locus-tag class description HF553_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HF553_RS00005 PF00308 Bacterial dnaA protein HF553_RS00005 PF11638 DnaA N-terminal domain HF553_RS00010 PF02767 DNA polymerase III beta subunit, central domain HF553_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HF553_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HF553_RS00015 PF02463 RecF/RecN/SMC N terminal domain HF553_RS00020 PF01751 Toprim domain HF553_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS00020 PF18053 DNA gyrase B subunit insert domain HF553_RS00020 PF00204 DNA gyrase B HF553_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus HF553_RS00025 PF03466 LysR substrate binding domain HF553_RS00025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS00030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HF553_RS00030 PF13378 Enolase C-terminal domain-like HF553_RS00035 PF07690 Major Facilitator Superfamily HF553_RS00045 PF07729 FCD domain HF553_RS00045 PF00392 Bacterial regulatory proteins, gntR family HF553_RS00050 PF05035 2-keto-3-deoxy-galactonokinase HF553_RS00055 PF01081 KDPG and KHG aldolase HF553_RS00060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HF553_RS00060 PF13378 Enolase C-terminal domain-like HF553_RS00065 PF07690 Major Facilitator Superfamily HF553_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS00070 PF00672 HAMP domain HF553_RS00070 PF00072 Response regulator receiver domain HF553_RS00070 PF01627 Hpt domain HF553_RS00070 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS00075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HF553_RS00080 PF00486 Transcriptional regulatory protein, C terminal HF553_RS00080 PF00072 Response regulator receiver domain HF553_RS00085 PF03264 NapC/NirT cytochrome c family, N-terminal region HF553_RS00090 PF01568 Molydopterin dinucleotide binding domain HF553_RS00090 PF18364 Molybdopterin oxidoreductase N-terminal domain HF553_RS00090 PF00384 Molybdopterin oxidoreductase HF553_RS00095 PF02613 Nitrate reductase delta subunit HF553_RS00100 PF14376 Haem-binding domain HF553_RS00100 PF03150 Di-haem cytochrome c peroxidase HF553_RS00100 PF00034 Cytochrome c HF553_RS00105 PF00005 ABC transporter HF553_RS00110 PF03379 CcmB protein HF553_RS00115 PF01578 Cytochrome C assembly protein HF553_RS00120 PF04995 Heme exporter protein D (CcmD) HF553_RS00125 PF03100 CcmE HF553_RS00130 PF01578 Cytochrome C assembly protein HF553_RS00130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HF553_RS00135 PF08534 Redoxin HF553_RS00140 PF03918 Cytochrome C biogenesis protein HF553_RS00145 PF07676 WD40-like Beta Propeller Repeat HF553_RS00145 PF12566 Protein of unknown function (DUF3748) HF553_RS00150 PF07119 Protein of unknown function (DUF1375) HF553_RS00155 PF00011 Hsp20/alpha crystallin family HF553_RS00160 PF00011 Hsp20/alpha crystallin family HF553_RS00165 PF02080 TrkA-C domain HF553_RS00165 PF06826 Predicted Permease Membrane Region HF553_RS00170 PF02656 Domain of unknown function (DUF202) HF553_RS00175 PF02656 Domain of unknown function (DUF202) HF553_RS00185 PF00291 Pyridoxal-phosphate dependent enzyme HF553_RS00190 PF02447 GntP family permease HF553_RS00195 PF03466 LysR substrate binding domain HF553_RS00195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS00205 PF07690 Major Facilitator Superfamily HF553_RS00215 PF13939 Toxin TisB, type I toxin-antitoxin system HF553_RS00225 PF08049 IlvB leader peptide HF553_RS00230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF553_RS00230 PF00205 Thiamine pyrophosphate enzyme, central domain HF553_RS00230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF553_RS00235 PF01842 ACT domain HF553_RS00240 PF00455 DeoR C terminal sensor domain HF553_RS00240 PF08220 DeoR-like helix-turn-helix domain HF553_RS00245 PF00294 pfkB family carbohydrate kinase HF553_RS00250 PF07690 Major Facilitator Superfamily HF553_RS00260 PF00072 Response regulator receiver domain HF553_RS00260 PF00196 Bacterial regulatory proteins, luxR family HF553_RS00265 PF07730 Histidine kinase HF553_RS00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS00265 PF05231 MASE1 HF553_RS00270 PF07690 Major Facilitator Superfamily HF553_RS00275 PF07690 Major Facilitator Superfamily HF553_RS00280 PF06711 Protein of unknown function (DUF1198) HF553_RS00285 PF00392 Bacterial regulatory proteins, gntR family HF553_RS00285 PF07702 UTRA domain HF553_RS00290 PF08279 HTH domain HF553_RS00290 PF05043 Mga helix-turn-helix domain HF553_RS00290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HF553_RS00290 PF00874 PRD domain HF553_RS00295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HF553_RS00300 PF03611 PTS system sugar-specific permease component HF553_RS00310 PF01116 Fructose-bisphosphate aldolase class-II HF553_RS00330 PF07690 Major Facilitator Superfamily HF553_RS00335 PF00232 Glycosyl hydrolase family 1 HF553_RS00345 PF00158 Sigma-54 interaction domain HF553_RS00345 PF00874 PRD domain HF553_RS00355 PF03610 PTS system fructose IIA component HF553_RS00355 PF03830 PTS system sorbose subfamily IIB component HF553_RS00360 PF03609 PTS system sorbose-specific iic component HF553_RS00365 PF03613 PTS system mannose/fructose/sorbose family IID component HF553_RS00370 PF03841 L-seryl-tRNA selenium transferase HF553_RS00375 PF07071 KDGP aldolase HF553_RS00380 PF04754 Putative transposase, YhgA-like HF553_RS00385 PF00892 EamA-like transporter family HF553_RS00390 PF02308 MgtC family HF553_RS00395 PF00690 Cation transporter/ATPase, N-terminus HF553_RS00395 PF00689 Cation transporting ATPase, C-terminus HF553_RS00410 PF00857 Isochorismatase family HF553_RS00420 PF00486 Transcriptional regulatory protein, C terminal HF553_RS00430 PF03797 Autotransporter beta-domain HF553_RS00435 PF00196 Bacterial regulatory proteins, luxR family HF553_RS00455 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system HF553_RS00485 PF06755 CbtA_toxin of type IV toxin-antitoxin system HF553_RS00490 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HF553_RS00495 PF06174 Protein of unknown function (DUF987) HF553_RS00500 PF04002 RadC-like JAB domain HF553_RS00505 PF03230 Antirestriction protein HF553_RS00510 PF06067 Domain of unknown function (DUF932) HF553_RS00515 PF06006 Bacterial protein of unknown function (DUF905) HF553_RS00530 PF13018 Extended Signal Peptide of Type V secretion system HF553_RS00530 PF03797 Autotransporter beta-domain HF553_RS00530 PF16168 Adhesin of bacterial autotransporter system, probable stalk HF553_RS00590 PF00271 Helicase conserved C-terminal domain HF553_RS00590 PF00176 SNF2 family N-terminal domain HF553_RS00605 PF01555 DNA methylase HF553_RS00625 PF00589 Phage integrase family HF553_RS00625 PF13356 Arm DNA-binding domain HF553_RS00625 PF14659 Phage integrase, N-terminal SAM-like domain HF553_RS00640 PF01055 Glycosyl hydrolases family 31 HF553_RS00640 PF13802 Galactose mutarotase-like HF553_RS00645 PF05170 AsmA family HF553_RS00650 PF00860 Permease family HF553_RS00655 PF03616 Sodium/glutamate symporter HF553_RS00660 PF00270 DEAD/DEAH box helicase HF553_RS00660 PF00271 Helicase conserved C-terminal domain HF553_RS00660 PF17191 RecG wedge domain HF553_RS00665 PF12105 SpoU, rRNA methylase, C-terminal HF553_RS00665 PF00588 SpoU rRNA Methylase family HF553_RS00670 PF04607 Region found in RelA / SpoT proteins HF553_RS00670 PF13291 ACT domain HF553_RS00670 PF02824 TGS domain HF553_RS00675 PF01192 RNA polymerase Rpb6 HF553_RS00680 PF00625 Guanylate kinase HF553_RS00685 PF03120 NAD-dependent DNA ligase OB-fold domain HF553_RS00685 PF01653 NAD-dependent DNA ligase adenylation domain HF553_RS00690 PF03458 UPF0126 domain HF553_RS00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS00700 PF03466 LysR substrate binding domain HF553_RS00705 PF03755 YicC-like family, N-terminal region HF553_RS00705 PF08340 Domain of unknown function (DUF1732) HF553_RS00710 PF03725 3' exoribonuclease family, domain 2 HF553_RS00710 PF01138 3' exoribonuclease family, domain 1 HF553_RS00715 PF00156 Phosphoribosyl transferase domain HF553_RS00720 PF00440 Bacterial regulatory proteins, tetR family HF553_RS00725 PF00692 dUTPase HF553_RS00730 PF04127 DNA / pantothenate metabolism flavoprotein HF553_RS00730 PF02441 Flavoprotein HF553_RS00735 PF04002 RadC-like JAB domain HF553_RS00740 PF00830 Ribosomal L28 family HF553_RS00745 PF00471 Ribosomal protein L33 HF553_RS00750 PF06827 Zinc finger found in FPG and IleRS HF553_RS00750 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HF553_RS00750 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HF553_RS00755 PF01467 Cytidylyltransferase-like HF553_RS00760 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HF553_RS00765 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HF553_RS00770 PF13439 Glycosyltransferase Family 4 HF553_RS00770 PF00534 Glycosyl transferases group 1 HF553_RS00780 PF07922 Glycosyltransferase family 52 HF553_RS00785 PF13439 Glycosyltransferase Family 4 HF553_RS00785 PF00534 Glycosyl transferases group 1 HF553_RS00790 PF01501 Glycosyl transferase family 8 HF553_RS00790 PF08437 Glycosyl transferase family 8 C-terminal HF553_RS00795 PF01501 Glycosyl transferase family 8 HF553_RS00795 PF08437 Glycosyl transferase family 8 C-terminal HF553_RS00800 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) HF553_RS00810 PF00534 Glycosyl transferases group 1 HF553_RS00815 PF04932 O-Antigen ligase HF553_RS00820 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HF553_RS00825 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HF553_RS00830 PF01370 NAD dependent epimerase/dehydratase family HF553_RS00835 PF00155 Aminotransferase class I and II HF553_RS00840 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS00840 PF00107 Zinc-binding dehydrogenase HF553_RS00845 PF00535 Glycosyl transferase family 2 HF553_RS00850 PF04748 Divergent polysaccharide deacetylase HF553_RS00855 PF01551 Peptidase family M23 HF553_RS00860 PF01676 Metalloenzyme superfamily HF553_RS00860 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HF553_RS00865 PF00581 Rhodanese-like domain HF553_RS00870 PF00462 Glutaredoxin HF553_RS00875 PF02556 Preprotein translocase subunit SecB HF553_RS00880 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HF553_RS00880 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HF553_RS00885 PF06426 Serine acetyltransferase, N-terminal HF553_RS00885 PF00132 Bacterial transferase hexapeptide (six repeats) HF553_RS00890 PF07690 Major Facilitator Superfamily HF553_RS00895 PF13378 Enolase C-terminal domain-like HF553_RS00895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HF553_RS00900 PF00356 Bacterial regulatory proteins, lacI family HF553_RS00905 PF00588 SpoU rRNA Methylase family HF553_RS00910 PF01070 FMN-dependent dehydrogenase HF553_RS00915 PF00392 Bacterial regulatory proteins, gntR family HF553_RS00915 PF07729 FCD domain HF553_RS00920 PF02652 L-lactate permease HF553_RS00925 PF13018 Extended Signal Peptide of Type V secretion system HF553_RS00925 PF05658 Head domain of trimeric autotransporter adhesin HF553_RS00925 PF05662 Coiled stalk of trimeric autotransporter adhesin HF553_RS00925 PF03895 YadA-like membrane anchor domain HF553_RS00930 PF11622 Protein of unknown function (DUF3251) HF553_RS00935 PF10928 Protein of unknown function (DUF2810) HF553_RS00945 PF05068 Mannitol repressor HF553_RS00950 PF08125 Mannitol dehydrogenase C-terminal domain HF553_RS00950 PF01232 Mannitol dehydrogenase Rossmann domain HF553_RS00955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HF553_RS00955 PF02378 Phosphotransferase system, EIIC HF553_RS00955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HF553_RS00960 PF13417 Glutathione S-transferase, N-terminal domain HF553_RS00960 PF00043 Glutathione S-transferase, C-terminal domain HF553_RS00965 PF03841 L-seryl-tRNA selenium transferase HF553_RS00965 PF12390 Selenocysteine synthase N terminal HF553_RS00970 PF00009 Elongation factor Tu GTP binding domain HF553_RS00970 PF09107 Elongation factor SelB, winged helix HF553_RS00970 PF03144 Elongation factor Tu domain 2 HF553_RS00970 PF09106 Elongation factor SelB, winged helix HF553_RS00975 PF00480 ROK family HF553_RS00980 PF00171 Aldehyde dehydrogenase family HF553_RS00985 PF07944 Beta-L-arabinofuranosidase, GH127 HF553_RS00995 PF00596 Class II Aldolase and Adducin N-terminal domain HF553_RS01000 PF01261 Xylose isomerase-like TIM barrel HF553_RS01005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HF553_RS01010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HF553_RS01010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HF553_RS01015 PF03480 Bacterial extracellular solute-binding protein, family 7 HF553_RS01020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HF553_RS01025 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HF553_RS01030 PF16154 Domain of unknown function (DUF4862) HF553_RS01035 PF04074 YhcH/YjgK/YiaL HF553_RS01040 PF02615 Malate/L-lactate dehydrogenase HF553_RS01045 PF09339 IclR helix-turn-helix domain HF553_RS01045 PF01614 Bacterial transcriptional regulator HF553_RS01050 PF13247 4Fe-4S dicluster domain HF553_RS01055 PF00155 Aminotransferase class I and II HF553_RS01060 PF00128 Alpha amylase, catalytic domain HF553_RS01065 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HF553_RS01070 PF12833 Helix-turn-helix domain HF553_RS01080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HF553_RS01080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HF553_RS01085 PF05360 yiaA/B two helix domain HF553_RS01090 PF01757 Acyltransferase family HF553_RS01095 PF13983 YsaB-like lipoprotein HF553_RS01100 PF02091 Glycyl-tRNA synthetase alpha subunit HF553_RS01105 PF05746 DALR anticodon binding domain HF553_RS01105 PF02092 Glycyl-tRNA synthetase beta subunit HF553_RS01110 PF01797 Transposase IS200 like HF553_RS01120 PF00313 'Cold-shock' DNA-binding domain HF553_RS01125 PF01381 Helix-turn-helix HF553_RS01130 PF11254 Protein of unknown function (DUF3053) HF553_RS01135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF553_RS01135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF553_RS01140 PF13488 Glycine zipper HF553_RS01140 PF00691 OmpA family HF553_RS01145 PF01568 Molydopterin dinucleotide binding domain HF553_RS01145 PF18364 Molybdopterin oxidoreductase N-terminal domain HF553_RS01145 PF00384 Molybdopterin oxidoreductase HF553_RS01150 PF00583 Acetyltransferase (GNAT) family HF553_RS01155 PF03352 Methyladenine glycosylase HF553_RS01160 PF03797 Autotransporter beta-domain HF553_RS01165 PF00884 Sulfatase HF553_RS01165 PF08019 Phosphoethanolamine transferase EptA/EptB HF553_RS01180 PF01797 Transposase IS200 like HF553_RS01190 PF00356 Bacterial regulatory proteins, lacI family HF553_RS01200 PF00860 Permease family HF553_RS01205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF553_RS01210 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS01215 PF12911 N-terminal TM domain of oligopeptide transport permease C HF553_RS01215 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS01220 PF00005 ABC transporter HF553_RS01220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF553_RS01225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF553_RS01225 PF00005 ABC transporter HF553_RS01230 PF03222 Tryptophan/tyrosine permease family HF553_RS01240 PF13940 Toxin Ldr, type I toxin-antitoxin system HF553_RS01245 PF11658 Cellulose biosynthesis protein BcsG HF553_RS01250 PF11120 Cellulose biosynthesis protein BcsF HF553_RS01255 PF10995 Cellulose biosynthesis GIL HF553_RS01260 PF10945 Cellulose biosynthesis protein BcsR HF553_RS01265 PF06564 Cellulose biosynthesis protein BcsQ HF553_RS01270 PF07238 PilZ domain HF553_RS01270 PF00535 Glycosyl transferase family 2 HF553_RS01275 PF03170 Bacterial cellulose synthase subunit HF553_RS01280 PF01270 Glycosyl hydrolases family 8 HF553_RS01285 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) HF553_RS01285 PF13176 Tetratricopeptide repeat HF553_RS01290 PF00672 HAMP domain HF553_RS01290 PF00990 Diguanylate cyclase, GGDEF domain HF553_RS01290 PF17154 Gammaproteobacterial periplasmic sensor domain HF553_RS01290 PF00563 EAL domain HF553_RS01295 PF00375 Sodium:dicarboxylate symporter family HF553_RS01300 PF00675 Insulinase (Peptidase family M16) HF553_RS01300 PF05193 Peptidase M16 inactive domain HF553_RS01305 PF00294 pfkB family carbohydrate kinase HF553_RS01310 PF00563 EAL domain HF553_RS01315 PF05170 AsmA family HF553_RS01320 PF07690 Major Facilitator Superfamily HF553_RS01320 PF00083 Sugar (and other) transporter HF553_RS01325 PF03631 Virulence factor BrkB HF553_RS01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS01330 PF03466 LysR substrate binding domain HF553_RS01335 PF00196 Bacterial regulatory proteins, luxR family HF553_RS01350 PF01204 Trehalase HF553_RS01355 PF00392 Bacterial regulatory proteins, gntR family HF553_RS01355 PF07702 UTRA domain HF553_RS01360 PF01380 SIS domain HF553_RS01365 PF00294 pfkB family carbohydrate kinase HF553_RS01370 PF03605 Anaerobic c4-dicarboxylate membrane transporter HF553_RS01375 PF00710 Asparaginase, N-terminal HF553_RS01375 PF17763 Glutaminase/Asparaginase C-terminal domain HF553_RS01380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HF553_RS01380 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS01385 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HF553_RS01390 PF01569 PAP2 superfamily HF553_RS01395 PF01432 Peptidase family M3 HF553_RS01400 PF04445 Putative SAM-dependent methyltransferase HF553_RS01405 PF00854 POT family HF553_RS01410 PF00582 Universal stress protein family HF553_RS01415 PF10625 Universal stress protein B (UspB) HF553_RS01420 PF01384 Phosphate transporter family HF553_RS01430 PF13533 Biotin-lipoyl like HF553_RS01435 PF00005 ABC transporter HF553_RS01445 PF08753 NikR C terminal nickel binding domain HF553_RS01445 PF01402 Ribbon-helix-helix protein, copG family HF553_RS01450 PF01648 4'-phosphopantetheinyl transferase superfamily HF553_RS01455 PF01594 AI-2E family transporter HF553_RS01460 PF07690 Major Facilitator Superfamily HF553_RS01465 PF08786 DcrB HF553_RS01470 PF02592 Putative vitamin uptake transporter HF553_RS01475 PF01206 Sulfurtransferase TusA HF553_RS01480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF553_RS01480 PF00672 HAMP domain HF553_RS01480 PF02203 Tar ligand binding domain homologue HF553_RS01485 PF00403 Heavy-metal-associated domain HF553_RS01490 PF07947 YhhN family HF553_RS01495 PF10694 Protein of unknown function (DUF2500) HF553_RS01500 PF06611 Protein of unknown function (DUF1145) HF553_RS01510 PF00448 SRP54-type protein, GTPase domain HF553_RS01510 PF02881 SRP54-type protein, helical bundle domain HF553_RS01515 PF00005 ABC transporter HF553_RS01520 PF18075 FtsX extracellular domain HF553_RS01520 PF02687 FtsX-like permease family HF553_RS01525 PF04545 Sigma-70, region 4 HF553_RS01525 PF04542 Sigma-70 region 2 HF553_RS01530 PF13458 Periplasmic binding protein HF553_RS01540 PF12568 Acetyltransferase (GNAT) domain, PanZ HF553_RS01545 PF13458 Periplasmic binding protein HF553_RS01550 PF02653 Branched-chain amino acid transport system / permease component HF553_RS01555 PF02653 Branched-chain amino acid transport system / permease component HF553_RS01555 PF11862 Domain of unknown function (DUF3382) HF553_RS01560 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF553_RS01560 PF00005 ABC transporter HF553_RS01565 PF00005 ABC transporter HF553_RS01575 PF13416 Bacterial extracellular solute-binding protein HF553_RS01580 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS01585 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS01590 PF17912 MalK OB fold domain HF553_RS01590 PF00005 ABC transporter HF553_RS01595 PF03009 Glycerophosphoryl diester phosphodiesterase family HF553_RS01600 PF10956 Protein of unknown function (DUF2756) HF553_RS01610 PF02126 Phosphotriesterase family HF553_RS01625 PF00294 pfkB family carbohydrate kinase HF553_RS01630 PF00583 Acetyltransferase (GNAT) family HF553_RS01635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HF553_RS01635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HF553_RS01640 PF17954 Quercetinase C-terminal cupin domain HF553_RS01640 PF02678 Pirin HF553_RS01645 PF00356 Bacterial regulatory proteins, lacI family HF553_RS01645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HF553_RS01650 PF01202 Shikimate kinase HF553_RS01655 PF02447 GntP family permease HF553_RS01665 PF02774 Semialdehyde dehydrogenase, dimerisation domain HF553_RS01665 PF01118 Semialdehyde dehydrogenase, NAD binding domain HF553_RS01670 PF00128 Alpha amylase, catalytic domain HF553_RS01670 PF02806 Alpha amylase, C-terminal all-beta domain HF553_RS01670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HF553_RS01675 PF00128 Alpha amylase, catalytic domain HF553_RS01675 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HF553_RS01675 PF18390 Glycogen debranching enzyme C-terminal domain HF553_RS01680 PF00483 Nucleotidyl transferase HF553_RS01685 PF08323 Starch synthase catalytic domain HF553_RS01685 PF00534 Glycosyl transferases group 1 HF553_RS01690 PF00343 Carbohydrate phosphorylase HF553_RS01695 PF01614 Bacterial transcriptional regulator HF553_RS01695 PF09339 IclR helix-turn-helix domain HF553_RS01700 PF00701 Dihydrodipicolinate synthetase family HF553_RS01705 PF00920 Dehydratase family HF553_RS01710 PF07690 Major Facilitator Superfamily HF553_RS01715 PF00465 Iron-containing alcohol dehydrogenase HF553_RS01730 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HF553_RS01730 PF01266 FAD dependent oxidoreductase HF553_RS01735 PF00581 Rhodanese-like domain HF553_RS01740 PF01694 Rhomboid family HF553_RS01740 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HF553_RS01745 PF00455 DeoR C terminal sensor domain HF553_RS01745 PF08220 DeoR-like helix-turn-helix domain HF553_RS01750 PF00196 Bacterial regulatory proteins, luxR family HF553_RS01750 PF17874 MalT-like TPR region HF553_RS01755 PF00343 Carbohydrate phosphorylase HF553_RS01760 PF02446 4-alpha-glucanotransferase HF553_RS01765 PF02447 GntP family permease HF553_RS01770 PF01521 Iron-sulphur cluster biosynthesis HF553_RS01770 PF01106 NifU-like domain HF553_RS01775 PF00156 Phosphoribosyl transferase domain HF553_RS01780 PF00561 alpha/beta hydrolase fold HF553_RS01785 PF04754 Putative transposase, YhgA-like HF553_RS01790 PF09012 FeoC like transcriptional regulator HF553_RS01795 PF07664 Ferrous iron transport protein B C terminus HF553_RS01795 PF17910 FeoB cytosolic helical domain HF553_RS01795 PF02421 Ferrous iron transport protein B HF553_RS01795 PF07670 Nucleoside recognition HF553_RS01800 PF04023 FeoA domain HF553_RS01805 PF17674 HHH domain HF553_RS01805 PF09371 Tex-like protein N-terminal domain HF553_RS01805 PF16921 Tex protein YqgF-like domain HF553_RS01805 PF00575 S1 RNA binding domain HF553_RS01810 PF01272 Transcription elongation factor, GreA/GreB, C-term HF553_RS01810 PF03449 Transcription elongation factor, N-terminal HF553_RS01815 PF00486 Transcriptional regulatory protein, C terminal HF553_RS01815 PF00072 Response regulator receiver domain HF553_RS01820 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS01820 PF00672 HAMP domain HF553_RS01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS01825 PF01293 Phosphoenolpyruvate carboxykinase HF553_RS01830 PF13687 Domain of unknown function (DUF4153) HF553_RS01835 PF01430 Hsp33 protein HF553_RS01840 PF01479 S4 domain HF553_RS01845 PF13419 Haloacid dehalogenase-like hydrolase HF553_RS01850 PF07095 Intracellular growth attenuator protein IgaA HF553_RS01855 PF00293 NUDIX domain HF553_RS01860 PF00905 Penicillin binding protein transpeptidase domain HF553_RS01860 PF17092 Penicillin-binding protein OB-like domain HF553_RS01860 PF00912 Transglycosylase HF553_RS01870 PF05137 Fimbrial assembly protein (PilN) HF553_RS01880 PF10748 DNA utilization proteins HofP HF553_RS01885 PF03958 Bacterial type II/III secretion system short domain HF553_RS01885 PF00263 Bacterial type II and III secretion system protein HF553_RS01890 PF01202 Shikimate kinase HF553_RS01895 PF01761 3-dehydroquinate synthase HF553_RS01900 PF05036 Sporulation related domain HF553_RS01905 PF02086 D12 class N6 adenine-specific DNA methyltransferase HF553_RS01910 PF00834 Ribulose-phosphate 3 epimerase family HF553_RS01915 PF13419 Haloacid dehalogenase-like hydrolase HF553_RS01920 PF00579 tRNA synthetases class I (W and Y) HF553_RS01925 PF13978 Protein of unknown function (DUF4223) HF553_RS01935 PF14824 Sirohaem biosynthesis protein central HF553_RS01935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HF553_RS01935 PF10414 Sirohaem synthase dimerisation region HF553_RS01940 PF01226 Formate/nitrite transporter HF553_RS01945 PF13806 Rieske-like [2Fe-2S] domain HF553_RS01950 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS01950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HF553_RS01950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HF553_RS01950 PF04324 BFD-like [2Fe-2S] binding domain HF553_RS01950 PF18267 Rubredoxin NAD+ reductase C-terminal domain HF553_RS01960 PF07690 Major Facilitator Superfamily HF553_RS01965 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HF553_RS01970 PF10832 Protein of unknown function (DUF2559) HF553_RS01975 PF02661 Fic/DOC family HF553_RS01980 PF00117 Glutamine amidotransferase class-I HF553_RS01985 PF00202 Aminotransferase class-III HF553_RS01990 PF12805 FUSC-like inner membrane protein yccS HF553_RS01995 PF00027 Cyclic nucleotide-binding domain HF553_RS01995 PF13545 Crp-like helix-turn-helix domain HF553_RS02000 PF02566 OsmC-like protein HF553_RS02005 PF00485 Phosphoribulokinase / Uridine kinase family HF553_RS02010 PF06794 Uncharacterised protein family (UPF0270) HF553_RS02015 PF00561 alpha/beta hydrolase fold HF553_RS02020 PF08803 Putative mono-oxygenase ydhR HF553_RS02025 PF03466 LysR substrate binding domain HF553_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS02030 PF00005 ABC transporter HF553_RS02030 PF12848 ABC transporter HF553_RS02035 PF02525 Flavodoxin-like fold HF553_RS02040 PF00999 Sodium/hydrogen exchanger family HF553_RS02040 PF02254 TrkA-N domain HF553_RS02045 PF09526 Probable metal-binding protein (DUF2387) HF553_RS02050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HF553_RS02055 PF04102 SlyX HF553_RS02060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HF553_RS02060 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HF553_RS02065 PF13309 HTH domain HF553_RS02065 PF08348 YheO-like PAS domain HF553_RS02070 PF02635 DsrE/DsrF-like family HF553_RS02075 PF02635 DsrE/DsrF-like family HF553_RS02080 PF04077 DsrH like protein HF553_RS02085 PF00164 Ribosomal protein S12/S23 HF553_RS02090 PF00177 Ribosomal protein S7p/S5e HF553_RS02095 PF03144 Elongation factor Tu domain 2 HF553_RS02095 PF00679 Elongation factor G C-terminus HF553_RS02095 PF00009 Elongation factor Tu GTP binding domain HF553_RS02095 PF03764 Elongation factor G, domain IV HF553_RS02095 PF14492 Elongation Factor G, domain II HF553_RS02100 PF00009 Elongation factor Tu GTP binding domain HF553_RS02100 PF03144 Elongation factor Tu domain 2 HF553_RS02100 PF03143 Elongation factor Tu C-terminal domain HF553_RS02105 PF04324 BFD-like [2Fe-2S] binding domain HF553_RS02110 PF00210 Ferritin-like domain HF553_RS02115 PF01478 Type IV leader peptidase family HF553_RS02120 PF00338 Ribosomal protein S10p/S20e HF553_RS02125 PF00297 Ribosomal protein L3 HF553_RS02130 PF00573 Ribosomal protein L4/L1 family HF553_RS02135 PF00276 Ribosomal protein L23 HF553_RS02140 PF03947 Ribosomal Proteins L2, C-terminal domain HF553_RS02140 PF00181 Ribosomal Proteins L2, RNA binding domain HF553_RS02145 PF00203 Ribosomal protein S19 HF553_RS02150 PF00237 Ribosomal protein L22p/L17e HF553_RS02155 PF00189 Ribosomal protein S3, C-terminal domain HF553_RS02155 PF07650 KH domain HF553_RS02160 PF00252 Ribosomal protein L16p/L10e HF553_RS02165 PF00831 Ribosomal L29 protein HF553_RS02170 PF00366 Ribosomal protein S17 HF553_RS02175 PF00238 Ribosomal protein L14p/L23e HF553_RS02180 PF00467 KOW motif HF553_RS02180 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HF553_RS02185 PF00673 ribosomal L5P family C-terminus HF553_RS02185 PF00281 Ribosomal protein L5 HF553_RS02190 PF00253 Ribosomal protein S14p/S29e HF553_RS02195 PF00410 Ribosomal protein S8 HF553_RS02200 PF00347 Ribosomal protein L6 HF553_RS02205 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HF553_RS02210 PF00333 Ribosomal protein S5, N-terminal domain HF553_RS02210 PF03719 Ribosomal protein S5, C-terminal domain HF553_RS02215 PF00327 Ribosomal protein L30p/L7e HF553_RS02220 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HF553_RS02225 PF00344 SecY translocase HF553_RS02230 PF00444 Ribosomal protein L36 HF553_RS02235 PF00416 Ribosomal protein S13/S18 HF553_RS02240 PF00411 Ribosomal protein S11 HF553_RS02245 PF01479 S4 domain HF553_RS02245 PF00163 Ribosomal protein S4/S9 N-terminal domain HF553_RS02250 PF01000 RNA polymerase Rpb3/RpoA insert domain HF553_RS02250 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HF553_RS02250 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HF553_RS02255 PF01196 Ribosomal protein L17 HF553_RS02260 PF09350 Domain of unknown function (DUF1992) HF553_RS02265 PF13411 MerR HTH family regulatory protein HF553_RS02270 PF03889 Alternative ribosome-rescue factor A HF553_RS02275 PF01741 Large-conductance mechanosensitive channel, MscL HF553_RS02280 PF02254 TrkA-N domain HF553_RS02280 PF02080 TrkA-C domain HF553_RS02285 PF01029 NusB family HF553_RS02285 PF01189 16S rRNA methyltransferase RsmB/F HF553_RS02290 PF00551 Formyl transferase HF553_RS02290 PF02911 Formyl transferase, C-terminal domain HF553_RS02295 PF01327 Polypeptide deformylase HF553_RS02300 PF02481 DNA recombination-mediator protein A HF553_RS02300 PF17782 DprA winged helix domain HF553_RS02305 PF04361 Protein of unknown function (DUF494) HF553_RS02310 PF01396 Topoisomerase DNA binding C4 zinc finger HF553_RS02315 PF01300 Telomere recombination HF553_RS02320 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HF553_RS02320 PF08501 Shikimate dehydrogenase substrate binding domain HF553_RS02320 PF01488 Shikimate / quinate 5-dehydrogenase HF553_RS02325 PF07369 Protein of unknown function (DUF1488) HF553_RS02330 PF00132 Bacterial transferase hexapeptide (six repeats) HF553_RS02375 PF00873 AcrB/AcrD/AcrF family HF553_RS02380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF553_RS02380 PF00529 HlyD membrane-fusion protein of T1SS HF553_RS02385 PF00440 Bacterial regulatory proteins, tetR family HF553_RS02385 PF08361 MAATS-type transcriptional repressor, C-terminal region HF553_RS02390 PF00990 Diguanylate cyclase, GGDEF domain HF553_RS02390 PF03707 Bacterial signalling protein N terminal repeat HF553_RS02390 PF00563 EAL domain HF553_RS02395 PF10831 Protein of unknown function (DUF2556) HF553_RS02400 PF01555 DNA methylase HF553_RS02405 PF02954 Bacterial regulatory protein, Fis family HF553_RS02410 PF01207 Dihydrouridine synthase (Dus) HF553_RS02425 PF00474 Sodium:solute symporter family HF553_RS02430 PF06196 Protein of unknown function (DUF997) HF553_RS02435 PF02785 Biotin carboxylase C-terminal domain HF553_RS02435 PF00289 Biotin carboxylase, N-terminal domain HF553_RS02435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF553_RS02440 PF00364 Biotin-requiring enzyme HF553_RS02445 PF01794 Ferric reductase like transmembrane component HF553_RS02450 PF00174 Oxidoreductase molybdopterin binding domain HF553_RS02455 PF00107 Zinc-binding dehydrogenase HF553_RS02455 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS02460 PF00990 Diguanylate cyclase, GGDEF domain HF553_RS02460 PF17157 Gammaproteobacterial periplasmic sensor domain HF553_RS02460 PF00563 EAL domain HF553_RS02470 PF04085 rod shape-determining protein MreC HF553_RS02475 PF04093 rod shape-determining protein MreD HF553_RS02480 PF02545 Maf-like protein HF553_RS02485 PF10150 Ribonuclease E/G family HF553_RS02485 PF00575 S1 RNA binding domain HF553_RS02490 PF13502 AsmA-like C-terminal region HF553_RS02490 PF13116 Protein of unknown function HF553_RS02495 PF01523 Putative modulator of DNA gyrase HF553_RS02500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS02500 PF03466 LysR substrate binding domain HF553_RS02505 PF07869 Protein of unknown function (DUF1656) HF553_RS02510 PF13533 Biotin-lipoyl like HF553_RS02515 PF04632 Fusaric acid resistance protein family HF553_RS02520 PF01797 Transposase IS200 like HF553_RS02525 PF01337 Barstar (barnase inhibitor) HF553_RS02530 PF07338 Protein of unknown function (DUF1471) HF553_RS02535 PF07338 Protein of unknown function (DUF1471) HF553_RS02540 PF02863 Arginine repressor, C-terminal domain HF553_RS02540 PF01316 Arginine repressor, DNA binding domain HF553_RS02545 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HF553_RS02545 PF00056 lactate/malate dehydrogenase, NAD binding domain HF553_RS02550 PF07702 UTRA domain HF553_RS02550 PF00392 Bacterial regulatory proteins, gntR family HF553_RS02560 PF00939 Sodium:sulfate symporter transmembrane region HF553_RS02565 PF05681 Fumarate hydratase (Fumerase) HF553_RS02570 PF05683 Fumarase C-terminus HF553_RS02575 PF04277 Oxaloacetate decarboxylase, gamma chain HF553_RS02580 PF00364 Biotin-requiring enzyme HF553_RS02580 PF00682 HMGL-like HF553_RS02580 PF02436 Conserved carboxylase domain HF553_RS02585 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HF553_RS02590 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HF553_RS02595 PF13180 PDZ domain HF553_RS02600 PF13180 PDZ domain HF553_RS02600 PF00595 PDZ domain HF553_RS02605 PF06295 Protein of unknown function (DUF1043) HF553_RS02610 PF03969 AFG1-like ATPase HF553_RS02615 PF00572 Ribosomal protein L13 HF553_RS02620 PF00380 Ribosomal protein S9/S16 HF553_RS02630 PF00043 Glutathione S-transferase, C-terminal domain HF553_RS02630 PF02798 Glutathione S-transferase, N-terminal domain HF553_RS02635 PF04386 Stringent starvation protein B HF553_RS02640 PF00392 Bacterial regulatory proteins, gntR family HF553_RS02640 PF07729 FCD domain HF553_RS02645 PF00701 Dihydrodipicolinate synthetase family HF553_RS02650 PF07690 Major Facilitator Superfamily HF553_RS02655 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HF553_RS02660 PF00480 ROK family HF553_RS02665 PF04074 YhcH/YjgK/YiaL HF553_RS02670 PF07969 Amidohydrolase family HF553_RS02675 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HF553_RS02680 PF06250 YhcG PDDEXK nuclease domain HF553_RS02680 PF17761 DUF1016 N-terminal domain HF553_RS02685 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS02685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HF553_RS02690 PF00310 Glutamine amidotransferases class-II HF553_RS02690 PF01645 Conserved region in glutamate synthase HF553_RS02690 PF04898 Glutamate synthase central domain HF553_RS02690 PF01493 GXGXG motif HF553_RS02695 PF16199 Radical_SAM C-terminal domain HF553_RS02695 PF04055 Radical SAM superfamily HF553_RS02700 PF18415 Histidine kinase receptor ArcB trans-membrane domain HF553_RS02700 PF00072 Response regulator receiver domain HF553_RS02700 PF00989 PAS fold HF553_RS02700 PF01627 Hpt domain HF553_RS02700 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS02710 PF00912 Transglycosylase HF553_RS02715 PF10707 PhoP regulatory network protein YrbL HF553_RS02720 PF00381 PTS HPr component phosphorylation site HF553_RS02725 PF03668 P-loop ATPase protein family HF553_RS02730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HF553_RS02735 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HF553_RS02740 PF04963 Sigma-54 factor, core binding domain HF553_RS02740 PF04552 Sigma-54, DNA binding domain HF553_RS02740 PF00309 Sigma-54 factor, Activator interacting domain (AID) HF553_RS02745 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF553_RS02745 PF00005 ABC transporter HF553_RS02750 PF03968 OstA-like protein HF553_RS02755 PF06835 Lipopolysaccharide-assembly, LptC-related HF553_RS02765 PF00571 CBS domain HF553_RS02765 PF01380 SIS domain HF553_RS02770 PF01699 Sodium/calcium exchanger protein HF553_RS02775 PF00005 ABC transporter HF553_RS02780 PF02405 Permease MlaE HF553_RS02785 PF02470 MlaD protein HF553_RS02790 PF05494 MlaC protein HF553_RS02795 PF13466 STAS domain HF553_RS02800 PF01722 BolA-like protein HF553_RS02805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HF553_RS02810 PF13693 Winged helix-turn-helix DNA-binding HF553_RS02815 PF00348 Polyprenyl synthetase HF553_RS02820 PF00829 Ribosomal prokaryotic L21 protein HF553_RS02825 PF01016 Ribosomal L27 protein HF553_RS02830 PF00892 EamA-like transporter family HF553_RS02835 PF01926 50S ribosome-binding GTPase HF553_RS02835 PF01018 GTP1/OBG HF553_RS02840 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HF553_RS02845 PF01272 Transcription elongation factor, GreA/GreB, C-term HF553_RS02845 PF03449 Transcription elongation factor, N-terminal HF553_RS02850 PF01985 CRS1 / YhbY (CRM) domain HF553_RS02855 PF01728 FtsJ-like methyltransferase HF553_RS02860 PF00004 ATPase family associated with various cellular activities (AAA) HF553_RS02860 PF17862 AAA+ lid domain HF553_RS02860 PF06480 FtsH Extracellular HF553_RS02860 PF01434 Peptidase family M41 HF553_RS02865 PF00809 Pterin binding enzyme HF553_RS02870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HF553_RS02870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HF553_RS02870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HF553_RS02870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HF553_RS02875 PF03840 Preprotein translocase SecG subunit HF553_RS02890 PF00764 Arginosuccinate synthase HF553_RS02900 PF17384 RimP C-terminal SH3 domain HF553_RS02900 PF02576 RimP N-terminal domain HF553_RS02905 PF08529 NusA N-terminal domain HF553_RS02905 PF13184 NusA-like KH domain HF553_RS02910 PF04760 Translation initiation factor IF-2, N-terminal region HF553_RS02910 PF00009 Elongation factor Tu GTP binding domain HF553_RS02910 PF11987 Translation-initiation factor 2 HF553_RS02910 PF08364 Bacterial translation initiation factor IF-2 associated region HF553_RS02915 PF02033 Ribosome-binding factor A HF553_RS02920 PF01509 TruB family pseudouridylate synthase (N terminal domain) HF553_RS02920 PF16198 tRNA pseudouridylate synthase B C-terminal domain HF553_RS02920 PF09157 Pseudouridine synthase II TruB, C-terminal HF553_RS02925 PF00312 Ribosomal protein S15 HF553_RS02930 PF03725 3' exoribonuclease family, domain 2 HF553_RS02930 PF01138 3' exoribonuclease family, domain 1 HF553_RS02930 PF00575 S1 RNA binding domain HF553_RS02930 PF00013 KH domain HF553_RS02930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HF553_RS02935 PF07719 Tetratricopeptide repeat HF553_RS02935 PF13181 Tetratricopeptide repeat HF553_RS02945 PF00270 DEAD/DEAH box helicase HF553_RS02945 PF12343 Cold shock protein DEAD box A HF553_RS02945 PF03880 DbpA RNA binding domain HF553_RS02945 PF00271 Helicase conserved C-terminal domain HF553_RS02950 PF03222 Tryptophan/tyrosine permease family HF553_RS02960 PF03734 L,D-transpeptidase catalytic domain HF553_RS02965 PF00296 Luciferase-like monooxygenase HF553_RS02970 PF01136 Peptidase family U32 HF553_RS02975 PF01136 Peptidase family U32 HF553_RS02980 PF02036 SCP-2 sterol transfer family HF553_RS02985 PF13508 Acetyltransferase (GNAT) domain HF553_RS02990 PF01541 GIY-YIG catalytic domain HF553_RS03000 PF01965 DJ-1/PfpI family HF553_RS03005 PF13460 NAD(P)H-binding HF553_RS03010 PF04972 BON domain HF553_RS03015 PF13580 SIS domain HF553_RS03020 PF02021 Uncharacterised protein family UPF0102 HF553_RS03025 PF04348 LppC putative lipoprotein HF553_RS03030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HF553_RS03035 PF08220 DeoR-like helix-turn-helix domain HF553_RS03040 PF00107 Zinc-binding dehydrogenase HF553_RS03040 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS03045 PF03611 PTS system sugar-specific permease component HF553_RS03050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HF553_RS03055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HF553_RS03060 PF08013 Tagatose 6 phosphate kinase HF553_RS03065 PF01116 Fructose-bisphosphate aldolase class-II HF553_RS03070 PF08666 SAF domain HF553_RS03070 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HF553_RS03075 PF03328 HpcH/HpaI aldolase/citrate lyase family HF553_RS03080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF553_RS03080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF553_RS03085 PF02595 Glycerate kinase family HF553_RS03095 PF03466 LysR substrate binding domain HF553_RS03095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS03100 PF00291 Pyridoxal-phosphate dependent enzyme HF553_RS03105 PF03222 Tryptophan/tyrosine permease family HF553_RS03110 PF00871 Acetokinase family HF553_RS03115 PF01228 Glycine radical HF553_RS03115 PF02901 Pyruvate formate lyase-like HF553_RS03120 PF03313 Serine dehydratase alpha chain HF553_RS03120 PF03315 Serine dehydratase beta chain HF553_RS03130 PF03313 Serine dehydratase alpha chain HF553_RS03140 PF17954 Quercetinase C-terminal cupin domain HF553_RS03140 PF02678 Pirin HF553_RS03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS03145 PF03466 LysR substrate binding domain HF553_RS03150 PF05656 Protein of unknown function (DUF805) HF553_RS03155 PF13409 Glutathione S-transferase, N-terminal domain HF553_RS03160 PF07681 DoxX HF553_RS03165 PF13997 YqjK-like protein HF553_RS03170 PF07332 Putative Actinobacterial Holin-X, holin superfamily III HF553_RS03175 PF05957 Bacterial protein of unknown function (DUF883) HF553_RS03180 PF06476 Protein of unknown function (DUF1090) HF553_RS03185 PF13721 SecD export protein N-terminal TM region HF553_RS03190 PF09335 SNARE associated Golgi protein HF553_RS03195 PF00375 Sodium:dicarboxylate symporter family HF553_RS03200 PF03741 Integral membrane protein TerC family HF553_RS03205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HF553_RS03210 PF02698 DUF218 domain HF553_RS03215 PF01863 Protein of unknown function DUF45 HF553_RS03220 PF05175 Methyltransferase small domain HF553_RS03225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HF553_RS03225 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS03230 PF00202 Aminotransferase class-III HF553_RS03235 PF08447 PAS fold HF553_RS03235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF553_RS03245 PF00672 HAMP domain HF553_RS03245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF553_RS03245 PF02203 Tar ligand binding domain homologue HF553_RS03250 PF03551 Transcriptional regulator PadR-like family HF553_RS03255 PF08021 Siderophore-interacting FAD-binding domain HF553_RS03255 PF04954 Siderophore-interacting protein HF553_RS03260 PF00589 Phage integrase family HF553_RS03260 PF02899 Phage integrase, N-terminal SAM-like domain HF553_RS03270 PF16452 Bacteriophage CI repressor C-terminal domain HF553_RS03270 PF07022 Bacteriophage CI repressor helix-turn-helix domain HF553_RS03280 PF06892 Phage regulatory protein CII (CP76) HF553_RS03305 PF00929 Exonuclease HF553_RS03310 PF12961 Domain of unknown function (DUF3850) HF553_RS03315 PF02086 D12 class N6 adenine-specific DNA methyltransferase HF553_RS03320 PF05840 Bacteriophage replication gene A protein (GPA) HF553_RS03430 PF03335 Phage tail fibre repeat HF553_RS03430 PF08400 Prophage tail fibre N-terminal HF553_RS03430 PF07484 Phage Tail Collar Domain HF553_RS03485 PF07638 ECF sigma factor HF553_RS03505 PF13276 HTH-like domain HF553_RS03505 PF00665 Integrase core domain HF553_RS03505 PF01527 Transposase HF553_RS03510 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HF553_RS03510 PF00356 Bacterial regulatory proteins, lacI family HF553_RS03515 PF16875 Glycosyl hydrolase family 36 N-terminal domain HF553_RS03515 PF16874 Glycosyl hydrolase family 36 C-terminal domain HF553_RS03520 PF01306 LacY proton/sugar symporter HF553_RS03525 PF08244 Glycosyl hydrolases family 32 C terminal HF553_RS03525 PF00251 Glycosyl hydrolases family 32 N-terminal domain HF553_RS03530 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HF553_RS03545 PF00294 pfkB family carbohydrate kinase HF553_RS03550 PF11471 Maltoporin periplasmic N-terminal extension HF553_RS03550 PF02264 LamB porin HF553_RS03565 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HF553_RS03575 PF10544 T5orf172 domain HF553_RS03615 PF16168 Adhesin of bacterial autotransporter system, probable stalk HF553_RS03615 PF03797 Autotransporter beta-domain HF553_RS03615 PF13018 Extended Signal Peptide of Type V secretion system HF553_RS03620 PF06006 Bacterial protein of unknown function (DUF905) HF553_RS03625 PF06067 Domain of unknown function (DUF932) HF553_RS03630 PF03230 Antirestriction protein HF553_RS03635 PF04002 RadC-like JAB domain HF553_RS03640 PF06174 Protein of unknown function (DUF987) HF553_RS03650 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HF553_RS03655 PF06755 CbtA_toxin of type IV toxin-antitoxin system HF553_RS03675 PF00589 Phage integrase family HF553_RS03680 PF16452 Bacteriophage CI repressor C-terminal domain HF553_RS03680 PF07022 Bacteriophage CI repressor helix-turn-helix domain HF553_RS03690 PF06892 Phage regulatory protein CII (CP76) HF553_RS03700 PF17282 Family of unknown function (DUF5347) HF553_RS03710 PF01258 Prokaryotic dksA/traR C4-type zinc finger HF553_RS03715 PF02086 D12 class N6 adenine-specific DNA methyltransferase HF553_RS03720 PF05840 Bacteriophage replication gene A protein (GPA) HF553_RS03730 PF06183 DinI-like family HF553_RS03830 PF07484 Phage Tail Collar Domain HF553_RS03830 PF03335 Phage tail fibre repeat HF553_RS03830 PF08400 Prophage tail fibre N-terminal HF553_RS03835 PF02413 Caudovirales tail fibre assembly protein, lambda gpK HF553_RS03840 PF04984 Phage tail sheath protein subtilisin-like domain HF553_RS03840 PF17482 Phage tail sheath C-terminal domain HF553_RS03875 PF04606 Ogr/Delta-like zinc finger HF553_RS03890 PF03167 Uracil DNA glycosylase superfamily HF553_RS03895 PF03979 Sigma-70 factor, region 1.1 HF553_RS03895 PF04542 Sigma-70 region 2 HF553_RS03895 PF04539 Sigma-70 region 3 HF553_RS03895 PF00140 Sigma-70 factor, region 1.2 HF553_RS03895 PF04546 Sigma-70, non-essential region HF553_RS03895 PF04545 Sigma-70, region 4 HF553_RS03900 PF08275 DNA primase catalytic core, N-terminal domain HF553_RS03900 PF08278 DNA primase DnaG DnaB-binding HF553_RS03900 PF01807 CHC2 zinc finger HF553_RS03900 PF10410 DnaB-helicase binding domain of primase HF553_RS03905 PF01165 Ribosomal protein S21 HF553_RS03910 PF00814 Glycoprotease family HF553_RS03925 PF02660 Glycerol-3-phosphate acyltransferase HF553_RS03930 PF02152 Dihydroneopterin aldolase HF553_RS03935 PF02673 Bacitracin resistance protein BacA HF553_RS03940 PF12627 Probable RNA and SrmB- binding site of polymerase A HF553_RS03940 PF01743 Poly A polymerase head domain HF553_RS03940 PF01966 HD domain HF553_RS03945 PF08239 Bacterial SH3 domain HF553_RS03950 PF01928 CYTH domain HF553_RS03955 PF03710 Glutamate-ammonia ligase adenylyltransferase HF553_RS03955 PF08335 GlnD PII-uridylyltransferase HF553_RS03960 PF00294 pfkB family carbohydrate kinase HF553_RS03960 PF01467 Cytidylyltransferase-like HF553_RS03970 PF01145 SPFH domain / Band 7 family HF553_RS03970 PF15975 Flotillin HF553_RS03975 PF07290 Protein of unknown function (DUF1449) HF553_RS03980 PF08971 Glycogen synthesis protein HF553_RS03985 PF04380 Membrane fusogenic activity HF553_RS03990 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HF553_RS03995 PF02600 Disulfide bond formation protein DsbB HF553_RS04000 PF01323 DSBA-like thioredoxin domain HF553_RS04005 PF17425 Arylsulfotransferase Ig-like domain HF553_RS04005 PF05935 Arylsulfotransferase (ASST) HF553_RS04010 PF02535 ZIP Zinc transporter HF553_RS04015 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HF553_RS04020 PF03738 Glutathionylspermidine synthase preATP-grasp HF553_RS04025 PF06693 Protein of unknown function (DUF1190) HF553_RS04030 PF02321 Outer membrane efflux protein HF553_RS04035 PF00293 NUDIX domain HF553_RS04040 PF06853 Protein of unknown function (DUF1249) HF553_RS04045 PF00149 Calcineurin-like phosphoesterase HF553_RS04050 PF05728 Uncharacterised protein family (UPF0227) HF553_RS04055 PF00204 DNA gyrase B HF553_RS04055 PF00986 DNA gyrase B subunit, carboxyl terminus HF553_RS04055 PF01751 Toprim domain HF553_RS04055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS04060 PF03992 Antibiotic biosynthesis monooxygenase HF553_RS04065 PF02525 Flavodoxin-like fold HF553_RS04070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS04070 PF08521 Two-component sensor kinase N-terminal HF553_RS04070 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS04075 PF00486 Transcriptional regulatory protein, C terminal HF553_RS04075 PF00072 Response regulator receiver domain HF553_RS04080 PF04076 Bacterial OB fold (BOF) protein HF553_RS04085 PF06445 GyrI-like small molecule binding domain HF553_RS04090 PF03989 DNA gyrase C-terminal domain, beta-propeller HF553_RS04090 PF00521 DNA gyrase/topoisomerase IV, subunit A HF553_RS04095 PF01553 Acyltransferase HF553_RS04100 PF00394 Multicopper oxidase HF553_RS04100 PF07732 Multicopper oxidase HF553_RS04100 PF07731 Multicopper oxidase HF553_RS04125 PF04055 Radical SAM superfamily HF553_RS04125 PF08497 Radical SAM N-terminal HF553_RS04125 PF11842 Domain of unknown function (DUF3362) HF553_RS04135 PF00939 Sodium:sulfate symporter transmembrane region HF553_RS04140 PF00248 Aldo/keto reductase family HF553_RS04145 PF00465 Iron-containing alcohol dehydrogenase HF553_RS04150 PF06719 AraC-type transcriptional regulator N-terminus HF553_RS04150 PF12833 Helix-turn-helix domain HF553_RS04155 PF09335 SNARE associated Golgi protein HF553_RS04160 PF01053 Cys/Met metabolism PLP-dependent enzyme HF553_RS04165 PF01618 MotA/TolQ/ExbB proton channel family HF553_RS04170 PF02472 Biopolymer transport protein ExbD/TolR HF553_RS04195 PF03350 Uncharacterized protein family, UPF0114 HF553_RS04200 PF00672 HAMP domain HF553_RS04200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF553_RS04200 PF02203 Tar ligand binding domain homologue HF553_RS04205 PF11115 Protein of unknown function (DUF2623) HF553_RS04210 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HF553_RS04210 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HF553_RS04215 PF13247 4Fe-4S dicluster domain HF553_RS04220 PF03916 Polysulphide reductase, NrfD HF553_RS04225 PF00374 Nickel-dependent hydrogenase HF553_RS04230 PF01750 Hydrogenase maturation protease HF553_RS04235 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE HF553_RS04240 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HF553_RS04245 PF01455 HupF/HypC family HF553_RS04260 PF02798 Glutathione S-transferase, N-terminal domain HF553_RS04265 PF05257 CHAP domain HF553_RS04265 PF03738 Glutathionylspermidine synthase preATP-grasp HF553_RS04275 PF02614 Glucuronate isomerase HF553_RS04280 PF01232 Mannitol dehydrogenase Rossmann domain HF553_RS04280 PF08125 Mannitol dehydrogenase C-terminal domain HF553_RS04285 PF03786 D-mannonate dehydratase (UxuA) HF553_RS04290 PF07690 Major Facilitator Superfamily HF553_RS04300 PF01522 Polysaccharide deacetylase HF553_RS04310 PF04965 Gene 25-like lysozyme HF553_RS04315 PF00171 Aldehyde dehydrogenase family HF553_RS04320 PF01266 FAD dependent oxidoreductase HF553_RS04330 PF13520 Amino acid permease HF553_RS04340 PF00196 Bacterial regulatory proteins, luxR family HF553_RS04345 PF00970 Oxidoreductase FAD-binding domain HF553_RS04345 PF00175 Oxidoreductase NAD-binding domain HF553_RS04345 PF00111 2Fe-2S iron-sulfur cluster binding domain HF553_RS04350 PF07338 Protein of unknown function (DUF1471) HF553_RS04360 PF03466 LysR substrate binding domain HF553_RS04370 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HF553_RS04415 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HF553_RS04420 PF06174 Protein of unknown function (DUF987) HF553_RS04425 PF04002 RadC-like JAB domain HF553_RS04430 PF03230 Antirestriction protein HF553_RS04435 PF06067 Domain of unknown function (DUF932) HF553_RS04440 PF06006 Bacterial protein of unknown function (DUF905) HF553_RS04450 PF01926 50S ribosome-binding GTPase HF553_RS04535 PF00809 Pterin binding enzyme HF553_RS04540 PF01636 Phosphotransferase enzyme family HF553_RS04545 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase HF553_RS04555 PF02909 Tetracyclin repressor-like, C-terminal domain HF553_RS04555 PF00440 Bacterial regulatory proteins, tetR family HF553_RS04560 PF07690 Major Facilitator Superfamily HF553_RS04570 PF03466 LysR substrate binding domain HF553_RS04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS04575 PF07690 Major Facilitator Superfamily HF553_RS04590 PF04703 FaeA-like protein HF553_RS04595 PF03333 Adhesin biosynthesis transcription regulatory protein HF553_RS04605 PF01966 HD domain HF553_RS04605 PF13286 Phosphohydrolase-associated domain HF553_RS04640 PF08463 EcoEI R protein C-terminal HF553_RS04640 PF00271 Helicase conserved C-terminal domain HF553_RS04640 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HF553_RS04640 PF04851 Type III restriction enzyme, res subunit HF553_RS04645 PF12161 HsdM N-terminal domain HF553_RS04645 PF02384 N-6 DNA Methylase HF553_RS04650 PF01420 Type I restriction modification DNA specificity domain HF553_RS04655 PF02463 RecF/RecN/SMC N terminal domain HF553_RS04670 PF13505 Outer membrane protein beta-barrel domain HF553_RS04700 PF00884 Sulfatase HF553_RS04710 PF03811 InsA N-terminal domain HF553_RS04710 PF12759 InsA C-terminal domain HF553_RS04725 PF08244 Glycosyl hydrolases family 32 C terminal HF553_RS04725 PF00251 Glycosyl hydrolases family 32 N-terminal domain HF553_RS04730 PF01306 LacY proton/sugar symporter HF553_RS04735 PF16875 Glycosyl hydrolase family 36 N-terminal domain HF553_RS04735 PF16874 Glycosyl hydrolase family 36 C-terminal domain HF553_RS04740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HF553_RS04740 PF00356 Bacterial regulatory proteins, lacI family HF553_RS04745 PF00589 Phage integrase family HF553_RS04745 PF14659 Phage integrase, N-terminal SAM-like domain HF553_RS04745 PF13356 Arm DNA-binding domain HF553_RS04755 PF04474 Protein of unknown function (DUF554) HF553_RS04760 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HF553_RS04760 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HF553_RS04760 PF01276 Orn/Lys/Arg decarboxylase, major domain HF553_RS04765 PF03825 Nucleoside H+ symporter HF553_RS04770 PF01464 Transglycosylase SLT domain HF553_RS04770 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HF553_RS04775 PF04362 Bacterial Fe(2+) trafficking HF553_RS04780 PF14815 NUDIX domain HF553_RS04780 PF00730 HhH-GPD superfamily base excision DNA repair protein HF553_RS04780 PF00633 Helix-hairpin-helix motif HF553_RS04785 PF02390 Putative methyltransferase HF553_RS04790 PF04320 Protein with unknown function (DUF469) HF553_RS04795 PF11101 Protein of unknown function (DUF2884) HF553_RS04800 PF17763 Glutaminase/Asparaginase C-terminal domain HF553_RS04800 PF00710 Asparaginase, N-terminal HF553_RS04805 PF06717 Protein of unknown function (DUF1202) HF553_RS04810 PF06969 HemN C-terminal domain HF553_RS04810 PF04055 Radical SAM superfamily HF553_RS04815 PF01725 Ham1 family HF553_RS04820 PF02594 Uncharacterised ACR, YggU family COG1872 HF553_RS04825 PF02325 YGGT family HF553_RS04830 PF01168 Alanine racemase, N-terminal domain HF553_RS04835 PF00437 Type II/IV secretion system protein HF553_RS04845 PF03652 Holliday junction resolvase HF553_RS04850 PF02622 Uncharacterized ACR, COG1678 HF553_RS04855 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HF553_RS04855 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HF553_RS04860 PF04452 RNA methyltransferase HF553_RS04865 PF04231 Endonuclease I HF553_RS04870 PF10263 SprT-like family HF553_RS04870 PF17283 SprT-like zinc ribbon domain HF553_RS04875 PF00083 Sugar (and other) transporter HF553_RS04880 PF00438 S-adenosylmethionine synthetase, N-terminal domain HF553_RS04880 PF02772 S-adenosylmethionine synthetase, central domain HF553_RS04880 PF02773 S-adenosylmethionine synthetase, C-terminal domain HF553_RS04890 PF17430 Uncharacterized YqgC-like HF553_RS04900 PF17944 Arginine decarboxylase C-terminal helical extension HF553_RS04900 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HF553_RS04900 PF17810 Arginine decarboxylase helical bundle domain HF553_RS04905 PF00491 Arginase family HF553_RS04910 PF01435 Peptidase family M48 HF553_RS04915 PF02779 Transketolase, pyrimidine binding domain HF553_RS04915 PF02780 Transketolase, C-terminal domain HF553_RS04915 PF00456 Transketolase, thiamine diphosphate binding domain HF553_RS04920 PF00005 ABC transporter HF553_RS04925 PF00005 ABC transporter HF553_RS04945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HF553_RS04945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HF553_RS04950 PF00162 Phosphoglycerate kinase HF553_RS04955 PF01116 Fructose-bisphosphate aldolase class-II HF553_RS04960 PF05552 Conserved TM helix HF553_RS04960 PF00924 Mechanosensitive ion channel HF553_RS04965 PF01810 LysE type translocator HF553_RS04970 PF04402 Protein of unknown function (DUF541) HF553_RS04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS04980 PF03466 LysR substrate binding domain HF553_RS04985 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HF553_RS04990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF553_RS04990 PF01842 ACT domain HF553_RS04990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF553_RS04995 PF01812 5-formyltetrahydrofolate cyclo-ligase family HF553_RS05005 PF05164 Cell division protein ZapA HF553_RS05010 PF03695 Uncharacterised protein family (UPF0149) HF553_RS05015 PF05195 Aminopeptidase P, N-terminal domain HF553_RS05015 PF00557 Metallopeptidase family M24 HF553_RS05020 PF01494 FAD binding domain HF553_RS05025 PF01494 FAD binding domain HF553_RS05030 PF01571 Aminomethyltransferase folate-binding domain HF553_RS05030 PF08669 Glycine cleavage T-protein C-terminal barrel domain HF553_RS05035 PF01597 Glycine cleavage H-protein HF553_RS05040 PF02347 Glycine cleavage system P-protein HF553_RS05050 PF00232 Glycosyl hydrolase family 1 HF553_RS05060 PF03006 Haemolysin-III related HF553_RS05070 PF01571 Aminomethyltransferase folate-binding domain HF553_RS05075 PF03937 Flavinator of succinate dehydrogenase HF553_RS05080 PF07254 Membrane-bound toxin component of toxin-antitoxin system HF553_RS05085 PF00258 Flavodoxin HF553_RS05090 PF00589 Phage integrase family HF553_RS05090 PF02899 Phage integrase, N-terminal SAM-like domain HF553_RS05095 PF13098 Thioredoxin-like domain HF553_RS05095 PF10411 Disulfide bond isomerase protein N-terminus HF553_RS05100 PF17768 RecJ OB domain HF553_RS05100 PF02272 DHHA1 domain HF553_RS05100 PF01368 DHH family HF553_RS05110 PF01336 OB-fold nucleic acid binding domain HF553_RS05110 PF00152 tRNA synthetases class II (D, K and N) HF553_RS05115 PF00293 NUDIX domain HF553_RS05120 PF01476 LysM domain HF553_RS05120 PF01551 Peptidase family M23 HF553_RS05145 PF01850 PIN domain HF553_RS05150 PF13505 Outer membrane protein beta-barrel domain HF553_RS05160 PF00419 Fimbrial protein HF553_RS05165 PF00577 Outer membrane usher protein HF553_RS05165 PF13954 PapC N-terminal domain HF553_RS05165 PF13953 PapC C-terminal domain HF553_RS05170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS05170 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS05190 PF03824 High-affinity nickel-transport protein HF553_RS05195 PF02583 Metal-sensitive transcriptional repressor HF553_RS05200 PF03222 Tryptophan/tyrosine permease family HF553_RS05210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS05210 PF03466 LysR substrate binding domain HF553_RS05215 PF00108 Thiolase, N-terminal domain HF553_RS05215 PF02803 Thiolase, C-terminal domain HF553_RS05220 PF04962 KduI/IolB family HF553_RS05230 PF00083 Sugar (and other) transporter HF553_RS05235 PF01177 Asp/Glu/Hydantoin racemase HF553_RS05240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS05240 PF03466 LysR substrate binding domain HF553_RS05245 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HF553_RS05245 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HF553_RS05250 PF00356 Bacterial regulatory proteins, lacI family HF553_RS05255 PF00356 Bacterial regulatory proteins, lacI family HF553_RS05260 PF00501 AMP-binding enzyme HF553_RS05260 PF01553 Acyltransferase HF553_RS05265 PF07690 Major Facilitator Superfamily HF553_RS05270 PF00248 Aldo/keto reductase family HF553_RS05275 PF06004 Bacterial protein of unknown function (DUF903) HF553_RS05280 PF03741 Integral membrane protein TerC family HF553_RS05285 PF02976 DNA mismatch repair enzyme MutH HF553_RS05290 PF00293 NUDIX domain HF553_RS05295 PF01590 GAF domain HF553_RS05295 PF00391 PEP-utilising enzyme, mobile domain HF553_RS05295 PF02896 PEP-utilising enzyme, TIM barrel domain HF553_RS05295 PF05524 PEP-utilising enzyme, N-terminal HF553_RS05300 PF01790 Prolipoprotein diacylglyceryl transferase HF553_RS05305 PF00303 Thymidylate synthase HF553_RS05310 PF07963 Prokaryotic N-terminal methylation motif HF553_RS05315 PF07963 Prokaryotic N-terminal methylation motif HF553_RS05320 PF10713 Protein of unknown function (DUF2509) HF553_RS05325 PF07963 Prokaryotic N-terminal methylation motif HF553_RS05325 PF12528 Type II secretion prepilin peptidase dependent protein C HF553_RS05330 PF17946 RecC C-terminal domain HF553_RS05335 PF00675 Insulinase (Peptidase family M16) HF553_RS05335 PF16187 Middle or third domain of peptidase_M16 HF553_RS05335 PF05193 Peptidase M16 inactive domain HF553_RS05340 PF13361 UvrD-like helicase C-terminal domain HF553_RS05340 PF12705 PD-(D/E)XK nuclease superfamily HF553_RS05340 PF00580 UvrD/REP helicase N-terminal domain HF553_RS05345 PF13538 UvrD-like helicase C-terminal domain HF553_RS05350 PF00696 Amino acid kinase family HF553_RS05350 PF00583 Acetyltransferase (GNAT) family HF553_RS05355 PF11741 AMIN domain HF553_RS05355 PF01520 N-acetylmuramoyl-L-alanine amidase HF553_RS05370 PF06725 3D domain HF553_RS05370 PF03562 MltA specific insert domain HF553_RS05375 PF00899 ThiF family HF553_RS05380 PF00892 EamA-like transporter family HF553_RS05385 PF02657 Fe-S metabolism associated domain HF553_RS05390 PF00266 Aminotransferase class-V HF553_RS05395 PF06004 Bacterial protein of unknown function (DUF903) HF553_RS05400 PF03466 LysR substrate binding domain HF553_RS05400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS05405 PF04241 Protein of unknown function (DUF423) HF553_RS05410 PF18125 RlmM ferredoxin-like domain HF553_RS05410 PF01728 FtsJ-like methyltransferase HF553_RS05415 PF08220 DeoR-like helix-turn-helix domain HF553_RS05415 PF00455 DeoR C terminal sensor domain HF553_RS05420 PF05025 RbsD / FucU transport protein family HF553_RS05425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HF553_RS05425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HF553_RS05430 PF02952 L-fucose isomerase, C-terminal domain HF553_RS05430 PF07881 L-fucose isomerase, first N-terminal domain HF553_RS05430 PF07882 L-fucose isomerase, second N-terminal domain HF553_RS05435 PF07690 Major Facilitator Superfamily HF553_RS05440 PF00596 Class II Aldolase and Adducin N-terminal domain HF553_RS05445 PF00465 Iron-containing alcohol dehydrogenase HF553_RS05450 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HF553_RS05450 PF01367 5'-3' exonuclease, C-terminal SAM fold HF553_RS05455 PF03315 Serine dehydratase beta chain HF553_RS05455 PF03313 Serine dehydratase alpha chain HF553_RS05465 PF11892 Domain of unknown function (DUF3412) HF553_RS05465 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HF553_RS05465 PF03641 Possible lysine decarboxylase HF553_RS05470 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HF553_RS05470 PF14489 QueF-like protein HF553_RS05475 PF07348 Syd protein (SUKH-2) HF553_RS05485 PF00849 RNA pseudouridylate synthase HF553_RS05490 PF00258 Flavodoxin HF553_RS05500 PF07690 Major Facilitator Superfamily HF553_RS05505 PF13378 Enolase C-terminal domain-like HF553_RS05505 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HF553_RS05510 PF13378 Enolase C-terminal domain-like HF553_RS05515 PF02595 Glycerate kinase family HF553_RS05520 PF00072 Response regulator receiver domain HF553_RS05520 PF00672 HAMP domain HF553_RS05520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HF553_RS05520 PF01627 Hpt domain HF553_RS05520 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS05520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS05525 PF01938 TRAM domain HF553_RS05525 PF05958 tRNA (Uracil-5-)-methyltransferase HF553_RS05530 PF02824 TGS domain HF553_RS05530 PF13291 ACT domain HF553_RS05530 PF04607 Region found in RelA / SpoT proteins HF553_RS05535 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HF553_RS05555 PF00419 Fimbrial protein HF553_RS05565 PF00419 Fimbrial protein HF553_RS05570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS05570 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS05575 PF13953 PapC C-terminal domain HF553_RS05575 PF13954 PapC N-terminal domain HF553_RS05575 PF00577 Outer membrane usher protein HF553_RS05580 PF00419 Fimbrial protein HF553_RS05585 PF03819 MazG nucleotide pyrophosphohydrolase domain HF553_RS05590 PF06418 CTP synthase N-terminus HF553_RS05590 PF00117 Glutamine amidotransferase class-I HF553_RS05595 PF03952 Enolase, N-terminal domain HF553_RS05595 PF00113 Enolase, C-terminal TIM barrel domain HF553_RS05600 PF04055 Radical SAM superfamily HF553_RS05605 PF03099 Biotin/lipoate A/B protein ligase family HF553_RS05605 PF12706 Beta-lactamase superfamily domain HF553_RS05610 PF01242 6-pyruvoyl tetrahydropterin synthase HF553_RS05615 PF00667 FAD binding domain HF553_RS05615 PF00258 Flavodoxin HF553_RS05615 PF00175 Oxidoreductase NAD-binding domain HF553_RS05620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HF553_RS05620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HF553_RS05625 PF01507 Phosphoadenosine phosphosulfate reductase family HF553_RS05630 PF11047 Salmonella outer protein D HF553_RS05635 PF00271 Helicase conserved C-terminal domain HF553_RS05635 PF00270 DEAD/DEAH box helicase HF553_RS05635 PF18019 HD domain HF553_RS05650 PF09344 CT1975-like protein HF553_RS05655 PF09704 CRISPR-associated protein (Cas_Cas5) HF553_RS05665 PF01867 CRISPR associated protein Cas1 HF553_RS05670 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) HF553_RS05675 PF04389 Peptidase family M28 HF553_RS05680 PF01507 Phosphoadenosine phosphosulfate reductase family HF553_RS05685 PF00009 Elongation factor Tu GTP binding domain HF553_RS05695 PF12084 Protein of unknown function (DUF3561) HF553_RS05700 PF04977 Septum formation initiator HF553_RS05705 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HF553_RS05710 PF02542 YgbB family HF553_RS05715 PF01142 tRNA pseudouridine synthase D (TruD) HF553_RS05720 PF01975 Survival protein SurE HF553_RS05730 PF01476 LysM domain HF553_RS05730 PF01551 Peptidase family M23 HF553_RS05735 PF04545 Sigma-70, region 4 HF553_RS05735 PF04539 Sigma-70 region 3 HF553_RS05735 PF04542 Sigma-70 region 2 HF553_RS05735 PF00140 Sigma-70 factor, region 1.2 HF553_RS05745 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HF553_RS05750 PF02441 Flavoprotein HF553_RS05755 PF01047 MarR family HF553_RS05760 PF08220 DeoR-like helix-turn-helix domain HF553_RS05760 PF00455 DeoR C terminal sensor domain HF553_RS05765 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF553_RS05765 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF553_RS05770 PF17042 Nucleotide-binding C-terminal domain HF553_RS05770 PF07005 Sugar-binding N-terminal domain HF553_RS05775 PF00596 Class II Aldolase and Adducin N-terminal domain HF553_RS05780 PF01261 Xylose isomerase-like TIM barrel HF553_RS05785 PF01370 NAD dependent epimerase/dehydratase family HF553_RS05790 PF02447 GntP family permease HF553_RS05795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS05795 PF03466 LysR substrate binding domain HF553_RS05800 PF07690 Major Facilitator Superfamily HF553_RS05810 PF05188 MutS domain II HF553_RS05810 PF05192 MutS domain III HF553_RS05810 PF01624 MutS domain I HF553_RS05810 PF05190 MutS family domain IV HF553_RS05810 PF00488 MutS domain V HF553_RS05835 PF00149 Calcineurin-like phosphoesterase HF553_RS05875 PF04741 InvH outer membrane lipoprotein HF553_RS05880 PF12833 Helix-turn-helix domain HF553_RS05885 PF03958 Bacterial type II/III secretion system short domain HF553_RS05885 PF00263 Bacterial type II and III secretion system protein HF553_RS05890 PF07201 HrpJ-like domain HF553_RS05895 PF00771 FHIPEP family HF553_RS05900 PF03519 Invasion protein B family HF553_RS05905 PF18269 T3SS EscN ATPase C-terminal domain HF553_RS05905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HF553_RS05905 PF02874 ATP synthase alpha/beta family, beta-barrel domain HF553_RS05910 PF02090 Salmonella surface presentation of antigen gene type M protein HF553_RS05915 PF02510 Surface presentation of antigens protein HF553_RS05920 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HF553_RS05925 PF00813 FliP family HF553_RS05930 PF01313 Bacterial export proteins, family 3 HF553_RS05935 PF01311 Bacterial export proteins, family 1 HF553_RS05940 PF01312 FlhB HrpN YscU SpaS Family HF553_RS05945 PF07720 Tetratricopeptide repeat HF553_RS05950 PF16535 Type III cell invasion protein SipB HF553_RS05950 PF04888 Secretion system effector C (SseC) like family HF553_RS05955 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) HF553_RS05960 PF06511 Type III secretion systems tip complex components HF553_RS05965 PF09052 SipA N-terminal domain HF553_RS05970 PF00550 Phosphopantetheine attachment site HF553_RS05980 PF05932 Tir chaperone protein (CesT) family HF553_RS05985 PF03545 Yersinia virulence determinant (YopE) HF553_RS05985 PF00102 Protein-tyrosine phosphatase HF553_RS05985 PF09119 SicP binding HF553_RS05990 PF01464 Transglycosylase SLT domain HF553_RS05995 PF00486 Transcriptional regulatory protein, C terminal HF553_RS06000 PF12833 Helix-turn-helix domain HF553_RS06005 PF09480 Type III secretion system protein PrgH-EprH (PrgH) HF553_RS06010 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF HF553_RS06020 PF01514 Secretory protein of YscJ/FliF family HF553_RS06025 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) HF553_RS06040 PF12833 Helix-turn-helix domain HF553_RS06050 PF00950 ABC 3 transport family HF553_RS06055 PF00950 ABC 3 transport family HF553_RS06060 PF00005 ABC transporter HF553_RS06065 PF01297 Zinc-uptake complex component A periplasmic HF553_RS06070 PF11756 Nitrous oxide-stimulated promoter HF553_RS06075 PF01590 GAF domain HF553_RS06075 PF02954 Bacterial regulatory protein, Fis family HF553_RS06075 PF00158 Sigma-54 interaction domain HF553_RS06080 PF02769 AIR synthase related protein, C-terminal domain HF553_RS06080 PF00586 AIR synthase related protein, N-terminal domain HF553_RS06085 PF01924 Hydrogenase formation hypA family HF553_RS06090 PF01455 HupF/HypC family HF553_RS06095 PF02492 CobW/HypB/UreG, nucleotide-binding domain HF553_RS06100 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HF553_RS06105 PF11046 Transcriptional repressor of hyc and hyp operons HF553_RS06110 PF13247 4Fe-4S dicluster domain HF553_RS06115 PF00361 Proton-conducting membrane transporter HF553_RS06120 PF00146 NADH dehydrogenase HF553_RS06125 PF00374 Nickel-dependent hydrogenase HF553_RS06125 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HF553_RS06125 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HF553_RS06130 PF12838 4Fe-4S dicluster domain HF553_RS06135 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HF553_RS06140 PF07450 Formate hydrogenlyase maturation protein HycH HF553_RS06145 PF01750 Hydrogenase maturation protease HF553_RS06155 PF13247 4Fe-4S dicluster domain HF553_RS06155 PF12800 4Fe-4S binding domain HF553_RS06160 PF07503 HypF finger HF553_RS06160 PF01300 Telomere recombination HF553_RS06160 PF00708 Acylphosphatase HF553_RS06160 PF17788 HypF Kae1-like domain HF553_RS06165 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS06165 PF18113 Rubredoxin binding C-terminal domain HF553_RS06170 PF00301 Rubredoxin HF553_RS06170 PF00258 Flavodoxin HF553_RS06170 PF00753 Metallo-beta-lactamase superfamily HF553_RS06175 PF00158 Sigma-54 interaction domain HF553_RS06175 PF01590 GAF domain HF553_RS06180 PF01380 SIS domain HF553_RS06180 PF00571 CBS domain HF553_RS06185 PF00455 DeoR C terminal sensor domain HF553_RS06185 PF08220 DeoR-like helix-turn-helix domain HF553_RS06190 PF06923 Glucitol operon activator protein (GutM) HF553_RS06195 PF00106 short chain dehydrogenase HF553_RS06200 PF03829 PTS system glucitol/sorbitol-specific IIA component HF553_RS06205 PF07663 Sorbitol phosphotransferase enzyme II C-terminus HF553_RS06205 PF03612 Sorbitol phosphotransferase enzyme II N-terminus HF553_RS06210 PF03608 PTS system enzyme II sorbitol-specific factor HF553_RS06215 PF13406 Transglycosylase SLT domain HF553_RS06220 PF02464 Competence-damaged protein HF553_RS06225 PF00154 recA bacterial DNA recombination protein HF553_RS06230 PF02631 RecX family HF553_RS06235 PF02272 DHHA1 domain HF553_RS06235 PF01411 tRNA synthetases class II (A) HF553_RS06235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HF553_RS06240 PF02599 Global regulator protein family HF553_RS06270 PF13419 Haloacid dehalogenase-like hydrolase HF553_RS06275 PF09335 SNARE associated Golgi protein HF553_RS06280 PF04262 Glutamate-cysteine ligase HF553_RS06285 PF02664 S-Ribosylhomocysteinase (LuxS) HF553_RS06295 PF07690 Major Facilitator Superfamily HF553_RS06300 PF00529 HlyD membrane-fusion protein of T1SS HF553_RS06300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF553_RS06305 PF01047 MarR family HF553_RS06310 PF07690 Major Facilitator Superfamily HF553_RS06315 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HF553_RS06320 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS06325 PF00571 CBS domain HF553_RS06325 PF00005 ABC transporter HF553_RS06330 PF00268 Ribonucleotide reductase, small chain HF553_RS06335 PF02867 Ribonucleotide reductase, barrel domain HF553_RS06335 PF00317 Ribonucleotide reductase, all-alpha domain HF553_RS06335 PF08343 Ribonucleotide reductase N-terminal HF553_RS06340 PF07972 NrdI Flavodoxin like HF553_RS06345 PF00462 Glutaredoxin HF553_RS06350 PF02627 Carboxymuconolactone decarboxylase family HF553_RS06355 PF00155 Aminotransferase class I and II HF553_RS06355 PF00392 Bacterial regulatory proteins, gntR family HF553_RS06360 PF05957 Bacterial protein of unknown function (DUF883) HF553_RS06365 PF09400 Protein of unknown function (DUF2002) HF553_RS06370 PF06610 L-alanine exporter HF553_RS06375 PF00816 H-NS histone family HF553_RS06385 PF11127 Protein of unknown function (DUF2892) HF553_RS06385 PF00581 Rhodanese-like domain HF553_RS06390 PF01022 Bacterial regulatory protein, arsR family HF553_RS06395 PF01679 Proteolipid membrane potential modulator HF553_RS06400 PF01476 LysM domain HF553_RS06400 PF04972 BON domain HF553_RS06405 PF00392 Bacterial regulatory proteins, gntR family HF553_RS06405 PF07729 FCD domain HF553_RS06410 PF00324 Amino acid permease HF553_RS06415 PF00202 Aminotransferase class-III HF553_RS06420 PF00171 Aldehyde dehydrogenase family HF553_RS06425 PF01266 FAD dependent oxidoreductase HF553_RS06430 PF08943 CsiD HF553_RS06435 PF01970 Tripartite tricarboxylate transporter TctA family HF553_RS06450 PF00486 Transcriptional regulatory protein, C terminal HF553_RS06450 PF00072 Response regulator receiver domain HF553_RS06455 PF08521 Two-component sensor kinase N-terminal HF553_RS06455 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS06455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS06460 PF03824 High-affinity nickel-transport protein HF553_RS06470 PF04393 Protein of unknown function (DUF535) HF553_RS06475 PF00805 Pentapeptide repeats (8 copies) HF553_RS06485 PF00593 TonB dependent receptor HF553_RS06485 PF07715 TonB-dependent Receptor Plug Domain HF553_RS06490 PF00756 Putative esterase HF553_RS06500 PF00664 ABC transporter transmembrane region HF553_RS06500 PF00005 ABC transporter HF553_RS06505 PF06722 Protein of unknown function (DUF1205) HF553_RS06510 PF02796 Helix-turn-helix domain of resolvase HF553_RS06510 PF00239 Resolvase, N terminal domain HF553_RS06515 PF00700 Bacterial flagellin C-terminal helical region HF553_RS06515 PF08884 Flagellin D3 domain HF553_RS06515 PF00669 Bacterial flagellin N-terminal helical region HF553_RS06520 PF03614 Repressor of phase-1 flagellin HF553_RS06555 PF13356 Arm DNA-binding domain HF553_RS06555 PF00589 Phage integrase family HF553_RS06565 PF00529 HlyD membrane-fusion protein of T1SS HF553_RS06565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF553_RS06570 PF00664 ABC transporter transmembrane region HF553_RS06570 PF00005 ABC transporter HF553_RS06585 PF01668 SmpB protein HF553_RS06590 PF03364 Polyketide cyclase / dehydrase and lipid transport HF553_RS06595 PF03658 RnfH family Ubiquitin HF553_RS06600 PF04355 SmpA / OmlA family HF553_RS06605 PF02463 RecF/RecN/SMC N terminal domain HF553_RS06610 PF01513 ATP-NAD kinase HF553_RS06615 PF01025 GrpE HF553_RS06625 PF03471 Transporter associated domain HF553_RS06625 PF00571 CBS domain HF553_RS06625 PF01595 Cyclin M transmembrane N-terminal domain HF553_RS06630 PF01578 Cytochrome C assembly protein HF553_RS06635 PF02881 SRP54-type protein, helical bundle domain HF553_RS06635 PF02978 Signal peptide binding domain HF553_RS06635 PF00448 SRP54-type protein, GTPase domain HF553_RS06640 PF00886 Ribosomal protein S16 HF553_RS06645 PF05239 PRC-barrel domain HF553_RS06645 PF01782 RimM N-terminal domain HF553_RS06650 PF01746 tRNA (Guanine-1)-methyltransferase HF553_RS06655 PF01245 Ribosomal protein L19 HF553_RS06660 PF17152 Periplasmic sensor domain HF553_RS06660 PF00990 Diguanylate cyclase, GGDEF domain HF553_RS06665 PF13689 YfiR/HmsC-like HF553_RS06670 PF00793 DAHP synthetase I family HF553_RS06675 PF01817 Chorismate mutase type II HF553_RS06675 PF02153 Prephenate dehydrogenase HF553_RS06680 PF08450 SMP-30/Gluconolactonase/LRE-like region HF553_RS06685 PF00800 Prephenate dehydratase HF553_RS06685 PF01817 Chorismate mutase type II HF553_RS06695 PF00589 Phage integrase family HF553_RS06695 PF02899 Phage integrase, N-terminal SAM-like domain HF553_RS06825 PF07484 Phage Tail Collar Domain HF553_RS06825 PF03335 Phage tail fibre repeat HF553_RS06825 PF08400 Prophage tail fibre N-terminal HF553_RS06855 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HF553_RS06860 PF13525 Outer membrane lipoprotein HF553_RS06865 PF01479 S4 domain HF553_RS06865 PF00849 RNA pseudouridylate synthase HF553_RS06875 PF17871 AAA lid domain HF553_RS06875 PF02861 Clp amino terminal domain, pathogenicity island component HF553_RS06875 PF00004 ATPase family associated with various cellular activities (AAA) HF553_RS06875 PF10431 C-terminal, D2-small domain, of ClpB protein HF553_RS06875 PF07724 AAA domain (Cdc48 subfamily) HF553_RS06905 PF00083 Sugar (and other) transporter HF553_RS06910 PF10043 Predicted periplasmic lipoprotein (DUF2279) HF553_RS06915 PF13091 PLD-like domain HF553_RS06920 PF00583 Acetyltransferase (GNAT) family HF553_RS06920 PF13380 CoA binding domain HF553_RS06920 PF13607 Succinyl-CoA ligase like flavodoxin domain HF553_RS06930 PF00085 Thioredoxin HF553_RS06935 PF00588 SpoU rRNA Methylase family HF553_RS06935 PF08032 RNA 2'-O ribose methyltransferase substrate binding HF553_RS06940 PF03167 Uracil DNA glycosylase superfamily HF553_RS06945 PF01228 Glycine radical HF553_RS06950 PF01810 LysE type translocator HF553_RS06955 PF03466 LysR substrate binding domain HF553_RS06955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS06960 PF00270 DEAD/DEAH box helicase HF553_RS06960 PF00271 Helicase conserved C-terminal domain HF553_RS06965 PF05175 Methyltransferase small domain HF553_RS06970 PF02910 Fumarate reductase flavoprotein C-term HF553_RS06970 PF00890 FAD binding domain HF553_RS06980 PF08281 Sigma-70, region 4 HF553_RS06980 PF04542 Sigma-70 region 2 HF553_RS06985 PF03872 Anti sigma-E protein RseA, N-terminal domain HF553_RS06985 PF03873 Anti sigma-E protein RseA, C-terminal domain HF553_RS06990 PF03888 MucB/RseB N-terminal domain HF553_RS06990 PF17188 MucB/RseB C-terminal domain HF553_RS07000 PF03144 Elongation factor Tu domain 2 HF553_RS07000 PF00009 Elongation factor Tu GTP binding domain HF553_RS07000 PF00679 Elongation factor G C-terminus HF553_RS07000 PF06421 GTP-binding protein LepA C-terminus HF553_RS07005 PF10502 Signal peptidase, peptidase S26 HF553_RS07010 PF14622 Ribonuclease-III-like HF553_RS07010 PF00035 Double-stranded RNA binding motif HF553_RS07015 PF07650 KH domain HF553_RS07015 PF01926 50S ribosome-binding GTPase HF553_RS07020 PF02565 Recombination protein O C terminal HF553_RS07020 PF11967 Recombination protein O N terminal HF553_RS07025 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HF553_RS07030 PF01648 4'-phosphopantetheinyl transferase superfamily HF553_RS07035 PF12838 4Fe-4S dicluster domain HF553_RS07040 PF03466 LysR substrate binding domain HF553_RS07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS07045 PF07690 Major Facilitator Superfamily HF553_RS07050 PF08546 Ketopantoate reductase PanE/ApbA C terminal HF553_RS07050 PF02558 Ketopantoate reductase PanE/ApbA HF553_RS07055 PF01418 Helix-turn-helix domain, rpiR family HF553_RS07055 PF01380 SIS domain HF553_RS07060 PF01380 SIS domain HF553_RS07065 PF00367 phosphotransferase system, EIIB HF553_RS07065 PF02378 Phosphotransferase system, EIIC HF553_RS07075 PF14437 MafB19-like deaminase HF553_RS07080 PF01464 Transglycosylase SLT domain HF553_RS07080 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF553_RS07090 PF02769 AIR synthase related protein, C-terminal domain HF553_RS07090 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HF553_RS07090 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HF553_RS07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS07095 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS07100 PF13942 YfhG lipoprotein HF553_RS07105 PF00158 Sigma-54 interaction domain HF553_RS07105 PF00072 Response regulator receiver domain HF553_RS07110 PF00543 Nitrogen regulatory protein P-II HF553_RS07115 PF00854 POT family HF553_RS07120 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HF553_RS07120 PF01276 Orn/Lys/Arg decarboxylase, major domain HF553_RS07120 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HF553_RS07125 PF13520 Amino acid permease HF553_RS07130 PF00486 Transcriptional regulatory protein, C terminal HF553_RS07130 PF18500 CadC C-terminal domain 1 HF553_RS07140 PF00042 Globin HF553_RS07140 PF00970 Oxidoreductase FAD-binding domain HF553_RS07140 PF00175 Oxidoreductase NAD-binding domain HF553_RS07145 PF00464 Serine hydroxymethyltransferase HF553_RS07150 PF12832 MFS_1 like family HF553_RS07155 PF00874 PRD domain HF553_RS07165 PF03824 High-affinity nickel-transport protein HF553_RS07170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HF553_RS07170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HF553_RS07170 PF13187 4Fe-4S dicluster domain HF553_RS07175 PF00175 Oxidoreductase NAD-binding domain HF553_RS07175 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HF553_RS07185 PF12146 Serine aminopeptidase, S33 HF553_RS07190 PF00459 Inositol monophosphatase family HF553_RS07195 PF00588 SpoU rRNA Methylase family HF553_RS07200 PF02082 Transcriptional regulator HF553_RS07205 PF00266 Aminotransferase class-V HF553_RS07210 PF01592 NifU-like N terminal domain HF553_RS07215 PF01521 Iron-sulphur cluster biosynthesis HF553_RS07220 PF07743 HSCB C-terminal oligomerisation domain HF553_RS07225 PF00012 Hsp70 protein HF553_RS07230 PF00111 2Fe-2S iron-sulfur cluster binding domain HF553_RS07235 PF04384 Iron-sulphur cluster assembly HF553_RS07240 PF12404 Peptidase HF553_RS07240 PF00883 Cytosol aminopeptidase family, catalytic domain HF553_RS07245 PF14581 SseB protein C-terminal domain HF553_RS07245 PF07179 SseB protein N-terminal domain HF553_RS07255 PF00581 Rhodanese-like domain HF553_RS07260 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HF553_RS07260 PF00207 Alpha-2-macroglobulin family HF553_RS07260 PF17962 Bacterial macroglobulin domain 6 HF553_RS07260 PF07678 A-macroglobulin TED domain HF553_RS07260 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HF553_RS07260 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HF553_RS07260 PF01835 MG2 domain HF553_RS07260 PF07703 Alpha-2-macroglobulin bait region domain HF553_RS07260 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HF553_RS07265 PF06832 Penicillin-Binding Protein C-terminus Family HF553_RS07265 PF00905 Penicillin binding protein transpeptidase domain HF553_RS07265 PF00912 Transglycosylase HF553_RS07270 PF01568 Molydopterin dinucleotide binding domain HF553_RS07270 PF00384 Molybdopterin oxidoreductase HF553_RS07270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF553_RS07275 PF12800 4Fe-4S binding domain HF553_RS07275 PF13247 4Fe-4S dicluster domain HF553_RS07290 PF00334 Nucleoside diphosphate kinase HF553_RS07295 PF04055 Radical SAM superfamily HF553_RS07300 PF13464 Domain of unknown function (DUF4115) HF553_RS07305 PF04551 GcpE protein HF553_RS07310 PF13393 Histidyl-tRNA synthetase HF553_RS07310 PF03129 Anticodon binding domain HF553_RS07315 PF09976 Tetratricopeptide repeat-like domain HF553_RS07320 PF13360 PQQ-like domain HF553_RS07325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HF553_RS07325 PF01926 50S ribosome-binding GTPase HF553_RS07330 PF07191 zinc-ribbons HF553_RS07335 PF01476 LysM domain HF553_RS07335 PF07979 Intimin C-type lectin domain HF553_RS07335 PF02368 Bacterial Ig-like domain (group 2) HF553_RS07335 PF11924 Inverse autotransporter, beta-domain HF553_RS07335 PF02369 Bacterial Ig-like domain (group 1) HF553_RS07360 PF03797 Autotransporter beta-domain HF553_RS07365 PF02601 Exonuclease VII, large subunit HF553_RS07365 PF13742 OB-fold nucleic acid binding domain HF553_RS07370 PF00478 IMP dehydrogenase / GMP reductase domain HF553_RS07370 PF00571 CBS domain HF553_RS07375 PF02540 NAD synthase HF553_RS07375 PF00958 GMP synthase C terminal domain HF553_RS07375 PF00117 Glutamine amidotransferase class-I HF553_RS07380 PF01810 LysE type translocator HF553_RS07390 PF17358 Family of unknown function (DUF5384) HF553_RS07395 PF05433 Glycine zipper 2TM domain HF553_RS07400 PF11119 Protein of unknown function (DUF2633) HF553_RS07410 PF00563 EAL domain HF553_RS07410 PF05231 MASE1 HF553_RS07415 PF02541 Ppx/GppA phosphatase family HF553_RS07420 PF02503 Polyphosphate kinase middle domain HF553_RS07420 PF13089 Polyphosphate kinase N-terminal domain HF553_RS07420 PF13090 Polyphosphate kinase C-terminal domain 2 HF553_RS07420 PF17941 Polyphosphate kinase C-terminal domain 1 HF553_RS07425 PF00551 Formyl transferase HF553_RS07430 PF00586 AIR synthase related protein, N-terminal domain HF553_RS07430 PF02769 AIR synthase related protein, C-terminal domain HF553_RS07440 PF00860 Permease family HF553_RS07445 PF00308 Bacterial dnaA protein HF553_RS07450 PF03960 ArsC family HF553_RS07455 PF01435 Peptidase family M48 HF553_RS07460 PF01594 AI-2E family transporter HF553_RS07465 PF05651 Putative sugar diacid recognition HF553_RS07465 PF17853 GGDEF-like domain HF553_RS07465 PF13556 PucR C-terminal helix-turn-helix domain HF553_RS07470 PF02447 GntP family permease HF553_RS07475 PF02595 Glycerate kinase family HF553_RS07480 PF00578 AhpC/TSA family HF553_RS07485 PF01842 ACT domain HF553_RS07490 PF00701 Dihydrodipicolinate synthetase family HF553_RS07495 PF06804 NlpB/DapX lipoprotein HF553_RS07500 PF01259 SAICAR synthetase HF553_RS07505 PF04228 Putative neutral zinc metallopeptidase HF553_RS07510 PF05127 Helicase HF553_RS07510 PF13718 GNAT acetyltransferase 2 HF553_RS07510 PF08351 Domain of unknown function (DUF1726) HF553_RS07510 PF17176 tRNA-binding domain HF553_RS07515 PF13980 Uncharacterised protein family (UPF0370) HF553_RS07520 PF07687 Peptidase dimerisation domain HF553_RS07520 PF01546 Peptidase family M20/M25/M40 HF553_RS07525 PF03960 ArsC family HF553_RS07535 PF00873 AcrB/AcrD/AcrF family HF553_RS07540 PF07730 Histidine kinase HF553_RS07540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS07540 PF00672 HAMP domain HF553_RS07540 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HF553_RS07545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HF553_RS07545 PF13247 4Fe-4S dicluster domain HF553_RS07545 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS07550 PF00144 Beta-lactamase HF553_RS07555 PF00293 NUDIX domain HF553_RS07560 PF06674 Protein of unknown function (DUF1176) HF553_RS07570 PF02780 Transketolase, C-terminal domain HF553_RS07570 PF02779 Transketolase, pyrimidine binding domain HF553_RS07570 PF00456 Transketolase, thiamine diphosphate binding domain HF553_RS07575 PF00923 Transaldolase/Fructose-6-phosphate aldolase HF553_RS07580 PF01515 Phosphate acetyl/butaryl transferase HF553_RS07580 PF03949 Malic enzyme, NAD binding domain HF553_RS07580 PF00390 Malic enzyme, N-terminal domain HF553_RS07585 PF00936 BMC domain HF553_RS07590 PF10662 Ethanolamine utilisation - propanediol utilisation HF553_RS07595 PF06249 Ethanolamine utilisation protein EutQ HF553_RS07600 PF01923 Cobalamin adenosyltransferase HF553_RS07605 PF01515 Phosphate acetyl/butaryl transferase HF553_RS07610 PF00936 BMC domain HF553_RS07615 PF03319 Ethanolamine utilisation protein EutN/carboxysome HF553_RS07620 PF00171 Aldehyde dehydrogenase family HF553_RS07630 PF00465 Iron-containing alcohol dehydrogenase HF553_RS07635 PF04346 Ethanolamine utilisation protein, EutH HF553_RS07640 PF06277 Ethanolamine utilisation protein EutA HF553_RS07645 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HF553_RS07650 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HF553_RS07655 PF00936 BMC domain HF553_RS07660 PF00936 BMC domain HF553_RS07660 PF16365 Ethanolamine utilization protein EutK C-terminus HF553_RS07665 PF12833 Helix-turn-helix domain HF553_RS07670 PF01218 Coproporphyrinogen III oxidase HF553_RS07675 PF01520 N-acetylmuramoyl-L-alanine amidase HF553_RS07680 PF00583 Acetyltransferase (GNAT) family HF553_RS07685 PF11143 Protein of unknown function (DUF2919) HF553_RS07690 PF06572 Protein of unknown function (DUF1131) HF553_RS07695 PF04261 Dyp-type peroxidase family HF553_RS07710 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS07715 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS07720 PF00005 ABC transporter HF553_RS07725 PF00291 Pyridoxal-phosphate dependent enzyme HF553_RS07730 PF17263 Family of unknown function (DUF5329) HF553_RS07735 PF00117 Glutamine amidotransferase class-I HF553_RS07740 PF00392 Bacterial regulatory proteins, gntR family HF553_RS07740 PF00155 Aminotransferase class I and II HF553_RS07745 PF08543 Phosphomethylpyrimidine kinase HF553_RS07755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HF553_RS07760 PF00391 PEP-utilising enzyme, mobile domain HF553_RS07760 PF05524 PEP-utilising enzyme, N-terminal HF553_RS07760 PF02896 PEP-utilising enzyme, TIM barrel domain HF553_RS07765 PF00381 PTS HPr component phosphorylation site HF553_RS07770 PF00291 Pyridoxal-phosphate dependent enzyme HF553_RS07780 PF04354 ZipA, C-terminal FtsZ-binding domain HF553_RS07785 PF00533 BRCA1 C Terminus (BRCT) domain HF553_RS07785 PF01653 NAD-dependent DNA ligase adenylation domain HF553_RS07785 PF12826 Helix-hairpin-helix motif HF553_RS07785 PF03120 NAD-dependent DNA ligase OB-fold domain HF553_RS07785 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HF553_RS07790 PF12843 Putative quorum-sensing-regulated virulence factor HF553_RS07795 PF13593 SBF-like CPA transporter family (DUF4137) HF553_RS07800 PF03466 LysR substrate binding domain HF553_RS07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS07805 PF03502 Nucleoside-specific channel-forming protein, Tsx HF553_RS07810 PF01048 Phosphorylase superfamily HF553_RS07815 PF03825 Nucleoside H+ symporter HF553_RS07825 PF03466 LysR substrate binding domain HF553_RS07825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS07850 PF00749 tRNA synthetases class I (E and Q), catalytic domain HF553_RS07855 PF07037 Putative transcription regulator (DUF1323) HF553_RS07860 PF07037 Putative transcription regulator (DUF1323) HF553_RS07875 PF00563 EAL domain HF553_RS07875 PF05231 MASE1 HF553_RS07880 PF01773 Na+ dependent nucleoside transporter N-terminus HF553_RS07880 PF07670 Nucleoside recognition HF553_RS07880 PF07662 Na+ dependent nucleoside transporter C-terminus HF553_RS07885 PF01566 Natural resistance-associated macrophage protein HF553_RS07890 PF10697 Protein of unknown function (DUF2502) HF553_RS07895 PF00248 Aldo/keto reductase family HF553_RS07900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF553_RS07900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF553_RS07900 PF00205 Thiamine pyrophosphate enzyme, central domain HF553_RS07905 PF00654 Voltage gated chloride channel HF553_RS07910 PF02685 Glucokinase HF553_RS07920 PF00155 Aminotransferase class I and II HF553_RS07930 PF03279 Bacterial lipid A biosynthesis acyltransferase HF553_RS07935 PF10810 Protein of unknown function (DUF2545) HF553_RS07940 PF07690 Major Facilitator Superfamily HF553_RS07950 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS07950 PF00672 HAMP domain HF553_RS07955 PF02954 Bacterial regulatory protein, Fis family HF553_RS07955 PF00072 Response regulator receiver domain HF553_RS07955 PF14532 Sigma-54 interaction domain HF553_RS07960 PF01278 Omptin family HF553_RS07980 PF01757 Acyltransferase family HF553_RS07985 PF00535 Glycosyl transferase family 2 HF553_RS07990 PF04138 GtrA-like protein HF553_RS07995 PF13610 DDE domain HF553_RS08010 PF01226 Formate/nitrite transporter HF553_RS08015 PF04333 MlaA lipoprotein HF553_RS08020 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HF553_RS08025 PF04175 Protein of unknown function (DUF406) HF553_RS08030 PF00108 Thiolase, N-terminal domain HF553_RS08030 PF02803 Thiolase, C-terminal domain HF553_RS08035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HF553_RS08035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HF553_RS08035 PF00378 Enoyl-CoA hydratase/isomerase HF553_RS08040 PF00300 Histidine phosphatase superfamily (branch 1) HF553_RS08045 PF01713 Smr domain HF553_RS08050 PF05175 Methyltransferase small domain HF553_RS08055 PF01264 Chorismate synthase HF553_RS08060 PF03411 Penicillin-insensitive murein endopeptidase HF553_RS08065 PF01925 Sulfite exporter TauE/SafE HF553_RS08070 PF04315 Elongation factor P hydroxylase HF553_RS08075 PF08891 YfcL protein HF553_RS08080 PF01266 FAD dependent oxidoreductase HF553_RS08080 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HF553_RS08085 PF00109 Beta-ketoacyl synthase, N-terminal domain HF553_RS08085 PF02801 Beta-ketoacyl synthase, C-terminal domain HF553_RS08090 PF02517 CPBP intramembrane metalloprotease HF553_RS08110 PF07690 Major Facilitator Superfamily HF553_RS08120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF553_RS08120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF553_RS08120 PF11890 Domain of unknown function (DUF3410) HF553_RS08125 PF02774 Semialdehyde dehydrogenase, dimerisation domain HF553_RS08125 PF01118 Semialdehyde dehydrogenase, NAD binding domain HF553_RS08130 PF01416 tRNA pseudouridine synthase HF553_RS08135 PF09335 SNARE associated Golgi protein HF553_RS08140 PF17848 Acetyl-coA carboxylase zinc finger domain HF553_RS08140 PF01039 Carboxyl transferase domain HF553_RS08145 PF08245 Mur ligase middle domain HF553_RS08145 PF02875 Mur ligase family, glutamate ligase domain HF553_RS08150 PF05036 Sporulation related domain HF553_RS08155 PF02674 Colicin V production protein HF553_RS08160 PF00156 Phosphoribosyl transferase domain HF553_RS08165 PF13426 PAS domain HF553_RS08165 PF02954 Bacterial regulatory protein, Fis family HF553_RS08165 PF00158 Sigma-54 interaction domain HF553_RS08170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HF553_RS08170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HF553_RS08175 PF13520 Amino acid permease HF553_RS08180 PF01168 Alanine racemase, N-terminal domain HF553_RS08185 PF00324 Amino acid permease HF553_RS08190 PF02441 Flavoprotein HF553_RS08195 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF553_RS08200 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF553_RS08205 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS08210 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS08215 PF00005 ABC transporter HF553_RS08220 PF08338 Domain of unknown function (DUF1731) HF553_RS08220 PF01370 NAD dependent epimerase/dehydratase family HF553_RS08225 PF00043 Glutathione S-transferase, C-terminal domain HF553_RS08225 PF02798 Glutathione S-transferase, N-terminal domain HF553_RS08230 PF14834 Glutathione S-transferase, C-terminal domain HF553_RS08230 PF02798 Glutathione S-transferase, N-terminal domain HF553_RS08235 PF12850 Calcineurin-like phosphoesterase superfamily domain HF553_RS08240 PF00293 NUDIX domain HF553_RS08245 PF00356 Bacterial regulatory proteins, lacI family HF553_RS08250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HF553_RS08260 PF03611 PTS system sugar-specific permease component HF553_RS08265 PF00456 Transketolase, thiamine diphosphate binding domain HF553_RS08270 PF02780 Transketolase, C-terminal domain HF553_RS08270 PF02779 Transketolase, pyrimidine binding domain HF553_RS08270 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HF553_RS08275 PF03606 C4-dicarboxylate anaerobic carrier HF553_RS08280 PF07085 DRTGG domain HF553_RS08280 PF01515 Phosphate acetyl/butaryl transferase HF553_RS08285 PF00871 Acetokinase family HF553_RS08290 PF04217 Protein of unknown function, DUF412 HF553_RS08295 PF03887 YfbU domain HF553_RS08300 PF13419 Haloacid dehalogenase-like hydrolase HF553_RS08305 PF03600 Citrate transporter HF553_RS08305 PF02080 TrkA-C domain HF553_RS08315 PF00155 Aminotransferase class I and II HF553_RS08320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS08320 PF03466 LysR substrate binding domain HF553_RS08330 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HF553_RS08335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HF553_RS08340 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HF553_RS08340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HF553_RS08350 PF10531 SLBB domain HF553_RS08350 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HF553_RS08350 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HF553_RS08355 PF01568 Molydopterin dinucleotide binding domain HF553_RS08355 PF00384 Molybdopterin oxidoreductase HF553_RS08355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF553_RS08355 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HF553_RS08360 PF00146 NADH dehydrogenase HF553_RS08365 PF12838 4Fe-4S dicluster domain HF553_RS08370 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HF553_RS08375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HF553_RS08380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HF553_RS08380 PF00361 Proton-conducting membrane transporter HF553_RS08385 PF00361 Proton-conducting membrane transporter HF553_RS08390 PF00361 Proton-conducting membrane transporter HF553_RS08395 PF01584 CheW-like domain HF553_RS08395 PF00072 Response regulator receiver domain HF553_RS08400 PF12706 Beta-lactamase superfamily domain HF553_RS08405 PF13673 Acetyltransferase (GNAT) domain HF553_RS08410 PF05957 Bacterial protein of unknown function (DUF883) HF553_RS08415 PF00425 chorismate binding enzyme HF553_RS08420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF553_RS08420 PF16582 Middle domain of thiamine pyrophosphate HF553_RS08420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF553_RS08425 PF12697 Alpha/beta hydrolase family HF553_RS08430 PF00378 Enoyl-CoA hydratase/isomerase HF553_RS08435 PF13378 Enolase C-terminal domain-like HF553_RS08440 PF13193 AMP-binding enzyme C-terminal domain HF553_RS08440 PF00501 AMP-binding enzyme HF553_RS08455 PF00892 EamA-like transporter family HF553_RS08460 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HF553_RS08465 PF01522 Polysaccharide deacetylase HF553_RS08470 PF02911 Formyl transferase, C-terminal domain HF553_RS08470 PF00551 Formyl transferase HF553_RS08470 PF01370 NAD dependent epimerase/dehydratase family HF553_RS08475 PF00535 Glycosyl transferase family 2 HF553_RS08480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HF553_RS08485 PF00300 Histidine phosphatase superfamily (branch 1) HF553_RS08490 PF00293 NUDIX domain HF553_RS08495 PF07437 YfaZ precursor HF553_RS08500 PF00994 Probable molybdopterin binding domain HF553_RS08510 PF13183 4Fe-4S dicluster domain HF553_RS08510 PF02754 Cysteine-rich domain HF553_RS08515 PF00890 FAD binding domain HF553_RS08520 PF01266 FAD dependent oxidoreductase HF553_RS08520 PF04324 BFD-like [2Fe-2S] binding domain HF553_RS08525 PF07690 Major Facilitator Superfamily HF553_RS08530 PF03009 Glycerophosphoryl diester phosphodiesterase family HF553_RS08535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS08535 PF03466 LysR substrate binding domain HF553_RS08540 PF07690 Major Facilitator Superfamily HF553_RS08545 PF00111 2Fe-2S iron-sulfur cluster binding domain HF553_RS08550 PF00268 Ribonucleotide reductase, small chain HF553_RS08555 PF02867 Ribonucleotide reductase, barrel domain HF553_RS08555 PF03477 ATP cone domain HF553_RS08555 PF00317 Ribonucleotide reductase, all-alpha domain HF553_RS08570 PF07690 Major Facilitator Superfamily HF553_RS08590 PF00521 DNA gyrase/topoisomerase IV, subunit A HF553_RS08590 PF03989 DNA gyrase C-terminal domain, beta-propeller HF553_RS08595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS08595 PF00072 Response regulator receiver domain HF553_RS08595 PF09456 RcsC Alpha-Beta-Loop (ABL) HF553_RS08595 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS08600 PF00196 Bacterial regulatory proteins, luxR family HF553_RS08600 PF00072 Response regulator receiver domain HF553_RS08605 PF16359 RcsD-ABL domain HF553_RS08605 PF01627 Hpt domain HF553_RS08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS08610 PF00267 Gram-negative porin HF553_RS08615 PF02424 ApbE family HF553_RS08620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HF553_RS08620 PF02805 Metal binding domain of Ada HF553_RS08620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HF553_RS08620 PF12833 Helix-turn-helix domain HF553_RS08625 PF13532 2OG-Fe(II) oxygenase superfamily HF553_RS08630 PF00005 ABC transporter HF553_RS08635 PF03974 Ecotin HF553_RS08640 PF13187 4Fe-4S dicluster domain HF553_RS08640 PF12800 4Fe-4S binding domain HF553_RS08640 PF00037 4Fe-4S binding domain HF553_RS08645 PF03927 NapD protein HF553_RS08650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF553_RS08650 PF00384 Molybdopterin oxidoreductase HF553_RS08650 PF01568 Molydopterin dinucleotide binding domain HF553_RS08655 PF12838 4Fe-4S dicluster domain HF553_RS08655 PF12800 4Fe-4S binding domain HF553_RS08660 PF13237 4Fe-4S dicluster domain HF553_RS08660 PF12801 4Fe-4S binding domain HF553_RS08665 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HF553_RS08670 PF03264 NapC/NirT cytochrome c family, N-terminal region HF553_RS08675 PF00005 ABC transporter HF553_RS08680 PF03379 CcmB protein HF553_RS08685 PF01578 Cytochrome C assembly protein HF553_RS08690 PF04995 Heme exporter protein D (CcmD) HF553_RS08695 PF03100 CcmE HF553_RS08700 PF01578 Cytochrome C assembly protein HF553_RS08700 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HF553_RS08705 PF08534 Redoxin HF553_RS08710 PF03918 Cytochrome C biogenesis protein HF553_RS08715 PF00072 Response regulator receiver domain HF553_RS08715 PF00196 Bacterial regulatory proteins, luxR family HF553_RS08755 PF00884 Sulfatase HF553_RS08755 PF11893 Domain of unknown function (DUF3413) HF553_RS08760 PF07208 Protein of unknown function (DUF1414) HF553_RS08765 PF04245 37-kD nucleoid-associated bacterial protein HF553_RS08775 PF01386 Ribosomal L25p family HF553_RS08780 PF04851 Type III restriction enzyme, res subunit HF553_RS08780 PF00271 Helicase conserved C-terminal domain HF553_RS08785 PF00849 RNA pseudouridylate synthase HF553_RS08785 PF01479 S4 domain HF553_RS08790 PF07690 Major Facilitator Superfamily HF553_RS08795 PF13989 YejG-like protein HF553_RS08800 PF00005 ABC transporter HF553_RS08800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF553_RS08805 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS08805 PF12911 N-terminal TM domain of oligopeptide transport permease C HF553_RS08810 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS08815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF553_RS08820 PF00563 EAL domain HF553_RS08820 PF12792 CSS motif domain associated with EAL HF553_RS08825 PF00877 NlpC/P60 family HF553_RS08830 PF01569 PAP2 superfamily HF553_RS08835 PF07683 Cobalamin synthesis protein cobW C-terminal domain HF553_RS08835 PF02492 CobW/HypB/UreG, nucleotide-binding domain HF553_RS08840 PF08207 Elongation factor P (EF-P) KOW-like domain HF553_RS08840 PF01132 Elongation factor P (EF-P) OB domain HF553_RS08840 PF09285 Elongation factor P, C-terminal HF553_RS08845 PF03692 Putative zinc- or iron-chelating domain HF553_RS08860 PF07690 Major Facilitator Superfamily HF553_RS08865 PF00381 PTS HPr component phosphorylation site HF553_RS08865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HF553_RS08870 PF00294 pfkB family carbohydrate kinase HF553_RS08875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HF553_RS08875 PF02378 Phosphotransferase system, EIIC HF553_RS08880 PF01261 Xylose isomerase-like TIM barrel HF553_RS08885 PF03601 Conserved hypothetical protein 698 HF553_RS08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS08890 PF03466 LysR substrate binding domain HF553_RS08895 PF00324 Amino acid permease HF553_RS08900 PF07715 TonB-dependent Receptor Plug Domain HF553_RS08900 PF00593 TonB dependent receptor HF553_RS08905 PF07690 Major Facilitator Superfamily HF553_RS08910 PF18429 Domain of unknown function (DUF5609) HF553_RS08915 PF03313 Serine dehydratase alpha chain HF553_RS08915 PF03315 Serine dehydratase beta chain HF553_RS08925 PF00756 Putative esterase HF553_RS08930 PF01227 GTP cyclohydrolase I HF553_RS08935 PF04235 Protein of unknown function (DUF418) HF553_RS08940 PF00356 Bacterial regulatory proteins, lacI family HF553_RS08945 PF13407 Periplasmic binding protein domain HF553_RS08950 PF00005 ABC transporter HF553_RS08955 PF02653 Branched-chain amino acid transport system / permease component HF553_RS08960 PF01180 Dihydroorotate dehydrogenase HF553_RS08965 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS08965 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HF553_RS08970 PF10808 Protein of unknown function (DUF2542) HF553_RS08975 PF02698 DUF218 domain HF553_RS08980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HF553_RS08980 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HF553_RS08985 PF04172 LrgB-like family HF553_RS08990 PF03788 LrgA family HF553_RS08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS08995 PF03466 LysR substrate binding domain HF553_RS09000 PF07690 Major Facilitator Superfamily HF553_RS09005 PF07883 Cupin domain HF553_RS09010 PF01557 Fumarylacetoacetate (FAA) hydrolase family HF553_RS09015 PF02798 Glutathione S-transferase, N-terminal domain HF553_RS09015 PF14497 Glutathione S-transferase, C-terminal domain HF553_RS09020 PF01494 FAD binding domain HF553_RS09025 PF01207 Dihydrouridine synthase (Dus) HF553_RS09035 PF02321 Outer membrane efflux protein HF553_RS09045 PF09335 SNARE associated Golgi protein HF553_RS09050 PF04893 Yip1 domain HF553_RS09055 PF00768 D-alanyl-D-alanine carboxypeptidase HF553_RS09060 PF09330 D-lactate dehydrogenase, membrane binding HF553_RS09060 PF01565 FAD binding domain HF553_RS09065 PF00933 Glycosyl hydrolase family 3 N terminal domain HF553_RS09065 PF14310 Fibronectin type III-like domain HF553_RS09065 PF01915 Glycosyl hydrolase family 3 C-terminal domain HF553_RS09070 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HF553_RS09075 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS09080 PF00005 ABC transporter HF553_RS09085 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS09095 PF13411 MerR HTH family regulatory protein HF553_RS09100 PF07694 5TMR of 5TMR-LYT HF553_RS09100 PF06580 Histidine kinase HF553_RS09105 PF04397 LytTr DNA-binding domain HF553_RS09105 PF00072 Response regulator receiver domain HF553_RS09110 PF07308 Protein of unknown function (DUF1456) HF553_RS09120 PF06998 Protein of unknown function (DUF1307) HF553_RS09125 PF01588 Putative tRNA binding domain HF553_RS09125 PF09334 tRNA synthetases class I (M) HF553_RS09130 PF10609 NUBPL iron-transfer P-loop NTPase HF553_RS09145 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS09145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS09150 PF13954 PapC N-terminal domain HF553_RS09150 PF13953 PapC C-terminal domain HF553_RS09150 PF00577 Outer membrane usher protein HF553_RS09160 PF11776 Nickel/cobalt transporter regulator HF553_RS09165 PF02110 Hydroxyethylthiazole kinase family HF553_RS09170 PF08543 Phosphomethylpyrimidine kinase HF553_RS09175 PF00392 Bacterial regulatory proteins, gntR family HF553_RS09175 PF07702 UTRA domain HF553_RS09180 PF00294 pfkB family carbohydrate kinase HF553_RS09185 PF03747 ADP-ribosylglycohydrolase HF553_RS09190 PF03825 Nucleoside H+ symporter HF553_RS09195 PF01791 DeoC/LacD family aldolase HF553_RS09200 PF00781 Diacylglycerol kinase catalytic domain HF553_RS09210 PF05932 Tir chaperone protein (CesT) family HF553_RS09245 PF03527 RHS protein HF553_RS09260 PF05593 RHS Repeat HF553_RS09260 PF03527 RHS protein HF553_RS09260 PF14220 Domain of unknown function (DUF4329) HF553_RS09265 PF15606 Bacterial toxin 34 HF553_RS09265 PF03527 RHS protein HF553_RS09265 PF05593 RHS Repeat HF553_RS09275 PF03130 PBS lyase HEAT-like repeat HF553_RS09295 PF12759 InsA C-terminal domain HF553_RS09295 PF03811 InsA N-terminal domain HF553_RS09325 PF00486 Transcriptional regulatory protein, C terminal HF553_RS09325 PF00072 Response regulator receiver domain HF553_RS09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS09330 PF00672 HAMP domain HF553_RS09330 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS09335 PF07690 Major Facilitator Superfamily HF553_RS09340 PF00873 AcrB/AcrD/AcrF family HF553_RS09345 PF00873 AcrB/AcrD/AcrF family HF553_RS09350 PF13533 Biotin-lipoyl like HF553_RS09360 PF00012 Hsp70 protein HF553_RS09365 PF06029 AlkA N-terminal domain HF553_RS09365 PF00730 HhH-GPD superfamily base excision DNA repair protein HF553_RS09370 PF00563 EAL domain HF553_RS09370 PF00990 Diguanylate cyclase, GGDEF domain HF553_RS09370 PF05231 MASE1 HF553_RS09370 PF08448 PAS fold HF553_RS09370 PF13426 PAS domain HF553_RS09370 PF08447 PAS fold HF553_RS09375 PF00485 Phosphoribulokinase / Uridine kinase family HF553_RS09380 PF00692 dUTPase HF553_RS09385 PF05170 AsmA family HF553_RS09390 PF00571 CBS domain HF553_RS09390 PF03741 Integral membrane protein TerC family HF553_RS09390 PF03471 Transporter associated domain HF553_RS09395 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HF553_RS09395 PF02563 Polysaccharide biosynthesis/export protein HF553_RS09395 PF10531 SLBB domain HF553_RS09400 PF01451 Low molecular weight phosphotyrosine protein phosphatase HF553_RS09405 PF02706 Chain length determinant protein HF553_RS09405 PF13614 AAA domain HF553_RS09405 PF13807 G-rich domain on putative tyrosine kinase HF553_RS09410 PF00535 Glycosyl transferase family 2 HF553_RS09415 PF00132 Bacterial transferase hexapeptide (six repeats) HF553_RS09420 PF00534 Glycosyl transferases group 1 HF553_RS09420 PF13439 Glycosyltransferase Family 4 HF553_RS09430 PF00535 Glycosyl transferase family 2 HF553_RS09435 PF00132 Bacterial transferase hexapeptide (six repeats) HF553_RS09440 PF16363 GDP-mannose 4,6 dehydratase HF553_RS09445 PF01370 NAD dependent epimerase/dehydratase family HF553_RS09450 PF00293 NUDIX domain HF553_RS09455 PF13579 Glycosyl transferase 4-like domain HF553_RS09455 PF00534 Glycosyl transferases group 1 HF553_RS09460 PF01050 Mannose-6-phosphate isomerase HF553_RS09460 PF00483 Nucleotidyl transferase HF553_RS09465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HF553_RS09465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HF553_RS09465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HF553_RS09465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HF553_RS09470 PF02397 Bacterial sugar transferase HF553_RS09480 PF04230 Polysaccharide pyruvyl transferase HF553_RS09485 PF00534 Glycosyl transferases group 1 HF553_RS09485 PF13439 Glycosyltransferase Family 4 HF553_RS09495 PF00483 Nucleotidyl transferase HF553_RS09500 PF16363 GDP-mannose 4,6 dehydratase HF553_RS09505 PF04321 RmlD substrate binding domain HF553_RS09510 PF00483 Nucleotidyl transferase HF553_RS09515 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HF553_RS09520 PF00970 Oxidoreductase FAD-binding domain HF553_RS09520 PF00111 2Fe-2S iron-sulfur cluster binding domain HF553_RS09520 PF00175 Oxidoreductase NAD-binding domain HF553_RS09525 PF00483 Nucleotidyl transferase HF553_RS09530 PF16363 GDP-mannose 4,6 dehydratase HF553_RS09535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HF553_RS09540 PF01370 NAD dependent epimerase/dehydratase family HF553_RS09550 PF00535 Glycosyl transferase family 2 HF553_RS09555 PF13439 Glycosyltransferase Family 4 HF553_RS09555 PF00534 Glycosyl transferases group 1 HF553_RS09560 PF00535 Glycosyl transferase family 2 HF553_RS09565 PF00483 Nucleotidyl transferase HF553_RS09565 PF01050 Mannose-6-phosphate isomerase HF553_RS09570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HF553_RS09570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HF553_RS09570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HF553_RS09570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HF553_RS09575 PF02397 Bacterial sugar transferase HF553_RS09580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF553_RS09580 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HF553_RS09585 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HF553_RS09585 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HF553_RS09590 PF02706 Chain length determinant protein HF553_RS09595 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HF553_RS09595 PF01502 Phosphoribosyl-AMP cyclohydrolase HF553_RS09600 PF00977 Histidine biosynthesis protein HF553_RS09605 PF00977 Histidine biosynthesis protein HF553_RS09610 PF00117 Glutamine amidotransferase class-I HF553_RS09615 PF00475 Imidazoleglycerol-phosphate dehydratase HF553_RS09620 PF00155 Aminotransferase class I and II HF553_RS09625 PF00815 Histidinol dehydrogenase HF553_RS09630 PF01634 ATP phosphoribosyltransferase HF553_RS09630 PF08029 HisG, C-terminal domain HF553_RS09640 PF01370 NAD dependent epimerase/dehydratase family HF553_RS09645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS09645 PF03466 LysR substrate binding domain HF553_RS09655 PF13520 Amino acid permease HF553_RS09660 PF00929 Exonuclease HF553_RS09660 PF08411 Exonuclease C-terminal HF553_RS09665 PF13981 SopA-like central domain HF553_RS09665 PF13979 SopA-like catalytic domain HF553_RS09675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF553_RS09675 PF00384 Molybdopterin oxidoreductase HF553_RS09675 PF01568 Molydopterin dinucleotide binding domain HF553_RS09680 PF12800 4Fe-4S binding domain HF553_RS09680 PF13247 4Fe-4S dicluster domain HF553_RS09685 PF01292 Prokaryotic cytochrome b561 HF553_RS09690 PF00768 D-alanyl-D-alanine carboxypeptidase HF553_RS09690 PF07943 Penicillin-binding protein 5, C-terminal domain HF553_RS09695 PF06445 GyrI-like small molecule binding domain HF553_RS09700 PF04632 Fusaric acid resistance protein family HF553_RS09705 PF04363 Protein of unknown function (DUF496) HF553_RS09710 PF00288 GHMP kinases N terminal domain HF553_RS09715 PF00871 Acetokinase family HF553_RS09720 PF10662 Ethanolamine utilisation - propanediol utilisation HF553_RS09725 PF00936 BMC domain HF553_RS09735 PF10531 SLBB domain HF553_RS09735 PF13375 RnfC Barrel sandwich hybrid domain HF553_RS09735 PF13237 4Fe-4S dicluster domain HF553_RS09735 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HF553_RS09740 PF00171 Aldehyde dehydrogenase family HF553_RS09740 PF00465 Iron-containing alcohol dehydrogenase HF553_RS09745 PF00171 Aldehyde dehydrogenase family HF553_RS09750 PF01923 Cobalamin adenosyltransferase HF553_RS09755 PF03319 Ethanolamine utilisation protein EutN/carboxysome HF553_RS09765 PF06130 Phosphate propanoyltransferase HF553_RS09770 PF00936 BMC domain HF553_RS09775 PF00936 BMC domain HF553_RS09785 PF08841 Diol dehydratase reactivase ATPase-like domain HF553_RS09785 PF18427 DD-reactivating factor swiveling domain HF553_RS09790 PF02287 Dehydratase small subunit HF553_RS09795 PF02288 Dehydratase medium subunit HF553_RS09800 PF02286 Dehydratase large subunit HF553_RS09805 PF00936 BMC domain HF553_RS09810 PF00936 BMC domain HF553_RS09815 PF00230 Major intrinsic protein HF553_RS09820 PF10114 Sensory domain found in PocR HF553_RS09820 PF12833 Helix-turn-helix domain HF553_RS09825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HF553_RS09825 PF07685 CobB/CobQ-like glutamine amidotransferase domain HF553_RS09830 PF03186 CobD/Cbib protein HF553_RS09835 PF02570 Precorrin-8X methylmutase HF553_RS09840 PF01888 CbiD HF553_RS09845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HF553_RS09850 PF05175 Methyltransferase small domain HF553_RS09855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HF553_RS09860 PF11760 Cobalamin synthesis G N-terminal HF553_RS09860 PF11761 Cobalamin biosynthesis central region HF553_RS09860 PF01890 Cobalamin synthesis G C-terminus HF553_RS09865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HF553_RS09870 PF02571 Precorrin-6x reductase CbiJ/CobK HF553_RS09875 PF06180 Cobalt chelatase (CbiK) HF553_RS09880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HF553_RS09885 PF01891 Cobalt uptake substrate-specific transmembrane region HF553_RS09890 PF02553 Cobalt transport protein component CbiN HF553_RS09895 PF02361 Cobalt transport protein HF553_RS09900 PF00005 ABC transporter HF553_RS09905 PF07685 CobB/CobQ-like glutamine amidotransferase domain HF553_RS09910 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HF553_RS09915 PF02654 Cobalamin-5-phosphate synthase HF553_RS09920 PF02277 Phosphoribosyltransferase HF553_RS09925 PF03734 L,D-transpeptidase catalytic domain HF553_RS09925 PF17969 L,D-transpeptidase C-terminal domain HF553_RS09935 PF01554 MatE HF553_RS09945 PF13356 Arm DNA-binding domain HF553_RS09945 PF00589 Phage integrase family HF553_RS09955 PF13693 Winged helix-turn-helix DNA-binding HF553_RS09990 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus HF553_RS09990 PF01048 Phosphorylase superfamily HF553_RS09995 PF02525 Flavodoxin-like fold HF553_RS10000 PF01638 HxlR-like helix-turn-helix HF553_RS10025 PF06167 Glucose-regulated metallo-peptidase M90 HF553_RS10060 PF00816 H-NS histone family HF553_RS10135 PF04917 Bacterial shufflon protein, N-terminal constant region HF553_RS10160 PF13476 AAA domain HF553_RS10170 PF00589 Phage integrase family HF553_RS10170 PF13356 Arm DNA-binding domain HF553_RS10180 PF00717 Peptidase S24-like HF553_RS10185 PF00817 impB/mucB/samB family HF553_RS10185 PF13438 Domain of unknown function (DUF4113) HF553_RS10185 PF11799 impB/mucB/samB family C-terminal domain HF553_RS10190 PF00313 'Cold-shock' DNA-binding domain HF553_RS10200 PF00267 Gram-negative porin HF553_RS10210 PF01966 HD domain HF553_RS10215 PF00145 C-5 cytosine-specific DNA methylase HF553_RS10215 PF18284 DNA methylase N-terminal domain HF553_RS10220 PF03852 DNA mismatch endonuclease Vsr HF553_RS10225 PF00892 EamA-like transporter family HF553_RS10230 PF05661 Protein of unknown function (DUF808) HF553_RS10235 PF09926 Uncharacterized small protein (DUF2158) HF553_RS10240 PF00990 Diguanylate cyclase, GGDEF domain HF553_RS10240 PF17151 Periplasmic sensor domain HF553_RS10250 PF10733 Protein of unknown function (DUF2525) HF553_RS10255 PF10781 Dextransucrase DSRB HF553_RS10260 PF00196 Bacterial regulatory proteins, luxR family HF553_RS10265 PF01311 Bacterial export proteins, family 1 HF553_RS10270 PF01313 Bacterial export proteins, family 3 HF553_RS10275 PF00813 FliP family HF553_RS10280 PF04347 Flagellar biosynthesis protein, FliO HF553_RS10285 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HF553_RS10285 PF16973 Flagellar motor switch protein FliN N-terminal HF553_RS10290 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HF553_RS10290 PF02154 Flagellar motor switch protein FliM HF553_RS10295 PF03748 Flagellar basal body-associated protein FliL HF553_RS10300 PF02120 Flagellar hook-length control protein FliK HF553_RS10305 PF02050 Flagellar FliJ protein HF553_RS10310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HF553_RS10310 PF18269 T3SS EscN ATPase C-terminal domain HF553_RS10315 PF02108 Flagellar assembly protein FliH HF553_RS10320 PF14841 FliG middle domain HF553_RS10320 PF01706 FliG C-terminal domain HF553_RS10320 PF14842 FliG N-terminal domain HF553_RS10325 PF01514 Secretory protein of YscJ/FliF family HF553_RS10325 PF08345 Flagellar M-ring protein C-terminal HF553_RS10330 PF02049 Flagellar hook-basal body complex protein FliE HF553_RS10340 PF01206 Sulfurtransferase TusA HF553_RS10345 PF04143 Sulphur transport HF553_RS10350 PF13987 YedD-like protein HF553_RS10355 PF02806 Alpha amylase, C-terminal all-beta domain HF553_RS10355 PF00128 Alpha amylase, catalytic domain HF553_RS10360 PF05400 Flagellar protein FliT HF553_RS10365 PF02561 Flagellar protein FliS HF553_RS10370 PF07195 Flagellar hook-associated protein 2 C-terminus HF553_RS10370 PF07196 Flagellin hook IN motif HF553_RS10370 PF02465 Flagellar hook-associated protein 2 N-terminus HF553_RS10375 PF00669 Bacterial flagellin N-terminal helical region HF553_RS10375 PF08884 Flagellin D3 domain HF553_RS10375 PF00700 Bacterial flagellin C-terminal helical region HF553_RS10385 PF04545 Sigma-70, region 4 HF553_RS10385 PF04539 Sigma-70 region 3 HF553_RS10385 PF04542 Sigma-70 region 2 HF553_RS10390 PF02899 Phage integrase, N-terminal SAM-like domain HF553_RS10400 PF00291 Pyridoxal-phosphate dependent enzyme HF553_RS10415 PF00196 Bacterial regulatory proteins, luxR family HF553_RS10415 PF03472 Autoinducer binding domain HF553_RS10420 PF10769 Protein of unknown function (DUF2594) HF553_RS10430 PF00196 Bacterial regulatory proteins, luxR family HF553_RS10430 PF00072 Response regulator receiver domain HF553_RS10435 PF01541 GIY-YIG catalytic domain HF553_RS10435 PF02151 UvrB/uvrC motif HF553_RS10435 PF08459 UvrC Helix-hairpin-helix N-terminal HF553_RS10440 PF01066 CDP-alcohol phosphatidyltransferase HF553_RS10475 PF03695 Uncharacterised protein family (UPF0149) HF553_RS10475 PF02810 SEC-C motif HF553_RS10480 PF03222 Tryptophan/tyrosine permease family HF553_RS10485 PF10678 Protein of unknown function (DUF2492) HF553_RS10490 PF00210 Ferritin-like domain HF553_RS10495 PF13992 YecR-like lipoprotein HF553_RS10505 PF00210 Ferritin-like domain HF553_RS10520 PF02358 Trehalose-phosphatase HF553_RS10525 PF00982 Glycosyltransferase family 20 HF553_RS10530 PF00582 Universal stress protein family HF553_RS10540 PF05247 Flagellar transcriptional activator (FlhD) HF553_RS10545 PF05280 Flagellar transcriptional activator (FlhC) HF553_RS10550 PF01618 MotA/TolQ/ExbB proton channel family HF553_RS10555 PF00691 OmpA family HF553_RS10555 PF13677 Membrane MotB of proton-channel complex MotA/MotB HF553_RS10560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS10560 PF01584 CheW-like domain HF553_RS10560 PF02895 Signal transducing histidine kinase, homodimeric domain HF553_RS10560 PF01627 Hpt domain HF553_RS10560 PF09078 CheY binding HF553_RS10565 PF01584 CheW-like domain HF553_RS10570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF553_RS10570 PF00672 HAMP domain HF553_RS10570 PF02203 Tar ligand binding domain homologue HF553_RS10575 PF01739 CheR methyltransferase, SAM binding domain HF553_RS10575 PF03705 CheR methyltransferase, all-alpha domain HF553_RS10580 PF00072 Response regulator receiver domain HF553_RS10580 PF01339 CheB methylesterase HF553_RS10585 PF00072 Response regulator receiver domain HF553_RS10590 PF04344 Chemotaxis phosphatase, CheZ HF553_RS10595 PF01312 FlhB HrpN YscU SpaS Family HF553_RS10600 PF00771 FHIPEP family HF553_RS10605 PF06366 Flagellar protein FlhE HF553_RS10610 PF07470 Glycosyl Hydrolase Family 88 HF553_RS10615 PF03717 Penicillin-binding Protein dimerisation domain HF553_RS10615 PF00905 Penicillin binding protein transpeptidase domain HF553_RS10620 PF05746 DALR anticodon binding domain HF553_RS10620 PF00750 tRNA synthetases class I (R) HF553_RS10620 PF03485 Arginyl tRNA synthetase N terminal domain HF553_RS10625 PF06185 YecM protein HF553_RS10630 PF03932 CutC family HF553_RS10635 PF08003 Protein of unknown function (DUF1698) HF553_RS10640 PF13649 Methyltransferase domain HF553_RS10645 PF01124 MAPEG family HF553_RS10650 PF01904 Protein of unknown function DUF72 HF553_RS10655 PF00857 Isochorismatase family HF553_RS10660 PF00152 tRNA synthetases class II (D, K and N) HF553_RS10660 PF01336 OB-fold nucleic acid binding domain HF553_RS10660 PF02938 GAD domain HF553_RS10665 PF00293 NUDIX domain HF553_RS10670 PF01709 Transcriptional regulator HF553_RS10675 PF02075 Crossover junction endodeoxyribonuclease RuvC HF553_RS10680 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HF553_RS10690 PF07499 RuvA, C-terminal domain HF553_RS10690 PF01330 RuvA N terminal domain HF553_RS10695 PF05496 Holliday junction DNA helicase RuvB P-loop domain HF553_RS10695 PF05491 RuvB C-terminal winged helix domain HF553_RS10695 PF17864 RuvB AAA lid domain HF553_RS10700 PF00950 ABC 3 transport family HF553_RS10705 PF00005 ABC transporter HF553_RS10710 PF01297 Zinc-uptake complex component A periplasmic HF553_RS10715 PF01476 LysM domain HF553_RS10715 PF01551 Peptidase family M23 HF553_RS10715 PF08525 Opacity-associated protein A N-terminal motif HF553_RS10720 PF03279 Bacterial lipid A biosynthesis acyltransferase HF553_RS10725 PF02887 Pyruvate kinase, alpha/beta domain HF553_RS10725 PF00224 Pyruvate kinase, barrel domain HF553_RS10730 PF01418 Helix-turn-helix domain, rpiR family HF553_RS10730 PF01380 SIS domain HF553_RS10735 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HF553_RS10735 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HF553_RS10740 PF00920 Dehydratase family HF553_RS10745 PF01081 KDPG and KHG aldolase HF553_RS10750 PF02222 ATP-grasp domain HF553_RS10755 PF07130 YebG protein HF553_RS10760 PF13995 YebF-like protein HF553_RS10765 PF04391 Protein of unknown function (DUF533) HF553_RS10770 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HF553_RS10770 PF00326 Prolyl oligopeptidase family HF553_RS10775 PF00929 Exonuclease HF553_RS10780 PF00795 Carbon-nitrogen hydrolase HF553_RS10785 PF06440 DNA polymerase III, theta subunit HF553_RS10790 PF04234 CopC domain HF553_RS10795 PF05425 Copper resistance protein D HF553_RS10800 PF10709 Protein of unknown function (DUF2511) HF553_RS10805 PF00589 Phage integrase family HF553_RS10805 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain HF553_RS10860 PF00583 Acetyltransferase (GNAT) family HF553_RS10870 PF07166 Protein of unknown function (DUF1398) HF553_RS10875 PF05364 Salmonella type III secretion SopE effector N-terminus HF553_RS10875 PF07487 SopE GEF domain HF553_RS10885 PF00149 Calcineurin-like phosphoesterase HF553_RS10890 PF07358 Protein of unknown function (DUF1482) HF553_RS10895 PF07351 Protein of unknown function (DUF1480) HF553_RS10900 PF01189 16S rRNA methyltransferase RsmB/F HF553_RS10900 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HF553_RS10900 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HF553_RS10905 PF02470 MlaD protein HF553_RS10910 PF04403 Paraquat-inducible protein A HF553_RS10915 PF13185 GAF domain HF553_RS10920 PF17516 ProQ C-terminal domain HF553_RS10920 PF04352 ProQ/FINO family HF553_RS10925 PF00595 PDZ domain HF553_RS10925 PF11818 C-terminal domain of tail specific protease (DUF3340) HF553_RS10925 PF17804 Tail specific protease N-terminal domain HF553_RS10925 PF03572 Peptidase family S41 HF553_RS10930 PF01435 Peptidase family M48 HF553_RS10935 PF07690 Major Facilitator Superfamily HF553_RS10940 PF09339 IclR helix-turn-helix domain HF553_RS10940 PF01614 Bacterial transcriptional regulator HF553_RS10945 PF13996 YobH-like protein HF553_RS10950 PF13998 MgrB protein HF553_RS10955 PF13974 YebO-like protein HF553_RS10960 PF10736 Protein of unknown function (DUF2627) HF553_RS10965 PF00313 'Cold-shock' DNA-binding domain HF553_RS10970 PF03717 Penicillin-binding Protein dimerisation domain HF553_RS10970 PF00905 Penicillin binding protein transpeptidase domain HF553_RS10975 PF13847 Methyltransferase domain HF553_RS10980 PF02659 Putative manganese efflux pump HF553_RS10985 PF06173 Protein of unknown function (DUF986) HF553_RS10990 PF03613 PTS system mannose/fructose/sorbose family IID component HF553_RS10995 PF03609 PTS system sorbose-specific iic component HF553_RS11000 PF03830 PTS system sorbose subfamily IIB component HF553_RS11000 PF03610 PTS system fructose IIA component HF553_RS11005 PF03471 Transporter associated domain HF553_RS11005 PF03741 Integral membrane protein TerC family HF553_RS11010 PF00563 EAL domain HF553_RS11010 PF12792 CSS motif domain associated with EAL HF553_RS11015 PF03313 Serine dehydratase alpha chain HF553_RS11015 PF03315 Serine dehydratase beta chain HF553_RS11020 PF00293 NUDIX domain HF553_RS11025 PF04715 Anthranilate synthase component I, N terminal region HF553_RS11025 PF00425 chorismate binding enzyme HF553_RS11030 PF03701 Uncharacterised protein family (UPF0181) HF553_RS11035 PF01042 Endoribonuclease L-PSP HF553_RS11040 PF04851 Type III restriction enzyme, res subunit HF553_RS11040 PF13307 Helicase C-terminal domain HF553_RS11045 PF00814 Glycoprotease family HF553_RS11050 PF03843 Outer membrane lipoprotein Slp family HF553_RS11055 PF00501 AMP-binding enzyme HF553_RS11055 PF13193 AMP-binding enzyme C-terminal domain HF553_RS11060 PF01612 3'-5' exonuclease HF553_RS11060 PF00570 HRDC domain HF553_RS11065 PF03776 Septum formation topological specificity factor MinE HF553_RS11070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HF553_RS11075 PF05209 Septum formation inhibitor MinC, N-terminal domain HF553_RS11075 PF03775 Septum formation inhibitor MinC, C-terminal domain HF553_RS11080 PF05166 YcgL domain HF553_RS11085 PF01557 Fumarylacetoacetate (FAA) hydrolase family HF553_RS11090 PF03692 Putative zinc- or iron-chelating domain HF553_RS11100 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system HF553_RS11110 PF02600 Disulfide bond formation protein DsbB HF553_RS11115 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HF553_RS11120 PF07840 FadR C-terminal domain HF553_RS11120 PF00392 Bacterial regulatory proteins, gntR family HF553_RS11125 PF04293 SpoVR like protein HF553_RS11130 PF01266 FAD dependent oxidoreductase HF553_RS11135 PF01168 Alanine racemase, N-terminal domain HF553_RS11135 PF00842 Alanine racemase, C-terminal domain HF553_RS11140 PF02080 TrkA-C domain HF553_RS11140 PF03471 Transporter associated domain HF553_RS11140 PF00999 Sodium/hydrogen exchanger family HF553_RS11145 PF17676 LD-carboxypeptidase C-terminal domain HF553_RS11145 PF02016 LD-carboxypeptidase N-terminal domain HF553_RS11150 PF01464 Transglycosylase SLT domain HF553_RS11155 PF07317 Flagellar regulator YcgR HF553_RS11155 PF07238 PilZ domain HF553_RS11160 PF04226 Transglycosylase associated protein HF553_RS11165 PF01204 Trehalase HF553_RS11170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HF553_RS11170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HF553_RS11175 PF08173 Membrane bound YbgT-like protein HF553_RS11180 PF02322 Cytochrome bd terminal oxidase subunit II HF553_RS11185 PF01654 Cytochrome bd terminal oxidase subunit I HF553_RS11190 PF04809 HupH hydrogenase expression protein, C-terminal conserved region HF553_RS11195 PF07449 Hydrogenase-1 expression protein HyaE HF553_RS11200 PF01750 Hydrogenase maturation protease HF553_RS11205 PF01292 Prokaryotic cytochrome b561 HF553_RS11210 PF00374 Nickel-dependent hydrogenase HF553_RS11215 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HF553_RS11215 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HF553_RS11225 PF06071 Protein of unknown function (DUF933) HF553_RS11225 PF01926 50S ribosome-binding GTPase HF553_RS11230 PF01195 Peptidyl-tRNA hydrolase HF553_RS11235 PF10762 Protein of unknown function (DUF2583) HF553_RS11240 PF01740 STAS domain HF553_RS11240 PF00916 Sulfate permease family HF553_RS11245 PF14572 Phosphoribosyl synthetase-associated domain HF553_RS11245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HF553_RS11250 PF08544 GHMP kinases C terminal HF553_RS11250 PF00288 GHMP kinases N terminal domain HF553_RS11255 PF03550 Outer membrane lipoprotein LolB HF553_RS11260 PF01488 Shikimate / quinate 5-dehydrogenase HF553_RS11260 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HF553_RS11260 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HF553_RS11265 PF00472 RF-1 domain HF553_RS11265 PF03462 PCRF domain HF553_RS11270 PF13847 Methyltransferase domain HF553_RS11270 PF17827 PrmC N-terminal domain HF553_RS11275 PF04247 Invasion gene expression up-regulator, SirB HF553_RS11280 PF13369 Transglutaminase-like superfamily HF553_RS11285 PF00793 DAHP synthetase I family HF553_RS11290 PF01699 Sodium/calcium exchanger protein HF553_RS11295 PF06150 ChaB HF553_RS11300 PF02635 DsrE/DsrF-like family HF553_RS11305 PF11924 Inverse autotransporter, beta-domain HF553_RS11310 PF00072 Response regulator receiver domain HF553_RS11310 PF00196 Bacterial regulatory proteins, luxR family HF553_RS11315 PF00672 HAMP domain HF553_RS11315 PF07730 Histidine kinase HF553_RS11315 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HF553_RS11315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS11320 PF07690 Major Facilitator Superfamily HF553_RS11325 PF00384 Molybdopterin oxidoreductase HF553_RS11325 PF01568 Molydopterin dinucleotide binding domain HF553_RS11325 PF14710 Respiratory nitrate reductase alpha N-terminal HF553_RS11330 PF13247 4Fe-4S dicluster domain HF553_RS11330 PF14711 Respiratory nitrate reductase beta C-terminal HF553_RS11335 PF02613 Nitrate reductase delta subunit HF553_RS11340 PF02665 Nitrate reductase gamma subunit HF553_RS11370 PF01842 ACT domain HF553_RS11370 PF00551 Formyl transferase HF553_RS11375 PF02810 SEC-C motif HF553_RS11380 PF01734 Patatin-like phospholipase HF553_RS11385 PF00072 Response regulator receiver domain HF553_RS11390 PF00483 Nucleotidyl transferase HF553_RS11395 PF00816 H-NS histone family HF553_RS11400 PF00265 Thymidine kinase HF553_RS11405 PF00171 Aldehyde dehydrogenase family HF553_RS11405 PF00465 Iron-containing alcohol dehydrogenase HF553_RS11410 PF01914 MarC family integral membrane protein HF553_RS11415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF553_RS11420 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS11425 PF12911 N-terminal TM domain of oligopeptide transport permease C HF553_RS11425 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS11430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF553_RS11430 PF00005 ABC transporter HF553_RS11435 PF00005 ABC transporter HF553_RS11435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF553_RS11440 PF00027 Cyclic nucleotide-binding domain HF553_RS11440 PF00520 Ion transport protein HF553_RS11445 PF04269 Protein of unknown function, DUF440 HF553_RS11450 PF13091 PLD-like domain HF553_RS11450 PF13396 Phospholipase_D-nuclease N-terminal HF553_RS11460 PF03795 YCII-related domain HF553_RS11465 PF03544 Gram-negative bacterial TonB protein C-terminal HF553_RS11470 PF03061 Thioesterase superfamily HF553_RS11475 PF04279 Intracellular septation protein A HF553_RS11485 PF03692 Putative zinc- or iron-chelating domain HF553_RS11490 PF03922 OmpW family HF553_RS11495 PF05067 Manganese containing catalase HF553_RS11500 PF05974 Domain of unknown function (DUF892) HF553_RS11505 PF05974 Domain of unknown function (DUF892) HF553_RS11510 PF10685 Stress-induced bacterial acidophilic repeat motif HF553_RS11515 PF00290 Tryptophan synthase alpha chain HF553_RS11520 PF00291 Pyridoxal-phosphate dependent enzyme HF553_RS11525 PF00218 Indole-3-glycerol phosphate synthase HF553_RS11525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HF553_RS11530 PF00591 Glycosyl transferase family, a/b domain HF553_RS11530 PF02885 Glycosyl transferase family, helical bundle domain HF553_RS11530 PF00117 Glutamine amidotransferase class-I HF553_RS11535 PF04715 Anthranilate synthase component I, N terminal region HF553_RS11535 PF00425 chorismate binding enzyme HF553_RS11540 PF08255 Trp-operon Leader Peptide HF553_RS11545 PF02811 PHP domain HF553_RS11550 PF01300 Telomere recombination HF553_RS11555 PF00849 RNA pseudouridylate synthase HF553_RS11555 PF01479 S4 domain HF553_RS11560 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HF553_RS11565 PF00106 short chain dehydrogenase HF553_RS11570 PF08496 Peptidase family S49 N-terminal HF553_RS11570 PF01343 Peptidase family S49 HF553_RS11575 PF10692 Protein of unknown function (DUF2498) HF553_RS11580 PF01131 DNA topoisomerase HF553_RS11580 PF01751 Toprim domain HF553_RS11580 PF08272 Topoisomerase I zinc-ribbon-like HF553_RS11580 PF01396 Topoisomerase DNA binding C4 zinc finger HF553_RS11585 PF03466 LysR substrate binding domain HF553_RS11585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS11600 PF00330 Aconitase family (aconitate hydratase) HF553_RS11600 PF00694 Aconitase C-terminal domain HF553_RS11605 PF00925 GTP cyclohydrolase II HF553_RS11610 PF01569 PAP2 superfamily HF553_RS11615 PF06305 Lipopolysaccharide assembly protein A domain HF553_RS11620 PF18073 Rubredoxin metal binding domain HF553_RS11625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HF553_RS11630 PF01253 Translation initiation factor SUI1 HF553_RS11635 PF05433 Glycine zipper 2TM domain HF553_RS11640 PF08220 DeoR-like helix-turn-helix domain HF553_RS11640 PF00455 DeoR C terminal sensor domain HF553_RS11650 PF13426 PAS domain HF553_RS11650 PF00990 Diguanylate cyclase, GGDEF domain HF553_RS11650 PF00563 EAL domain HF553_RS11655 PF08206 Ribonuclease B OB domain HF553_RS11655 PF17876 Cold shock domain HF553_RS11655 PF00575 S1 RNA binding domain HF553_RS11655 PF00773 RNB domain HF553_RS11690 PF00005 ABC transporter HF553_RS11695 PF00005 ABC transporter HF553_RS11695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF553_RS11700 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS11700 PF12911 N-terminal TM domain of oligopeptide transport permease C HF553_RS11745 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS11750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF553_RS11755 PF00158 Sigma-54 interaction domain HF553_RS11755 PF02954 Bacterial regulatory protein, Fis family HF553_RS11760 PF04012 PspA/IM30 family HF553_RS11765 PF06667 Phage shock protein B HF553_RS11770 PF04024 PspC domain HF553_RS11775 PF09584 Phage shock protein PspD (Phageshock_PspD) HF553_RS11780 PF00581 Rhodanese-like domain HF553_RS11785 PF04317 YcjX-like family, DUF463 HF553_RS11790 PF05128 Domain of unknown function (DUF697) HF553_RS11795 PF00158 Sigma-54 interaction domain HF553_RS11795 PF18024 Helix-turn-helix domain HF553_RS11800 PF08534 Redoxin HF553_RS11805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HF553_RS11805 PF13378 Enolase C-terminal domain-like HF553_RS11810 PF00246 Zinc carboxypeptidase HF553_RS11815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF553_RS11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS11825 PF03466 LysR substrate binding domain HF553_RS11830 PF00248 Aldo/keto reductase family HF553_RS11840 PF00440 Bacterial regulatory proteins, tetR family HF553_RS11855 PF06445 GyrI-like small molecule binding domain HF553_RS11855 PF12833 Helix-turn-helix domain HF553_RS11875 PF08534 Redoxin HF553_RS11895 PF00924 Mechanosensitive ion channel HF553_RS11900 PF10749 Protein of unknown function (DUF2534) HF553_RS11905 PF00582 Universal stress protein family HF553_RS11910 PF13545 Crp-like helix-turn-helix domain HF553_RS11910 PF00027 Cyclic nucleotide-binding domain HF553_RS11915 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HF553_RS11915 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HF553_RS11920 PF01713 Smr domain HF553_RS11925 PF00672 HAMP domain HF553_RS11925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF553_RS11925 PF02203 Tar ligand binding domain homologue HF553_RS11930 PF01544 CorA-like Mg2+ transporter protein HF553_RS11935 PF00271 Helicase conserved C-terminal domain HF553_RS11935 PF03880 DbpA RNA binding domain HF553_RS11935 PF00270 DEAD/DEAH box helicase HF553_RS11940 PF01171 PP-loop family HF553_RS11955 PF00893 Small Multidrug Resistance protein HF553_RS11960 PF00582 Universal stress protein family HF553_RS11965 PF01797 Transposase IS200 like HF553_RS11970 PF10371 Domain of unknown function HF553_RS11970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF553_RS11970 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HF553_RS11970 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HF553_RS11970 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HF553_RS11980 PF03891 Domain of unknown function (DUF333) HF553_RS11985 PF03724 META domain HF553_RS11990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF553_RS11990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF553_RS11995 PF11739 Dicarboxylate transport HF553_RS12000 PF13617 YnbE-like lipoprotein HF553_RS12005 PF07027 Protein of unknown function (DUF1318) HF553_RS12015 PF02525 Flavodoxin-like fold HF553_RS12020 PF00270 DEAD/DEAH box helicase HF553_RS12020 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HF553_RS12020 PF04408 Helicase associated domain (HA2) HF553_RS12020 PF00271 Helicase conserved C-terminal domain HF553_RS12020 PF11898 Domain of unknown function (DUF3418) HF553_RS12025 PF02698 DUF218 domain HF553_RS12030 PF01292 Prokaryotic cytochrome b561 HF553_RS12035 PF08242 Methyltransferase domain HF553_RS12045 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS12050 PF00005 ABC transporter HF553_RS12055 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS12060 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF553_RS12070 PF06767 Sif protein HF553_RS12070 PF00657 GDSL-like Lipase/Acylhydrolase HF553_RS12085 PF02583 Metal-sensitive transcriptional repressor HF553_RS12090 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS12090 PF00107 Zinc-binding dehydrogenase HF553_RS12095 PF02203 Tar ligand binding domain homologue HF553_RS12095 PF00672 HAMP domain HF553_RS12095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF553_RS12100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS12100 PF03466 LysR substrate binding domain HF553_RS12105 PF07063 Domain of unknown function (DUF1338) HF553_RS12110 PF00135 Carboxylesterase family HF553_RS12115 PF04349 Periplasmic glucan biosynthesis protein, MdoG HF553_RS12125 PF03611 PTS system sugar-specific permease component HF553_RS12130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HF553_RS12135 PF05343 M42 glutamyl aminopeptidase HF553_RS12140 PF13302 Acetyltransferase (GNAT) domain HF553_RS12145 PF18836 Beta solenoid repeat from YDCK HF553_RS12150 PF03595 Voltage-dependent anion channel HF553_RS12155 PF03848 Tellurite resistance protein TehB HF553_RS12160 PF11769 Protein of unknown function (DUF3313) HF553_RS12165 PF03594 Benzoate membrane transport protein HF553_RS12170 PF01381 Helix-turn-helix HF553_RS12170 PF07883 Cupin domain HF553_RS12175 PF01136 Peptidase family U32 HF553_RS12175 PF12392 Collagenase HF553_RS12180 PF10829 Protein of unknown function (DUF2554) HF553_RS12185 PF06767 Sif protein HF553_RS12200 PF01427 D-ala-D-ala dipeptidase HF553_RS12205 PF00155 Aminotransferase class I and II HF553_RS12205 PF00392 Bacterial regulatory proteins, gntR family HF553_RS12210 PF00171 Aldehyde dehydrogenase family HF553_RS12220 PF10753 Toxin GhoT_OrtT HF553_RS12240 PF10735 Protein of unknown function (DUF2526) HF553_RS12245 PF04657 Putative inner membrane exporter, YdcZ HF553_RS12255 PF00107 Zinc-binding dehydrogenase HF553_RS12255 PF16884 N-terminal domain of oxidoreductase HF553_RS12260 PF00392 Bacterial regulatory proteins, gntR family HF553_RS12260 PF07729 FCD domain HF553_RS12265 PF07715 TonB-dependent Receptor Plug Domain HF553_RS12265 PF00593 TonB dependent receptor HF553_RS12275 PF06004 Bacterial protein of unknown function (DUF903) HF553_RS12280 PF00324 Amino acid permease HF553_RS12290 PF00797 N-acetyltransferase HF553_RS12295 PF02567 Phenazine biosynthesis-like protein HF553_RS12300 PF02665 Nitrate reductase gamma subunit HF553_RS12305 PF02613 Nitrate reductase delta subunit HF553_RS12310 PF13247 4Fe-4S dicluster domain HF553_RS12310 PF14711 Respiratory nitrate reductase beta C-terminal HF553_RS12315 PF14710 Respiratory nitrate reductase alpha N-terminal HF553_RS12315 PF00384 Molybdopterin oxidoreductase HF553_RS12315 PF01568 Molydopterin dinucleotide binding domain HF553_RS12320 PF07690 Major Facilitator Superfamily HF553_RS12330 PF07690 Major Facilitator Superfamily HF553_RS12340 PF00267 Gram-negative porin HF553_RS12345 PF00892 EamA-like transporter family HF553_RS12355 PF13247 4Fe-4S dicluster domain HF553_RS12355 PF12800 4Fe-4S binding domain HF553_RS12355 PF09163 Formate dehydrogenase N, transmembrane HF553_RS12360 PF01292 Prokaryotic cytochrome b561 HF553_RS12365 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS12365 PF00107 Zinc-binding dehydrogenase HF553_RS12370 PF03949 Malic enzyme, NAD binding domain HF553_RS12370 PF00390 Malic enzyme, N-terminal domain HF553_RS12375 PF08136 30S ribosomal protein subunit S22 family HF553_RS12380 PF10684 Putative biofilm-dependent modulation protein HF553_RS12385 PF02566 OsmC-like protein HF553_RS12390 PF06109 Haemolysin E (HlyE) HF553_RS12400 PF06411 HdeA/HdeB family HF553_RS12410 PF00128 Alpha amylase, catalytic domain HF553_RS12410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HF553_RS12410 PF11941 Domain of unknown function (DUF3459) HF553_RS12415 PF00128 Alpha amylase, catalytic domain HF553_RS12420 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HF553_RS12420 PF00128 Alpha amylase, catalytic domain HF553_RS12425 PF00155 Aminotransferase class I and II HF553_RS12430 PF03553 Na+/H+ antiporter family HF553_RS12435 PF00356 Bacterial regulatory proteins, lacI family HF553_RS12470 PF01042 Endoribonuclease L-PSP HF553_RS12475 PF02547 Queuosine biosynthesis protein HF553_RS12485 PF01494 FAD binding domain HF553_RS12490 PF07690 Major Facilitator Superfamily HF553_RS12500 PF07690 Major Facilitator Superfamily HF553_RS12505 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS12505 PF00107 Zinc-binding dehydrogenase HF553_RS12510 PF00392 Bacterial regulatory proteins, gntR family HF553_RS12510 PF07729 FCD domain HF553_RS12520 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HF553_RS12520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HF553_RS12525 PF00374 Nickel-dependent hydrogenase HF553_RS12530 PF01292 Prokaryotic cytochrome b561 HF553_RS12535 PF01750 Hydrogenase maturation protease HF553_RS12540 PF01455 HupF/HypC family HF553_RS12550 PF04809 HupH hydrogenase expression protein, C-terminal conserved region HF553_RS12560 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HF553_RS12565 PF00267 Gram-negative porin HF553_RS12575 PF01062 Bestrophin, RFP-TM, chloride channel HF553_RS12580 PF13811 Domain of unknown function (DUF4186) HF553_RS12585 PF04960 Glutaminase HF553_RS12590 PF00171 Aldehyde dehydrogenase family HF553_RS12595 PF03466 LysR substrate binding domain HF553_RS12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS12600 PF07690 Major Facilitator Superfamily HF553_RS12605 PF01914 MarC family integral membrane protein HF553_RS12610 PF01047 MarR family HF553_RS12615 PF12833 Helix-turn-helix domain HF553_RS12620 PF13999 MarB protein HF553_RS12625 PF00892 EamA-like transporter family HF553_RS12630 PF07690 Major Facilitator Superfamily HF553_RS12640 PF04076 Bacterial OB fold (BOF) protein HF553_RS12645 PF02464 Competence-damaged protein HF553_RS12650 PF10685 Stress-induced bacterial acidophilic repeat motif HF553_RS12655 PF01432 Peptidase family M3 HF553_RS12660 PF00106 short chain dehydrogenase HF553_RS12665 PF00392 Bacterial regulatory proteins, gntR family HF553_RS12665 PF07729 FCD domain HF553_RS12670 PF14001 YdfZ protein HF553_RS12675 PF01232 Mannitol dehydrogenase Rossmann domain HF553_RS12675 PF08125 Mannitol dehydrogenase C-terminal domain HF553_RS12680 PF07690 Major Facilitator Superfamily HF553_RS12680 PF00083 Sugar (and other) transporter HF553_RS12685 PF00107 Zinc-binding dehydrogenase HF553_RS12685 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS12690 PF13378 Enolase C-terminal domain-like HF553_RS12690 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HF553_RS12695 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HF553_RS12700 PF06932 Protein of unknown function (DUF1283) HF553_RS12705 PF13302 Acetyltransferase (GNAT) domain HF553_RS12710 PF06788 Uncharacterised protein family (UPF0257) HF553_RS12715 PF06649 Protein of unknown function (DUF1161) HF553_RS12720 PF00384 Molybdopterin oxidoreductase HF553_RS12720 PF01568 Molydopterin dinucleotide binding domain HF553_RS12720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF553_RS12725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF553_RS12725 PF00384 Molybdopterin oxidoreductase HF553_RS12725 PF01568 Molydopterin dinucleotide binding domain HF553_RS12730 PF13247 4Fe-4S dicluster domain HF553_RS12730 PF12800 4Fe-4S binding domain HF553_RS12735 PF04976 DMSO reductase anchor subunit (DmsC) HF553_RS12740 PF02613 Nitrate reductase delta subunit HF553_RS12745 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS12750 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HF553_RS12755 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS12760 PF00005 ABC transporter HF553_RS12760 PF00571 CBS domain HF553_RS12765 PF00654 Voltage gated chloride channel HF553_RS12775 PF00480 ROK family HF553_RS12780 PF03466 LysR substrate binding domain HF553_RS12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS12785 PF07690 Major Facilitator Superfamily HF553_RS12795 PF00089 Trypsin HF553_RS12800 PF00893 Small Multidrug Resistance protein HF553_RS12805 PF00893 Small Multidrug Resistance protein HF553_RS12815 PF01594 AI-2E family transporter HF553_RS12820 PF02233 NAD(P) transhydrogenase beta subunit HF553_RS12825 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HF553_RS12825 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HF553_RS12825 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HF553_RS12830 PF07338 Protein of unknown function (DUF1471) HF553_RS12835 PF13520 Amino acid permease HF553_RS12840 PF06942 GlpM protein HF553_RS12845 PF00072 Response regulator receiver domain HF553_RS12845 PF00486 Transcriptional regulatory protein, C terminal HF553_RS12850 PF00267 Gram-negative porin HF553_RS12855 PF13382 Adenine deaminase C-terminal domain HF553_RS12855 PF01979 Amidohydrolase family HF553_RS12860 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS12860 PF00672 HAMP domain HF553_RS12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS12865 PF05472 DNA replication terminus site-binding protein (Ter protein) HF553_RS12870 PF10415 Fumarase C C-terminus HF553_RS12870 PF00206 Lyase HF553_RS12875 PF05683 Fumarase C-terminus HF553_RS12875 PF05681 Fumarate hydratase (Fumerase) HF553_RS12880 PF01238 Phosphomannose isomerase type I HF553_RS12885 PF06097 Bacterial protein of unknown function (DUF945) HF553_RS12900 PF00962 Adenosine/AMP deaminase HF553_RS12905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HF553_RS12905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HF553_RS12915 PF05321 Haemolysin expression modulating protein HF553_RS12920 PF10754 Protein of unknown function (DUF2569) HF553_RS12925 PF02508 Rnf-Nqr subunit, membrane protein HF553_RS12930 PF04060 Putative Fe-S cluster HF553_RS12935 PF10531 SLBB domain HF553_RS12935 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HF553_RS12935 PF13375 RnfC Barrel sandwich hybrid domain HF553_RS12935 PF12838 4Fe-4S dicluster domain HF553_RS12940 PF03116 NQR2, RnfD, RnfE family HF553_RS12945 PF04205 FMN-binding domain HF553_RS12950 PF02508 Rnf-Nqr subunit, membrane protein HF553_RS12955 PF10576 Iron-sulfur binding domain of endonuclease III HF553_RS12955 PF00633 Helix-hairpin-helix motif HF553_RS12955 PF00730 HhH-GPD superfamily base excision DNA repair protein HF553_RS12960 PF00854 POT family HF553_RS12965 PF02798 Glutathione S-transferase, N-terminal domain HF553_RS12965 PF00043 Glutathione S-transferase, C-terminal domain HF553_RS12970 PF08543 Phosphomethylpyrimidine kinase HF553_RS12975 PF01479 S4 domain HF553_RS12975 PF00579 tRNA synthetases class I (W and Y) HF553_RS12980 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HF553_RS12980 PF01243 Pyridoxamine 5'-phosphate oxidase HF553_RS12985 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme HF553_RS12990 PF03702 Anhydro-N-acetylmuramic acid kinase HF553_RS12995 PF05433 Glycine zipper 2TM domain HF553_RS13000 PF01047 MarR family HF553_RS13005 PF07869 Protein of unknown function (DUF1656) HF553_RS13010 PF00529 HlyD membrane-fusion protein of T1SS HF553_RS13010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF553_RS13015 PF04632 Fusaric acid resistance protein family HF553_RS13020 PF00080 Copper/zinc superoxide dismutase (SODC) HF553_RS13025 PF00248 Aldo/keto reductase family HF553_RS13030 PF06945 Protein of unknown function (DUF1289) HF553_RS13035 PF00440 Bacterial regulatory proteins, tetR family HF553_RS13035 PF16925 Tetracyclin repressor-like, C-terminal domain HF553_RS13040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HF553_RS13045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HF553_RS13050 PF00929 Exonuclease HF553_RS13055 PF00462 Glutaredoxin HF553_RS13060 PF00877 NlpC/P60 family HF553_RS13065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HF553_RS13065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HF553_RS13075 PF00356 Bacterial regulatory proteins, lacI family HF553_RS13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS13080 PF03466 LysR substrate binding domain HF553_RS13085 PF07690 Major Facilitator Superfamily HF553_RS13095 PF00677 Lumazine binding domain HF553_RS13100 PF01554 MatE HF553_RS13115 PF01312 FlhB HrpN YscU SpaS Family HF553_RS13120 PF01311 Bacterial export proteins, family 1 HF553_RS13125 PF01313 Bacterial export proteins, family 3 HF553_RS13130 PF00813 FliP family HF553_RS13135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HF553_RS13150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HF553_RS13150 PF18269 T3SS EscN ATPase C-terminal domain HF553_RS13155 PF00771 FHIPEP family HF553_RS13165 PF07201 HrpJ-like domain HF553_RS13180 PF01514 Secretory protein of YscJ/FliF family HF553_RS13220 PF05802 Enterobacterial EspB protein HF553_RS13225 PF04888 Secretion system effector C (SseC) like family HF553_RS13235 PF03433 EspA-like secreted protein HF553_RS13255 PF03958 Bacterial type II/III secretion system short domain HF553_RS13255 PF00263 Bacterial type II and III secretion system protein HF553_RS13265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS13265 PF00672 HAMP domain HF553_RS13265 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS13265 PF00072 Response regulator receiver domain HF553_RS13265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HF553_RS13265 PF01627 Hpt domain HF553_RS13270 PF00072 Response regulator receiver domain HF553_RS13270 PF00196 Bacterial regulatory proteins, luxR family HF553_RS13275 PF13411 MerR HTH family regulatory protein HF553_RS13280 PF08349 Protein of unknown function (DUF1722) HF553_RS13285 PF10965 Protein of unknown function (DUF2767) HF553_RS13290 PF00196 Bacterial regulatory proteins, luxR family HF553_RS13290 PF00072 Response regulator receiver domain HF553_RS13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS13295 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS13300 PF13247 4Fe-4S dicluster domain HF553_RS13305 PF03916 Polysulphide reductase, NrfD HF553_RS13310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF553_RS13310 PF00384 Molybdopterin oxidoreductase HF553_RS13310 PF01568 Molydopterin dinucleotide binding domain HF553_RS13315 PF00294 pfkB family carbohydrate kinase HF553_RS13325 PF00561 alpha/beta hydrolase fold HF553_RS13330 PF00324 Amino acid permease HF553_RS13335 PF00224 Pyruvate kinase, barrel domain HF553_RS13335 PF02887 Pyruvate kinase, alpha/beta domain HF553_RS13340 PF04728 Lipoprotein leucine-zipper HF553_RS13345 PF04728 Lipoprotein leucine-zipper HF553_RS13350 PF04728 Lipoprotein leucine-zipper HF553_RS13355 PF17969 L,D-transpeptidase C-terminal domain HF553_RS13355 PF01476 LysM domain HF553_RS13355 PF03734 L,D-transpeptidase catalytic domain HF553_RS13360 PF02657 Fe-S metabolism associated domain HF553_RS13365 PF00266 Aminotransferase class-V HF553_RS13370 PF01458 Uncharacterized protein family (UPF0051) HF553_RS13375 PF00005 ABC transporter HF553_RS13380 PF01458 Uncharacterized protein family (UPF0051) HF553_RS13385 PF01521 Iron-sulphur cluster biosynthesis HF553_RS13395 PF15930 Domain of unknown function HF553_RS13400 PF03061 Thioesterase superfamily HF553_RS13405 PF13183 4Fe-4S dicluster domain HF553_RS13405 PF01565 FAD binding domain HF553_RS13405 PF02913 FAD linked oxidases, C-terminal domain HF553_RS13420 PF08965 Domain of unknown function (DUF1870) HF553_RS13425 PF07690 Major Facilitator Superfamily HF553_RS13430 PF07690 Major Facilitator Superfamily HF553_RS13435 PF08501 Shikimate dehydrogenase substrate binding domain HF553_RS13435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HF553_RS13440 PF01487 Type I 3-dehydroquinase HF553_RS13445 PF01144 Coenzyme A transferase HF553_RS13450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF553_RS13450 PF02770 Acyl-CoA dehydrogenase, middle domain HF553_RS13450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF553_RS13455 PF12833 Helix-turn-helix domain HF553_RS13455 PF02311 AraC-like ligand binding domain HF553_RS13460 PF01012 Electron transfer flavoprotein domain HF553_RS13465 PF01012 Electron transfer flavoprotein domain HF553_RS13465 PF00766 Electron transfer flavoprotein FAD-binding domain HF553_RS13470 PF01494 FAD binding domain HF553_RS13480 PF13193 AMP-binding enzyme C-terminal domain HF553_RS13480 PF00501 AMP-binding enzyme HF553_RS13485 PF00391 PEP-utilising enzyme, mobile domain HF553_RS13485 PF02896 PEP-utilising enzyme, TIM barrel domain HF553_RS13485 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HF553_RS13490 PF03618 Kinase/pyrophosphorylase HF553_RS13495 PF00793 DAHP synthetase I family HF553_RS13500 PF10636 Hemin uptake protein hemP HF553_RS13505 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HF553_RS13510 PF00563 EAL domain HF553_RS13520 PF00877 NlpC/P60 family HF553_RS13525 PF00005 ABC transporter HF553_RS13530 PF00255 Glutathione peroxidase HF553_RS13535 PF01032 FecCD transport family HF553_RS13540 PF00216 Bacterial DNA-binding protein HF553_RS13545 PF03483 B3/4 domain HF553_RS13545 PF01588 Putative tRNA binding domain HF553_RS13545 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HF553_RS13545 PF03147 Ferredoxin-fold anticodon binding domain HF553_RS13545 PF03484 tRNA synthetase B5 domain HF553_RS13550 PF01409 tRNA synthetases class II core domain (F) HF553_RS13550 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HF553_RS13560 PF00453 Ribosomal protein L20 HF553_RS13565 PF01632 Ribosomal protein L35 HF553_RS13570 PF05198 Translation initiation factor IF-3, N-terminal domain HF553_RS13570 PF00707 Translation initiation factor IF-3, C-terminal domain HF553_RS13575 PF02824 TGS domain HF553_RS13575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HF553_RS13575 PF03129 Anticodon binding domain HF553_RS13575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HF553_RS13590 PF01223 DNA/RNA non-specific endonuclease HF553_RS13605 PF04338 Protein of unknown function, DUF481 HF553_RS13610 PF00294 pfkB family carbohydrate kinase HF553_RS13615 PF11080 Endoribonuclease GhoS HF553_RS13620 PF03881 Fructosamine kinase HF553_RS13625 PF14002 YniB-like protein HF553_RS13630 PF13419 Haloacid dehalogenase-like hydrolase HF553_RS13635 PF04307 LexA-binding, inner membrane-associated putative hydrolase HF553_RS13645 PF10729 Cell division activator CedA HF553_RS13650 PF06628 Catalase-related immune-responsive HF553_RS13650 PF18011 C-terminal domain found in long catalases HF553_RS13650 PF00199 Catalase HF553_RS13655 PF04794 YdjC-like protein HF553_RS13660 PF11975 Family 4 glycosyl hydrolase C-terminal domain HF553_RS13660 PF02056 Family 4 glycosyl hydrolase HF553_RS13665 PF07883 Cupin domain HF553_RS13665 PF12833 Helix-turn-helix domain HF553_RS13670 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HF553_RS13675 PF02378 Phosphotransferase system, EIIC HF553_RS13680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HF553_RS13685 PF04355 SmpA / OmlA family HF553_RS13690 PF02540 NAD synthase HF553_RS13700 PF07813 LTXXQ motif family protein HF553_RS13705 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HF553_RS13710 PF04996 Succinylarginine dihydrolase HF553_RS13715 PF00171 Aldehyde dehydrogenase family HF553_RS13720 PF04958 Arginine N-succinyltransferase beta subunit HF553_RS13725 PF00202 Aminotransferase class-III HF553_RS13730 PF03372 Endonuclease/Exonuclease/phosphatase family HF553_RS13735 PF00293 NUDIX domain HF553_RS13740 PF07383 Protein of unknown function (DUF1496) HF553_RS13745 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HF553_RS13745 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HF553_RS13750 PF01131 DNA topoisomerase HF553_RS13750 PF01751 Toprim domain HF553_RS13755 PF02769 AIR synthase related protein, C-terminal domain HF553_RS13755 PF00586 AIR synthase related protein, N-terminal domain HF553_RS13760 PF00881 Nitroreductase family HF553_RS13765 PF01343 Peptidase family S49 HF553_RS13770 PF00710 Asparaginase, N-terminal HF553_RS13770 PF17763 Glutaminase/Asparaginase C-terminal domain HF553_RS13775 PF00857 Isochorismatase family HF553_RS13780 PF07023 Protein of unknown function (DUF1315) HF553_RS13785 PF01641 SelR domain HF553_RS13790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HF553_RS13790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HF553_RS13795 PF01263 Aldose 1-epimerase HF553_RS13800 PF00248 Aldo/keto reductase family HF553_RS13805 PF13186 Iron-sulfur cluster-binding domain HF553_RS13805 PF04055 Radical SAM superfamily HF553_RS13810 PF06629 MltA-interacting protein MipA HF553_RS13815 PF08298 PrkA AAA domain HF553_RS13815 PF06798 PrkA serine protein kinase C-terminal domain HF553_RS13820 PF04285 Protein of unknown function (DUF444) HF553_RS13830 PF00990 Diguanylate cyclase, GGDEF domain HF553_RS13830 PF17155 Gammaproteobacterial periplasmic sensor domain HF553_RS13835 PF04073 Aminoacyl-tRNA editing domain HF553_RS13845 PF04284 Protein of unknown function (DUF441) HF553_RS13850 PF12833 Helix-turn-helix domain HF553_RS13850 PF02311 AraC-like ligand binding domain HF553_RS13855 PF07690 Major Facilitator Superfamily HF553_RS13860 PF04343 Protein of unknown function, DUF488 HF553_RS13870 PF03891 Domain of unknown function (DUF333) HF553_RS13880 PF04226 Transglycosylase associated protein HF553_RS13890 PF08956 Domain of unknown function (DUF1869) HF553_RS13895 PF09313 Domain of unknown function (DUF1971) HF553_RS13900 PF01810 LysE type translocator HF553_RS13905 PF01817 Chorismate mutase type II HF553_RS13920 PF00376 MerR family regulatory protein HF553_RS13920 PF09278 MerR, DNA binding HF553_RS13930 PF13427 Domain of unknown function (DUF4111) HF553_RS13930 PF01909 Nucleotidyltransferase domain HF553_RS13935 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HF553_RS13950 PF00924 Mechanosensitive ion channel HF553_RS13955 PF00005 ABC transporter HF553_RS13960 PF00005 ABC transporter HF553_RS13965 PF12911 N-terminal TM domain of oligopeptide transport permease C HF553_RS13965 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS13970 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS13975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF553_RS13985 PF01292 Prokaryotic cytochrome b561 HF553_RS13995 PF00011 Hsp20/alpha crystallin family HF553_RS14020 PF06316 Enterobacterial Ail/Lom protein HF553_RS14030 PF00313 'Cold-shock' DNA-binding domain HF553_RS14035 PF00652 Ricin-type beta-trefoil lectin domain HF553_RS14040 PF06183 DinI-like family HF553_RS14045 PF03372 Endonuclease/Exonuclease/phosphatase family HF553_RS14075 PF01797 Transposase IS200 like HF553_RS14080 PF00180 Isocitrate/isopropylmalate dehydrogenase HF553_RS14095 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) HF553_RS14100 PF04865 Baseplate J-like protein HF553_RS14145 PF04984 Phage tail sheath protein subtilisin-like domain HF553_RS14145 PF17482 Phage tail sheath C-terminal domain HF553_RS14190 PF04860 Phage portal protein HF553_RS14200 PF03354 Phage Terminase HF553_RS14240 PF03589 Antitermination protein HF553_RS14245 PF06147 Protein of unknown function (DUF968) HF553_RS14255 PF05866 Endodeoxyribonuclease RusA HF553_RS14260 PF02086 D12 class N6 adenine-specific DNA methyltransferase HF553_RS14280 PF10549 ORF11CD3 domain HF553_RS14280 PF09669 Phage regulatory protein Rha (Phage_pRha) HF553_RS14300 PF10431 C-terminal, D2-small domain, of ClpB protein HF553_RS14300 PF07724 AAA domain (Cdc48 subfamily) HF553_RS14300 PF06689 ClpX C4-type zinc finger HF553_RS14315 PF10065 Uncharacterized conserved protein (DUF2303) HF553_RS14350 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain HF553_RS14350 PF00589 Phage integrase family HF553_RS14355 PF00180 Isocitrate/isopropylmalate dehydrogenase HF553_RS14360 PF00849 RNA pseudouridylate synthase HF553_RS14370 PF00293 NUDIX domain HF553_RS14380 PF04356 Protein of unknown function (DUF489) HF553_RS14385 PF08328 Adenylosuccinate lyase C-terminal HF553_RS14385 PF00206 Lyase HF553_RS14390 PF00072 Response regulator receiver domain HF553_RS14390 PF00486 Transcriptional regulatory protein, C terminal HF553_RS14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS14395 PF08918 PhoQ Sensor HF553_RS14400 PF08007 Cupin superfamily protein HF553_RS14410 PF01546 Peptidase family M20/M25/M40 HF553_RS14410 PF07687 Peptidase dimerisation domain HF553_RS14415 PF00005 ABC transporter HF553_RS14415 PF08402 TOBE domain HF553_RS14420 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS14425 PF06767 Sif protein HF553_RS14430 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS14435 PF13416 Bacterial extracellular solute-binding protein HF553_RS14440 PF02146 Sir2 family HF553_RS14445 PF00480 ROK family HF553_RS14450 PF02687 FtsX-like permease family HF553_RS14450 PF12704 MacB-like periplasmic core domain HF553_RS14455 PF00005 ABC transporter HF553_RS14460 PF02687 FtsX-like permease family HF553_RS14460 PF12704 MacB-like periplasmic core domain HF553_RS14465 PF00271 Helicase conserved C-terminal domain HF553_RS14465 PF02559 CarD-like/TRCF domain HF553_RS14465 PF17757 UvrB interaction domain HF553_RS14465 PF03461 TRCF domain HF553_RS14465 PF00270 DEAD/DEAH box helicase HF553_RS14470 PF03734 L,D-transpeptidase catalytic domain HF553_RS14470 PF01476 LysM domain HF553_RS14470 PF17969 L,D-transpeptidase C-terminal domain HF553_RS14475 PF07338 Protein of unknown function (DUF1471) HF553_RS14480 PF00440 Bacterial regulatory proteins, tetR family HF553_RS14485 PF05433 Glycine zipper 2TM domain HF553_RS14490 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS14495 PF05728 Uncharacterised protein family (UPF0227) HF553_RS14500 PF00933 Glycosyl hydrolase family 3 N terminal domain HF553_RS14505 PF01636 Phosphotransferase enzyme family HF553_RS14510 PF13036 Peptidoglycan-synthase activator LpoB HF553_RS14515 PF07233 Protein of unknown function (DUF1425) HF553_RS14520 PF01230 HIT domain HF553_RS14525 PF00593 TonB dependent receptor HF553_RS14525 PF07715 TonB-dependent Receptor Plug Domain HF553_RS14530 PF02378 Phosphotransferase system, EIIC HF553_RS14530 PF00367 phosphotransferase system, EIIB HF553_RS14535 PF01026 TatD related DNase HF553_RS14540 PF09115 DNA polymerase III, delta subunit, C terminal HF553_RS14545 PF02223 Thymidylate kinase HF553_RS14550 PF02618 YceG-like family HF553_RS14555 PF01063 Amino-transferase class IV HF553_RS14560 PF02801 Beta-ketoacyl synthase, C-terminal domain HF553_RS14560 PF00109 Beta-ketoacyl synthase, N-terminal domain HF553_RS14565 PF00550 Phosphopantetheine attachment site HF553_RS14575 PF00698 Acyl transferase domain HF553_RS14580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HF553_RS14580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HF553_RS14585 PF02504 Fatty acid synthesis protein HF553_RS14590 PF01783 Ribosomal L32p protein family HF553_RS14595 PF02620 Large ribosomal RNA subunit accumulation protein YceD HF553_RS14600 PF02545 Maf-like protein HF553_RS14605 PF00849 RNA pseudouridylate synthase HF553_RS14605 PF01479 S4 domain HF553_RS14610 PF00575 S1 RNA binding domain HF553_RS14610 PF10150 Ribonuclease E/G family HF553_RS14610 PF12111 Polyribonucleotide phosphorylase C terminal HF553_RS14615 PF00669 Bacterial flagellin N-terminal helical region HF553_RS14620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HF553_RS14620 PF00460 Flagella basal body rod protein HF553_RS14625 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HF553_RS14625 PF10135 Rod binding protein HF553_RS14630 PF02119 Flagellar P-ring protein HF553_RS14635 PF02107 Flagellar L-ring protein HF553_RS14640 PF00460 Flagella basal body rod protein HF553_RS14640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HF553_RS14645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HF553_RS14645 PF00460 Flagella basal body rod protein HF553_RS14650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HF553_RS14650 PF07559 Flagellar basal body protein FlaE HF553_RS14650 PF00460 Flagella basal body rod protein HF553_RS14655 PF03963 Flagellar hook capping protein - N-terminal region HF553_RS14655 PF13861 FlgD Tudor-like domain HF553_RS14655 PF13860 FlgD Ig-like domain HF553_RS14660 PF00460 Flagella basal body rod protein HF553_RS14660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HF553_RS14665 PF00460 Flagella basal body rod protein HF553_RS14670 PF13144 Chaperone for flagella basal body P-ring formation HF553_RS14675 PF04316 Anti-sigma-28 factor, FlgM HF553_RS14680 PF05130 FlgN protein HF553_RS14685 PF03023 Lipid II flippase MurJ HF553_RS14695 PF04337 Protein of unknown function, DUF480 HF553_RS14700 PF13302 Acetyltransferase (GNAT) domain HF553_RS14705 PF07690 Major Facilitator Superfamily HF553_RS14710 PF13417 Glutathione S-transferase, N-terminal domain HF553_RS14710 PF04399 Glutaredoxin 2, C terminal domain HF553_RS14715 PF07273 Protein of unknown function (DUF1439) HF553_RS14720 PF01979 Amidohydrolase family HF553_RS14725 PF06183 DinI-like family HF553_RS14730 PF13991 BssS protein family HF553_RS14735 PF01266 FAD dependent oxidoreductase HF553_RS14740 PF10968 Protein of unknown function (DUF2770) HF553_RS14745 PF01292 Prokaryotic cytochrome b561 HF553_RS14750 PF04264 YceI-like domain HF553_RS14760 PF03279 Bacterial lipid A biosynthesis acyltransferase HF553_RS14765 PF07690 Major Facilitator Superfamily HF553_RS14770 PF13984 MsyB protein HF553_RS14775 PF07119 Protein of unknown function (DUF1375) HF553_RS14780 PF00535 Glycosyl transferase family 2 HF553_RS14785 PF04349 Periplasmic glucan biosynthesis protein, MdoG HF553_RS14790 PF01757 Acyltransferase family HF553_RS14795 PF13091 PLD-like domain HF553_RS14800 PF01661 Macro domain HF553_RS14810 PF10610 Thin aggregative fimbriae synthesis protein HF553_RS14815 PF07012 Curlin associated repeat HF553_RS14820 PF07012 Curlin associated repeat HF553_RS14825 PF00196 Bacterial regulatory proteins, luxR family HF553_RS14830 PF10627 Curli assembly protein CsgE HF553_RS14835 PF10614 Type VIII secretion system (T8SS), CsgF protein HF553_RS14840 PF03783 Curli production assembly/transport component CsgG HF553_RS14845 PF01797 Transposase IS200 like HF553_RS14850 PF06496 Protein of unknown function (DUF1097) HF553_RS14855 PF02613 Nitrate reductase delta subunit HF553_RS14860 PF02811 PHP domain HF553_RS14865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF553_RS14930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HF553_RS14930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HF553_RS14935 PF07690 Major Facilitator Superfamily HF553_RS14940 PF06178 Oligogalacturonate-specific porin protein (KdgM) HF553_RS14945 PF01344 Kelch motif HF553_RS14950 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HF553_RS14955 PF00474 Sodium:solute symporter family HF553_RS14960 PF01380 SIS domain HF553_RS14960 PF01418 Helix-turn-helix domain, rpiR family HF553_RS14965 PF02562 PhoH-like protein HF553_RS14970 PF00474 Sodium:solute symporter family HF553_RS14975 PF01619 Proline dehydrogenase HF553_RS14975 PF00171 Aldehyde dehydrogenase family HF553_RS14975 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HF553_RS14975 PF14850 DNA-binding domain of Proline dehydrogenase HF553_RS14985 PF00440 Bacterial regulatory proteins, tetR family HF553_RS14985 PF08362 YcdC-like protein, C-terminal region HF553_RS14990 PF10685 Stress-induced bacterial acidophilic repeat motif HF553_RS14995 PF03358 NADPH-dependent FMN reductase HF553_RS15000 PF13993 YccJ-like protein HF553_RS15005 PF00328 Histidine phosphatase superfamily (branch 2) HF553_RS15010 PF00578 AhpC/TSA family HF553_RS15015 PF13462 Thioredoxin HF553_RS15015 PF06965 Na+/H+ antiporter 1 HF553_RS15020 PF13098 Thioredoxin-like domain HF553_RS15020 PF11412 Disulphide bond corrector protein DsbC HF553_RS15020 PF02683 Cytochrome C biogenesis protein transmembrane region HF553_RS15030 PF00226 DnaJ domain HF553_RS15030 PF01556 DnaJ C terminal domain HF553_RS15045 PF12706 Beta-lactamase superfamily domain HF553_RS15055 PF07690 Major Facilitator Superfamily HF553_RS15060 PF03328 HpcH/HpaI aldolase/citrate lyase family HF553_RS15065 PF01557 Fumarylacetoacetate (FAA) hydrolase family HF553_RS15070 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase HF553_RS15075 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HF553_RS15080 PF00171 Aldehyde dehydrogenase family HF553_RS15085 PF01557 Fumarylacetoacetate (FAA) hydrolase family HF553_RS15090 PF01047 MarR family HF553_RS15095 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal HF553_RS15095 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal HF553_RS15100 PF01613 Flavin reductase like domain HF553_RS15105 PF00576 HIUase/Transthyretin family HF553_RS15110 PF00072 Response regulator receiver domain HF553_RS15110 PF00486 Transcriptional regulatory protein, C terminal HF553_RS15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS15115 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS15120 PF03577 Peptidase family C69 HF553_RS15130 PF13132 Domain of unknown function (DUF3950) HF553_RS15135 PF05925 Enterobacterial virulence protein IpgD HF553_RS15140 PF07824 Type III secretion chaperone domain HF553_RS15150 PF00805 Pentapeptide repeats (8 copies) HF553_RS15165 PF01027 Inhibitor of apoptosis-promoting Bax1 HF553_RS15170 PF04358 DsrC like protein HF553_RS15175 PF00708 Acylphosphatase HF553_RS15180 PF12833 Helix-turn-helix domain HF553_RS15185 PF01161 Phosphatidylethanolamine-binding protein HF553_RS15190 PF17785 PUA-like domain HF553_RS15190 PF10672 S-adenosylmethionine-dependent methyltransferase HF553_RS15195 PF08755 Hemimethylated DNA-binding protein YccV like HF553_RS15200 PF13380 CoA binding domain HF553_RS15205 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HF553_RS15210 PF02142 MGS-like domain HF553_RS15215 PF12462 DNA helicase IV / RNA helicase N terminal HF553_RS15215 PF13361 UvrD-like helicase C-terminal domain HF553_RS15215 PF00580 UvrD/REP helicase N-terminal domain HF553_RS15220 PF03733 Inner membrane component domain HF553_RS15225 PF12805 FUSC-like inner membrane protein yccS HF553_RS15230 PF04993 TfoX N-terminal domain HF553_RS15230 PF04994 TfoX C-terminal domain HF553_RS15235 PF03846 Cell division inhibitor SulA HF553_RS15240 PF01389 OmpA-like transmembrane domain HF553_RS15240 PF00691 OmpA family HF553_RS15245 PF17414 MatP C-terminal ribbon-helix-helix domain HF553_RS15245 PF06303 MatP N-terminal domain HF553_RS15250 PF13654 AAA domain HF553_RS15250 PF05362 Lon protease (S16) C-terminal proteolytic domain HF553_RS15255 PF07977 FabA-like domain HF553_RS15260 PF04957 Ribosome modulation factor HF553_RS15265 PF03886 ABC-type transport auxiliary lipoprotein component HF553_RS15270 PF02470 MlaD protein HF553_RS15275 PF04403 Paraquat-inducible protein A HF553_RS15280 PF12848 ABC transporter HF553_RS15280 PF16326 ABC transporter C-terminal domain HF553_RS15280 PF00005 ABC transporter HF553_RS15285 PF02926 THUMP domain HF553_RS15285 PF10672 S-adenosylmethionine-dependent methyltransferase HF553_RS15285 PF01170 Putative RNA methylase family UPF0020 HF553_RS15290 PF03473 MOSC domain HF553_RS15290 PF03476 MOSC N-terminal beta barrel domain HF553_RS15290 PF00111 2Fe-2S iron-sulfur cluster binding domain HF553_RS15295 PF07126 Cell-division protein ZapC HF553_RS15300 PF01180 Dihydroorotate dehydrogenase HF553_RS15305 PF11940 Domain of unknown function (DUF3458) Ig-like fold HF553_RS15305 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HF553_RS15305 PF01433 Peptidase family M1 domain HF553_RS15310 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HF553_RS15310 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HF553_RS15315 PF01336 OB-fold nucleic acid binding domain HF553_RS15315 PF00152 tRNA synthetases class II (D, K and N) HF553_RS15320 PF00267 Gram-negative porin HF553_RS15325 PF00155 Aminotransferase class I and II HF553_RS15330 PF00753 Metallo-beta-lactamase superfamily HF553_RS15335 PF05951 Bacterial protein of unknown function (DUF882) HF553_RS15340 PF03734 L,D-transpeptidase catalytic domain HF553_RS15340 PF01471 Putative peptidoglycan binding domain HF553_RS15345 PF16330 MukB hinge domain HF553_RS15345 PF04310 MukB N-terminal HF553_RS15350 PF04288 MukE-like family HF553_RS15355 PF17192 MukF middle domain HF553_RS15355 PF03882 MukF winged-helix domain HF553_RS15355 PF17193 MukF C-terminal domain HF553_RS15360 PF13847 Methyltransferase domain HF553_RS15365 PF02698 DUF218 domain HF553_RS15370 PF01636 Phosphotransferase enzyme family HF553_RS15375 PF02348 Cytidylyltransferase HF553_RS15380 PF03966 Trm112p-like protein HF553_RS15385 PF06224 Winged helix DNA-binding domain HF553_RS15390 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HF553_RS15395 PF00005 ABC transporter HF553_RS15395 PF00664 ABC transporter transmembrane region HF553_RS15400 PF00753 Metallo-beta-lactamase superfamily HF553_RS15400 PF03772 Competence protein HF553_RS15405 PF00216 Bacterial DNA-binding protein HF553_RS15410 PF00575 S1 RNA binding domain HF553_RS15415 PF02224 Cytidylate kinase HF553_RS15420 PF01435 Peptidase family M48 HF553_RS15425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HF553_RS15430 PF00266 Aminotransferase class-V HF553_RS15435 PF04239 Protein of unknown function (DUF421) HF553_RS15440 PF18381 YcaO cyclodehydratase C-terminal domain HF553_RS15440 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HF553_RS15445 PF01226 Formate/nitrite transporter HF553_RS15450 PF01228 Glycine radical HF553_RS15450 PF02901 Pyruvate formate lyase-like HF553_RS15455 PF01797 Transposase IS200 like HF553_RS15460 PF11047 Salmonella outer protein D HF553_RS15465 PF04055 Radical SAM superfamily HF553_RS15470 PF13520 Amino acid permease HF553_RS15475 PF07690 Major Facilitator Superfamily HF553_RS15480 PF04976 DMSO reductase anchor subunit (DmsC) HF553_RS15485 PF12800 4Fe-4S binding domain HF553_RS15485 PF13247 4Fe-4S dicluster domain HF553_RS15490 PF00384 Molybdopterin oxidoreductase HF553_RS15490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF553_RS15490 PF01568 Molydopterin dinucleotide binding domain HF553_RS15495 PF02403 Seryl-tRNA synthetase N-terminal domain HF553_RS15495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HF553_RS15500 PF16193 AAA C-terminal domain HF553_RS15500 PF12002 MgsA AAA+ ATPase C terminal HF553_RS15500 PF00004 ATPase family associated with various cellular activities (AAA) HF553_RS15505 PF03548 Outer membrane lipoprotein carrier protein LolA HF553_RS15510 PF01580 FtsK/SpoIIIE family HF553_RS15510 PF09397 Ftsk gamma domain HF553_RS15510 PF17854 FtsK alpha domain HF553_RS15510 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HF553_RS15515 PF01037 Lrp/AsnC ligand binding domain HF553_RS15520 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS15525 PF00664 ABC transporter transmembrane region HF553_RS15525 PF00005 ABC transporter HF553_RS15530 PF00664 ABC transporter transmembrane region HF553_RS15530 PF00005 ABC transporter HF553_RS15535 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HF553_RS15545 PF01176 Translation initiation factor 1A / IF-1 HF553_RS15550 PF03466 LysR substrate binding domain HF553_RS15550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS15555 PF05726 Pirin C-terminal cupin domain HF553_RS15555 PF02678 Pirin HF553_RS15560 PF00857 Isochorismatase family HF553_RS15580 PF07724 AAA domain (Cdc48 subfamily) HF553_RS15580 PF00004 ATPase family associated with various cellular activities (AAA) HF553_RS15580 PF17871 AAA lid domain HF553_RS15580 PF10431 C-terminal, D2-small domain, of ClpB protein HF553_RS15580 PF02861 Clp amino terminal domain, pathogenicity island component HF553_RS15585 PF02617 ATP-dependent Clp protease adaptor protein ClpS HF553_RS15590 PF00313 'Cold-shock' DNA-binding domain HF553_RS15595 PF00005 ABC transporter HF553_RS15595 PF12704 MacB-like periplasmic core domain HF553_RS15595 PF02687 FtsX-like permease family HF553_RS15600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF553_RS15605 PF04393 Protein of unknown function (DUF535) HF553_RS15610 PF11398 Protein of unknown function (DUF2813) HF553_RS15615 PF03956 Lysine exporter LysO HF553_RS15620 PF03063 Prismane/CO dehydrogenase family HF553_RS15625 PF00970 Oxidoreductase FAD-binding domain HF553_RS15625 PF00175 Oxidoreductase NAD-binding domain HF553_RS15625 PF00111 2Fe-2S iron-sulfur cluster binding domain HF553_RS15630 PF00205 Thiamine pyrophosphate enzyme, central domain HF553_RS15630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF553_RS15630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF553_RS15635 PF01212 Beta-eliminating lyase HF553_RS15640 PF11066 Protein of unknown function (DUF2867) HF553_RS15640 PF13460 NAD(P)H-binding HF553_RS15645 PF01370 NAD dependent epimerase/dehydratase family HF553_RS15650 PF01510 N-acetylmuramoyl-L-alanine amidase HF553_RS15655 PF01906 Putative heavy-metal-binding HF553_RS15660 PF12883 Protein of unknown function (DUF3828) HF553_RS15665 PF00005 ABC transporter HF553_RS15670 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF553_RS15675 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS15680 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS15685 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF553_RS15700 PF03611 PTS system sugar-specific permease component HF553_RS15705 PF05958 tRNA (Uracil-5-)-methyltransferase HF553_RS15710 PF10767 Protein of unknown function (DUF2593) HF553_RS15715 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS15720 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS15725 PF00005 ABC transporter HF553_RS15725 PF08402 TOBE domain HF553_RS15730 PF13416 Bacterial extracellular solute-binding protein HF553_RS15735 PF10722 Putative bacterial sensory transduction regulator HF553_RS15740 PF08443 RimK-like ATP-grasp domain HF553_RS15740 PF18030 RimK PreATP-grasp domain HF553_RS15745 PF00881 Nitroreductase family HF553_RS15750 PF07214 Protein of unknown function (DUF1418) HF553_RS15755 PF00462 Glutaredoxin HF553_RS15760 PF11045 Putative inner membrane protein of Enterobacteriaceae HF553_RS15765 PF02080 TrkA-C domain HF553_RS15765 PF06826 Predicted Permease Membrane Region HF553_RS15770 PF00440 Bacterial regulatory proteins, tetR family HF553_RS15775 PF07690 Major Facilitator Superfamily HF553_RS15785 PF07690 Major Facilitator Superfamily HF553_RS15790 PF01569 PAP2 superfamily HF553_RS15795 PF00455 DeoR C terminal sensor domain HF553_RS15795 PF08220 DeoR-like helix-turn-helix domain HF553_RS15800 PF00768 D-alanyl-D-alanine carboxypeptidase HF553_RS15800 PF07943 Penicillin-binding protein 5, C-terminal domain HF553_RS15805 PF13417 Glutathione S-transferase, N-terminal domain HF553_RS15805 PF00043 Glutathione S-transferase, C-terminal domain HF553_RS15810 PF07995 Glucose / Sorbosone dehydrogenase HF553_RS15815 PF10799 Biofilm formation protein (YliH/bssR) HF553_RS15820 PF18693 TRAM domain HF553_RS15820 PF04055 Radical SAM superfamily HF553_RS15820 PF00919 Uncharacterized protein family UPF0004 HF553_RS15825 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS15825 PF12911 N-terminal TM domain of oligopeptide transport permease C HF553_RS15830 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS15835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF553_RS15840 PF00005 ABC transporter HF553_RS15840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF553_RS15845 PF01112 Asparaginase HF553_RS15850 PF03454 MoeA C-terminal region (domain IV) HF553_RS15850 PF00994 Probable molybdopterin binding domain HF553_RS15850 PF03453 MoeA N-terminal region (domain I and II) HF553_RS15855 PF00899 ThiF family HF553_RS15860 PF04055 Radical SAM superfamily HF553_RS15865 PF02901 Pyruvate formate lyase-like HF553_RS15865 PF01228 Glycine radical HF553_RS15875 PF07350 Protein of unknown function (DUF1479) HF553_RS15880 PF00005 ABC transporter HF553_RS15880 PF12848 ABC transporter HF553_RS15885 PF17969 L,D-transpeptidase C-terminal domain HF553_RS15885 PF03734 L,D-transpeptidase catalytic domain HF553_RS15890 PF03600 Citrate transporter HF553_RS15895 PF02742 Iron dependent repressor, metal binding and dimerisation domain HF553_RS15895 PF01325 Iron dependent repressor, N-terminal DNA binding domain HF553_RS15905 PF00884 Sulfatase HF553_RS15910 PF13505 Outer membrane protein beta-barrel domain HF553_RS15915 PF00892 EamA-like transporter family HF553_RS15920 PF00210 Ferritin-like domain HF553_RS15925 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF553_RS15930 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS15935 PF00005 ABC transporter HF553_RS15940 PF00924 Mechanosensitive ion channel HF553_RS15945 PF05971 RNA methyltransferase HF553_RS15950 PF01258 Prokaryotic dksA/traR C4-type zinc finger HF553_RS15955 PF07338 Protein of unknown function (DUF1471) HF553_RS15960 PF02885 Glycosyl transferase family, helical bundle domain HF553_RS15965 PF13307 Helicase C-terminal domain HF553_RS15965 PF06733 DEAD_2 HF553_RS15970 PF00271 Helicase conserved C-terminal domain HF553_RS15970 PF00270 DEAD/DEAH box helicase HF553_RS15975 PF09209 Tetracyclin repressor-like, C-terminal domain HF553_RS15975 PF00440 Bacterial regulatory proteins, tetR family HF553_RS15980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF553_RS15985 PF00005 ABC transporter HF553_RS16000 PF11076 Putative inner membrane protein YbhQ HF553_RS16005 PF03372 Endonuclease/Exonuclease/phosphatase family HF553_RS16010 PF13091 PLD-like domain HF553_RS16015 PF03706 Lysylphosphatidylglycerol synthase TM region HF553_RS16030 PF01027 Inhibitor of apoptosis-promoting Bax1 HF553_RS16035 PF02391 MoaE protein HF553_RS16040 PF02597 ThiS family HF553_RS16045 PF01967 MoaC family HF553_RS16050 PF00994 Probable molybdopterin binding domain HF553_RS16055 PF04055 Radical SAM superfamily HF553_RS16055 PF06463 Molybdenum Cofactor Synthesis C HF553_RS16060 PF01933 Uncharacterised protein family UPF0052 HF553_RS16065 PF12468 Type III secretion system leucine rich repeat protein HF553_RS16065 PF14496 C-terminal novel E3 ligase, LRR-interacting HF553_RS16070 PF04851 Type III restriction enzyme, res subunit HF553_RS16070 PF17757 UvrB interaction domain HF553_RS16070 PF12344 Ultra-violet resistance protein B HF553_RS16070 PF02151 UvrB/uvrC motif HF553_RS16070 PF00271 Helicase conserved C-terminal domain HF553_RS16080 PF08241 Methyltransferase domain HF553_RS16085 PF00155 Aminotransferase class I and II HF553_RS16090 PF04055 Radical SAM superfamily HF553_RS16090 PF06968 Biotin and Thiamin Synthesis associated domain HF553_RS16095 PF00202 Aminotransferase class-III HF553_RS16100 PF01161 Phosphatidylethanolamine-binding protein HF553_RS16105 PF00221 Aromatic amino acid lyase HF553_RS16110 PF17392 Urocanase C-terminal domain HF553_RS16110 PF01175 Urocanase Rossmann-like domain HF553_RS16110 PF17391 Urocanase N-terminal domain HF553_RS16115 PF00392 Bacterial regulatory proteins, gntR family HF553_RS16115 PF07702 UTRA domain HF553_RS16120 PF00491 Arginase family HF553_RS16125 PF01979 Amidohydrolase family HF553_RS16130 PF01095 Pectinesterase HF553_RS16135 PF10282 Lactonase, 7-bladed beta-propeller HF553_RS16145 PF03459 TOBE domain HF553_RS16145 PF00005 ABC transporter HF553_RS16150 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS16160 PF10766 Multidrug efflux pump-associated protein AcrZ HF553_RS16165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS16165 PF03459 TOBE domain HF553_RS16170 PF00005 ABC transporter HF553_RS16180 PF16363 GDP-mannose 4,6 dehydratase HF553_RS16185 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HF553_RS16185 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HF553_RS16190 PF10509 Galactokinase galactose-binding signature HF553_RS16190 PF08544 GHMP kinases C terminal HF553_RS16190 PF00288 GHMP kinases N terminal domain HF553_RS16195 PF01263 Aldose 1-epimerase HF553_RS16200 PF00300 Histidine phosphatase superfamily (branch 1) HF553_RS16205 PF00005 ABC transporter HF553_RS16210 PF01032 FecCD transport family HF553_RS16215 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HF553_RS16220 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HF553_RS16225 PF00364 Biotin-requiring enzyme HF553_RS16225 PF02436 Conserved carboxylase domain HF553_RS16225 PF00682 HMGL-like HF553_RS16230 PF04277 Oxaloacetate decarboxylase, gamma chain HF553_RS16235 PF03600 Citrate transporter HF553_RS16235 PF02080 TrkA-C domain HF553_RS16240 PF03466 LysR substrate binding domain HF553_RS16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS16245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS16245 PF03466 LysR substrate binding domain HF553_RS16250 PF05681 Fumarate hydratase (Fumerase) HF553_RS16255 PF05681 Fumarate hydratase (Fumerase) HF553_RS16255 PF05683 Fumarase C-terminus HF553_RS16260 PF00793 DAHP synthetase I family HF553_RS16265 PF13985 YbgS-like protein HF553_RS16270 PF01545 Cation efflux family HF553_RS16275 PF04973 Nicotinamide mononucleotide transporter HF553_RS16280 PF02445 Quinolinate synthetase A protein HF553_RS16315 PF13174 Tetratricopeptide repeat HF553_RS16315 PF16331 TolA binding protein trimerisation HF553_RS16320 PF00691 OmpA family HF553_RS16325 PF04052 TolB amino-terminal domain HF553_RS16325 PF07676 WD40-like Beta Propeller Repeat HF553_RS16330 PF06519 TolA C-terminal HF553_RS16335 PF02472 Biopolymer transport protein ExbD/TolR HF553_RS16340 PF01618 MotA/TolQ/ExbB proton channel family HF553_RS16345 PF03061 Thioesterase superfamily HF553_RS16350 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HF553_RS16355 PF08173 Membrane bound YbgT-like protein HF553_RS16360 PF02322 Cytochrome bd terminal oxidase subunit II HF553_RS16365 PF01654 Cytochrome bd terminal oxidase subunit I HF553_RS16370 PF00549 CoA-ligase HF553_RS16370 PF02629 CoA binding domain HF553_RS16375 PF08442 ATP-grasp domain HF553_RS16375 PF00549 CoA-ligase HF553_RS16380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HF553_RS16380 PF02817 e3 binding domain HF553_RS16380 PF00364 Biotin-requiring enzyme HF553_RS16385 PF02779 Transketolase, pyrimidine binding domain HF553_RS16385 PF16078 2-oxoglutarate dehydrogenase N-terminus HF553_RS16385 PF16870 2-oxoglutarate dehydrogenase C-terminal HF553_RS16385 PF00676 Dehydrogenase E1 component HF553_RS16390 PF13085 2Fe-2S iron-sulfur cluster binding domain HF553_RS16395 PF02910 Fumarate reductase flavoprotein C-term HF553_RS16395 PF00890 FAD binding domain HF553_RS16400 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HF553_RS16405 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HF553_RS16415 PF00285 Citrate synthase, C-terminal domain HF553_RS16420 PF05145 Transition state regulatory protein AbrB HF553_RS16425 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HF553_RS16425 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HF553_RS16425 PF06827 Zinc finger found in FPG and IleRS HF553_RS16430 PF03746 LamB/YcsF family HF553_RS16435 PF02626 Carboxyltransferase domain, subdomain A and B HF553_RS16440 PF02682 Carboxyltransferase domain, subdomain C and D HF553_RS16445 PF01784 NIF3 (NGG1p interacting factor 3) HF553_RS16450 PF00854 POT family HF553_RS16455 PF03441 FAD binding domain of DNA photolyase HF553_RS16455 PF00875 DNA photolyase HF553_RS16460 PF10725 Protein of unknown function (DUF2517) HF553_RS16465 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) HF553_RS16470 PF03814 Potassium-transporting ATPase A subunit HF553_RS16480 PF02669 K+-transporting ATPase, c chain HF553_RS16485 PF13493 Domain of unknown function (DUF4118) HF553_RS16485 PF13492 GAF domain HF553_RS16485 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS16485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS16485 PF02702 Osmosensitive K+ channel His kinase sensor domain HF553_RS16490 PF00486 Transcriptional regulatory protein, C terminal HF553_RS16490 PF00072 Response regulator receiver domain HF553_RS16505 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HF553_RS16505 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HF553_RS16505 PF01276 Orn/Lys/Arg decarboxylase, major domain HF553_RS16510 PF13520 Amino acid permease HF553_RS16520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HF553_RS16520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HF553_RS16520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HF553_RS16520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HF553_RS16525 PF03925 SeqA protein C-terminal domain HF553_RS16525 PF17206 SeqA protein N-terminal domain HF553_RS16530 PF12697 Alpha/beta hydrolase family HF553_RS16535 PF01402 Ribbon-helix-helix protein, copG family HF553_RS16540 PF00258 Flavodoxin HF553_RS16545 PF01475 Ferric uptake regulator family HF553_RS16550 PF03466 LysR substrate binding domain HF553_RS16550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS16555 PF00890 FAD binding domain HF553_RS16555 PF14537 Cytochrome c3 HF553_RS16565 PF07690 Major Facilitator Superfamily HF553_RS16570 PF13982 YbfN-like lipoprotein HF553_RS16575 PF03573 outer membrane porin, OprD family HF553_RS16580 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HF553_RS16580 PF00749 tRNA synthetases class I (E and Q), catalytic domain HF553_RS16585 PF00367 phosphotransferase system, EIIB HF553_RS16585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HF553_RS16585 PF02378 Phosphotransferase system, EIIC HF553_RS16590 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HF553_RS16595 PF01979 Amidohydrolase family HF553_RS16600 PF01047 MarR family HF553_RS16600 PF00480 ROK family HF553_RS16605 PF13344 Haloacid dehalogenase-like hydrolase HF553_RS16610 PF00733 Asparagine synthase HF553_RS16610 PF13537 Glutamine amidotransferase domain HF553_RS16645 PF01494 FAD binding domain HF553_RS16650 PF00919 Uncharacterized protein family UPF0004 HF553_RS16650 PF04055 Radical SAM superfamily HF553_RS16650 PF01938 TRAM domain HF553_RS16655 PF02562 PhoH-like protein HF553_RS16660 PF02130 Uncharacterized protein family UPF0054 HF553_RS16665 PF03471 Transporter associated domain HF553_RS16665 PF00571 CBS domain HF553_RS16670 PF00795 Carbon-nitrogen hydrolase HF553_RS16675 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF553_RS16680 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS16685 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS16690 PF00005 ABC transporter HF553_RS16695 PF01156 Inosine-uridine preferring nucleoside hydrolase HF553_RS16705 PF07295 Zinc-ribbon containing domain HF553_RS16710 PF00158 Sigma-54 interaction domain HF553_RS16710 PF00989 PAS fold HF553_RS16710 PF02954 Bacterial regulatory protein, Fis family HF553_RS16715 PF03812 2-keto-3-deoxygluconate permease HF553_RS16720 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HF553_RS16730 PF13603 Leucyl-tRNA synthetase, Domain 2 HF553_RS16730 PF00133 tRNA synthetases class I (I, L, M and V) HF553_RS16730 PF08264 Anticodon-binding domain of tRNA HF553_RS16735 PF04390 Lipopolysaccharide-assembly HF553_RS16740 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HF553_RS16740 PF06144 DNA polymerase III, delta subunit HF553_RS16745 PF01467 Cytidylyltransferase-like HF553_RS16750 PF00155 Aminotransferase class I and II HF553_RS16755 PF00300 Histidine phosphatase superfamily (branch 1) HF553_RS16765 PF02590 Predicted SPOUT methyltransferase HF553_RS16770 PF00905 Penicillin binding protein transpeptidase domain HF553_RS16770 PF03717 Penicillin-binding Protein dimerisation domain HF553_RS16775 PF01098 Cell cycle protein HF553_RS16780 PF03330 Lytic transglycolase HF553_RS16780 PF05036 Sporulation related domain HF553_RS16785 PF07943 Penicillin-binding protein 5, C-terminal domain HF553_RS16785 PF00768 D-alanyl-D-alanine carboxypeptidase HF553_RS16790 PF04359 Protein of unknown function (DUF493) HF553_RS16795 PF03099 Biotin/lipoate A/B protein ligase family HF553_RS16800 PF03466 LysR substrate binding domain HF553_RS16800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS16805 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HF553_RS16805 PF04055 Radical SAM superfamily HF553_RS16810 PF02416 mttA/Hcf106 family HF553_RS16815 PF00795 Carbon-nitrogen hydrolase HF553_RS16820 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HF553_RS16825 PF00313 'Cold-shock' DNA-binding domain HF553_RS16830 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP HF553_RS16835 PF03606 C4-dicarboxylate anaerobic carrier HF553_RS16840 PF12431 Transcriptional regulator HF553_RS16840 PF00072 Response regulator receiver domain HF553_RS16845 PF17203 Single cache domain 3 HF553_RS16845 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HF553_RS16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS16845 PF00989 PAS fold HF553_RS16850 PF08218 Citrate lyase ligase C-terminal domain HF553_RS16855 PF06857 Malonate decarboxylase delta subunit (MdcD) HF553_RS16860 PF03328 HpcH/HpaI aldolase/citrate lyase family HF553_RS16865 PF04223 Citrate lyase, alpha subunit (CitF) HF553_RS16870 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HF553_RS16875 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HF553_RS16880 PF00939 Sodium:sulfate symporter transmembrane region HF553_RS16885 PF00445 Ribonuclease T2 family HF553_RS16890 PF01272 Transcription elongation factor, GreA/GreB, C-term HF553_RS16890 PF14760 Rnk N-terminus HF553_RS16895 PF13823 Alcohol dehydrogenase GroES-associated HF553_RS16895 PF00107 Zinc-binding dehydrogenase HF553_RS16895 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS16900 PF00582 Universal stress protein family HF553_RS16910 PF13247 4Fe-4S dicluster domain HF553_RS16915 PF00384 Molybdopterin oxidoreductase HF553_RS16915 PF01568 Molydopterin dinucleotide binding domain HF553_RS16915 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF553_RS16925 PF13192 Thioredoxin domain HF553_RS16925 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS16930 PF10417 C-terminal domain of 1-Cys peroxiredoxin HF553_RS16930 PF00578 AhpC/TSA family HF553_RS16935 PF13098 Thioredoxin-like domain HF553_RS16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS16940 PF03466 LysR substrate binding domain HF553_RS16945 PF11922 Domain of unknown function (DUF3440) HF553_RS16945 PF01507 Phosphoadenosine phosphosulfate reductase family HF553_RS16950 PF02195 ParB-like nuclease domain HF553_RS16955 PF00155 Aminotransferase class I and II HF553_RS16960 PF00465 Iron-containing alcohol dehydrogenase HF553_RS16965 PF04328 Selenoprotein, putative HF553_RS16970 PF02554 Carbon starvation protein CstA HF553_RS16970 PF13722 5TM C-terminal transporter carbon starvation CstA HF553_RS16975 PF03061 Thioesterase superfamily HF553_RS16985 PF00857 Isochorismatase family HF553_RS16985 PF00550 Phosphopantetheine attachment site HF553_RS16990 PF13193 AMP-binding enzyme C-terminal domain HF553_RS16990 PF00501 AMP-binding enzyme HF553_RS16995 PF00425 chorismate binding enzyme HF553_RS17000 PF01497 Periplasmic binding protein HF553_RS17005 PF05977 Transmembrane secretion effector HF553_RS17010 PF01032 FecCD transport family HF553_RS17015 PF01032 FecCD transport family HF553_RS17020 PF00005 ABC transporter HF553_RS17025 PF02706 Chain length determinant protein HF553_RS17030 PF00550 Phosphopantetheine attachment site HF553_RS17030 PF00668 Condensation domain HF553_RS17030 PF00975 Thioesterase domain HF553_RS17030 PF13193 AMP-binding enzyme C-terminal domain HF553_RS17030 PF00501 AMP-binding enzyme HF553_RS17035 PF03621 MbtH-like protein HF553_RS17040 PF11806 Domain of unknown function (DUF3327) HF553_RS17040 PF00756 Putative esterase HF553_RS17045 PF07715 TonB-dependent Receptor Plug Domain HF553_RS17045 PF00593 TonB dependent receptor HF553_RS17050 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HF553_RS17050 PF01648 4'-phosphopantetheinyl transferase superfamily HF553_RS17055 PF04107 Glutamate-cysteine ligase family 2(GCS2) HF553_RS17060 PF06643 Protein of unknown function (DUF1158) HF553_RS17065 PF12833 Helix-turn-helix domain HF553_RS17070 PF00440 Bacterial regulatory proteins, tetR family HF553_RS17070 PF16295 Tetracyclin repressor-like, C-terminal domain HF553_RS17075 PF04237 YjbR HF553_RS17080 PF00881 Nitroreductase family HF553_RS17085 PF00657 GDSL-like Lipase/Acylhydrolase HF553_RS17085 PF03797 Autotransporter beta-domain HF553_RS17090 PF00924 Mechanosensitive ion channel HF553_RS17095 PF00324 Amino acid permease HF553_RS17105 PF04224 Protein of unknown function, DUF417 HF553_RS17110 PF07338 Protein of unknown function (DUF1471) HF553_RS17115 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS17115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HF553_RS17120 PF12852 Cupin HF553_RS17120 PF12833 Helix-turn-helix domain HF553_RS17140 PF04138 GtrA-like protein HF553_RS17145 PF00535 Glycosyl transferase family 2 HF553_RS17170 PF00196 Bacterial regulatory proteins, luxR family HF553_RS17185 PF00072 Response regulator receiver domain HF553_RS17185 PF00196 Bacterial regulatory proteins, luxR family HF553_RS17190 PF00419 Fimbrial protein HF553_RS17195 PF00419 Fimbrial protein HF553_RS17200 PF00577 Outer membrane usher protein HF553_RS17200 PF13954 PapC N-terminal domain HF553_RS17200 PF13953 PapC C-terminal domain HF553_RS17205 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS17205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS17215 PF00419 Fimbrial protein HF553_RS17220 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HF553_RS17220 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HF553_RS17230 PF04307 LexA-binding, inner membrane-associated putative hydrolase HF553_RS17245 PF09190 DALR domain HF553_RS17245 PF01406 tRNA synthetases class I (C) catalytic domain HF553_RS17250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HF553_RS17255 PF12850 Calcineurin-like phosphoesterase superfamily domain HF553_RS17260 PF00731 AIR carboxylase HF553_RS17265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HF553_RS17265 PF02222 ATP-grasp domain HF553_RS17270 PF00696 Amino acid kinase family HF553_RS17275 PF11392 Protein of unknown function (DUF2877) HF553_RS17280 PF06545 Protein of unknown function (DUF1116) HF553_RS17285 PF00549 CoA-ligase HF553_RS17285 PF02629 CoA binding domain HF553_RS17290 PF02615 Malate/L-lactate dehydrogenase HF553_RS17295 PF01546 Peptidase family M20/M25/M40 HF553_RS17300 PF07883 Cupin domain HF553_RS17300 PF05899 Protein of unknown function (DUF861) HF553_RS17305 PF02595 Glycerate kinase family HF553_RS17310 PF00860 Permease family HF553_RS17315 PF01979 Amidohydrolase family HF553_RS17320 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HF553_RS17330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF553_RS17330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF553_RS17335 PF01261 Xylose isomerase-like TIM barrel HF553_RS17340 PF00205 Thiamine pyrophosphate enzyme, central domain HF553_RS17340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF553_RS17340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF553_RS17345 PF01614 Bacterial transcriptional regulator HF553_RS17345 PF09339 IclR helix-turn-helix domain HF553_RS17350 PF04115 Ureidoglycolate lyase HF553_RS17355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS17355 PF03466 LysR substrate binding domain HF553_RS17365 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS17370 PF09383 NIL domain HF553_RS17370 PF00005 ABC transporter HF553_RS17375 PF03180 NLPA lipoprotein HF553_RS17390 PF00005 ABC transporter HF553_RS17395 PF13472 GDSL-like Lipase/Acylhydrolase family HF553_RS17400 PF00106 short chain dehydrogenase HF553_RS17405 PF00085 Thioredoxin HF553_RS17410 PF03649 Uncharacterised protein family (UPF0014) HF553_RS17415 PF00005 ABC transporter HF553_RS17420 PF01145 SPFH domain / Band 7 family HF553_RS17420 PF16200 C-terminal region of band_7 HF553_RS17425 PF01957 NfeD-like C-terminal, partner-binding HF553_RS17430 PF13411 MerR HTH family regulatory protein HF553_RS17435 PF00403 Heavy-metal-associated domain HF553_RS17445 PF01963 TraB family HF553_RS17450 PF04073 Aminoacyl-tRNA editing domain HF553_RS17455 PF02872 5'-nucleotidase, C-terminal domain HF553_RS17455 PF00149 Calcineurin-like phosphoesterase HF553_RS17460 PF07690 Major Facilitator Superfamily HF553_RS17465 PF02254 TrkA-N domain HF553_RS17465 PF00999 Sodium/hydrogen exchanger family HF553_RS17470 PF00294 pfkB family carbohydrate kinase HF553_RS17475 PF07859 alpha/beta hydrolase fold HF553_RS17480 PF00762 Ferrochelatase HF553_RS17485 PF05191 Adenylate kinase, active site lid HF553_RS17490 PF00183 Hsp90 protein HF553_RS17490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS17495 PF13662 Toprim domain HF553_RS17495 PF02132 RecR protein HF553_RS17500 PF02575 YbaB/EbfC DNA-binding family HF553_RS17505 PF12169 DNA polymerase III subunits gamma and tau domain III HF553_RS17505 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HF553_RS17505 PF12170 DNA polymerase III tau subunit V interacting with alpha HF553_RS17510 PF00156 Phosphoribosyl transferase domain HF553_RS17515 PF04304 Protein of unknown function (DUF454) HF553_RS17520 PF07445 Primosomal replication protein priC HF553_RS17525 PF10689 Protein of unknown function (DUF2496) HF553_RS17530 PF04754 Putative transposase, YhgA-like HF553_RS17535 PF12795 Mechanosensitive ion channel porin domain HF553_RS17535 PF12794 Mechanosensitive ion channel inner membrane domain 1 HF553_RS17535 PF00924 Mechanosensitive ion channel HF553_RS17540 PF08361 MAATS-type transcriptional repressor, C-terminal region HF553_RS17540 PF00440 Bacterial regulatory proteins, tetR family HF553_RS17545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF553_RS17545 PF00529 HlyD membrane-fusion protein of T1SS HF553_RS17550 PF00873 AcrB/AcrD/AcrF family HF553_RS17555 PF10757 Biofilm formation regulator YbaJ HF553_RS17560 PF05321 Haemolysin expression modulating protein HF553_RS17565 PF12464 Maltose acetyltransferase HF553_RS17565 PF14602 Hexapeptide repeat of succinyl-transferase HF553_RS17570 PF10777 Inner membrane protein YlaC HF553_RS17575 PF00444 Ribosomal protein L36 HF553_RS17580 PF01197 Ribosomal protein L31 HF553_RS17585 PF12792 CSS motif domain associated with EAL HF553_RS17585 PF00563 EAL domain HF553_RS17595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HF553_RS17600 PF09619 Type III secretion system lipoprotein chaperone (YscW) HF553_RS17610 PF00909 Ammonium Transporter Family HF553_RS17615 PF00543 Nitrogen regulatory protein P-II HF553_RS17620 PF00005 ABC transporter HF553_RS17620 PF00664 ABC transporter transmembrane region HF553_RS17625 PF00005 ABC transporter HF553_RS17625 PF00664 ABC transporter transmembrane region HF553_RS17630 PF13404 AsnC-type helix-turn-helix domain HF553_RS17630 PF01037 Lrp/AsnC ligand binding domain HF553_RS17645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF553_RS17645 PF12793 Sugar transport-related sRNA regulator N-term HF553_RS17650 PF06508 Queuosine biosynthesis protein QueC HF553_RS17665 PF13145 PPIC-type PPIASE domain HF553_RS17670 PF00216 Bacterial DNA-binding protein HF553_RS17675 PF02190 ATP-dependent protease La (LON) substrate-binding domain HF553_RS17675 PF05362 Lon protease (S16) C-terminal proteolytic domain HF553_RS17675 PF00004 ATPase family associated with various cellular activities (AAA) HF553_RS17680 PF10431 C-terminal, D2-small domain, of ClpB protein HF553_RS17680 PF06689 ClpX C4-type zinc finger HF553_RS17680 PF07724 AAA domain (Cdc48 subfamily) HF553_RS17685 PF00574 Clp protease HF553_RS17690 PF05698 Bacterial trigger factor protein (TF) C-terminus HF553_RS17690 PF05697 Bacterial trigger factor protein (TF) HF553_RS17690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HF553_RS17695 PF01722 BolA-like protein HF553_RS17700 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HF553_RS17700 PF03923 Uncharacterized lipoprotein HF553_RS17705 PF07690 Major Facilitator Superfamily HF553_RS17710 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HF553_RS17710 PF06481 COX Aromatic Rich Motif HF553_RS17715 PF00115 Cytochrome C and Quinol oxidase polypeptide I HF553_RS17720 PF00510 Cytochrome c oxidase subunit III HF553_RS17725 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HF553_RS17730 PF01040 UbiA prenyltransferase family HF553_RS17750 PF07690 Major Facilitator Superfamily HF553_RS17755 PF04461 Protein of unknown function (DUF520) HF553_RS17760 PF08546 Ketopantoate reductase PanE/ApbA C terminal HF553_RS17760 PF02558 Ketopantoate reductase PanE/ApbA HF553_RS17765 PF01965 DJ-1/PfpI family HF553_RS17775 PF00266 Aminotransferase class-V HF553_RS17780 PF07702 UTRA domain HF553_RS17780 PF00392 Bacterial regulatory proteins, gntR family HF553_RS17785 PF01547 Bacterial extracellular solute-binding protein HF553_RS17790 PF08402 TOBE domain HF553_RS17790 PF00005 ABC transporter HF553_RS17795 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS17800 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS17805 PF02926 THUMP domain HF553_RS17805 PF02568 Thiamine biosynthesis protein (ThiI) HF553_RS17810 PF02609 Exonuclease VII small subunit HF553_RS17815 PF00348 Polyprenyl synthetase HF553_RS17820 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HF553_RS17820 PF02779 Transketolase, pyrimidine binding domain HF553_RS17820 PF02780 Transketolase, C-terminal domain HF553_RS17825 PF00248 Aldo/keto reductase family HF553_RS17830 PF04608 Phosphatidylglycerophosphatase A HF553_RS17835 PF00586 AIR synthase related protein, N-terminal domain HF553_RS17835 PF02769 AIR synthase related protein, C-terminal domain HF553_RS17840 PF01029 NusB family HF553_RS17845 PF00885 6,7-dimethyl-8-ribityllumazine synthase HF553_RS17850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HF553_RS17850 PF01872 RibD C-terminal domain HF553_RS17855 PF03477 ATP cone domain HF553_RS17860 PF11622 Protein of unknown function (DUF3251) HF553_RS17865 PF03502 Nucleoside-specific channel-forming protein, Tsx HF553_RS17875 PF01844 HNH endonuclease HF553_RS17890 PF02355 Protein export membrane protein HF553_RS17890 PF07549 SecD/SecF GG Motif HF553_RS17895 PF07549 SecD/SecF GG Motif HF553_RS17895 PF13721 SecD export protein N-terminal TM region HF553_RS17895 PF02355 Protein export membrane protein HF553_RS17900 PF02699 Preprotein translocase subunit HF553_RS17905 PF01702 Queuine tRNA-ribosyltransferase HF553_RS17910 PF02547 Queuosine biosynthesis protein HF553_RS17915 PF04336 Acyl carrier protein phosphodiesterase HF553_RS17920 PF00578 AhpC/TSA family HF553_RS17920 PF10417 C-terminal domain of 1-Cys peroxiredoxin HF553_RS17930 PF00128 Alpha amylase, catalytic domain HF553_RS17930 PF02903 Alpha amylase, N-terminal ig-like domain HF553_RS17935 PF00324 Amino acid permease HF553_RS17940 PF05525 Branched-chain amino acid transport protein HF553_RS17945 PF00989 PAS fold HF553_RS17945 PF11808 Phosphate regulon sensor protein PhoR HF553_RS17945 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS17945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS17950 PF00072 Response regulator receiver domain HF553_RS17950 PF00486 Transcriptional regulatory protein, C terminal HF553_RS17955 PF00149 Calcineurin-like phosphoesterase HF553_RS17955 PF12320 Type 5 capsule protein repressor C-terminal domain HF553_RS17960 PF13476 AAA domain HF553_RS17965 PF07690 Major Facilitator Superfamily HF553_RS17970 PF00480 ROK family HF553_RS17975 PF04381 Putative exonuclease, RdgC HF553_RS17980 PF06865 Pyrimidine/purine nucleoside phosphorylase HF553_RS17985 PF07302 AroM protein HF553_RS17990 PF16362 YaiA protein HF553_RS17995 PF01202 Shikimate kinase HF553_RS18000 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HF553_RS18005 PF03807 NADP oxidoreductase coenzyme F420-dependent HF553_RS18005 PF14748 Pyrroline-5-carboxylate reductase dimerisation HF553_RS18010 PF05230 MASE2 domain HF553_RS18010 PF00990 Diguanylate cyclase, GGDEF domain HF553_RS18015 PF07769 psiF repeat HF553_RS18020 PF10796 Sigma-S stabilisation anti-adaptor protein HF553_RS18025 PF07690 Major Facilitator Superfamily HF553_RS18035 PF01820 D-ala D-ala ligase N-terminus HF553_RS18035 PF07478 D-ala D-ala ligase C-terminus HF553_RS18040 PF10953 Protein of unknown function (DUF2754) HF553_RS18045 PF10954 Protein of unknown function (DUF2755) HF553_RS18050 PF07759 Protein of unknown function (DUF1615) HF553_RS18055 PF05992 SbmA/BacA-like family HF553_RS18060 PF00144 Beta-lactamase HF553_RS18065 PF15977 Winged helix-turn-helix DNA binding HF553_RS18070 PF03797 Autotransporter beta-domain HF553_RS18075 PF00490 Delta-aminolevulinic acid dehydratase HF553_RS18080 PF13193 AMP-binding enzyme C-terminal domain HF553_RS18080 PF16177 Acetyl-coenzyme A synthetase N-terminus HF553_RS18080 PF00501 AMP-binding enzyme HF553_RS18085 PF03972 MmgE/PrpD family HF553_RS18090 PF00285 Citrate synthase, C-terminal domain HF553_RS18100 PF00158 Sigma-54 interaction domain HF553_RS18100 PF06506 Propionate catabolism activator HF553_RS18100 PF02954 Bacterial regulatory protein, Fis family HF553_RS18105 PF07338 Protein of unknown function (DUF1471) HF553_RS18110 PF01810 LysE type translocator HF553_RS18115 PF07715 TonB-dependent Receptor Plug Domain HF553_RS18115 PF00593 TonB dependent receptor HF553_RS18130 PF02322 Cytochrome bd terminal oxidase subunit II HF553_RS18135 PF01654 Cytochrome bd terminal oxidase subunit I HF553_RS18160 PF18273 Type III R-M EcoP15I C-terminal domain HF553_RS18160 PF01555 DNA methylase HF553_RS18165 PF07690 Major Facilitator Superfamily HF553_RS18175 PF00376 MerR family regulatory protein HF553_RS18175 PF09278 MerR, DNA binding HF553_RS18180 PF00403 Heavy-metal-associated domain HF553_RS18185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF553_RS18190 PF00873 AcrB/AcrD/AcrF family HF553_RS18195 PF02321 Outer membrane efflux protein HF553_RS18215 PF13505 Outer membrane protein beta-barrel domain HF553_RS18230 PF12792 CSS motif domain associated with EAL HF553_RS18230 PF00563 EAL domain HF553_RS18245 PF16970 Type-1 fimbrial protein, A HF553_RS18250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS18250 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS18255 PF00577 Outer membrane usher protein HF553_RS18255 PF13953 PapC C-terminal domain HF553_RS18255 PF13954 PapC N-terminal domain HF553_RS18265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS18265 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS18295 PF06755 CbtA_toxin of type IV toxin-antitoxin system HF553_RS18300 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HF553_RS18305 PF06174 Protein of unknown function (DUF987) HF553_RS18310 PF04002 RadC-like JAB domain HF553_RS18315 PF03230 Antirestriction protein HF553_RS18320 PF06067 Domain of unknown function (DUF932) HF553_RS18325 PF13018 Extended Signal Peptide of Type V secretion system HF553_RS18325 PF03797 Autotransporter beta-domain HF553_RS18325 PF16168 Adhesin of bacterial autotransporter system, probable stalk HF553_RS18385 PF05321 Haemolysin expression modulating protein HF553_RS18440 PF02028 BCCT, betaine/carnitine/choline family transporter HF553_RS18450 PF05598 Transposase domain (DUF772) HF553_RS18450 PF01609 Transposase DDE domain HF553_RS18465 PF13148 Protein of unknown function (DUF3987) HF553_RS18470 PF13148 Protein of unknown function (DUF3987) HF553_RS18495 PF00171 Aldehyde dehydrogenase family HF553_RS18500 PF00696 Amino acid kinase family HF553_RS18500 PF01472 PUA domain HF553_RS18505 PF00267 Gram-negative porin HF553_RS18510 PF07417 Sigma factor-binding transcriptional regulator Crl HF553_RS18515 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) HF553_RS18520 PF00156 Phosphoribosyl transferase domain HF553_RS18525 PF01546 Peptidase family M20/M25/M40 HF553_RS18525 PF07687 Peptidase dimerisation domain HF553_RS18530 PF00472 RF-1 domain HF553_RS18540 PF11799 impB/mucB/samB family C-terminal domain HF553_RS18540 PF00817 impB/mucB/samB family HF553_RS18540 PF11798 IMS family HHH motif HF553_RS18545 PF03734 L,D-transpeptidase catalytic domain HF553_RS18550 PF13230 Glutamine amidotransferases class-II HF553_RS18560 PF13580 SIS domain HF553_RS18565 PF09317 Domain of unknown function (DUF1974) HF553_RS18565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF553_RS18565 PF02770 Acyl-CoA dehydrogenase, middle domain HF553_RS18565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF553_RS18570 PF00795 Carbon-nitrogen hydrolase HF553_RS18580 PF13505 Outer membrane protein beta-barrel domain HF553_RS18595 PF13404 AsnC-type helix-turn-helix domain HF553_RS18595 PF01037 Lrp/AsnC ligand binding domain HF553_RS18635 PF03466 LysR substrate binding domain HF553_RS18635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS18655 PF13954 PapC N-terminal domain HF553_RS18655 PF00577 Outer membrane usher protein HF553_RS18655 PF13953 PapC C-terminal domain HF553_RS18660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS18660 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS18720 PF04717 Type VI secretion system, phage-baseplate injector HF553_RS18720 PF16671 Actin cross-linking domain HF553_RS18765 PF00691 OmpA family HF553_RS18765 PF05736 OprF membrane domain HF553_RS18805 PF07724 AAA domain (Cdc48 subfamily) HF553_RS18805 PF10431 C-terminal, D2-small domain, of ClpB protein HF553_RS18805 PF17871 AAA lid domain HF553_RS18805 PF00004 ATPase family associated with various cellular activities (AAA) HF553_RS18845 PF00929 Exonuclease HF553_RS18850 PF00075 RNase H HF553_RS18855 PF08241 Methyltransferase domain HF553_RS18860 PF00753 Metallo-beta-lactamase superfamily HF553_RS18860 PF16123 Hydroxyacylglutathione hydrolase C-terminus HF553_RS18865 PF01476 LysM domain HF553_RS18865 PF01464 Transglycosylase SLT domain HF553_RS18870 PF08241 Methyltransferase domain HF553_RS18875 PF03372 Endonuclease/Exonuclease/phosphatase family HF553_RS18880 PF07690 Major Facilitator Superfamily HF553_RS18885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS18885 PF03466 LysR substrate binding domain HF553_RS18890 PF00248 Aldo/keto reductase family HF553_RS18930 PF09383 NIL domain HF553_RS18930 PF00005 ABC transporter HF553_RS18935 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS18940 PF03180 NLPA lipoprotein HF553_RS18945 PF16358 RcsF lipoprotein HF553_RS18950 PF01980 tRNA-methyltransferase O HF553_RS18950 PF18389 TrmO C-terminal domain HF553_RS18955 PF04073 Aminoacyl-tRNA editing domain HF553_RS18955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HF553_RS18955 PF03129 Anticodon binding domain HF553_RS18960 PF04170 NlpE N-terminal domain HF553_RS18960 PF17185 NlpE C-terminal OB domain HF553_RS18965 PF00472 RF-1 domain HF553_RS18970 PF07152 YaeQ protein HF553_RS18975 PF06786 Uncharacterised protein family (UPF0253) HF553_RS18980 PF07073 Modulator of Rho-dependent transcription termination (ROF) HF553_RS18985 PF01171 PP-loop family HF553_RS18985 PF11734 TilS substrate C-terminal domain HF553_RS18985 PF09179 TilS substrate binding domain HF553_RS18990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HF553_RS19000 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HF553_RS19000 PF18416 N-acetylglucosamine binding protein domain 2 HF553_RS19005 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HF553_RS19010 PF01336 OB-fold nucleic acid binding domain HF553_RS19010 PF07733 Bacterial DNA polymerase III alpha NTPase domain HF553_RS19010 PF14579 Helix-hairpin-helix motif HF553_RS19010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HF553_RS19010 PF02811 PHP domain HF553_RS19015 PF01351 Ribonuclease HII HF553_RS19020 PF02684 Lipid-A-disaccharide synthetase HF553_RS19025 PF00132 Bacterial transferase hexapeptide (six repeats) HF553_RS19025 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HF553_RS19030 PF07977 FabA-like domain HF553_RS19035 PF00132 Bacterial transferase hexapeptide (six repeats) HF553_RS19035 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HF553_RS19040 PF03938 Outer membrane protein (OmpH-like) HF553_RS19045 PF01103 Surface antigen HF553_RS19045 PF07244 Surface antigen variable number repeat HF553_RS19050 PF17820 PDZ domain HF553_RS19050 PF02163 Peptidase family M50 HF553_RS19060 PF01255 Putative undecaprenyl diphosphate synthase HF553_RS19065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HF553_RS19065 PF13288 DXP reductoisomerase C-terminal domain HF553_RS19065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HF553_RS19070 PF01765 Ribosome recycling factor HF553_RS19075 PF00696 Amino acid kinase family HF553_RS19080 PF00889 Elongation factor TS HF553_RS19085 PF00318 Ribosomal protein S2 HF553_RS19090 PF00557 Metallopeptidase family M24 HF553_RS19095 PF01966 HD domain HF553_RS19095 PF08335 GlnD PII-uridylyltransferase HF553_RS19095 PF01842 ACT domain HF553_RS19095 PF01909 Nucleotidyltransferase domain HF553_RS19100 PF00132 Bacterial transferase hexapeptide (six repeats) HF553_RS19100 PF14602 Hexapeptide repeat of succinyl-transferase HF553_RS19100 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HF553_RS19105 PF00083 Sugar (and other) transporter HF553_RS19105 PF07690 Major Facilitator Superfamily HF553_RS19110 PF11944 Protein of unknown function (DUF3461) HF553_RS19115 PF05651 Putative sugar diacid recognition HF553_RS19115 PF13556 PucR C-terminal helix-turn-helix domain HF553_RS19115 PF17853 GGDEF-like domain HF553_RS19120 PF00595 PDZ domain HF553_RS19125 PF01966 HD domain HF553_RS19125 PF13286 Phosphohydrolase-associated domain HF553_RS19130 PF01048 Phosphorylase superfamily HF553_RS19135 PF01497 Periplasmic binding protein HF553_RS19140 PF03458 UPF0126 domain HF553_RS19145 PF01521 Iron-sulphur cluster biosynthesis HF553_RS19150 PF00654 Voltage gated chloride channel HF553_RS19155 PF00202 Aminotransferase class-III HF553_RS19160 PF11245 Protein of unknown function (DUF2544) HF553_RS19165 PF00419 Fimbrial protein HF553_RS19170 PF00419 Fimbrial protein HF553_RS19175 PF00419 Fimbrial protein HF553_RS19180 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS19180 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS19185 PF00577 Outer membrane usher protein HF553_RS19185 PF13954 PapC N-terminal domain HF553_RS19185 PF13953 PapC C-terminal domain HF553_RS19195 PF01032 FecCD transport family HF553_RS19200 PF01497 Periplasmic binding protein HF553_RS19205 PF00005 ABC transporter HF553_RS19210 PF07715 TonB-dependent Receptor Plug Domain HF553_RS19210 PF00593 TonB dependent receptor HF553_RS19215 PF00905 Penicillin binding protein transpeptidase domain HF553_RS19215 PF00912 Transglycosylase HF553_RS19215 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal HF553_RS19215 PF14814 Bifunctional transglycosylase second domain HF553_RS19220 PF04408 Helicase associated domain (HA2) HF553_RS19220 PF00271 Helicase conserved C-terminal domain HF553_RS19220 PF08482 ATP-dependent helicase C-terminal HF553_RS19220 PF00270 DEAD/DEAH box helicase HF553_RS19225 PF02834 LigT like Phosphoesterase HF553_RS19230 PF17746 SfsA N-terminal OB domain HF553_RS19230 PF03749 Sugar fermentation stimulation protein RE domain HF553_RS19235 PF01258 Prokaryotic dksA/traR C4-type zinc finger HF553_RS19240 PF00749 tRNA synthetases class I (E and Q), catalytic domain HF553_RS19245 PF12627 Probable RNA and SrmB- binding site of polymerase A HF553_RS19245 PF12626 Polymerase A arginine-rich C-terminus HF553_RS19245 PF01743 Poly A polymerase head domain HF553_RS19250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HF553_RS19255 PF02548 Ketopantoate hydroxymethyltransferase HF553_RS19260 PF02569 Pantoate-beta-alanine ligase HF553_RS19265 PF02261 Aspartate decarboxylase HF553_RS19275 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS19275 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS19280 PF13954 PapC N-terminal domain HF553_RS19280 PF00577 Outer membrane usher protein HF553_RS19280 PF13953 PapC C-terminal domain HF553_RS19285 PF00419 Fimbrial protein HF553_RS19305 PF01522 Polysaccharide deacetylase HF553_RS19310 PF03610 PTS system fructose IIA component HF553_RS19315 PF01061 ABC-2 type transporter HF553_RS19320 PF00005 ABC transporter HF553_RS19325 PF00484 Carbonic anhydrase HF553_RS19330 PF00156 Phosphoribosyl transferase domain HF553_RS19335 PF01011 PQQ enzyme repeat HF553_RS19340 PF00394 Multicopper oxidase HF553_RS19340 PF07732 Multicopper oxidase HF553_RS19340 PF07731 Multicopper oxidase HF553_RS19345 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) HF553_RS19350 PF17284 Spermidine synthase tetramerisation domain HF553_RS19355 PF02675 S-adenosylmethionine decarboxylase HF553_RS19360 PF00455 DeoR C terminal sensor domain HF553_RS19360 PF08220 DeoR-like helix-turn-helix domain HF553_RS19365 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HF553_RS19370 PF07005 Sugar-binding N-terminal domain HF553_RS19370 PF17042 Nucleotide-binding C-terminal domain HF553_RS19375 PF03812 2-keto-3-deoxygluconate permease HF553_RS19380 PF06062 Uncharacterised protein family (UPF0231) HF553_RS19385 PF06434 Aconitate hydratase 2 N-terminus HF553_RS19385 PF00330 Aconitase family (aconitate hydratase) HF553_RS19385 PF11791 Aconitate B N-terminal domain HF553_RS19390 PF11737 Protein of unknown function (DUF3300) HF553_RS19405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HF553_RS19405 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS19410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HF553_RS19410 PF00364 Biotin-requiring enzyme HF553_RS19410 PF02817 e3 binding domain HF553_RS19415 PF17831 Pyruvate dehydrogenase E1 component middle domain HF553_RS19415 PF00456 Transketolase, thiamine diphosphate binding domain HF553_RS19420 PF00392 Bacterial regulatory proteins, gntR family HF553_RS19420 PF07729 FCD domain HF553_RS19425 PF00324 Amino acid permease HF553_RS19435 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain HF553_RS19435 PF04616 Glycosyl hydrolases family 43 HF553_RS19440 PF17113 Regulatory signalling modulator protein AmpE HF553_RS19445 PF01510 N-acetylmuramoyl-L-alanine amidase HF553_RS19450 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HF553_RS19450 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HF553_RS19455 PF07963 Prokaryotic N-terminal methylation motif HF553_RS19460 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HF553_RS19460 PF00437 Type II/IV secretion system protein HF553_RS19465 PF00482 Type II secretion system (T2SS), protein F HF553_RS19470 PF00478 IMP dehydrogenase / GMP reductase domain HF553_RS19475 PF01121 Dephospho-CoA kinase HF553_RS19480 PF07072 Cell division protein HF553_RS19485 PF03884 DNA gyrase inhibitor YacG HF553_RS19500 PF00293 NUDIX domain HF553_RS19505 PF07516 SecA Wing and Scaffold domain HF553_RS19505 PF02810 SEC-C motif HF553_RS19505 PF01043 SecA preprotein cross-linking domain HF553_RS19505 PF07517 SecA DEAD-like domain HF553_RS19510 PF06558 Secretion monitor precursor protein (SecM) HF553_RS19515 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HF553_RS19520 PF00091 Tubulin/FtsZ family, GTPase domain HF553_RS19520 PF12327 FtsZ family, C-terminal domain HF553_RS19525 PF02491 SHS2 domain inserted in FTSA HF553_RS19530 PF03799 Cell division protein FtsQ HF553_RS19530 PF08478 POTRA domain, FtsQ-type HF553_RS19535 PF07478 D-ala D-ala ligase C-terminus HF553_RS19535 PF01820 D-ala D-ala ligase N-terminus HF553_RS19540 PF08245 Mur ligase middle domain HF553_RS19540 PF02875 Mur ligase family, glutamate ligase domain HF553_RS19540 PF01225 Mur ligase family, catalytic domain HF553_RS19545 PF04101 Glycosyltransferase family 28 C-terminal domain HF553_RS19545 PF03033 Glycosyltransferase family 28 N-terminal domain HF553_RS19550 PF01098 Cell cycle protein HF553_RS19555 PF08245 Mur ligase middle domain HF553_RS19555 PF02875 Mur ligase family, glutamate ligase domain HF553_RS19560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HF553_RS19560 PF00953 Glycosyl transferase family 4 HF553_RS19565 PF02875 Mur ligase family, glutamate ligase domain HF553_RS19565 PF01225 Mur ligase family, catalytic domain HF553_RS19565 PF08245 Mur ligase middle domain HF553_RS19570 PF08245 Mur ligase middle domain HF553_RS19570 PF01225 Mur ligase family, catalytic domain HF553_RS19570 PF02875 Mur ligase family, glutamate ligase domain HF553_RS19575 PF00905 Penicillin binding protein transpeptidase domain HF553_RS19575 PF03717 Penicillin-binding Protein dimerisation domain HF553_RS19580 PF04999 Cell division protein FtsL HF553_RS19585 PF01795 MraW methylase family HF553_RS19590 PF02381 MraZ protein, putative antitoxin-like HF553_RS19595 PF00356 Bacterial regulatory proteins, lacI family HF553_RS19595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HF553_RS19600 PF10369 Small subunit of acetolactate synthase HF553_RS19605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF553_RS19605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF553_RS19605 PF00205 Thiamine pyrophosphate enzyme, central domain HF553_RS19610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS19610 PF03466 LysR substrate binding domain HF553_RS19615 PF08054 Leucine operon leader peptide HF553_RS19620 PF00682 HMGL-like HF553_RS19620 PF08502 LeuA allosteric (dimerisation) domain HF553_RS19625 PF00180 Isocitrate/isopropylmalate dehydrogenase HF553_RS19630 PF00330 Aconitase family (aconitate hydratase) HF553_RS19635 PF00694 Aconitase C-terminal domain HF553_RS19650 PF12793 Sugar transport-related sRNA regulator N-term HF553_RS19650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF553_RS19660 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS19665 PF00005 ABC transporter HF553_RS19670 PF09335 SNARE associated Golgi protein HF553_RS19675 PF02311 AraC-like ligand binding domain HF553_RS19675 PF12833 Helix-turn-helix domain HF553_RS19680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HF553_RS19685 PF02610 L-arabinose isomerase HF553_RS19685 PF11762 L-arabinose isomerase C-terminal domain HF553_RS19690 PF00596 Class II Aldolase and Adducin N-terminal domain HF553_RS19710 PF00136 DNA polymerase family B HF553_RS19710 PF03104 DNA polymerase family B, exonuclease domain HF553_RS19715 PF18337 RapA N-terminal Tudor like domain HF553_RS19715 PF18339 RapA N-terminal Tudor like domain 1 HF553_RS19715 PF12137 RNA polymerase recycling family C-terminal HF553_RS19715 PF00271 Helicase conserved C-terminal domain HF553_RS19715 PF00176 SNF2 family N-terminal domain HF553_RS19720 PF00849 RNA pseudouridylate synthase HF553_RS19725 PF00226 DnaJ domain HF553_RS19725 PF05099 Tellurite resistance protein TerB HF553_RS19730 PF03968 OstA-like protein HF553_RS19730 PF04453 LPS transport system D HF553_RS19735 PF00639 PPIC-type PPIASE domain HF553_RS19735 PF09312 SurA N-terminal domain HF553_RS19740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HF553_RS19745 PF00398 Ribosomal RNA adenine dimethylase HF553_RS19750 PF04379 ApaG domain HF553_RS19755 PF00149 Calcineurin-like phosphoesterase HF553_RS19760 PF00186 Dihydrofolate reductase HF553_RS19765 PF02254 TrkA-N domain HF553_RS19765 PF00999 Sodium/hydrogen exchanger family HF553_RS19770 PF02525 Flavodoxin-like fold HF553_RS19775 PF00884 Sulfatase HF553_RS19790 PF06004 Bacterial protein of unknown function (DUF903) HF553_RS19795 PF00083 Sugar (and other) transporter HF553_RS19805 PF01494 FAD binding domain HF553_RS19810 PF00766 Electron transfer flavoprotein FAD-binding domain HF553_RS19810 PF01012 Electron transfer flavoprotein domain HF553_RS19815 PF01012 Electron transfer flavoprotein domain HF553_RS19820 PF02028 BCCT, betaine/carnitine/choline family transporter HF553_RS19825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF553_RS19825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF553_RS19825 PF02770 Acyl-CoA dehydrogenase, middle domain HF553_RS19830 PF02515 CoA-transferase family III HF553_RS19835 PF13193 AMP-binding enzyme C-terminal domain HF553_RS19835 PF00501 AMP-binding enzyme HF553_RS19840 PF00378 Enoyl-CoA hydratase/isomerase HF553_RS19845 PF00132 Bacterial transferase hexapeptide (six repeats) HF553_RS19850 PF07180 CaiF/GrlA transcriptional regulator HF553_RS19855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF553_RS19855 PF02142 MGS-like domain HF553_RS19855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HF553_RS19860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HF553_RS19860 PF00117 Glutamine amidotransferase class-I HF553_RS19870 PF05173 Dihydrodipicolinate reductase, C-terminus HF553_RS19870 PF01113 Dihydrodipicolinate reductase, N-terminus HF553_RS19875 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HF553_RS19880 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HF553_RS19885 PF04223 Citrate lyase, alpha subunit (CitF) HF553_RS19890 PF03328 HpcH/HpaI aldolase/citrate lyase family HF553_RS19895 PF06857 Malonate decarboxylase delta subunit (MdcD) HF553_RS19900 PF00583 Acetyltransferase (GNAT) family HF553_RS19900 PF08218 Citrate lyase ligase C-terminal domain HF553_RS19905 PF03390 2-hydroxycarboxylate transporter family HF553_RS19910 PF04277 Oxaloacetate decarboxylase, gamma chain HF553_RS19915 PF00364 Biotin-requiring enzyme HF553_RS19915 PF00682 HMGL-like HF553_RS19915 PF02436 Conserved carboxylase domain HF553_RS19920 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HF553_RS19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS19925 PF17203 Single cache domain 3 HF553_RS19930 PF12431 Transcriptional regulator HF553_RS19930 PF00072 Response regulator receiver domain HF553_RS19935 PF01156 Inosine-uridine preferring nucleoside hydrolase HF553_RS19945 PF02401 LytB protein HF553_RS19950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HF553_RS19955 PF01252 Signal peptidase (SPase) II HF553_RS19960 PF00133 tRNA synthetases class I (I, L, M and V) HF553_RS19960 PF06827 Zinc finger found in FPG and IleRS HF553_RS19960 PF08264 Anticodon-binding domain of tRNA HF553_RS19965 PF01687 Riboflavin kinase HF553_RS19965 PF06574 FAD synthetase HF553_RS19970 PF10837 Protein of unknown function (DUF2575) HF553_RS19975 PF01649 Ribosomal protein S20 HF553_RS19985 PF01055 Glycosyl hydrolases family 31 HF553_RS19990 PF03466 LysR substrate binding domain HF553_RS19990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS19995 PF06965 Na+/H+ antiporter 1 HF553_RS20010 PF13186 Iron-sulfur cluster-binding domain HF553_RS20010 PF04055 Radical SAM superfamily HF553_RS20015 PF16385 Domain of unknown function HF553_RS20015 PF00884 Sulfatase HF553_RS20025 PF02872 5'-nucleotidase, C-terminal domain HF553_RS20025 PF00149 Calcineurin-like phosphoesterase HF553_RS20060 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS20060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS20065 PF16970 Type-1 fimbrial protein, A HF553_RS20070 PF00419 Fimbrial protein HF553_RS20075 PF00419 Fimbrial protein HF553_RS20080 PF13953 PapC C-terminal domain HF553_RS20080 PF00577 Outer membrane usher protein HF553_RS20080 PF13954 PapC N-terminal domain HF553_RS20085 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS20085 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS20090 PF00419 Fimbrial protein HF553_RS20105 PF00704 Glycosyl hydrolases family 18 HF553_RS20125 PF03466 LysR substrate binding domain HF553_RS20125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS20130 PF00226 DnaJ domain HF553_RS20130 PF01556 DnaJ C terminal domain HF553_RS20130 PF00684 DnaJ central domain HF553_RS20135 PF00012 Hsp70 protein HF553_RS20140 PF10807 Protein of unknown function (DUF2541) HF553_RS20145 PF03981 Ubiquinol-cytochrome C chaperone HF553_RS20145 PF13099 Domain of unknown function (DUF3944) HF553_RS20150 PF01184 GPR1/FUN34/yaaH family HF553_RS20155 PF00994 Probable molybdopterin binding domain HF553_RS20160 PF00923 Transaldolase/Fructose-6-phosphate aldolase HF553_RS20165 PF01235 Sodium:alanine symporter family HF553_RS20170 PF03883 Peroxide stress protein YaaA HF553_RS20175 PF00291 Pyridoxal-phosphate dependent enzyme HF553_RS20175 PF14821 Threonine synthase N terminus HF553_RS20180 PF00288 GHMP kinases N terminal domain HF553_RS20180 PF08544 GHMP kinases C terminal HF553_RS20185 PF00742 Homoserine dehydrogenase HF553_RS20185 PF03447 Homoserine dehydrogenase, NAD binding domain HF553_RS20185 PF01842 ACT domain HF553_RS20185 PF13840 ACT domain HF553_RS20185 PF00696 Amino acid kinase family HF553_RS20190 PF08254 Threonine leader peptide HF553_RS20195 PF00588 SpoU rRNA Methylase family HF553_RS20205 PF00072 Response regulator receiver domain HF553_RS20205 PF00486 Transcriptional regulatory protein, C terminal HF553_RS20215 PF15977 Winged helix-turn-helix DNA binding HF553_RS20225 PF02753 Pili assembly chaperone PapD, C-terminal domain HF553_RS20225 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HF553_RS20230 PF13954 PapC N-terminal domain HF553_RS20230 PF13953 PapC C-terminal domain HF553_RS20230 PF00577 Outer membrane usher protein HF553_RS20245 PF06123 Inner membrane protein CreD HF553_RS20250 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS20250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS20250 PF00672 HAMP domain HF553_RS20255 PF00486 Transcriptional regulatory protein, C terminal HF553_RS20255 PF00072 Response regulator receiver domain HF553_RS20260 PF05981 CreA protein HF553_RS20265 PF12833 Helix-turn-helix domain HF553_RS20265 PF06445 GyrI-like small molecule binding domain HF553_RS20270 PF00300 Histidine phosphatase superfamily (branch 1) HF553_RS20275 PF01931 Protein of unknown function DUF84 HF553_RS20280 PF01371 Trp repressor protein HF553_RS20285 PF01464 Transglycosylase SLT domain HF553_RS20285 PF14718 Soluble lytic murein transglycosylase L domain HF553_RS20290 PF12848 ABC transporter HF553_RS20290 PF00005 ABC transporter HF553_RS20295 PF13521 AAA domain HF553_RS20295 PF01381 Helix-turn-helix HF553_RS20300 PF18073 Rubredoxin metal binding domain HF553_RS20305 PF18429 Domain of unknown function (DUF5609) HF553_RS20310 PF10144 Bacterial virulence factor haemolysin HF553_RS20315 PF10437 Bacterial lipoate protein ligase C-terminus HF553_RS20315 PF03099 Biotin/lipoate A/B protein ligase family HF553_RS20325 PF01048 Phosphorylase superfamily HF553_RS20330 PF01676 Metalloenzyme superfamily HF553_RS20335 PF02885 Glycosyl transferase family, helical bundle domain HF553_RS20335 PF00591 Glycosyl transferase family, a/b domain HF553_RS20335 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HF553_RS20340 PF01791 DeoC/LacD family aldolase HF553_RS20345 PF11230 Protein of unknown function (DUF3029) HF553_RS20350 PF04055 Radical SAM superfamily HF553_RS20355 PF01026 TatD related DNase HF553_RS20360 PF01734 Patatin-like phospholipase HF553_RS20365 PF07043 Protein of unknown function (DUF1328) HF553_RS20370 PF04972 BON domain HF553_RS20375 PF16658 Class II release factor RF3, C-terminal domain HF553_RS20375 PF03144 Elongation factor Tu domain 2 HF553_RS20375 PF00009 Elongation factor Tu GTP binding domain HF553_RS20380 PF13419 Haloacid dehalogenase-like hydrolase HF553_RS20385 PF00583 Acetyltransferase (GNAT) family HF553_RS20390 PF03603 DNA polymerase III psi subunit HF553_RS20395 PF05175 Methyltransferase small domain HF553_RS20395 PF08468 Methyltransferase small domain N-terminal HF553_RS20415 PF07256 Protein of unknown function (DUF1435) HF553_RS20420 PF05230 MASE2 domain HF553_RS20420 PF00990 Diguanylate cyclase, GGDEF domain HF553_RS20425 PF11575 FhuF 2Fe-2S C-terminal domain HF553_RS20425 PF06276 Ferric iron reductase FhuF-like transporter HF553_RS20430 PF04073 Aminoacyl-tRNA editing domain HF553_RS20435 PF00196 Bacterial regulatory proteins, luxR family HF553_RS20440 PF00196 Bacterial regulatory proteins, luxR family HF553_RS20445 PF06738 Putative threonine/serine exporter HF553_RS20450 PF12821 Threonine/Serine exporter, ThrE HF553_RS20455 PF17948 DnaT DNA-binding domain HF553_RS20460 PF01695 IstB-like ATP binding protein HF553_RS20465 PF10696 Protein of unknown function (DUF2501) HF553_RS20470 PF00884 Sulfatase HF553_RS20475 PF02203 Tar ligand binding domain homologue HF553_RS20475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF553_RS20475 PF00672 HAMP domain HF553_RS20480 PF13722 5TM C-terminal transporter carbon starvation CstA HF553_RS20480 PF02554 Carbon starvation protein CstA HF553_RS20485 PF04328 Selenoprotein, putative HF553_RS20490 PF02492 CobW/HypB/UreG, nucleotide-binding domain HF553_RS20490 PF07683 Cobalamin synthesis protein cobW C-terminal domain HF553_RS20495 PF02311 AraC-like ligand binding domain HF553_RS20495 PF12833 Helix-turn-helix domain HF553_RS20500 PF01810 LysE type translocator HF553_RS20520 PF00171 Aldehyde dehydrogenase family HF553_RS20525 PF04754 Putative transposase, YhgA-like HF553_RS20530 PF07690 Major Facilitator Superfamily HF553_RS20535 PF04286 Protein of unknown function (DUF445) HF553_RS20540 PF06779 Uncharacterised MFS-type transporter YbfB HF553_RS20545 PF07670 Nucleoside recognition HF553_RS20550 PF07670 Nucleoside recognition HF553_RS20555 PF01979 Amidohydrolase family HF553_RS20560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS20560 PF03466 LysR substrate binding domain HF553_RS20565 PF01177 Asp/Glu/Hydantoin racemase HF553_RS20575 PF00579 tRNA synthetases class I (W and Y) HF553_RS20580 PF07729 FCD domain HF553_RS20580 PF00392 Bacterial regulatory proteins, gntR family HF553_RS20585 PF01738 Dienelactone hydrolase family HF553_RS20590 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HF553_RS20590 PF03625 Domain of unknown function DUF302 HF553_RS20605 PF09857 Putative toxin of bacterial toxin-antitoxin pair HF553_RS20610 PF13847 Methyltransferase domain HF553_RS20615 PF01709 Transcriptional regulator HF553_RS20660 PF00140 Sigma-70 factor, region 1.2 HF553_RS20660 PF04545 Sigma-70, region 4 HF553_RS20660 PF04542 Sigma-70 region 2 HF553_RS20660 PF03979 Sigma-70 factor, region 1.1 HF553_RS20660 PF04539 Sigma-70 region 3 HF553_RS20680 PF00271 Helicase conserved C-terminal domain HF553_RS20680 PF00176 SNF2 family N-terminal domain HF553_RS20685 PF00004 ATPase family associated with various cellular activities (AAA) HF553_RS20690 PF00082 Subtilase family HF553_RS20695 PF01555 DNA methylase HF553_RS20705 PF13356 Arm DNA-binding domain HF553_RS20705 PF00589 Phage integrase family HF553_RS20715 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS20715 PF00107 Zinc-binding dehydrogenase HF553_RS20720 PF01202 Shikimate kinase HF553_RS20725 PF00107 Zinc-binding dehydrogenase HF553_RS20725 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS20730 PF00106 short chain dehydrogenase HF553_RS20735 PF02447 GntP family permease HF553_RS20740 PF00356 Bacterial regulatory proteins, lacI family HF553_RS20745 PF03739 Lipopolysaccharide export system permease LptF/LptG HF553_RS20750 PF03739 Lipopolysaccharide export system permease LptF/LptG HF553_RS20755 PF02789 Cytosol aminopeptidase family, N-terminal domain HF553_RS20755 PF00883 Cytosol aminopeptidase family, catalytic domain HF553_RS20760 PF04364 DNA polymerase III chi subunit, HolC HF553_RS20765 PF08264 Anticodon-binding domain of tRNA HF553_RS20765 PF00133 tRNA synthetases class I (I, L, M and V) HF553_RS20765 PF10458 Valyl tRNA synthetase tRNA binding arm HF553_RS20770 PF05987 Bacterial protein of unknown function (DUF898) HF553_RS20775 PF00583 Acetyltransferase (GNAT) family HF553_RS20780 PF12276 Protein of unknown function (DUF3617) HF553_RS20785 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HF553_RS20790 PF06877 Regulator of ribonuclease activity B HF553_RS20795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HF553_RS20795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HF553_RS20800 PF04074 YhcH/YjgK/YiaL HF553_RS20810 PF00696 Amino acid kinase family HF553_RS20815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HF553_RS20815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HF553_RS20820 PF03606 C4-dicarboxylate anaerobic carrier HF553_RS20825 PF01316 Arginine repressor, DNA binding domain HF553_RS20825 PF02863 Arginine repressor, C-terminal domain HF553_RS20835 PF08052 PyrBI operon leader peptide HF553_RS20840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HF553_RS20840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HF553_RS20845 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HF553_RS20845 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HF553_RS20850 PF01042 Endoribonuclease L-PSP HF553_RS20855 PF00689 Cation transporting ATPase, C-terminus HF553_RS20855 PF00690 Cation transporter/ATPase, N-terminus HF553_RS20860 PF17059 MgtA leader peptide HF553_RS20865 PF00356 Bacterial regulatory proteins, lacI family HF553_RS20870 PF00367 phosphotransferase system, EIIB HF553_RS20870 PF02378 Phosphotransferase system, EIIC HF553_RS20875 PF00128 Alpha amylase, catalytic domain HF553_RS20875 PF11941 Domain of unknown function (DUF3459) HF553_RS20880 PF13597 Anaerobic ribonucleoside-triphosphate reductase HF553_RS20880 PF03477 ATP cone domain HF553_RS20890 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HF553_RS20895 PF04221 RelB antitoxin HF553_RS20900 PF05043 Mga helix-turn-helix domain HF553_RS20900 PF00874 PRD domain HF553_RS20900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HF553_RS20900 PF08279 HTH domain HF553_RS20905 PF07071 KDGP aldolase HF553_RS20910 PF03841 L-seryl-tRNA selenium transferase HF553_RS20915 PF01979 Amidohydrolase family HF553_RS20945 PF07361 Cytochrome b562 HF553_RS20950 PF01523 Putative modulator of DNA gyrase HF553_RS20955 PF04751 Protein of unknown function (DUF615) HF553_RS20960 PF01261 Xylose isomerase-like TIM barrel HF553_RS20970 PF07690 Major Facilitator Superfamily HF553_RS20975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HF553_RS20975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HF553_RS20980 PF00205 Thiamine pyrophosphate enzyme, central domain HF553_RS20980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF553_RS20980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF553_RS20985 PF00294 pfkB family carbohydrate kinase HF553_RS20990 PF07690 Major Facilitator Superfamily HF553_RS20995 PF01261 Xylose isomerase-like TIM barrel HF553_RS21000 PF17189 Glycosyl hydrolase family 30 beta sandwich domain HF553_RS21005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HF553_RS21005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HF553_RS21010 PF01261 Xylose isomerase-like TIM barrel HF553_RS21025 PF00171 Aldehyde dehydrogenase family HF553_RS21030 PF04962 KduI/IolB family HF553_RS21035 PF00083 Sugar (and other) transporter HF553_RS21040 PF00083 Sugar (and other) transporter HF553_RS21045 PF01380 SIS domain HF553_RS21045 PF02685 Glucokinase HF553_RS21045 PF01418 Helix-turn-helix domain, rpiR family HF553_RS21050 PF02875 Mur ligase family, glutamate ligase domain HF553_RS21050 PF01225 Mur ligase family, catalytic domain HF553_RS21050 PF08245 Mur ligase middle domain HF553_RS21055 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HF553_RS21060 PF00719 Inorganic pyrophosphatase HF553_RS21065 PF01979 Amidohydrolase family HF553_RS21070 PF07690 Major Facilitator Superfamily HF553_RS21075 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HF553_RS21080 PF04357 TamB, inner membrane protein subunit of TAM complex HF553_RS21085 PF01103 Surface antigen HF553_RS21085 PF07244 Surface antigen variable number repeat HF553_RS21085 PF17243 POTRA domain TamA domain 1 HF553_RS21090 PF01625 Peptide methionine sulfoxide reductase HF553_RS21095 PF01595 Cyclin M transmembrane N-terminal domain HF553_RS21095 PF03471 Transporter associated domain HF553_RS21095 PF00571 CBS domain HF553_RS21100 PF06526 Protein of unknown function (DUF1107) HF553_RS21105 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HF553_RS21110 PF00459 Inositol monophosphatase family HF553_RS21115 PF02872 5'-nucleotidase, C-terminal domain HF553_RS21115 PF00149 Calcineurin-like phosphoesterase HF553_RS21120 PF01638 HxlR-like helix-turn-helix HF553_RS21125 PF05368 NmrA-like family HF553_RS21130 PF00892 EamA-like transporter family HF553_RS21135 PF01814 Hemerythrin HHE cation binding domain HF553_RS21135 PF04405 Domain of Unknown function (DUF542) HF553_RS21140 PF00324 Amino acid permease HF553_RS21145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HF553_RS21145 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HF553_RS21150 PF08525 Opacity-associated protein A N-terminal motif HF553_RS21150 PF04225 Opacity-associated protein A LysM-like domain HF553_RS21160 PF01281 Ribosomal protein L9, N-terminal domain HF553_RS21160 PF03948 Ribosomal protein L9, C-terminal domain HF553_RS21165 PF01084 Ribosomal protein S18 HF553_RS21170 PF00436 Single-strand binding protein family HF553_RS21175 PF01250 Ribosomal protein S6 HF553_RS21185 PF07338 Protein of unknown function (DUF1471) HF553_RS21190 PF00596 Class II Aldolase and Adducin N-terminal domain HF553_RS21195 PF01261 Xylose isomerase-like TIM barrel HF553_RS21200 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HF553_RS21205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HF553_RS21210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HF553_RS21215 PF03611 PTS system sugar-specific permease component HF553_RS21225 PF08220 DeoR-like helix-turn-helix domain HF553_RS21225 PF00455 DeoR C terminal sensor domain HF553_RS21230 PF00326 Prolyl oligopeptidase family HF553_RS21235 PF07338 Protein of unknown function (DUF1471) HF553_RS21240 PF07338 Protein of unknown function (DUF1471) HF553_RS21245 PF18158 Adaptive response protein AidB N-terminal domain HF553_RS21245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF553_RS21245 PF02770 Acyl-CoA dehydrogenase, middle domain HF553_RS21250 PF03738 Glutathionylspermidine synthase preATP-grasp HF553_RS21255 PF06693 Protein of unknown function (DUF1190) HF553_RS21260 PF03994 Domain of Unknown Function (DUF350) HF553_RS21265 PF10679 Protein of unknown function (DUF2491) HF553_RS21270 PF04012 PspA/IM30 family HF553_RS21275 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) HF553_RS21280 PF00588 SpoU rRNA Methylase family HF553_RS21280 PF08032 RNA 2'-O ribose methyltransferase substrate binding HF553_RS21285 PF00575 S1 RNA binding domain HF553_RS21285 PF17876 Cold shock domain HF553_RS21285 PF08461 Ribonuclease R winged-helix domain HF553_RS21285 PF08206 Ribonuclease B OB domain HF553_RS21285 PF00773 RNB domain HF553_RS21290 PF02082 Transcriptional regulator HF553_RS21295 PF00709 Adenylosuccinate synthetase HF553_RS21300 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HF553_RS21305 PF01145 SPFH domain / Band 7 family HF553_RS21310 PF12221 Bacterial membrane protein N terminal HF553_RS21310 PF01145 SPFH domain / Band 7 family HF553_RS21315 PF13167 GTP-binding GTPase N-terminal HF553_RS21315 PF16360 GTP-binding GTPase Middle Region HF553_RS21315 PF01926 50S ribosome-binding GTPase HF553_RS21320 PF17209 Hfq protein HF553_RS21330 PF01119 DNA mismatch repair protein, C-terminal domain HF553_RS21330 PF08676 MutL C terminal dimerisation domain HF553_RS21335 PF01520 N-acetylmuramoyl-L-alanine amidase HF553_RS21340 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HF553_RS21345 PF03853 YjeF-related protein N-terminus HF553_RS21345 PF01256 Carbohydrate kinase HF553_RS21350 PF08331 Domain of unknown function (DUF1730) HF553_RS21370 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF553_RS21375 PF00929 Exonuclease HF553_RS21380 PF03193 RsgA GTPase HF553_RS21385 PF02666 Phosphatidylserine decarboxylase HF553_RS21390 PF00924 Mechanosensitive ion channel HF553_RS21390 PF12794 Mechanosensitive ion channel inner membrane domain 1 HF553_RS21390 PF12795 Mechanosensitive ion channel porin domain HF553_RS21395 PF10840 Protein of unknown function (DUF2645) HF553_RS21400 PF13520 Amino acid permease HF553_RS21405 PF00152 tRNA synthetases class II (D, K and N) HF553_RS21410 PF00890 FAD binding domain HF553_RS21410 PF02910 Fumarate reductase flavoprotein C-term HF553_RS21415 PF13085 2Fe-2S iron-sulfur cluster binding domain HF553_RS21415 PF13183 4Fe-4S dicluster domain HF553_RS21420 PF02300 Fumarate reductase subunit C HF553_RS21425 PF02313 Fumarate reductase subunit D HF553_RS21430 PF08212 Lipocalin-like domain HF553_RS21435 PF00893 Small Multidrug Resistance protein HF553_RS21440 PF00196 Bacterial regulatory proteins, luxR family HF553_RS21445 PF08085 Entericidin EcnA/B family HF553_RS21450 PF08085 Entericidin EcnA/B family HF553_RS21455 PF09285 Elongation factor P, C-terminal HF553_RS21455 PF08207 Elongation factor P (EF-P) KOW-like domain HF553_RS21455 PF01132 Elongation factor P (EF-P) OB domain HF553_RS21460 PF04055 Radical SAM superfamily HF553_RS21465 PF15922 YjeJ-like HF553_RS21470 PF13698 Domain of unknown function (DUF4156) HF553_RS21475 PF00118 TCP-1/cpn60 chaperonin family HF553_RS21480 PF00166 Chaperonin 10 Kd subunit HF553_RS21485 PF13520 Amino acid permease HF553_RS21490 PF04186 FxsA cytoplasmic membrane protein HF553_RS21495 PF10415 Fumarase C C-terminus HF553_RS21495 PF00206 Lyase HF553_RS21500 PF03605 Anaerobic c4-dicarboxylate membrane transporter HF553_RS21505 PF03091 CutA1 divalent ion tolerance protein HF553_RS21510 PF11412 Disulphide bond corrector protein DsbC HF553_RS21510 PF02683 Cytochrome C biogenesis protein transmembrane region HF553_RS21525 PF00589 Phage integrase family HF553_RS21525 PF13356 Arm DNA-binding domain HF553_RS21530 PF13087 AAA domain HF553_RS21530 PF13091 PLD-like domain HF553_RS21535 PF00884 Sulfatase HF553_RS21540 PF13505 Outer membrane protein beta-barrel domain HF553_RS21650 PF01926 50S ribosome-binding GTPase HF553_RS21655 PF13280 WYL domain HF553_RS21655 PF08220 DeoR-like helix-turn-helix domain HF553_RS21665 PF06006 Bacterial protein of unknown function (DUF905) HF553_RS21670 PF06067 Domain of unknown function (DUF932) HF553_RS21680 PF03230 Antirestriction protein HF553_RS21685 PF04002 RadC-like JAB domain HF553_RS21690 PF06174 Protein of unknown function (DUF987) HF553_RS21700 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A HF553_RS21705 PF06755 CbtA_toxin of type IV toxin-antitoxin system HF553_RS21735 PF01569 PAP2 superfamily HF553_RS21760 PF12833 Helix-turn-helix domain HF553_RS21765 PF00072 Response regulator receiver domain HF553_RS21765 PF00196 Bacterial regulatory proteins, luxR family HF553_RS21780 PF06977 SdiA-regulated HF553_RS21790 PF02613 Nitrate reductase delta subunit HF553_RS21795 PF04976 DMSO reductase anchor subunit (DmsC) HF553_RS21800 PF12800 4Fe-4S binding domain HF553_RS21800 PF13247 4Fe-4S dicluster domain HF553_RS21805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF553_RS21805 PF00384 Molybdopterin oxidoreductase HF553_RS21805 PF01568 Molydopterin dinucleotide binding domain HF553_RS21810 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HF553_RS21810 PF17203 Single cache domain 3 HF553_RS21810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS21810 PF00989 PAS fold HF553_RS21815 PF00072 Response regulator receiver domain HF553_RS21825 PF03605 Anaerobic c4-dicarboxylate membrane transporter HF553_RS21830 PF05683 Fumarase C-terminus HF553_RS21830 PF05681 Fumarate hydratase (Fumerase) HF553_RS21840 PF11975 Family 4 glycosyl hydrolase C-terminal domain HF553_RS21840 PF02056 Family 4 glycosyl hydrolase HF553_RS21845 PF12833 Helix-turn-helix domain HF553_RS21850 PF01276 Orn/Lys/Arg decarboxylase, major domain HF553_RS21850 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HF553_RS21850 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HF553_RS21855 PF12833 Helix-turn-helix domain HF553_RS21860 PF13520 Amino acid permease HF553_RS21865 PF08019 Phosphoethanolamine transferase EptA/EptB HF553_RS21865 PF00884 Sulfatase HF553_RS21870 PF00486 Transcriptional regulatory protein, C terminal HF553_RS21870 PF00072 Response regulator receiver domain HF553_RS21875 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS21875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS21885 PF00083 Sugar (and other) transporter HF553_RS21885 PF08946 Osmosensory transporter coiled coil HF553_RS21890 PF08274 PhnA Zinc-Ribbon HF553_RS21890 PF03831 PhnA domain HF553_RS21895 PF06983 3-demethylubiquinone-9 3-methyltransferase HF553_RS21900 PF00583 Acetyltransferase (GNAT) family HF553_RS21915 PF08238 Sel1 repeat HF553_RS21925 PF00375 Sodium:dicarboxylate symporter family HF553_RS21935 PF03918 Cytochrome C biogenesis protein HF553_RS21940 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HF553_RS21940 PF01578 Cytochrome C assembly protein HF553_RS21945 PF03916 Polysulphide reductase, NrfD HF553_RS21950 PF00037 4Fe-4S binding domain HF553_RS21950 PF13247 4Fe-4S dicluster domain HF553_RS21955 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) HF553_RS21955 PF13435 Cytochrome c554 and c-prime HF553_RS21960 PF02335 Cytochrome c552 HF553_RS21965 PF13193 AMP-binding enzyme C-terminal domain HF553_RS21965 PF16177 Acetyl-coenzyme A synthetase N-terminus HF553_RS21965 PF00501 AMP-binding enzyme HF553_RS21970 PF04341 Protein of unknown function, DUF485 HF553_RS21975 PF00474 Sodium:solute symporter family HF553_RS21980 PF04172 LrgB-like family HF553_RS21985 PF03788 LrgA family HF553_RS21990 PF03466 LysR substrate binding domain HF553_RS21990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS21995 PF00999 Sodium/hydrogen exchanger family HF553_RS22000 PF00860 Permease family HF553_RS22010 PF00376 MerR family regulatory protein HF553_RS22010 PF09278 MerR, DNA binding HF553_RS22015 PF12833 Helix-turn-helix domain HF553_RS22020 PF00563 EAL domain HF553_RS22020 PF12792 CSS motif domain associated with EAL HF553_RS22025 PF15940 Family of unknown function HF553_RS22030 PF00005 ABC transporter HF553_RS22030 PF00664 ABC transporter transmembrane region HF553_RS22060 PF00436 Single-strand binding protein family HF553_RS22065 PF00005 ABC transporter HF553_RS22065 PF17755 UvrA DNA-binding domain HF553_RS22065 PF17760 UvrA interaction domain HF553_RS22080 PF04237 YjbR HF553_RS22085 PF01894 Uncharacterised protein family UPF0047 HF553_RS22090 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HF553_RS22095 PF00155 Aminotransferase class I and II HF553_RS22100 PF01168 Alanine racemase, N-terminal domain HF553_RS22100 PF00842 Alanine racemase, C-terminal domain HF553_RS22105 PF00772 DnaB-like helicase N terminal domain HF553_RS22105 PF03796 DnaB-like helicase C terminal domain HF553_RS22110 PF00107 Zinc-binding dehydrogenase HF553_RS22110 PF08240 Alcohol dehydrogenase GroES-like domain HF553_RS22115 PF09583 Phage shock protein G (Phageshock_PspG) HF553_RS22120 PF01207 Dihydrouridine synthase (Dus) HF553_RS22130 PF01475 Ferric uptake regulator family HF553_RS22135 PF05532 CsbD-like HF553_RS22145 PF01554 MatE HF553_RS22150 PF01726 LexA DNA binding domain HF553_RS22150 PF00717 Peptidase S24-like HF553_RS22155 PF01219 Prokaryotic diacylglycerol kinase HF553_RS22160 PF01553 Acyltransferase HF553_RS22165 PF01040 UbiA prenyltransferase family HF553_RS22170 PF04345 Chorismate lyase HF553_RS22175 PF07148 Maltose operon periplasmic protein precursor (MalM) HF553_RS22180 PF02264 LamB porin HF553_RS22185 PF17912 MalK OB fold domain HF553_RS22185 PF00005 ABC transporter HF553_RS22190 PF01547 Bacterial extracellular solute-binding protein HF553_RS22195 PF14785 Maltose transport system permease protein MalF P2 domain HF553_RS22195 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS22200 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS22205 PF06146 Phosphate-starvation-inducible E HF553_RS22210 PF06082 Exopolysaccharide biosynthesis protein YbjH HF553_RS22215 PF06251 Capsule biosynthesis GfcC HF553_RS22220 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HF553_RS22230 PF00342 Phosphoglucose isomerase HF553_RS22235 PF01842 ACT domain HF553_RS22235 PF00696 Amino acid kinase family HF553_RS22255 PF00455 DeoR C terminal sensor domain HF553_RS22255 PF08220 DeoR-like helix-turn-helix domain HF553_RS22260 PF11656 YjbD family (DUF3811) HF553_RS22265 PF00849 RNA pseudouridylate synthase HF553_RS22265 PF01479 S4 domain HF553_RS22270 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HF553_RS22280 PF03575 Peptidase family S51 HF553_RS22285 PF02690 Na+/Pi-cotransporter HF553_RS22290 PF02310 B12 binding domain HF553_RS22290 PF02574 Homocysteine S-methyltransferase HF553_RS22290 PF02607 B12 binding domain HF553_RS22290 PF02965 Vitamin B12 dependent methionine synthase, activation domain HF553_RS22290 PF00809 Pterin binding enzyme HF553_RS22295 PF01614 Bacterial transcriptional regulator HF553_RS22295 PF09339 IclR helix-turn-helix domain HF553_RS22305 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HF553_RS22310 PF00463 Isocitrate lyase family HF553_RS22315 PF01274 Malate synthase HF553_RS22320 PF04204 Homoserine O-succinyltransferase HF553_RS22325 PF13673 Acetyltransferase (GNAT) domain HF553_RS22350 PF02142 MGS-like domain HF553_RS22350 PF01808 AICARFT/IMPCHase bienzyme HF553_RS22355 PF02843 Phosphoribosylglycinamide synthetase, C domain HF553_RS22355 PF02844 Phosphoribosylglycinamide synthetase, N domain HF553_RS22355 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HF553_RS22360 PF02954 Bacterial regulatory protein, Fis family HF553_RS22360 PF00072 Response regulator receiver domain HF553_RS22360 PF00158 Sigma-54 interaction domain HF553_RS22365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS22365 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS22370 PF13801 Heavy-metal resistance HF553_RS22375 PF07356 Protein of unknown function (DUF1481) HF553_RS22380 PF00216 Bacterial DNA-binding protein HF553_RS22385 PF04222 Protein of unknown function (DUF416) HF553_RS22390 PF04493 Endonuclease V HF553_RS22395 PF01208 Uroporphyrinogen decarboxylase (URO-D) HF553_RS22400 PF09297 NADH pyrophosphatase zinc ribbon domain HF553_RS22400 PF00293 NUDIX domain HF553_RS22405 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HF553_RS22410 PF01964 Radical SAM ThiC family HF553_RS22410 PF13667 ThiC-associated domain HF553_RS22415 PF02581 Thiamine monophosphate synthase HF553_RS22420 PF00899 ThiF family HF553_RS22425 PF02597 ThiS family HF553_RS22430 PF05690 Thiazole biosynthesis protein ThiG HF553_RS22435 PF04055 Radical SAM superfamily HF553_RS22435 PF06968 Biotin and Thiamin Synthesis associated domain HF553_RS22455 PF00623 RNA polymerase Rpb1, domain 2 HF553_RS22455 PF04983 RNA polymerase Rpb1, domain 3 HF553_RS22455 PF05000 RNA polymerase Rpb1, domain 4 HF553_RS22455 PF04998 RNA polymerase Rpb1, domain 5 HF553_RS22455 PF04997 RNA polymerase Rpb1, domain 1 HF553_RS22460 PF04565 RNA polymerase Rpb2, domain 3 HF553_RS22460 PF04563 RNA polymerase beta subunit HF553_RS22460 PF04561 RNA polymerase Rpb2, domain 2 HF553_RS22460 PF10385 RNA polymerase beta subunit external 1 domain HF553_RS22460 PF00562 RNA polymerase Rpb2, domain 6 HF553_RS22460 PF04560 RNA polymerase Rpb2, domain 7 HF553_RS22465 PF00542 Ribosomal protein L7/L12 C-terminal domain HF553_RS22465 PF16320 Ribosomal protein L7/L12 dimerisation domain HF553_RS22470 PF00466 Ribosomal protein L10 HF553_RS22475 PF00687 Ribosomal protein L1p/L10e family HF553_RS22480 PF00298 Ribosomal protein L11, RNA binding domain HF553_RS22480 PF03946 Ribosomal protein L11, N-terminal domain HF553_RS22485 PF00467 KOW motif HF553_RS22485 PF02357 Transcription termination factor nusG HF553_RS22490 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HF553_RS22495 PF03143 Elongation factor Tu C-terminal domain HF553_RS22495 PF00009 Elongation factor Tu GTP binding domain HF553_RS22495 PF03144 Elongation factor Tu domain 2 HF553_RS22525 PF00485 Phosphoribulokinase / Uridine kinase family HF553_RS22530 PF02237 Biotin protein ligase C terminal domain HF553_RS22530 PF03099 Biotin/lipoate A/B protein ligase family HF553_RS22530 PF08279 HTH domain HF553_RS22535 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HF553_RS22535 PF01565 FAD binding domain HF553_RS22565 PF01177 Asp/Glu/Hydantoin racemase HF553_RS22570 PF07715 TonB-dependent Receptor Plug Domain HF553_RS22570 PF00593 TonB dependent receptor HF553_RS22575 PF05958 tRNA (Uracil-5-)-methyltransferase HF553_RS22580 PF07226 Protein of unknown function (DUF1422) HF553_RS22585 PF00440 Bacterial regulatory proteins, tetR family HF553_RS22590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HF553_RS22590 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF553_RS22595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS22595 PF03466 LysR substrate binding domain HF553_RS22600 PF00206 Lyase HF553_RS22600 PF14698 Argininosuccinate lyase C-terminal HF553_RS22605 PF00696 Amino acid kinase family HF553_RS22610 PF02774 Semialdehyde dehydrogenase, dimerisation domain HF553_RS22610 PF01118 Semialdehyde dehydrogenase, NAD binding domain HF553_RS22615 PF01546 Peptidase family M20/M25/M40 HF553_RS22615 PF07687 Peptidase dimerisation domain HF553_RS22625 PF00311 Phosphoenolpyruvate carboxylase HF553_RS22630 PF00884 Sulfatase HF553_RS22635 PF12833 Helix-turn-helix domain HF553_RS22640 PF00923 Transaldolase/Fructose-6-phosphate aldolase HF553_RS22645 PF00465 Iron-containing alcohol dehydrogenase HF553_RS22650 PF06940 Domain of unknown function (DUF1287) HF553_RS22655 PF00141 Peroxidase HF553_RS22660 PF02219 Methylenetetrahydrofolate reductase HF553_RS22665 PF00392 Bacterial regulatory proteins, gntR family HF553_RS22665 PF00155 Aminotransferase class I and II HF553_RS22670 PF01168 Alanine racemase, N-terminal domain HF553_RS22670 PF00842 Alanine racemase, C-terminal domain HF553_RS22675 PF00464 Serine hydroxymethyltransferase HF553_RS22680 PF00149 Calcineurin-like phosphoesterase HF553_RS22680 PF02872 5'-nucleotidase, C-terminal domain HF553_RS22680 PF17936 Bacterial Ig domain HF553_RS22695 PF05552 Conserved TM helix HF553_RS22695 PF00924 Mechanosensitive ion channel HF553_RS22700 PF03447 Homoserine dehydrogenase, NAD binding domain HF553_RS22700 PF00742 Homoserine dehydrogenase HF553_RS22700 PF00696 Amino acid kinase family HF553_RS22705 PF01053 Cys/Met metabolism PLP-dependent enzyme HF553_RS22710 PF01340 Met Apo-repressor, MetJ HF553_RS22715 PF05935 Arylsulfotransferase (ASST) HF553_RS22715 PF17425 Arylsulfotransferase Ig-like domain HF553_RS22725 PF01197 Ribosomal protein L31 HF553_RS22730 PF00270 DEAD/DEAH box helicase HF553_RS22730 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HF553_RS22730 PF17764 3′ DNA-binding domain (3′BD) HF553_RS22730 PF00271 Helicase conserved C-terminal domain HF553_RS22730 PF18074 Primosomal protein N C-terminal domain HF553_RS22735 PF00356 Bacterial regulatory proteins, lacI family HF553_RS22740 PF05036 Sporulation related domain HF553_RS22745 PF00227 Proteasome subunit HF553_RS22750 PF10431 C-terminal, D2-small domain, of ClpB protein HF553_RS22750 PF07724 AAA domain (Cdc48 subfamily) HF553_RS22750 PF00004 ATPase family associated with various cellular activities (AAA) HF553_RS22755 PF01040 UbiA prenyltransferase family HF553_RS22760 PF03737 Aldolase/RraA HF553_RS22765 PF06005 Cell division protein ZapB HF553_RS22770 PF00230 Major intrinsic protein HF553_RS22775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HF553_RS22775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HF553_RS22780 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HF553_RS22785 PF00970 Oxidoreductase FAD-binding domain HF553_RS22785 PF00175 Oxidoreductase NAD-binding domain HF553_RS22790 PF05656 Protein of unknown function (DUF805) HF553_RS22795 PF07305 Protein of unknown function (DUF1454) HF553_RS22800 PF00121 Triosephosphate isomerase HF553_RS22810 PF00392 Bacterial regulatory proteins, gntR family HF553_RS22810 PF00155 Aminotransferase class I and II HF553_RS22820 PF00294 pfkB family carbohydrate kinase HF553_RS22830 PF02611 CDP-diacylglycerol pyrophosphatase HF553_RS22840 PF00365 Phosphofructokinase HF553_RS22845 PF01545 Cation efflux family HF553_RS22845 PF16916 Dimerisation domain of Zinc Transporter HF553_RS22850 PF07813 LTXXQ motif family protein HF553_RS22855 PF00486 Transcriptional regulatory protein, C terminal HF553_RS22855 PF00072 Response regulator receiver domain HF553_RS22860 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS22860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS22860 PF00672 HAMP domain HF553_RS22860 PF16527 Two-component sensor protein CpxA, periplasmic domain HF553_RS22870 PF03475 3-alpha domain HF553_RS22870 PF03473 MOSC domain HF553_RS22875 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HF553_RS22875 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HF553_RS22880 PF03480 Bacterial extracellular solute-binding protein, family 7 HF553_RS22885 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HF553_RS22890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HF553_RS22895 PF06178 Oligogalacturonate-specific porin protein (KdgM) HF553_RS22900 PF06379 L-rhamnose-proton symport protein (RhaT) HF553_RS22905 PF12833 Helix-turn-helix domain HF553_RS22905 PF02311 AraC-like ligand binding domain HF553_RS22910 PF02311 AraC-like ligand binding domain HF553_RS22910 PF12833 Helix-turn-helix domain HF553_RS22915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HF553_RS22915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HF553_RS22920 PF06134 L-rhamnose isomerase (RhaA) HF553_RS22925 PF00596 Class II Aldolase and Adducin N-terminal domain HF553_RS22930 PF00465 Iron-containing alcohol dehydrogenase HF553_RS22935 PF05336 L-rhamnose mutarotase HF553_RS22945 PF03591 AzlC protein HF553_RS22955 PF12889 Protein of unknown function (DUF3829) HF553_RS22960 PF12889 Protein of unknown function (DUF3829) HF553_RS22965 PF02634 FdhD/NarQ family HF553_RS22975 PF09163 Formate dehydrogenase N, transmembrane HF553_RS22975 PF13247 4Fe-4S dicluster domain HF553_RS22980 PF01292 Prokaryotic cytochrome b561 HF553_RS22985 PF04216 Protein involved in formate dehydrogenase formation HF553_RS23000 PF07859 alpha/beta hydrolase fold HF553_RS23005 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system HF553_RS23010 PF01381 Helix-turn-helix HF553_RS23015 PF09500 Putative thioesterase (yiiD_Cterm) HF553_RS23015 PF00583 Acetyltransferase (GNAT) family HF553_RS23020 PF02580 D-Tyr-tRNA(Tyr) deacylase HF553_RS23025 PF03631 Virulence factor BrkB HF553_RS23030 PF13419 Haloacid dehalogenase-like hydrolase HF553_RS23035 PF08220 DeoR-like helix-turn-helix domain HF553_RS23035 PF00455 DeoR C terminal sensor domain HF553_RS23040 PF00294 pfkB family carbohydrate kinase HF553_RS23045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF553_RS23045 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF553_RS23050 PF01791 DeoC/LacD family aldolase HF553_RS23060 PF01263 Aldose 1-epimerase HF553_RS23065 PF01055 Glycosyl hydrolases family 31 HF553_RS23080 PF06178 Oligogalacturonate-specific porin protein (KdgM) HF553_RS23100 PF04055 Radical SAM superfamily HF553_RS23120 PF03951 Glutamine synthetase, beta-Grasp domain HF553_RS23120 PF00120 Glutamine synthetase, catalytic domain HF553_RS23125 PF00512 His Kinase A (phospho-acceptor) domain HF553_RS23125 PF00989 PAS fold HF553_RS23125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF553_RS23130 PF00072 Response regulator receiver domain HF553_RS23130 PF00158 Sigma-54 interaction domain HF553_RS23130 PF02954 Bacterial regulatory protein, Fis family HF553_RS23140 PF04055 Radical SAM superfamily HF553_RS23140 PF06969 HemN C-terminal domain HF553_RS23145 PF04220 Der GTPase activator (YihI) HF553_RS23155 PF01926 50S ribosome-binding GTPase HF553_RS23160 PF01612 3'-5' exonuclease HF553_RS23160 PF01367 5'-3' exonuclease, C-terminal SAM fold HF553_RS23160 PF00476 DNA polymerase family A HF553_RS23160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HF553_RS23165 PF01553 Acyltransferase HF553_RS23170 PF01323 DSBA-like thioredoxin domain HF553_RS23175 PF01636 Phosphotransferase enzyme family HF553_RS23180 PF06288 Protein of unknown function (DUF1040) HF553_RS23185 PF12804 MobA-like NTP transferase domain HF553_RS23190 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HF553_RS23225 PF12724 Flavodoxin domain HF553_RS23230 PF02386 Cation transport protein HF553_RS23235 PF09186 Domain of unknown function (DUF1949) HF553_RS23235 PF01205 Uncharacterized protein family UPF0029 HF553_RS23240 PF00557 Metallopeptidase family M24 HF553_RS23245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HF553_RS23245 PF00378 Enoyl-CoA hydratase/isomerase HF553_RS23245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HF553_RS23250 PF00108 Thiolase, N-terminal domain HF553_RS23250 PF02803 Thiolase, C-terminal domain HF553_RS23255 PF17425 Arylsulfotransferase Ig-like domain HF553_RS23255 PF05935 Arylsulfotransferase (ASST) HF553_RS23260 PF00175 Oxidoreductase NAD-binding domain HF553_RS23260 PF00970 Oxidoreductase FAD-binding domain HF553_RS23265 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HF553_RS23270 PF02357 Transcription termination factor nusG HF553_RS23275 PF01026 TatD related DNase HF553_RS23280 PF00902 Sec-independent protein translocase protein (TatC) HF553_RS23290 PF02416 mttA/Hcf106 family HF553_RS23295 PF03109 ABC1 family HF553_RS23300 PF02036 SCP-2 sterol transfer family HF553_RS23305 PF01209 ubiE/COQ5 methyltransferase family HF553_RS23310 PF02646 RmuC family HF553_RS23315 PF01048 Phosphorylase superfamily HF553_RS23320 PF01738 Dienelactone hydrolase family HF553_RS23325 PF04055 Radical SAM superfamily HF553_RS23325 PF13186 Iron-sulfur cluster-binding domain HF553_RS23330 PF08267 Cobalamin-independent synthase, N-terminal domain HF553_RS23330 PF01717 Cobalamin-independent synthase, Catalytic domain HF553_RS23335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS23335 PF03466 LysR substrate binding domain HF553_RS23340 PF00892 EamA-like transporter family HF553_RS23350 PF12146 Serine aminopeptidase, S33 HF553_RS23355 PF01810 LysE type translocator HF553_RS23360 PF01810 LysE type translocator HF553_RS23365 PF00270 DEAD/DEAH box helicase HF553_RS23365 PF09382 RQC domain HF553_RS23365 PF16124 RecQ zinc-binding HF553_RS23365 PF00570 HRDC domain HF553_RS23365 PF00271 Helicase conserved C-terminal domain HF553_RS23370 PF02253 Phospholipase A1 HF553_RS23375 PF03061 Thioesterase superfamily HF553_RS23380 PF00892 EamA-like transporter family HF553_RS23395 PF01544 CorA-like Mg2+ transporter protein HF553_RS23400 PF00580 UvrD/REP helicase N-terminal domain HF553_RS23400 PF13361 UvrD-like helicase C-terminal domain HF553_RS23405 PF13419 Haloacid dehalogenase-like hydrolase HF553_RS23410 PF02899 Phage integrase, N-terminal SAM-like domain HF553_RS23410 PF00589 Phage integrase family HF553_RS23415 PF04340 Protein of unknown function, DUF484 HF553_RS23420 PF01678 Diaminopimelate epimerase HF553_RS23425 PF13627 Prokaryotic lipoprotein-attachment site HF553_RS23445 PF01491 Frataxin-like domain HF553_RS23450 PF12633 Adenylate cyclase NT domain HF553_RS23450 PF01295 Adenylate cyclase, class-I HF553_RS23455 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HF553_RS23455 PF03900 Porphobilinogen deaminase, C-terminal domain HF553_RS23460 PF02602 Uroporphyrinogen-III synthase HemD HF553_RS23465 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HF553_RS23470 PF07219 HemY protein N-terminus HF553_RS23470 PF07719 Tetratricopeptide repeat HF553_RS23475 PF01797 Transposase IS200 like HF553_RS23500 PF00324 Amino acid permease HF553_RS23505 PF03808 Glycosyl transferase WecB/TagA/CpsF family HF553_RS23510 PF06899 WzyE protein, O-antigen assembly polymerase HF553_RS23515 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 HF553_RS23520 PF01943 Polysaccharide biosynthesis protein HF553_RS23525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HF553_RS23535 PF00483 Nucleotidyl transferase HF553_RS23535 PF00483 Nucleotidyl transferase HF553_RS23540 PF16363 GDP-mannose 4,6 dehydratase HF553_RS23545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HF553_RS23545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HF553_RS23545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HF553_RS23550 PF02350 UDP-N-acetylglucosamine 2-epimerase HF553_RS23555 PF02706 Chain length determinant protein HF553_RS23560 PF00953 Glycosyl transferase family 4 HF553_RS23565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HF553_RS23565 PF07498 Rho termination factor, N-terminal domain HF553_RS23565 PF07497 Rho termination factor, RNA-binding domain HF553_RS23575 PF00085 Thioredoxin HF553_RS23580 PF00270 DEAD/DEAH box helicase HF553_RS23580 PF00271 Helicase conserved C-terminal domain HF553_RS23585 PF02541 Ppx/GppA phosphatase family HF553_RS23590 PF00580 UvrD/REP helicase N-terminal domain HF553_RS23590 PF13361 UvrD-like helicase C-terminal domain HF553_RS23605 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HF553_RS23605 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HF553_RS23610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS23610 PF03466 LysR substrate binding domain HF553_RS23630 PF00291 Pyridoxal-phosphate dependent enzyme HF553_RS23630 PF00585 C-terminal regulatory domain of Threonine dehydratase HF553_RS23635 PF00920 Dehydratase family HF553_RS23640 PF01063 Amino-transferase class IV HF553_RS23650 PF00205 Thiamine pyrophosphate enzyme, central domain HF553_RS23650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF553_RS23650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF553_RS23655 PF08046 IlvGEDA operon leader peptide HF553_RS23660 PF13335 Magnesium chelatase, subunit ChlI C-terminal HF553_RS23660 PF01078 Magnesium chelatase, subunit ChlI HF553_RS23665 PF04219 Protein of unknown function, DUF HF553_RS23670 PF03466 LysR substrate binding domain HF553_RS23670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS23705 PF07729 FCD domain HF553_RS23705 PF00392 Bacterial regulatory proteins, gntR family HF553_RS23710 PF07690 Major Facilitator Superfamily HF553_RS23715 PF00356 Bacterial regulatory proteins, lacI family HF553_RS23720 PF00294 pfkB family carbohydrate kinase HF553_RS23725 PF13407 Periplasmic binding protein domain HF553_RS23730 PF02653 Branched-chain amino acid transport system / permease component HF553_RS23735 PF00005 ABC transporter HF553_RS23740 PF05025 RbsD / FucU transport protein family HF553_RS23745 PF02705 K+ potassium transporter HF553_RS23750 PF07728 AAA domain (dynein-related subfamily) HF553_RS23750 PF12592 Protein of unknown function (DUF3763) HF553_RS23750 PF17868 AAA lid domain HF553_RS23755 PF05762 VWA domain containing CoxE-like protein HF553_RS23760 PF03590 Aspartate-ammonia ligase HF553_RS23765 PF01037 Lrp/AsnC ligand binding domain HF553_RS23770 PF00258 Flavodoxin HF553_RS23775 PF01134 Glucose inhibited division protein A HF553_RS23775 PF13932 GidA associated domain HF553_RS23780 PF02527 rRNA small subunit methyltransferase G HF553_RS23785 PF03899 ATP synthase I chain HF553_RS23790 PF00119 ATP synthase A chain HF553_RS23795 PF00137 ATP synthase subunit C HF553_RS23800 PF00430 ATP synthase B/B' CF(0) HF553_RS23805 PF00213 ATP synthase delta (OSCP) subunit HF553_RS23810 PF02874 ATP synthase alpha/beta family, beta-barrel domain HF553_RS23810 PF00306 ATP synthase alpha/beta chain, C terminal domain HF553_RS23810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HF553_RS23815 PF00231 ATP synthase HF553_RS23820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HF553_RS23820 PF02874 ATP synthase alpha/beta family, beta-barrel domain HF553_RS23825 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HF553_RS23825 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HF553_RS23835 PF00132 Bacterial transferase hexapeptide (six repeats) HF553_RS23835 PF12804 MobA-like NTP transferase domain HF553_RS23840 PF01380 SIS domain HF553_RS23845 PF08722 TnsA endonuclease N terminal HF553_RS23845 PF08721 TnsA endonuclease C terminal HF553_RS23850 PF00665 Integrase core domain HF553_RS23855 PF13401 AAA domain HF553_RS23855 PF11426 Tn7 transposition regulator TnsC HF553_RS23860 PF15978 Tn7-like transposition protein D HF553_RS23860 PF06527 TniQ HF553_RS23865 PF18623 TnsE C-terminal domain HF553_RS23895 PF00583 Acetyltransferase (GNAT) family HF553_RS23900 PF00186 Dihydrofolate reductase HF553_RS23905 PF00589 Phage integrase family HF553_RS23905 PF13495 Phage integrase, N-terminal SAM-like domain HF553_RS23910 PF13495 Phage integrase, N-terminal SAM-like domain HF553_RS23910 PF00589 Phage integrase family HF553_RS23920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF553_RS23920 PF12793 Sugar transport-related sRNA regulator N-term HF553_RS23925 PF08501 Shikimate dehydrogenase substrate binding domain HF553_RS23930 PF02378 Phosphotransferase system, EIIC HF553_RS23930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HF553_RS23935 PF12849 PBP superfamily domain HF553_RS23940 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS23945 PF00528 Binding-protein-dependent transport system inner membrane component HF553_RS23950 PF00005 ABC transporter HF553_RS23955 PF01895 PhoU domain HF553_RS23960 PF13419 Haloacid dehalogenase-like hydrolase HF553_RS23965 PF00860 Permease family HF553_RS23970 PF03358 NADPH-dependent FMN reductase HF553_RS23980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF553_RS23980 PF03466 LysR substrate binding domain HF553_RS23985 PF07690 Major Facilitator Superfamily HF553_RS23990 PF01926 50S ribosome-binding GTPase HF553_RS23990 PF10396 GTP-binding protein TrmE N-terminus HF553_RS23990 PF12631 MnmE helical domain HF553_RS23995 PF02096 60Kd inner membrane protein HF553_RS23995 PF14849 YidC periplasmic domain HF553_RS24000 PF01809 Putative membrane protein insertion efficiency factor HF553_RS24005 PF00825 Ribonuclease P HF553_RS24010 PF00468 Ribosomal protein L34