONE
NFH28_RS17650 3558665 .. 3558680 -  -3.2  -3.29461   CAACCCGTTTTACAA              GCGTTA GAGG TATCGC               TATCACATCTTACGG  48 35
        yajD 3557971 .. 3557990 -  -6.4  -6.20267   TTAAAAACAAAAAAA            TCCCAACC TTGC GATCGGGA             TTCCAGTGACAATGT 100 208
        nrdR NONE
        ribD NONE
        ribE NONE
        nusB 3553086 .. 3553128 -  -5.6  -5.61277   CAGAAAAAAAGAAAA GGCCGG--AGACGGCGGG TATCGAGCG CCCGCTATCTTTCCGGCC TGTGAATCACTTTTT  93 32
        thiL NONE
        pgpA 3551336 .. 3551350 -    -7  -3.72576   TGGCTGCTCAGCAAA               CGAGGC GTC GCCGCG               CCGATTATCGGCGCT  62 261
        thiI 3545729 .. 3545758 -  -8.5  -3.22818   AGAAATAAAACGATA       GGCCGGGTAG-GAC ATA GCCGCCACCCGGCA       AAGGAATTACGGACG  67 32
        phnW NONE
NFH28_RS17540 3538883 .. 3538927 - -13.7  -3.34517   ATGGCGGCGTAAACA CCTTATCCGGCCTACAAAACG GTA CAGTCTGTAGGCCGAATAAGC GACAGCGCCATCCGG 100 49
NFH28_RS17525 3536619 .. 3536666 -  -5.5  -3.90112   CTGTTGGCAATGAAA GGCGTAAGCGAAGCGCTGATC GTGGCG GAAGAGCATTCCGCTTACGTC AAAATCGACAGCAAA  61 132
NFH28_RS17510 NONE
NFH28_RS17505 3531749 .. 3531769 - -11.1  -5.08824   TTGCTATTGAAAAAA            CCGCCGTGT CAC AAACGGCGG            TTTTTTTATCCATTT 100 65
        bolA 3523689 .. 3523702 -  -9.5  -5.23292   TCAGACAAAACAAAA               CGGCC CGCA GGCCG                TTTTCACATAATTCT 100 86
         tig 3522061 .. 3522082 - -11.6  -5.94713   ACGTGACAAAAAAAA           CCCGTCAC TGAAAG GTGACGGG            TTTTTGTGCAAATTT 100 61
        clpP NONE
        clpX 3519674 .. 3519692 -   -11   -4.3623   ACAGGAAAAACGAAA             GGGGAGAT AAA ATCCCCCC             TTTTTTGGCTAACTG  90 58
         lon 3517123 .. 3517152 -  -8.6  -5.72616   AGCTATACAAAAAAA       GGCTGGCAAGTCC GAAAT AG-CCTGCCAGCC       CTGTTTTTATTAGCG 100 58
        hupB 3516649 .. 3516668 -   -10  -5.45652   ATCGCCAATAAAAAA            GGCACATC AGTT GATGCGCC             CTTGTACTTTGTCAC 100 61
        ppiD 3514479 .. 3514494 - -11.8  -4.39571   CTCAGAAATGGAAAA              GGCCGC GAAA GCGGCC               TTTGTGGGATACAAC  95 73
NFH28_RS17430 3513960 .. 3513982 - -10.7  -3.00601   TAAACGACAAGTACA           GAGGTCATA ACTGG TATGACCTC           TACAGTCTGGCAAAT  76 61
        fadM 3513135 .. 3513161 -    -5  -3.54741   GATGAGTTCGTCAAA         GCGCTGAATCAC GCG GTGAATCTGGGC         ATGGCGAAAGATATC  55 380
         cof 3509995 .. 3510013 - -10.3  -5.76633   CCATAGACAAAAAAA             GCCAGAC TGAAT GTCTGGC             TTGCTGGAAGAGATC 100 43
        tnpA 3509285 .. 3509305 - -12.5  -3.91294   GAAACCAAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCAGATGCGCCT 100 106
        decR NONE
NFH28_RS17390 NONE
NFH28_RS17385 3504006 .. 3504022 -  -6.5  -5.31519   ACAGGGAAAGAAAAA              CGCACCA CGA CGGTGCA              TGATGGGCGAGGTTT  87 60
        glnK NONE
        amtB 3502093 .. 3502111 -  -4.4  -5.33848   ATCACAATTAAAAAA             CATGCCGC TAT GCGGCGTT             AATGGCCTGATGACG  84 102
NFH28_RS17365 3500412 .. 3500432 - -16.9  -3.14132   CGCTGGGTGTATTAA            CCCTCTCCG TAA CGGAGAGGG            TTGGCGCAGGATTAA 100 37
         ffs 3499693 .. 3499703 -  -6.8  -2.64872   GCCAGGCAAGAACAG                 TGGC TAC GCCA                 GCATGGCGTACATTA  51 163
NFH28_RS17345 NONE
        ykgO 3497562 .. 3497585 - -10.3   -5.4505   GCCGGTAATAAAAAA          GTGCGCACC CTCCCT GGTACGCAC           TGCTTTCCCTGAACT 100 50
        acrR 3489935 .. 3489955 -  -4.8  -4.61868   TAGCGACACAGAAAA           TGTCCAGGA GTTT TCCTGGA-A            TATTATCAGGGGGAG  73 31
        mscK 3486295 .. 3486322 -  -9.8  -4.57341   AAGGGCCTGCAAAAA        GGCCTTGAGCAA GGGT TAGCACAAGGCC         GTGAGGCCGAAGCGC  91 183
NFH28_RS17280 NONE
         apt 3483514 .. 3483538 - -16.5  -3.09671   AGGGTAATGCTAACA          CAACCTCGCCG ATA CAGCGAGGTTG          TCTCTCTGGCTAAAA 100 62
        dnaX 3481514 .. 3481532 -  -9.6  -3.30124   CTTGATGGTTCACAA             TCGCAAGC CGG GCTTACGA             TCAAATGGGGCGGAT  74 26
NFH28_RS17265 3481165 .. 3481178 -  -2.3  -2.64099   GGTTTGCATCAGAAT               GGCAT CTTA AAGCC                TGGCGGCAGTTGCAT  39 5
        recR 3480461 .. 3480477 -  -3.7  -3.67558   GATAGACCTCAACAA              TGCCATT TTT AATGGTA              AAAATACGTTGAGGG  53 101
        htpG 3478470 .. 3478498 -  -5.2  -5.31877   AGGTATTATAAAAAA       TGCCGGAT-GGCG CTGG CGCTTATCCGGCC        TACAAACAGTACTCG  82 95
         adk 3477581 .. 3477612 -  -4.3  -3.30441   CAGTAGGCCGGATAA      GGCGTTCAG-GCCG CCATC CGGCACCGATTGCC      TGATGGCGTTACGCT  52 96
        hemH 3476483 .. 3476507 -  -4.2  -3.21416   TATGGCGAGGATGAA          GACGCCGC GTTAACGGT ACGGCGCC          GTGAGTTTCAGCATC  48 10
         gsk 3473707 .. 3473731 -  -7.8  -3.14211   ACCCGCGTGGATGAA          CTGCGCGAAC GCGGG ATTCGCGCCG          TACTGGGCAACGCCG  57 361
        ushA 3468734 .. 3468750 -  -5.8  -4.56597   TCTGGGCGCGAAAAA              GGTCGA TATGG CCGACC              CGATGGTGGCGCAAC  75 357
        cueR 3463326 .. 3463337 -  -5.8  -3.13522   ATGCGCTGACGAAGA                CCTG CGCG CAGG                 TACGCATGTCGAAGT  52 84
        fetA 3461208 .. 3461226 -    -3  -2.74523   GTATTGGTAATATTA             TGCTCGTT CAT AACGCGCC             TCCTGCATCTCTCCG  41 4
        fetB 3460016 .. 3460035 -  -3.6  -4.57341   AAGCGGTGTTAAAAA            CT-ATCCCG CTA CAGGATCAG            GATACCCGTTATCAG  69 429
NFH28_RS17155 NONE
NFH28_RS17150 3454789 .. 3454812 - -12.4  -3.41701   GCGACTAAAAAAGTA          CGCGCCGTTT TAAA AACCGGCGCG           AAATTATTCACATCA  90 45
NFH28_RS17145 3453466 .. 3453500 -  -2.1  -3.84451   TGGCGTAAAGGGAAA    TGCCGGATA-AGAGGT CTTA ACGCCAACATCCGGCA     GAGGAAAACGCTTTA  51 38
NFH28_RS17140 NONE
        sfbB NONE
NFH28_RS17130 3450620 .. 3450643 -   -11  -5.27923   CAACTGGAGAAAAAA          GCCGCGAATA TCGT TTTTCGCGGC           ACATGGCAAGACGTT 100 103
        allA 3447844 .. 3447858 -  -7.2  -4.12254   TATGAGCATAAACAA               TGAACA ATA TGTTCA               TCTTATGCAAGAAGG  72 50
        allR 3446960 .. 3446979 - -13.6  -3.67443   AAAATTTTAAAAAAG            TCCCGCTC CAGC GAGCGGGA             TGCGGCTCAGGCTAC 100 32
         gcl NONE
         hyi NONE
        glxR 3443321 .. 3443346 - -11.9  -3.01712   TGTTCCTTGTGAACA         GGTATCGCTGC AGCC GCAGCGATACA          CATAATTAGGACAAT  81 31
NFH28_RS17090 NONE
NFH28_RS17085 NONE
        allB 3439013 .. 3439033 - -16.9  -3.83378   CCTTAAAATAGAGAA            TGCCCGTCG TGA CGACGGGCA            TTAAATCACACCGGA 100 41
NFH28_RS17075 NONE
        glxK 3436309 .. 3436319 -  -2.4   -3.8062   TAACCTCGACAACAA                 CTGG GTG CCGG                 TGAAAAAAGGCGACT  52 227
NFH28_RS17050 3431332 .. 3431346 -    -2   -3.6682   CGCCACTGATGTAAA               CATGGG AAC CCCTTA               TTGCAAACGTTCTAA  49 23
NFH28_RS17045 NONE
NFH28_RS17040 NONE
NFH28_RS17035 3428191 .. 3428214 -    -6  -4.07568   CGTCCGGGGCGAAAA          GTCGGCCA TCTGAATC TGACCGAC           AGCGATACGTCACGT  67 168
        cysS 3423809 .. 3423838 - -15.1  -6.04324   CGAAAAAATAAAAAA       CAGGCCGTTCTAT GCAA ATAGAGCGGCCTG        TAAAAGCGCTTACTT 100 35
        fimA NONE
        fimI NONE
        fimC NONE
NFH28_RS16965 NONE
        fimH NONE
        sfmF 3413988 .. 3413998 -  -5.4  -4.67607   TGTCTAACAAAGAAA                 TTGC CGA GCAA                 CTTTTATTGAGTAAC  73 185
NFH28_RS16930 3410483 .. 3410494 -    -3   -4.1523   TTGATTACATAGAAA                TGTT TTAT AACA                 GTAGACGCCGGCATG  56 266
NFH28_RS16895 3406133 .. 3406148 -    -4  -3.46141   ACGACTATGAAAAAG              CAATGG TCAT CCATTA               ATCGATGAATAATGC  52 190
        rclA 3402684 .. 3402700 -  -9.4  -5.83822   GACAGGCAAAAAAAA              GCCCTG ATTAA CAGGGC              TATATTATTTATGTT 100 41
        rclB NONE
        rclC 3401691 .. 3401720 - -14.3  -3.13867   TCATTCATCAACACA       TTGTCGGATGGCG CAAG CGCCACCCGACGA        ATCGCGGCATAAAGA  95 55
        pheP 3398739 .. 3398770 -   -16  -2.56596   TGCGGCATTAATGGA      TTGCCCGATCGCAT GAAC ATGGGATCGGGCAA       AAAAGTTAATGAGCC 100 31
NFH28_RS16840 3395212 .. 3395228 -  -2.2  -4.25104   GGCGTGTCATCAAAA              TCGGGC GCTAA ACCCAA              CGTTATAACGGGTTT  57 3
NFH28_RS16835 3391861 .. 3391883 -    -7   -3.1706   AATGCAGTGGATCAA           CTCCGCCA GCATACA TAGCGGAG           AGTATTTCCACGGAC  56 452
NFH28_RS16785 3384869 .. 3384904 -  -2.6  -4.56597   GCGCTGGCGCAAAAA    CTGGTCGGGATC TTTCATCTTATG GATCTCAACCAG     CTTTATACTTTGTTG  65 133
         fes 3379129 .. 3379147 -    -3  -3.13475   GAATTCCATACTCAA             CTCCTGTC ATG GACATGTG             CCCGGTTAAAGCGTG  45 31
NFH28_RS16755 NONE
        entF 3374957 .. 3374983 -   -14  -5.45652   AGTTGCAATAAAAAA         CCCATAATAATT AGT AATTATTATGGG         TTTCAGGATTTAATT 100 65
   wzz(fepE) 3373605 .. 3373624 - -12.2  -3.98661   CACACTGATGACAAA            GCCGGATA TCGC TATCCGGC             TTTTCGGGTAAATCA  93 38
        entS 3369126 .. 3369139 -  -2.3  -3.54424   CCCGAGGGCTGCAAA               CCAGC AAAA GCCAG                GGTAAGCGCCACGAT  47 328
        entC NONE
        entE NONE
NFH28_RS16705 NONE
        entA NONE
        entH 3363189 .. 3363200 -  -2.2  -2.58651   CAACATGATAAAACC                GGAT TGTT ACCC                 ATTTTTTACATTACA  39 102
        cstA 3360949 .. 3360973 - -12.9  -2.78798   ACCTGTCATTCAAAT          GCCCTCTCC TTATTCT GGAGAGGGC          TATTGATGTAAAAAG  85 42
NFH28_RS16685 3360418 .. 3360430 -  -3.4  -4.81249   CCGCAAACGGAAAAA                TTCC TGCAC GGAA                CGAAAGTGGCTTATG  70 324
NFH28_RS16675 3358256 .. 3358290 - -10.1  -3.24232   TGCGCCTGAAACAGA     TCAACGGCCTGCA GGAGCTTTT TGCAGACCGTCGA     TTCTCCAGAGCGTGG  74 53
        ahpC 3353203 .. 3353220 - -12.7  -4.05788   GGTGCTGAAATGAAA             TGGGCGC GGGT GCGCCCA              TGACTGAAACAATTT 100 162
        ahpF 3351391 .. 3351411 - -14.1  -5.63517   CGTTGAAATAAAAAA            CCGTCTGTT ATT AACAGACGG            TTTCAGAGTATTGAT 100 164
NFH28_RS16640 NONE
NFH28_RS16635 3348379 .. 3348391 -  -5.5    -3.445   CTATTCACTAAAAAC                GCACG TCT CATGC                TACGGATTCCCCTTT  57 20
NFH28_RS16630 NONE
NFH28_RS16625 3347018 .. 3347050 - -13.4  -2.83903   GTGGCTAAAAACTTA      CACGCCCTGCCAGG TCACG CCTGGCAGGGCTTT      TTACTGCATCATCGT  86 40
NFH28_RS16615 3345058 .. 3345077 - -12.2  -2.87881   TAATGCGTTTACACA            GAGGATGC CTGC GCATCCTC             TTTCCGTTAGCCCTT  80 56
        dpiB NONE
        dpiA 3334026 .. 3334044 -  -2.4  -3.59979   CCCCGGCATCTTAAA            CCA-GGC TTAGCC GCCGTGG             TAAATACGCTGCGGC  49 13
        pagP 3331480 .. 3331496 -  -7.3  -4.02302   TTTACATGAAAAATA              GACACAA ATG CTGTGTC              GGATACCAGTACAAC  72 171
        cspE 3331200 .. 3331216 - -10.8  -5.81032   TAAGCGCAAAAAAAA              CCCGCC GAAAG GGCGGG              TTTTGAAATCTTGCT 100 54
NFH28_RS16535 3329818 .. 3329837 -  -5.6  -4.72272   CTTCTTCACTAAAAA            CAGGCTGCG TAA CGC-GCCGG            ATTAACCTGAGAATA  74 113
        tatE 3329544 .. 3329558 -  -9.2  -5.81412   TTCAGGCAAAAAAAA               CCGGCA ACT CGCCGG               TTTTTTTACTCTGCG 100 60
        cobD 3317319 .. 3317332 -  -8.1  -3.04461   GACGCAGGCGCAACA               CCAGC AGTG GCTGG                AACAGCATCTGACCC  60 191
NFH28_RS16445 NONE
NFH28_RS16440 3310866 .. 3310887 - -10.1  -3.54653   ATTCCCAGGAGATAA           CCGGACAGC TTGT GCTGCCCGA            TTTGGTATCAGAACG  77 33
NFH28_RS16435 3309851 .. 3309866 - -11.8  -3.14132   CTGTTGGTTTATGAA              CGGGCG AGAC CGCCCG               TCGTGATTTATTTTC  83 51
NFH28_RS16430 NONE
NFH28_RS16425 3307294 .. 3307317 - -13.2  -3.04263   ACTGCACGCTTAACA          TG-GCGGACGG CAA CCGTCCGCTCA          CGATAATGAACCTTA  86 38
NFH28_RS16415 NONE
NFH28_RS16410 NONE
NFH28_RS16405 3303335 .. 3303352 -  -3.4  -2.97436   CAGATATTCATAAAT             CGCTCA CTCCTT TAAGCG              TTTCCGGGCATGTCG  44 0
NFH28_RS16400 3301828 .. 3301842 - -12.8  -3.62275   ATTGACGAGCCGAAA               GCGCCG TAA CGGCGC               TTTCACTACCCCTGT  95 41
        ubiF 3286968 .. 3286989 -  -3.7  -3.06686   ATGCTACATAAAGTA           GTACGTTGC CAAT ACAACGTAT            GCACAATTGAAATGG  45 175
        nagE 3277077 .. 3277100 -   -11  -5.75342   TTGCGGTAAAAAAAA          GCGGC-GAAGG TTT CCCTCTGCCGC          TTATGTTTCCTGTGA 100 84
        glnS 3275222 .. 3275238 - -11.5  -5.38951   AATGCAGAGAAAAAA              CGCCGCA GAA CGCGGCG              TTGACAAGGTATTTT 100 68
        chiP 3273396 .. 3273422 - -12.2  -3.01712   GGTCGTTCCTCAACA         GCGCGGCAGGCC GGC AGCCTGCCGCAT         CTGACATCAGAAAAT  81 32
        chiQ 3273004 .. 3273030 - -13.7  -5.07107   TAAAGCCTGAAAAAA         CCACGGGCGGA AAACA TTCGCCCGTGG         GTGGCAAGGCAGGGT 100 42
        seqA NONE
         pgm 3262935 .. 3262950 - -10.4  -5.47159   CGTTAATACAAAAAA              GGAGCC GTAA GGCTCC               TTTTTCTTCCATATC 100 46
NFH28_RS16140 3249661 .. 3249675 - -11.4  -5.60993   TGGCGCATAAAAAAA               CCGCCA GCG TGGCGG               CTGACGGTTTTTCAG 100 52
        phrB 3248141 .. 3248164 - -13.9  -2.67747   TCCTGATAGCAGAAT          GCCCGGTAG TTTGCG CTACCGGGC           CTGTATCACGCCCCT  86 31
        ybgI NONE
        pxpB NONE
NFH28_RS16115 NONE
        pxpA 3242999 .. 3243021 -  -6.2  -4.19371   GAAAGGGGTAATAAA           GAGTCAGGTA GTT TACCCGCCCC           GGAGGTTTGATTAGA  70 260
NFH28_RS16105 NONE
NFH28_RS16100 3242118 .. 3242131 -  -2.4  -3.68351   TGTTGATTATGTAAA               TCAG CTTTCC CTGA                ACAGACTTCTCTGTG  49 69
NFH28_RS16095 3241676 .. 3241686 -  -6.8  -3.34222   ATCAGTACGTCAGAA                 CCTG GTA CAGG                 CTGAACAACGCTGCG  61 1
NFH28_RS16090 3240913 .. 3240927 -  -7.2  -3.68351   GCGGCATGATGTAAA               TATGCT GTC AGCATA               AATCCGGTGCGTTAC  67 18
         glf NONE
NFH28_RS16080 NONE
NFH28_RS16075 NONE
NFH28_RS16070 NONE
NFH28_RS16065 NONE
NFH28_RS16060 NONE
NFH28_RS16055 NONE
NFH28_RS16050 3230919 .. 3230938 -  -5.7  -2.60079   CCAGGGCATAATCGA            CTCAGCCC TTGTC GGGC-GAG            CGCCCAATAATGATT  50 67
NFH28_RS16045 NONE
         nei 3229869 .. 3229885 -  -2.9  -3.54543   ACCTATGCGCCCAAA              CAACCTT TGT AGGGCTG              ATAAGCGTCGCGCCA  48 75
NFH28_RS16025 3227050 .. 3227060 -  -5.4  -4.95758   ACGACACCAGAAAAA                 GCAT ATA ATGC                 GTAAAAGTTATGGGG  78 33
        sdhC 3226278 .. 3226291 -  -3.1  -2.78384   GCGTTGCTTACCATA               CG-AGG ACT CCTGCG               AGAAGTGAAAGCACG  43 4
        sdhD NONE
        sdhA NONE
        sdhB 3223084 .. 3223104 - -14.1  -2.55351   GCCGTGGATACTAAC            CACGCATAC GCT GTATGCGTG            CCGGGGTTCACTTGT  87 351
        sucA NONE
        odhB 3218817 .. 3218830 -  -6.7  -2.81464   CCATCAGGCATTACA               CCATC GCCG GATGG                CGGCGTGAACGCCTT  55 77
        sucC NONE
        sucD 3216637 .. 3216655 - -11.7  -5.33866   TAAAGCCATAAAAAA             GGCCACC GTAAA GGTGGCC             AACCATGTCGAAAAC 100 75
        cydA NONE
        cydB NONE
        cydX NONE
        ybgE 3211807 .. 3211832 -  -9.1  -4.82154   AAGGGAGAGTAAAAA         TATATGGGCTT ATGC AAGCCCCTATA          TTTTTAAGGAGGTTT  90 46
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal 3206819 .. 3206830 -  -2.2  -2.52896   TGATGTCTGAAGTTA                CTGC TCAT GCAA                 TTCTCTTAGTAAACC  39 31
        cpoB 3205989 .. 3206036 - -14.3  -3.15579   TCAACTGCTTAGGAA TCGCACGACGCGACCAGAAAA AAGGCG TTTTCTGGTCGCATGGTACGC ATTACATCGCGTTAA  95 27
NFH28_RS15925 NONE
NFH28_RS15920 NONE
NFH28_RS15915 3205460 .. 3205472 -  -4.8  -2.76189   CAACTGAGCTAACGA                CCCA TACGG TGGG                ACTACCTGAAATATT  49 65
NFH28_RS15910 3205250 .. 3205264 -  -3.5  -2.76189   CAACTGAGCTAACGA               CCCCT TGGAT AAGGG               TTACTGCTTCAATCA  43 148
NFH28_RS15905 3205152 .. 3205166 -  -8.5  -5.24989   GCAGATAGCAAAAAA               GCGCC TTTAG GGCGC               TTTTTTACATTGGTG  95 36
NFH28_RS15900 3204997 .. 3205011 -  -8.5  -5.24989   GCAGATAGCAAAAAA               GCGCC TTTAG GGCGC               TTTTTTACATTGGTG  95 36
NFH28_RS15895 3204842 .. 3204856 -  -9.2  -4.84527   TGCAGATAGCAAAAA               GGCGCC GCC AGCGCC               CTCTTTTACATTGGT  90 37
        nadA NONE
        pnuC 3202539 .. 3202555 -  -4.3  -3.06501   TACAGCGCCATTTAA              GTCGGGA AAT CCCCGAA              GTCCGCAACGTACAC  47 256
        aroG 3199911 .. 3199938 -  -9.9  -3.06315   TTAATATTGGTAATA        CCGGTCCGGTA GGCTGT TACCGGACCAA         TATGTTTTCTATCCT  71 69
NFH28_RS15855 3197302 .. 3197313 -  -5.8  -3.63627   CCTGGATACCTCAAA                GCCT TGCC AGGC                 AAGATATAGAGGCTA  60 175
NFH28_RS15845 3194961 .. 3194971 -    -4  -3.77832   TCTCAAATTTAATAA                 TCTA AAA TAGA                 AAAGTAATATCAGGC  55 42
NFH28_RS15840 NONE
        oadA NONE
NFH28_RS15830 3191503 .. 3191561 -  -9.9  -2.62396   CATTCCCGGAGACGA TGCTGCGCATCTGTCCGGGCTA-CAGATC CATGC AATCCGGTAGCCCGGACAG--GCGCAAC- GCGCCGCCTCCGGGA  68 52
NFH28_RS15825 3190591 .. 3190608 - -11.3  -3.40481   CCATAGACAAAGACA             GCGTGGA GCCA TCCACGC              TTGAGGCTGCTGACA  83 188
NFH28_RS15820 3189305 .. 3189335 -  -4.7  -2.52834   GAGCGGAGCATTAAC      CCGCG-CATCAGAG ACTC CCCCGATGTCGCAA       TACAATGCTTAAAAA  46 2
NFH28_RS15815 3188471 .. 3188516 - -18.6  -3.29511   CGGATGGCGGTATAA CTGC-CTTATCCGGCCTAC GAGCAATGG GTAGGCCGGATAAGCGCAG CGCCATCAGGCAATA 100 45
NFH28_RS15770 3179272 .. 3179289 -  -9.8   -5.1356   CTTGAGTAACAAAAA             CGCCCG ACTGAG CGGGCG              TTTGGGGAAATCAGC  93 36
        modA NONE
        modB NONE
        modC 3176391 .. 3176405 -  -6.4  -3.95456   AAAGGCAACAGTAAA               GGCAAG CGC CTTACC               CAGTGGATAGAAGCG  65 230
         pgl 3174515 .. 3174543 - -17.4  -3.87815   GTTCAGGCTTATAAA        CGGGCCGCCGCA GCAGA TGTGGCGGCCCG        TGGTTTTACTGCAAG 100 114
        hutI NONE
        hutG 3170810 .. 3170824 -  -2.1   -3.3382   CGGATGACAGATTAA              CGC-CA CCAG TGCGCG               ATTTGCCAGCCAAGC  45 7
NFH28_RS15725 3169939 .. 3169956 -  -7.1  -3.08176   TAAGAATCAGACATA             TACTTGT CTAT ACAAGTA              AGCACAAGAATAGAA  60 105
        hutU NONE
        hutH 3166573 .. 3166604 -  -8.6  -3.53444   GGATGGCGGCGTAAA      CGTCTTACCCTGCC AACG GGTTGGGTAAGCCG       AATAAGCGCCGCTCC  71 53
        bioB NONE
        bioF NONE
        bioC NONE
        bioD 3160982 .. 3161001 - -12.2  -4.13561   TCTGGCGAAAAAACA            GCAGGATC GTCT GATCCTGC             AAGAAGGCAGTTTTT  93 49
        uvrB 3158311 .. 3158335 - -10.7  -4.17089   CTGAAATTCTCAAAA          GCGAGCCATGG TAA CGATGACTCGC          TGGCGATCGACACAT  88 43
NFH28_RS15675 NONE
        slrP 3155508 .. 3155535 - -13.6  -3.40403   CTGCGCTTATCAGAA        GCCTGTTTACACC GAA GG-GTAAACAGGC        TCTCTCCCTCTTCTG 100 56
        moaA 3153166 .. 3153180 -  -2.8  -2.76492   TGACTCATCTGAAAT               CTCCTT ATT AAGGAT               TAACCGCCAATGTAA  41 25
        moaB NONE
        moaC NONE
        moaD NONE
        moaE 3151439 .. 3151458 -    -5  -3.53091   ACTCCTGTGTGGAAA            TGATACCC TAAA GCGTATCA             CATTCTGCTACCAAC  56 33
NFH28_RS15635 3150676 .. 3150694 - -10.3  -6.06529   CATAGACAAAAAAAA             TCCTGGC GCAGG GCCAGGA             TTTTAAGAGATCGCT 100 45
        tnpA 3149966 .. 3149984 -   -16  -2.80512   AGTCCTAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCAGATGCGCC 100 107
NFH28_RS15625 NONE
NFH28_RS15620 3148021 .. 3148032 -  -2.2    -5.252   TATGCTGAGAAAAAA                GACG TATT CATC                 TGTAAGCGGGAAAAA  74 510
NFH28_RS15595 3144042 .. 3144052 -  -2.4  -3.53091   ATTTTCGTTGGTAAA                 GCGG TGC CGGC                 GCTGATTGTCGCGAC  47 417
        rhlE 3136965 .. 3136978 -  -2.3     -3.54   AGTACTGTATAAACA               GCCAC TATT GTGTC                ACATTTCAGGGGCGG  47 192
        dinG 3134797 .. 3134810 -  -9.5  -3.24747   TGCTCACAGCATTAA               CGCCG TCGG CGGCG                TGCAGGTTTTGCTTT  72 8
        ybiB 3133482 .. 3133517 -    -6  -4.41844   AAAACCTGCATAAAA    TCGGCGTAGTGTCTGCC GAT GGC-GCCACCACGCTGG    ATGGCCTGGAAGCTA  73 297
        rlmF 3131181 .. 3131194 -  -2.3  -4.11692   TATTCAGTTTGAAAA               CGGGA TGAA TACCG                GCGACTTAGTCACCA  56 522
        ompX 3124006 .. 3124023 -  -9.1  -5.81412   TTCAGGCAAAAAAAA             TCCGCCC CGAA AGGCGGA              TTTTTCATTTTCACC 100 48
        mntR NONE
NFH28_RS15485 3119995 .. 3120018 -  -7.4  -4.15106   GATGAACCGGTAAAA          GCCACCA-CCG AGC CGGACGGTAGC          CGTTACATTGAGGTG  74 249
NFH28_RS15475 3117428 .. 3117460 - -15.7   -3.0263   ATTACCTTGTTAACA      TTCTGTAACCCCGAC GCT ATCGGGGTTACAGAC      AATAACTTACTCGAT  93 32
NFH28_RS15470 3116065 .. 3116085 -  -4.8  -4.07568   GGCGGTGCTGGAAAA            TAAAGTGC CGTTT ACACTTTA            ACGAGAGTCGGGGCA  63 55
NFH28_RS15455 3112806 .. 3112819 -  -8.1  -3.04144   GCGCTACGTTTAACA               GGCCT ACGC AGGCC                TGTTAATCAGAAGGG  62 32
        iaaA NONE
        gsiA 3104129 .. 3104140 -  -7.2  -3.36492   GTCTGAATGTTATAA                GCGC GAGA GCGC                 ATTATCCTGCAGCGG  63 8
        gsiB NONE
        gsiC NONE
        gsiD 3100213 .. 3100224 -  -5.8  -3.54424   CTCGACTTCCTGAAA                GAGG CGCG CCTC                 GATCGTGTAGGCTGC  57 458
        bssR 3098237 .. 3098267 -  -7.6  -2.87683   ACAGGCTGGCATATA       GGAGAGCATGAC AACCCGG GTCATTCCCTCC       GTGATTTTTTAGTAA  59 385
NFH28_RS15390 NONE
NFH28_RS15385 NONE
NFH28_RS15380 NONE
NFH28_RS15375 NONE
NFH28_RS15370 3093849 .. 3093861 -  -4.9  -4.59212   AACCAATGAAATAAA                TATCA TAG TGATA                AAACAGATGAAATGG  73 376
NFH28_RS15365 3091890 .. 3091913 -  -6.1  -4.41047   ATGGTTGAAGCAAAA          GTG-GGCATT GGTAT AATGCCTCAC          TCTGCTGCATCCCGT  73 190
        dacC 3087352 .. 3087391 - -17.2  -3.18383   ACTCTGATGTATTAA  CCGCCCGTAGCCGGATGCG ACG CGCACCCGGCTACGGA-GT  TATTTTACGAGAACC 100 30
NFH28_RS15320 3083868 .. 3083878 -  -8.2  -4.10161   GACGATGCGTTAAAA                 GCCG TTG CGGC                 AATGTATTATCATCG  77 515
NFH28_RS15305 3081125 .. 3081149 -  -2.1  -2.91276   GGTCGGCGGACAAAT         GCTGATCGCC GGGCTT GTCG-TCAGC          CTGGTACCGGTGGTG  40 379
NFH28_RS15295 3078675 .. 3078687 -  -5.5  -3.56704   GGGTTATCAAAGGAA                CAGGC GTA ACCTG                CTTTTCATCTGCCGT  57 391
NFH28_RS15285 NONE
        nfsA 3077562 .. 3077582 -  -7.5  -4.19276   TGAAAACCCTGAAAA            GCCCGCGTA TCA TACACTGGC            CCGCAGGTTTTAGCG  74 35
        rimK NONE
NFH28_RS15270 3076019 .. 3076041 -  -8.4  -3.48617   AAAAAAGTGTAAACA           GCAGCCGC GCTGGCA GCGACTGC           CTGATTATCGGAAGG  71 43
        potF NONE
        potG NONE
        potH NONE
        potI 3071521 .. 3071539 - -11.7  -3.08032   CTTCCCTGAAAATGA             TGCCGCG ACCCG CGCGGCA             ACGCATTGCCATAGT  81 58
NFH28_RS15245 NONE
        rlmC 3069761 .. 3069803 - -11.7  -3.10901   AAATAGGGTAATATA TAAATACAACCAATTGAAT TAAAT AATCAATTGATTGTATTTA TTATTTTTATGAAAT  81 74
NFH28_RS15235 NONE
NFH28_RS15230 NONE
NFH28_RS15225 3066299 .. 3066316 -  -9.1  -3.58343   GTCATCAGTCTCAAA             CGCCTGC ATCA ACAGGCG              ATTCGGACTAATACT  75 88
NFH28_RS15190 3061122 .. 3061137 -  -3.2  -2.65264   CCACCAGCCACAGTA              GCGC TTTCATCG GCGC               GTTTTCACCGCCGTT  42 16
NFH28_RS15185 3060255 .. 3060286 -  -6.4  -2.56596   CGCTGGACGAAGGCA      TTGAGCGCACCGCC GCCT GGCTGCGCGATCAC       GGAAATTTACCGCGT  53 40
NFH28_RS15145 3049229 .. 3049248 -  -4.2  -5.14965   ATCGCCAGTAAAAAA            CGG-GCCGA GTA TCGCCGCCG            CTATGCATTACTCGA  85 77
        macA NONE
        macB 3045053 .. 3045073 - -12.6  -4.21462   ATCCAGGAGGCAAAA            TGCCAGCC CGATC GGCTGGCA            TTTTTATTTAACGCC 100 98
NFH28_RS15120 NONE
        clpS NONE
        clpA 3041803 .. 3041820 -  -9.8  -5.76633   CCATAGACAAAAAAA             CCGGGC GCTAAG GCCCGG              TTTGTACGACAGTGA 100 49
        tnpA 3041093 .. 3041113 - -12.5  -3.81557   CGGCGTAAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCAGATGCGCCT 100 106
NFH28_RS15080 3036508 .. 3036524 -  -7.9  -4.36914   GGCGGCTGGATAAAA              GGTCGGT TTA ACCGGCC              TTTTTTGCGTCCATT  79 63
         lrp 3029496 .. 3029525 - -16.5  -2.75577   CGATGCTAAAACGGA       CAACAGCACCGGG TTGC CCCGGCACTGTTG        CTGTATGGATTAACA 100 82
        ftsK 3025402 .. 3025416 -  -3.4  -4.18494   CAGGTTTACTCAAAA               GGCGGC GGA GCCAGC               ACTTCACGATTACCG  60 1
        lolA 3024610 .. 3024631 -  -2.3  -3.55254   TATTATCAGAAAAAT           CGAGCGA-CA GAT TGCTCACTCA           TCGCCTCTACTTACG  47 32
        rarA 3023100 .. 3023116 -  -9.5  -3.18582   GATTGTATTGATGAA              CGTAAAC CGC GTTTACG              TAATAGCGACGTTTT  72 194
        serS 3021695 .. 3021708 -  -9.5  -5.61596   ACTGGCATAAAAAAA               GCGCC CGAA GGCGC                TTTTTAGAAGAGGAG 100 51
        dmsA NONE
        dmsB NONE
NFH28_RS15010 3017513 .. 3017551 - -17.5  -3.53811   TTGATGGCGGCTAAA   GGCGAATTCGGCCTGCA CGTTC TGCAGGCCGAATGCGCG   TCAACGCGTTAACTG 100 34
NFH28_RS15005 3016022 .. 3016047 - -12.7  -3.95749   AAACATAAACAAAGA         GTATGCAAGAC TCAC GTCCTGCATAC          GATTCAGAGAACAGT 100 40
NFH28_RS15000 3014158 .. 3014179 - -11.6  -3.53444   TTACCCGCTTTTAAA           CGGCTACC CATGAC GGTAGCCG            TTTTGCTGTCTGGAT  85 269
       sopD2 3011764 .. 3011783 -  -4.9  -5.28826   AAAGCGTACAAAAAA            GGCTCCA TATCAG TGGGGCC             TTTTTAATGACTTTT  82 40
NFH28_RS14965 3005393 .. 3005412 -    -5  -3.70863   CAGACATCAGGCAAA            CGTTATTC ATGT GAATATCG             GTTTTATCATTCAGT  57 142
        serC 3004217 .. 3004237 - -10.4  -5.48623   AAACAGAAATAAAAA            CCCCACAG ACTGG CCGTGGGG            ATGAAAAAAGAAACG 100 43
        aroA 3002791 .. 3002806 -  -3.3  -5.33785   AACTATTATAAAAAA              CACAT AAATCA ATGTG               TTAAATCATCAACAA  81 120
NFH28_RS14950 3001861 .. 3001881 -  -5.3  -3.75629   TACCGTTAACGTAAA            CGCCGCGCA TTA TACGCGCCA            ACGCTCGCGACCGTT  59 141
         cmk 3001094 .. 3001118 -  -7.2  -3.06696   GGGTTGTTTAACATA         CCCGCTGTCAA TCCT TTG-CAACGGG          GGTACTACAAATTCG  60 48
        rpsA 2999251 .. 2999268 - -14.1  -3.20382   CGTGAGATTGATTAA             GGGCGGC CGTA GCCGCCC              TTAGTGCTTGATTAC  95 111
        ihfB 2998869 .. 2998883 -  -7.1  -5.42514   GTATAAATGAAAAAA               GCACC CTGAC GGTGC               TTTTTTCGGGTTCAA  95 56
NFH28_RS14930 NONE
        msbA NONE
        lpxK 2993606 .. 2993645 -  -3.1  -2.78414   GGAAAGAGAAAGGTA CGGCAATGAC--ATTCATG ACTC CATAAATTCATCACTGCCG  CTGCATTGGGGGACG  43 41
NFH28_RS14915 NONE
        ycaR NONE
        kdsB 2991298 .. 2991311 -  -5.3  -4.45077   GAAAAATGAGGAAAA               TCGTA ACGG TACGA                GAAAGCCGCCACTGA  71 122
NFH28_RS14900 2990052 .. 2990084 -  -5.4  -3.98378   GATACGGAAGAAGAA      GCCGCCGCCGTTAA GCAGG CCATCGGCGACGCC      CCTTTCCTGTTGGTA  63 245
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 2982016 .. 2982031 - -11.8  -5.42975   TCAGATAAAGAAAAA              GGCGGC TTTC GCCGCC               CCAGGCTAATGATAA 100 137
        ldtD 2979887 .. 2979911 -  -4.3  -3.35679   CTCCCCCAGCCACAA         CGGGG-GTCT ACAGCG AAACGCCCCG          TTGAAGCCAAACATT  52 71
NFH28_RS14865 NONE
NFH28_RS14860 2978444 .. 2978460 - -12.3  -5.28176   GTGACCGATAAAAAA              GCCTGCA ATG TGCAGGC              TTTTTCATTCTGCTT 100 39
        dpaL 2971699 .. 2971712 -  -2.4  -3.74397   ATGCGTATAAAAAAC               GCAT TTTTAC ATGC                TACCTTTATTATCTA  51 59
NFH28_RS14830 2969744 .. 2969763 -  -3.4  -3.55444   CCTTGATCTGCCAAA            GGCGGTCG AGCT CTATCGCC             ATTTCGCCTCTCGCG  49 327
NFH28_RS14775 NONE
NFH28_RS14770 2960235 .. 2960259 -  -6.4  -3.96148   TTTTTGCACCAGAAA         GCCGTTGGTGA CCCC TCACCG-CGGC          TTTCGCCTTTTTGGT  66 52
NFH28_RS14765 NONE
NFH28_RS14760 NONE
NFH28_RS14755 NONE
NFH28_RS14750 NONE
NFH28_RS14745 NONE
NFH28_RS14740 NONE
NFH28_RS14735 2956248 .. 2956265 -  -4.2  -4.00234   GAAGGAATATAATAA             TCAATC AAGCTG GATTGA              TAGAATTATCATCTA  60 199
NFH28_RS14720 NONE
NFH28_RS14715 NONE
NFH28_RS14710 NONE
NFH28_RS14705 NONE
NFH28_RS14700 NONE
NFH28_RS14695 NONE
NFH28_RS14690 2951226 .. 2951245 - -12.1  -4.84918   GGCACAAACAGAAAA            GCCCCGC ACGATG GCGGGGC             TTGAATTTGTTTGGT 100 93
NFH28_RS14685 2950611 .. 2950627 -  -2.9  -3.71873   CCAGTCACAGGGAAA              CTGCACC CAA AGTGAAG              ATAGCCAGCTCAACG  51 391
NFH28_RS14670 NONE
NFH28_RS14665 2948332 .. 2948345 -  -4.5   -3.3071   ACATCATGACAGGAA               CAGAG CACG CTCCG                CCTCACGCCGACGGG  52 0
NFH28_RS14660 2947427 .. 2947438 -  -4.4  -3.21778   GTACGACACGAAAAC                CCAT AAAA ATGG                 CAAAATCACAGCCTG  50 443
NFH28_RS14655 2946406 .. 2946417 -  -3.6  -3.49777   GCCGAGACACCAGAA                CCCG ACAC CGGA                 AGAGAAGCGTTTCAG  50 450
NFH28_RS14640 2945361 .. 2945388 -  -5.8  -2.77994   TAGAAAGTTCAATCA        TATTTATCGATCG TTT CGATCAA-AAATA        CTAAGAAATAACCTG  50 26
NFH28_RS14635 2944722 .. 2944739 -  -8.4  -5.28176   TTTACCCATAAAAAA             GCCCTC TCACTG GAGGGC              ATTAAATCTGTATCG  95 78
NFH28_RS14625 NONE
NFH28_RS14620 NONE
NFH28_RS14615 2941962 .. 2941976 -  -8.5  -5.05116   CCATAAATAACAAAA               CCGCC GTAAT GGCGG               TCATGTGTATCAGCT  91 57
NFH28_RS14605 2938571 .. 2938588 -  -6.9  -3.05849   CTCATTAAACGAAAG             GGACCGG AAAT CCGGTCA              GTTTGTGAAGTTGCT  58 23
NFH28_RS14600 2938269 .. 2938286 - -10.5  -5.24129   TGCCTCCATAAAAAA             GCCCGCC CGCA GGCAGGC              TTCAGATTCATTCAC 100 44
NFH28_RS14595 NONE
NFH28_RS14590 2935204 .. 2935214 -  -6.8  -2.55668   CACCTTCACAGCAAT                 CAGG TGG CCTG                 CATTACCACAGTAAC  55 43
        pepN 2927918 .. 2927946 - -13.2  -5.40072   CGTCCGGCAAAAAAA       TGCCCGGC-AGCG CTAA CGCTTACCGGGCA        TGTCTTACCTCTTTA 100 53
        pyrD 2926708 .. 2926737 -  -5.7  -4.84918   TGGAGAAATATAAAA       CAACCAGCGCC GGAAATAA AGCCCTGGTTG        TCTGATAAAGGGTAA  76 44
        zapC 2925797 .. 2925812 -  -6.8  -4.05033   GTTACGCCAGAGAAA              CACCCG GACG CGAGTG               TAACCATCGACTGGC  68 261
       rlmKL NONE
NFH28_RS14520 NONE
        pqiA NONE
        pqiB NONE
        pqiC 2917293 .. 2917319 - -12.3  -6.20267   TCAAAAATAAAAAAA         CCGCCTCAGGC GCACG ACCTGAAGCGG         TTAAATTTACATTAC 100 48
         rmf 2916879 .. 2916895 - -13.7  -3.74347   CCCATAAAGGCGAAA              CCTCCGC ACT GCGGAGG              TTTCTTTTTCTAAAG 100 49
        matP 2913782 .. 2913796 - -12.8  -5.24129   CCGTCTGATAAAAAA               CCCCGC GTC GCGGGG               TTTTTTGCTCTGGTC 100 63
NFH28_RS14470 2910853 .. 2910873 -  -7.5  -3.37959   CAACCTGAAGACGAA            CAGCGCGTA CAC CAGGCGCTG            GAGGGTTTAAAGCAG  61 174
        helD 2906205 .. 2906241 -    -2  -4.41616   AGCGCCTGAAATAAA    CGCTACGCGGGCGGGA TGCTG TACCGCCCGCGCTTTA    GGGCTTCCTCGCCAC  59 23
NFH28_RS14440 2904369 .. 2904390 - -10.1   -4.1899   TGATTGTATTTAAAA           GGCCGGAAA GCGA TATCCGGCC            ATTTAAACTTTTATT  85 36
NFH28_RS14425 2901977 .. 2901989 -  -3.4  -3.04144   TCCTGATGTCGAATA                TGCA TCTCC TGCA                CCGTGCCGTCCTCTG  45 43
NFH28_RS14420 NONE
        yccX 2900831 .. 2900844 -  -4.5  -3.51232   GGCCCGGCAAAGCAA               GCGAC CAAA ATCGC                CGGTCTGCCCAAGCC  52 53
NFH28_RS14400 2899282 .. 2899310 - -10.4  -5.41143   TAGCGCCTAAAAAAA       CAAAGGGGCTACC TTTC GGTAACCCC-TTG        TTTAATCTGGCGGAA 100 33
NFH28_RS14385 2896704 .. 2896732 - -11.7  -2.71731   TTTACGTCTGAACTA        CACCAGCGCCG TCACTAT CGGCGCTGACG        CAGACAATACTGCTT  72 157
NFH28_RS14370 2893884 .. 2893894 -  -2.4  -3.93038   CATTTGAACAGCAAA                 CAGC TAA GCAG                 CAGTATAAGATGGAG  54 440
        hiuH 2889839 .. 2889854 -  -3.2  -4.43911   AAATGGCAAGTAAAA              TAACCC TAAT GGGATA               GGCTCTAAATTAGCT  62 35
        hpaG NONE
        hpaE 2883759 .. 2883776 -  -2.7  -3.83026   CTTGCCCATATCAAA             CT-CCCCA TTT TGGGATAG             GATGGTCGCCCATTG  52 3
        hpaD NONE
NFH28_RS14310 NONE
        hpaH NONE
        hpaI NONE
        hpaX NONE
        hpaA NONE
NFH28_RS14285 2877411 .. 2877433 - -17.8  -3.68359   TCGCCAAAAGCATAA           CGGGCTGACA TCA TGTCAGCCCG           TGGGTTTATCCCTGC 100 49
NFH28_RS14265 NONE
NFH28_RS14260 NONE
NFH28_RS14255 NONE
NFH28_RS14250 2871129 .. 2871162 -  -4.3  -3.83026   TTTTCTTACAGTAAA     CGCGTTAGCGCCGGG AAAC CCCGGCGCATATTCA      GAACGTTTTTGCCCA  58 23
         agp 2869755 .. 2869784 - -15.7  -3.34591   TAAAAACGTATAACA       CAAACGCCCCCGC CTGC GCGGGGGCATATG        GCTATTTTGCAGCAG 100 27
NFH28_RS14230 2868279 .. 2868296 - -14.1  -6.02919   TTATAAACAAAAAAA             CCGCCGG AAAT CCGGCGG              CGGTGGCGCATGACA 100 85
        rutR 2867085 .. 2867107 -  -9.8  -3.59979   TTCGCTGAGCGTAAA           CACTGCCGCC GCT GGCGGTAATG           CCAGCCTGATGACAA  77 499
        putP 2861204 .. 2861231 - -12.8  -3.63744   CCGCCTGGTAAAATA        TGTCCGATGGCA ATAA TGCTATCGGACA         TGTCGGTTATTCCGC  95 32
        phoH 2859518 .. 2859541 - -14.6  -3.58905   ATGCTTTATAGATAA          CAAAGCCCGG TTTC CCGGGCTCTG           AAAGTCAATGCTATA 100 41
NFH28_RS14185 NONE
NFH28_RS14180 2853329 .. 2853347 -  -4.6  -3.28416   GATTATCGATATGAA             TACTAAGC AAA GATTAGTA             CAGTAACTCTTTAAC  52 46
NFH28_RS14175 NONE
NFH28_RS14170 2850450 .. 2850462 -  -9.1  -3.28791   ACCGGGGTTCGACAA                CTGGC GCA GCCAG                TTGGACAGACGACGA  65 251
        ghrA 2848884 .. 2848899 - -11.8  -3.64703   CGTTTTTTAGCGAAA              CCCGGC CCGC GCCGGG               TTGATATCAATATCC  89 32
NFH28_RS14145 NONE
NFH28_RS14140 2847465 .. 2847503 -  -2.6  -3.07622   ACACATTTTATGCAA  TGATGTAAAAC-CCGTT GCAGTT AATGGTGATTTACATCA   CATTATTCTTCATCT  43 28
NFH28_RS14135 2846898 .. 2846918 -   -14  -4.07455   GATGAATACGACAAA            GCGTGGGG AAGAA CCCCACGC            TTTTTTATTTTGTGA 100 30
        csgB 2843273 .. 2843287 -  -3.6  -4.11216   CTGCCACTTTTAAAA               GTTTCA TGG TAAAAC               CCCCATCGGATTGAT  57 59
        csgA 2842783 .. 2842798 - -10.4  -5.75342   CCTCCCGAAAAAAAA              CAGGGC TTAT GCCCTG               TTTTTTTATTAGCGC 100 51
        csgC 2842436 .. 2842446 -  -3.2  -4.77036   CGCCACCATCAAAAA                 CTAC TGT GCAG                 AAGGCGGCCATTGTT  69 15
NFH28_RS14095 2841979 .. 2841991 -  -3.3  -2.82015   TTTATATCTATGACA                CCGCC GTT AACGG                TACTCAATATTCATC  43 19
        ymdB NONE
NFH28_RS14085 2839892 .. 2839904 -  -3.3   -4.0896   AAACCGCCGGTAAAA                CGAGA AAG TCGCG                CCACGATCGGGTAGT  57 56
        mdoG NONE
        mdoH 2834373 .. 2834391 -   -11  -4.91511   ATTTCACTATAAAAA             TACCGGCA TCA CGCCGGTA             TTTTTCACCTCACTC 100 55
NFH28_RS14065 2834085 .. 2834097 -  -6.2  -2.52015   TTGATACCGAGGAAG                GCCG TACTG CGGC                AGACGAATGGGATGA  53 48
NFH28_RS14045 2830063 .. 2830096 - -22.6  -3.53761   TAACGCCTGGCGAAA     TGCCGGATAGCGGC CTTTAC GCCGCTATCCGGCA      AAATATTACTCAGCC 100 31
        rimJ NONE
NFH28_RS13985 2821139 .. 2821152 -  -2.3  -2.62515   AATGTTCTCACATTA               CTCTC CCAG GTGAG                CTAACAAAGAATCCA  39 9
NFH28_RS13980 2819970 .. 2819980 -  -3.2  -2.59881   CATCGACCGGATAAC                 GCAA CTT CTGC                 CGTATCCGGCTGTAT  42 256
        murJ 2818121 .. 2818133 -  -3.3   -5.1101   CGATTACCGAAAAAA                CGCAG CAT CTTCG                CGACCTCAACCAGCA  76 264
        flgB NONE
        flgC NONE
        flgD NONE
        flgE NONE
NFH28_RS13935 NONE
        flgG 2812284 .. 2812315 - -11.4  -3.09004   TCATCTTCAAAATCA      GGGAGCCGGTGGCG TATC CCCCACCGGCGGCC       CCTTAGAGTTGCGTC  79 28
        flgH NONE
NFH28_RS13920 NONE
        flgJ NONE
        flgK NONE
        flgL 2806740 .. 2806768 - -14.6  -5.55664   TGACGACTAAAAAAA        TGCCCGCGCC GGGGTGGAT GGCGCGGGCA        GACAAAACATATCCA 100 69
        rluC 2801787 .. 2801813 -  -7.2  -2.81535   TTATGAGAAAAGTGA         GATTCGGGCAGA TAA CCTGCCCGAAAG         AGGAACTATTTTGCG  58 31
NFH28_RS13890 2800810 .. 2800834 -  -6.5  -2.76815   ATTCTCGCGAACAAC          TCTCAGGAC GTTTACT GTCCTGAAA          CCTTCCCTTTGCGAC  53 111
NFH28_RS13885 2800420 .. 2800438 -    -3  -4.29106   CGCTACAGCAATAAA             CGGCCTAC TCT GTAGGCTT             TTCAAATACCGCTAA  58 77
        yceD NONE
        rpmF 2798849 .. 2798860 -  -5.8  -2.62184   TCGGCTTTTACACCA                CAGG CACG CCTG                 TGATGCAAAAGGCAT  50 55
        plsX NONE
        fabH 2796658 .. 2796668 -  -2.4  -2.92669   ACTAGAAACGAATCA                 GCGC GGA GCCC                 CAGGTGAATCCACCC  41 1
        fabD NONE
        fabG 2794819 .. 2794832 -  -2.3  -4.25848   AATTTCCTATCAAAA               CTCGC TTTC GCGAT                GGTTTTCGTAGTGTA  57 145
        acpP 2794525 .. 2794551 - -13.1  -5.02287   GACAAAAAGATAAAA        CT-CAGGCGGTC GAAC GACCGCCTGGAG         ATGTTCACTTACGCC 100 34
        fabF 2793187 .. 2793203 -  -7.2  -5.24531   ATGCCTGATAAAAAA              GGCCCG ACAAG CGGACC              TTTTTATTAATGTCT  91 55
        pabC NONE
        yceG NONE
         tmk NONE
        holB NONE
NFH28_RS13815 2788815 .. 2788833 -  -8.2  -2.77899   TTTGTTTATTAATTA             CGAGCTTT AAA AAAACTCG             TTTAACGGATTGATG  60 27
        ptsG 2787063 .. 2787080 - -12.7  -5.14965   AGCGCCATTAAAAAA             GGCAGCC GAAT GGCTGCC              TTAATTCTCCCCAAC 100 52
        hinT NONE
NFH28_RS13795 NONE
        lpoB NONE
        thiK NONE
        nagZ NONE
        ycfP 2780656 .. 2780671 - -10.4  -5.67063   TTGAGCATAAAAAAA              CCAGCC GCAA GGCTGG               TTATCCGGTCACTGA 100 64
         ndh 2779112 .. 2779143 - -13.8  -3.36878   GCGAGTGATGGAGAA      GCG-CTCACCGGC GCGAGCA GCCGGTGAGACGC      AGAGAAATTAATGCA 100 33
NFH28_RS13765 2778384 .. 2778410 - -10.1  -5.93809   TTCGGATAAAAAAAA         GCCCCTCAGCC TGAGC GAATGAGGGGC         TAACTTGCAGAGTAC 100 48
        bhsA 2777153 .. 2777174 - -15.9  -5.28176   CTGACCGACAAAAAA           GCCTCGCGA TGCA TCGCGAGGC            TTTTTCTTTTTATTG 100 75
        lolC NONE
        lolD 2770320 .. 2770343 -  -3.2  -3.83675   CAAGCCAATTAACAA          TGA-TAAAGGC GAC GCCATTACTCA          GCCCCCATCAGGCTC  53 19
        lolE NONE
        nagK NONE
        cobB 2767168 .. 2767187 -  -3.4  -4.11394   AGGCGAGTGGCAAAA            CGATGTCG GCGA CGCCAGCG             CCATTTATGAAGAGT  58 151
        pepT 2760251 .. 2760263 -  -3.3  -2.64218   ACGCTTCACCACAAT                GCGTA ACA TTCGC                TACTGCCCGCGCTTA  42 25
NFH28_RS13685 2758892 .. 2758920 -  -8.8  -2.71074   GAAGGATAAGAACAT       CGCAATGCCCGGC GACC GCCGGGC-TGACG        CAAACTATCCACAAC  64 30
         icd 2749224 .. 2749254 - -12.7  -3.82084   TTCGAATACTAATAA       TAAAAACGGGGAC GTTAA GTCCCCGTTTTTG       TTTTTAACAATTATC 100 45
        sopF 2747626 .. 2747636 -  -6.8  -4.91194   ATAATAAATATAAAA                 GCAG TTA CTGC                 CTACCTCAAGAAGTA  82 91
        pagC NONE
NFH28_RS13595 2741544 .. 2741556 -  -3.4  -4.20932   AATACTTATTCAAAA                CTGA AGTGG TCAG                TGGGAGTCGAACCCA  60 88
NFH28_RS13585 2739434 .. 2739450 -  -6.5  -3.38361   AAAGTTCAACATCAA              GGCAAGC ATT GCTTGTC              CACTGACTACATAGG  59 120
NFH28_RS13580 2738888 .. 2738919 -   -16  -2.87211   ACTTTTCGCTACAGA      CAATGAAGGCCCGT CTAA ACGGGCCTCCATTA       ACGCGATTATGATTT 100 32
NFH28_RS13575 2737131 .. 2737141 -  -2.4  -3.76586   TCTTAAACACAAATA                 CCCG GAT CCGG                 TCATTACGCCTCCCC  50 428
NFH28_RS13560 2734137 .. 2734154 -  -2.7  -2.62111   GCCGCAAAAAATGAC             TGAAGAA CAAT TTCATCA              CCGACAGGTCCAGGT  40 23
NFH28_RS13555 2733183 .. 2733198 -  -5.4  -2.82516   CGGGGCAGGATTATA              GAGCAT CGGG ACGCTC               CAGCGATCGATTAAG  50 5
NFH28_RS13550 NONE
NFH28_RS13545 NONE
NFH28_RS13540 2730937 .. 2730958 - -15.9  -3.21276   TCTCTGCCGACAATA           CCGGGAACC CATG GGTTCCCGG            TGCGTTAACGGCGAC 100 68
NFH28_RS13530 NONE
NFH28_RS13525 2729141 .. 2729159 -  -4.4  -4.20368   TTATTTCAACAGAAA             CTCAGCGG CCA CCGCGCAG             GTGGCCTTTTTTGAT  64 47
        zinT 2728382 .. 2728401 - -12.2  -5.63504   AACGGCAGAAAAAAA            GCTCGCTA TTCA TAGCGAGC             TTTTAACATTGCAAT 100 46
        aadA 2727439 .. 2727461 -  -2.8  -3.21395   ATGGCCCGCATAAGA          TCATCTGCT TACTTC AGC-GATGA           GAACCTATTAAGTAG  45 89
NFH28_RS13510 NONE
NFH28_RS13505 2725823 .. 2725848 - -11.1  -4.07455   TATGAAGAGTATAAA         CAAGGGAGGGG TTTA CTCCTCCCCTG          TTCGTTAATAATGCA  86 47
NFH28_RS13490 2724515 .. 2724529 -  -3.4  -3.06183   CTCATGTGGAGTTAA               CGCGCG CGT CGCACC               AAAGATAAGGCTGCC  45 7
        leuE 2723647 .. 2723668 - -13.7  -2.60725   CGAAAGGAGAGCAAT           GACCCGCCG TTGA CGACGGGTC            CAGGTGGTTAAGACT  86 33
        yeaR NONE
NFH28_RS13475 2722879 .. 2722907 - -13.9  -4.74706   TTCAATACGCAAAAA        CCGCATCACGC TGGCGAC GCGCGATGCGG        CTTCTGATTTAAAAA 100 74
NFH28_RS13470 2721915 .. 2721935 -  -5.5  -3.27298   GGTTGCAATCATTAA            TGATAACGA TTA TCTTTATCA            ATACCGAGTGGTTGA  54 175
NFH28_RS13465 2721476 .. 2721500 - -11.6  -3.63694   ATTCATTTTGAATAA          TAAAGGCTAC CTGTC GTAGCCTTTA          TTATCTCTGAAAGTT  87 47
NFH28_RS13455 2720772 .. 2720790 -    -6  -2.57581   TTAACTGAAACATAT             TTTCTTGC GCC GCATGAAA             CTCATTATCAGATTG  53 73
NFH28_RS13450 2720092 .. 2720107 -  -3.2   -4.4009   CGCTATCCGACAAAA              GTACCG TAAG CGACAC               CATCACAGGAGGGAA  62 376
NFH28_RS13435 2717824 .. 2717856 -   -12  -3.60296   TACGCTGATGGGAAA     CCAACC-GCAGCTCG TCGC CGGGCTGCTGGTCGG      TACGGTACTTGGCGT  81 96
NFH28_RS13425 2716682 .. 2716701 -  -3.5   -3.1634   GCCGAAATGACTGAA            GTCGCGA AGGGTG TCGCTAC             ACACCAACGTTTAGT  47 512
NFH28_RS13410 2714493 .. 2714526 - -17.7  -2.85508   CAAAGTGCATAACCA     TAAATCAGCCCGTAA TGAG TCACGGGCTGATTTA      TCACTAACAAGGCAA 100 138
NFH28_RS13395 2709920 .. 2709944 - -12.9  -2.69151   GCGTTTCAGACAGCA          CAAAGCCCGCA TAA CGCAGGCTTTG          TCGTGGTTTTTCCGG  84 54
NFH28_RS13390 2708427 .. 2708439 -  -3.3  -3.41798   CGGTAAAACAATACA                GGACT CTT AGACC                CTACGGTAATGTCCG  48 73
NFH28_RS13385 2707473 .. 2707519 -  -8.8   -2.7752   TATAGGATCTGAAAG GCGTCAGC--CGCCATCAGGCA TGACC TGCCGGATGGCGGCGCTTACAC ATTTTATCCGGCGTC  64 39
        msrB NONE
NFH28_RS13365 2704110 .. 2704123 -  -9.5  -3.91084   GCATTGGCAATGAAA               CCGCC GGAT GGCGG                CTACCTCTTATCCGG  81 47
NFH28_RS13345 2699360 .. 2699404 -  -3.6  -2.71731   CTGATGTGGTAAGTA TCACTGTCTGAATTACCGCGC CTTT GCTCAG-AATCCAGACAGTTT TATCCCTCAGCGTCA  43 38
        selD NONE
        topB 2696039 .. 2696056 -  -9.8  -3.53012   TTTGCGCCGGGTAAA             GCCGCC AACGCG GGCGGC              GTGGCGACATCGGGG  71 271
NFH28_RS13325 2694365 .. 2694386 -  -4.3  -3.03124   GTGTACGCCGGAAGA           GGCGCTGGAG TAC CCCCT-CGCC           CCGGCGGATATTCCG  47 54
NFH28_RS13310 NONE
        astA NONE
        astD NONE
        astB NONE
        astE 2686650 .. 2686680 -  -7.6  -2.90496   CTGTGTCCCAAATCA       TCCCTGTAATCCTA ACG TGAGCTTACAGGGA       CATTTATCAGGGCAG  59 32
         spy 2685798 .. 2685846 - -11.7   -5.0065   CAGTCATAAAGAAAA CCGCCGATCCTGTCCACCTCA ACGATTG TGTTGTCGACAAGACCGGCGG TCTTAAATTATGCGG 100 45
        osmE 2683355 .. 2683370 -  -7.5  -5.64274   GCAGGCACAAAAAAA              CCGGC TCGCAG GCCGG               TTTCCTTGAATGTTC 100 57
        chbB 2682718 .. 2682736 - -11.8  -3.38603   AAATACCCTTAAATA             CCGCAATA AAA TATTGCGG             TTAGTGTATGAAATA  85 70
        chbC NONE
        chbA NONE
        chbR 2680024 .. 2680045 -  -2.2  -4.15044   CCCGCTCGTAAGAAA           TAGCGTGA CGTTCC CCGCGCTA            TTGGGGCAAGCGTGA  55 69
NFH28_RS13245 NONE
        chbG 2677806 .. 2677827 - -15.9  -5.34055   ATAAACAGCAAAAAA           TGCGGCGCA TTCT TGCGCCGCA            AACTCAGGAGCTAAA 100 36
        cedA 2674902 .. 2674922 -  -9.7  -4.72272   GTCTGTCACTAAAAA            CGCCGGT CTCCAGT ACCGGCG            TTTTGTTTTTTCTTA  91 38
NFH28_RS13210 NONE
NFH28_RS13190 2667809 .. 2667831 - -17.8  -3.69395   GTCACCACGGAATAA           CCGGGTTACG TAA CGTAACCCGG           TACAATATTACATCT 100 33
NFH28_RS13180 NONE
NFH28_RS13175 2665468 .. 2665480 -  -6.3  -3.83998   TCACTCTATAGCAAA                TCAAG ACC CTTGA                CAGGGTTTCTCCGTT  64 68
NFH28_RS13170 2664826 .. 2664846 - -12.5  -2.76588   ACAATAAATAAGTTA            TACGGCGGC AAT GCCGCCGTT            TTATTTGGCTCTGAA  82 323
        thrS NONE
        infC 2660189 .. 2660214 - -14.1  -3.11325   CATAGGCGAACAAAG         CCTGTGAAGCC CGAA GGCTTCACAGA          ATTGTTACTTGAAGG  89 43
        rpmI 2659921 .. 2659935 -  -2.9  -4.87291   TATTCTAATTAAAAA               GTTAA AAACG TTAAC               GGCTTATGCGTACGG  68 29
        rplT 2659500 .. 2659522 -   -12  -4.99568   GAACAGTAAATAAAA           GAGAGGGAGC CAG GCTCCCTCTT           TTCACTGGCTTATGC 100 35
        pheM 2659302 .. 2659317 - -10.4  -5.76633   TCAGATACAAAAAAA              GCCTCC ATCA GGAGGC               TTTTTTGCGCTGTTT 100 50
        pheS NONE
        pheT NONE
        ihfA 2655405 .. 2655419 - -12.8  -5.64421   ACTTGAAAGAAAAAA               GGCCGC AAT GCGGCC               TTTTTAGTTATACGG 100 146
        btuC NONE
NFH28_RS13115 NONE
        btuD NONE
NFH28_RS13105 2652352 .. 2652366 -  -4.3  -2.71744   TATCATTATATATGA               TGACA ACAGA TGTCA               TAAGTTCAACCGGCG  47 83
        ydiV 2651325 .. 2651348 -  -3.1   -4.2679   CAACGGGCAGTAAAA          GACAGG-GTC ATAGG GCCTCCTGTC          TTCAGTGTAGACGGT  60 74
        selO 2649856 .. 2649868 -  -5.5  -3.91084   CTACTGTTAACCAAA                TAGCG CTC CGCCA                GCAGACGATGCTGCT  63 50
        ppsA 2644720 .. 2644755 - -15.4  -3.86524   ACACTGCGGTATAAA    TTGCCGGATGGCGACG TTAA CGCCGCCATCCGGTAT     TACACTACTTCTTCA 100 30
NFH28_RS13045 2637788 .. 2637798 -  -6.8  -3.14564   GGAGCGTTTGATTAA                 TGCG GCG CGCA                 GTACAGGTTTCGCCG  54 508
NFH28_RS12995 NONE
        menI 2624866 .. 2624895 -  -2.8  -2.74144   CGCTTATGTGTAAAC       GTGCACAGTATA TCACCT TTTTCTGCGCAC        ATTTTGACCAAAAGC  41 71
NFH28_RS12985 2624393 .. 2624423 - -12.7  -5.45802   CCCGGAAAAGAAAAA       CCCTTAAGTCTGT TCAAT ACAGGCTTAAGGG       TTCCGGCCCCATCCG 100 256
        sufA NONE
        sufB NONE
        sufC NONE
        sufD NONE
        sufS NONE
        sufE 2616996 .. 2617020 - -13.7  -3.60952   GAATAACAAAATACA          CGCTCTATCCA CTC TGGATAAAGCG          ACGTCGCCGTCCGAC 100 79
NFH28_RS12945 2615871 .. 2615889 - -14.6  -4.74285   ACGCACAATATAAAA             TGGCGCAC ATC GTGCGCCA             TTTTTTTGTCCGTCG 100 54
        ttrS NONE
        ttrR 2601150 .. 2601165 -  -4.8  -4.93877   CTCTATTAAACAAAA              TTTGAT GCAA ATCAAA               GAAATAACGCGGTTT  77 46
        fumD 2600547 .. 2600558 -  -4.4  -3.39216   GCTTCACGTAAAAAT                CACA CCAA TGTG                 CTGATGCATATCCAG  51 343
        spiC NONE
        spiA NONE
        ssaD NONE
        ssaE 2591520 .. 2591532 -  -5.5  -3.53444   CTATCCGTGTCCAAA                CTGGC TGC GCCAA                TTAACGCCTGGTGGG  57 64
        sseA NONE
        sseB NONE
        sscA NONE
        sseC NONE
        sseD NONE
        sseE NONE
        sscB 2586921 .. 2586934 -  -3.9  -3.05384   TTGCCGCTGACGGAA               TATGA ATTT TCATA                TTTCGTTCTGTTATT  47 40
        sseF NONE
        sseG 2585443 .. 2585458 -  -3.2  -3.32516   AGAAAGCAATGAACA              TCCGGT ATAT ACCTGA               AAACGATTACTCCGG  48 32
        ssaG NONE
NFH28_RS12785 NONE
        ssaI NONE
        ssaJ NONE
NFH28_RS12770 NONE
        ssaK NONE
        ssaL 2581656 .. 2581678 -  -3.4    -2.882   CCTAAATATTGAAAG           CCAGGTATCA GAA TAAAACCTGA           TTTATCTTTACTTCA  44 10
        ssaM NONE
        ssaV NONE
        ssaN NONE
        ssaO NONE
        ssaP NONE
        ssaQ NONE
        ssaR NONE
        ssas NONE
        ssaT NONE
        ssaU 2572949 .. 2572963 -  -7.8  -3.21276   CGCTGCGCGATAATA               CGACGA TAG CCGTCG               CATGGCGGCTATTTT  64 481
NFH28_RS12690 2570677 .. 2570703 -   -13  -2.70932   GTTCCTCGCTAATCA         TCTCCCCCGCAT TTC ATGCGGGGGAAT         CTTATTTTCCGTTAG  85 37
        punR 2566537 .. 2566550 -  -9.5  -3.05844   CGCTGGAGCGCAACA               CCGGC GCGG GCCGG                CTGGCAGGCTTTATG  67 460
NFH28_RS12665 2565497 .. 2565533 -  -7.4  -2.57211   ATCTCGCCGCATAAG   TCTGAGTACGCAGAAGG TACG CCTTCTGCGTT-TTAGA    GAGGGATAGAATAGA  57 70
        grxD 2563250 .. 2563267 - -11.3   -5.0133   GATGGCGGTAAAAAA             GCGACCT TTAC AGGTCGC              TTTCTCCTTGCACAG 100 42
NFH28_RS12625 2559842 .. 2559854 -  -4.1   -2.5333   TGAACCATAACAGAT                TCCTC ATA GAGAA                TAATGAGGTTGAGTA  44 56
NFH28_RS12620 2558864 .. 2558920 -  -2.4  -3.22113   ATCGCTTCATAAAAC CTCCGTTACATGTGGTCGCCTGT TAAGTGTAAACC ACTGGCGAAAACATGTA-CGGAA AGTCAACGAGTTGGC  44 43
       sodC2 2558208 .. 2558224 -  -8.7  -2.95521   GCTACAGGAACTACA              GCGTATC TGC GACACGC              TCGCACATCATCATC  62 138
        slyA 2554545 .. 2554579 -  -9.3  -2.92613   CTCCACGCTAAACCA    GGCTTTACGTGTGGTC ACAT GGCCACACGT-ATGCC     CCTGCACCTCAATCG  67 34
        anmK 2552676 .. 2552689 -  -2.4  -3.33744   GGGTCCGGGAAAAAT               TCAG TTAACT CTGA                GTTATTGGGTTAGCC  45 16
        mliC 2552223 .. 2552257 -  -6.4  -4.11183   GTTGATCAGAAATAA    TCAGT-GGGTGGCGC TATTGT GCGCCCCCATACTGA     AAATCTCAACGCTTC  68 31
        pdxH 2551504 .. 2551517 -  -8.1  -2.57982   ACATAGCATAAAACG               GCGGA TTCA TCCGC                ACCAGTGCTTAAAAC  59 56
        tyrS 2550113 .. 2550132 - -12.2  -4.53398   GAACATCAAAAATAA            GGGAGTGA TTTC TCACTCCC             TGTTACTTAATGCCT 100 40
        pdxY 2549127 .. 2549142 -  -3.2  -3.90048   CGTGTCGCAAAAAGA              CCGACCG TTG CGG-CAG              CGCTTAAAGCGGAAG  54 110
NFH28_RS12500 2537382 .. 2537394 -  -4.7  -4.71061   AGCGATAGCGAAAAA                CGTGC GCT GCGCG                AAAAAGTGGCCGAGG  71 120
        fumB 2531048 .. 2531079 -  -9.4  -3.28785   CGGCAAAATAGCGAA      TCATGTTACCGCCC CGCA GGGCGGCGACATTA       CTTAACGCAGCGCGC  74 23
        fumC 2529157 .. 2529176 -    -7  -5.44119   GCCAGTTGAAAAAAA            GCCTCGCG TCGC CGCGCAGC             GTCCCGCCGTGGACG 100 355
NFH28_RS12435 2522369 .. 2522408 - -12.4  -3.28712   CTGGTGGGTTGACAA  CCTCCCCATCGTAATA TCCGTCTG TATTACGATGGGGAAA   CCACGGTCTTTGCCA  90 44
        pntA NONE
        pntB 2516251 .. 2516268 - -12.7  -4.87786   TGAAGTGTATAAAAA             CGGCCTC CGAA GAGGCCG              CCGCACGTTTAAAAG 100 42
        mdtJ NONE
        mdtI 2513623 .. 2513651 -  -5.1  -3.86897   TTTACCGGCGATAAA        GCGGCGCTCACTG CGG CGTTGAAAGCCGC        AGACCGAAAAGTCAC  61 354
NFH28_RS12380 2512218 .. 2512248 - -13.3  -4.43397   CCTGAAAAGAAATAA       TCCGGCGATAGCA ACGTG CGCTATCGCCGGG       CTGGTTTCACGCCAC 100 51
NFH28_RS12370 2509939 .. 2509949 -  -2.4  -3.37612   TTTAAGCGTAATTAA                 TCCC GTC GGGC                 AGCCAGTAATAGCAG  45 11
NFH28_RS12365 NONE
        bioD 2507696 .. 2507724 - -13.2  -2.73441   GATGATTTGTGAAAT        GACCGGCGAGTA TCAGT TACTCCCCGGTC        TGCTGATTGCCTGTG  79 67
NFH28_RS12300 2494184 .. 2494208 - -10.6  -3.56643   TCTACACTCCTGAAA          CCCACCGCGC AGTAA GCGCGGCGCG          GTAGTCACGGAGAGT  81 56
NFH28_RS12285 2492742 .. 2492774 -  -8.3  -4.67755   ATATTGATGTAAAAA      GCGCTGCCAGATCAC AAA ATGTTCTGGTCGCGC      GGCAATGTTACGTAC  89 33
        rspA NONE
NFH28_RS12275 2490141 .. 2490182 -  -2.1  -4.91852   TTTACCAAAAACAAA GGCGCCGATAATTCTGGCT ATAT AACCTGCACCATAGGTGCC  CATTGCCAGAATAAG  69 259
NFH28_RS12265 2487162 .. 2487178 -  -6.5  -2.64099   CCGGGTCATGATAAG              CGGCACG GGT CATACCG              GGATTATCAAAGCCA  51 220
         dcp 2482960 .. 2482970 -  -5.4  -3.33792   ATTATTTACATAATA                 CCAT CAC ATGG                 CGGAAGATATATTTT  56 234
NFH28_RS12240 2482584 .. 2482602 - -12.4  -5.88565   GTCAGAATAAAAAAA             TGCGAGCC TAT GGCCCGCA             TCGTATGTGCAATAT 100 75
NFH28_RS12230 2480927 .. 2480944 - -10.5  -6.11644   GCAGGCAAAAAAAAA             CCGCCGG TTCA CCAGCGG              TAAATGCTTGCATGG 100 267
        eamA 2477750 .. 2477784 -  -2.3  -4.03234   GTGCCGCCACACAAA    TACCG-GA-TCACCA ATATGCA TGGCGAATCACGGTA    TATGCTGCCGCTGAA  54 419
NFH28_RS12195 2476012 .. 2476045 - -18.3  -3.13639   AACCGCATTAAGACA     TTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAA      AATGCGCCTTAGTGG 100 34
         sad 2472312 .. 2472330 -  -4.4  -2.66316   CCTGCGAGTATAGCA             GAGGGCGC CAC GCGACGTC             AGGGCGATTAGACGC  46 33
        glsB NONE
NFH28_RS12170 2470885 .. 2470898 -  -8.1  -3.54146   TGTTGTAACTAAATA               TGCGC TTCA GCGCA                TGAGATATATGACGG  67 107
NFH28_RS12165 2469642 .. 2469655 -  -2.3  -3.12327   TGGGCAGACTCAACA               CACGA CAGG CCGCG                AAAGCCAGGTGTGGG  42 179
        ompC 2467258 .. 2467274 - -10.1  -5.49234   ATAGTCAATAAAAAA              GGACGCC AGA AGCGTCC              TGAAATAATAAAAGA 100 127
NFH28_RS12105 2458423 .. 2458462 -  -7.3  -3.60035   GATAAAGAGAAGCAA  CCGCCGGTAGTCTC CATTACCTTCGCC GAGACTACCGG-GG  AAACTAAACCGAGAT  67 48
NFH28_RS12100 2457366 .. 2457379 -  -8.1  -4.07678   GGCCAAAACAGGAAA               CGTCG CTGC CGACG                AACCTGATCACCTAT  77 294
NFH28_RS12070 2450055 .. 2450066 -  -2.2  -4.57569   TTACCCTTTGAAAAA                CCAT TGAT ACGG                 CGATTGTTATATAGC  61 187
NFH28_RS12065 2448923 .. 2448944 -  -8.1  -4.08216   TTATTCTCGGTAAAA           CCGGTAGCAT TAT ATG-TACCGG           TTTTATTTTATTCAT  74 37
NFH28_RS12045 NONE
NFH28_RS12040 2447103 .. 2447126 -  -5.8  -2.98545   CCTTGACAATAATGA          CGGAGGGCGG AAAG CAGCCCCCAG           CGTGAATCAGTCATA  52 32
NFH28_RS12035 2445843 .. 2445856 -  -2.4  -3.53012   CTGCTGTTTGTGAAA               TCTG AATCCA CAGA                TTGAGGACAGCGAGC  47 251
NFH28_RS12020 NONE
        nhaC NONE
NFH28_RS12010 2438875 .. 2438891 - -10.8  -3.05384   GCGCTCCGGACCCAA              CCGGCC TTGAT GGCCGG              TTTTTTACTGGCGCT  76 96
         bdm 2429457 .. 2429470 -  -6.7  -4.05714   AGTTTTAAGGACAAA               TTCGC TTAC GCGAA                AGAAACGTAACCCCT  70 68
         sra 2429227 .. 2429248 - -13.1  -5.38054   TCCTATAAACAAAAA           CACCATTGC AGAT GCAATGGTG            TTTAACGTCATTTCA 100 52
NFH28_RS11965 2427371 .. 2427396 - -11.1  -2.82317   TAAAGAAGAAAGTGA         TATCCGGCGGC ATTC ACCGCCGGGTA          CGTATTAAATGGAAG  74 30
        adhP 2426035 .. 2426060 - -13.4  -3.92522   TCGCAATCTGATAAA         CAAGGCGCTA TCCTGG TAGCGCCTTG          TTTTCATCTGCTGTC 100 70
        yddG 2419862 .. 2419878 -  -6.7  -2.80252   AGTTTCATAAGATTA              CAAATTA TTT TAATTTG              TGTGATCGAGATCTC  55 408
        ompD 2418604 .. 2418624 - -13.3  -5.13344   ACATCAAGAGAAAAA            GCCAGCCCT GAA AGGACTGGC            TTTGTATTCAGACTA 100 49
NFH28_RS11930 2417764 .. 2417780 -  -9.3  -4.82901   GCGCCGGCAGAAAAA              GCGGCGG CGG CCGGCGC              GATAGAAACGATGGC  93 369
NFH28_RS11920 2415753 .. 2415767 -  -7.1  -3.42405   CACAAAAAAGAGACA               GAGCG TCACG CGCTC               TTTTGAGAACTTATT  65 174
NFH28_RS11915 2414276 .. 2414289 -  -2.4  -3.53444   CGATTTGGCGTTAAA               CCAT TACCGG ATGG                CCGTCCTACAGGTGC  47 49
NFH28_RS11910 NONE
        narH NONE
        narW NONE
        narI 2407495 .. 2407526 - -12.2  -2.89421   TGAAGAATCATCATA      GCCTGTGCGTTGCC GAAT GACGACGCCCAGGC       GTTTTTCTTTGCCCG  80 67
NFH28_RS11890 2406134 .. 2406150 -  -7.9  -3.04144   GCCGCATTGCGAATA              CCGCCTG ATG CAGGAGG              GAAGCACATGGATTT  57 444
        ansP 2402731 .. 2402754 - -14.6  -3.74747   GCAACGCGCATTAAA          CCCGGCAGGCC TGG GGC-TGCCGGG          GAAGGGGAATGTTAT 100 37
NFH28_RS11860 2398837 .. 2398855 - -14.6  -3.19642   ACTATGACTTATCAA             TAGCGGGG ATT CCCCGCTA             TTGCCGGATATTTGC  95 48
        mddA NONE
NFH28_RS11840 2395310 .. 2395324 -  -4.2  -3.79113   ATCGGGCGACAATAA               CGCGTA TAA TAGGCG               AATCATGCTGTTACA  55 300
        srfA NONE
NFH28_RS11825 NONE
        srfC 2388426 .. 2388438 -  -3.3  -5.27335   TGCGTCAAATAAAAA                GAGCA TAT TGCGC                GCGTTTTTTCCTCTG  77 278
        yncL 2388111 .. 2388154 - -15.2  -4.15235   AATCGTGAAAAAATA GGCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCA GCAAGTACTCAAAGG 100 50
        sifB 2381757 .. 2381771 -  -4.3  -2.76162   CAGGGGATTGTAAAT               CCATA CTATT TATGG               TGTGATCAACTCTGG  47 31
NFH28_RS11775 2381193 .. 2381207 -  -2.8  -4.65168   ACCACATCTTAAAAA               TGCC CCAGCCC GGCA               GCGTTGTCGCTTCAG  67 91
NFH28_RS11760 2376946 .. 2376957 -  -5.8  -3.51232   CCGTCCCCAAACCAA                CGAC CCAG GTCG                 GGCAGCAAGTTCTTG  57 492
        ydcK 2373435 .. 2373448 -  -6.7   -3.2964   AAAGCGTGGCTACAA               CAGTC GCTC GACTG                GCCGCAATATGTCAC  56 440
NFH28_RS11730 NONE
        sgcB NONE
        sgcC NONE
        sgcQ NONE
        sgcA NONE
NFH28_RS11705 NONE
NFH28_RS11700 NONE
     aac(6') 2367073 .. 2367093 - -15.5  -4.23674   CCCCAGTAATATAAA            GGTCGGGTA CTA TACCCGACC            TTTTCCTGTATGATT 100 45
NFH28_RS11665 2358949 .. 2358959 -  -4.6  -3.61398   GCTTCGCTTGAAGAA                 CAGG CTG CCCG                 CTTGACGCAAGCCGT  52 156
        steB 2354732 .. 2354743 -    -3  -3.73775   GGCACTCTTATGAAA                TTAC TCTG GTAA                 AAGTCAGGCTTTAAT  52 168
        sseJ 2352057 .. 2352081 -  -4.1  -4.61199   ACGGTATAGACAAAA          CGGCGGCACGT AAA ACCTGGCGCAG          AGTGCCGGAATCCAC  69 333
NFH28_RS11625 2350239 .. 2350268 -  -4.3  -2.67143   ATAGCCAGCATATTA       CCTGATGACATAG CTTA CTATTTCATCCAG        CTATCGACAATGCCA  46 13
NFH28_RS11620 NONE
NFH28_RS11615 2348838 .. 2348857 -  -2.8  -2.79106   AAAGAAGAGAGACCA            GC-CAGCGA TCA TCGTTGTGC            CTCGCTAAAAAAACA  41 14
NFH28_RS11610 2348169 .. 2348181 -  -3.4  -2.64925   ATAGTGCAGTACAAC                TCAG TAACC CTGA                CCGTAATGGCGAAGC  42 13
NFH28_RS11605 2346056 .. 2346072 -    -3   -4.4078   GCGCTGGAATTAAAA              CAACGA AGCAA TCGTTA              GGCAAGCATTAATCA  60 435
NFH28_RS11600 2345177 .. 2345210 -  -6.7  -4.61199   ATTCCATACAGAAAA     CGCCTGCGTCT AACCAGGACCCG TGACGCAGGCG      AAGGAGGACGGGTCT  79 171
        azoR 2338837 .. 2338856 - -13.6  -2.67717   AAACCTAAGAAGTCA            CCTCCCGT CGAA ACGGGAGG             CAAAAATATTTAAGC  86 35
        ldhA 2333860 .. 2333883 - -12.4  -4.13767   GGGGTTATCCGAAAA          TGCTCCCCTG AGCG CAGGGGAGCG           ACAGGATTAGAACAG 100 32
        hslJ 2333165 .. 2333182 -  -6.9   -2.8552   CGCCAGGGATGAAAG             CGGCGAT GTCC AGCGCCG              GCGAAGCGAATTGCG  56 212
NFH28_RS11540 NONE
        nifJ 2329204 .. 2329223 - -13.6  -3.50047   CGTATAAATTGACAA            GCCCGAAC GGAT GTTCGGGC             TTTTTTTGTTTCCAG 100 61
        uspF 2328121 .. 2328131 -  -2.4  -2.75481   TCCCAATGCGAACCA                 TCCC TGC GGGT                 ATCATTTATGCCATT  39 237
        ttcA 2326630 .. 2326658 - -14.6  -2.66008   AAATGATCGATAGCA        TGGCGTCTCAGC GGAGT GCTGAGACGCCT        GCAGATTATTTCACT  89 31
         ogt 2320710 .. 2320722 -  -4.8  -3.36175   AAGTGTGACCGATAA                GGCA CTTTT TGCC                TGTATATTCATAATA  54 33
         fnr 2319699 .. 2319715 -  -2.2  -3.91352   ATATGGTGAATGAAA              CAGAGG AAGCG CTTCTG              CCAGATCAATAAATG  53 92
        uspE 2318638 .. 2318675 -  -9.1  -3.26531   TGAGTAACAGGAATA   GGGTATTGGCCGGATGGC AGC GCCATCCGG-CAGGACGC   AAGAGGGATTAATCG  70 34
NFH28_RS11470 2317064 .. 2317098 - -14.5  -3.12668   CATCCGGACAGGGAA    GCCTCGGTGCCCGATAA CAC TTATCGGGCACC--GGC    TATCTTTTATTTTGT  89 32
NFH28_RS11460 2315257 .. 2315269 -  -4.7  -3.76837   CAGAGAACCGAATAA                CCGGC AAT GCAGG                GGCGCAGGCATTCTC  58 443
NFH28_RS11430 2309361 .. 2309407 -  -7.8  -2.80028   ACCAACATTGTAAAT GTGGGAGCATGAAGGCCCCGCA AGC CGCCCGGCCAGCATACTCCCAT TAATAGTTAAAGTAT  60 273
NFH28_RS11425 2307812 .. 2307838 -  -2.8  -2.82036   AGAGATTATTGAAAC         GCAGGGTAAGCC GGA GGTTGACACCGC         AACCGGAATGACGAA  41 342
        bdcA 2306149 .. 2306175 - -10.9  -3.04248   GAACAGCTTCTAACA         CGGTTGCCG GAGCGTAGA CGGCAACCG         TGTGATATTCGCCTG  76 45
NFH28_RS11395 2302942 .. 2302978 -  -8.5  -2.57013   TGTTAACGCAAGGTA    GCCACGCCCGCCGCCTG ATG CTGGCAGAAGGCATGGG    GATTAAGCGAGCGCC  63 55
        mpaA 2300145 .. 2300157 -  -6.2  -3.58343   CGCAGTAGTCTGAAA                GCCC TGACG GGGC                GCTACGATATGATCA  57 248
         tpx 2298733 .. 2298762 - -17.3  -4.55023   GTGAAGAGTAGAAAA       CAAGAAGGCCTCC GGAT AGAGGCCTTCTTG        TGACAAAAGAGCACC 100 81
        pspF NONE
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF 2285907 .. 2285929 -  -6.3  -3.14051   GCAGTCGCATGAACA           CCCTCAG AGAATCGAA CTGAGGG           TATTTGTTTCGCTTA  57 38
NFH28_RS11290 NONE
NFH28_RS11285 NONE
        fabI 2281881 .. 2281897 -  -3.8  -3.49176   GAAAGGGATGAAAGA              TTGTTA GGTGA TAACAA              ATATCAGAACGCTAT  52 113
NFH28_RS11270 2278583 .. 2278609 - -14.5  -4.96427   GAAGAAGAAAAGAAA         CGGCCTTTGCC TTCTC AGCAAAGGCCG         TTGAGTGAGCTAAGC 100 45
        pdeR 2276339 .. 2276349 -  -2.4  -4.00465   GAGAAGGGAAAAATA                 GGGC TAT GCCT                 GTCTGCACAGGCTGT  53 61
NFH28_RS11260 2276043 .. 2276070 -  -6.8  -2.94622   ACAGACAGTCAGAGA        GCCGGGAAGGGC TAAC GGCCATCCCGGA         CAAATAATCGCTATC  56 39
NFH28_RS11255 2275211 .. 2275232 -  -9.5  -2.72799   GTCTTAGAGAGAGGA           TGATTTGCC ATAG GGCAAACCA            TCGGGAAATATTTTA  69 38
        osmB 2274655 .. 2274680 - -11.9   -4.4078   GGCGGCTAATGAAAA         CGCCACGGT TGTAAATT ACCGTGGCG          TAAAAGTCAACTTTG  95 113
        ribA 2269763 .. 2269773 -  -8.2  -5.19212   ACCAGCAGGAAAAAA                 CGCC GCT GGCG                 GTAATTGCCGGGAAA 100 462
NFH28_RS11185 2261535 .. 2261571 -  -4.3  -3.93026   AAGATCTCAACGAAA    CGCACCATCTGTTCAAA GAG TTTGTGCAGCGGATGCG    TCCGGCTCTGGACAT  60 320
NFH28_RS11175 NONE
        cobO 2258896 .. 2258918 - -10.4  -3.53091   ATCCCGCTGCCGAAA           GGCCTGCCGC GCG GCGGCTGGAC           TGAGCTCGACCTCGC  74 299
        trpL 2256390 .. 2256408 - -10.2  -5.75342   TTTGTTCAAAAAAAA             GCCCGCTT AAC AGGCGGGC             CGGGTATCGTTTGGC 100 46
NFH28_RS11145 NONE
        trpD NONE
       trpCF NONE
        trpB NONE
        trpA 2249800 .. 2249822 - -12.7  -3.18912   CCAGCCACTCATTAA           GCCGCCAGC GTTAT GCTGACGGC           TTAACCCGTTATGCG  86 34
NFH28_RS11120 2249105 .. 2249126 - -12.3  -3.63744   CTCCTGGGCAAAATA           CTGCGAGCC AGAA GACTCGCAG            ATTGCTTGATAAAAG  95 68
NFH28_RS11115 NONE
NFH28_RS11110 NONE
NFH28_RS11105 2247041 .. 2247059 -   -16  -5.14563   GTTGTGACGAAAAAA             GACCCCGC CAG GCGGGGTC             AAAAAAGGACATGAC 100 64
NFH28_RS11095 NONE
NFH28_RS11090 2244833 .. 2244848 -    -6  -2.80016   TTCCATCATCAACGA              GCGTCG AATG CGCCGC               GTAACGGCGCATTGC  53 44
NFH28_RS11085 2244228 .. 2244252 -  -7.1  -3.80535   AAGGCGGAGAAAATA          TCGCCAGGC GTTCGCA GTCTGGCGA          TGATAAGTCACGGGA  68 44
        yciA 2243651 .. 2243701 -  -8.8  -2.52015   CGCAGATTGAGTAAT CTCTGGCGCCGCCAGCCAGGAATA TAC CATCACCTGCTGGCGGCGTAAGCG GGTATACTTAACCCT  63 33
NFH28_RS11070 2242360 .. 2242379 -   -15  -3.91897   TGTGTGAGCCAGAAA            GGGCACCG TATG CGGTGCCC             AACAGGCCATCCTTT 100 41
         cls NONE
NFH28_RS11055 2239932 .. 2239944 -  -4.8  -3.39803   TAGTGACAGTCACAA                CCGT GGGGT ACGG                TGATATTACGCCGCA  51 293
        adhE 2229051 .. 2229068 - -12.7  -6.09196   GGTAAAACAAAAAAA             CGGCCTC AATT GAGGCCG              TTATTGTCATGCTAA 100 54
         hns 2227168 .. 2227184 - -13.7  -5.81412   CTCAGGCAAAAAAAA              TCCCGCC AGC GGCGGGA              TTTTAAGCATCCAGG 100 48
NFH28_RS10985 NONE
        purU 2222353 .. 2222382 -   -10  -3.06261   GGGTAATGCTTAATA       CTGGCCCGCTTCC TTTTG GGAAGCGGGGC-G       CATCATATCAAATGA  73 136
NFH28_RS10975 2222229 .. 2222242 -  -5.3  -3.07816   TGCTCATCGAGTTAA               CTACA TCGC TGTAG                TGAATAATGGTGGTG  51 33
NFH28_RS10970 NONE
NFH28_RS10965 NONE
NFH28_RS10960 NONE
NFH28_RS10955 NONE
NFH28_RS10950 NONE
NFH28_RS10945 2221131 .. 2221142 -    -3  -4.57569   TCATCTGGCGAAAAA                TTGA CCAG TCAA                 AGGAGGCGAAAAAGA  67 147
        narX NONE
        narL 2207722 .. 2207733 -  -3.6  -4.56597   CGTGCCGCTCAAAAA                GCAG CTTG CCGC                 CAGTGAAGTGGCGCA  69 474
NFH28_RS10895 2206145 .. 2206169 -    -3  -5.55769   TGGCATAAGAAAAAA         TAA-ACGCG-GT ATT ACTCGCGTGTTA         GCCTGATTTTCTTGC  83 83
        chaA 2204419 .. 2204439 -  -7.5  -3.53012   CTGCCGCTGGCGAAA            CTGGAGCAG TTC CTGACCCAG            ATAAAAGCGATTGAT  62 136
        lolB NONE
        ispE 2197259 .. 2197273 -   -10  -3.62522   CAACGTCTGGAACAA               GGTGAC GTT GTCACC               GAAGCTCAGCTTGCC  78 160
         prs 2196163 .. 2196176 -  -9.5  -5.76633   TTACAGACAAAAAAA               CCCGC CGCA GCGGG                TTTCAGATCCGGGTT 100 44
        dauA 2194305 .. 2194320 -  -3.2  -3.99324   CGTCACTATGACAAA              CGTTGC CGCC GTAACG               ACAATCGTCGTCATA  55 90
         pth 2193170 .. 2193197 -  -9.8  -2.94099   TTCGCCTATTATACA        CGGCGTGCGGCA AAAA TGCCGCACATCA         CTGGTTATTGCGCCT  70 30
        ychF 2191914 .. 2191931 - -11.3  -5.68438   TTATGAAATAAAAAA             TCCACGC GGCT GCGTGGA              TTTTATGACTTTCTT 100 88
NFH28_RS10810 NONE
        hyaB NONE
        hyaC NONE
NFH28_RS10795 NONE
        hyaE NONE
NFH28_RS10785 2184551 .. 2184568 -  -6.3  -2.86773   GTAAAAAGCTAATCA             GT-ACCGG ACT CCGGTGAC             GTTCCTGTTGAGAGC  55 42
        appC NONE
        appB NONE
        cbdX 2181678 .. 2181709 - -10.9  -5.36364   GTAAAAAGATAAAAA      TAACCGGAGTCAG ACGGCG CTGACCCCGGTTT       ACCTCTTTATTGTTG 100 32
NFH28_RS10765 2180006 .. 2180023 -  -7.7   -5.4492   TATACAGACAAAAAA             TCCACGC CGGG ACGTGGA              TTTTAGCGCAATGAT  95 49
NFH28_RS10760 2178071 .. 2178110 -  -5.1  -2.57881   TAACCGCTGCAGAAC GTGTAAGCGTTGACCCGGT CAGC ACCGGGTCAAC-CT-ACTA  TAAACACGCGTTACT  48 36
        ycgR 2176411 .. 2176421 -  -8.2  -4.68593   CCCATCAGTGAAAAA                 GCCG GGG CGGC                 ATGGGGGGTTGATCC  90 505
        ldcA NONE
NFH28_RS10735 2173294 .. 2173314 -  -2.5  -3.28712   TGCCGTTTGTGACAA            CGTAACCTA ATT CAGGCTAAG            GCGTCGACCGGTCCA  46 72
NFH28_RS10720 2168802 .. 2168814 -  -4.8  -3.76492   CTGAACGGCATGAAA                GGGT TATAC ACCC                GCATTGGTCGCCACT  55 272
        nhaB 2166498 .. 2166528 -  -2.5  -4.68994   ATTATCAGGCAAAAA      TCGGAGCCGGGC GGTGTATT GCCCGGC-CAAA       CGTTACGAAAGCGTT  65 28
        dsbB 2165837 .. 2165852 - -10.4  -5.75342   TTCGGGCAAAAAAAA              CGCTCC CGAA GGAGCG               TGTGTATCAACGACC 100 32
NFH28_RS10700 2164993 .. 2165021 -  -7.5  -3.39895   TGTGCTATTAACCAA       CCGCCTGATGCAC CGTCT GTGC--CAGGCGG       TTTTTTACATCTTCT  63 413
        minC 2162113 .. 2162125 -  -4.9  -3.29973   TTAAAAAGGGATCAA                TTCAA CGG TTGAA                CTGTCAAAGCGTTGT  54 9
        minD NONE
        minE 2160947 .. 2160976 - -15.3  -5.57054   AATAATGTAAAAAAA       TAAAAAAGGCAGA TTCT TCTGCCTTTTTTA        ATCCAGGAATTTTCC 100 52
NFH28_RS10630 2153851 .. 2153863 -  -2.6  -3.73647   CTCAGTCATGAACAA                CAGC AAAAA GCCG                TAGAACGTATCCAGG  50 162
        pabB NONE
NFH28_RS10615 2151596 .. 2151609 -  -2.3  -3.19026   TAGTGTAAGAGGGAA               CGCTG GCAT CAGCT                TAACTATTCACATGA  44 204
        sdaA 2150115 .. 2150143 - -13.9  -5.10968   AGGAAGAGATAAAAA        TTTCGCCCATCCG TAG CAGATGGGCGAAG        GGAGGGGAAACGGCG 100 42
NFH28_RS10605 2147973 .. 2147989 -  -3.7  -2.71791   AGTGGTGCCGGAAAC              GCTTGAT CCT ATCAATC              TGTTAGGCGTTTTGC  43 457
        manX NONE
        manY NONE
NFH28_RS10585 2143648 .. 2143665 - -14.1  -5.76237   CAGAGAAATAAAAAA             CGGGGCC GTTT GGCCCCG              GTAGTGTACAACAGC 100 42
NFH28_RS10580 2143100 .. 2143115 -  -6.2  -4.66537   TTGGTCAATAGAAAA              TATAGC CTTA GCTATA               TTATGATTCGAAATA  78 76
        mntP 2142125 .. 2142135 -  -6.8  -3.61715   GACGTGTGGGAACAA                 CTGG CTG CCAG                 CGCCGGACTTAGCTG  62 80
        yobH 2137260 .. 2137282 -  -9.2  -5.78622   TGACGTTAAAAAAAA           GCAGCTAC GAAAAAT GTAGCTGC           TTTTTTTATAACATC 100 184
NFH28_RS10530 2134866 .. 2134883 - -12.7   -4.3534   TGGCAAGTATGAAAA             GCGCGTC GAAT GACGCGC              TTTTTTTACGCCTGA 100 31
        yebS NONE
NFH28_RS10500 2126371 .. 2126396 - -12.5  -4.46926   CAGTGTAGCATAAAA         CGCTCCGGCGC GAGT ACGCCGGAGCC          TGGTGTTTAACGTGG 100 32
        rsmF 2124843 .. 2124854 -  -3.6  -2.55015   AGCGTAGTCAACGTA                GGCA AAAG CGCC                 AGTCAAAAAGTGCGG  42 57
NFH28_RS10490 2124505 .. 2124520 -  -8.2  -4.34486   AGGAAGAATAAATAA              CCCGCC TGGC GACGGG               TTCTTTTTGAGTCAG  79 37
NFH28_RS10485 2123732 .. 2123758 -  -4.3  -2.91582   GATCTCATTGATAGA        GGCCCGGACAGC CTGG GCTG-CCTGGCT         TTACTGCGTGAGTCC  46 497
NFH28_RS10465 2121093 .. 2121105 -  -3.3  -3.53012   CCCTGGCTTGTTAAA                GCGGC ATG ACCAC                ATTTTCTATATATAA  50 8
NFH28_RS10460 2120101 .. 2120116 -  -7.5  -2.92091   AGAGGTACTCAGACA              GCCGC TTGTAG GCGGC               ATGGTACGGATACAA  59 191
NFH28_RS10450 NONE
NFH28_RS10445 2118088 .. 2118117 -  -2.7  -3.57406   CCGGGACGATAAATA       TCCGCAAATCAGC AAAA GCTGGCGTGCGCA        CTGGGAAAACCTCAA  50 438
NFH28_RS10430 NONE
NFH28_RS10425 2114186 .. 2114196 -  -5.4  -4.10925   ACACACTCCTTAAAA                 TGAC AAA GTCA                 GCGAATTGGTCATAT  65 9
NFH28_RS10420 2113212 .. 2113228 -  -2.2  -4.52857   ACGCTGTACAGAAAA              TTCCCT GTGTT AGGGTA              ATGCAGTATTTCCAC  61 353
NFH28_RS10400 2111192 .. 2111208 - -13.7  -3.29096   TGGATGAATGATGAA              GCTGCGG AGG CCGCAGC              CAGACTTCGTGAAGC 100 330
NFH28_RS10380 NONE
NFH28_RS10375 2109370 .. 2109399 -  -7.9  -3.99985   GAGAGAGTCAAATAA       TTACAGGAGGCAT TGAA ACTCCCCCTGTAA        TATTGCTGTAAAAAA  72 268
NFH28_RS10335 NONE
NFH28_RS10330 NONE
        exoX 2103089 .. 2103119 -  -9.7  -2.91239   TACATAGCGCATAGA      CGCG-CGCCCGCAA CGGC TTGTGAGCGTCGCG       GGTTATTGTGGTGTT  70 28
        purT 2098019 .. 2098056 -  -6.4  -4.83615   CAGGTCTGATAAAAA  TGCGCTAACGTCGCCATC AGGC GATGGCG-CATTAGC-CT   TTTACCGTCACGCGG  80 19
NFH28_RS10280 2092437 .. 2092449 -  -3.4  -4.25104   CTCCGTTGACTAAAA                CAAC TTGGT GTTG                CGTGAACATTGATCC  60 115
         pyk 2090902 .. 2090927 - -14.9  -4.49958   ATCCCATCAAATAAA         TAAAGCCTCTC GTAA GAGAGGCTTTA          TGCTGACAAACCCTG 100 71
        znuC NONE
        znuB 2085541 .. 2085573 -  -5.6  -2.73364   TGCTGAGGTGAAGCA     TGACGGGGCTATTTC AGCG GAAATTGCCGCG-CA      GGCGCTGGATATGCT  47 369
NFH28_RS10235 2082816 .. 2082843 - -10.6  -3.73402   ACATTTCCCATTAAA        CCACCTCTGC ATATAACG GCAGAGGCGG         CTTAATTCAATTAAT  85 74
NFH28_RS10230 2081621 .. 2081638 -  -2.7  -3.67141   AGAACGCGATGCAAA             TGAG-CGA GAG CCGACTCA             ATCTGGCGCGGGGAA  51 53
NFH28_RS10205 NONE
NFH28_RS10200 NONE
NFH28_RS10195 2075840 .. 2075856 -  -3.6  -4.85782   TCCGGGAAAAATAAA              GGCGCA TATTG TGCGCT              AATACAGGGAGAAAA  69 24
        cmoA NONE
        cmoB NONE
        argS 2070510 .. 2070538 - -14.6  -5.06414   CTGTGGCAATAAAAA        GGCCTGAGTCCG TTATC CGGAGTCAGGCC        TGATGATGTTAACGA 100 49
        mrdA 2068273 .. 2068287 -  -2.8  -3.33922   AGGTGGCGGAAAAAG               CTATTC GGG GGATAG               TGAAACATATCTCGC  47 240
NFH28_RS10085 NONE
        uspC 2051597 .. 2051623 -  -5.7  -3.34517   AGCTGGCCTGAAATA         TCGCGAGCGGC GACTA GTCGCCCGCTA         AGGGCACCAGCAACA  56 12
NFH28_RS10055 2046982 .. 2047004 -  -9.8  -3.50447   GTAATGCCCAGACAA           GACAGAGGCG TTT CGCGCCTGTC           GGCTGGCATGATGTG  75 170
NFH28_RS10045 2045664 .. 2045683 -   -10  -4.35747   TAAAAATAAAGGAAA            GCCAGCAC CTTC ATGCTGGC             AATAGCGACCCTGCA  87 83
        ftnA 2044809 .. 2044824 -    -6  -4.63932   GAGGCGGCAATAAAA              GCGCGC TTTG GCGAGC               GGGCACGATTTCACA  75 205
        tyrP 2043188 .. 2043201 -  -3.8  -3.52177   CGGCAAAAAATTTAA               GCAG TGCTGC CTGC                ATTAATGGCTCGTAA  52 105
NFH28_RS09975 NONE
NFH28_RS09970 2035267 .. 2035293 - -12.2  -3.63627   GCGCCAGACGCGAAA         CCGGCTGAAAGC GAT GCTAACAGCCGG         TTTTTTACTACTGGC  89 33
        fliD NONE
        fliS NONE
        fliT 2023242 .. 2023255 -  -3.8  -3.28712   TTCCGTGCTCCAGAA               GTCG TTTAGC CGAC                CTCTGGAGTATGGAA  50 67
        amyA 2021664 .. 2021677 -  -5.9  -5.24129   CCGCGTTAGAAAAAA               CGCCG CTGC CGACG                CCGCTGCCGACGCCG  83 89
        yedE NONE
        yedF 2019621 .. 2019649 -  -9.5  -3.05597   GTTATGCCGTAAAAG        GTCTCCCGCCGTA ACG TACAGCGGGAGTA        TGCGCTTATTTTTGA  71 31
NFH28_RS09880 2018842 .. 2018853 -  -2.2  -3.62046   TCAGGTGCGCAACAA                GCTGG TCG CC-GC                GTATCAGGAAGTCAT  50 176
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
        fliK 2011896 .. 2011910 -  -2.8  -3.96148   CCTGTCCACGACAAA               GCGT GGAAAAG ACGC               GGATAATCATGCTAC  54 49
        fliL NONE
        fliM NONE
        fliN NONE
        fliO 2009561 .. 2009584 -  -2.2  -2.56982   AAGGAATAACAAACG          GCGCATCAGG ATCT CCCGGAACGC           TTGAGTAAGCTCTTC  39 7
        fliP NONE
        fliQ NONE
        fliR NONE
        rcsA 2006640 .. 2006662 - -16.2  -4.14392   GGGTAACCGTTAAAA           CGGACGGCGG TCC CCGCCGACCG           GGCGTGGTACTGGCA 100 205
        yodD 2006058 .. 2006069 -  -2.2  -2.80816   CTTCCAGGCAGCACA                TGCG TTGT CACA                 CTTTTGCTACCGAAC  40 209
NFH28_RS09790 2004682 .. 2004713 -  -2.8  -4.56597   GCGCTGTTTGAAAAA      GCGTCCAGGCTG-GC AAA GCGCTACCGGGAAGC      CCGCCAGCCATTTTC  67 440
        yedA 2000951 .. 2000987 - -12.4  -3.02144   GGAGCGCCTGGAAGA   GTGGATCTGCG-GC-GGC GGC GCCAGCGCGCAGATCGAC   ACCCAGGGGATTCAT  76 41
       ompS1 1996086 .. 1996110 - -17.9  -3.80733   CTTACCCTATAATAA          CAAGCCCGCGC TAA GCACGGGCTTG          AATAACATAAAGCGT 100 42
NFH28_RS09710 NONE
NFH28_RS09705 NONE
NFH28_RS09700 NONE
NFH28_RS09695 1990474 .. 1990490 -  -6.5  -2.72344   GCTGAGGCTGAATCA              GCCATTG CAC CACTGGC              GCGGGCAGTAAAACT  53 272
NFH28_RS09465 1959204 .. 1959220 - -12.3  -6.11644   TGAGTCAAAAAAAAA              GCCACCA TAA TGGTGGC              CTTGTCGACGCTTTC 100 43
NFH28_RS09460 1958368 .. 1958381 -  -3.8  -2.52464   TCTCTGCCCAACCCA               CCTC ACTAAA GAGG                TCTGTCTGGAATCGA  44 338
NFH28_RS09445 NONE
NFH28_RS09440 1956663 .. 1956710 - -10.7  -3.78235   CGATAATTAACAGAA TTACGCTTCAATAAATCCCCG CGGCGC CGGGGATTTAATGCAGAGCAA TTACGCTTTAAAGTT  85 26
NFH28_RS09435 NONE
NFH28_RS09430 NONE
NFH28_RS09425 NONE
NFH28_RS09420 NONE
NFH28_RS09415 1953987 .. 1954000 -  -5.2  -3.05384   TGCTTCTCCATCTAA               CCGG CTGCAC CCGG                TTTAAATCAGATATT  51 32
NFH28_RS09410 NONE
NFH28_RS09405 1952716 .. 1952735 -  -7.8  -5.60993   TCGGTGAGAAAAAAA            CGCCAGAA TTTT TACTGGCG             CACATCGAAAAGCTC 100 39
        mtfA 1951644 .. 1951656 -  -5.5   -3.3482   CAATTGGTTAATTAA                CCCAC AAA GTGAG                GAATTAATGTTCGGA  56 29
NFH28_RS09390 1951447 .. 1951476 - -13.7  -2.73529   GTTGATATAAATGCA       GAAAGCAGACGTC AGTG AACGTCTGCTTCC        CTAAATTTGGCTCCT  86 33
NFH28_RS09380 1950423 .. 1950450 -  -6.2  -5.44119   TGGATGTCAAAAAAA        CCCGGCAAACCT TATC AGATCAACCGGG         TAAAGATAATTTCTT  91 89
NFH28_RS09375 1949728 .. 1949749 -  -5.1  -2.67803   GCGCGACGAAAGTGA           CGCACCGG TTGAGTG CCGG-GCG           CGAAAGATCGCGGAT  48 153
NFH28_RS09360 NONE
NFH28_RS09355 1944263 .. 1944280 -  -4.1  -2.74144   GTGTGACCGGTAAAT             CCCGC-GA CGA TCTGCAGG             CAGCGATGGTGCTGA  45 151
NFH28_RS09345 1943578 .. 1943613 -  -7.5  -3.34192   AAGTGGCTGAATGAA    GCCTTAGCGGGAGGC GGTTCT GTATCCCGTTAAGGC     CTTATTGTGCCGCGG  63 435
NFH28_RS09335 1941498 .. 1941520 -  -7.1  -3.42078   TATACGCGACTACAA           TACCATTGC TCGGG GCAATGATA           AGTTATGGTAGACAA  63 345
NFH28_RS09310 1938648 .. 1938675 - -15.6  -4.18488   ATGGATGTCAAGAAA        CCCGGTAGACCT TATC AGGTCAACCGGG         TAAAGATAAGTTCTT 100 90
        pduA NONE
        pduB NONE
        pduC NONE
        pduD 1914507 .. 1914517 -  -8.2  -3.73224   TTATCCTTTATCAAA                 GCGC CAC GCGC                 AGTTCCTGCGGGTTT  71 10
        pduE NONE
        pduG NONE
        pduH NONE
        pduJ NONE
        pduK NONE
        pduL 1910352 .. 1910378 -  -2.1  -2.57463   AATCTCCTCGACAAT         GCGCTGCAGGG TTTCG CCGTTCATCGC         GGGCCTACCAGCCGG  39 19
        pduM NONE
        pduN NONE
        pduO NONE
        pduP NONE
        pduQ NONE
        pduS NONE
        pduT NONE
        pduU NONE
        pduV NONE
        pduW NONE
        pduX 1901034 .. 1901050 -    -3  -4.30576   TCGCCAGTATGAAAA             GCGA-CT ATGA AGATCGC              GTTGATGACTACATC  62 170
        sopA 1890845 .. 1890864 - -12.2  -2.91264   GGGTCTATGTACAGA            GGGACACA ACGC TGTGTCCC             TTAATTCCATGCGGG  80 52
        sbcB 1889010 .. 1889028 -   -16   -4.4261   TCGGCAATAGTAAAA             CCGGAGGC AGT GCCTCCGG             TTTTTTGTTTGTCAT 100 115
        hisL 1885250 .. 1885276 - -22.4  -6.06723   CGCGCCAAAAAAAAA         GCCCCCGGAAGA TGA TCTTCCGGGGGC         TTTCTCATGCGTTCA 100 66
        hisG NONE
        hisD NONE
        hisC NONE
        hisB 1880736 .. 1880750 -    -5  -2.71011   AGCCGGTGTCAAGGA               TGACGA CGT TCATCA               CAGCACTCCTTTCGA  49 23
        hisH NONE
        hisA NONE
        hisF NONE
       hisIE 1878032 .. 1878046 - -12.8  -5.14563   TTTCTCATTAAAAAA               CCGGGC ATT GCCCGG               TTTTTTTACGCTTAT 100 37
NFH28_RS08765 1829885 .. 1829925 - -15.5  -2.71791   AGTTTTTGGCCAAAG GGCAGAGCCGGATGGCGAG GCTAA CGCGCC-TCCGGC-CTGCC TGGTAAGCAGGCCGG  93 57
NFH28_RS08745 1823084 .. 1823101 -  -4.8  -4.07687   ACGCTGGCGGGAAAA             CTGGCGC TCGCC GCGCC-G             CCGGATATTGAGCAG  62 266
        yegD 1820823 .. 1820842 - -11.4  -3.71649   CGCTGAAACGGGAAA            GCCCCTCC CGAG GAAGGGGC             CAAAATAAGGAAAGG  91 202
        mdtA 1819331 .. 1819341 -  -6.8  -3.08679   TGCCCGGAGGTAATA                 CCTG CAT CAGG                 CGCGCGCTCCTTTTT  58 21
        mdtB 1816209 .. 1816220 -  -3.6  -4.66264   GAAAAGGGCGAAAAA                GCGC ATCT ACGC                 CTCCTCTTTATGGCG  66 20
        mdtC NONE
NFH28_RS08710 NONE
        baeS NONE
        baeR 1809566 .. 1809576 -  -5.4  -3.63744   CGTTGGCGGAAAATA                 TCGT CTT ACGA                 CCTTGTTATTGTTAT  59 52
NFH28_RS08695 NONE
NFH28_RS08690 NONE
NFH28_RS08685 1805239 .. 1805255 -  -2.9  -2.78384   GGCGGCTTGAGGAGA              GTCCTCA CTT TAAGGGC              GGGCATTGTAGCGCC  41 64
        yegQ 1803655 .. 1803680 - -13.4  -4.65666   ATACGCAAAAAATAA         GCCTGCGTAA GGGAGA TTACGCAGGC          CAAGGAGGTGGTTCC 100 162
       sseK2 1801996 .. 1802006 -  -5.4  -2.83371   TATCTTACTAACAAG                 CACT AAC AGTG                 AGTATATAATGATAT  47 339
        yegS 1799913 .. 1799934 - -11.6  -4.78572   GTTCAACGAAGAAAA           GCCGGATG TGAGCG CATCCGGC            CAGCGACAGGTGTTA 100 41
NFH28_RS08650 NONE
NFH28_RS08645 NONE
NFH28_RS08640 1795273 .. 1795322 -  -8.6  -3.62864   CAAATGGATGGTAAA GTGCCGGTGCTGGTGATTAAGCA GGTGG CGCTCGATCAGCAGCAGCGGC-C TATTGAATACAGCAT  68 60
        rcnB 1792078 .. 1792109 - -12.4   -2.6175   GATAGGTGAATGAAC      TTCCGGTCACTTAC AATA ATAAGTGACCGGGA       TGACAATCTTTCTGC  81 209
        metG 1783065 .. 1783082 - -12.7  -5.03145   TAAGCGGTTAAAAAA             GCCGGAG CATG CTCCGGC              TTGTTGCTTATTTCA 100 33
NFH28_RS08580 1782328 .. 1782347 - -11.4  -5.01553   AATTCATAAAGAAAA            GACGCTGC CGAA GCAGCGCC             CTGAGCGACTTTACC 100 69
NFH28_RS08575 1781380 .. 1781395 -    -4  -3.37685   AAAACGCGGCAAAGA              TG-AGGC GGC GCCTGCA              TTGACGGCGGAACGT  49 319
        mlrA NONE
NFH28_RS08550 1777432 .. 1777445 -  -2.4  -2.50016   GGTGATTATCAATAT               TGGT ACGGCG ACCA                TCGCTTCAACGGTGG  38 176
         dld 1769278 .. 1769294 -  -6.5   -5.2197   TATAAAAAGCAAAAA              GCCGC GCAAATG GCGGC              AGCCAGCGCCAGTGC  91 126
NFH28_RS08505 1766862 .. 1766905 -  -5.8  -4.72188   TCAACGCAAAATAAA CGCCGGGTGCCGGATGGC GGCGTTAT GCCATCCGGATACCATCG GGTTTAACGGGCCTC  74 29
NFH28_RS08490 1764157 .. 1764193 - -10.8  -3.30771   CTACAGCGTCCAGAA    CGTGTGCCGGGCAG ATACTATCG CTGCCCGGCGCAGG    AATCAGAAAATCATC  80 41
NFH28_RS08455 1756977 .. 1756987 -  -2.6  -3.55447   GGATTCATCATACAA                 TTAA ACG TTAA                 AACGTGCTACCGATC  48 110
NFH28_RS08450 NONE
NFH28_RS08445 1755725 .. 1755737 -  -7.7  -3.22106   AACAATGTAATGGAA                CCGTA GTT TACGG                GCCTGCTATGTCTTA  64 138
         cdd 1754780 .. 1754793 -  -8.1  -3.30243   AGTCAGGCCGGATAA               GACGC CAGT GCGTC                GCTATCCGGCACATT  65 44
        sanA NONE
NFH28_RS08430 1753507 .. 1753519 -  -2.6  -3.70505   TAAATTAAGGCGAAA                CGCA AATAA CGCG                TTTTAATGATCTAAA  50 180
NFH28_RS08425 NONE
        preA 1750958 .. 1750984 -   -13  -3.54475   TTGCTTATCAGATAA        CCCGGCGCAGC GAAACT GC-GCGCCGGG         CTTCATACCGAGAGC 100 40
        fghA 1742541 .. 1742553 -  -9.1  -2.74012   GGAGGAGGTGAATTA                CAGCG CGG CGCTG                GAAAATTCATTATGT  66 35
        serB 1739719 .. 1739730 -    -3  -2.59431   TCGCGTTATAATTCA                TCTT CAAT AAGA                 AAAAGAAGCAATTCG  40 4
NFH28_RS08365 1738317 .. 1738349 - -19.2  -2.98823   CGTTTCTGACAGAGA      CTGGCGACAGCCGC GTTTT GCCGCTGTCGCCAG      AATGTTATAACCGAT 100 30
NFH28_RS08345 1732242 .. 1732254 -  -4.1  -3.21218   ACGGTTCATTACGAA                CGCTA TGA TAACG                GGTTAACAGGCGTGA  48 52
         nfo 1731289 .. 1731326 - -12.9  -3.73486   GGCATAAGAGAAACA   CGCTAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTATTG    CCTGAAGAACATTGA 100 44
        setB 1725664 .. 1725684 -  -2.6  -4.83615   TAGCGTGCATAAAAA            TATGTTAC AAACG GAAACATA            TGCAAAGCTATCCTT  72 298
        yeiP 1723523 .. 1723537 -  -5.6  -5.10665   AGTCAATAAATAAAA               GGGGCA GAC TGCGCC               CTGGGGCGCAGCCGA  80 53
NFH28_RS08295 NONE
NFH28_RS08290 1721566 .. 1721601 - -13.6  -4.01853   GAATATCATCATAAA    TTACCTTCAACGAT-GT AAA ACTATCGCTGAAGGTAA    TGTTAATTACATAGG 100 41
        mepS 1720562 .. 1720579 - -11.3  -4.59414   GGATAATAAGCAAAA             GCACTGC TGAA GCAGTGC              TTTTTATGTCGTCTC 100 77
NFH28_RS08280 1718707 .. 1718719 -  -3.3  -2.96444   TCGCTGAATAATAAG                TGACG TTG CGTCT                GATGTGAATCCGTTA  44 55
NFH28_RS08275 NONE
NFH28_RS08270 NONE
NFH28_RS08265 NONE
        yejF 1712867 .. 1712880 -  -4.5  -4.09864   ACCGATTCCGCAAAA               CGG-GC AGA GCACCG               AGAATAGTCTGGTGG  62 262
NFH28_RS08240 1708448 .. 1708477 -  -4.9  -3.61517   ATCTCTCTTTAATAA       TTCCTGCTACAGG CGAC CCAGCAACAGGTA        AGTGATCTGCTTTGC  57 101
        rplY 1708106 .. 1708121 - -11.8  -5.68039   AAACGCATAAAAAAA              CCCCGC CGGG GCGGGG               TTTTTCTTCAACTTC 100 48
NFH28_RS08220 NONE
        yejM NONE
NFH28_RS08210 1703998 .. 1704015 -  -8.4  -5.65177   ACAGGCATAAAAAAA             CCAGCC GTAACA GGCTGG              TTCTTCGAGGAATTT 100 41
NFH28_RS08200 1703031 .. 1703066 -  -5.4  -4.70319   TTACGAAAATGAAAA    TCCGCCACAG-CGCGAT CAA AACGTAACTATGGCGGA    TATTGAAAAACTTTA  74 38
NFH28_RS08160 1695688 .. 1695708 - -12.6  -3.63694   ATGGACGTTTAATAA            TACGCCCC ATGCA GGGGCGTA            TTATTTACTGGATGA  95 30
NFH28_RS08125 1689591 .. 1689603 -  -3.3  -3.92075   ATTGTTAGCGACAAA                GGCGT GGT AGGCC                GTTTACCTTACCAGA  55 73
        narP 1687479 .. 1687518 - -15.6  -2.78206   CAGGAGAAATAAGAC  CCTGAC-GGCCCGGTGGCG CGG CGCCACCGGGCCTGGCTTG  TTACTGCATTCCGCG  93 26
         eco 1673830 .. 1673840 -  -4.6  -5.49809   GAAAGGGCAAAAAAA                 GCGC ATT GCAC                 TGCTGCTGGCGCTGG  93 500
        rcsD NONE
        rcsB 1664126 .. 1664154 -  -6.6  -5.24129   CGCGGGCATAAAAAA       TGCCGGA-TGGCG GCGT CGCCTGTCCGGCC        TGTAAAAGATGAGTC  87 95
NFH28_RS07975 NONE
NFH28_RS07970 1653734 .. 1653744 -    -4  -6.24157   ATTCATAAAAAAAAA                 TCAA AAT TTGA                 TCGAATGCTGATTTC 100 105
        nrdA 1651161 .. 1651178 -  -3.4  -2.71144   TAGGCCGGGTAAGCA             TAGCGC TACCCG GCACTA              TTCATCAGATCTTAC  43 30
        nrdB NONE
        yfaE 1649212 .. 1649223 -  -5.8  -3.06183   GTGAGCTGGATTTAA                TGGC GGCG GCCA                 GTAATTTCCTGCTGT  52 488
NFH28_RS07945 1647361 .. 1647397 -  -9.4  -2.54523   CCATAGTCGAAGTGA   CGCGCCGGATGAGGGCA TAAA CGCC-TCATCCGGCCTG    GCGCAACGTTTGCCA  68 82
        glpA NONE
        glpB NONE
        glpC 1640235 .. 1640250 -  -5.4  -3.88498   GGGGGATATATTAAA              TCAGGC ATAG ACCTGA               TTTTCTTATTATTCA  63 343
        sseL 1638835 .. 1638846 -  -5.8  -4.88067   AGTTATTGAGAAAAA                TGCC GGAT GGCA                 CGTATGCCTTACGCA  83 299
        nudI 1631822 .. 1631841 -  -9.3  -3.76413   TGTTAAAAGCGTAAA            GACAGCC TGAAGC GGCTGTC             GTCATTATAATAACC  77 30
        arnB NONE
        arnC NONE
        arnA NONE
        arnD NONE
        arnT NONE
        arnE NONE
        arnF 1623132 .. 1623155 -  -2.3  -4.78149   GTCAGAACTGAAAAA          CGGAGGGAT TAAAAT ATCTCGCCG           TGCGCTCCAGCAGTG  68 415
         rbn NONE
NFH28_RS07780 1613184 .. 1613222 -   -11  -3.14132   GGCTTGTCTCACTAA   GCGTCAGGGGATGCCT GTACTGT AGGCATCCCCTGTTAC   GTCAGGCGCTTTTGC  78 27
NFH28_RS07770 1610538 .. 1610555 - -12.7  -3.66018   TGATGATGTCAATAA             CCGCCGA TTTA TCGGCGG              TTGAGGCTGATGAGC  95 245
        alaA 1591628 .. 1591651 -   -14  -3.21062   GAGATGAAGATGCAA          TTCAGGCTAC CGAA GTAGCCTGAA           TTTAAGATTATTGAT  93 33
        yfbR 1590890 .. 1590917 - -10.6  -4.39166   CCCCAGACAGGAAAA        GGCCTGAT-GGCG CTA CGCTTATCAGGCC        TACGGGAAGAACGGT  90 74
        ackA 1585696 .. 1585723 - -16.4  -4.37886   GGACGGGTTACAAAA        CAGCACCGCCAGC GAG GCTGGCGGTG-TG        AAATCAGGCAGTCAG 100 29
         pta 1583470 .. 1583481 -  -7.2  -3.30124   CTGTAGGCCGGACAA                GGCG TTCA CGCC                 GCCATCCGGCATTAG  63 50
        yfcC 1581511 .. 1581527 -  -5.7  -5.03715   ACTACGCGGAAAAAA              CGCGGCG TAT CGTCACG              TGTGAAAACCACAGC  84 266
NFH28_RS07620 1576421 .. 1576435 -  -4.2  -4.66833   CCGCAACGCCAAAAA               CGAAGC CGC GCTCCA               GGAGAAACCGGAAGA  71 56
        yfcG 1573687 .. 1573703 -  -5.1   -2.6381   AGAATCTGCATATGA              CCTCC AGAGTAG GGAGG              ATTTCCTCTTCCCTA  48 130
NFH28_RS07595 1572743 .. 1572768 - -14.7  -4.54026   GCTGAAATAAAAGAA         GCCCGGCG-GCG CAT CGCTCACCGGGC         AGGATACGGCGCTTT 100 46
NFH28_RS07540 1560527 .. 1560563 -  -4.3  -3.48474   GAAATGCATAACGAA    GGCTAATGGCTTTGC CAGCGGC GCAATGCCGCTGGCC    GATGTCAATTACGCA  54 30
         flk 1550084 .. 1550105 - -14.5  -3.54424   GTGGAGGTTGTGAAA           CGCGTACCT GCAC AGGTACGCG            GTACGGCGCTCGGCG  95 192
NFH28_RS07475 1547974 .. 1547993 -  -3.6  -4.63218   TTCCTGTTAATAAAA            TACGTAAT AGCA ATGACGTA             ATGCTTTAACAGTAT  66 154
NFH28_RS07470 NONE
NFH28_RS07465 1547044 .. 1547061 -  -3.3  -3.71848   CTCCGGTACGAACAA             GAGACCG ATGG CGGTTCC              CTTTTTTAATGCTTC  53 31
        mnmC 1542023 .. 1542058 -  -6.9  -4.60924   CAAAGTCTGGAAAAA   GCGATCGGCGCCGGCGA ACTG TCGCCG-CGC-GATCAG    GCGTTAGTCAAAGCG  78 128
        smrB 1536499 .. 1536510 -  -7.2  -3.05384   TCCTGCCGGAGCTAA                CGCC CTGT GGCG                 ATGTCGGTCTGGTCA  57 361
        fadL 1530412 .. 1530430 - -10.3  -5.33405   GGCAGTAAATAAAAA             GGTGAGC GCAAT GCTCACC             TTTTTGATCCGTTTC 100 50
NFH28_RS07375 NONE
NFH28_RS07370 1527826 .. 1527857 -  -8.9  -3.55761   CAGCGACTGGGTAAA      TGCGCATGATAATG ACGAA CACTA-CATGCGCA      AACTTACCTTCCGTG  68 427
        pgtP 1520591 .. 1520609 -   -16  -3.11072   GCCAGTGAATAGATA             GCGCCGAC AAT GTCGGCGC             TTCTGTTCCCCAGGA 100 52
        lpxP 1518660 .. 1518671 -  -7.2  -5.10163   AATGCCAAAATAAAA                GGCC TTGC GGCC                 TTTTTCAGATGTAGA  86 30
        ypdK 1518162 .. 1518181 - -13.6  -4.28487   GAGTAGAAAAGCAAA            CAGGAGCC CCAT GGCTCCTG             TTTTTCTTTGCATTG 100 43
NFH28_RS07315 1513496 .. 1513551 -  -9.1  -3.61398   CCTGCTGCTCAACAA TGACGGCTATACCG-TAGAGCGCGCCA TTCA CGGCGCGGCCCAGCGGTATAAC-GACA TCGCGAGCTGGAACT  68 263
        mgrA 1510945 .. 1510956 -  -3.6  -4.07885   CATTTTTTGCTAAAA                CCGG CCCT CCAG                 AATAGCGTCAATTTC  57 8
NFH28_RS07300 1510450 .. 1510485 -  -7.7  -3.74227   ATAAAGACAGAAAGA   TAGCAGGCCCGATG-CG TGGG CGTCATCGGGC-TGTTA    TTCAGCAGGAGGCTT  71 39
        nupC 1507614 .. 1507631 - -12.7  -5.61596   AGCGGCATAAAAAAA             CCGGGGA TAGC TCCCCGG              TTTCTGCATTAAACC 100 46
NFH28_RS07270 NONE
NFH28_RS07265 1504012 .. 1504040 - -13.3  -3.82946   CCAGCTGAAACAGAA        TAAACGGCAGG GCAGACG CCTGCCGTTTA        TTATTTGTTAGTCCG 100 33
NFH28_RS07255 NONE
NFH28_RS07250 NONE
NFH28_RS07245 NONE
NFH28_RS07240 1501902 .. 1501916 -  -8.5  -5.24989   GCAGATAGCAAAAAA               GCGCC TTTAG GGCGC               TTTTTTACATTGGTG  95 36
NFH28_RS07215 1497350 .. 1497364 -  -4.9  -3.37522   AGGCCAGCGAATTAA               CCGCC GCGAG GGCGA               AAGATCCGCTGTATC  54 110
NFH28_RS07205 1495127 .. 1495141 -  -7.1  -3.18383   ACCGTGATTGATGAA               GCGGA AATGA TCCGC               TTACTGGGTGCCTGA  62 257
        cysZ 1491048 .. 1491073 -  -9.1  -3.10715   GTTATCAGTATGGAA         TAAGAGACAGC ATAA GCCATCTCTTA          TTTATACATTTTTAC  68 42
        cysK 1489911 .. 1489926 -  -6.8  -5.26316   GCAGGCCACAAAAAA              GCACCC AAAA AGGTGC               TTTTTTACGCGTTTT  87 54
        ptsH 1489298 .. 1489325 -    -2  -4.11692   GACTGATTTTTAAAA        GAACCCG-GAAAA AAA CTTACTCGAGTTC        CGCCATCAGTTTGAC  55 14
        ptsI NONE
         crr 1486951 .. 1486968 - -12.7  -5.50499   GTACAGGCAAAAAAA             TGGCGCC CAAA GGCGCCA              TTCTTCACTGCGGCA 100 45
        ptsJ NONE
NFH28_RS07145 NONE
NFH28_RS07140 NONE
NFH28_RS07135 1482535 .. 1482554 -  -4.2  -3.87815   GCTGATTGGGATAAA            CACAGGCA ACGG CGCCTTTG             ACAAGCGGGAATATC  57 108
        amiA NONE
        hemF NONE
NFH28_RS07065 1470963 .. 1470980 -  -2.7  -3.45945   TTTATCTACAATGAA             CTCGT TTATTTCT ACGAG              CCTGCTTTTATTCAA  48 37
NFH28_RS07060 1469507 .. 1469520 -  -9.5  -3.30124   TGGTAGCCCGGACAA               GGCGC GCCA GCGCC                GCCTCCGGGGAAGCG  74 91
         tal NONE
         tkt 1448595 .. 1448635 - -14.2  -3.40371   GAGTCTACGAAGTAA  TTTTGCACAGCCTACAGA ACAGG TCTGCAGACTGTGCAAAG  TCTGTGTTGCTAACG 100 47
       pbp4b 1444949 .. 1444961 -  -5.5  -3.53012   CTGTCCGTGTCCAAA                CTGGC TGC GCCAA                TAACGCCTACAGAGA  57 55
        narQ 1440660 .. 1440673 -  -3.7  -3.57561   TGCCAACGCCGGAAA               GCCTG ACAT CTGGC                CTTCCGGCGATTTGC  53 47
        acrD 1437336 .. 1437356 -    -9  -4.78237   TAGGGGATAAGAAAA            GGCGACTC AACGA AAGTCGCC            TTTTTTGTGCCCGAC  90 66
NFH28_RS06915 NONE
        dapE NONE
NFH28_RS06905 1434677 .. 1434691 -  -5.6  -4.09864   AGCGACGCGGGAAAA               CGGCTG GCG CAGCAG               GAACACCGGCGTTTG  65 442
NFH28_RS06875 NONE
         bcp 1427836 .. 1427848 -  -4.7  -3.16683   ACGTGAGGTGATTAA                CGCTC CCG GCGCG                GCAGGCGGAATGGGC  50 225
        bepA NONE
        arsC 1424300 .. 1424315 - -11.8  -3.12668   CCTGAAACTGTAATA              CGCCGC GACG GCGGCG               TTCAACGGTTAACCG  81 34
        purM NONE
        purN 1419409 .. 1419427 -  -4.6  -2.94099   CTGTCCGATGACATA             TTATTCGT CAG ACGCATAA             CCTTGCGGCGGCAGA  48 7
        ppk1 NONE
         ppx 1415574 .. 1415600 -   -18  -3.78022   CTGAGATTCAGTAAA         GACAGACGCCGC GGC GCGGCGTCTGGC         TCACAATTTACGCGG 100 33
NFH28_RS06800 1412528 .. 1412540 -  -3.3  -4.11484   CTGAACTGCTGAAAA                TTGGC TGT GCCAG                CTACCGGGAGTTTAA  58 240
NFH28_RS06790 1411401 .. 1411420 - -12.2   -3.1996   TAAATGTGAATTTAA            CCCTCTGT TTTT ACAGAGGG             TTTTTATTTATGTGC  83 490
        xseA 1406579 .. 1406601 - -12.7  -4.57474   GTAAGTTAGACAAAA          CCGGGC-GGG TGTT CCCTGCCCGG           TTTTGAGGCGAATGA 100 153
        sseA 1360413 .. 1360425 -  -3.3   -2.5547   ATGGCGGATATTAAG                CGGGT TCA ACCGG                TAAATCGGTACGCGC  42 8
NFH28_RS06655 1359377 .. 1359392 - -10.4  -5.67967   ACCAGCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGGCCTG 100 126
        timP 1358931 .. 1358956 - -14.7  -4.66318   ATCATCTGAAGAAAA         GAAAGCCGCCC AACA GGGCGGCCTCC          TGGCTTACCTGCTCT 100 30
        suhB 1348884 .. 1348909 - -16.9  -2.74784   ACGCCTGAAAAGGCA         CGGCGGATGAG TGGC CCCATCCGCCG          AAGAGACTTAGCGCT 100 33
NFH28_RS06585 1347884 .. 1347896 -  -5.5  -3.03028   AAATATGCATATATA                CAGCG TCG CGCTA                TTTAGCGGATAGCGC  52 23
        asrA NONE
        asrB NONE
        asrC 1344350 .. 1344373 -  -2.4  -4.82901   GGCGGGCCATAAAAA          GGTTACGC-GC GCT GCTACGTAAAC          CTGTCTTTATCGCTT  68 475
        csiE 1341446 .. 1341464 -    -3  -4.72272   CGCCCTGAGTAAAAA             GCTATTCC GCC GGTTTAGC             GCCCGCGACTTGCTG  70 365
        hmpA 1337655 .. 1337682 -  -6.9   -4.2679   GAACGGGGAGGAAAA        CGGGCGTTCGC CTTAAC GATAACGCCCG         TTTTTTCAGAGGATT  72 49
        cadC 1335873 .. 1335908 - -12.8  -3.23853   TCTTTGCAATGAATA    TGTTGCCAAAATTAAC ATAA GCTATTTTTGGCAACA     TGTTTTTCACAAAAT  86 97
        cadB 1334224 .. 1334238 -  -2.7  -3.53012   CTTGTTCCTGGTAAA               GTGGG CCCCT CCCGC               TACGCTATAGCAGGT  48 75
        cadA 1332031 .. 1332052 - -14.5  -5.00616   TGCTGCGTGAAAAAA           GGGAAGTGG CAAG CCACTTCCC            TTTGGTACTTATTTC 100 34
        dtpD 1330479 .. 1330489 -  -2.4  -3.62597   CGTACTGGCGAAGAA                 GACG ACG CGGC                 TATCTGATGTGCCGA  49 81
NFH28_RS06490 NONE
        mltF 1320128 .. 1320156 -  -9.4  -4.17132   AAAGCTCTGAAGAAA        GCCGACCGTGCG GAAGG CGCGGGGCCGGC        AGTATAGCGCAATGC  84 83
NFH28_RS06460 1315558 .. 1315569 -  -3.6  -4.07124   CAGGATTTACATAAA                GGCC GACT GACC                 GAAATCGACTATTTA  58 175
NFH28_RS06445 NONE
NFH28_RS06440 1311971 .. 1311982 -  -3.6  -4.10161   GATGAGCTGGGAAAA                CCAC GTTT GCGG                 CTGTGGGGCGAGGCG  60 248
        gogB NONE
NFH28_RS06395 1302846 .. 1302856 -  -3.2  -3.29386   AGAAAAGTAATTCAA                 GCCT GTT AGAC                 CTATCAATTAATACA  48 209
NFH28_RS06370 1300740 .. 1300750 -  -5.4  -3.91897   TCTGGCATGGAGAAA                 GTAC CGG GTAC                 AGGTAAACCGTGTTG  61 184
NFH28_RS06295 1284625 .. 1284639 -  -2.7  -3.41671   GAAATACCGAAGCAA               CTGGG GTATG CCCTG               AAACAACAACTGAGG  47 107
NFH28_RS06240 1275195 .. 1275210 -  -4.7  -5.64421   AGTGCAAATAAAAAA              TTCCC GCAGGA GGGAA               AAGGAGCTTACCTGC 100 241
        gogA 1272563 .. 1272581 - -11.8  -3.76641   ATCCCAATAGCTAAA             CTCCTCTT AAG AAGAGGAG             AGATTAGAATGAAAG  93 437
NFH28_RS06130 1263257 .. 1263272 -  -7.5  -5.75478   AATGACATAAAAAAA              CCGCC AGTTAA GGCGG               TTAGTAGTTTTAAAG 100 46
NFH28_RS06120 NONE
NFH28_RS06115 1262263 .. 1262287 -  -4.2  -3.30159   TCAATTCGTGTAGAA          TGGAGGTGCC TTAAC AGCACCCCGA          TATATCTGGTTGTTA  50 102
NFH28_RS06110 NONE
NFH28_RS06105 1258152 .. 1258168 -  -5.1   -4.3898   ATTAGGCGCATAAAA              CCTCC TCAGGTG GGAGG              GCGTACCCCCTCCCG  68 47
NFH28_RS06100 NONE
         xis 1257194 .. 1257206 -  -3.3  -3.97102   ACGGAAAAGTAAGAA                GCCGA TAA TCCGC                CCGATCATCCCTGAA  56 402
        nadB 1250801 .. 1250831 -  -7.4  -3.21099   CCGCCTTATTACGAA       CCCGGTGTGGAATG CGC CACGCCGCAGCGGG       AGCAGGCGCGTTACA  59 336
        srmB 1248927 .. 1248948 - -14.5  -5.80817   TGGAAGATAAAAAAA           TGCCGGGTT AACG AACCCGGCA            TTATCATCACTCTTC 100 32
        eamB 1247307 .. 1247331 - -14.3  -3.94877   ATCCGGTAATAACAA          GCGGAAGAGGC CGG GCCTTTTCCGC          TTTTGTTTTATTTGG 100 42
         ung 1245847 .. 1245860 -  -9.5  -3.48276   CGCCCGGTCAGACAA               GGCGC TTTC GCGCC                GTTATCCGGGCGATA  75 60
        trxC 1244092 .. 1244112 - -14.7  -4.16943   TGGCAGAGGTGAAAA            CGGGGCACA AGA TGCGCCCCG            TGGCGTTTACAGCGC 100 32
        tapT NONE
         pat 1240597 .. 1240621 -  -2.1  -2.74269   TGCAGACGACATAAG          CGAGCAATAAT AAC ATCAGTACCCG          TTAAAGTGGTCAACA  40 56
NFH28_RS06005 NONE
        pssA 1239159 .. 1239175 -  -9.4  -4.66938   ACTCCTAAGAGAAAA              CCCCGT ACAGG ACGGGG              CTTCGATTACAGGAT  91 32
NFH28_RS05995 1238603 .. 1238616 -  -3.8  -2.74144   GCGGGATCCTGAAAG               CGGA GATGTT TCCG                GCGCAGGTTCGCGCC  43 223
        bamD 1225756 .. 1225775 -   -15   -5.8187   TACCGAATAAAAAAA            CGGCAGCC GGAA GGCTGCCG             TTTTGCTTGTTTGTA 100 46
        raiA 1225145 .. 1225160 - -11.8   -5.4505   CCTGTCAACAAAAAA              CGCGCC CGAA GGCGCG               TTGGCGATACACTCA 100 51
        pheL 1224966 .. 1224986 -   -14   -5.5112   GTTATCAATAAAAAA            GGCCTCCC GGTGG GGGAGGCC            TTCTTGTTCGTCTTC 100 49
        pheA 1223589 .. 1223605 - -12.3   -3.0497   AGAGCAGCTGGAAGA              GTACCGG TTG CCGGTAC              GTTGTCCGACGATGG  76 195
NFH28_RS05910 NONE
        dgcN 1218360 .. 1218382 -  -6.8  -4.30995   GCTTGTAGAAAAGAA           GGGGCTGGCA TTA CGCTGGCCCC           TTTTTTATGGGTTTG  74 119
NFH28_RS05875 NONE
NFH28_RS05870 1212342 .. 1212359 - -11.3    -5.252   GACGGCGATAAAAAA             GGCGAAC CGGA GTTCGCC              ATTGTGTTACTCCGC 100 32
NFH28_RS05865 1211145 .. 1211187 -  -2.7  -5.14563   CGCGCGATGAAAAAA TTGCGAATCTGGAAGTTCAG CTTG CAGAAGC-CCAGACTCGCGA ACGCGACACCGTGTT  79 478
        nadK 1209968 .. 1209996 -  -3.3  -3.92178   ATGACTGTAATTAAA        TACAGTATAAA CTGGTTT TTTATACAGTA        AAGAGGCTAACGTAA  55 43
        recN NONE
        bamE 1207480 .. 1207491 -  -4.4  -4.85782   CTGGCGAAAAATAAA                GTAG GTAT CTAC                 AGTCGTCCGGTAAAA  77 314
        smpB 1206184 .. 1206212 - -13.3  -2.53613   ATGAGATATGAACAT        TGACCAGCTTC ATACTGA GAAGCTGGTCA        CAAAAAATGTCTATT  84 39
        bapA NONE
NFH28_RS05820 NONE
NFH28_RS05815 NONE
NFH28_RS05810 NONE
        ssrA 1188820 .. 1188845 - -10.5  -5.49234   ACATGCAACAAAAAA         GCCTGCAACTC ATTG AAGTTACAGGC          TTTTTTAAGGTTCAT 100 62
NFH28_RS05800 1187347 .. 1187368 -  -7.9  -3.98172   ATCAACACGGATAAA           GCGCCCG-CC TAT GGTCGCGCGC           TTGCTCTGCTCAAAC  72 182
NFH28_RS05785 1185403 .. 1185420 -  -5.6  -4.79223   TGAGATTATCAAAAA             GGATCT TCACCT AGATCC              TTTTAAATTAAAAAT  76 90
NFH28_RS05775 1184069 .. 1184086 -    -7  -3.29381   GGAGAAGAGGAGCAA             CGCGAT CTAGCT ATCGCG              GCCGCGATCAAGCAG  56 122
        merR 1172905 .. 1172919 -  -2.8  -3.14132   TGGCCGCTGTATGAA               TCCC GCCTGAA GGGA               AAGCTGCACGTAATC  43 300
     tetR(B) 1170290 .. 1170319 -  -5.2  -3.36273   CTTTGTCAACAGCAA       TG-GATCACTGAA AATGG TTCAATGATCACA       TTAAGTGGTATTCAA  53 243
        gltS 1167149 .. 1167163 -  -4.2  -2.90496   GTTTTGGGGAAATTA               TGAGGG GAT CTCTCA               GTGCTCAGCATGTTT  46 379
NFH28_RS05650 1165178 .. 1165196 - -11.8  -3.28712   CTGGTGGTGCGATAA             GGTTCTGA TTT TCAGAACC             TTTTTTTAAAGTTTA  85 31
        iroB 1158773 .. 1158804 -  -2.3  -2.97021   CGGTGAAAGATGAGA      TATGGCGAC-ACAC GCTGG GTTCAGCCGCCATA      TTGTCATTGCGCTGC  41 46
        iroC 1155030 .. 1155052 - -13.5  -3.77831   GTATCAATAGCTAAA           GCGGCTGTT ACATG AACAGCCGC           TTGCGGGCTTTCTTT 100 64
NFH28_RS05605 NONE
NFH28_RS05600 1152495 .. 1152510 -  -3.2  -4.87291   TACGGCAAGCAAAAA              CCGC GAACACAT GCGG               AGTCGCGTAGTGAAG  74 285
NFH28_RS05580 1146967 .. 1146990 -  -3.2  -4.18802   ATACAGATTTCAAAA          GATCC-GCT GAACGGT AGCAGGATC          TGCACATCCGCGTAT  60 50
NFH28_RS05575 1145788 .. 1145816 - -13.3    -3.445   GGATTTATGAAAAAT        CTGGACGTAAAAA ACA TATTTACGTCCAG        GCTTTCTTTTTAGCA 100 35
NFH28_RS05555 NONE
NFH28_RS05550 NONE
NFH28_RS05545 1138704 .. 1138734 -  -2.5  -3.57263   AGCGTTATGGGGAAA      GTGATGCTGGCGGGG TTG CCCGGCCTG-A-CAC      ATGAGCGCGTAGGCC  50 70
        glaH NONE
        lhgO NONE
        gabD NONE
        gabT 1133400 .. 1133411 -  -2.2  -3.30124   TTGTAGGCCGGATAA                GACA GTTA CGTC                 GCCACCCGACGCTGC  45 51
        gabP 1131883 .. 1131904 - -10.1  -2.57931   TTTACTCCTGAGAAG           CTTCCCGGC TGAC GCCGGGAAT            AACTAACGTAGGTTT  70 28
        csiR 1130829 .. 1130840 -  -7.2  -4.93288   AACATTTAAATAAAA                CGGG AATA CCCG                 ACGCTGACAAAGTGA  91 373
NFH28_RS05500 NONE
NFH28_RS05495 NONE
NFH28_RS05490 1129114 .. 1129165 -  -4.3  -3.07522   ATAGCTTTTAACAGA TGGCGCTTCGTTTCCTGTCTC TATTAACCGG GACTCAGGGAACGTTGCGCCA TGCTCATTTTGATAA  49 42
        alaE 1127511 .. 1127535 - -15.7  -4.35675   AAAAACCGACTAAAA          GCGCGACTGGC AAT GCCAGTCGCGA          CGCTAACTTACGCCT 100 33
NFH28_RS05470 1126554 .. 1126579 -  -3.9  -2.61695   GGCATGGCGAAACAG         GTCGCATGTCA GCTT CGACAGGCGAT          ACAGTAACCGTTTCG  44 116
NFH28_RS05460 1124490 .. 1124509 -  -6.3  -4.67635   TTTAAAATGAGAAAA            CGGCGCG ATGAAA CGCGTCG             GATTGTCGTGTGTTG  78 248
        nrdH NONE
        nrdI NONE
        nrdE NONE
        nrdF 1120682 .. 1120713 - -13.2  -4.41616   ATTGCTTGAAATAAA      GGCATGGGAAAT GTAACGTT ATTTCCCATGCC       CGTAAGGTTAAAAAT 100 33
        proV NONE
        proW NONE
        proX 1116901 .. 1116919 -  -3.2  -3.51924   TCGTGATTCAGATAA             TTATTTCC TGG GAAAACAA             TCATAGCGGATGTTG  50 148
NFH28_RS05420 1115256 .. 1115270 -  -5.8  -4.29621   GACAAATAAAGTAAA               TGTATT ATT AATACA               AAATCATTCTTTCAG  67 448
        mprA 1114595 .. 1114618 -  -7.4  -3.85817   ACCTGTTGTCAGAAA          GGCCAGCA GTAACGCG TGCCGGCC           TGTCCGCTTTCCTGT  68 73
        emrA NONE
        emrB 1111783 .. 1111798 -    -9  -5.14563   TGGTCTACTAAAAAA              GGGATC CGCA GATCCC               TTTTATCAGATAGTT  93 39
NFH28_RS05325 1098849 .. 1098882 -  -6.7  -3.57144   CCGGCGAGCTGGAAA     CCTTCCTGCTCATGG CGCG CGATGAGCAAGACGA      TCCGCTCAATCTGAA  60 523
        srlA NONE
NFH28_RS05310 NONE
        srlB NONE
        srlD 1095310 .. 1095331 -    -3  -2.52896   CCATCCGGCAATTCA           CGGTCA GAACATCACT TGACCG            CCGGTTACGTTGATC  40 7
        gutM NONE
        srlR NONE
        gutQ 1092904 .. 1092931 -  -9.1  -2.64155   GGCGCTGGAAACCGA        CGTCGCCAACC TGCATC GGCTGGCGAAG         CGTCTGGGACTGAAG  66 43
        norV NONE
        norW 1088645 .. 1088657 -  -4.7  -3.30124   TCGTAGGCCGGATAA                GACGC GAA GCGGC                GCCATCCGGCATCAC  52 45
        hypA NONE
        hypB NONE
        hypC NONE
        hypD NONE
        hypE 1072746 .. 1072757 -  -7.2  -2.99325   GCCTGATAAGCAAAG                CGCC ATCA GGCG                 TTCATGCAGCGTTAA  60 99
        flhA 1070290 .. 1070330 -  -9.6  -4.72272   TTTGGCGAGGAAAAA  CCCGCCTGTAAGCAGTGC CCGGT GCACTGCTATCAGCCGGC  TAAACGCGAGGAGAT  95 229
        sitA NONE
        sitB NONE
        sitC NONE
        sitD 1066307 .. 1066319 -  -4.8   -4.2711   ACAAAAAGAATGAAA                CGCT TTATG AGCG                ATTCGATAACAATGC  66 221
        hilD 1057246 .. 1057278 - -11.3  -4.81163   TAAATATGAATAAAA      TGCCGGCCTTAATCC ACA GGGTTAAAGCCGGAA      GGAGATAGTGTCATC 100 296
        hilA NONE
        iagB 1054252 .. 1054285 - -12.7  -4.05669   AAGCTGATAAAAACA     TAGCTTACTTTTAGA ACTA TCTGAAAGTAAGCTA      TTTCTGTATAATTAT 100 37
        invH 1031311 .. 1031328 -    -7  -6.02919   TCACAAATAAAAAAA             GCAGCA GCGAGG TGCTGC              TGTATCAAAAAGCAG 100 179
NFH28_RS04970 NONE
NFH28_RS04965 1030165 .. 1030181 -  -2.3  -3.63054   GAAAGGTAGATACAA              CACATTA TTT TAATTTG              AAAAGTATATGAAAT  49 114
NFH28_RS04950 NONE
NFH28_RS04945 1027715 .. 1027732 -  -7.7  -3.34715   GATGTGCTTGAAAGA             TGCACGA TTTC TCGCGCA              ACACTTTATTGATTA  65 461
        pphB 1026501 .. 1026511 -  -6.8  -4.01902   ATATTGACGAAACAA                 GGCA AGC TGCC                 AGGCAATTAGTTCAG  68 401
        mutS 1023000 .. 1023017 -  -6.9  -3.34652   TGTCTAAACAATAGA             CAGGCGC TTCT GTGCCTG              AAAAAGGAAAGATCA  61 476
NFH28_RS04910 1020773 .. 1020810 - -10.6  -2.77416   AGGATTAAGACAGTA   TTATCC-GTCCGGGAGC GCAAT GCTCCCGGACTGGCTAC   GATGATGGGGCGTGC  74 22
        ygbI 1013708 .. 1013721 -  -9.5  -3.11459   AAGATGATGACGTAA               GCGGC TTGC GCCGC                TTCGCTATTGTTTGG  71 30
NFH28_RS04865 NONE
NFH28_RS04860 NONE
NFH28_RS04855 1010839 .. 1010858 - -13.6  -5.40072   CCCTTGTCAAAAAAA            GGCCAGTC TGTC GACTGGCC             TTTTTTTTACCGTTT 100 32
NFH28_RS04840 1008506 .. 1008521 -  -4.6  -3.34267   AAGCCGAAACGAATA              CCTGGA GTTT TCCTGG               TTATTCCCGGTGGGT  52 99
NFH28_RS04785  999676 ..  999699 -  -6.6  -4.60255   ACAAGGGCTGAAAAA          TGTTCCCCGC GCCA GCGGGGATAA           ACACGTTTCACCAGC  79 44
        sopD  987741 ..  987757 -  -9.4  -4.72272   TGCTGCTATGAAAAA              TCCGGC AGGCA GCCGGA              TTTTAAATTGGTTAT  91 55
        queD NONE
        barA  967379 ..  967393 -  -8.5  -3.30124   TTGTAGGCCGGATAA               GGCGG TCACG CCGCC               ATCCGGCGAATATCA  69 38
NFH28_RS04640  961613 ..  961632 - -10.7  -2.78679   TTTCCTGAGGTAAAT            CCCTCCC CCCTAC GGGAGGG             TACCTTTTCGTTTGC  74 148
        queF NONE
        ppnN  956442 ..  956468 - -13.7  -2.62425   AAGGAATGGGAGAAG         CGCCCGGCTGC TGGCG GCAACCGGGCA         TAAGCGTTAAGCGCA  86 32
        sdaC  954594 ..  954612 - -13.1  -3.61902   TTGTATCATAGAGAA             GCGCCGC GGTAA GCGGCGC             TAAAGGACTTAGCTG 100 34
        sdaB  953140 ..  953168 -  -7.5  -4.69053   CATCAGGCAACAAAA       GCCGGAT--GGCG GCGAG CGCCTTATCCGGC       TTACAGATCCTAAAA  82 52
         xni  952269 ..  952286 -  -5.5  -4.63932   CATCCGGCAACAAAA             CTACCGC GCCA GCCGTAG              CTGCTGTAAGTTTCC  74 8
        fucP NONE
        fucI  946602 ..  946616 -  -4.2  -3.94381   AGATAACTCCATAAA               CGCC GCCCGAT GGCG               CTACGCTTATCCGGC  57 96
        fucK NONE
        fucU  944712 ..  944730 - -13.1  -3.17212   CCATCATTCGATGAA             CGCCCGC GTCAT GCGGGCG             CACCGGCAAGAGATT  91 39
        fucR  943921 ..  943967 - -10.9  -4.88736   GACGAGCGATAAAAA CGCGTTGCCGTCGTCCGGCGC GTCATCA GCGCCGGATGAC-GC-ACGCT TATCCGGTCTACGAT 100 34
        csdA NONE
        csdE  938762 ..  938786 -  -3.6  -3.15788   CCCCATAATATAAAT         GCCAGTACCAC AAAC ATGGTACCG-C          TACGCAGATATTTTT  46 317
        rarD  937524 ..  937535 -  -2.2  -2.79327   CGATCCGACGCAAAT                CCAG GTCG CTGA                 TTTGGCGAAAACCAT  39 381
NFH28_RS04510 NONE
NFH28_RS04505  935412 ..  935425 -  -8.1  -5.77988   ACAGATACAAAAAAA               CACCC GTAA GGGTG                TTCATTAAGTTGGTT 100 36
        argA  932407 ..  932420 -  -4.5  -3.32963   AGTCGTACCGGATAA               GACGA GTTC TCGCC                GGATGGCGACGCGTA  52 114
        mutH  912463 ..  912482 -  -9.2  -2.91199   GAAGCGGTAATTATA            GGCCCGTC GAGT GACGGGCG             AAAGCCCAGGCTGAA  67 149
NFH28_RS04425  911678 ..  911706 -  -9.6  -2.82263   AAGGAAATAAAGTGA       GTATTCGCTCCCC GGCG GGGGAGCGAG-AC        AGGATTACAGCGGAT  69 30
NFH28_RS04420  911297 ..  911321 -  -3.5  -3.30159   TGAAGGCTTGCAGAA          CGCTGACCT CGATCAC AGGCCACCG          CTTAACGTTCGATGA  48 27
NFH28_RS04415  909708 ..  909725 -  -5.5  -2.78596   GATCTTCTCATTACA             GCACGCA TTGC TGCCTGC              TTATGCCTTGTTGCT  47 392
        galR NONE
NFH28_RS04395  903961 ..  903973 -  -3.3   -3.1634   CGTCAAACCATTGAA                GAGCT GTT AGCGC                TGGAGATGCTCTGAA  46 49
NFH28_RS04385  901225 ..  901251 -  -7.3  -2.57211   AGGCGGGCGCAGAAG         GCATTGTGCTG TGTAC CAACACCATGC         ATAAAATCGCGCACG  54 446
NFH28_RS04350  894197 ..  894219 -  -3.4  -4.62708   AACACACAAAAAGAA           GCGCAATTTA CCA TAAATAGCGT           CAGTTGGGGGCGTTT  66 107
NFH28_RS04345  892897 ..  892920 - -12.5  -4.53303   GATTCTTATATAAAA          TAGCCGGGA GTTATA TCCCGGCTA           TCTTTTACTTTAGCC 100 35
NFH28_RS04335  891533 ..  891550 -  -4.9  -3.84985   GAGTAAAATACAGAA             TTCAGGCG GGA CGC-TGAA             TGTATGGCCTTTCAT  59 117
NFH28_RS04280  881082 ..  881105 -  -4.5  -3.57144   TGCCTGATCGTCAAA          GCCAACATG CCCCTT CAGGCTGGC           TTATAAGTCAGAGTG  55 108
NFH28_RS04275  879816 ..  879846 -  -8.4  -3.30701   GGGGAGTAAACCGAA      GTGCTGAC-GGCGA ATTAA TCGCCAGTCAGC-C      AGTAAGTCTCTTGCC  69 286
         idi  878187 ..  878219 - -14.2  -3.82865   GAAATAAGATGTAAA     TTGCCGGATGG-GGC ATCA GCCGCCATCCGGCAT      CTCTTCGTTCAGGCG 100 60
        fldB  871390 ..  871413 - -12.4  -3.37245   TCAGGCCAACACTAA          CGGAACGGCG TAAA CGCGGTTCCG           TCGAGAGGGAAGTAC  90 54
        ygfZ  869446 ..  869483 -  -9.1  -2.81872   CCTACGAGAACAGCA   CGTGCGAGCCTGATGGCG TTG CGCTATCAGGCTATC-CG   GCTTTTAACGTGATA  66 41
        bglA  866623 ..  866648 - -13.3  -2.73007   AAGACTCGTTCAAAG         TGTTACCCGCC GACT GGCGGGTAACG          TGCAGGAGTTAAAGC  85 34
        zapA  855313 ..  855334 -  -8.1  -3.28791   ATTCTGTTTTCACAA           TCACTTTAC CATA GTAAAGCGA            AAAGTGTTATTCAAA  65 32
        ssrS  855114 ..  855134 -  -3.9  -3.35679   TGTCGCCAGTCAGAA            GGGGAATCT CCG AGATGCCGC            CGCAGGCTGTAACCC  50 7
NFH28_RS04145  854309 ..  854328 - -11.4  -3.71649   CGCTGAAACGGGAAA            GCCCCTAC CGAG GCAGGGGC             TCTAAAAAGGAAAGG  91 196
        argP  850511 ..  850527 -  -7.9  -3.84246   GTGCGAATGATGAAA              GCCGCAG ATG CTGCGCC              GGTATCTGCGCAGGA  68 412
NFH28_RS04095 NONE
NFH28_RS04090 NONE
NFH28_RS04085 NONE
NFH28_RS04080 NONE
NFH28_RS04075  841024 ..  841043 -   -15  -4.42619   TAATACGGCATAAAA            CGGGTCGC TTCG GCGACCCG             TTTTTTATTCTCCCT 100 30
NFH28_RS04065  837945 ..  837956 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTCA CGCC                 GCCATCCGGCACTGT  63 48
        metK  824486 ..  824504 - -12.4  -4.08546   ATCAGCAATGATAAA             GGCCAGCA GAG CGCTGGCC             TTGATAAGTACGGTA 100 80
        galP  822637 ..  822663 -   -21  -5.08601   GGACTGCAAGAAAAA         CGCTTCCTCCTG TGG CAGGAGGAAGCG         TGGAGGGATTAGTCG 100 34
NFH28_RS03990  822076 ..  822096 -  -9.7  -3.72695   AGTCCGCTCAGGAAA            GTTCCCGGA CGT TTCGGGAAC            TACCCGGCGACCAGT  79 25
        endA  821229 ..  821245 -  -3.5  -4.11512   GCATAATAAAAAAAT              CCGCGTC ATG GCCCCGG              CGTTTGGCTATCCAG  57 74
        rsmE NONE
        gshB  819384 ..  819406 - -10.6  -3.51924   TTGTCACTCATATAA           GCCGTCTTTT GCC AAAGGACGGC           TGCCTTATCGGGCAA  81 138
NFH28_RS03970 NONE
        ruvX  818259 ..  818283 -  -2.2    -3.794   GCTGAAGGCACTAAA         CCA-GCTTATT GCCC AGTAAGCCTGG          CAACCGTGACCGCGT  51 66
NFH28_RS03950 NONE
NFH28_RS03945 NONE
        yggU NONE
NFH28_RS03935 NONE
        hemW  813028 ..  813047 -  -2.9  -4.13561   GCGCTGGAAAAAAGA            TACGGACG ATTTG CGTC-GTA            AAGGGGTTATTAAAT  56 133
        mutY NONE
NFH28_RS03895 NONE
        mltC  805992 ..  806003 -  -5.8  -4.11751   ATGAATGTTTTAAAA                GGCA CATT TGCC                 GTTGTGATTTGGTGT  65 189
NFH28_RS03885  804633 ..  804684 - -14.7  -3.51708   TATGTTTTAAAGTAA CGTTGCCTGCAGGCCGGATAAGGCA TTTA CACCTTATCCGGCCTGC-GA-AACA GGGCAAGGATTAATG 100 35
NFH28_RS03875  801265 ..  801286 -  -3.8  -2.71364   CTATCCGGGCAACGA           GGCGCATTA AACCG TAAT-CGCC           TCGCTTCGTCAACGA  45 104
NFH28_RS03870  800792 ..  800812 -  -3.3  -2.95177   GCGCAAAAAATTAAC            CTCCATC AGCAAGA AATGGAG            TTCGAACCAAAAGCG  42 397
        ripR  796599 ..  796624 -    -7  -3.53811   GTGACCCCCTGGAAA         CGCATAATCT CGCAGC AAATTATGCG          GATAAAGTGAAAATA  60 268
NFH28_RS03830  792600 ..  792616 -  -7.2  -3.67402   ACAATGGGGAAAAGA              CCCGCA ATTGA CGCGGG              TTAAAAAGCACGCTT  67 41
NFH28_RS03805  786883 ..  786895 -  -7.7  -3.08312   AACGCAGCGAGCGAA                CCTGA TAA TCAGG                CAGACAGTCCACCTT  62 79
        uxuA  780061 ..  780085 - -16.5  -3.62275   ATTGAGTAGGGGAAA          TCGCATGACGC GTC GCGCCATGCGA          AAGAAGGTTATTTGC 100 33
NFH28_RS03770 NONE
        uxaC  776776 ..  776786 -  -3.2  -4.65263   ATTTGTTAAAAGAAA                 CCAC ACT GTGA                 AGTCATAAGTTATTA  66 325
        yghU  772069 ..  772101 -  -7.8  -2.76468   CAGCAGGGAATACCA     TGCCGGATGACGACA TTAC TACC-CCATCCGGCA      TTATGGTTTAACTTT  60 33
NFH28_RS03675 NONE
NFH28_RS03670  758868 ..  758885 -  -2.7  -2.91681   CTTTAAGCGTAGACA             CTTTTAC TACC GTAAGAG              GGAGAATCAGAACGA  42 89
NFH28_RS03665  757893 ..  757922 -  -6.3  -3.55444   TTTTTATTGCCTAAA       GTGGCGCCTTGCT TAAC AGAATTGCGCCAC        CTTAATCGACTTCAT  60 44
        metC  755172 ..  755200 -  -4.5  -4.20516   CCCGGACGCAACAAA        CGCAGACTTTTCC ACG GAAATTGTCTGCA        TATATGTCCATCCCC  64 48
NFH28_RS03645  754390 ..  754417 -  -5.6  -2.60392   CACGGGTCAACGAAG        CGTAACCGGGCCA TCC TGGCC-GATTATG        GATACGTCAGGCGTT  50 32
        yqhD NONE
        dkgA  751131 ..  751150 -   -15  -5.86332   GGAATGCAAAAAAAA            GCCCGACG ACAT CGTCGGGC             ATGGCGTGCGATAAA 100 47
NFH28_RS03620  748615 ..  748629 -  -7.2  -2.73334   ATTAATTATATATTA               CCTTAA TGA TTAAGG               CATGATGCTTGTATA  58 415
NFH28_RS03605  744796 ..  744814 - -12.4  -3.56821   ATTACATCCTGTAAA             GGGCAGGA GAA CCCTGCCC             GGCAGATTTACATAT  93 33
NFH28_RS03600 NONE
NFH28_RS03595  742914 ..  742928 -  -7.1  -2.73124   CTCGATTGGGCAAAT               GCTGG TGAAT CCAGC               GTCGTAAAGCGTCCG  58 77
        qseB NONE
        qseC  734570 ..  734594 -  -4.3  -3.67068   AGCAAAATGTGCAAA          GTCTTTTGC GTTTTTG GCAAAAGTC          TCTGTTACCAACTTA  55 30
NFH28_RS03555  733915 ..  733927 -  -4.1  -3.10894   AGGATGACCAGTTAA                GCAAA AAT TTCGC                TCAGATGCTTGCGAT  47 9
NFH28_RS03550  733502 ..  733546 -  -7.3  -2.64794   GCGAATCCGACATGA CGCCGCAGCCTGATGGCGACAC TTGC GCATCG-CATCAGG--GCGACG TCAGACGAGGGTAAT  57 44
        tolC  727292 ..  727349 - -22.9  -2.78384   CGCGGCTTTATGACA GGTAGCGCCGCGCTTACCAGACCTACA AGGG CACAGGTCTGATAAGCGCAGCGCCAGC GAATAACTTATCAAT 100 36
NFH28_RS03515 NONE
NFH28_RS03510  725267 ..  725296 -  -8.5  -2.71681   TAAGGCGCTGAATGA       TTGCCCGATG-GCG CTA CGCGCATCGGGCTT       ACAGGAGAATCTATC  64 36
        zupT  723283 ..  723296 -  -2.5  -3.61178   TTTAGTGATGTTAAA               TTTTA AGGG TAAAA                AGGATGTTTATTGCC  50 272
NFH28_RS03495 NONE
NFH28_RS03490 NONE
        dsbI  719676 ..  719701 - -15.5   -4.3898   ATTATTGTGAGAAAA         GCAGAGGCCTG AATG CAGACCTCTGC          TTTGGTTTATCTATT 100 45
        ubiK  718135 ..  718152 -  -8.3  -2.64243   TCAGATCTTATATGA             GCGGGCC GTCA GGCCCGT              TCACGTTTTTACTCT  63 34
NFH28_RS03465 NONE
NFH28_RS03460  715261 ..  715282 - -12.3   -5.9667   AAAAAGATAAAAAAA           TCCCCGGTC TTAT GACCAGGGA            CAGGAGATATGGCGG 100 45
NFH28_RS03455  714966 ..  714988 -  -9.1  -3.94051   AAAGTAAAGGAATAA           GGGTGAGAG GGGAT CTCTCCCCC           CCTCTGATTGTCTGT  79 25
NFH28_RS03435 NONE
NFH28_RS03430  706900 ..  706943 -  -6.6  -3.28712   TTGTCGGTCTGATAA GCGCAGCGCCATCAGGCA ATTTATCG TGCCGGATGGCGTTTAGC TGGCGGGGTTCGGGC  61 21
        plsY  704599 ..  704621 - -11.2  -3.97406   GTAAAAGCGGAGAAA           GGGGGCGACA TCA TGCCGCCCCA           ACGGGTTTACAGCAA  91 242
        rpsU  703055 ..  703081 - -10.9  -4.40882   CATAAACGAAAACAA        GCCGCGCATTCC TTTC GGAA-GCACGGC         CTTACAACTACAACT  90 75
        dnaG NONE
        rpoD  699116 ..  699133 - -14.1  -5.60993   GGCCTGATAAAAAAA             CGCCGCC TTGC GGCGGCG              TTTATACGTGTGCGG 100 45
NFH28_RS03375  698276 ..  698293 - -11.3  -5.30189   GATAATATCAAAAAA             GCCACTC TATA GAGTGGC              TTAATTATATGATTT 100 54
NFH28_RS03255 NONE
NFH28_RS03250 NONE
NFH28_RS03245  675586 ..  675610 -  -6.4  -4.24948   GCAGGAGACGCAAAA         CGAGCCAATGC AGGA GCTTTGGC-CG          GAATGGTTATGACGT  70 337
NFH28_RS03195 NONE
NFH28_RS03190  669336 ..  669346 -  -2.6  -2.59742   CCTAACTGGCATAAG                 TTAA CCA TTAA                 GAATACGTTGTTTCT  40 15
NFH28_RS03185 NONE
NFH28_RS03180  666299 ..  666318 -  -7.8  -5.38054   TGTCAGAAACAAAAA            GGCCACTC TTTA GAGTGGCT             TAATTATATGATTTT  95 231
NFH28_RS03170  664573 ..  664631 -  -5.3   -4.2349   GCGTTACATTTAAAA GAGCTGG-TTAA-CGTGTTCCGCGTCCGC GAA GAGGACACGCAGCCCGCTTAATCCAGTTC GGCGATTTCCAGCGC  65 14
        ygjG  659308 ..  659333 -  -8.3  -2.78211   ACCCGGGGAAAACAG         GCCGGATAAGCA CAG CGCC-ATCCGGC         ATCGTTTTTAAACCT  64 33
NFH28_RS03150  657072 ..  657122 - -13.5  -3.29144   GGACGCCGTCGATAA GGCGCTCAAG-CGTCATACCGGCCT ATA AAACCGGTATGACGGCGTAAGC-CC GATAAGCGTAGCGCC 100 55
NFH28_RS03140  655250 ..  655265 -  -3.2  -2.88427   AATACCCTCTACAGA              TCGTCA TCCT TGACGT               GGCGGCAGGCAATGA  44 112
NFH28_RS03135 NONE
NFH28_RS03130  653176 ..  653201 - -15.5  -6.79027   TGCAAAAAAAAAAAA         CGGCTAACGCC GAAT GGCATTAGCCG          TTGCTTTTATGCATA 100 245
NFH28_RS03125  652120 ..  652146 - -15.2  -5.28942   CATGTTAAACAAAAA         CGCCCGACAG GTGTGCG CTGTCGGGCG         TTTTTGACGGGGCAG 100 59
        sstT  650693 ..  650705 -  -6.2  -3.08133   CACTTAGCTACGCAA                GGCG TTATT CGCC                AGACGTTCGTCCTCT  56 1
NFH28_RS03115 NONE
        mzrA  649145 ..  649156 -  -4.4  -4.16371   CATTAAACAATGAAA                TCAC CAAA GTGA                 GTGATATGATTCGGA  64 51
NFH28_RS03105 NONE
NFH28_RS03100  648323 ..  648335 -  -4.1  -2.57683   AGAGTCCGCCATAAT                TAACG ACG CGTCA                GCAGTACGCCCAACA  44 12
NFH28_RS03095 NONE
NFH28_RS03090  647571 ..  647608 - -20.7  -4.45485   ACGATATGCATAAAA   GTATCGCGCCACCAGGT GATA ACCTGATGGCGCGATGC    TATAAAAGAAAAGAT 100 42
NFH28_RS03085  646952 ..  646971 -  -6.4  -4.50976   CTTCAGATGACAAAA            GCGAGG CGCTATTC CCTCGC             TTTTTTAATTGAGTA  76 49
NFH28_RS03080  645918 ..  645935 - -12.7  -3.73647   GGTATTTATTAATAA             GGCGTCC CGGA GGACGCC              TGAAATTAGCCAAAG 100 31
NFH28_RS03075  645435 ..  645449 - -12.8  -4.07568   CGCGGCGCTTTAAAA               GCGGCG CCG CGCCGC               CATCAGGAAAAACGT 100 28
NFH28_RS03065 NONE
NFH28_RS03060  643417 ..  643439 -    -9  -3.99374   GCGCATTAATAATAA           CGCCCCGGCA TGA CGTCGGGGCA           GCGTGTTGCCCGATG  79 109
        garD  625141 ..  625158 -  -7.7  -4.46493   TCAAACATATGAAAA             CATGGCC CTTA AGCCATG              TTTTGCGAGGCGCTT  82 52
NFH28_RS02980 NONE
        pfkB NONE
NFH28_RS02970 NONE
NFH28_RS02965  618755 ..  618778 -   -16  -4.72272   CTTTGTCATGAAAAA          CCGTACCCGC CGGA GCGGGCACGG           AGGAACAAATGAAGG 100 41
        gatZ NONE
        gatA  616851 ..  616869 -  -2.3  -3.80461   CAATTTATTATCAAA             CCTGGAC GCACT GCTCAGG             CTCAAGGATGGTTTC  51 2
        gatB NONE
NFH28_RS02945  615126 ..  615153 -    -4  -3.15427   AACATTCTCCAGGAA        GGTGAGGGGAGC GATT GCTCCCCTAAAA         TTAAGAGGCGATTTG  48 26
        gatD  614035 ..  614063 -  -4.5  -4.06903   AATTTCGAAAGGAAA        TGTGAGCCAGC GCAGGTT GCTGGCTCGTA        CCATCAGGAAAGTTG  61 29
NFH28_RS02935  612967 ..  612979 -  -6.3  -3.96148   CGCTGGCAGCAGAAA                TTCAC GGC GTGAA                GAAAAATGCGCTGTA  65 229
NFH28_RS02925 NONE
NFH28_RS02920 NONE
        diaA  609098 ..  609109 -  -4.4  -2.71731   TGTACTCCTTAATCA                TCCT GGTG AGGA                 AAAAGCGTGTTATCG  47 7
        dolP NONE
        yhbO  606774 ..  606790 -  -2.1  -3.90744   TGGCTGGCGAAACAA              CACGTGG TGA CCTGGTG              CGTACACCATGAGGG  52 390
NFH28_RS02890  606239 ..  606249 -  -2.4  -2.87211   ATCCGGCGTTATATA                 GCCG CTT CGGT                 TTTGAACTGGCCGCA  40 153
NFH28_RS02875 NONE
NFH28_RS02870  603192 ..  603219 -  -6.2  -4.42748   TGACGGCAAAAACAA        TGCCCGAT-GGCG CTG CGCTTATCGGGCC        TACGGGATCGCTATT  73 76
NFH28_RS02865  602041 ..  602077 -  -7.3  -5.42259   TTACTTCGAAAAAAA    TCGCCGATTGCCAAC CATCACC GTTGAAAATCGGCGT    TATAAAATCAGCCCA 100 33
NFH28_RS02855  600647 ..  600671 - -11.5  -2.79684   CCAGTAATTGAACGA          GCCGGATGA GCTGTTT TCATCCGGC          AATATTTCACAAGTC  77 53
        argG  585122 ..  585137 - -11.8  -5.29782   GATATTCACAAAAAA              GGCCGC TTTC GCGGCC               TGTTGCATCAACGAC 100 47
        yhbY  577544 ..  577558 - -12.8  -5.13137   TAAAGAAAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACGGAGA 100 118
        dacB  575254 ..  575273 - -16.4  -3.41587   GCCTACAAAAGCCAA            CGGGCCGC ATTT GCGGCCCG             TTTTATTATGTTCTT 100 90
        ispB  571113 ..  571128 -  -6.1  -2.79023   GAACGGCATTAACGA              TCGCG CTGCAC CGCGA               TGTGTGCGAGACCGA  53 3
        sfsB  570549 ..  570571 -  -9.1  -3.63515   CTGTACGCTGAACAA           CCCCCGC GAACGCGAT GCGGGGG           TTGTTTTACAGGCAC  75 41
NFH28_RS02670 NONE
        kdsD  563484 ..  563499 -  -4.6  -2.62616   TGAGTTTCTACACGA              CGCCTG CACG CAGGAG               ATCATGCATATGTAA  46 2
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB NONE
        rpoN NONE
         hpf  559217 ..  559243 -   -13  -3.92522   CGCTAACTGTACAAA         TGGCCCGTTGTG TCA CACAACAGGCCG         TCCTGCACTGGCTAA 100 53
        ptsN NONE
        rapZ NONE
         npr  557262 ..  557275 -  -2.5  -4.58283   CAAGTCCTGGAAAAA               TTTAT TCAC ATAAA                TTTAGTATGGACAAA  63 243
        yrbL  556432 ..  556443 -  -7.2  -3.30124   CCCGATTCGCTATAA                GGCG AATG CGCC                 TTCCGGCTATGTGCG  59 194
        gltB NONE
        gltD  544966 ..  545006 -   -11  -2.52519   TGAGGAGAGGAATAT CGGCTCCCCAGCCATCAGC CAAG GCAGTAAGC-GGGGAGCCG  GAAGGGTTACACTTC  74 32
NFH28_RS02580  543648 ..  543663 -  -3.2   -3.1811   GTTTCCAGAATAAAG              CAAACG TTTT CGTGTG               ATATTTTTTTTGATA  46 65
        codB NONE
NFH28_RS02570  540615 ..  540626 -  -7.2  -3.96327   AGGCCGCAGGAGAAA                GCGC CGGG GCGC                 TATGAATTGCAGGGC  71 465
        zapG  530121 ..  530139 - -11.7  -3.13082   GGAAAGATAGAGAGA             GGGCGCA AGCGA TGCGCCC             GATAAATTTCTTAAC  83 50
        degQ  528598 ..  528627 -  -7.9  -3.11192   CATACCATGAGTTAA       CCGGACATCA-CAT CGC AGGCTGATGCCCGG       TTTAAGACAGGATTA  62 38
        degS  527244 ..  527261 -    -7  -4.07568   TGGTCGCCTGGAAAA             GCGCAT CGCAGT ATGCGC              GTCAACAGGCGCAAC  70 241
        argR  516890 ..  516916 -   -13  -2.73099   GAGAGGACAAAAAGG         TGCCTCCGCCGT ACG ACGACGGAGGAA         GTGGGACTAAAGCTC  85 32
        yhcN NONE
      yhcN-B  515880 ..  515898 - -13.1  -5.47914   AAAAAGCATAAAAAA             GCCCCCG GCAGG CGGGGGC             AAGTCGTCGGGTTAG 100 52
        aaeR  511072 ..  511126 -  -8.1  -3.32844   GGCGGCACCGCATAA CTGTCCGC-CTTATCAGGCCTGTGGTG TGTGC CGCC-CAGGCCTGATAAGCGCAG-C-G CCATCAGGCAATGTC  65 93
NFH28_RS02360  497330 ..  497378 -  -7.6  -2.94099   CTTTTTCATCACAGA CTCCCGGTC-TACCCACCACAACA TGG CGT-GTAGTGAATATGACAGGGAG TGTGTCAATGTGTAA  59 83
        msrP NONE
        msrQ  495568 ..  495581 -  -4.5   -4.4078   TTCTGCGAACGAAAA               TCGCC GTTG GGCAA                TGTAAAGTCGCACAT  66 163
        accB  494845 ..  494872 -  -2.7  -3.09803   CAATTTTATCCAACA        TGTTCGCC-TCG TTACT CGATGACGACCA        GTGGCTCGTCAAATT  43 9
        accC  493460 ..  493476 - -10.8  -5.72622   CCCAGAAATAAAAAA              GGCCGG ATTCA CCGGCC              TTTTGAGATTAACGT 100 45
NFH28_RS02335 NONE
        panF NONE
        prmA  490782 ..  490801 - -11.4  -4.36914   GTTGTGTGGAGAAAA            GCGTGGCC GGGC GACCACGC             TGACAAGAATTATTT  93 35
        dusB NONE
         fis  488808 ..  488833 -  -8.2    -5.252   GATGCGTATAAAAAA         GGCGCTTCCC CATGCC GAGTAGCGCC          TTTTTAAACAAGCAG  91 55
        yhdJ NONE
NFH28_RS02305 NONE
NFH28_RS02300  485376 ..  485392 -  -5.1  -3.89756   ATGCCAAATGAACAA              CAGGC GGAAGAA GCCTG              AGATTATTTTGAGTT  61 29
NFH28_RS02290 NONE
NFH28_RS02285  480007 ..  480022 - -10.4  -4.58395   CGTACCGTTTAAAAA              GGCGTC CGAA GACGCC               TCTGTTTACCGGTTA  89 38
NFH28_RS02280  479552 ..  479568 - -15.1   -3.6959   ATATTATTACTGAAA              GCGCGGC ATT GCCGCGC              CTGCATGTATCATTT 100 35
NFH28_RS02240  472404 ..  472419 -  -4.7  -3.27476   AGGCGGAAGCATTAA              TCCTG GCCCAG CAGGA               AGATGATCACGGTTG  49 32
         def NONE
         fmt  467019 ..  467037 - -10.2  -5.54907   TGTATAAAATAAAAA             TGCCCGGT AAC ACCGGGCT             TATAAAGACGTGACC 100 42
        rsmB NONE
        trkA  464290 ..  464308 - -11.7  -4.90917   AAAGGGAATTAAAAA             GGGCGCT GAATG AGCGCCC             CTTAAATTAGAGGAA 100 32
        mscL  463704 ..  463755 - -14.6  -3.09933   CGGTAATCGAGGGAA CTGGGAGGCCAGTGGCAAGAAAGTG AAT CACTTTTTTACCACTGGCCTT-CTG CTTATTAAGAACGGT  91 30
        hopD  448076 ..  448090 -  -4.3  -3.65415   GCAATCACAAATTAA               GGTTA CCGAT TAACC               GTCTGGAAAGAAAAC  55 20
NFH28_RS01965  439308 ..  439322 -  -8.5  -5.60993   TCGGGCACAAAAAAA               GCGGG TTAAC CCCGC               TTTTTTTCGTCTCAA 100 37
NFH28_RS01940  433701 ..  433720 -  -2.1   -4.6635   AAATGGCGAATAAAA            TAGCCTA ATGGGA TAGGCTC             TTAGTCGTTCTGCAT  64 26
NFH28_RS01935  433167 ..  433178 -  -5.8  -4.95896   AGAAAGCGAGAAAAA                CCAG CAAG CTGG                 CGGTATTTACTTGTT  83 184
NFH28_RS01925 NONE
NFH28_RS01920 NONE
NFH28_RS01915  430353 ..  430363 -  -2.4  -3.02144   CGAGCGCCGGGAAGA                 CGCG CCG CGCC                 TGTTTACGCACATTA  42 285
         crp  429150 ..  429171 -    -8  -5.30616   CGATGCAAACAAAAA           TGGCGCAT GATAAA ACGCGCCA            TTCTGACGGAATTAA  91 37
NFH28_RS01900  426968 ..  426978 -  -8.2  -2.61216   CCATGAAGGAATGCA                 GCGC TTT GCGC                 AGGCGGTAGGGAAGG  56 94
        tsgA  422172 ..  422201 - -13.5   -2.8805   AGGAGGGGGGATAGA       GTGCCGGAGGGCG ATGT CGCCATCCGGCAA        GGATTATCAATGCGT  87 32
        nirB NONE
        nirD  419051 ..  419071 - -12.5  -5.72118   AAAAAATACAAAAAA            GGGGAGGCG TTG CGCCTCCCA            AAAATAATTAACCGC 100 33
        nirC NONE
        cysG  416592 ..  416608 -  -9.4  -4.65933   TAGTTGTAAAATAAA              GCCCTG AATAA CAGGGC              GTTATTTTAATTAAT  91 36
        bigA  410379 ..  410397 -   -16  -4.62069   GGCGCATCTGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTAGTGTT 100 57
NFH28_RS01835  409312 ..  409326 - -11.4  -5.42862   AGACCTGTAAAAAAA               CCGGGA AAA TCCCGG               TTTTTTTGTATCTGC 100 54
        mrcA  396230 ..  396243 -  -9.5  -5.66338   AAACACAATAAAAAA               GGCGC CGGA GCGCC                TTTTTTGATCAGAAC 100 34
        igaA  393096 ..  393130 -  -9.2  -3.18274   TCCAGGGTAACGCAA     TTTGCGCGACAGGGTA GCA TACCCTGTCGCACGGC     GGCGCTATCAGATGA  70 33
        yrfG NONE
        hslR NONE
        hslO  391007 ..  391050 -  -8.3  -2.91593   GATGGCGGCATAAAT GCCTTATCCGGCCTACGG AGCGGGATG CTGTAGGCCAGATAAG-C GAGCGCCATCAGGCA  65 65
        pckA  387198 ..  387223 - -13.4   -3.4799   ACAAAAGAGGCATAA         GAAAGGGAGG TATTAC CCTCCCTTTC          TTCTCAACGCCGGAT 100 74
        greB  384395 ..  384409 -  -3.4  -2.60032   TGGCTGGCAAAAATG               CCAGCC ATC AGCGGG               GGCTTAGGATTCTTC  42 46
NFH28_RS01715  381958 ..  381991 - -13.1  -4.14739   GGACGTATTGCAAAA     TCGCAGGCCGGATAA GAAG TAACCCGGCCTGCGT      ATTACCCGATTAGCG 100 35
        feoA  381343 ..  381355 -  -4.1  -3.14602   CTCACTGTATTAACA                GGAAA CCG CTTCC                ACTTCTATTAACGCC  48 7
        feoB NONE
        feoC  378667 ..  378696 - -15.1  -4.21462   AGGCATGACGCAAAA       TTGCCCGGCA-GCG TGA CGCGTACCGGGCAA       CATAACGCGGGATAA 100 80
NFH28_RS01695  377436 ..  377451 -  -4.6  -4.07568   TGGTGCCGCGTAAAA              TCGTGC CTTT GCTCGA               TACGTTATGGCCGCA  62 176
        gntX NONE
        nfuA  375396 ..  375422 - -12.3  -2.57132   GGTGGGGCTGACAAG        GCCCGACAGGCG CAAG CGCC-ATCGGGC         ATGGATGCGGGGAAA  81 44
        gntT  373627 ..  373658 - -20.4  -4.44667   GCCGCGAAGAAGAAA      TAATAAAGCCGGGG ATTT CCCCGGCTTTATTA       TGTTGAGAGCACGTA 100 115
        malT  365509 ..  365526 -  -4.1  -3.21465   AAGGGAAATTGAATA             TTCGGGA CAGT TCCAGAA              AGATGTAAAACGGGC  47 348
        rtcR  358644 ..  358664 -  -2.6  -3.60971   ACGCTAATGGCGAAA            GAGGAT TTTCGTATT ATCCTC            GCCGGCGGTGAACTC  47 364
        glpD  355188 ..  355205 - -12.7  -4.08767   GGTATGTGGCGAAAA             GGGCGGT ATAA ACCGCCC              CGGATTTTATTACGA 100 35
NFH28_RS01585 NONE
NFH28_RS01580  348440 ..  348461 -  -9.3  -4.11692   TATTGATCCTTAAAA           CAGGCGAGC CGTA GCCCGCCAG            GGATATTATTTAAGC  80 31
NFH28_RS01575  347483 ..  347512 -  -8.6  -5.27335   GTGCTGAAATAAAAA       GAC-ATAGCGGGC AAGAA GCCCGCTTTCGTC       ATCGCTTAAAGTCCC  95 31
NFH28_RS01535  335189 ..  335201 -  -3.3  -2.64155   TGTTCGGTAAATTTA                CCGGC GCG ACCGA                AGCGCAGACGTTAAA  42 36
        yhhY  329231 ..  329242 -  -4.4  -2.84126   TGATAAAGCTTAAAG                TGGT AATA ACCA                 TGAAATTCAGATGGT  48 132
NFH28_RS01500 NONE
NFH28_RS01495  327065 ..  327084 - -10.8  -4.41548   TTATATTTTATAAAA            GGAGTAAC TTTC GTTACTCC             ATTGTTTTTTATTTT  90 34
NFH28_RS01490 NONE
NFH28_RS01485  324830 ..  324841 -  -7.2  -4.37092   ACTGCGGGTAGAAAA                GGGC TTCA GCCC                 CGATACGCTAAAGTT  77 221
NFH28_RS01475  322605 ..  322638 - -14.5  -2.72991   GTATACCGTCAATCA     GCCCCAGCG-GGCGGC AGA GCTGCTGCGCTGGGGC     GTGGATTGTATCTGC  83 95
        panM NONE
NFH28_RS01405  311000 ..  311031 - -10.8  -3.06796   GGCTACGTTATTCAA      CCCCGGTCACTTAC TTAT GTAAGCTCCCGGGG       ATTTCATAACTTGCC  76 29
        rsmD NONE
NFH28_RS01370  303949 ..  303965 -  -6.5  -4.58283   CAACGGCGGGAAAAA              GCCGC TAATGAG GCGGC              GCCGTTACAGCAAAA  78 312
NFH28_RS01360  303057 ..  303076 - -12.2  -2.95223   TAACCGGAGGATACA            CTCTGGAG TCGA CTCCAGAG             TCAAGCGCTATTATT  80 40
        zntA  300779 ..  300801 - -14.8  -3.30007   AATATCGCGGGATAA           CCCGGCGACA CGA CGCCGCCGGG           CGGGAGAAGATTAGT 100 36
NFH28_RS01350  298946 ..  298956 -  -6.8   -3.2048   CGTAAAGCGCATTAA                 CTGC ACG GCAG                 ATACTATTCTGATTA  59 38
NFH28_RS01340 NONE
NFH28_RS01335  297190 ..  297217 - -14.1  -5.40072   TGGCGCTTAAAAAAA        CGGCCTCCGTC TGCACT GCCGGAGGCCG         CATCATCGTCGTAAA 100 43
NFH28_RS01325  294772 ..  294787 -  -3.2  -2.82623   CTTTTCCCAGAACGA              CCTGGT ACAT ATCAGG               ACCAACGTTGCCTAT  43 71
        acpT NONE
        nikR  293601 ..  293615 -  -2.8  -4.83615   TACGCTTCAGAAAAA               CGATTG GCA CAATGG               CGTAAACATTATTGC  68 120
        pitA  285332 ..  285353 - -13.7   -5.8187   CACTGAATAAAAAAA           GCGGGCCAG TTTC CTGACCCGC            TCGTATTAGATAAGC 100 134
        uspA  284052 ..  284069 - -10.5  -4.99043   GGGGGATAAACAAAA             CGCCCAC ATAA GCGGGCG              TTGTTGTTGATAGCC  93 121
        dtpB  282172 ..  282210 -  -3.8  -3.53012   CGCGTGGTGGTTAAA  CGTCCCGATTATGCGCC GCCGCT GGCGGATG-TCGCGACG   CCCAACGCCATCGTC  51 183
NFH28_RS01255 NONE
        gorA  275318 ..  275330 -  -2.6  -3.59979   TTCCCGCACCGGAAA                CGGC GTCGT ACCG                TTGGATAAAGGGCAG  47 201
NFH28_RS01220  268174 ..  268195 -  -5.9  -5.60689   GCAGACAATAAAAAA           TGGCTGA AAATTCAG TCAGCCA            TTTATGATGCGATTC  93 58
NFH28_RS01210  265511 ..  265525 -  -4.2  -4.64992   GGCAAAAAATAGAAA               GCGC GCCGGAT GCGC               TGGTCATGCTGGATA  71 489
NFH28_RS01200  263847 ..  263865 -  -2.2  -3.06515   GTGGATGCTGAAAAT             GCGGCTAC TCT GCGGCCTC             TTTAATGGTTTCCGT  42 11
        yhjD  262701 ..  262739 -  -5.3  -2.69151   TGGGTCTACACATCA  GTAGGCCGAATGACGACGC CGT GCGT-GCCATTCGG-CAGC  AAGCCGCAGACTAGC  48 36
NFH28_RS01190  261049 ..  261072 - -18.2  -2.66326   GTAACGTGAAACGTA          GCGCCGGATG ATGC CATCCGGCGC           CCTATTACAACGCCT 100 30
NFH28_RS01175  256874 ..  256899 -  -7.5  -2.92389   GAAGTGACGGAGACA         CCGGCGGCA CAGTAAGC TGCCGCCTG          TCGGCCCGGTAAGCG  59 68
        bcsE NONE
        bcsF NONE
        bcsG NONE
NFH28_RS25600 NONE
NFH28_RS25595 NONE
NFH28_RS01100  235100 ..  235116 -  -4.3  -4.32034   CGATCAGGATGAAAA              TCCGCAG AAA CCGCTGA              GTTAATTGCGTTTTA  66 131
NFH28_RS25565  230264 ..  230276 -  -6.3  -5.23765   GAAAGAAGATAAAAA                CATCA ACC TGATG                GAGCAGGCCGGTCTG  90 265
        trfA NONE
NFH28_RS01060  225053 ..  225071 - -14.6  -4.03204   GACCAAATTCAGAAA             CCCTGCTC AAT GAGCAGGG             TTTTTTTGTATCTGA 100 156
NFH28_RS25535 NONE
NFH28_RS25530 NONE
NFH28_RS25525 NONE
NFH28_RS25520 NONE
NFH28_RS25515 NONE
        trhB  220344 ..  220354 -  -2.4   -3.1876   AACGTGACGCAGCAA                 CTGG GCG CCTG                 GGGCTCGGTCTATTT  44 2
NFH28_RS25505  219812 ..  219831 -  -7.8  -2.64412   TCCAACCTCAAACAG            CGGCGACC TGAC GGTCACCA             TTAAAGAATCGGACG  59 35
        htdT NONE
        trhV NONE
         tag NONE
NFH28_RS25490 NONE
NFH28_RS01005  214582 ..  214621 -  -2.9  -3.34716   CCATCCGCTAAAAAC GGCCA-GCG-GCAAAATCG AAAT CTATTCTGCGCGCATTGCC  AGCTATGGTTATGCG  47 504
NFH28_RS00995  211786 ..  211808 -  -6.9  -4.54727   CTCCGTAAATCAAAA           GGTAAGCGC GGCAT GCGCCAACC           GGAACAGGCTTATTA  77 200
        ghrB NONE
NFH28_RS25485 NONE
NFH28_RS00980 NONE
NFH28_RS25480 NONE
        cspA  208756 ..  208775 - -11.4  -6.09888   TTGGAATAAAAAAAA            TCCCCGCC ATCA GGCAGGGA             TTCAAAATGCTGAGC 100 50
        cueP  207901 ..  207923 -    -7  -5.72622   GCCAGAAACAAAAAA           GAGCCCATGT ATT AAATGGACTC           TTTCGCTGATGCCTC 100 189
NFH28_RS25455  205093 ..  205103 -  -3.2  -3.30441   CATCATCGTTGAGAA                 GAAC CTC GCTC                 TTGATCTGCAAACGC  48 8
NFH28_RS25450  204050 ..  204071 -  -5.7  -3.57792   CTACCGATCCCGAAA           CTGATGCGC TGGG GCGCGTCTG            ACGTACACTTCGTGC  59 390
NFH28_RS25445 NONE
NFH28_RS25440 NONE
NFH28_RS25435  202482 ..  202493 -    -3  -3.02263   AGATGCGTGGTAATA                CTTT CCGT AAAG                 AGAGTTTTGTCTGCT  43 134
NFH28_RS00930 NONE
         rsp  198102 ..  198119 - -10.5  -3.14881   GAACTGCTTTACCAA             CCCGCGC TATG GCGCAGG              CGCCGCCACTAACCC  74 84
        trhF NONE
NFH28_RS00910 NONE
NFH28_RS25420  195760 ..  195786 -  -2.4  -3.99374   GCGTAGCAACAATAA        CCTGTTCG-GCA TGAAG TGCACGAA-AGG        GCGTTGTACCAATAC  54 129
        trhU NONE
NFH28_RS00900 NONE
        trhN NONE
        avtA  191053 ..  191071 -  -2.3   -3.3375   AGGAACAGCAGAATA            GCGCGGCG GTGA CGACG-GC             GGACTTTGTGCCGCG  45 423
        yiaK NONE
        trhI NONE
NFH28_RS00875  188346 ..  188356 -  -2.4   -4.4009   CTCTATTTTATAAAA                 CGTC TAT GGCG                 ACTTTTACGACTATT  59 7
NFH28_RS00870 NONE
NFH28_RS25395 NONE
NFH28_RS25390 NONE
        yiaM NONE
NFH28_RS25385 NONE
        yiaN NONE
NFH28_RS25380 NONE
NFH28_RS00855 NONE
NFH28_RS25375 NONE
NFH28_RS25370 NONE
NFH28_RS00850 NONE
        ulaD NONE
NFH28_RS00840 NONE
NFH28_RS25365 NONE
NFH28_RS25360 NONE
        araD  180774 ..  180786 -  -4.7  -2.89564   CCGCCATCTGACACA                GGCTG TGG CTGCC                GGCATTACTGCCCGT  48 30
NFH28_RS25355 NONE
NFH28_RS25350 NONE
NFH28_RS25345 NONE
NFH28_RS00825 NONE
NFH28_RS25340 NONE
NFH28_RS25335 NONE
NFH28_RS00815 NONE
NFH28_RS25330  174663 ..  174689 -    -8  -4.82901   GTTGCTTTATAAAAA         GCACATCAGG AAATGAA CCAGATGTGC         TTTTTATTTTTCTGG  86 124
NFH28_RS25325  173429 ..  173440 -  -4.4  -4.13014   TCTACACGCGCAAAA                TCAG CCCA CTGA                 CCATGCGTATGCCGG  62 245
NFH28_RS25320  173095 ..  173122 -  -4.9  -2.83403   TCGCGCTGACCAAAG        CCGAT-CGCG TGGACGAGG CGCGTATCGG        TGAAGTACGTGAAGA  49 24
NFH28_RS25315  172469 ..  172487 -  -2.2  -2.77344   CGATTCGCGAACAAG             CGCAGCGG TTA CAGGCGCG             GCTGGCGGCACGTTA  40 24
NFH28_RS25310  172191 ..  172227 -  -8.7  -3.40597   TGGCTTACCCAAAGA   GCCGATGCC-GCAGCA GCTCAT TGCCGCAGGCGTCAGC    CTGGTAAGCTTCTCC  69 19
NFH28_RS25305  171599 ..  171609 -  -8.2  -3.55203   AAAATGCGGCGCAAA                 GCGC GCT GCGC                 CCGGTGATTAACCTG  67 27
NFH28_RS25300 NONE
NFH28_RS25295 NONE
NFH28_RS25290 NONE
NFH28_RS25285 NONE
        mtlA  168112 ..  168132 -    -9  -3.17075   TTTCCCTCAACCTAA            CCCTCTCC ACAAG GGAGAGGA            TATCGCCTTCATATT  70 161
NFH28_RS25275 NONE
        mtlD NONE
        mtlR NONE
NFH28_RS25270 NONE
NFH28_RS00775  165306 ..  165316 -  -3.2  -4.59773   TTTCATCCTGAAAAA                 GCAG GGA CTAC                 CGTTAAAAATGAACT  67 149
NFH28_RS00770 NONE
        sadA  159788 ..  159810 - -16.4  -4.30448   AAAGGGAAGTGAAAA           GGCAATGGCA TTA TGCCATTGCC           TTTGATGTCGGGAGT 100 53
        lldP  157887 ..  157898 -  -2.2  -2.86271   TTGGCATCACAATCA                CGGA ATCA TCCA                 GGTTAAAACATAGGC  41 11
        lldR NONE
        lldD  155901 ..  155920 -  -4.8  -2.73268   AATAGCAGAAATTTA            CCGGGCTC TCAC GCGCCAGG             CGTTCAGGCGGCATC  49 29
        trmL  155206 ..  155224 -  -5.9  -2.88579   GTAAGCGTTGACAGA             CGCGCCA TTGGC CAGCGCG             CCGCTACGCTGTTGG  51 188
NFH28_RS00735  152774 ..  152792 - -11.7   -3.1352   CTGTAAGGTAAGAGA             GGCGGGA CGGAT TCCCGCC             AGTCGGGTTAAGGGC  83 33
NFH28_RS00730 NONE
NFH28_RS25200 NONE
NFH28_RS25195 NONE
NFH28_RS25190  149761 ..  149771 -  -2.4  -3.66178   GCCTGGAAGCGGAAA                 CGGG GCG CCTG                 TTGCAGGATGTCGCT  50 16
        terC NONE
        terD  148039 ..  148052 -  -2.4  -4.56775   AGCGCCCCGCAAAAA               TGCA TTCCAG TGCA                CGCTCTGGCTGTATT  61 45
NFH28_RS25175 NONE
        gpmM NONE
NFH28_RS25170 NONE
        envC NONE
NFH28_RS00690  143996 ..  144014 -  -4.5  -3.57144   GTCCGCAGCGCGAAA             GCAGCTT ATCAG ACGCTGC             TCTGGTCCTTCCGGC  55 95
NFH28_RS25150  143448 ..  143461 -  -3.7  -4.56597   GGTGCGTCCGAAAAA               CCGGG CACG CCTGG                CAATCTATTCCGACC  69 40
NFH28_RS25145 NONE
NFH28_RS25140  141229 ..  141258 -  -4.8  -3.29461   GAAGCGGGCGCAGAA       CTGCGCGATCGC TTGTGG GCGAACGCCCGG        CAGTTCCGTGAGCAG  54 16
NFH28_RS25135  140898 ..  140911 -  -8.1  -2.52464   GGTGTTCTCAATGGA               TGGCG TCAT CGCCA                ATCTGAAAGGCGTCT  59 96
NFH28_RS25130  140447 ..  140468 -  -2.9  -2.63102   AGCAGGCGGATATCA           CCGTGGC GGATGGAA GCCACGT            TATTAACTTTTGCGC  40 27
NFH28_RS25125 NONE
        rfaD NONE
NFH28_RS25120 NONE
        rfaF NONE
NFH28_RS25110 NONE
        rfaC NONE
        rfaL  135912 ..  135941 - -14.4  -4.21194   CCTGATGATGGAAAA       CGCGCTGATACC GTAATA AGTATCAGCGCG        TTTTTTTATCTATTT 100 31
NFH28_RS25095 NONE
NFH28_RS25090  133190 ..  133217 -  -3.6  -5.46698   TCCAAAAGTAAAAAA        TACTGAACGCTTT TTC AAATCGTT-AGTA        AAAGGAGATTACTAC  91 158
NFH28_RS25060 NONE
NFH28_RS25055  127546 ..  127566 -  -3.3  -5.08824   CCGCGACGGAAAAAA           TGC-TGCC GCATGA GGCACGCA            CCATAGATTTGGACA  76 6
        waaA NONE
        coaD  124323 ..  124336 -  -4.5  -4.48987   CTGTCAGAAGTAAAA               TGCCA GGCC CGGCA                AGGTAGGAAACTTAT  69 37
NFH28_RS25035  123536 ..  123546 -  -4.6  -3.66654   TACCCGAAGTTGAAA                 CCAG CCG CCGG                 GGTATTGAACCCCAT  55 19
NFH28_RS25030  122652 ..  122663 -    -3  -3.02881   GAGCCAAGTAAAGCA                GATA AACT TATC                 ACTGAGCGCGTGATA  43 3
NFH28_RS25025 NONE
NFH28_RS25020 NONE
       coaBC NONE
NFH28_RS25015 NONE
         dut NONE
NFH28_RS25010 NONE
        slmA  119408 ..  119424 -  -2.2  -3.36991   CATTACGCTGAAAGA              CCTGAT TGCCT ATCTGG              AAGAAAAACCTGATA  45 171
NFH28_RS00545 NONE
NFH28_RS24990  116570 ..  116586 -  -2.1  -4.30576   TGGCGACCATCAAAA              GCAGGTC AGC GCTCTGC              ATTACGAGCGGGTGG  60 9
NFH28_RS00535  115125 ..  115143 -  -8.8  -4.27465   GATAATTTAAAAGAA             CGGCGC CCTGGAC GCGCCG             CCGGTGAGTTATTTC  84 42
NFH28_RS00530  114246 ..  114273 -  -9.2   -2.8978   ATCTGCAGATCAAAG        CGCTGAGCAG ATGGCTGG CTGCTCAGCA         TATTCCCGGATTTGG  67 44
         gmk  111718 ..  111733 -  -3.3  -2.78816   TGACTGGGCATGATA              CTGAA AGTGGG TTCAG               TCTGCCAACAATTTG  43 22
        rpoZ  111383 ..  111393 -  -2.4  -2.83082   TCAAACAGATACAAG                 GGCG ACC CGCT                 TTGTGATTAACGACG  40 32
  aac(3)-IVa NONE
        spoT NONE
   aph(4)-Ia NONE
        trmH NONE
        recG  106323 ..  106343 -  -7.5  -3.06133   TAACCCGGCAGTTAA            CGTCGGAGA TGA TCCTCGACG            GGGTGCAGAAGGCGG  60 171
NFH28_RS24920  105004 ..  105020 -  -6.5  -3.05816   CCACGCCGGATGGAA              TGCCTGA CGA TCAGGCC              GTGCCGACAGCCTTT  56 452
        sul2 NONE
        xanP  102778 ..  102797 - -10.7  -2.63479   AAGAGCGTTACAGCA            GCGGCGA ATCGTG TCGCCGC             CGCAGGGTTTTTACG  74 36
NFH28_RS00480  100558 ..  100580 -  -4.8  -3.17146   GTGCGTGACAATACA           CTACTGGCGC TGG GCAACAATAG           CCAGAAGCCCGATTA  49 423
NFH28_RS24875 NONE
NFH28_RS00465   96728 ..   96738 -    -4  -2.96712   AGTCTTAATAATAAG                 CAAA TAC TTTG                 TCCCGAAATAGAGGA  46 68
NFH28_RS00455 NONE
NFH28_RS00450   94213 ..   94234 -  -2.9  -4.09685   TCCCACGTTCGAAAA           CATCCTGTT CCTT AACCGGAGG            TTGCGGATCGACGCC  58 43
NFH28_RS00440 NONE
NFH28_RS24855   92153 ..   92172 -  -8.6  -3.89822   CAGTCACTTCACAAA            TATCCGCC TCAG GGCAGATA             TCTTTAACCATTCAT  76 93
NFH28_RS00430 NONE
NFH28_RS24845 NONE
NFH28_RS24840 NONE
NFH28_RS24835 NONE
        misL NONE
        sul3   87567 ..   87578 -  -4.4  -4.29508   ACGGATATCAACAAA                GTCA CGCG TGAC                 GAAACACTGTCCGAT  66 190
NFH28_RS24820   86710 ..   86759 -    -6   -3.4072   TACGCTTTATCAGAA TATCTCCATTATTCGCC-GCGG ATTACGTA CCGTTGGCGAA-AATGAAGATA CGCTGATAATCACGG  59 76
NFH28_RS00410   84889 ..   84909 - -14.1  -4.43911   AAATGGCAAGTAAAA            TAGCCCCAT TAA ATGGGGCTA            TTTAGCCTCTTCAGG 100 48
       intI1   80046 ..   80062 -  -3.6  -3.17392   CATCTGGCAAGTTAA              CGCACG CTATT CCTGCG              CTGCTTGCCGAACCG  46 44
NFH28_RS24780 NONE
NFH28_RS00385   78375 ..   78402 -  -9.2  -2.71763   CGGATAACGAGATTA        TGCAGCATCGACG TAT CG-CGATGCTGGA        ACTGGTACAAAAGCA  66 480
        oqxA NONE
        oqxB   73729 ..   73747 -  -3.9  -2.99837   CGCCAAATATCAAAG            TGGATTGC TTCG GCAA-CCA             GAGTTTTGCCGCTGC  47 36
        umuD NONE
NFH28_RS00340 NONE
        umuC NONE
NFH28_RS00335 NONE
NFH28_RS24720 NONE
NFH28_RS00325 NONE
NFH28_RS00320   65919 ..   65947 -  -8.2  -3.34894   AATTCCCGTCAAACA        GCGCAGGAAG TTGTAGAGG CTTCCTGCAC        TCATGATCGTATGAA  65 69
NFH28_RS24700 NONE
NFH28_RS24695   64406 ..   64420 -  -3.5  -3.01791   ACGGGTGCTTTAATA               TCCCG GCGGG CAGGA               CAGTAAAAGTCATTG  45 122
NFH28_RS24660 NONE
NFH28_RS24655 NONE
NFH28_RS00240 NONE
NFH28_RS24650 NONE
        traD NONE
        tisB NONE
NFH28_RS24640 NONE
NFH28_RS00210 NONE
NFH28_RS24635 NONE
        emrD NONE
NFH28_RS24630   44433 ..   44451 -  -3.1   -5.0538   TGCGAGCTGAAAAAA             GCGCATA TTCCG TATGCGA             TAAACGCGGACACTC  76 24
NFH28_RS24625   43256 ..   43277 -  -4.3  -3.73224   GCATTTTGCAGTAAA           TTTGCCGGA TTCA TCCGGCATT            GGCTTCGATCGTTCT  55 465
        dsdX NONE
        dsdA   39612 ..   39652 -    -9  -3.30771   TCACAGGCCTGATAA GCGTAGCGCCATCAGGC GATGGCGT GCCGGATGGCGCTGC-C  GTCTTTCCGGCACTG  71 49
NFH28_RS24565 NONE
NFH28_RS24560 NONE
NFH28_RS00150 NONE
NFH28_RS24555   34440 ..   34469 - -10.7   -3.6707   ATGGAAGAGGTGAAA       GGGTTCCGTCAGC TATG GGTGACGGAAACC        GGGCGATAAATCAGG  83 6
NFH28_RS24550   34027 ..   34037 -  -5.4   -3.4052   CGGGAACCGAATCAA                 CGAT GCC ATCG                 CCGCCGTTGGGCGTA  56 189
NFH28_RS25810   32863 ..   32873 -  -8.2  -4.62069   TCTGGACCCGAAAAA                 CCGC GAT GCGG                 CGCTGGGCTACGCGG  87 53
NFH28_RS25805 NONE
NFH28_RS25800 NONE
NFH28_RS25795   31661 ..   31672 -  -7.2  -3.61178   GGCACTGACCGGAAA                GCCG GTGC CGGC                 GTTCCGCCTGGAATC  67 145
NFH28_RS25790   30947 ..   30967 -  -3.1  -4.66537   TGCTGGAAGATAAAA            TCATCGCCA TGA CGGCGGTGG            GGATGGCGATGGCCT  67 97
NFH28_RS25785   30407 ..   30436 -  -4.9  -3.05384   CTGGCGGTCACCGAA       CAGCGCGC-CGGCT TTA AGGCGTGGACGCTG       CTGCTGTCCATCTGC  51 187
NFH28_RS25780 NONE
NFH28_RS25775   29552 ..   29574 -  -4.1  -4.19238   GCCGGAAGTGGAAAA           GGCGATG CAGGAAAAC CACCGCC           GCCCGCAACGCGCTG  62 152
NFH28_RS25770 NONE
NFH28_RS25765 NONE
NFH28_RS25760 NONE
NFH28_RS25755   26984 ..   27026 -    -6  -4.56775   ACGGCGCCGGAAAAA CCACCCTGCTGCGCCTGC TGACCGG GCTGGCGCGCCCGGACGG CGGGGAGGTGTACTG  76 21
NFH28_RS25750 NONE
NFH28_RS25745   25701 ..   25716 -  -3.3   -3.1634   TGGCAAAGCAGCTAA              TGGAT TACGAT ATCCA               GCTCGGCTACAAGTC  46 15
NFH28_RS25740 NONE
NFH28_RS25735 NONE
NFH28_RS25730 NONE
        torR NONE
NFH28_RS25725   19892 ..   19912 -  -3.3  -3.04517   ATCGCGGTTTAAAAC           GCGGCCAT ATCCTG ATGGC-GC            TCAGCGATCAGATGG  45 18
       virB9 NONE
NFH28_RS25715 NONE
      virB11 NONE
        torS NONE
NFH28_RS25705 NONE
NFH28_RS25700 NONE
NFH28_RS25695 NONE
NFH28_RS25690 NONE
NFH28_RS25685   13621 ..   13638 -  -4.8  -2.52795   AATCCGTTGAACGCA             CCGC-GC AGCAG GCTGCGG             CATTTGTTAATGCGT  48 6
NFH28_RS25680 NONE
NFH28_RS25675 NONE
NFH28_RS25670   12005 ..   12025 -  -9.8  -3.76373   GCTGCAACAGTTAAA            TGTAGCGA TCAGC TCGCTACA            GCGAGCGGTATTTGA  79 27
NFH28_RS25665 NONE
         hha NONE
NFH28_RS25655 NONE
NFH28_RS00035 NONE
NFH28_RS24375 NONE
NFH28_RS00030 NONE
NFH28_RS24370 NONE
NFH28_RS24365 NONE
NFH28_RS25650 NONE
NFH28_RS25645 NONE
NFH28_RS00025 NONE
NFH28_RS24360 NONE
NFH28_RS25640 NONE
NFH28_RS24355    3558 ..    3575 -  -4.1  -3.56836   AAACGATTGCTGAAA             CAGCG TAATGCCG CGCTG              CGCCAGGTGAGTCGT  52 91
NFH28_RS25830 NONE
NFH28_RS25625    2836 ..    2856 -  -5.3  -3.60792   CGCTGAAGTGCGAAA            CCGTGCGCA TTA TGCTGACGG            ATTCCGTATCCAGCG  55 239
NFH28_RS25820     732 ..     742 -  -8.2  -3.88232   CTGCGCAGACAACAA                 CGGC GCA GCCG                 CAGCGCGTAGCGCCT  71 37
