        recF NONE
        gyrB    6178 ..    6213 +   -14  -2.77999   ATATTTAACCTGCCT    TAAT-CCCCGGCCCGCC GCT GGCTGGCCGGGGCATCA    TGATGTTCATCCATA  86 33
        yidA   10840 ..   10856 +  -9.4  -5.82281   ATACGCGCTTAACGA              CCCGCA CTTGC TGCGGG              TTTTTTTATGTCTTT 100 62
        dgoR NONE
HF553_RS00050 NONE
HF553_RS00055 NONE
        dgoD   14409 ..   14419 +  -2.4  -2.82327   ACAAACGTCGCCCTC                 CGGG CAA CCCA                 ATTTAAATATAAAAA  40 60
HF553_RS00065   15938 ..   15970 +  -6.1  -5.04601   CCCGACAGGCTTCGG      TTGCCTGCGTCATCC CCA GGCTGGCGCAGCCGC      TTTTTAATTTATGCG  84 167
        torT   20072 ..   20085 +  -3.8  -2.83403   CGCCCATCTCCAGCC               CGAC GATGCG GTCG                ATTTGGTCGCAACGC  43 420
        torC NONE
        torA NONE
        torD   24919 ..   24929 +  -3.2  -4.39414   TGATACCAATCAATA                 TCCA CTA TGGG                 TTTGTATTTAGTATT  62 121
HF553_RS00100 NONE
        ccmA NONE
        ccmB NONE
HF553_RS00115   28474 ..   28486 +  -6.2  -2.50493   ACTGAAAAGGGGGCA                CCGG TGAGT CCGG                CATTTTCATCGTGGA  53 19
        ccmD NONE
        ccmE NONE
HF553_RS00130 NONE
        dsbE NONE
HF553_RS00140   32779 ..   32791 +  -7.7  -3.21593   CGTGTGCAGTATGAT                GACGA GCA TCGTC                TCTTATCAGGACATC  64 117
HF553_RS00145   34206 ..   34217 +  -2.2  -4.11235   AGGATGGCCAACGAT                TTGG TGCC CCAG                 TTTGTCTCATCGTTA  56 196
        ibpA   35101 ..   35117 + -11.5  -2.80113   TAACTGATTCCGTCG              GGTCGCG TTG CGCGGCC              TGTCATCCCATGCTC  77 34
        ibpB   35646 ..   35667 + -17.3  -5.24129   TAAGCTCCTTGCCTT           GCCCCGCCA GAGA TGGCGGGGC            TTTTTTGTGCCACGA 100 41
HF553_RS00165   37480 ..   37493 +  -9.5  -2.66274   TTGGGGAATGGGTTA               GCGCC TGAT GGCGC                GTTGCTTATCCGGCC  68 25
HF553_RS00170 NONE
HF553_RS00175 NONE
HF553_RS00180   39169 ..   39209 + -11.9  -3.35046   TACAGGCCTGATAAG C-GTAGCGCCATCAGGCG ATGGCG TGCCGGATGGCGCTGCCG  TCTTTCCGGCACTGA  85 44
        dsdC NONE
HF553_RS00200   44697 ..   44714 +  -5.5  -4.42386   GGTAACAGTTAAATG             CGCCGTT ACCA AACAGCG              TTTTATAGCTGGCGA  70 515
        ivbL   47322 ..   47346 + -10.7  -5.63517   CACACGATTCCAAAA         CCCCGC-CGG CGCAAA CCGGGCGGGG          TTTTTTGTTTAAGAC 100 52
        ilvB NONE
        ilvN   49627 ..   49657 +  -5.4  -2.73159   CAGCTCACGCCAAAA       TGTTCATGTACGCC GCT GGCGGAAATAAACA       CTTTGCGCGGATTGA  47 268
        rbsK NONE
        fucP NONE
HF553_RS00255   53813 ..   53833 +  -6.2  -4.58395   GCTTGAACACCCAGG            CACTTATC GTTAA GGTAAGTG            TTTTTGCCGGATGGC  76 50
        uhpA NONE
        uhpB   56012 ..   56024 +  -5.5  -3.27525   CGCGGGTGAGCGTCT                CGTTG CCC CAGCG                TTACGTTTAAGGAAG  54 3
HF553_RS00270   57427 ..   57448 +  -5.1  -2.52138   AAATTTTCCCGGTTT           TGCCTG-GAC GCT GTCGCAGGCC           CCTTTTCCTGTGGAT  48 80
        uhpT   58930 ..   58948 + -13.1  -5.31456   ATTTGGTAACGTTTT             GCCCGGC TTAAC GCCGGGC             TTTTTTATGCCTTGC 100 49
HF553_RS00280   59752 ..   59779 + -12.9  -2.94356   CGACTTATAGCTCAT        CATTTCCGTGA CATATA TCACGGAAATG         TGATCTTGTTTTGAA  86 226
HF553_RS00285 NONE
HF553_RS00290 NONE
HF553_RS00295   61409 ..   61421 +  -3.3   -2.8552   TAGTTTCAATCCTTA                AAGGC CAA GCCTG                ATTTCATAAATAAAA  44 12
HF553_RS00300 NONE
HF553_RS00305 NONE
HF553_RS00310 NONE
HF553_RS00315   65911 ..   65931 +  -9.1  -4.35327   CGCGCTATGAATCGC            TTCAAAGGC AGG GCTTTTGAA            TTTAGTTTTTGCTGA  84 401
        nepI   67789 ..   67807 +    -3  -5.42259   TTATGCTCTGCGGTG             GCGGCAAA CCA TTCTCCGC             TTTTTTTCACCGTGC  84 113
        dagR   72560 ..   72573 +  -8.1  -3.29142   ACTGGCGGGGCTTCG               GGCCT CGCC AGGCC                TATCTTCTTCCTCGC  65 48
HF553_RS00350 NONE
HF553_RS00355 NONE
HF553_RS00360 NONE
HF553_RS00365 NONE
        dgaE NONE
HF553_RS00375   77410 ..   77431 +  -6.5  -3.39521   AGCCGTCAGTGATTC           CCTTTCGAG CCTC CTCGCAGGG            TTAAATTTTCCTGAA  59 163
HF553_RS00380   78747 ..   78757 +  -6.8  -3.62054   CAGGCTGCCGCTCAC                 CGCA AAG TGCG                 TTCCTTCTTTAGCGT  62 335
HF553_RS00390 NONE
        mgtA NONE
        mgtR   83800 ..   83812 +  -5.5  -4.33274   TAGTTGTTCTTTTTA                TGGCG GGG CGCTA                TTTTCATGGTATCCC  70 179
HF553_RS00405   84512 ..   84532 + -14.1  -3.93262   AAATGGCAAGTAAAA            TAGCCCCAT TAA ATGGGGCTA            TTTAGTCTCTTCAGG 100 211
HF553_RS00415 NONE
HF553_RS00420 NONE
HF553_RS00425   87410 ..   87428 + -14.6  -3.27902   CGTTTCCGGGTAAAA             GCCGCTGA AGA TCAGCGGC             TCTGTTGTTACCTGA 100 85
HF553_RS00465   95191 ..   95204 +  -3.1  -3.19859   GTTAAGTCCCGCCCG               CGTTA GTCC TGACG                TACTTTTATCCCTTC  46 126
HF553_RS00565  115218 ..  115238 + -10.5  -2.74461   TTTACGACATGGCTA            TTCCGTATG AAC CATACGGAG            ATTTAACCATACATG  71 119
HF553_RS00570 NONE
HF553_RS00575  116338 ..  116362 +  -7.1  -4.63218   TGCCAGACACGCCCC          TGCCGGATC CGGATGT GGTCCGGCG          TTTTGTTCCGCGGAC  82 61
HF553_RS00585 NONE
HF553_RS00590  120606 ..  120616 +  -6.8  -2.60798   CCCGTCAGATCAGCG                 CCCT GTG AGGG                 GTTACTCGTTTCTGG  55 118
HF553_RS00595 NONE
HF553_RS00600 NONE
HF553_RS00605 NONE
HF553_RS00610  128047 ..  128080 + -11.1  -2.67803   TCGCCGAGTATTTTG     CTGTTGGTACCCTCA ATGA TGAGGGTACCAAAAC      TCGCTTTCATCCAAA  74 95
HF553_RS00635 NONE
        yicI  136247 ..  136262 +    -6  -3.30124   CTGAATCGCCGGATG              GCGCTG TGAG CTGCGC               TTATCCAGCCTACAA  59 43
        gltS  141285 ..  141306 +  -5.8  -3.85698   CCTGTAAACGCTTCT           GCGCCGTT TTCGAC AACGGCGA            TTTATAGAGCAGCAC  63 324
        ligB  149107 ..  149121 +  -5.6  -2.87211   GATAATTGGCCCTTC               GCCCAT ATC AAGGGC               TATCTGAGCGCCAAT  49 304
HF553_RS00700  151740 ..  151758 +  -2.4  -5.45652   GCATCATGAAGTCCA            GACGGCG ACCTAC CGCC-TC             TTTTTTCTTCAGAAT  85 215
         rph  153312 ..  153329 + -11.3  -5.96219   GAAAATTGATTTTAA             GGCGACT GAAA AGTCGCC              TTTTTTTTGTCCGTA 100 32
        pyrE  154424 ..  154451 +    -4  -5.69023   ACCCAGAATCAGCAA        CACAATCAGGCG CAAA CGCGTGCTGGTG         TTTTTTTCATCTTTT  91 424
        radC  157317 ..  157330 +  -6.7   -4.2074   TAAGATTCTTTGCGC               GATCC ATCG GGATC                TTTGTCTGTTCGGGA  72 38
        rpmB NONE
        rpmG  157970 ..  157985 +  -8.2  -5.86976   TTGATGTAACAAAAA              CCTCGC TTCG GCGGGG               TTTTTTGTTTTCTGG 100 49
        mutM  159205 ..  159231 +  -3.6  -4.15222   TTTTTGCGCCAGCGC         CACACGTTCGTC CAG GGTGAACATGGG         TTTCTTGCCGGGGCT  60 377
        rfaQ NONE
HF553_RS00770 NONE
        rfaP  164032 ..  164042 +  -2.6  -4.84918   CAATAAGAAAAAATC                 TTTA ATA TAAA                 TTTTGTATTTATAAA  68 21
HF553_RS00780 NONE
        waaB NONE
        waaO NONE
        rfaJ NONE
        rfaY  169046 ..  169060 +  -2.9  -3.34369   TGAGATGTAATATTA               GTTAT TGAAT ATAAC               ATTTATTTATAGGTT  46 121
        waaZ  169931 ..  169949 +  -5.3  -5.01422   GATAAATCATTATTT            TGCGTTGC TTCG GCA-CGCA             TTTCTTTTTGTATAA  77 47
HF553_RS00810  171176 ..  171205 + -13.7  -5.82281   CCTGATGATGGAAAA       CGCGCTGATAC CGTAATAA GTATCAGCGCG        TTTTTTTATCTATTT 100 47
         kbl NONE
         tdh  177888 ..  177908 +    -9   -5.4505   CGTTTCATCGTAAAA            GGTTGGTG TCATT CGCCAACC            TTTTTTGTTAGGGAA 100 80
HF553_RS00845  179281 ..  179293 +  -3.3  -5.09426   AGCGCGTAGCGTAGA                CCGGT TGC AGCGG                TTTTTTCGGCTTGCA  76 146
HF553_RS00865  183618 ..  183636 +  -3.9  -3.13504   AATCTGCCTCTGGTG            CGCGGTAA GTGA TTACC-CG             TCGTTTTCATGACGC  48 14
        grxC  183942 ..  183956 +  -3.5  -3.14878   CGCTGGATGCGCGTG               GTGGA CTGGA TCCGC               TGTTGCGTTAAGGCG  46 0
        secB NONE
        gpsA  185521 ..  185550 + -10.1  -4.39426   AACTGTTTGCATAAA       CGACCCAACCCG CACAGAA CGGGTTGG-TCG       TTTTCTGCCCGTCTG  87 49
        cysE  186854 ..  186877 +    -3   -3.6502   AACAGGCAGTTTCCG          CGCGACGGTA AGGC TATAGCCGCG           TTTGAGTAGCCAGTC  51 483
HF553_RS00900  190784 ..  190798 +  -4.2   -3.4072   TGATAGTCCAGCCCT               GCGC GGCGTAA GCGC               TTATCATCCCAGGTA  51 427
HF553_RS00940  201738 ..  201748 +  -4.6  -3.34398   CCACAGCGTATTTCA                 CGGC ATA GTCG                 TCTTTGCGAAACACC  51 409
HF553_RS00960 NONE
        selA NONE
        selB  209589 ..  209609 +  -4.7  -5.69262   TAAATAACAAATGAA            GCAATACAA TTA TTGCGTTGC            TTTTTATTTTTCTGG 100 52
        aldB  212815 ..  212829 +  -4.2  -4.00526   ACAACGCCTGATGCT               GCGC ATCTGGG GCGC               TTTGCTTCTCGCCTT  60 442
HF553_RS00990  215860 ..  215876 +  -3.5  -3.14051   AGCCGCCATCCGACA              CAGGCTG TGA CTGCCGG              TATTACTGCCCGTAA  46 167
        yiaJ  225944 ..  225965 +  -4.5  -4.02534   AGACAGCTCGCCAGG           TTTTATCAG GCAT CTGACAAAA            TTTGTCCGTTTGCGT  61 40
HF553_RS01050  226586 ..  226596 +    -4  -4.56775   GGCGCGTTCTATCTC                 TTCT GCC AGAA                 TTTTTACGCCCGCCT  69 92
HF553_RS01065  231460 ..  231477 +  -5.5  -3.76492   TGAAATCCCAACCGC             GTCCAGC ACCT GCTCGAC              TTTAATGCCCTTACA  58 338
        xylA  234120 ..  234147 +  -9.8  -2.78679   CCTGTAGTCGTGATT        AGCCCGGTAAGCG TAG CGCT-GCCGGGCG        CTTTCAGTAAAGGAA  69 74
        xylB  235633 ..  235658 + -12.7  -3.61922   TGTCATAAGTCAGAA         TGCCTTTCAGT TTTG GCTGAAAGGCA          TTTCCCGTAAATATT  95 33
HF553_RS01085  236151 ..  236168 +  -9.9  -3.61609   TACAGTGATGATGAA             TGATGGC CGGA GCCATCA              TTGTCGTTTAGCTAA  77 23
HF553_RS01095  237663 ..  237679 +  -5.1  -3.10597   CCTGGTGAGGTGTGA              TGCCG CGAAATC CGGCA              ATTTTCGCTAAACAA  51 49
        glyQ NONE
        glyS  240792 ..  240807 +  -6.8   -5.9218   TTAATTAAACAAAAA              CCTGCT TTCG GGCAGG               TTTTTTTATTGTCTA 100 49
        tnpA  241494 ..  241526 + -11.3  -4.63527   CCTTACAGGCGCATC      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTTAACGTAATGG 100 100
HF553_RS01130  244495 ..  244524 +  -6.4   -3.9941   ATCGACCACCGGGCC       GCGTCCGGCATT AATAAA AATGGCGGACGA        TTTCATTCTGGCAAA  65 339
HF553_RS01145  248789 ..  248812 +  -2.5  -3.81741   CGCCCCGACAAAACG         GGCTTC--CAG TACG CTGACGAAGCC          TTTCAGTTGTCCATT  52 231
HF553_RS01160  250527 ..  250550 +  -6.8  -3.91144   TTTGCGCTTCCTGTG          GTCTACTTAGC CGC GCTG-GTAGAC          TTTCTCACATCTGCG  68 140
        eptB NONE
HF553_RS01170  252512 ..  252530 + -14.6  -5.76633   GACCAAATTCAGAAA             CCCTGCTC AAC GAGCAGGG             TTTTTTTGTATCTGA 100 36
HF553_RS01175  252681 ..  252699 + -14.6  -5.76633   GACCAAATTCAGAAA             CCCTGCTC AAT GAGCAGGG             TTTTTTTGTCTATGG 100 36
HF553_RS01180  253389 ..  253409 + -12.5   -3.8147   AGGCGCATCTGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTGTATCTG 100 106
HF553_RS01185  253718 ..  253735 +  -6.9  -4.19678   CGCGGATACCGTCAT             AGCGGGT AACC ACCCGCA              TTTGTTCAGGTATGG  70 192
HF553_RS01195  255827 ..  255852 + -11.1  -5.69023   TGGTTGAAATAATAC         AGACCGCCAGC CCGC GCTGGCGGTTA          TTTTTTTGATGTTTT 100 29
HF553_RS01200  257221 ..  257241 + -12.6  -4.00411   GTTTTTGTGATCGCG            GTAGGCCG CACGA CGGCCTAC            TTATTTACAATTTTG 100 40
HF553_RS01205  259411 ..  259434 +  -2.2  -3.86897   GTGTAGGCCGGATAA          GCGCAGCGCC ATCC GGCGTAATGC           TTTATCCGCGATGCA  53 67
        dppB NONE
        dppC NONE
        dppD NONE
        dppF  263480 ..  263491 +  -7.2  -3.30124   CGTTTTATGCCGGAT                GGCG GCTG CGCC                 TTATCAAGCCTACAC  63 44
HF553_RS01240  265651 ..  265690 + -18.6  -3.73775   AATGGCAACATGCGC  CCGAACCAGGCCGCAGGG GAAA CCTTGCGGCCTTTTTCGG   TTTACTGCGGGTAAG 100 66
HF553_RS01260  269568 ..  269581 +  -2.3  -2.58544   CACATTCATTAAGGA               AGCCA TGAA TGGCG                ATTCTGGGACTGCAG  39 18
        bcsQ  270306 ..  270348 +  -5.3  -2.57463   ATGCGGGTGACAAAA CGTCCGCCGGGAGCCTGCG ATGAG CGCCCTTTCCCGGTGGCTG CTTATCCCGCCGGTT  48 3
        bcsA NONE
        bcsB NONE
        bcsZ NONE
        bcsC  279949 ..  279962 +  -3.7  -2.91199   GGCCTGAGAAGCGCA               GCGCC ATCA GACGC                TATCATTAACCGTTA  46 77
        hmsP NONE
        dctA  283536 ..  283561 + -12.6  -3.37259   ATCTCGCCACTTATG         CCCGTAGTCC CTTCCA GGACTGCGGG          TGTTTGCGCATAATT  90 40
HF553_RS01300  285433 ..  285446 +  -3.1  -4.32857   GAGTCGCCTGCGGCA               GTGGT GTCT ATCAC                TTTCTCTTTCGGCAG  62 230
        pdeH  287209 ..  287254 +  -2.5  -3.30658   TTCTGACCCTGTAAC GCCAGACTGTTCC-CGTAATAC GTG GTATTACGAGGCGCGGTCATCC TCCTTTTTCGTCTGG  46 27
HF553_RS01315  289387 ..  289414 + -11.2  -3.02144   CAGTAATGTGAAACG        TAGCGCCGGATG ACAC CATCCGGCGCCC         TATTACAACGCCTGA  79 35
HF553_RS01335  294614 ..  294634 +  -5.3  -3.72695   ATCGCGATACTTTTC            CAGCGACAG ACC CTGCCACTG            TTTAATAAACGCGAT  58 316
HF553_RS01345  296743 ..  296767 +  -7.1  -2.79183   ACCGTTTTTAACCAG          TTATGGGCGAT TTC ATCGCCCAGCA          TATCGTCGCCATACC  52 213
HF553_RS01355  299297 ..  299321 + -11.5  -6.02546   GAAGAGCAGGCTGAA          TCGGGATCC AGATCGC GGATCCCGA          TTTTTTTTGGTTTCC 100 59
HF553_RS01360 NONE
HF553_RS01365 NONE
HF553_RS01370 NONE
HF553_RS01375  303809 ..  303844 +  -8.9  -3.03441   GTATTAATCATGAAG    GCCTGTGCGCCCACC CTCGAA GATGGGCGCACAAGA     TATTAACGCATGGTC  68 34
HF553_RS01390  307634 ..  307665 + -10.3  -3.01712   AACGCGCTGACGTTG      TCA-CCCGGCTTAT AAAAC GTAAGCCGGGATGA      TGTTAAAGGGGCGGC  73 31
        prlC  309848 ..  309870 +    -2  -3.18264   ATTACGGGATTAAAG           GCTGATTT TACGTGC AAATCTGC           TTAATGGATGAAACG  44 21
        rsmJ  310618 ..  310654 +  -4.4   -2.6924   CCTCTGACGGAGTAA   CGGATTGCCCGATG-GCG CTA CGCTTATCGGGCC-TACG   ATTCTCAATTATTTG  47 26
        uspB  313673 ..  313694 + -11.5  -2.75992   CACTGAATAAAAAAA           GCGGGCCAG TTTC CTGACCCGC            TCGTATTAGATAAGC  77 35
HF553_RS01425  316942 ..  316965 +  -5.8  -2.91395   TCCCGAATGGAAACC          CCCGCTGAGC GCAC GCCCGGCGGA           CTTTGTGACACGCAT  51 260
HF553_RS01430 NONE
        rbbA NONE
HF553_RS01440  322020 ..  322043 + -10.2  -3.50555   GCCGGGCAAGCGAAG          CGCCCCCG-GC AAA GCGCTGGGGCG          TTAGTCTTCTTTCGG  77 103
HF553_RS01460  326026 ..  326048 +  -8.3   -4.6391   GATGCCTGGCTTTCC           GCGGCGGCG CTTTC TGCCGACGC           TTTTGTATCATTGTT  87 486
        tusA  327453 ..  327489 +  -3.6   -4.2828   CTGATCTTCCAGCGC   CGCCGCCGCTGCT-GCGG ATT CCTCTACCAGCGA-GGCG   TTTTGCTGCGTCACG  64 199
HF553_RS01495  332943 ..  332956 +  -3.7   -4.1196   CCCAGTTCGCCGGAA               CGGGC GGCA GACCG                TTTTCCACCTCGCTT  60 404
        ftsY NONE
        ftsE NONE
        ftsX  336803 ..  336837 +  -6.4  -3.96093   CAATGGGCTTCCGTT    CGCAGGGAAAGAGTC CCCGTT GTCTCT-TCCCCGCG     TTTCATCTTCATGTC  66 67
        rpoH  337883 ..  337904 + -10.9  -5.49579   CGAATTGCCAATGAA           CCCTCGAAT GTGA ATTCGGGGG            TTTTGTTTTTTGTAG 100 47
        livJ  339449 ..  339475 +  -8.7  -4.66535   TCTCCCGGCATGTAG        GCCGGATAAGCG TCAG CGCC-ATCCGGC         TTTCTTTTAGCGCTT  89 188
        livK  341419 ..  341437 + -13.1  -2.73159   AGATAAGTTATCCCA             CCGCCCG CACGC CGGGCGG             GTTTAAAAAGGTTAC  85 48
        livH NONE
        livM  343650 ..  343663 +  -3.1  -2.78867   GGCGAAAGGAGAGCA               GGCATG AGT CA-GCC               ATTATTAGCGGTTAA  43 19
        livG NONE
        livF  345114 ..  345142 +    -6  -3.57462   GAACGAAGCGGTGCG       CAGCGCCT-ATCT GGGC GGATAAGGCGCAG        TTTACAGCTGCCATC  62 4
HF553_RS01570  345695 ..  345721 +  -2.4  -5.04175   TCTCTGTCGCCTTAC         TATCTTTTTTTT GTA ATAAAAAAGTTA         TTTTTCTGTCATTCG  71 143
        ugpB  347152 ..  347188 + -13.1  -2.71011   GCCTGATGGCGCTGC    GCTTATCAGGCCTACAG CGT TTGTAGGCCGGATAAGG    TGCTTGCACCGCCAT  85 51
        ugpA NONE
        ugpE  349086 ..  349103 +  -4.8  -3.90762   GCGATTTCGGCACGC             GTCCCA AAGGGC TGGGGC              TATTTTTGCCCAGTG  61 151
HF553_RS01590 NONE
        ugpQ  351040 ..  351062 +  -4.8  -4.08394   TTTCAGTTTTAAGGG           CCGTCAGTTT TAA GGGCTGATGG           TTTTCAGCGGGATGT  63 29
         ggt  353347 ..  353367 + -14.7  -3.39028   GATTTTTAATACCAG            GCCCGGTGT CAG GCACCGGGC            TATTTGCAGATTATG 100 39
HF553_RS01635 NONE
HF553_RS01640  360522 ..  360554 +  -4.8  -4.40993   TGTAACCTTTTGTAG     GCCGGAT-AAGACGC GAAA GCGTTGCCATCCGGC      TTTTCATCGTTTGTC  68 46
        gntR  361752 ..  361763 +  -3.6  -3.53444   TTTGCAACTTGTAGA                GTGG GGGC CCGC                 TTTGAGCACGACTAA  50 151
        gntK NONE
        gntU  363700 ..  363725 +  -6.2  -5.80364   TATCGACACCGTAAG        CCGGGTAAGGCG TAAT CGC-T-ACCCGG         TTTTTTTATTGAGGT 100 90
         asd  365293 ..  365308 +  -6.1  -5.82316   TCAGATTGATATGTA              GGGTG CATCGT CACCC               TTTTTTTTGCGTAAT 100 153
        glgB NONE
        glgX NONE
        glgC NONE
        glgA NONE
        glgP  374931 ..  374948 + -14.1  -5.32882   TTTAACGCTTGAGAA             CGGGGCC AAAC GGCCCCG              TTTTTTATCGTGGTA 100 44
HF553_RS01695  375860 ..  375876 + -10.8  -3.80461   AAATAAAAAGACACA              GCGGGC AAGAA GCCCGC              TTTCGTCATAGCTTA  85 40
HF553_RS01715  381352 ..  381385 +  -5.9  -2.84103   GCCTGTAAATAAAAA     ACGGCAGCCGGAACT TTCA ACTTCTGTCTGCCGC      TATCGTGAATGTTTT  51 46
HF553_RS01720 NONE
HF553_RS01725  383571 ..  383581 +  -2.4  -4.63218   AAAAGGGCGGTATAA                 ACCG CCC CGGA                 TTTTATTACGACGCC  64 56
        glpE NONE
        glpG  386531 ..  386552 +  -5.9  -4.56597   AACGAACGTGAGGCG           TATC-CGGCC TGT GGTCGAGATA           TTTTTCCAGGCCGGG  72 30
HF553_RS01745  387672 ..  387686 +  -7.8  -2.70932   CTGGTGCGAATAAGC               TCCGGG ACA TCCGGA               TGGTTAAGCAGGCGC  55 319
        malP NONE
        malQ  395237 ..  395254 + -14.1  -3.99324   AGAAGAAGTAATAAA             GCCGGGG ATTT CCCCGGC              TTTATGATGGTGAGA 100 30
        bioH  399444 ..  399473 +  -7.1  -2.90075   GGCGGATAAACGTAT       TGAAGCGCGC-GGC GTC GCCAGTGTGCATCA       TGTAATTAAACAAAC  53 300
        ompR  407446 ..  407493 +  -4.8  -3.18023   CCGGACGGTTCTAAA GCATGAG-GCGAATGCGCTTCTC GCC GCGAAGTTCATTTGCCCGCACGC TGTTGCTCATCGTCA  52 20
        envZ  408801 ..  408826 + -13.4  -3.61517   ACAAAAGAGGCATAG         GAAAGGGAGG TATTAC CCTCCCTTTC          TTCTTGACGCCGGAT 100 26
HF553_RS01830  412601 ..  412612 +  -5.8  -3.30124   TTTTTGCCGGATGGC                GGCA TAAA TGCC                 TTATCCGGCCTACGG  56 43
        nudE  417834 ..  417847 +  -9.5  -5.14563   AAACACAATAAAAAA               GGCGC CGGA GCGCC                TTTTTTGATCAGAAC  93 99
HF553_RS01865 NONE
HF553_RS01870  421827 ..  421840 +  -3.7  -3.53419   TTAACGAGGAGCGCC               GCCCG TGAA CGCGC                TCTTTGATATCTGGT  52 5
HF553_RS01875 NONE
HF553_RS01880 NONE
        hofQ  423953 ..  423968 +  -7.6  -2.84878   GCTTTTCGTTGCTTA              CGCATT GATT AATGCG               CTTTGCCTTGCCGAA  59 139
        aroK NONE
        aroB  425986 ..  426010 +  -5.8  -4.28432   CAACAAGAAAGGTCA          GACTGATATT GCGTA GATGTCAGTC          TTTTAGCTTCAGGTT  67 41
        damX  427486 ..  427507 +  -6.6  -2.97613   AGGATGCTGTCGGAG           CTTTCTCC ACAGCC GGAGAAGG            TGTAATTAGTTAGTC  56 166
         dam NONE
         rpe NONE
         gph NONE
        trpS  430907 ..  430920 +  -9.5  -5.76633   AGAACTGTAAAAAAA               CCGGG AAAT CCCGG                TTTTTTTGTATCTGC 100 127
        ppiA  446432 ..  446452 + -11.8  -4.46155   CATAAAACATGCCTG            CGCGGGTG CGAGC CGCCCGCG            TTTTCTCCCTGTCTC 100 36
HF553_RS01970 NONE
HF553_RS01975 NONE
        pabA  447911 ..  447929 +  -3.2  -2.94888   CATTGAGTGATTTTT             TATTCATA TTT TGTGAGTA             TAATTTCACTGAATT  44 52
HF553_RS01985  449191 ..  449227 + -11.5  -3.16437   GTGGTGGCCTGATGG    CGGATTGCCGGATAAGC GTA GCGCATCCGGCAGTCGG    TCTTAACCTTTTGTA  81 29
HF553_RS02000  452713 ..  452753 +  -5.4  -5.00895   GATTGCGGCGTAACA CGTG-ATGCCGGATGGCGGC GTG GCC-TTATCCGGCCTACCCG TTTTTATCTCGTAGG  78 28
HF553_RS02020  455759 ..  455778 +  -7.9  -3.30741   CCGCCCCGTGCGTTA            GAGCCTA ATGGGA TAGGCTC             TTAGTCGTTCTGCAT  65 267
        kefG NONE
        kefB NONE
HF553_RS02045 NONE
        slyD  461370 ..  461384 +  -8.5  -6.30182   TCGGGCACAAAAAAA               GCGGG TTAAC CCCGC               TTTTTTTTTGTCTCA 100 191
        fkpA  462664 ..  462685 +   -13  -6.09888   AATAAAAACTGAGAG           CCGCCGCT TGTAAT AGCGGCGG            TTTTTTTTATTCAGG 100 36
HF553_RS02065 NONE
        tusD  464032 ..  464044 +  -2.7  -2.53748   CGATCGGGTGGTGCA                GTTTT AAT GAAAC                GTATTGCATTTGTCT  40 19
        tusC NONE
        tusB  464745 ..  464767 + -10.6   -4.7268   CGCCCTAAAATTCGG           CGTCCTCATA TTG TGTGAGGGCG           TTTTATTACGTGTTT  95 81
        rpsL NONE
        rpsG  465781 ..  465804 +  -8.9  -4.21275   GTCATAGTCACCAGG          CGGGCG-CTT CAGGT AAGTCGCCCG          TTTTGGATAACTTAA  82 51
        fusA  467993 ..  468018 + -13.3  -2.78935   AAAAACCAAAATCCC         GTGCTCTCTCC TGAA GGGGAGAGCGC          TATAGTAAGGAATAT  85 52
         tuf  469252 ..  469267 + -11.8  -5.11063   GTTTTGAATTGAAGA              GGGCGC TTCG GCGCCC               TTTTTGTTGCCTGCT 100 55
         bfd  469600 ..  469610 +  -5.4  -5.78622   TTAAAGAGATCGCCT                 GAGT CAC ACTC                 TTTTTTTTGACATCC 100 24
         bfr  470153 ..  470175 +  -5.7  -2.52623   GGTTACCGATTAACC          GTCTGGAAAG AAAA CTTTCCA-AC           CTGTTATGAAACCCG  49 28
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  475973 ..  475998 + -12.7    -5.252   CGCATTCTCAACGAA         TAAACGGCTCA GCGA TGGGCCGTTTA          TTTTTTCTACCCATA 100 48
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR  479003 ..  479013 +  -3.2  -3.32963   ATGCTGCCCGTGAAG                 CTGG CCT TCAG                 TTCTAAGGTAGAGGT  48 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ  481675 ..  481704 + -12.3   -4.6645   TTTCTTGCAAAGTTG       GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC       TTTTGTATGTCTGTA 100 55
        rpsM NONE
        rpsK  482543 ..  482561 +  -4.4  -4.15508   CGTCCGCCGAAAAAA             CGTCGCGT ATA ACGCTTCG             TTTTCCAGGTTAGTT  64 14
        rpsD  483193 ..  483211 + -10.4  -3.14132   ACACCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TTAGTACCAAAGAGA  74 10
        rpoA NONE
        rplQ  484668 ..  484681 +  -9.5    -5.626   AGTAACGTAAAAAAA               CCCGC TTCG GCGGG                TTTTTTTATACCCTC 100 46
HF553_RS02260 NONE
        zntR  485573 ..  485591 +  -4.4  -3.61244   GATTTATTGAACCGA             CGGGGCTA CAC TCGCGCCG             TTAATTTATACAATC  55 39
HF553_RS02270  485883 ..  485917 +  -2.1  -5.09426   AATAACACTTCCTCT    TTAGAAGGCGCTGGCG GAGC TGCCGGC-TCTTCTGC     TTTTTTACGGTTGAG  74 22
        dprA NONE
HF553_RS02305 NONE
HF553_RS02310 NONE
        tsaC NONE
        aroE NONE
HF553_RS02325  494560 ..  494598 +    -8  -4.08767   ATTGGCGGAGTACTG   CAGGCCCGATCTCTCAGC ATC GCTCAGGGGGCGGATCTG   TTTTACCGGACTGCC  77 73
HF553_RS02335  495290 ..  495304 +  -6.4  -3.12351   GGTTGAAGAGAAAAA               TCCTGA AAT TCAGGG               TTGACTCTGAAAGAG  56 7
HF553_RS02340 NONE
HF553_RS02345  497255 ..  497290 +  -9.2  -4.00532   AGGCGTTGCCATCAG    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
HF553_RS02350 NONE
         rrf NONE
HF553_RS02360 NONE
         rrf  500783 ..  500817 + -16.7  -3.10967   CAGACATCAAATAAA    GC-AAAAGGCCCAATC GAAA GATTGGGCCTTTTTGC     ATTTATCTCTCTATG 100 36
        envR  507574 ..  507591 +  -4.1  -3.63968   TCATTCTCTACCCCT             TCTGCCA CAAT TTGCAGA              TTTAACGCTTTCGCC  53 194
        csrD  522714 ..  522741 +  -5.6  -3.85698   GATTGCTGCTGATTT        TTTCAGCCCTGAG GGA CTCAG-GCCGAGA        TTTGTAACAAAGGAA  61 172
        mreB  523901 ..  523915 +  -2.8  -2.75064   ATGCACGGCGGCGAC               CTGTTC AGC GAAGAG               TAGTTGGATACGGGC  41 8
        mreC NONE
        mreD NONE
         maf NONE
         rng NONE
HF553_RS02490 NONE
        tldD  533303 ..  533316 +  -5.3  -3.96999   TCACTACCTGCACTT               TAAGC GGCA GCTTA                TCTTTTTCGGTGTAC  63 240
HF553_RS02505 NONE
        aaeA NONE
        aaeB  537449 ..  537467 +  -8.1  -5.76633   GCTAACCCACAAGAA             CCGATGC CAAAA GCGTCGG             TTTTTTTGTCTATGG 100 36
HF553_RS02520  538157 ..  538177 + -12.5  -3.76888   AGGCGCATCTGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTATGACTA 100 106
HF553_RS02525  538811 ..  538827 +  -4.3  -3.06261   AAATGGTGCCCATCG              GTTGCAG ATT CTGCGCC              TGTTCCGCGTTGACC  47 243
         mdh  541504 ..  541523 + -12.8  -3.98913   CTGTTCCTGCCCGAT            GCCGGGGC TTTT GCTCCGGC             TTCTTTGACTGTAAA 100 42
HF553_RS02550 NONE
HF553_RS02555 NONE
HF553_RS02560  544359 ..  544377 +  -4.5   -2.5474   ATCCTTTTCCCTTTT             CATCCGT AATTA ACGGAAG             CTGTTCTGACTAAGG  46 17
        ttdA  545278 ..  545291 +  -2.4  -2.98447   TTACACCATTACGTC               TCAC AGCGGA GTGA                ATTTCTGATGACTAA  41 4
        ttdB  546049 ..  546065 +  -3.6  -3.82519   TAGCCCCATTATCGT              GCCTCC TGCCT GAAGGC              TATTTTATGACTAAT  53 158
HF553_RS02575 NONE
        oadA NONE
HF553_RS02585 NONE
HF553_RS02590  550174 ..  550196 +  -8.4   -4.4078   TGACTAGCCGTCGAA           CGACGCGG GCAAAAG CTGCGTCG           TTTTAGTTCGACGCC  84 34
HF553_RS02610  554786 ..  554825 +  -5.9   -4.0162   TCCCAAACTTTCTCT GTGCCGGCTAAACATATCC GAGG GGGTAGGTTTA-CCGG-AC  TTTGTCGTGTGAACC  65 210
        rplM NONE
        rpsI  555779 ..  555792 +  -9.5  -5.64274   CTGTTAGCGAAAAAA               CCCGC TTCG GCGGG                TTTTTTTATGGCTAA 100 64
HF553_RS02625 NONE
        sspA NONE
        sspB  558104 ..  558121 + -12.7  -4.97158   TAGTAAAATAATCAA             CAGGCCC TGAA GGGCCTG              TTTTGTTTGGTCTCC 100 30
        nanR  559031 ..  559053 +  -4.8  -3.60925   CCCAGTTTAGTGAAG           CAGATCGC ACTATAA GCGTTCTG           TATTATTTGCTGCTT  57 57
        nanA NONE
        nanT  561639 ..  561661 + -16.4  -2.98942   GAAAAGTTAATCCGC           TTGCCCGGTT TTC AACCGGGCAA           TATCTGTAAGGGAGT 100 31
HF553_RS02655 NONE
        nanK NONE
HF553_RS02665  564178 ..  564194 +  -4.4  -3.61654   AGCATCTCTTTCACC             CG-CGTG ACGC CACGACG              TTTCGGGTAAGTGTC  55 498
HF553_RS02695  575219 ..  575244 +  -8.3  -2.60813   TGGATACCACCTGTA         GCGTAGCGT GATGAGGG GCGCTACGC          ATATTTCGCACAATA  63 20
        arcB  577702 ..  577718 +  -2.1  -3.86266   CCAACACCAGGGAAA              TCGTGGC TGC GCCGTGC              TTATTATGATGATGT  53 73
        elbB NONE
        mtgA  579274 ..  579285 +  -7.2  -3.50393   ATTTTGTCGAATGGC                GGCG CGAA CGCC                 TTATCTGGCCTGCGA  65 40
        mlaF NONE
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB  591589 ..  591604 +    -9   -2.9911   CCGGCACTTTTACCG              CGCTGA TTTA TCAGCG               TAATCTTTTGCTTAT  68 117
        ibaG NONE
        murA  593272 ..  593295 + -11.7  -5.40072   CTGTACGCTGAATAA          CCCCCGCGA ACGCGA TTGCGGGGG           TTTTTTTACAGGCAC 100 45
        rplU NONE
        rpmA  595676 ..  595696 +   -14  -4.75174   CGGTAACGGATGAAA            GCCCCGCA CCTGT TGCGGGGC            TTTTTACATTCGATG 100 54
HF553_RS02830 NONE
        cgtA  597978 ..  597997 + -16.4  -4.91285   GCCTATAAAAGCCAA            CGGGCCGC ATTT GCGGCCCG             TTTTATTATGTTCGT 100 73
        greA  600267 ..  600281 + -12.8  -4.36914   TAAAGAAAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACGGAGA 100 74
        rlmE  601479 ..  601493 +  -2.8  -3.40899   TAGAGTATCCTGACG               CTGTTT TTA ACACAG               TTGTAATAAGAGGTT  46 84
        ftsH  603498 ..  603517 + -12.8  -5.86609   TAGCGCTCACCGAAA            CCCTGGGG CTTG CCCCGGGG             TTTTTCTTTTTTTAA 100 65
        folP NONE
        glmM  605761 ..  605776 + -11.8  -3.14132   TTAAGTGACTAAAAA              GGCGGC GGTT GCCGCC               TTACTGCCCGCAAAA  83 45
        secG NONE
HF553_RS02880  606412 ..  606427 +    -9  -5.92337   ATATTCCAGAAAAAA              GACGCT GAAA AGCGTC               TTTTTTTTCGTCTGT 100 41
HF553_RS02885  607845 ..  607860 + -11.8  -3.08679   GATATTCACAAAAAA              GGCCGC TTTC GCGGCC               TGTTGCATCAACGAC  81 74
HF553_RS02895  609772 ..  609787 + -10.4  -5.60689   TTCAGTTATCTAAAG              CCCCGA TTTA TCGGGG               TTTTTTGTTATCTGA 100 152
        rimP NONE
        nusA NONE
        infB  614716 ..  614730 +  -9.2  -5.61913   AAGAAATTTAAAAAG               GGGGCT TAT GGCCCC               TTTTTTGTCTTTATT 100 203
        rbfA NONE
        truB  616155 ..  616169 +  -2.8  -3.95071   GTAGAATACCGCCGC               TTAACG TCG CGTAAA               TTATTTAACAGTTTA  54 75
        rpsO  616548 ..  616564 + -10.8  -5.00884   GAGTTTCAGAAAGAG              GGGGCC TTCAT GGCCCC              TTTTTTCCAGCAGAT 100 48
         pnp  618914 ..  618934 + -18.3  -3.57792   GTAAGGTAGCCTTTT            GCCCTCCGC AGT GCGGAGGGC            TTTAGACCTGGCTGG 100 37
        nlpI  619930 ..  619955 +  -7.5  -4.04023   CGTAATCTTTTTGAT         TGCCATCACCT TCGC GGGTGAGGGCG          TTGTTGTTCGTTAAT  72 59
        yrbN NONE
        deaD  622008 ..  622030 + -13.4  -6.11392   AAAGTAAAATATACA           GCCCCGATCG TCA CAATCGGGGC           TTTTTTTATTTCTTT 100 69
         mtr  623370 ..  623396 +  -8.7  -2.61144   ACCAGTAATTGAACG         AGCCGGATGAG CTGTT TTCATCCGGCA         ATATTTCACAAGTCC  63 33
HF553_RS02960  624934 ..  624946 +  -4.7  -3.89215   GCAGAATGGACACCA                GCCCG TGG CGGAC                TTTCGCTTTATCACC  58 128
HF553_RS02980 NONE
HF553_RS02985  629163 ..  629199 +  -5.9  -3.75169   CAAACGCTTCGCGTT   CCG-TCACAAGGCGCT CTTTCT GGCGCTTTGTGAGCTG    TTTGATGCGATACTC  60 74
HF553_RS02995  630239 ..  630256 +  -3.3  -5.72207   AATAGCCTTATCAAT             GGTGACG CTGG CCTCGCC              TTTTTTTCCTTTCAC  89 365
HF553_RS03005  631218 ..  631229 +  -7.2  -3.43338   CATTTTTATCGCCAC                CCGG CACA CCGG                 TTACTTAATATACGT  65 80
        rsmI  636116 ..  636126 +  -3.2  -3.89822   AACCTTCGTTAAACG                 TGGT AAT ACCG                 TTTGTCGCATCAATA  54 392
        garL NONE
        garR  646348 ..  646376 + -10.2  -2.64803   TCGCTAACGACGTTG        TGCCCGGATGGC GTGTA GCGATCCGGGCC        TGAATTTCAGGCTGG  70 34
        garK NONE
        rnpB  648000 ..  648013 +  -9.5   -5.0925   CACTTCTTCATAAAA               CCCGC TTCG GCGGG                TTTTTGCTTTTACAG  93 36
        tdcA NONE
        tdcB NONE
        tdcC NONE
        tdcD NONE
        pflB  655904 ..  655943 +  -2.7  -3.08798   TTACTCAGGCGATGT  AACGTGAACGGGGCGATC GTGTG GATCGCCCCGCG-ACGGA  TCTTCACTGAACGGT  43 24
        tdcG  657400 ..  657419 +   -15  -5.58179   CAGAAGCTGAGAAAA            GGGCGCAC CAAA GTGCGCCC             TTTTTTGTTGTGATA 100 86
HF553_RS03125 NONE
HF553_RS03130  660545 ..  660557 +  -5.5  -4.07885   TGGCGCTCATCGCCT                CCTGT ACG GCAGG                TTTTACCACGGGCTG  65 248
        yhaJ  662329 ..  662339 +  -8.2  -3.53012   TCCGGAAAATAAATA                 GCGC GCG GCGC                 TTTAAAAGCGGCGCC  67 29
        rlmG  674453 ..  674469 +  -9.4  -2.66733   TTCCGGGCGCAGACC              GCCTGC CTGTT GCAGGC              TGGTATCAATTCCCC  59 499
HF553_RS03235  679605 ..  679645 + -17.1  -2.78384   GGTCGCAACGGTAAT G-ACATCCGCCCGGT-AGC AACAA GCTTACCGGGCGGATGTGC TCTGATAGAAGGCGG 100 52
HF553_RS03245  682544 ..  682558 +  -7.8  -5.40072   GCCATTGCGCGCCGT               TCGCGG TAA TCGCGA               TTTTTTTCCGCCCGC 100 258
HF553_RS03255  683988 ..  684005 + -11.3   -3.5275   GTCAGAAACAAAAAA             GCCACTC TTTA GAGTGGC              TTAATTATATGATTT  85 59
HF553_RS03275 NONE
HF553_RS03280  687546 ..  687556 +  -2.4  -2.62184   TCTGGTCACGACGAA                 TGCC ACT GGCC                 TGATGTGAGGGAACA  39 7
HF553_RS03285 NONE
HF553_RS03290 NONE
HF553_RS03295  688628 ..  688664 +  -2.3  -4.27316   ACTAATTAACTGCCC    GAATTTTTTGGCCAC GGTTCAA GTGGTCGGGGGATTC    TTTTGCCTTAAGGAA  57 36
HF553_RS03300 NONE
HF553_RS03305 NONE
HF553_RS03310 NONE
HF553_RS03315 NONE
HF553_RS03320  692802 ..  692817 +  -6.2  -4.18983   GTGCTTAAAGGTGTA              CTGTAT GTTT ATACAG               TTATTGTTTGTATGG  70 106
HF553_RS03325  693196 ..  693228 +  -7.7  -3.67622   ACATCTGAACAGGCG      CAGTAAATATCGGCA ATC TGCCGGTGTTTCCGG      TTCGTTTTACGAATA  65 174
HF553_RS03345  697114 ..  697132 +    -6  -2.81888   AATTTCAGAGAAAGC             CGGGAAGT TTA ATTTCCTG             TAATTCACTTTAGCG  53 4
HF553_RS03350 NONE
HF553_RS03355 NONE
HF553_RS03360  699201 ..  699218 +  -2.6  -4.36903   GTGGAAACCGGTCAG             TCCGCC TTTTTC GGGGGA              TTTATGTTTAGTGGA  60 101
HF553_RS03365 NONE
HF553_RS03370 NONE
HF553_RS03375 NONE
HF553_RS03380 NONE
HF553_RS03385 NONE
HF553_RS03390 NONE
HF553_RS03395 NONE
HF553_RS03400 NONE
HF553_RS03405  703980 ..  704007 +  -6.3  -3.53012   GGAATATACAGGAAT        TGCTGTGGCCA ATGGTG TGGCTAAAGCA         TTTAAAGGCACAGAA  60 171
HF553_RS03410 NONE
HF553_RS03415 NONE
HF553_RS03420 NONE
HF553_RS03425 NONE
HF553_RS03430 NONE
HF553_RS03435  710620 ..  710645 +  -2.5  -3.09028   GACTGGCCGGAGGTA         CCGGATGTG GCGTGAAG CGCGTCTGG          CTTTTACGGATTCTC  43 11
HF553_RS03440 NONE
HF553_RS03445  711845 ..  711855 +  -6.8  -2.86944   CAGGGTGCTGAAGCC                 CGTC AAT GACG                 CTTTGGGTTAATGAT  56 4
HF553_RS03450  713585 ..  713597 +  -9.1  -5.49729   TTCTCTCTTTTCAGC                CCGCA TAA TGCGG                TTTTTTTACATCCTT 100 41
HF553_RS03460  716116 ..  716132 +    -3  -2.53255   GGAGTTCCTGGTTGC              TGTACG AATTG TGTACA              ATTGATGGGTATTGT  40 42
HF553_RS03465  716873 ..  716895 + -14.2  -3.93583   TGGAAAGTCTCCTTT           GGGGATAGCG AAC TGCTATCCCC           TTTCTCAGTGAGTTA 100 73
HF553_RS03475  719576 ..  719590 +  -7.2   -2.5459   TATAATTAAAAAGGA               GTTTCA TGA TGAAAC               GTGTCTCTTTCTCTC  57 83
HF553_RS03480  720425 ..  720437 +  -3.4  -4.41206   GCAATCATTACCCGG                GAGT GGCCA ACTC                TTTTATCGAGTACTT  62 123
HF553_RS03485  721449 ..  721461 +  -2.7  -3.58726   TTGTGTATTGGGTAG                GTTAA CTA TTAGC                TTATCTCTGAAAGCA  50 365
HF553_RS03490  722097 ..  722107 +  -3.2  -3.26722   AACTTTGGCTACAGC                 GGTT TTT GACC                 TATTGTAACTGTAAG  46 17
HF553_RS03495  722720 ..  722740 + -13.3  -3.36569   TCAGGTGATGCATAA            GGGCCTTTC GCT GAGAGGCCC            TGTTTACACAATTAA  95 46
HF553_RS03510  725350 ..  725363 +  -3.1  -3.25823   ATCCCGCTCACAAAT               TCGAA TCGT TTCGG                TTGCTATCCGAAACG  46 47
HF553_RS03515 NONE
HF553_RS03520 NONE
HF553_RS03525  730318 ..  730336 + -14.6   -2.9732   CCTGAAATAATTCCA             CTGCCGTC GGT GACGGCAG             TACTTTCGGTTCACC  89 36
         crr NONE
HF553_RS03535 NONE
HF553_RS03540 NONE
HF553_RS03545 NONE
HF553_RS03550  734018 ..  734059 + -13.7  -3.33492   ATGGAAACCTGGTTC TGAACACTAACGCTCCCGG TGTA CCGGGAGCGTTGCCGGTCA  TTGTCCCGTAAATGA 100 23
        ltrA  738072 ..  738105 +  -8.9  -3.31269   CCGGTTCGGGGAGGA     GAGGCAGGGAAATAGT CCG ACTACG-CCCTGCCTC     TTACTCTACTCTGGA  71 73
HF553_RS03610  747987 ..  748014 + -17.8  -5.45652   TGCTGTTTTGTACCT        GCCGGTACCCAT ATTT GTGGGTACCGGC         TTTTTTATTCACCCT 100 338
        ag43  750914 ..  750938 + -21.5  -4.54727   GGTCACTCCCCTTCA          GGCCCCGGTCA TCA TGACCGGGGCC          TTTTACTTTCAGGGA 100 47
HF553_RS03620  751219 ..  751244 + -16.9  -5.04601   CATTTCACCCATCAG         GCCGCGTCTTC TCCG GGAGACGCGGC          TTTTTCATTTATACC 100 48
HF553_RS03625  752085 ..  752096 +  -4.4  -2.83908   TAATGGCTGAAACGC                TGCT GGAG AGCA                 TGTGCTGATGCCTTT  48 6
HF553_RS03630 NONE
HF553_RS03635 NONE
HF553_RS03640  753473 ..  753487 +  -4.3  -3.28712   AACTGAATCAGGGCA               TTCTG ATGAG CAGAA               TTATCACCACCACCG  52 35
HF553_RS03645  754144 ..  754162 +  -3.8   -2.5758   ATCGTTAAACTATCA             TTCACCGA TTT TCTGTGAG             GATTTTATCGTGTCA  44 47
HF553_RS03650  754565 ..  754586 + -10.1  -2.53089   ATAACCCTCTGCTCC           GGCCTGGTG CTTT CACCACGCC            ACTTTTCCATTTCTC  70 50
        cbtA NONE
HF553_RS03660 NONE
HF553_RS03665  755731 ..  755753 +  -9.9  -4.61873   ACTTCATTCCCCTGA          CGCCAGCCTG AATA CAG-CTGGCG           TTTTCGTTTATAAAC  91 55
HF553_RS03685 NONE
HF553_RS03690 NONE
HF553_RS03695 NONE
HF553_RS03700  760165 ..  760175 +  -2.4   -3.9461   AAATTAATGGCGTAA                 ACCC GCC GGGC                 TTCTTATTGCCCAAA  53 51
HF553_RS03705 NONE
HF553_RS03710  760657 ..  760671 +  -5.7  -2.79796   AACATTACAACGGAG               GTGCT GTATG AGCAC               TATCCTGAAATGGGC  50 15
HF553_RS03715 NONE
HF553_RS03720 NONE
HF553_RS03725 NONE
HF553_RS03730  764635 ..  764654 +   -15  -4.53636   ATCGTTTTTGCTCAG            GCCCGCCA GAAC TGGCGGGC             TTTTGCTTATGTCAT 100 160
HF553_RS03735 NONE
HF553_RS03740  765902 ..  765918 + -10.8  -5.30686   TGCGTTTTGCATGAA              GCCCGG ACAAA CCGGGC              TTTTTTATGCCTGTT 100 49
HF553_RS03755 NONE
HF553_RS03760 NONE
HF553_RS03765 NONE
HF553_RS03770 NONE
HF553_RS03775  772294 ..  772308 +  -2.8  -2.59927   ACCACGGCGCAGACC               GTCC AGCTATG GGAC               TGAATTATGACGCTT  40 8
HF553_RS03780 NONE
HF553_RS03785 NONE
HF553_RS03790 NONE
HF553_RS03795  773861 ..  773876 +  -8.2  -2.78596   GCTGGATGAAACTGA              GGCCGC CTGG GCGGTC               TGTGCTGACAAAGTG  60 59
HF553_RS03800 NONE
HF553_RS03805  774780 ..  774834 +  -2.7  -3.64599   ACACTCTGCTGCGCT GGCTGGCGGGGTGATC-TTTGTGTCA CCGC TGGCACAAGCGCCCACGCTGCCTCCC TTTCCCCTCTGATGG  50 12
HF553_RS03810 NONE
HF553_RS03815 NONE
HF553_RS03820 NONE
HF553_RS03825 NONE
HF553_RS03830 NONE
HF553_RS03835  779562 ..  779579 + -12.7  -5.43866   CGAAGATTAATCCCG             TCCCCGC AACT GCGGGGA              TTTTTTTACCCCTTC 100 31
HF553_RS03840 NONE
HF553_RS03845  781398 ..  781418 + -10.4  -3.10244   TCTGATTAACCTTAA           C-GGCGCGG GCAG CCGCGCCAG            TAGTTTATTAACAGG  73 36
HF553_RS03850  781757 ..  781777 + -11.9  -3.42395   TGACGGTTGATGATC            TGGTGGCAG ATA TTGCCACCA            TCTTTCACTGGTCGC  88 38
HF553_RS03855  781885 ..  781898 +  -8.1  -2.82623   GATGAGTGATAATAA               CCTGC GACT GCAGG                TAGTTCTGGGGGCGG  60 32
HF553_RS03860 NONE
HF553_RS03865 NONE
HF553_RS03870  786250 ..  786262 +  -2.7  -2.97166   CACAAAACGGATGTC                TGATG TAT CATTA                TGTGATTAATTAAAT  42 48
HF553_RS03875  786985 ..  787003 + -10.3   -3.2281   TAAAGATAAGAAAAA             GCCACCT AAAAA AGGTGGC             TTAACTTAATGATTT  74 496
         mug  787826 ..  787843 + -14.1  -3.95073   GGCCTGATAAAAAAA             CGCCGCC TTGC GGCGGCG              TTTATACGTGTGCGG 100 112
        tsaD  793499 ..  793525 +  -2.2  -3.01712   CCGGTCCATCCTTGT        GGGCC-GAGCC CCAGAC GGTTGAGGCCC         TCTTCCAGACGCAGC  42 227
        folB  794668 ..  794686 +  -3.1  -3.40051   AAACGGTTATATATG             GGGTCTT AACGC GAGATCC             ATTTTTGCAGTGTTT  48 69
        bacA  795615 ..  795646 + -11.6  -3.64703   GCCTGGTAAGCGCAG      CGCCATCAGGCA ATTTATCG TGCCGGATGGCG       TTTAGCTGGCGGGGG  87 97
HF553_RS03950  799174 ..  799203 +  -8.5  -2.94708   TATGCGGACTTGTAG       GCCGGAT-CAGGCG AAA CGCCGCCATCCGGC       ATTATTTAAAGGATA  65 90
        glnE  802053 ..  802065 +  -5.5  -3.82484   GCAAGCTGGCGGAAG                TGGCT GGT AGCCG                TTTGAATTATGCTAT  61 8
        hldE  803632 ..  803645 +  -2.3  -5.76949   TTCGACGCGTATCTC               GCGGT TGAC GCTGC                TTTTTTTTCGACCTA  91 106
        glgS  806837 ..  806864 +  -9.8  -4.90906   ATTATTCAGATCTTA        TATGAGCGGGCC GTCA GGCCCGTTCACG         TTTTTACTCTTGTGG  93 68
        ribB  808279 ..  808298 + -12.2  -5.50925   TCATGGTTGAAAAAA            GCCGATGA GATG TCATCGGC             TTTTTTGTATTCCTT 100 50
        ygiD  814372 ..  814390 +  -2.4  -4.08064   AACAGCGGCAACAAC             GCTTTATT GGA GATAATGC             TTTTCCAGGCCGGTT  56 448
        nudF NONE
HF553_RS04040 NONE
        cpdA NONE
        yqiA NONE
        parE  822138 ..  822157 +  -8.6  -2.94365   TCTCGCGGATCTCGA            CGTGTAAC GGTT GTTGCACG             CTTTATCCGGTCTGC  65 19
HF553_RS04080 NONE
HF553_RS04085  826802 ..  826838 + -13.8  -2.58822   TTAACTTCCTCGTCA    CCTGGCTCACGGTTTG TGACT CAGACCGTGAGATAGG    GTATTATCTGCGGCA  86 37
        parC  829214 ..  829257 + -13.3  -3.61103   CCATCCGGCGATCTG CCGT-TGCCGGATGACGACGC AGTA GCGTC-TTATCCGGCCTACGG TTTCAGATCGGATTA 100 80
        plsC  830189 ..  830209 +  -3.9  -4.18762   TAGAAATCATTTTTT            CAGGCACAA CTC TTTAGCCTG            TTTTACATGGAGCTT  62 61
        ftsP  831846 ..  831857 +    -3  -3.67976   TTTGCTGCGGATGAT                GAAA CGCT TTTC                 TTTCCGATTAGTGCA  50 232
HF553_RS04105  832644 ..  832656 +  -4.9  -3.17382   GTGCCGGGCAATATA                TACAA TCA TTGTA                TTCACTATAGTTATT  52 275
HF553_RS04110 NONE
HF553_RS04115 NONE
HF553_RS04120 NONE
HF553_RS04125  839559 ..  839578 +   -15  -4.77036   TATGCCTCACGAATT            CTGGCCGC CAGC GCGGCCAG             TTTTTCATCATCAGC 100 177
HF553_RS04150  844919 ..  844933 +  -5.6  -2.61912   CAACGAAGCGTAACC               GGGCCA TCC TGGCCG               ATTATGGATACGTCA  50 62
        exbB NONE
        exbD  848370 ..  848397 +  -9.9   -5.8187   TCGCTGATACTGTAG       GCCGGGTAAGGCG AAGT CGCC--ACCCGGC        TTTTTTTATTGCCTA 100 45
HF553_RS04190  850884 ..  850899 +  -3.2  -4.43911   ATGAGATTTAGAGCC              TATCCC ATTA GGGCTA               TTTTACTTGCCATTT  62 30
HF553_RS04195  851913 ..  851928 +  -7.6  -2.81055   CGATAACGAGAGTGC              GTCATC GTCT GATGAC               TAATCTCTTATATTC  58 286
HF553_RS04200 NONE
HF553_RS04205 NONE
        hybO NONE
        hybA NONE
        hybB NONE
        hybC NONE
HF553_RS04230 NONE
        hybE NONE
        hypA NONE
        hybG  860758 ..  860783 +  -4.1  -3.28712   TATATCGCTCTATAA         TCGTTGTATAA TTAT TTATATATCGA          TTGTGGGGCGAAACC  50 59
HF553_RS04250 NONE
HF553_RS04255  862673 ..  862693 +  -3.9  -3.25652   TTTTCGAAGTCGCTG            GCGTCATGG CGT TCGTGAAGC            TGTTCGTTCAATGGG  47 136
         gss  865592 ..  865628 + -13.8  -3.81488   TAACGGGGTCATTCT   C-GTCGGGATATCGGCG TGGG TGCCGATATCCCGCCTG    TTGTGTTTACCAGCG 100 38
HF553_RS04270  867436 ..  867469 + -16.9  -3.14344   TGGCTGTGTTTGTTT     ACCCGAATCACTTAC CTTA GTAAGTGATTCGGGA      TTAATCAGCAACCTC 100 154
HF553_RS04290  873558 ..  873577 +   -15  -3.25539   GCTACCGGGTTCTAA            CGGCCACC TTCG GGTGGCCG             TCTTCATTACCCTTA  95 76
HF553_RS04295 NONE
HF553_RS04300  875917 ..  875928 +    -3  -5.27779   GAATAGTTTGTTTTT                TGAT TTAA ATCA                 TTTTTTAGTGTTCAC  76 199
HF553_RS04305 NONE
        iraD  877349 ..  877362 +  -5.2  -3.69354   TAATGCAGGAAGGAA               CGCC GGGCCG GGCG                TTTAACATTATCCCA  57 41
HF553_RS04320 NONE
HF553_RS04325  880841 ..  880863 +  -6.3   -2.6155   TAGCGTTGGCATTAC           TGGGGAG AATAACGCG CTCCCCA           CTTGCTATTAGCGCG  53 61
HF553_RS04330 NONE
HF553_RS04335  883187 ..  883203 +  -6.6  -3.09234   TGTACCGAGGACATT              CTGGTT CGGGA AACCAG              TTCCGTGCGATTTAT  54 164
HF553_RS04360  888864 ..  888889 +  -7.5   -3.7941   TCAAAAATGTTAATT         CATAGCGGCAG GAAA CTGTCGCCGTG          TTGTTGTAACAAATG  68 28
HF553_RS04395  893542 ..  893554 +  -4.9  -2.53345   ATAATAAGAATATCA                TCAAT AAA ATTGA                GTGTTGCTCTGTGGA  48 37
    blaCTX-M  894662 ..  894695 + -13.3  -3.92522   GACGGTTTGTAATAG     CGGAAACGGAATGGG GAAA CTCATTCCGTTTTTG      TTTATCGCCTTAGAC 100 29
HF553_RS04455  901000 ..  901028 +  -5.9  -4.24948   TGTTGTGTTGTTTTC        AGTTCTCTGGTCA GTC TGTCCAGAGTACG        TTTTGCATCTGATGA  71 101
HF553_RS04465  904512 ..  904524 +  -5.5  -4.28548   GCTTTGCGGGTGAGC                CGGGT ACA ACCTG                TTTTGCTCAGTAACT  67 325
HF553_RS04475  907242 ..  907258 +  -5.1   -5.5112   GAGTGTGCGCACTGG              TGGAAGC ATG GCTTTCG              TTTTTTATTGATCGA  93 266
HF553_RS04480  909292 ..  909306 +  -5.6  -2.79796   AGGAATTTTACACCT               GTCTGG TCT CCTGAC               TGTCCTGGCATACGA  50 153
HF553_RS04490  910033 ..  910046 +  -2.3  -2.72461   TGAAAACACCGTTCA               GCAGA TTAA TCCGC                ATTTGCACAACCTTC  40 38
HF553_RS04495  910321 ..  910331 +  -3.2  -3.41051   CACGAGGAGCAGCAG                 CATG AAA CGTG                 TTGTGATGCCGGTAC  48 21
HF553_RS04500  911406 ..  911418 +  -7.7  -5.55855   GGTCGTCAGGTATCC                CCACT TTA AGTGG                TTTTGTTTTTTTCCC 100 289
HF553_RS04525  913714 ..  913737 +  -9.5  -3.58037   TGACGGATAAAAAAT          CCGCACGAC CAGACA GACGTGCGG           TTTACGAAATTCGTA  77 364
        sul2  915859 ..  915870 +  -2.2  -3.08867   GTTAACTGCACATTC                GGGA TATT TCTC                 TATATTCGCGCTTCA  42 36
 aph(3'')-Ib NONE
HF553_RS04545  917732 ..  917749 +  -5.6  -3.65902   GCACGACATAGCCGG             TTCTCG CAAGGA CGAGAA              TTTCCCTGCGGTGCC  59 209
HF553_RS04550  918235 ..  918251 +  -6.5  -2.87132   ACGCTGCGTCCGGAT              CGGCTTC GTC GAAGGCG              TCTATCGCGGCCCGC  53 164
      tet(A)  920258 ..  920273 +    -4  -2.94912   CGCGTCCTTGCAATA              CTGTGT TTAC ATACAG               TCTATCGCTTAGCGG  46 200
HF553_RS04595  925125 ..  925158 + -18.5  -3.14931   TCAAGCACTGATGAA     TCCCCTAATGATTTT TATC AAAATCATTAGGGGA      TTCATCAGGACTCAG 100 516
HF553_RS04615 NONE
HF553_RS04620  930187 ..  930202 +  -6.2  -3.91984   TCTATTTCGGCGGCT              GATATC AGAC GATATC               TTCTTTACGGAATCT  66 24
HF553_RS04630  932420 ..  932433 +  -8.1  -3.07443   GACAACACCGTTACT               CCAGC GGCT GCTGG                TTGCCTCACATATAG  62 439
HF553_RS04640  936856 ..  936871 + -11.8  -4.78848   ATACGCACATGACAA              GCCCCG GCAG CGGGGC               TTTTGTATTTAAAAC 100 40
HF553_RS04645 NONE
HF553_RS04650 NONE
HF553_RS04655 NONE
HF553_RS04660  942305 ..  942333 + -14.7  -3.80276   ATTCTATTAATCTTG        ACCTGGTCTATCA AAA TGATAGACCAGGC        TTCTGTTATCTACAT 100 125
HF553_RS04670  943852 ..  943863 +  -3.6  -3.71649   TTACGAAGGAGGCTC                CCGG ACAT CTGG                 TTTAAAGTTTGAACA  53 304
HF553_RS04675  944886 ..  944899 +  -5.3  -3.10715   TGCTGAGAATGTTTC               CTGAA ATAT TTCAG                TTGACTGATGATAAA  51 22
HF553_RS04680  946025 ..  946042 +  -9.8  -2.72144   AGAGTTAATGATTTA             CCGGGC GTTAAA GCCCGG              CTTTACAAGAAGTGA  69 33
HF553_RS04685 NONE
HF553_RS04690  947964 ..  947994 +  -8.2  -3.79678   AAATGTCATACCGTT       CAGCAGCCAGCG TTGCCTT CCCCGGCTGCTG       TTATTGTAAGGCATT  71 91
HF553_RS04695  948249 ..  948268 +  -7.8  -4.14257   GACGTTCCTGTTTAC            GCCGCTAC ATTT GTGGTGGC             TTTATGATTATTCAG  74 39
HF553_RS04700  950243 ..  950254 +  -5.8   -3.0873   AATTCTTTCCCGCAA                CAGC TTCT GCTG                 TCTTAAAATGCTTTC  52 307
HF553_RS04710 NONE
HF553_RS04760  965139 ..  965149 +  -4.6  -4.24948   ACACGGTCTGCCAGT                 CGGT AAT GCCG                 TTTTGAGTGTAATAC  66 209
        trmB NONE
HF553_RS04790  970251 ..  970272 +  -9.3  -3.11024   GGGACTAATAAGTAC           AGGGTCGGC AAAT GCCGGCCCG            CTTTGTCTTGAGGGA  68 33
HF553_RS04795  971032 ..  971052 + -11.9  -5.35365   TCCTTTTTAAACAAT            GGCGTAGAT CGT ATCTGCGCC            TTTTTATTCTGTTTT 100 45
        ansB  972255 ..  972276 + -15.1  -3.24232   AGTATTAAAGATAAT           GCCCCGGTC GGAA GGCCGGGGC            TATCTTTGGAAGACC  95 33
HF553_RS04805  973425 ..  973471 +  -9.5  -3.62255   ACCGCCACAGGTCGG TAAG-C-GGCGCGCCATCAGGTA TTT TACCCGCTGGCGCGACAGGCTTA TTCCTTGTTATTCCG  77 63
HF553_RS04835  977864 ..  977880 +  -2.1  -3.08812   TGTATCCTGGCGAAC              CGGCGTT AAA ATCGCAG              CTTTGTTAAAACCAC  42 106
HF553_RS04840  978874 ..  978912 +  -9.5  -3.53761   AGTGCCATCCATATT   GAGCGGTAGCCCGACAA TAATT TCGTCCGGCTGCCACTC   TTTCAGCAAACGTTC  71 300
HF553_RS04885  986609 ..  986626 +  -6.3  -4.52703   GACTGAACAAGGGCG             CTCTTGT TAAC GCAAGAG              TTTTCTCGTGGTTTC  76 244
        yqgB NONE
        speA  988948 ..  988982 + -13.6  -5.92337   CGATTTACAAATCAA     TCCCTTCCTCGTCG GGTTTAA CGACGCGGAGGGGA     TTTTTTTTCATCTGT 100 172
        speB  990252 ..  990275 +  -4.6  -4.57073   TTCGGACTCCTGACG          CTGGGAGAACT GCG AGTTCACC-AG          TTTTTCGCCAAGATC  71 327
         tkt  993096 ..  993115 +   -15  -5.08088   TAATACGGCATAAAA            CGGGTCGC TTCG GCGACCCG             TTTTTATTCCCCCTT 100 45
         epd NONE
         pgk  998783 ..  998802 +   -15   -3.6053   AAGAAGTAATCGTTA            CGGGCAGG GATT CCTGCCCG             TTGATTTATCGCCGA 100 32
        fbaA  999977 ..  999996 + -12.2  -5.73339   GTCTGCTGATTGAAA            TGGCTTCC CTCG GGAAGCCA             TTTTTTTATCGTTAT 100 45
HF553_RS04960 1001115 .. 1001137 +  -4.1  -3.73904   TCTCTGGTTATTGAG          CGGATAAGCG TAGC CGCC-ATCCG           TTATTCAGTCTCTTT  55 90
        argO 1001873 .. 1001889 +  -3.7  -3.54475   TCGCGCATATGCACG              CGCTT TTCAACT AAGCG              TTGTCTGATGGACAA  52 12
HF553_RS04970 1002732 .. 1002757 + -12.5  -4.39828   CACGCAGTAATCTCG         CCCGGCCTGGG CGCT TCCAGGCCGCG          TTTTCTCCCGGTGTT 100 31
        rpiA 1004753 .. 1004766 +  -2.4  -2.92924   GTCAGGGCAAATTTG               GTGA CATGTA TCAC                GTTTAATCGTTTGCC  41 78
        serA 1006211 .. 1006232 + -11.6   -3.0955   CTAATTTCCTCTAAA           TGGGCAGG AGATGA CCTGCCCA            TCCTTTCTCTGGTTT  79 37
HF553_RS05010 NONE
        pepP NONE
        ubiH 1011038 .. 1011092 +  -9.3  -3.30124   TAGGCCGGATAAGGC GTTTACGCCGCCATCCGGCAT CGTGTTCGTAAAA ATGCCGGATGGCGGCTTCGCC TTATCCGGCCTACGG  71 50
        ubiI 1012387 .. 1012413 +  -5.8   -3.8901   AACCCGTCACACTTT        GCTTTCCCGGC TATCGC GCCGGG-GGGC         TTTCCTCGTTTGAAA  63 71
        gcvT 1013867 .. 1013887 +  -8.9  -2.84946   AAACCTGTTTTTGTG            CGTAACGGC AAA GCCGTCGCG            TGATTCATCCTTTTT  67 2
        gcvH 1014352 .. 1014367 +  -5.4  -3.41359   GCCTACTCACTGCAA              CGCGAA TTAT TTTGCG               TATTCGTTTTCGCAC  56 72
        gcvP 1017367 .. 1017380 +  -9.5  -4.24123   CGACTGTTTTCTAAA               GGCGC TTCG GCGCC                TTTTCAGCTTGTTAA  84 51
HF553_RS05045 1019003 .. 1019014 +  -4.4  -3.94823   TCGGTAGTCGTCGTT                GATG CTGC CATC                 TTCTTCTACTTTGTC  60 337
HF553_RS05055 1020778 .. 1020788 +  -5.4  -3.86897   AGAGGTGCAGTTCAT                 CGTT ATG AACG                 TTTCTCCGGAGTAAG  63 161
HF553_RS05060 1021481 .. 1021513 +  -8.4  -2.72471   TTCCCGGATGCCGGT     GCCGGATGGCG-GCG CTGT CGCACCTTATCCGGC      CTTGTATCCTGAACA  64 41
HF553_RS05065 1022736 .. 1022778 +  -9.9  -4.16279   GTAGCTACGAGAACA GCACGTGCGAGCCTGATGGCG TTG CGCTATCAGGCTATC-CG-GC TTTTAACGTGATATC  84 52
        sdhE NONE
HF553_RS05080 1024745 .. 1024766 +  -2.2  -4.15044   AGGCTTCAGGCGTAG           TGTTCGGC CATTTC GCCGAGAA            TTTGTTCACACCAGG  55 88
        xerD NONE
        dsbC NONE
        recJ 1028778 .. 1028803 +  -9.1  -3.30903   TTCGCTGTAATTAAG         GGGCGAAAT CCGCTAAT ATTTCGCCC          TTATAACCGCATTTT  71 62
        prfB NONE
        lysS 1031481 .. 1031511 + -17.7  -3.18366   AAATAAGATGTAAAT      TGCCGGATGG-GGC ATTA GCCGCCATCCGGCA       TCTCTTCGTTCAGGC 100 35
HF553_RS05120 NONE
HF553_RS05125 1033565 .. 1033592 +  -4.1  -5.12617   GTCCAGCCCGTCAAG        CGGGGAGTAGA CACCGA TATAATCCCCG         TTTTTTAGGTGGTTC  77 321
        vapB NONE
        vapC 1035744 .. 1035764 + -11.9  -5.86965   TTCTGACATGTTTAC            GAAGGGAGT ACC GCTCCCTTC            TTTTTTTTCCTGGAT 100 235
HF553_RS05150 NONE
HF553_RS05155 1038044 .. 1038060 +  -5.1   -5.4593   TTACGATCATAATCA              TCGATCG TAT CGATCTA              TTTTTATTGTTTTAA  87 516
HF553_RS05160 1038889 .. 1038914 +  -4.7  -4.60797   TAACGACAGGGAGAA         GCCGTCC ACGGAGGGGTTC GGACGGC          TTTTATATCTGACCA  71 55
        stdB NONE
HF553_RS05170 NONE
HF553_RS05175 NONE
HF553_RS05180 NONE
HF553_RS05185 1044828 .. 1044845 +  -4.9  -2.93747   GAGTAAAATACAGAA             TTCAGGCG GGA CGC-TGAA             TGTATGGCCTTTCAT  50 126
        rcnR 1046225 .. 1046248 + -12.5  -3.88396   GATTCTTATATAAAA          TAGCCGGGA GTTATA TCCCGGCTA           TCTTTTACTTTAGCC 100 23
HF553_RS05210 1049086 .. 1049099 +  -2.4  -5.41143   AGCGTCATTTCCTTT               GTGA TAAAAC TCAC                TTTTTTTAAACAATC  77 60
HF553_RS05215 1050570 .. 1050606 + -12.3  -4.12188   AACCGCATACAGCAT    CTGGCGCGCATGTCTGA AAA TCAGACAAGTGCGTAAG    TTTTAGCGCTGATCG 100 243
        kduI 1051627 .. 1051638 +  -3.6  -2.87344   GCGCTAGTCGCGACC                GGTG ATAA CGCC                 TGTGTGACAGGCATG  44 34
        kduD 1052496 .. 1052513 +    -7  -5.69473   AAAAAACTGATAAAG             CCCTGT CCTCGT ACAGGG              TTTTTTTATGATCTC 100 87
        araE NONE
HF553_RS05235 1055445 .. 1055455 +  -4.6  -3.71848   ATTTAGCGTTAGTAA                 CTCG GTG CGGG                 TTGTTCCTGCCGGGG  55 447
        lysA 1057559 .. 1057594 +  -9.7  -2.86164   GCGGGATGCGTAATC   CGGC-CTG-GCGCAGCG CTTT TGCCGCGCCCAGCGCCG    TGTCATCATTACAGG  65 274
         aas NONE
        lplT 1063629 .. 1063639 +  -2.4  -4.62302   GCGATATCGACGTAG                 GCGG CAA CGGC                 TTTTTGCGCCTGTTC  65 326
        rppH NONE
        ptsP 1070238 .. 1070262 +  -9.2  -3.37354   TTATTCGCACCTTTG          GAGCGTCTGC AACGC GCAGGCGCGC          TTATCAATCGCTATC  71 167
         lgt NONE
        thyA 1072010 .. 1072029 +  -7.1  -5.81032   ACGATCCTGCCATAA            CCGACGT CATTGC GCGTCGG             TTTTTTTTACCCTTC 100 47
HF553_RS05310 1072627 .. 1072654 +    -4  -3.37796   GTGAGCGTAACGAGG        CCGCCACGTG TCAATAAC CACGCGGGGG         TTCTCGCTACTGGAG  50 9
HF553_RS05315 NONE
HF553_RS05320 NONE
HF553_RS05325 NONE
        recC NONE
        ptrA NONE
        recB NONE
        recD 1085751 .. 1085763 +  -9.1  -3.30124   TTCTCGCCGGATGGC                GACGC GTA GCGTC                TTATCCGGCCTCCAA  71 47
        amiC 1088734 .. 1088747 +  -8.1  -3.41636   ACAGATACAAAAAAA               CACCC GTAA GGGTG                TTCATTAAGTTGGTT  65 111
        mltA 1090316 .. 1090334 + -10.3  -5.88565   AAAATAGTGAGCAGG             GGTGAGG AATAA CCTCACC             TTTTTTTATTCTGAG 100 96
        tcdA 1091593 .. 1091615 +  -2.9   -2.9348   ATAATGTTTCAATCG          TTATCGATGT CATC ACATC-ATAA           TGTATAAACTTTCGC  42 457
HF553_RS05395 1094490 .. 1094509 + -10.7  -2.57423   GTTATACAAAAAAAA            GCACCGC AATATG GCGGTGC             TACATTAATCACTAT  74 47
        gcvA NONE
HF553_RS05405 NONE
        rlmM 1097244 .. 1097288 + -16.6  -3.30771   ACGAGCGATAAAAAC GCGCTGCCGTCATCCGGCGC GTCATCA GCGCCGGATGGC-GCA-CGC TTATCCGGCCTATGA 100 30
        fucA NONE
        fucO 1105669 .. 1105681 +  -4.9  -3.95073   CAATATCGCGGCAGA                GAAAT GCC ATTTC                TTTATGCGTCTCAAG  60 194
         syd 1112869 .. 1112880 +    -3  -2.95093   AATGTTTTTGCGCAC                TTTC ATAT GAAA                 ATTTACTTAAGGTAT  42 157
        truC NONE
HF553_RS05490 1115241 .. 1115253 +  -3.3  -5.01535   TGTTGCACGGTGAGT                GTGTG TGG CGCGC                TTTTTATACTTCTCC  76 339
        gudP 1116744 .. 1116755 +  -4.4  -2.64099   TATTGAACTGAAACC                TGTC GCAG GACA                 ATTATCATGACAACG  46 4
HF553_RS05505 NONE
        gudD 1119471 .. 1119490 + -13.6  -2.90061   TGCGTTAAGTCAGAG            CCGGTTCC GTAA GGAACCGG             TCCTTCTCTGGGTGT  87 33
HF553_RS05515 1121092 .. 1121128 +    -5  -3.85698   TAAACTCAGCCGGTT   CC-GGCGCCATCAGACGC GCT GCTAC-GTTGGCGCCAGG   TTTATAGCGCAGCAA  61 434
        rlmD 1124843 .. 1124869 + -10.9  -2.52464   CGCATGTAATGATTA        CC-GGCTTACCG ACTT CGGTAGGCCTGG         TCCCTTAAGGAGAGG  74 32
        relA 1127180 .. 1127209 +    -3  -4.63184   CAAAGCCGCATTAGC       CA-ACCCCATA AGCATGATA TATGGGGTATG       TTTTTGACGTACATT  65 83
HF553_RS05535 NONE
HF553_RS05540 1128007 .. 1128017 +  -6.8  -3.44257   CATCATTAATTCTTT                 TCGC CCT GCGA                 TTCTGGATCTGTTTT  62 207
        mazG 1138075 .. 1138085 +  -4.6  -2.88788   CGTCAAAAACATTTA                 CCTC AAA GGGG                 CTATTTTCTCCCTCC  48 100
        pyrG 1139880 .. 1139903 + -13.9  -4.08164   AAAAAGTTAGAACGG          CGGTGCACC CTCAGC GGTGCACCG           TTTGTCTGAAGTTTT 100 40
         eno 1141274 .. 1141287 +  -9.5  -5.77988   CTCTTAACGTAAAAA               CCCGC TTCG GCGGG                TTTTTTTGTATCTGT 100 53
        queE 1142067 .. 1142096 +  -9.3  -2.65656   GATGCTCTATCAATT       TTACGGACGGCCT GCCG ATGCCGTCTGTGA        CTTATCCATTACCTT  66 39
HF553_RS05605 1144488 .. 1144503 +  -5.4  -3.36492   CATAAACGAGTGTCC              GTGCAGG CGG CC-GCAC              TTATGCCCTTCAGGC  53 386
        cysJ NONE
        cysI 1148520 .. 1148531 +  -3.6  -2.99471   GGGAATAACCTGAAT                TGCC GGAT GGCG                 TCTGTGTAGGCCTGA  45 33
        cysH 1149364 .. 1149380 +  -9.4  -4.32804   TGCTGTTATGAAAAA              TCCGGC AGGCA GCCGGA              TTTTAAATTGGTTAT  86 67
        casA NONE
        casB NONE
       cas7e NONE
       cas5e 1157760 .. 1157781 +  -3.1  -2.75074   AATGGGCCGTTGCAG           GAGAGA-ACA TAA TGTATCTTTC           TCGTATTCAACTCCG  43 14
       cas6e NONE
       cas1e NONE
        cas2 1159828 .. 1159866 +  -8.1  -3.57783   TGTGACGGTCGCCGT  CTGGTTGTGT-TCCCCGC GCCA GCGGGGATAAACCGCCGG   TTGTCCTTGTAATGG  69 165
        cysD NONE
        cysN NONE
        cysC 1164863 .. 1164880 +  -9.8  -2.79831   GATCCTGAGACACCA             CCGGGC TTGTAT GCCCGG              TATGGTCAAGGTTAC  69 33
HF553_RS05695 1165314 .. 1165340 + -13.8  -2.57344   CGGGTATACGTAACA         TCCGGCAAATGT GGT ACATTTGCCGGC         GTTGTCGCGGCAATC  86 110
        ftsB NONE
        ispD NONE
        ispF NONE
        truD NONE
        surE NONE
HF553_RS05725 1169438 .. 1169461 +  -6.8  -3.21912   TGGGTTAAGCGTATC          GTGAACAC ATTTTCCC GTGTTCAC           TTAATGCGTTGCACG  59 116
        nlpD 1170703 .. 1170715 +  -3.3  -3.35996   CGTCAAGGGATCACG                GGTAG GAG CCACC                TTATGAGTCAGAATA  48 73
        rpoS 1171717 .. 1171760 + -14.8  -4.27117   CGCGAGTAAGTACCC TTGTCAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTTACCG TTTGTCTTCTGCCAG 100 32
HF553_RS05755 1174598 .. 1174611 +  -9.5  -4.18668   AAGATGATGACGTAA               GCGGC TTGC GCCGC                TTTGCTATTTTTTGG  84 26
HF553_RS05765 1176478 .. 1176491 +  -2.3  -2.74999   CTCTGCCTGGCGTTA               CGCCT GAGG AGTCG                TCATGTTAAAAATTG  40 3
HF553_RS05770 NONE
HF553_RS05775 NONE
HF553_RS05780 NONE
HF553_RS05785 NONE
HF553_RS05790 1181828 .. 1181838 +  -2.4  -2.55074   GGGGAAAATGATAGT                 CGGG TAA CACG                 TGAATTAACGTTCCA  38 198
HF553_RS05800 NONE
HF553_RS05805 1184317 .. 1184356 + -17.2   -3.5394   AAAAGCCTGTGCTGG  CGCGT-GGGCCCGATAACG CGG CGCTATCGGGCCCGACACG  TTTACACCAGACTTT 100 40
HF553_RS05815 1187909 .. 1187929 + -10.5  -3.25823   GTGGTTGGTCTTCGG            TGAGAGGCA GGA TGTCTCTCA            TTAATCTCCGGGAGC  74 440
HF553_RS05825 NONE
HF553_RS05830 1189266 .. 1189278 +  -2.6  -4.03885   CGGGTAACTACCTGC                GTCG GATTA CGGC                TTCGTTTTTTTGGCC  56 34
HF553_RS05860 1192919 .. 1192934 +  -6.2  -3.63569   CCAGCTTTCGCTGAT              TCAGAA AACA TTCTGA               TTGTTAAAGGCTTAC  60 332
        invF NONE
        invG NONE
        invE NONE
        invA NONE
        spaK 1200953 .. 1200968 +  -3.2  -2.85078   TAGTCGGTCGCTAAT              GAGATG AAAA CACCTC               GTTTACTGCAATATC  44 19
HF553_RS05905 NONE
        spaM NONE
        spaN 1203673 .. 1203687 +  -2.1  -3.12351   ATCTGGCGAGGAGGA               TGACG CCTGA TGTCA               TTGCGTGTGAGACAG  42 16
        spaO NONE
        spaP NONE
        spaQ 1205538 .. 1205557 +  -3.6  -2.76037   CTGGCGTTGGCTAAG            GGGTAAAA AATG TTTTACGC             GTTGTACTTTGAAAT  43 20
        spaR NONE
        spaS 1207451 .. 1207461 +  -2.4    -3.767   TGAATGTTCACTAAC                 CACC GTC GGGG                 TTTAATAACTGCATC  51 81
        sicA NONE
        sipB NONE
        sipC 1211081 .. 1211137 +  -7.9  -3.34806   GCTTAATCTGAAAGG TCATCTATACGCCATCATGGGTGTGAT TTA ATCGCGCTCCTGATGGCGAACTGGGGA TATTATGCTTAATAT  65 35
        sipD NONE
        sipA 1214230 .. 1214244 +  -2.1  -2.60075   TTACTACCGTTGATG              GCTTGC ACAT GCA-GC               GTTAATTAACCGGGA  39 6
HF553_RS05970 NONE
HF553_RS05975 1214813 .. 1214824 +    -3  -2.90075   AATTTGAAGAAGCAA                TCTT ATAA AAGA                 TATAATTCAAGAGGA  42 18
        sicP NONE
        sptP 1216866 .. 1216899 + -14.9  -4.18019   AAGCTGATAAAAACA     TAGCTTACTTTTAGA ACTA TCTGAAAGTAAGCTA      TTTCTGTATAATTAT 100 34
        prgH NONE
        prgI NONE
        prgJ NONE
        prgK NONE
        orgA NONE
        orgB NONE
HF553_RS06035 1225592 .. 1225605 +  -2.3  -3.17982   AAAGAGGCAATTGAC               TGGTG AACC CCCCA                TTGCTGGCGATTTGT  44 20
        sirC 1226828 .. 1226842 +  -2.2  -4.15106   CGTACGATGAACCAT               TGATTT GTG AAATTA               TTTTAAACGTTACTA  55 23
HF553_RS06045 1228049 .. 1228065 +  -3.7  -3.44319   GGATATTACAGATCT              TGTGAGT AAT AATCACA              TTATGCTGGGTTAGC  52 104
HF553_RS06070 1232342 .. 1232352 +  -2.4  -4.25104   TTAAGCCCCAGACGC                 TGCG CCG CGCC                 TTTTGGTCCAGCCAC  60 163
        hycA 1238947 .. 1238977 +    -9  -3.65542   TGTTGCCCGCTTTGA       TTCTCGATATGGCG TTG CGCCATGTCATGAA       TGTTTTGGGGATGGG  75 49
        hycB NONE
        hycC NONE
HF553_RS06120 1242408 .. 1242426 +  -3.7  -2.90992   TGCGTTTTTAGCCTT             CGTCTCC TTGCT GGCGGCG             TGATTTAAGAGAGTT  46 4
        hycE NONE
        hycF NONE
        hycG NONE
HF553_RS06140 NONE
        hycI NONE
HF553_RS06150 1247247 .. 1247259 +  -7.7  -3.31144   CACTGGCGACATTAC                GTGTC ATC GACAC                TTGTGACGATGACAC  65 91
        hydN 1247975 .. 1247986 +  -5.8  -3.34962   GCATTGCCGGATGGC                GGCA TCAA TGCC                 TTATCCGGTCTACGG  56 73
        hypF 1250324 .. 1250335 +  -7.2  -3.30771   TGTAGGGCACCGGAT                GGCG GCTG CGCC                 TTATCCGGCCTGTAA  63 36
        norR 1254726 .. 1254739 +  -2.3  -4.25283   GCAGGTTAATGGCGC               CGGTG AGTT TGCCG                TTTTCATCGACCACT  60 66
        mltB 1261084 .. 1261108 + -10.8   -3.3287   GCGCTAATTTACGCT         TAG-GGAGGGG AGCC CCCCTCCGCTA          TTACTATGGCTTTTT  80 34
        pncC 1262050 .. 1262069 +    -8  -2.84098   CTACAAAACACTTGA            TACTGTAT GAGC ATACAGTA             TAATTGCTTCAACAG  61 26
        recA 1263262 .. 1263281 + -11.4  -4.24002   TTAAATTACCATCAA            GGGCTGCA TTTA TGCGGCCC             TTTTGGCATTTACCC  93 92
        recX 1263867 .. 1263913 +  -2.9  -3.25652   CTTATTCCCACTTTT TCCGTC-TGGACGCGGGTTGCT TAAC GGCGAACAGCGTCTGCGACGAA TATTCCTTAAATACA  45 80
        alaS 1266696 .. 1266717 + -17.3   -3.6502   ATAAGCGTTCGTTGG           CGCCGCAGC CCAT GCTGCGGCG            TTTACGTCAACGCTA 100 43
        csrA 1267124 .. 1267138 +  -4.2  -3.35679   TCTCACTTTTCGGGT               GAGACG CAG CCTCTC               TTCTCGCTCGCCCGC  50 51
HF553_RS06245 NONE
HF553_RS06250 1267566 .. 1267576 +  -5.4  -3.27029   GTTCGAATCCTCCCG                 GATG CAC CATC                 TCTTACTTGATACGG  54 17
HF553_RS06255 1267704 .. 1267714 +  -5.4  -3.27029   GTTCGAATCCTCCCG                 GATG CAC CATC                 TCTTACTTGATACGG  54 17
HF553_RS06260 1267977 .. 1267987 +  -5.4  -3.27029   CGAGTAATCCTCCCG                 GATG CAC CATC                 TCTTACTTGATACGG  54 151
HF553_RS06265 NONE
        yqaB NONE
HF553_RS06275 1269367 .. 1269384 +  -3.5  -2.76171   ATTGTAGGTTTGGCA             TGT-ATGG CCG CCATTACA             GTTATGCTTATTAAA  43 43
        gshA 1271083 .. 1271099 +  -2.2  -4.85782   TACTCAGACTCGCCC              CGGAAC AAAGA GTTCAG              TTTATTTTTAAAAAA  66 126
        luxS 1271682 .. 1271700 + -13.8   -5.5604   CAGTATTTAAATTAA             CCCCGGTC TAT GGCCGGGG             TTTTTTATTGCTTAA 100 60
HF553_RS06290 1273383 .. 1273398 +    -9  -4.41206   TGGTCTACTAAAAAA              GGGATC CGCA GATCCC               TTTTATCAGATAGTT  85 45
HF553_RS06355 1288311 .. 1288322 +  -7.2  -3.16564   CGATAAAAATCCCTA                CCGC TGCG GCGG                 TTCCTACGCTACACC  59 150
HF553_RS06365 1289110 .. 1289137 +   -12   -3.2496   AAAAAAGCGACTAAA        AG-CGCGACTGGC AAT GCCAGTCGCGACG        TTAACTTATGCCTTA  83 27
        stpA 1290834 .. 1290844 +    -4  -4.57073   GTGACATCTGCCGCT                 TTGA GGA TCAA                 TTTTTCGCCCGGCTC  69 167
HF553_RS06395 1292231 .. 1292248 + -14.1  -3.31263   AATTACCGGCCACCG             GCGGCGC ATAA GCGCCGC              TTATCAGGATAACCT 100 39
        lysM 1292829 .. 1292848 + -13.6  -2.62192   GAATAATGGGAATCG            GCGTCAGC AAAT GCTGACGC             ATTAATTCGCTGGCG  78 88
        tctD NONE
HF553_RS06455 1305599 .. 1305620 +  -2.9   -4.2717   AGCACGTTTACAAAA           AGTCGCATC TTGA GGTGTGACG            TTTTAATCAAATGAT  58 65
HF553_RS06460 1306727 .. 1306757 +  -9.8  -2.59876   TCTGTAAAAATAGCA       TTTCGGCAGTGGTG TCA TATCATTGCCGAAG       CATTTTATCTCCTGA  68 47
       pipB2 NONE
HF553_RS06480 1311634 .. 1311670 + -17.5  -4.07687   TGATGGTTTTCTGTC    TGCAAAGCGCCTGATAA ATA TTACCAGGCGCTTTGTA    TTTTGGAGCCAACAT 100 38
HF553_RS06485 1314332 .. 1314354 + -17.8  -3.29043   CTCGTTTTGATGGGT           TATGCCCGCC GCT GGCGGGCATA           TTCTGGCGACGGGTT 100 31
HF553_RS06515 1324704 .. 1324721 +  -9.8  -4.99134   ATTTCGTTTTATTCA             GCCCCG TGAATT CGGGGC              TTTTTCATTTAGCAT  93 44
        fljA 1325536 .. 1325549 +  -3.1  -3.42548   GCAGTTGCACTATTG               TCGTC TGGT GATGA                TTACTCTTCATTCAT  50 269
HF553_RS06530 NONE
HF553_RS06535 1328774 .. 1328786 +  -4.1  -4.12902   GTCAATTCTCTTGTC                TGCCT TAG AGGTA                TTTTCAGAATGATTA  59 1
HF553_RS06540 NONE
HF553_RS06545 NONE
HF553_RS06550 NONE
HF553_RS06590 1350991 .. 1351010 +  -5.8  -3.51825   GTTCGCGCCAAAGAG            GTTTA-CCG TGC CGGATAAAC            TTGTGGTTGAAGTGG  57 8
HF553_RS06595 1351276 .. 1351294 +  -3.1  -3.64716   GCGCGCCGAAAAATC             GGCTGGT AGATA ATTAGCC             TCTTTTGCCGGATAA  51 13
        grpE 1355289 .. 1355309 +    -9  -5.53288   GAAGTAAAAGTCTGA            TGGCCGAT GTAAA GTCGGCCA            TTTTTTTAGCTTAAA 100 34
         ffh 1359925 .. 1359952 + -13.4  -4.43307   GCTTTTAATATGACG        CCGGGCTCCGTT CCTC GATGGGGCCCGG         TTGTTTTATTCACAC 100 285
        rpsP NONE
        rimM 1360776 .. 1360786 +  -2.4  -3.33744   TACTATCGAAGTAGA                 CTGG GAT CCTG                 GTTTTTAAACCACCG  45 7
        trmD NONE
        rplS 1362035 .. 1362057 + -10.5  -5.26316   GCTTGTAGAAAAGAA           GGGGCTGGC ATTAC GCTGGCCCC           TTTTTTATGGGGTGC 100 66
        aroF 1365387 .. 1365403 +  -2.3  -2.52933   TGGCGGTGCGCGTCG              CATAAGA GGT TGTTATG              GTTGCTGAATTGACC  39 21
        tyrA 1366543 .. 1366557 + -11.4  -5.37593   ACATCTATACTAAAA               GCCAGC TTT GCTGGC               TTTTTTCGTTTAAGG 100 46
HF553_RS06680 1367863 .. 1367889 +  -5.7  -4.67353   GCTGCCGAGCGCCGC        GACGCGC-GGAG AGTT CGCCTGCGCGAC         TTTTTCCATCGCTGC  75 400
HF553_RS06705 1370716 .. 1370732 +  -5.3  -3.10498   AACAACAAGCCATAA              TAAAAAA TAA TTTTTTA              ATTTATTCGGGATTC  51 16
HF553_RS06710 NONE
HF553_RS06715 NONE
HF553_RS06720 1371872 .. 1371882 +  -2.6  -3.50537   CGATATAACAAACAG                 TATA AAA TATA                 ATTTTTGCCTTTCTT  48 14
HF553_RS06725 1374584 .. 1374601 + -12.7  -2.50074   GAGAGAAATAAAAAA             GGCACCG TGTG CGGTGCC              ATGTGTTATGCGGCC  81 30
HF553_RS06745 NONE
HF553_RS06750 NONE
HF553_RS06755 NONE
HF553_RS06760 NONE
HF553_RS06765 NONE
HF553_RS06770 NONE
HF553_RS06775 NONE
HF553_RS06780 1383835 .. 1383849 +  -2.1  -3.05384   ATCTGGAAGCGGAGG              CCACGG AAAA CC-TGG               TTGGATAAGGGGCAG  42 3
HF553_RS06785 NONE
HF553_RS06790 1384499 .. 1384511 +  -4.8  -2.78596   GAACATGACGGGGTT                CGCT GATGG AGCG                TGTGGTGGCGGGCTG  49 20
HF553_RS06795 1384909 .. 1384946 +  -2.8  -2.79023   ACTGACACTTTATCT  G-GAGTTAT-ACGGGCAG TGTG CTGCACGTCATAACACGC   TGGTTGATGAAATTA  41 98
HF553_RS06800 1385387 .. 1385412 +    -4  -2.76261   GAAAATACGCGCATA         GCGGTTGCTAA CGGAA TAAGCA-CCGC         ATTTAAAGGTTCAGG  45 172
HF553_RS06805 NONE
HF553_RS06810 NONE
HF553_RS06815 NONE
HF553_RS06820 NONE
HF553_RS06825 NONE
HF553_RS06830 1392023 .. 1392048 +  -2.5  -3.09028   GACTGGCCGGAGGTA         CCGGATGTG GCGTGAAG CGCGTCTGG          CTTTTACGGATTCTC  43 11
HF553_RS06835 NONE
HF553_RS06840 1393248 .. 1393258 +  -6.8  -2.86944   CAGGGTGCTGAAGCC                 CGTC AAT GACG                 CTTTGGGTTAATGAT  56 4
HF553_RS06845 1394986 .. 1395002 +  -7.9  -5.24531   GATTCTCTCTTTTCA              GCCCGCA TAA TGCTGGC              TTTTTTATCCCCACT  91 39
        rluD NONE
        pgeF 1399810 .. 1399824 +  -5.7  -3.83998   TTCACCTTGAATAAT               TGAGG GATGA CCTCA               TTTAATCTCCAGTAG  61 98
        clpB 1402460 .. 1402477 + -10.5  -5.27335   CAAATTTGAATAAAA             CGGGCCC TGAC GGGCTCG              TTTTTGTTTAAAAAC 100 45
HF553_RS06880 1404458 .. 1404471 +  -2.3  -2.72471   AAGAACTGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 36
HF553_RS06885 1404719 .. 1404754 +  -9.2  -4.00532   AGGCGTTGCCATCAG    TATCTCAAAACTGACT TACG AGTCACGTTTGAGATA     TTTGCTCTTTAAAAA  79 61
HF553_RS06890 NONE
         rrf 1408277 .. 1408308 + -13.8   -5.1634   AGGCATCAAATTAAG      CAAACGGCTCAGTC GAAA GACTGGGCCTTTTG       TTTTTGTCTGTTTCT 100 37
HF553_RS06900 NONE
HF553_RS06905 1410474 .. 1410500 +  -6.6  -3.19463   TCAAAGAAAACATCA        GCCCT-ATCGC TGCGCT GCGGTCAGGGC         TTACTCCCTGGTGAC  56 165
HF553_RS06935 1417364 .. 1417377 +  -9.5  -2.57344   CGCCCGGTCAGACAA               GGCGC TTTC GCGCC                GTTATCCGGGCGATA  68 93
        grcA 1418824 .. 1418848 + -16.5  -5.34857   ATCCGGTAATAACAA          GCGGAAGAGGC CGG GCCTTTTCCGC          TTTTGTTTTATTTGG 100 46
HF553_RS06955 1420444 .. 1420465 + -14.5  -4.03167   TGGAAGATAAAAAAA           TGCCGGGTT AACG AACCCGGCA            TTATTATTACTCTTC 100 15
        trmN 1422742 .. 1422754 +  -3.3  -3.36991   ATCCAGCGTAAAGTG                CAGCC CCC GGCTC                TCTTTACGCATCATC  47 94
        rseD NONE
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 1427457 .. 1427467 +  -4.6  -3.63744   AAGCATTCGCTTTTC                 CTGC GTT GCGG                 TGTTTTACAGGAAAA  55 88
        lepA 1429461 .. 1429473 +  -3.4  -3.64609   TCCCTAAGGAGTTGG                CATG GCGAA CATG                TTTGCCCTGATTCTG  51 41
        lepB 1430454 .. 1430486 + -13.6    -4.015   GTGACGAAATGATCG     TTTACGCTGCCGTCT TTTT AG-CGGCAGCGTGAA      TTATTTCCTGGATAA 100 43
         rnc NONE
         era NONE
        recO NONE
        pdxJ NONE
HF553_RS07030 1434584 .. 1434609 +  -3.3  -4.39329   ACGCCTATTTTCTGC         TCGG-GCCAG CTCTTTT CTGGCGCTGA         TTTGTTATCTACCGT  62 454
HF553_RS07045 NONE
HF553_RS07050 1437749 .. 1437777 + -15.4  -3.55203   GCGCAATAAACTTGA        TGGCTCTTCTGC ATGAG GCGGAAGAGCCA        TTTCAAACCAGTTTT 100 32
        murQ NONE
HF553_RS07065 NONE
        yfhb 1441652 .. 1441664 +  -3.3  -3.02471   CAGCTCGAATAGTGA                AACGC ATA GCGTC                TGTGTATAATGCCGC  45 29
        tadA 1442546 .. 1442556 +  -3.2  -4.74103   CCGTAGGTTAGCTTA                 CTGT AAT ACGG                 TTTTTGGCTTAACAG  70 347
        purL 1447982 .. 1448000 + -11.7  -5.24129   CCCGATAGCCATTAA             GCCCCTC TTCAC GAGGGGC             TTTTTTGTAGACGGC 100 45
        qseE NONE
        qseG NONE
        glrR NONE
        glnB 1453057 .. 1453068 +  -5.8  -3.36991   CAGACGCGCAGCACC                GAGC GGGC GCTC                 TCTTTCGGGCTGCTC  56 525
HF553_RS07135 1461031 .. 1461058 +  -6.9  -5.01732   GAACGGGGAGGAAAA        CGGGCGTTCGC CTTAAC GATAACGCCCG         TTTTTTCAGAGGATT  82 91
HF553_RS07145 1463915 .. 1463953 + -12.5  -3.69621   ACTTATGCGCCATAA  CG-TGACGCCGCCGGA AGTCATTA TCCGGCGGCGTTGCCG   TTTGAACTTCTCCCT  95 90
HF553_RS07150 1465308 .. 1465320 +  -4.7  -4.57073   TCAGCGCTACGCCGC                GCGGG CAT CCCTC                TTTTTGAAACGCCTG  71 148
HF553_RS07160 NONE
HF553_RS07165 1468463 .. 1468475 +  -9.1  -4.77438   GAGGAAGAGCTTGCC                GACGC GCG GCGTC                TTTTTACTGGTGCGT  93 290
        trmJ 1473974 .. 1473997 +    -3  -3.86015   CGGATGGCGCTTCGC          TTATCCGGCC TACA GGCCGCACGA           TTTGTAGGCCGGATA  52 53
        iscR 1474828 .. 1474851 +  -2.4  -2.72144   AGCCGGTTGCCTGAT          TCCTTGCATT GAGT GATGTACGGA           GTTTAAGAGCAATGA  40 171
        iscS NONE
        iscU NONE
        iscA 1476981 .. 1477007 +  -8.7  -4.30719   AGTAAGAAGGTATAA        CCCCAC-CGTGG TCGC CTGCGTGTGGGG         TTTGTTCTGACAGGC  84 163
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 1479976 .. 1479997 + -15.1  -3.78775   GAGTAAGTCAAATAA           CGGGCTGCC CTAC GGCGGCCCG            TTTGCTAATAAGGAA 100 35
        pepB 1481319 .. 1481344 + -11.1  -3.12395   ACGGTGTTTTTGTAG         GCCGGGTAAGCG AAG CGCC-ACCCGGC         ATTTTGCCTGATGAC  76 41
        sseB 1482639 .. 1482654 + -10.4    -5.626   ACCAGCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGGCCTG 100 478
HF553_RS07260 NONE
        pbpC 1491949 .. 1491963 +  -4.4   -2.5409   GTCAGGTTGCAGCGG               TTAATT TTG AATTAA               TACGTTAACCATTCT  46 3
HF553_RS07270 NONE
        dmsB NONE
HF553_RS07280 NONE
HF553_RS07285 1496821 .. 1496831 +  -2.6  -3.09878   CTAATGCTCATTTTA                 TTTT AAA AAAA                 TGTTACCTGCATCCA  43 50
         ndk 1497465 .. 1497497 +  -4.1  -5.04249   ATTTGTACAATGCAG     CGCCCCCGGACGAGC AGTAA GCTTA-CC-GGGGCG     TTTCTTTTTTCAACC  76 142
   trmG/rlmN 1498894 .. 1498904 +  -6.8  -3.50045   GTTTTGTCATCTGCG                 GCCT GAC AGGC                 TTATACTGTCTGACT  62 198
        rodZ NONE
        ispG 1501171 .. 1501191 + -13.3  -3.00298   AAAATAAGAACGTGA            TGGGAAGCG GCG CGCTTCCCG            TGTATGATTGAACCC  86 34
        hisS NONE
HF553_RS07315 NONE
        bamB 1504397 .. 1504417 + -11.1  -4.60746   GTGCGTTTTAAAAAA            CGGCTCCTG GTG TAGGGGCCG            TTTTCCTGTTTTTAA  95 52
         der 1505983 .. 1506010 +   -15  -3.59979   TTCAGTAATATTCCA        GGCCTGATAAGCG CAG CGCT-ATCAGGCC        TTTCAAGTAAAAGCG 100 47
HF553_RS07330 1506282 .. 1506314 +  -7.7  -3.31144   AATAAAACCGCTGTC     GACGTT-GCGCCGC AGAGCA GAGGCGCCGACGTC      TTATCCGGCTAAGGG  65 36
        sinH 1508812 .. 1508842 +  -6.9  -3.04398   TAGTCAGAAATAGCG      TCAGCGTTGTGGCT GACC AGCCA-GCCGCTGA       ATTTTGAGAAAAAGG  58 28
HF553_RS07340 1509843 .. 1509866 + -15.4   -4.0896   AAGTTGTCCTCAACA          TACCACTCCC CGCG GGGAGTGGTA           TTTTCCGCGCACTTT 100 39
HF553_RS07345 1515541 .. 1515554 +  -3.1  -3.33922   TCGTTGGTACCGGTA               GTGAA ACGT TTCGC                ATTTTTACCGCCGAT  48 68
HF553_RS07350 1523219 .. 1523230 +    -3  -3.30441   TATTTATTAAATAGG                TGAA GATA TTCA                 TATTAATTATAAATT  46 321
HF553_RS07360 1528765 .. 1528787 + -12.7  -4.24948   GTAAGTTAGACAAAA          CCGGGC-GGG TATT CCCAGCCCGG           TTTTGAGTCTAATGA 100 37
        guaB 1531898 .. 1531921 + -13.9  -4.56113   GGCTCCTGATTTTCT          TCGCCCGAC CTTCGC GTCGGGCGA           TTTATTTAATCTGTT 100 32
        guaA 1533587 .. 1533606 +   -10  -5.42975   TAAAAGTGAATTTAA            CCCTCTGT TTTT GCAGAGGG             TTTTTATTTATGTGC 100 74
HF553_RS07405 1537073 .. 1537084 +  -4.4  -2.90797   TTTAATAATTACAAT                CGAT GACT ATCG                 TGTGATGTATATCGC  48 20
HF553_RS07410 1539396 .. 1539410 + -12.8  -2.79312   TTCAGTAAAGGCAGA               CGCCGC AGC GCGGCG               TCTGATCCACAATTT  82 33
         upp 1545959 .. 1545977 +   -11  -5.81412   AATAAATAATTAAAA             GCCGACTT TAA GAGTCGGC             TTTTTTTTGAATAAA 100 44
        uraA 1547325 .. 1547345 + -18.3  -3.58726   ATCAGTAACGGGTTG            CCGGGCAGC GAT GCTGCCCGG            TTCTATCTCACGGGA 100 33
         hda 1548116 .. 1548131 + -11.8  -3.60792   CCTGAAACTGTAATA              CGCCGC GACG GCGGCG               TTTAACGGTTAACCG  89 28
HF553_RS07460 1551386 .. 1551405 +  -9.3  -5.18726   CGCTCTTTTTTTTAA            TGCCGCA CCGTGT TGCGGCA             TTTTTATTGTCGGAA 100 134
HF553_RS07465 1552777 .. 1552805 +  -9.6  -2.89881   GCGGGTTTTTCCATA       CTGCGCGCTCCAT GTTA AAGGAG-GCGCAG        TATATGACGTCGATA  70 61
HF553_RS07470 NONE
HF553_RS07475 1555237 .. 1555265 +  -8.8  -3.10843   ACGGCGCATTCCCTT       TC-CAGGCCGCAC ATCA GCGCGGCCTGAGG        CTTTTACGCGTTTTC  66 40
        dapA NONE
        bamC 1558394 .. 1558413 + -11.4  -5.31275   ACAAGTAATTTAACA            GGGCTGGA GTAA TCCGGCCC             TTTTTTCTGATAAGA 100 33
        purC 1559287 .. 1559308 + -11.5  -2.90054   TAATTCCGCTTCTGA           CCGGGGGGC AACC GCTCTCCGG            TATCATCCTTTCCTC  78 38
HF553_RS07505 1560277 .. 1560288 +  -2.2  -2.64735   CTTTTGATAAACCGG                GGCA GGGA TGTC                 TGATATCGATGCGCT  39 34
        tmcA 1562291 .. 1562320 + -14.4    -2.508   CCCGGCGGTGGGGAC       CATGCCGGATAG CGATAC CTGTCCGGCATG        ATATTCGGTTACTTT  87 14
        ypfM 1564557 .. 1564577 +  -8.3  -5.24129   TAGGGGATAAGAAAA            GGCGACT CAACGAA AGTCGCC            TTTTTTGTGCCCGGC  95 51
        aegA 1571903 .. 1571915 +  -9.1   -3.5393   CGATAAACATTTTCC                CGTCG GGT CGACG                TTTAACAGGCCTGAT  73 165
        nudK 1574297 .. 1574308 +    -3  -3.53012   TGGACTGAAAAAAAA                GAAA TATA TTTC                 TTTACACAAAAAAGA  48 33
HF553_RS07560 1575438 .. 1575453 +  -5.4  -3.11955   CGGATGCCTGGCCTA              CGCTGTG GAT CAC-GCG              TTGAATCCTGGTTGT  52 6
HF553_RS07565 1575897 .. 1575907 +  -2.4  -4.87273   CCTTTGATGTTCAGC                 ACCC GGC GGGC                 TTTTTCTACAATATT  66 107
        maeB 1581422 .. 1581439 + -12.7  -5.60993   TTACTCTCTCTTCTG             GCGCAGG TTCT CCTGCGC              TTTTTTTATGCGCCG 100 48
        eutS 1582137 .. 1582151 +  -2.9  -3.15861   TTTACCCTGTGTGAG               TTAAC AAAAA GTTAA               TTGGTGGCGGTAATG  45 11
        eutP NONE
        eutQ NONE
        eutT NONE
         pta 1585125 .. 1585142 +  -2.6  -2.83403   CACTGGTTGAATGAA             CGGTCC CGTTCT GGACCC              CTTTAATGAGAGGAA  41 27
        eutM NONE
        eutN NONE
HF553_RS07620 1587251 .. 1587261 +  -6.8  -3.48924   ATGCGTGCTGGTGGA                 TGCG TTT CGCA                 TTGTATAAGGGATGA  62 7
        eutJ NONE
        eutG 1589363 .. 1589374 +  -5.8  -3.30124   GTTAATGCCGGAGGC                GACG TAAA CGTC                 TTATCCGGCCTACAA  56 92
        eutH NONE
        eutA 1592033 .. 1592050 +  -4.1  -2.58544   GAAATCACTCGCATT             TCCTTCC TGAG GGAACGA              CTTATGAAACTAAAG  44 16
        eutB NONE
        eutC NONE
        eutL NONE
        eutK NONE
        eutR 1596783 .. 1596795 +  -9.1  -3.30124   CCCATGCCGGATGGT                GACGC GTT GCGTC                TTATCCGGCCTACGA  71 202
HF553_RS07680 NONE
HF553_RS07685 NONE
HF553_RS07690 1600370 .. 1600387 + -11.3  -3.68359   AATAACCTCCATTAA             TGCCACG ACTG CGTGGCA              TTCTCATTTTCAGGA  87 81
        yfeX 1601411 .. 1601428 + -12.7  -5.48825   GCATGAAAATGCCCA             TCCCCGC CTCC GCGGGGA              TTTTTTTACCTAATA 100 128
        ucpA 1602348 .. 1602375 + -14.2  -3.84992   TCTGATTGATGCCGG        TCTCCTCCCCGCG CCG CGTGGGGAGG-GA        TTCTCTTATTCCCTT 100 36
        cysP NONE
        cysT NONE
        cysW NONE
        cysA 1606377 .. 1606404 +  -3.3  -5.08601   TATCGTGATTTTGTA        GGCCGGGTAAGC ACAGC GCC-ACCCGGCA        TTTTTATTGAGCTGA  74 99
        cysM 1607337 .. 1607363 +  -8.8  -3.19234   GGGCAGGGATTTAAA        CGAGGTGCCAT CGTCGT ATGGCACC-CG         TGTGTTATAGCGTTT  67 27
        pdxK NONE
HF553_RS07750 1611140 .. 1611157 + -12.7  -3.67597   CCTACAGGCAAAAAA             TGGCGCC CAAA GGCGCCA              TTCTTCACTGCGGCA  95 150
        zipA 1617499 .. 1617515 + -10.8  -5.38249   ACATTTTTAACGTAA              CCCCCG CCTGT CGGGGG              TTTTTTATCATTGAT 100 57
        ligA NONE
HF553_RS07790 1619926 .. 1619955 +  -4.1  -5.40072   ACGTCGGAAACAGAA       TATTGGCCATCGG GATC CCGTTGGCCAGGC        TTTTTTTCGAACCGC  86 177
HF553_RS07800 1621817 .. 1621842 +  -9.7  -3.06815   GTGTGAGGTGCGGTC         TTGCCCTGCCA TTTT TGACAGGGCAG          TGTGTTAAAACAGGT  71 57
        xapA 1623712 .. 1623726 +  -9.2  -4.03234   AACACAATGACTACG               GCCCCG TAT TGGGGC               TTTATCTCACGGCAA  80 40
HF553_RS07815 1625015 .. 1625044 +  -8.6  -4.82901   GCACATTAATTTTAT       TTGACTGGCGAG AGGATG TTCGCCAGTCCA        TTTTTATGAACAAGG  89 32
HF553_RS07820 1625219 .. 1625229 +    -4  -2.82933   CGTTAAATCTATTTT                 TTAC TAG GTAA                 TATGGTAAATTCCAG  45 19
HF553_RS07825 1626300 .. 1626314 +  -9.2  -5.17576   GCAGATAGCAAAAAA               GCGCCT TTA GGGCGC               TTTTTTACATTGGTG  93 164
        gltX 1628410 .. 1628438 + -13.3  -4.24413   CCAGCTGAAATAGAA        TAAACGGCAGG GCAGACG CCTGCCGTTTA        TTATTTGTTAGTCCG 100 43
HF553_RS07865 NONE
HF553_RS07870 1629627 .. 1629646 + -11.4   -5.2197   CCACCAACATTCAAA            CCCTCGCT GAAA AGCGGGGG             TTTTTGCTTTTTGTC 100 35
HF553_RS07875 1632012 .. 1632029 + -12.7  -3.97368   AGCGGCATAAAAAAA             CCGGGGA TAGC TCCCCGG              TTTCTACATTAAACG 100 40
HF553_RS07885 1634854 .. 1634878 + -12.2  -3.38812   ACAGAAAGATAGCAG         GCCCGATG-CG TGGG CGTCATCGGGC          TGTTATTCAGCAGGA  85 43
HF553_RS07900 1638470 .. 1638498 +  -9.6  -3.53444   CCGCCGCGAAAGCCG       CTCGCCGCCGC GATGACCA GCG-CGGCGAG        TTTGACGACGGCTAA  71 328
         glk 1640700 .. 1640716 + -13.7  -5.28481   CTTGTCAGTCTCAAA              CCGCGTG CCT CACGCGG              TTTTTTCATTGCCTG 100 134
HF553_RS07915 1642128 .. 1642144 +    -3  -3.14132   CACCAGCGCGTTGAG              TCATCA CGTCA TGGTGA              TTACTCAGGCGAAAA  45 115
        alaC 1643875 .. 1643894 + -13.6  -5.33026   GAGTAGAAAAGCAAA            CAGGAGCC CCAT GGCTCCTG             TTTTTCTTTGCATTG 100 35
HF553_RS07935 1646267 .. 1646285 + -14.6  -3.65812   GTCAGTGAATAGATA             GCGCCGAT AAT ATCGGCGC             TTCTGTTCCCCGGGA 100 219
        pgtC NONE
        pgtB NONE
        pgtA 1652603 .. 1652616 +  -2.4  -2.71364   CAATCTGGCTGACAA               CATC AGCAAC GATG                TCGTTAGCCAGATAA  40 56
        pgtE 1653789 .. 1653820 +  -8.7  -4.72986   TCTAGACCACATCAG      GATGTCATCGGTC ATAACC GGCCGATGACGAC       TTTTTGCTGAACGTA  89 36
HF553_RS07965 NONE
HF553_RS07970 1654703 .. 1654716 +  -2.3   -4.7173   GTCTTAAAACTGAAG               CCGAC CTCA GTCAG                TTTTTCCATATGCTG  64 459
HF553_RS07995 1658820 .. 1658857 +  -8.6  -5.00616   GGAATAAAAACGGGA   CATGTAAAGCTTTGCA TCGTCT TACAAGGCTTTGCATG    TTTTTTCAGGGAGAG  91 217
        mlaA 1661886 .. 1661904 +   -11  -4.76041   GGCAGTAAATAAAAA             GGTGAGCG CAA TGCTCACC             TTTTTGATCCGTCTC  95 43
HF553_RS08025 1663902 .. 1663938 +  -9.4  -5.66684   GTTAATCCGTTCATT    CACGACGCCTCCGTCA TCATC TGGCGGAGGCGTTTTC    TTTTTTTGTCGCTTC 100 36
        fadI NONE
        fadJ 1667652 .. 1667665 +  -3.1  -4.56597   ATGGATAAGGCACAA               TGCCGG CCA CCG-CA               TTTTTGCCGCAGCCA  64 151
        sixA 1668373 .. 1668386 +  -9.5  -2.84325   TCAACACCAGCAGCG               CGGCG TCGC CGCCG                TACTCTTTCGGCGCC  64 178
        prmB NONE
        aroC NONE
        mepA NONE
HF553_RS08065 NONE
HF553_RS08070 NONE
HF553_RS08075 1673593 .. 1673620 + -11.2  -3.01791   CAATAACGCCGTGGG        CCGGAAGGCGAC GCTT GCCGCCTTCCGC         TATTGACAGGCCCAT  79 35
        fabB 1677044 .. 1677063 + -13.6  -5.26875   GTATCAACAATGAAA            CAGGTCGC TAAT GCGACCTG             TTTTTTCATTCAGGG 100 60
HF553_RS08090 1677874 .. 1677910 +  -4.4  -3.15249   TTGCTGACCAGGCCT   CAGCCTGGGTGATGGCG CCTG CGTCATAAATC-GGCTG    TTCATAACCCCTGTC  47 136
HF553_RS08105 1679416 .. 1679452 +  -8.6  -2.60212   AATCCTGACGTTCAG    GTAGAGGGGGGCGTGG CCTTT CCCCGCCTTACTCTGC    ATTCTGGAGTAATGC  63 153
HF553_RS08110 1680843 .. 1680857 +  -7.1  -3.58536   AATCCTGCACCTGGG               CGGTG GTCAG CACCG               TTTGCGGCTGAATTT  60 222
        pdxB 1682897 .. 1682926 + -11.5  -3.80279   TAATGTCTTCTTAAT       GC-TCCCTGTCGAA TAA TGCGACAGGGACGC       TTATGTATTTCTGGA  91 38
HF553_RS08125 1683945 .. 1683962 +  -4.1  -2.62184   ATTGCGGAGAAGCTG             GTGCAGG AGTA TCTGTAC              TGATGTCCGGACAGC  44 5
        truA NONE
HF553_RS08135 1685497 .. 1685509 +  -3.3  -5.24531   ATAGAAAGTAACTCA                GCGGT TCG ACCAC                TTTTTTATCCAAAGT  77 37
        accD 1686555 .. 1686587 + -17.1  -3.06515   TGAGGCCTGATAACT      GAAAAGGGCAGGGCC GCA GGCTCTGCCCTTTTG      CTTTTCACCGTAAAG 100 31
        folC NONE
        dedD 1688732 .. 1688757 +  -9.8  -5.27938   AGATAAAAAGTGTGA         TGGCGTTGAA TATTTT TTCAGCGCCA          TTTTTATTTACGCGT 100 208
        cvpA NONE
        purF 1690907 .. 1690938 +  -9.4  -2.54896   AACGAAGGCTAATGG      C-TTTGCCAGCGGCG CGA TGCCGCTGGCCGATG      TCAATTACGTACCAC  68 29
HF553_RS08170 NONE
HF553_RS08175 NONE
HF553_RS08180 1696598 .. 1696622 + -14.9  -2.62613   ACGCGTTAACGCATA          ACCGCCGCGGC TAT GTCGCGGCGGC          ATCTTTGACCTCACG  89 32
HF553_RS08185 NONE
HF553_RS08190 1698690 .. 1698708 + -13.2  -4.37092   GCATTATTGTCCCTG             TTGCCCTG TTT CAGGGCAA             TTTTGTAACCGCGAT 100 58
        argT 1699766 .. 1699789 + -10.4   -4.7497   CTGGGGAACTATCAC          GGTGCAAAAT AGAT GTTTTGCACC           TTTTTGGTGCATAAG  91 63
        hisJ 1700857 .. 1700868 +  -7.2  -2.62184   CGGGCAAGGCACAGC                CGCC ATCC GGCG                 TGATGTGAGGCAAAA  57 134
        hisQ NONE
        hisM NONE
        hisP 1703219 .. 1703231 +  -9.1  -4.07568   GAAATGCGAATCCGG                CGGCT TCA AGCCG                TTTTGGCAGCGCCCG  80 136
        yfcF NONE
        yfcE 1706195 .. 1706209 +  -2.1  -3.12402   ATGATCAAAGTATCA               TTGCG CAGGT TGCAA               TTAACTCGTAATTTA  42 0
        yfcD 1706862 .. 1706891 + -10.1  -3.74224   TCCCGCATACATAAA       CTGGAGGCGATAGA TTT TCGATCGC-TCCAG       TTTCCCTGATTTAAC  80 56
HF553_RS08250 NONE
HF553_RS08255 NONE
HF553_RS08260 NONE
HF553_RS08265 NONE
HF553_RS08270 1712103 .. 1712131 + -11.8  -4.20084   TAATCATGGAGATAT       TGCCGGATG-GCG CTGA TGCTCATCCGGCA        TTTTGGATCAATGAT  95 38
HF553_RS08290 1718121 .. 1718140 + -10.8  -5.52384   ATTACGCATATAAAA            GAAGGCAT ACCA ATGCCTTC             TTTTTTTCATCGCCA 100 51
HF553_RS08295 NONE
HF553_RS08300 1719353 .. 1719370 + -14.1  -2.70946   CCTGATCATGATATC             GCCCCGC TTTG GCGGGGC              ATATTTATGGCAGAA  87 36
HF553_RS08305 1721634 .. 1721655 +  -4.3  -5.10497   TCATCCGGCGCCATA           TCAACCAGC TTTT GCTGGGCGA            TTTTTTCGATCGCTT  80 414
        lrhA 1725194 .. 1725227 +  -9.6  -5.61596   CGTAAATGTAAAAAA     GAGCCGCTG-GCGAT GAAAA AACGCTCAGTGGCTC     TTTTTTTGTGCCCAT 100 64
HF553_RS08325 1725677 .. 1725695 +  -2.4  -6.13503   GCTGTTTTTATCATT             TTCTACAG TAA TTGTAGGG             TTTTTTTTATTCCTC 100 315
        nuoA NONE
        nuoB NONE
        nuoC NONE
        nuoE NONE
        nuoF NONE
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK 1735772 .. 1735787 +  -2.5  -3.18199   TTCAGTAAGTGAGAT              GCGTG GATGAA CATGC               TTGCCTTAACCATTA  45 16
        nuoL NONE
        nuoM NONE
        nuoN 1740948 .. 1740965 + -11.3   -5.4833   AGTAAAAACGAAAAA             CCCGCTT CACG AAGCGGG              TTTTTTATTACCTGA 100 47
HF553_RS08405 NONE
        elaB 1743999 .. 1744015 +  -6.5  -4.56597   TTTTTTAGGGCAGTA              CCCCGTA TAA TGTGGGG              TTTTTAACAGGGAGG  76 88
        menF NONE
        menD 1747066 .. 1747081 +  -4.7  -4.06384   CGTTGCAGCAACTTT              TGGCT CAGGTA AGCCA               TTTATGATGTTGCAC  61 3
        menH 1747819 .. 1747829 +  -5.4  -3.41125   TGGCGTGGTAGACAG                 TCTG GCT CAGA                 TTCTGCGTCTCTGAC  56 1
        menB NONE
        menC NONE
        menE 1751091 .. 1751105 +  -2.1  -3.21924   GCCGTTTTGTTTATC               CGTTG ATGTG TAACG               TGTTATGAACAATCA  44 75
        pmrD 1751514 .. 1751564 +  -3.4  -2.98387   GGCTACCCAGACAAG CACATAGC-TGAGACTCAGCAGCGC ATAG GCTTTGCTGAG-CGCAAGC-GTGTG TAATGTTTTATGCCA  42 143
        pmrG 1759895 .. 1759915 +  -8.9  -2.64616   TTTTAACGCGGATAT            CGTCGCGGA AGG TCCACGGCG            TAATATCGCTCAGAA  59 273
HF553_RS08495 1760915 .. 1760932 +  -9.1  -4.30576   GCTGACGGCCCTTAT             GTTGGCG TAAA CGCCAGC              TTTTGATGCTAACGG  85 2
HF553_RS08500 1762259 .. 1762279 + -15.5   -2.9248   GCATAGAACTTTTAG            TGGGAAGGC CTG GCCTTCCCA            TCCTTATATACTTAT  93 35
        glpT NONE
        glpQ 1770569 .. 1770621 +    -9  -3.54543   AAGGTTTGCCATAGT CGAAGTGACGCGCCGGATGAGG GCATAAACG CCTCATCCGGCCTGGCGCAACG TTTGCCAGCGTAAGT  73 40
HF553_RS08540 1772926 .. 1772951 + -16.3  -2.87931   GATTTCGATATCGCC         TTTTGCCCTGC AGCA GCAGGGCAAAA          TCTCTCCCGGCTGGA 100 51
HF553_RS08570 1780459 .. 1780470 +  -2.2  -3.91032   TCAAAGGTAAATATT                TAGG TGTA CCTG                 TTTATCAGCTCCTTG  53 374
        gyrA 1785166 .. 1785183 + -14.1  -5.29846   GTTATTGCTGTGCGA             GGGCCGG AGAT CCGGCCC              TTTTTCTTTGCCGTT 100 42
        rcsC 1788446 .. 1788482 +  -5.8  -5.30575   AACCGCCTGCGCTGA    TTTTCTCCAGCAGGCG AGAAA CGCTTTCTGGGGTGAA    TTTTTTGCCTTTTTG  95 358
HF553_RS08610 1793439 .. 1793452 +  -9.5  -5.18357   AAAGATGTTGCTAAA               GGGCC TGCG GGCCC                TTTTTTCATGCCTTA 100 47
        apbE NONE
         ada NONE
        alkB NONE
HF553_RS08630 1798236 .. 1798274 +  -8.8  -3.32844   CTGCGTGAGTCGGCG   TGTTCAGATGCCCGGTAA GTG TGACCGGGCAGCGTAACA   TTATCGCGTGACGGC  69 163
        napF NONE
        napD NONE
        napA NONE
        napG NONE
        napH 1803980 .. 1804009 +  -2.7  -3.04398   GTAAGCGAGGAAATC       CCCAGGAGCATAG ATAA CGATGTGACTGGG        ATTTTGGAGCGCAGC  43 37
        napB NONE
        napC NONE
        ccmA NONE
        ccmB NONE
HF553_RS08685 1807221 .. 1807233 +  -6.2  -2.50493   ACTGAAAAGGGGGCA                CCGG TGAGT CCGG                CATTTTCATCGTGGA  53 19
        ccmD NONE
        ccmE NONE
HF553_RS08700 NONE
        dsbE NONE
HF553_RS08710 1811441 .. 1811474 + -16.7  -3.75105   GAGAAATAAGACCCT     GAC-GGCCCGGTGGCG CGG CGCCATCGGGCCTGGC     TTGTTACTGCATTCC 100 32
HF553_RS08720 1813821 .. 1813838 +  -8.4  -4.57341   GTAGGCATAAAAAAA             CCAGCC CTGAGA GGCTGG              TTTTTAAGGGGAATT  87 428
HF553_RS08730 NONE
HF553_RS08735 1815987 .. 1816007 + -11.9  -3.91798   TCCAATCGTGGAGAT            GGTTACCAG ACA CTGGTAGCC            TTTGATTGGGCGTTG  93 470
        yejK NONE
HF553_RS08770 1825341 .. 1825356 + -11.8  -5.10208   AAACGCATAAAAAAA              CCCCGC CGGG GCGGGG               TTTTTCTTCAACTTC 100 96
        rsuA NONE
HF553_RS08790 NONE
HF553_RS08795 1830761 .. 1830780 +  -3.4  -3.71924   GCGCCTGAAAGCGTA            GGCTGGTG GACG CGCAGGCC             TTCTTCGATAATTTG  51 438
HF553_RS08845 1842247 .. 1842265 +  -4.6  -3.42257   TCGATATCATGAATT             TGATAGTT TAT ATCTATCA             TTGATGTATTTACCG  52 323
HF553_RS08850 NONE
HF553_RS08855 1843314 .. 1843330 +  -2.1  -3.19602   CGAACCGGCAATGAT              CCAGCCG ACG CGAATGG              TATTGGTATACAGCG  43 213
        fruB NONE
        fruK NONE
        fruA 1848533 .. 1848550 + -11.3   -5.4833   AAACACGCTAAAAAA             GGCAGAG CGCG CTCTGCC              TTTTTTATTGCCTGA 100 44
HF553_RS08890 1851570 .. 1851583 +  -3.7  -4.80882   AGAGGAGGGCTGCCC               GGGCG GCAT CGCCA                TTTTTAGTATCCGCT  71 47
        lysP 1853285 .. 1853302 + -11.3  -6.07374   ATCTGACTCTTCTAA             CCCTCTC ATTC GAGAGGG              TTTTTTGTTTTTTCT 100 103
        cirA 1855550 .. 1855584 + -16.4   -2.5294   CCGTTTCTGACAGAG     ACTGGCGACAGCCGCG TTT TGCCGCTGTCGCCAGA     ATGTTATAACCGATG 100 31
HF553_RS08915 NONE
HF553_RS08920 1860030 .. 1860043 +  -8.1  -2.60392   GAATGGCGTCCTGCG               GCTGG CTGG CCAGC                ATTAATTCGCAGCTA  56 247
        folE NONE
HF553_RS08935 1862877 .. 1862920 +    -6  -2.94563   GATGTTTCTCACGCA GCCCTG--GGCAGGGGGCTG ACAAAA TAGCCGCCTGCTAACGGGGC ATTTGTGAGCATTTT  55 93
        galS 1864010 .. 1864027 +  -6.3  -4.21989   GTAACCGTTTTCAAT             CTGTGAG TAAA TTCACAG              TTTATTAACATTGTG  70 54
        mglB 1865562 .. 1865583 +  -3.7  -2.70932   ATAACGTATTTCTTT           TG-CCATCCG GCG CGGATAGTCA           TAATTAAAAAGGCCG  45 109
        mglA NONE
        mglC 1868191 .. 1868219 + -10.2  -3.16683   TTTGCTTATCAGATA       ACCCGGCGCAGCG AAAC TGC-GCGCCGGGC        TTCATACCGTGAGCT  74 58
HF553_RS09000 1876698 .. 1876710 +  -3.3  -2.89881   CGTCGTAAACGAATA                AGGAG AAT CTCCA                TGTCTGAAATAAATC  44 25
        gtdA 1877730 .. 1877740 +  -2.4  -3.81146   GCCCTGGGGCTGTTC                 CGCG AAG CACG                 TTATTAATTAGGGAG  51 8
HF553_RS09010 NONE
        maiA NONE
HF553_RS09020 1880391 .. 1880411 + -11.9  -5.58454   TTTGCTCATCGCAGA            GAGGCGTTA TGA TAGCGCCTC            TTTTTTTGCTGTGGA 100 91
        dusC 1881633 .. 1881650 +  -6.3  -2.50575   CGTATTGCAGCAAAA             TCGTTCA TTTA TGAACGG              GTTAGTGGGACTTTT  53 286
        mdtQ 1883262 .. 1883277 +  -3.2  -2.71011   GGCGGCGGTTATCAT              TCCTGA TTTT TCCGGA               TGATTCAGACAGGGT  43 20
HF553_RS09040 1884104 .. 1884116 +  -6.2  -2.59564   AAATAAACGCCGGGG                GCCG GATGG CGGC                GTTATGCCATCCGGA  53 35
HF553_RS09050 1885518 .. 1885538 +    -9  -2.79302   GACGATTCTTCTGTA           GCGGCAACG CTGG CGT-GCCGC            TATGATGCCACTGCT  66 85
        pbpG 1886610 .. 1886628 +    -6  -3.25802   CGCGCCGCCGGGCTT             CACGGT AAACCGC ACCGTG             TTAATGCGTTTCGTC  57 64
        bglX 1890938 .. 1890956 +  -9.5  -2.88663   AGCCTGCCGTCAACA             GGGCGCG ATAGC TGCGCCC             TGTCTGGCAATGACT  70 40
HF553_RS09070 NONE
HF553_RS09075 NONE
HF553_RS09080 NONE
HF553_RS09085 1895062 .. 1895072 +  -6.8  -4.37092   GTTGCTGCTGCTGCG                 CCAG CGT CTGG                 TTTTCTCCGCACCAT  74 238
HF553_RS09100 NONE
        yehT NONE
HF553_RS09110 1899261 .. 1899277 +  -2.3  -3.07935   AATAGGTTAACTTGA              TTTCAAT ACC GTTGAGA              TTACCTACATAGCGT  42 420
        apbC 1903651 .. 1903683 + -17.3  -2.89564   TGGTGTTAAATCTTA      TTCATCGCATCAATG ATA TATTGATGCGATGAA      TATATGGAATGGAAA 100 45
HF553_RS09135 1904200 .. 1904229 + -14.5  -5.64421   TATATTGTTTATTAA       GCCTCTATCATTT CAAT GAATGATAGAGGC        TTTTTTATTTGCGGT 100 46
HF553_RS09140 1905010 .. 1905030 +   -14  -4.41206   TATAATTGATTTGTA            GGCCGGCA TAACC TGCCGGCC            TTTTATAAGGTAGTT 100 32
HF553_RS09145 NONE
HF553_RS09150 NONE
HF553_RS09155 1909250 .. 1909276 + -16.7  -5.28778   AGTAATCAATGCTAA         GCACACTCTCC TTAAC GGAGAGTGTGC         TTTTTTATCGATGAT 100 36
        thiM NONE
        thiD 1911574 .. 1911586 +  -4.8  -2.66964   TCCGGTACATCATTT                CCAC GCGTG GTGG                TAGTATACTGCCTAC  48 10
HF553_RS09175 1912586 .. 1912627 +  -5.1  -3.59315   CTAAAATACCACGCT CCGTCTTTATCGTGGCGC ACCACCA GCGGCGCGGAAAAG-CGG TTTACCCATGCTTCG  55 240
        fbaB 1917355 .. 1917369 +  -8.5  -3.99805   AATAAGATAGGAGAC               GCCGC CCAAC GCGGC               TTTAAGTTTTTCCGG  74 495
HF553_RS09205 NONE
HF553_RS09210 1919663 .. 1919688 + -11.9  -3.57561   TATATGCAACCGCCG         CCTGGTTGCAA ATGA TGGCAACCAGG          TTTACCAGCTTCCAG  81 413
HF553_RS09225 1923435 .. 1923450 +  -6.2  -4.77567   ATGGAATCCATTTAA              TCTACT TATT AGTAGA               TTTTATTATGAAAAT  80 509
HF553_RS09230 1924084 .. 1924098 +  -2.9  -5.28561   GAAATATTAATTGGA               TATGT CGTGA ACATA               TTTTTGTTATATGTT  76 84
HF553_RS09235 1925340 .. 1925356 +  -4.4  -3.60792   TCATTTTTATGGGCG              TAGGGG ATTCA CCCTTA              TTTAAAGATTACAAA  55 345
HF553_RS09245 1926953 .. 1926963 +  -5.4  -3.92267   ATAAAAAAACACAAG                 CAGT TAT ACTG                 TTTAGTCTCTATATC  63 58
HF553_RS09250 1927547 .. 1927561 +  -2.9  -3.20878   GCGAGGGGGAGCCAT               CAATT CCAGT AATTG               TTCCATTAAATGTTA  45 186
HF553_RS09260 NONE
HF553_RS09265 1928379 .. 1928390 +    -3  -3.08679   GAAAAGCTGCTATAT                TTTG CCTG CAAA                 TATTAAGTGGAGACG  43 186
HF553_RS09275 1929151 .. 1929172 +  -2.3  -2.73854   TAAAATTATCTGGTG           TCGAGATTA CAAC TGATGTCGA            TGGTATGATTTGCTG  40 91
HF553_RS09280 1930014 .. 1930031 +  -6.9  -4.01137   GGACTATTTGCAGAA             GCACTGC GGAT GCTGTGC              TTTATGAATTGTCTG  70 295
HF553_RS09285 NONE
HF553_RS09290 NONE
HF553_RS09295 1931570 .. 1931586 +  -3.7  -3.90588   TTGACGCTTATTTAG              CAATCAT ATC ATGAGTG              TTTAATTGAAAAATA  57 44
HF553_RS09300 1932674 .. 1932687 +  -3.1  -4.11484   CTTCCCGAAGCGCCA               CGATG GTTT TATCG                TTTTCCAGCGTTACC  58 299
        ibsA 1949043 .. 1949063 +  -3.2  -3.01791   AAATCATCGCCGCCA           GCGA-CGGG TATG CCCGGTAGC            TGTTCGGAAAGCGCT  43 176
        alkA 1951618 .. 1951631 +  -3.7  -4.08767   AGAATCACCTGGCAG               CCGCG TTGC CGCAG                TTTTCGCAGAGTCGC  60 312
         udk 1955301 .. 1955326 +  -2.6  -3.14132   GTGATAACCTGGTTA         GCCCTTGA TGTGCTTGAT TTAAGGGC          TTGATGCGCGAAAGG  45 65
         dcd 1955939 .. 1955956 +  -2.6  -2.53263   TAAAGACTGAGCCAT             TCGGCG CAATAC TGCCGG              TCCATTGAGGGTAGC  40 31
        asmA 1958136 .. 1958148 +  -6.2  -3.83026   CACCAAATCCTCCAG                CGGC ATATG GCCG                TTTGCTGTCCAGGAA  63 333
HF553_RS09395 NONE
         wzb NONE
         wzc NONE
        wcaA NONE
        wcaB NONE
        wcaC NONE
        wcaD NONE
        wcaE NONE
        wcaF 1969063 .. 1969080 +  -4.1  -3.54424   GCGCGTTCAGAAAGT             TACTCCC TAAC GGGACTA              TTTGAGGAAATGAAA  52 16
         gmd NONE
HF553_RS09445 NONE
HF553_RS09450 NONE
        wcaI NONE
        cpsB NONE
        cpsG NONE
        wcaJ 1977339 .. 1977356 +  -6.9  -3.30338   GTCCGTGTTCAATCT             GGCGGCA CCAA TGACGCC              TTGTGAACAGGTTCT  61 115
        wzxC NONE
        wcaK NONE
        wcaL NONE
        wcaM 1982804 .. 1982814 +  -2.6  -3.14211   GGTAAGTACCGTTAT                 TTTT ACG AAAA                 TTCCTGGGAAAAAGT  45 36
        galF 1983907 .. 1983958 + -10.1  -4.75518   TGATAAACATAATAA CGGCAGTGAACATTCGAAGCGGC AAGTTG GCTGAAACGAGTGTTGACTGCCG TTTTAGTTTTGTATA  91 68
        rfbB NONE
        rfbD 1986236 .. 1986249 +  -8.1  -4.55287   TCTGATAAATTTAAA               TGCCC ATAA GGGCA                TTTTCTATGAATGAG  82 36
        rfbA NONE
        rfbC NONE
HF553_RS09520 NONE
        rfbF NONE
        rfbG NONE
        rfbH 1991885 .. 1991901 +  -6.7  -4.43576   GAAGAGTTCTTTGGT              TTGAATT TCT AATTCAA              TTTATTCTATCTGGT  74 14
HF553_RS09540 1992816 .. 1992836 +  -3.3  -4.28548   AAGAACTACTGAAAC            GGTTATGAG ATT TTCATGATC            TTTTAATAAATAAAT  60 18
HF553_RS09545 NONE
        rfbV 1995223 .. 1995242 +  -2.2  -3.97636   AAGTTATTATATTGA            GATTAAAT GTAG ATTTAACC             TTTCTGGATTCAGCT  53 45
HF553_RS09555 NONE
        rfbN NONE
HF553_RS09565 NONE
        rfbK NONE
HF553_RS09575 2002006 .. 2002029 +  -9.6  -2.72511   ACTATTCACCTTTAA          CCTGCCATGA CCGT TTGTGGCAGG           GTTTCCACACCTGAC  69 139
        gndA 2003482 .. 2003500 + -11.7  -6.06529   TGCAAAAATGTTTAA             GCCCGGT TTAAT ACCGGGC             TTTTTTTTATCTCTA 100 45
         ugd 2004874 .. 2004893 +   -10  -3.10244   TGATTAATAAGGCAA            TCGGGGCT GATG AGTCCCGA             TGATTTATTGACCAA  73 34
        wzzB 2006035 .. 2006071 + -15.3  -3.72592   GAAAGGTAAAATTTC    TCATAAAAAAACCGGGC ATT GCCCGGTTTTTTTACGC    TTATTGATGACGCTT 100 69
HF553_RS09640 NONE
HF553_RS09645 2015453 .. 2015480 +  -9.2  -5.63103   TGCAAAAAATGACAC        TAACCGACGTTT TAAT ACGCGTCGGTTA         TTTTTTTGCTTCAAA 100 127
        yoeI NONE
        plaP 2017023 .. 2017041 +   -16  -5.43414   TCGGCAATAGTAAAA             CCGGAGGC AGT GCCTCCGG             TTTTTTGTCTGTCAT 100 53
        phsA NONE
        phsB NONE
HF553_RS09685 2025547 .. 2025582 +   -12  -2.99251   CCATAAAATAATGTC    AGCAAGAAAATGTGCC TTGT GTCACATTTTCTTGCA     ATTTATCCATGTTTG  81 47
        dacD 2026935 .. 2026950 +  -3.3  -2.79796   AAGGCTGTAATTATA              CTGTA CATTCA TACAG               TATGATGAAGTGACG  43 139
        sbmC NONE
HF553_RS09700 2028724 .. 2028737 +  -2.3  -3.53012   GGCAACGATTTTATC               CCCGA ACCT TCAGG                TTTCCCCAGACGGCG  47 131
HF553_RS09705 2029206 .. 2029240 + -10.7  -3.65529   CCGAATAATGCGCTA     CGGCAGTGGGAGCGT ATATC AGGCTCTCACTGCAG     TTTGACTCCGCCTGT  83 33
        pduF 2047413 .. 2047432 + -12.2  -4.47259   CGAACTGATCAAAAC            GTCTCCCA GCAA TGGGAGAC             TTTTGATATTGTCAT 100 113
        pocR 2048839 .. 2048852 +  -8.1  -2.82516   GGGTGAAAATCCCCC               GCAGC CCCC GCTGC                TGTGATGCTGACGAC  60 411
HF553_RS09825 2050414 .. 2050444 +  -2.5  -2.89881   ACTGGCTGGCGGCGG       CGAGGCGAGTATT ATGAC GATCCTTGCCTGG       TGTATCGCCTGGGTG  42 9
HF553_RS09830 NONE
HF553_RS09835 NONE
HF553_RS09840 NONE
HF553_RS09845 NONE
HF553_RS09850 NONE
HF553_RS09855 NONE
        cbiG NONE
HF553_RS09865 NONE
HF553_RS09870 NONE
HF553_RS09875 NONE
HF553_RS09880 NONE
        cbiM NONE
HF553_RS09890 NONE
HF553_RS09895 NONE
HF553_RS09900 NONE
HF553_RS09905 NONE
        cobU NONE
        cobS 2064439 .. 2064456 +  -4.8  -2.76696   AATTGATCTTTCTGC             TGGCTC TGTTAT GAGCCG              ATTATTACGGACGAG  49 12
        cobT NONE
        ldtA 2066893 .. 2066910 +  -5.5  -4.07568   ATTAACGAGGTGCCC             CTGGCTT GTCA AAGCCTG              TTTTCACAAAAAAAG  65 362
HF553_RS09940 2068754 .. 2068781 +  -3.3  -4.29508   AAGAAGTTATCTTTA        CCCGGTTGACC CGAGAA GGTTTACCAGG         TTTCTTGATATCCAT  60 89
HF553_RS09945 2070118 .. 2070137 + -13.6  -3.82097   GAAATTTTTGTTAAA            GGGGGAAC GGGT GTTCCCCC             TTTGGTGCGTTTCAA 100 43
HF553_RS09950 NONE
HF553_RS09955 2071946 .. 2071969 +  -7.4   -4.1399   CTATGTTTCCATCCG          CCCGGAAGTC TCAC GATTTCCCGG           TTTATCTGTACCTGC  72 394
HF553_RS09965 2073550 .. 2073561 +    -3  -5.06052   AAGAAAATGTTTAAT                TGAT GTAA ATCA                 TTTTGTGTTTTTTGG  73 179
HF553_RS09970 NONE
HF553_RS09975 2075015 .. 2075036 + -12.3   -4.4078   ATTATCTCTGACGCT           TGGGGCCTT AATA AGGGCCCCA            TTTTAATTAAAAGAA 100 69
HF553_RS09985 NONE
HF553_RS09990 2077290 .. 2077327 + -12.7  -3.78934   AAAGTGGTTGAATGA   AGCCTTAGCGGGAGGTG ATTC TGCATCCCGCTAAGGCC    TTATTGTGCCGCGGC 100 101
HF553_RS10000 2079333 .. 2079377 + -16.2  -2.63596   TGCTATTCCACACTA TTTAGGAACACGTTATCGTAGC TTA GCT--GATAACGTGTTCCTAAA TAGTGTGGAATAGCA 100 213
HF553_RS10030 NONE
HF553_RS10035 2083273 .. 2083286 +  -2.3  -4.05004   CCCCTAAAACGTCAT               AAGCG AATT CGCTA                TTATTGTTCTCGTCG  55 144
HF553_RS10040 NONE
HF553_RS10045 NONE
HF553_RS10050 2084334 .. 2084364 +  -8.3  -2.79925   TTGATGTGTTCTGAC       GTCTATCAGCCCC TTCAT GGGGCTGATACAA       ATATTATTTGTCTAT  64 37
HF553_RS10055 2084898 .. 2084914 +  -3.7  -3.35774   ACAGCAAGGAGTTCT              GATGG ATCAATA CCATC              TTCTAACAGTTTCTG  49 286
HF553_RS10080 2089150 .. 2089172 +  -3.4  -4.09739   AGTTTTAACAAGAAA           CATGGATAAA CAC TATATCCCTG           TTTTACAGGACTTAA  57 159
HF553_RS10090 2090490 .. 2090504 +  -4.2  -2.51045   CTTTCTCCCGTCATA               CTGGAG TAG CTCCAC               ATCTCTTGTCCATCG  43 309
HF553_RS10105 NONE
HF553_RS10110 2092516 .. 2092532 +  -3.8  -3.19007   TGATTTTTGTTGACA              TTTACA TTTAT TGTAAA              TATATTGCATTTTAT  48 368
HF553_RS10115 2094001 .. 2094013 +  -2.7  -2.63715   CTTTTCTTATGTGTT                TTGAT GTA ATCGA                TGGTGTGAGATCCAT  40 419
HF553_RS10125 2096670 .. 2096687 +  -8.5  -5.65513   TAAATCTCCCAAAAG             GCAAAGA GCGA TCTTTGC              TTTTTTTAATTCATC 100 295
HF553_RS10130 2097363 .. 2097384 + -10.9  -4.48713   TCACGTCTATTTAAC           GAAGAGGGC GCAG GCCCTTTTC            TTTCTTATTGCTAAA  93 27
        pilV 2099126 .. 2099139 +  -8.1  -4.15453   GAAGAGGATGTGAAA               GGGTC GTGA GACCC                TTTTAAACTACATTA  76 250
HF553_RS10150 2101338 .. 2101363 +  -9.1  -5.99154   GCGTAAGTGACAAGT         TACAGGGAGAGT AAA AC-CTCCCTGTG         TTTTTTTATTTACTG 100 31
HF553_RS10160 NONE
HF553_RS10165 2104055 .. 2104085 +  -6.2  -3.53444   CCAAGCCTGTCATAA       CATAGTAACATCAC TTA GTGGGGTTAATATG       TTTGCAAAACAATAC  60 133
HF553_RS10175 NONE
        umuD NONE
HF553_RS10185 2108077 .. 2108089 +  -6.3  -3.50869   GTTAATGGTTGTGCG                GTTTG ATA CAAAC                TTATCTGAAGTAGTG  60 338
HF553_RS10190 NONE
HF553_RS10195 2108640 .. 2108654 + -11.4  -5.24531   AAATAATTCATATTA               GCTCCG TAC CGGAGC               TTTTTTATGCCCGAT 100 35
HF553_RS10205 NONE
HF553_RS10210 NONE
HF553_RS10215 NONE
HF553_RS10220 NONE
HF553_RS10230 2115800 .. 2115812 +  -4.9  -2.78384   CATCCTCGTCTAAGG                TGAAA ACG TTTCA                TCTGATACAGGAGGC  49 70
HF553_RS10235 2116023 .. 2116042 + -12.8  -4.34402   AGCCCGATGACAAAA            CGCCCGGT TAAT GCCGGGCG             TTTTGCTGTGGAGAA 100 31
        yedQ 2118282 .. 2118300 +  -5.2  -2.57985   CGGGTTAGGGCAGAC             TGGGCC CGGTTTA GGCCCG             TCCATTCGCTTATCA  46 413
        dsrB 2119641 .. 2119652 +  -4.4  -4.28115   TGTCAGCCGCACTAC                GTGA TAGA TCAC                 TTGTTTATTATGCGT  66 118
        fliE 2131707 .. 2131737 +  -2.5  -4.61482   CGGGGGGGCCGCGAC       GCCCATGCAACCA GTGCA TGATTATGTGGGC       TTGTTTTTTGCGAGG  65 97
HF553_RS10350 2134536 .. 2134546 +  -2.4  -3.30554   GCGTTGCAGAAGAAC                 GTCG CTT CGCC                 TTGATCATTAGTTAC  43 117
HF553_RS10375 2140028 .. 2140043 + -10.4  -5.26875   GTGGTACACAATCAA              GGCAGC GAAA GCTGCC               TTTTTTAATTCCGGA 100 64
HF553_RS10380 2141281 .. 2141304 + -10.2  -4.04318   TGACATAGTTTTGTT          CGGGGTGGGC TTTT GCGCATCCCG           TTTATCCTATCTGGC  82 33
HF553_RS10385 NONE
        fliZ NONE
        tcyJ 2143816 .. 2143833 +  -5.5  -5.67283   ATGTCAGCAAACGGA             GGCGCGTG AAT CG-GCGCC             TTTTTTATTTCCGTT 100 95
        dcyD NONE
        tcyL NONE
        yecC 2146514 .. 2146525 +    -3  -3.39327   GTTAATTTAAGTCAT                TCAT AATA ATGA                 TTATCAATATCAAAG  46 215
        sdiA 2147311 .. 2147337 + -12.2   -5.1861   GCGCCAGACGCGAAA         CCGGCTGAAAGC GAT GCTAACAGCCGG         TTTTTTACTACTGGC 100 58
        uvrY NONE
        uvrC NONE
        pgsA 2151114 .. 2151126 +  -4.1   -3.5394   ACGTGGAGATTTGCT                TGATC AGT GATCG                TTTCGCCGCAAATTT  52 16
HF553_RS10445 NONE
HF553_RS10450 NONE
HF553_RS10455 2151619 .. 2151632 +  -8.1  -5.66684   AGCAGTGTCGTGAAA               CCACC TACG GGTGG                TTTTTTTGTGCCTTC 100 70
HF553_RS10460 2152170 .. 2152192 +  -3.4  -2.94329   AAACGAGTATATAAC           TGTTCAGGAG TAT TTTCTGCACA           ATTTAATTAAAGGTA  44 39
HF553_RS10465 2153971 .. 2153990 +  -3.5  -3.95324   GATGTGATTATGTGC            CTCACAC ATTGAA GTGAGAG             TTATTGTTGGCGGTA  55 187
HF553_RS10470 2154369 .. 2154388 +  -6.4  -4.52589   CATGAGTATAATATA            GCGAGAAA CCCA TCTCTCGC             TTTTGTATGGGGCGA  76 46
HF553_RS10475 2155279 .. 2155315 + -18.1  -3.66874   CGGCCATAGCGTGAC    GATTATCGAGCCTGGAC GGC GTCCGGGCCCGGTAATC    TTTGCCTGACATTAA 100 52
HF553_RS10485 2157216 .. 2157238 +  -2.8  -3.59867   GTCGGATAATCCTGG          CTGG-TCAT TGCGGC ATGAGCCAG           TTCATTAATTTTTTG  49 237
HF553_RS10500 2159391 .. 2159410 +  -9.2  -3.23692   GCTTCATCTGCCAGA            CGCGACAG CGTG CTGGCGCG             TTGCTGATAATCCTC  65 400
HF553_RS10510 2160790 .. 2160808 +  -2.4  -3.61398   ACAGGCTGAACATAT             CTATTATC CCT GGTAATCG             TTATTCACCCAGGGC  49 10
        otsB NONE
        otsA 2164001 .. 2164018 +    -4  -3.55761   TTTCGCCTGAACAGG             GCGGGC GATAGA GACCGC              TTTAGCCAGTAGCTG  51 388
        flhD NONE
        flhC 2165829 .. 2165852 + -15.4  -5.86332   TGGACAAACACTCCA          GCAGCGGTAA GTTA TTACCGCTGC           TTTTTTTTGCCTTGC 100 52
        motA NONE
        motB NONE
        cheA 2169742 .. 2169757 +  -3.2  -2.75064   CCGCGAACAACGTAT              GGCG ATCACAGC CGCC               TGATTGAGTGAGAAG  43 7
        cheW 2170280 .. 2170327 +  -8.4  -3.50853   CAGCATCACACGTCG CGTAATAACGTTGCCGGATGGCG TCG CGCCATCCGGCAATACTAGC-CG TTATGCTTCCGCCAG  71 21
         tar 2172282 .. 2172304 +  -6.9  -2.76483   GTAATACGGGAAGCA          TGGCGCTGCC GCAG GGC-GCGCCC           GTTGTACTTTGAATG  55 125
        cheR NONE
        cheB NONE
        cheY NONE
        cheZ 2175363 .. 2175394 + -13.1  -3.10493   GAATCCGTCAACCCG      GCCGGATACGAGA CTTTCT TATCGTATCCGGC       TATCTCTATTAACGC  86 78
        flhB NONE
        flhA NONE
        flhe 2179133 .. 2179151 +  -4.5  -3.56042   ACCGTTCCTTTCTTT             GCCAGGT AGCAG ACCTGAC             TCTCTTTTTGAATAA  54 40
HF553_RS10610 2180625 .. 2180650 + -10.3  -4.09685   TTCGCATGATGGGTG         CGGCGGTAACG CCGT CGCTTCCGCCG          TTTTCCAGAATCAAG  86 156
HF553_RS10625 NONE
        cutC 2185961 .. 2185985 +   -10  -5.71983   TGCTTGCTCGTACCA          GGCCCCTG CCAATTCAA CAGGGGCC          TTTTTTTCTCCTTCA 100 73
        aspS NONE
        nudB 2192372 .. 2192392 +  -3.2  -5.40474   AAGAGTTTGTCATTA           ACGTCGCCT GAAA AGGCG-CGC            TTTTTTTGAGGAAAT  81 15
HF553_RS10670 NONE
        ruvC 2193719 .. 2193739 +    -9  -4.27316   GCGCTAAATTATTCT            CCCTCAGC CTCGC GTTGAGGG            TTTTCAATTCCACAG  82 34
        ruvA NONE
        ruvB 2198028 .. 2198038 +  -4.6  -2.78596   CAACACTACGGATGG                 CCCT GCC GGGG                 TATCATAAAAGGCTG  45 170
        znuA NONE
        mepM 2201874 .. 2201896 + -13.4   -5.8901   AAATGCGCTGACAGA           GCCGGTACGC GAT GTGTGCCGGC           TTTTTTGTTTTGTGT 100 42
        lpxM 2202951 .. 2202968 + -11.3  -3.96148   CATCAAATAAATAAA             GCCTCTC GTAA GAGAGGC              TTTATGCTGACAAAC  91 31
         zwf 2207350 .. 2207375 +  -5.4  -5.80364   TTTTTGCACTTTTAA         GCCTCGTGTGG ATTCA CC-TGCGAGGC         TTTTTTTATTACACT 100 105
         edd NONE
        kdgA 2210067 .. 2210099 + -11.4  -3.08046   GTCTGATAAAAATGC     GCTAACGTCGCCATC AGGC GATGGCG-CATTAGC      CTTTTACCGTCACGC  79 97
        yebG 2211706 .. 2211716 +  -4.6  -4.41206   CTGAACCCGTACTTG                 CGCT CCC GGCG                 TTTTGTACCATGCTT  66 37
HF553_RS10760 2212118 .. 2212130 +  -5.5  -4.17048   TAAGCCCCGCTAGCA                GCGTA ATT TGCGC                TTCTTTTGCCGGAAC  67 28
HF553_RS10765 2212894 .. 2212908 +  -5.6  -3.39908   TTAAGTAACATGTTT               CGCTTG CAT CATGCG               TGTCTTTTGCCACCC  56 51
        ptrB 2215141 .. 2215175 +  -8.6  -3.16676   CGCATAGACGCGCGC     CCGCAATGGCTTGTGA GCG TCGCGGGTTATTGTGG     TGTTCCATTGCTGCG  67 34
        yobA NONE
        copD NONE
HF553_RS10800 2218660 .. 2218687 +  -8.5  -5.76633   ATTTTTAATAAAAAA        CCGTAAACCTT CACGAA AAGGCTTACGG         TTTTTTTATCTCTGA 100 44
HF553_RS10860 2228591 .. 2228601 +  -4.6  -3.33744   CACCCGCCGTCAATG                 GCTC AAT GGGC                 GTTTTTCCGAGGGCG  51 486
       sopE2 2231195 .. 2231226 +   -11  -4.75288   CTATATATTCATTTT      TATGGCGACGCTTT TAAC AAAACGTCGTCATA       TTTATTTTAATATAA  95 98
HF553_RS10880 2231609 .. 2231653 + -15.1  -3.94438   ACAGGTGATAGTGAG TAGCTCGCTGCGCCAGGGG ATAACGC TCCCTGGCGCAGTCAGTTA TATTTTATTGCGATG 100 63
        pphA 2232738 .. 2232753 +    -6  -4.44608   ATGAAGAATAAATAA              CCCGCC TGGC GACGGG               TTCTTTTTGAGTCAG  76 319
HF553_RS10915 2239175 .. 2239194 + -12.2  -3.15996   GTAGCAATTACTGAT            GGCGTCAT TATA ATGACGCC             TGTTCATGCCTGCTG  83 53
        proQ NONE
         prc 2242007 .. 2242028 + -13.1  -6.06723   ATAAGTAACGCTAAA           CAGGCACAA AAAA TTGTGCCTG            TTTTTTTTTAACAAG 100 33
        htpX 2243099 .. 2243116 + -12.7  -5.42259   TGGCAAGTATGAAAA             GCGCGTC GAAT GACGCGC              TTTTTTTACGCCTGA 100 50
        kdgR 2245493 .. 2245515 +  -9.9    -5.626   TGACGTTAAAAAAAA           GCAGCTACG AAAAA TGTAGCTGC           TTTTTTTATAACATC 100 56
        mgrB NONE
HF553_RS10955 2246850 .. 2246866 +  -2.9  -5.26907   AGAACATCACAAAAA              GCGGTGT CGA AAATCGC              TTTTCTTTTCTATTA  76 159
HF553_RS10960 NONE
        cspE 2247634 .. 2247652 + -12.4  -4.89009   AGCCTCAGATATAAA             GCCTCGCT AAA AGCGGGGC             TTTTTAATTCAATAT 100 74
        ftsI 2249563 .. 2249590 +    -7  -3.53224   TAAAGGATTTTCCCG        GGGCGCAATT CGCGTTAC ACTTGCGCCC         TTTAGCGCCCCAGTC  62 38
        rlmA 2250435 .. 2250458 + -10.4   -2.5655   CGTTAACCGTGAAAA          T-GCGTCCAGA GGA TCTGGACGCCA          ATTCCTATCAGTACG  70 35
        yoaE 2256682 .. 2256734 + -12.5  -3.09635   ATCGCGGACATAATC TGTCCGTTATGCCGGGCGGGCGGCG GCG CGCTGCCCGCCAGCCACTGTGGAAA TTCGCTAATGGGCAT  81 75
HF553_RS11030 2262411 .. 2262421 +  -2.4  -4.56597   AGAATACGTGACTTA                 CTGG AGC CCTG                 TTTTTCCAGCACCGC  65 209
HF553_RS11040 NONE
        tsaB NONE
HF553_RS11050 2266047 .. 2266071 + -14.4  -2.56596   GTTTTATCAATAAAA          GAAACAGCGG CTGGT CCGCTGTTTC          TGCATTCATAGAGAC  87 47
        fadD 2267939 .. 2267955 + -11.5  -5.75342   TCAGCTAACGAGAGA              CGCCGGT TAA GCCGGCG              TTTTTTTTGGCGCGA 100 49
         rnd 2269188 .. 2269203 +    -9  -4.72272   TAAAAAAATAAAAAA              GGCAGA TTCT TCTGCC               TTTTTAATCCAGGAA  90 98
HF553_RS11080 2271478 .. 2271488 +  -8.2  -2.55544   CGTTAAACGGTATTC                 GGCG CCG CGCC                 TGAATTCCATCATGA  59 35
HF553_RS11085 NONE
HF553_RS11090 2272807 .. 2272821 +  -5.6  -3.71998   CAAATTCCGTCACCT               GGCGTT ATC ACCGCC               TTCTATTCCTCCCTC  61 116
HF553_RS11095 2273226 .. 2273254 +  -8.7  -5.17054   TGTGCTATTAACCAA        CCGCCTGATGCTG CTT CTGTGCCAGGCGG        TTTTTTACATCTTCT  91 46
HF553_RS11100 2273595 .. 2273628 + -11.7  -2.92171   AGCGCCATTAATCAC     CTGGCTACTGGGCGG GACG CCGCCCAGTAGTGAC      TGGTTTACCGATGTC  80 50
        fadR 2277531 .. 2277542 +  -4.4  -4.27617   GTTGCTCAGGTTATA                CTGT GACG ACAG                 TTTTGATCGAATCTC  66 309
HF553_RS11130 NONE
        dadX 2281549 .. 2281580 + -13.7  -3.29043   TAATTCAGGCTAAGG      CGTCGACCGGTCC ACCTGG GGGCGGGTCGACG       TTGTCCGACGACCTT 100 43
        emtA 2285201 .. 2285258 + -10.7  -3.14257   ATAATCCGCTGCAAC TC-CCGCTCCACCGCC-GGGCTAACGTT AAGGA AACGAAAGCTCAGGCGG-GGAGTGGTGA TCGTTTCATTTTTCC  69 106
HF553_RS11160 2286311 .. 2286338 +   -12  -2.62184   TGCAGAACGTGTAAG        CGTTGACCCGGT CAGC GCCGGGTCAACC         TACTATAAACACGCG  79 45
HF553_RS11220 2300146 .. 2300163 + -11.3  -4.53707   TTATGAAATAAAAAA             TCCACGC GGCT GCGTGGA              TTTTATGAGTTTCTT 100 104
        ychH 2302582 .. 2302608 + -10.1  -2.65388   AGCTAACCGGTTCAG        GCCCGGTAAGCG TTAT CGCC-ACCGGGC         ATTGTCCATTAACTG  70 35
        hemA 2308700 .. 2308712 +  -2.7  -3.59262   CACACACCACACTTT                TTTAC AGG GTGAA                TTTACGCCTATGAAG  50 44
        prfA NONE
        prmC NONE
HF553_RS11275 NONE
HF553_RS11280 NONE
        kdsA 2312751 .. 2312772 + -10.2  -5.36441   TTTTAGCTTGTGTAG           GCCGGATA AGATAC TATCCGGC            TTTTTTATATCAGGC 100 48
        chaB 2314392 .. 2314407 +  -3.2  -4.63218   TAAACGCGGTATTAC              TCACGC GTTA GCCTGA               TTTTCTTGCCGGAAG  66 38
HF553_RS11305 2316587 .. 2316601 +  -5.7  -3.68988   CTTCAGAATATCGCG               CTCAC GCGGG GTGAG               TTGTGTTACATCGCG  60 197
        narK 2320610 .. 2320628 +  -8.8  -6.32216   TTTTGATTATCCTTT             GCGCGG CGTTAGA CCGCGC             TTTTTTTTTATCTGT 100 42
HF553_RS11325 NONE
        narH NONE
        narJ NONE
        narI 2327665 .. 2327680 +  -8.2  -5.65177   CTGTGTAAGATAAGA              CCCTGC TCCG GCGGGG               TTTTTTTATGCCTGT 100 49
        rssA 2331156 .. 2331173 +  -2.6  -3.23853   TTCTGACAGGCGCAA             GCGGCA ATACCA TGCCAC              TATTGATTAAAGCCA  45 68
        rssB 2332275 .. 2332285 +  -5.4   -4.0056   CGACGAGTGTTACTA                 TCTG CGG CAGA                 TTTATAAGTATTTGT  63 83
        galU 2333356 .. 2333374 +  -9.5  -5.96219   AATTTTTTAACAGAA             GCGCTGG TAAAT CCGGCGC             TTTTTTTTATGCCTG 100 53
         tdk 2335305 .. 2335322 + -12.7  -3.85864   GGTAAAACAAAAAAA             CGGCCTC AATT GAGGCCG              TTATTGTCATGCTAA 100 176
HF553_RS11410 2339175 .. 2339197 + -16.2  -3.36492   ACCTGTTGATTTACA           GGCGGCGCCC TAA GGGGGCCGCC           TTGTGACATTCCCAC 100 47
        oppA 2341559 .. 2341584 + -16.3  -2.80583   ACATTAATGGCAAGA         CATGGGACAAC TGCG GTTGTCCCATG          GTGTCTTTTTTCATC 100 34
        oppB 2342567 .. 2342581 +  -2.8  -3.20616   ATGTGCTCTATGCCG               TTATCG ACC CGAAAA               TTCGCTATTGATACT  45 0
        oppC NONE
HF553_RS11430 NONE
        oppF 2345542 .. 2345562 + -15.5  -4.21812   CCGTTATAATCGCAA            GGGCTGACA ATT TGTCAGCCC            TTCTTTTAGGTGAGG 100 32
HF553_RS11440 2346654 .. 2346665 +  -7.2  -3.09492   GGATCAAACAACTCC                GCGC CGCC GCGC                 TCTTCGAATTGCAAA  57 260
HF553_RS11455 2348811 .. 2348831 +    -9  -3.21595   GATCGTTACTGTCCA           CTGC-GGGC ATCG GCCCGGCAG            TTAATAATCGCCCTT  65 230
        tonB 2350179 .. 2350207 + -10.3  -2.54504   ATGTCATTCCTTCCA        CGCGTACGGTT ACAACCC GACCGTGCGCG        ATCTCTTTGGCCAGT  65 312
        ompW 2353557 .. 2353569 +  -9.1  -2.56271   GCTACCTCGCGGATC                GTCGC CTT GCGAC                ATGTTGTAGTACACG  59 323
        yciV NONE
HF553_RS11550 2364407 .. 2364422 + -11.8  -2.69188   ACGCGGCCTTAAAAT              GGCGCG GCAA CGCGCC               GTTCATTCTCCTGTT  79 60
        rluB 2365389 .. 2365418 + -10.8  -3.14931   AATCATCAGACAAGA       GG-GTTTGTGCCG GATGG CGGCGCAAACGCC       TTAATCCGGCCTACG  78 66
        sohB 2368076 .. 2368104 + -16.1  -2.56596   GATGTAAACCGCTAT        TGCCGGATGGC ATTCAGC GCCATCCGGCA        TGGATTAATCCACCA 100 34
        topA 2371389 .. 2371406 + -14.1  -5.37043   TCACTATAGTCAAGC             GGGCCGC GTAA GCGGCCC              TTTTTTATATCCCCT 100 54
        cysB 2372883 .. 2372894 +    -3  -4.20516   AATAGTTATCTTGAG                TCAA AAGA TTGA                 TTTATTCACTGGCAA  58 169
HF553_RS11590 NONE
HF553_RS11595 2373544 .. 2373569 +  -9.1  -4.88228   TCTAATCTCGTCAAA         GCCCGATAA TGCGTTAT TTATCGGGC          TTTTTCATCTTCGCT  90 238
        acnA 2376400 .. 2376430 +  -9.6  -2.84051   GAACTAAAGCCGTTT       ATCGGGCCTGCC GTAAACA GGCAGGCCCGCG       CTTTAATACCGGTGG  70 34
        pgpB 2378049 .. 2378080 +  -5.2  -3.54543   CTGATGGCGGGCGCA      TTTCCA-TTTCGCGC GAG GCGGGAAAATGGTAA      TTTAGAAGGCTGGAT  56 77
HF553_RS11615 NONE
        lapB 2379713 .. 2379740 +  -2.8  -3.64703   ATCGGCGACCAGGGC        TTATCAGGTT GTCAATCG AACCTGTTAA         TTTCCCTGCGCCGCA  50 107
        pyrF NONE
        yciH 2381340 .. 2381350 +  -5.4  -3.50555   GGGTATATCACGCAG                 GTGA TAG TCAC                 TTCCTGTTATTTCGC  57 480
HF553_RS11680 2391375 .. 2391398 +  -2.4  -5.20534   ATATATTGTTTTTTT          CGATCATTTT TTAG ATATTGATCG           TTTTTATTGATTGAT  74 403
HF553_RS11685 2392152 .. 2392174 +  -6.3  -3.63761   GCAGCCGCGTGAACA           CCCTCAG AGAATCGAA CTGAGGG           TATTTGTGTCGCTTA  62 6
HF553_RS11705 2395578 .. 2395613 +  -8.5  -3.64599   TAGCTCAGATGTGAG    CTGACAGTTACCG-AT TATTT ATACAGTAACTGTCAG    TTTACAATATCGTAA  72 201
HF553_RS11715 2397309 .. 2397325 +    -3  -5.10601   GGATTTTCGTGCCCG              TAAACC GGGGA GGTTTG              TTTTTCTAATTTTAT  73 169
HF553_RS11720 NONE
HF553_RS11725 NONE
HF553_RS11730 2398641 .. 2398660 +  -4.9  -4.87626   AACTCTCACCATAAA            GGCTGCG CATTTA CGTGGCC             TTTTTCGTATTCAGG  75 316
        pspA NONE
        pspB NONE
        pspC NONE
        pspD NONE
        pspE 2405169 .. 2405185 + -10.8  -3.80018   TACTCATACTAACCG              CGGCGC TTAAT GCGCCG              TTGTTGATCTCTCCG  85 57
HF553_RS11785 NONE
HF553_RS11790 2407750 .. 2407786 +    -5  -4.58663   GAAATGACCTTCCAC   AGGGCGCTGACTGCCTG GCTT TACGCCG-CAGCGCCCG    TTTTTCCGCCATGCT  71 34
        tyrR 2409438 .. 2409461 + -12.5  -3.28712   AAGAGTAGAAAAAAA          GAAGGCCTC CGGATA GAGGCCTTC           TTGTGACAAAAGAGC  90 33
        ycjG 2411354 .. 2411398 +  -2.8  -3.69354   CGTGAAAAGAGACGA CCCAGGCGGGTTG-GAGTCGA TGAA TTAACTGGCAAAGCGCCTGGG TTTCCGGTTCTGAGC  51 272
HF553_RS11815 2413688 .. 2413706 +  -2.3  -3.55889   GGCATGGGGATTAAG            CGAGCGCC TGAT GCCGC-CG             TTCTCATTGCTGTGT  47 100
HF553_RS11825 2415910 .. 2415932 +  -2.6  -3.60805   TTTGTTCTTATCATG           GCGTCTTTAC GAC GAAAGGGTGC           TTTAGCGTGGAATAT  50 272
HF553_RS11830 2416851 .. 2416881 + -14.1  -2.75074   ATGAACAGCTTCTAA       CACGGTTGCCG GAGCGTAGA CGGCAACCGTG       TGATATTCGCCTGGC  87 68
HF553_RS11840 2418352 .. 2418364 +  -5.5  -3.06915   CCTAATCATCCATCT                TGCCG TTG CGGTA                TTCGGTAAAGTACAT  52 97
HF553_RS11845 2418670 .. 2418691 +  -5.1  -2.92475   GCAGTTGGGAGGCCG           TGTCCAGTA TGGG TACCGGACG            GTTTCTGGGCCTGAA  50 50
HF553_RS11860 NONE
HF553_RS11865 2424436 .. 2424449 +  -3.9  -2.72314   AGGATCAACAGTGCG               TATGT CGAA ACATA                ATCTTATTATCTATA  45 51
HF553_RS11870 2425329 .. 2425351 +  -4.2   -3.8211   TGGATGTTTACCTGG           TTTTTTAGCG GAT TGCTAAATAA           TTATTATGGCTAAAA  55 93
HF553_RS11875 2425972 .. 2425984 +  -3.3  -2.78384   CGGCAATGCAGGGGC                GCAGG CAT CCTCC                TGTAGTGCCCCCACA  43 83
HF553_RS11890 2427767 .. 2427797 + -16.2  -2.78124   CCGGACAGGGAAGCC       TCGGTGCCCGATAA GCA TTTTCGGGCACCGG       CTATCTTTTATTTTG 100 73
HF553_RS11900 2429461 .. 2429471 +  -6.8  -3.04248   GGTCGCAGCGCAGAT                 GGTC AAT GACC                 TGTTCGGCCGTGTTC  54 157
        smrA 2432915 .. 2432928 +  -6.7  -3.09785   GGAGAAACAGTCATT               CGCTT ATTT AAGCG                TCTATTAAAATATAC  58 174
HF553_RS11925 2434348 .. 2434366 +  -7.4  -5.03145   ATACATGTTTGGTAA             GCGCCT GTTGCTA AGGCGC             TTTTTTCGCACGTTC  86 43
        zntB 2435649 .. 2435668 +  -7.1  -5.83822   ATTGATTCGTACGAC            GCCGGCT TAGATT AGTCGGC             TTTTTTTTGCCTGTA 100 215
        dbpA 2437324 .. 2437361 + -13.5  -3.00106   TATTAAAATGATCGA   TAGCATGGCGTCTCAGCG GAG TGCTGAGACGCC-TGCAG   ATTATTTCACTTCGA  87 30
HF553_RS11950 2442436 .. 2442457 +  -6.7  -4.00348   GTTTTGATCTCTCGT           GTATGAAAG ATTG CTTTTATAC            TTTAATTAATTCGAC  68 65
HF553_RS11955 2443027 .. 2443056 +  -9.3  -2.62613   ATGATGATGGTTGAT       TTGAGCCCGCA CTCTCTTA TGCGGGCTCGG        GTATTTAGCGTACCA  66 44
HF553_RS11965 2444630 .. 2444650 + -12.5  -3.99693   AGGCGCATCAGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTTGTTTCC 100 106
HF553_RS11980 2449065 .. 2449078 +  -3.7  -4.24002   GCCAAAGCTGAGCTC               CGGGC CGGT GACCG                TTTTACCGTTTACGC  64 336
HF553_RS11995 NONE
HF553_RS12000 NONE
HF553_RS12005 NONE
HF553_RS12010 2454472 .. 2454499 +  -5.6  -3.60792   TGTCTTTATGGATAC       CGCCGCGGCTGG AGAGAA CCA-CCGCG-CG        TTTGCCGGTTACCAG  55 201
        hrpA NONE
HF553_RS12025 2459910 .. 2459926 +  -2.3  -4.06687   AAGTGCGACCACCAT              TTCATAA ATT TGATGAA              TTATTTATAAAAGCT  55 70
        cybB 2460514 .. 2460527 +  -3.8  -3.72576   GTAAGCGTAACTGAC               CGTC CTGTAT GACG                TTTGCTACAGGCGGG  55 27
HF553_RS12065 2468117 .. 2468132 +  -3.2  -3.84514   TTAGTTTTTAACAGG              GCGTTG TGAG CGATGC               TTTCATCCTTAAGCT  54 444
HF553_RS12075 2470509 .. 2470523 +  -5.6  -3.07622   AAGTAGCCTATAACA               GGCCTC CCT GAGGCA               TTGGCTAGCATCTGT  50 347
HF553_RS12085 NONE
HF553_RS12090 2472664 .. 2472688 + -15.7   -4.5538   CGATAACTGATTCAT          CCGCCAGCGGA TTT TCCGCTGGCGC          TTTTCTGAATTTTCT 100 31
HF553_RS12095 2474460 .. 2474491 + -16.6  -4.30719   TCCTTTAGTAAGCGT      CGCGCCAGCGGGCTA TTT TAGCC-GCGGGCGCG      TTTATTCTCCGACAG 100 33
HF553_RS12105 2477082 .. 2477100 +  -3.8  -2.62184   CTTTAAAAGCGGTAA             GCTTCACA GGC TGTGAGGA             TACTGTAAAAGGAAG  44 35
HF553_RS12110 2478669 .. 2478681 +  -5.5  -3.79906   GCGTGAGGTTTACAT                CCGAT TCG GTCGG                TTCTTATCGACATAA  61 65
HF553_RS12115 2480482 .. 2480508 +  -2.2  -3.83323   ATAAGCGCCGTTATG         TTGACGATCGTA TCA TGCGTTAGTCAG         TTTGCCTTCTGTACC  51 3
        rimL 2485365 .. 2485376 +  -4.4  -4.25681   GCAGTCACAGATCCA                GACA TTAT TGTC                 TTTGTTGCCTTCAAT  66 397
        tehA NONE
        tehB 2487697 .. 2487708 +  -3.6  -3.95873   AGTTCTGTAAGTCTC                GCTG CGTT CGGC                 ATTTTTTTGTCGGGC  55 49
HF553_RS12160 2488845 .. 2488900 +  -3.9  -3.55444   AAGTAAATAAAAAAC GCCTGCGGCGGCG-GCCGCTAACCAGCG ACG CGTTGGATCGGGGTGCGC-GTC-CGGGC TTTGACAAATGGCGG  51 373
HF553_RS12170 2490398 .. 2490417 +  -3.5  -3.05384   CGCTTCTGACTACAA            TAGCCGC CATTTC GCTGCTA             TTGGATAAGAACGAC  45 66
HF553_RS12175 2492883 .. 2492898 +  -6.2  -2.80443   CCAGGGGATTGTAAG              CCATAA TAAT TTATGG               TGTGGTCAACTCTGG  53 508
HF553_RS12190 2495248 .. 2495258 +  -8.2  -2.86391   TAACCATCTGTTTAA                 GCGG TGT CCGC                 TAATCTTTACCTGCT  61 476
HF553_RS12200 2496143 .. 2496160 +  -3.5  -4.10161   AAAGCACCATAACAG             TTAGCAA ATCG TTGTTAA              TTTTAACAACTGATA  57 82
HF553_RS12205 2497686 .. 2497716 +  -6.1  -3.53855   CCTGACTAAATTTCC      CGAGTGTGCCGGGT GAGC ATCTGGCGCGC-CG       TCTATTTTTAGGAAA  60 65
        patD 2499521 .. 2499540 +    -5  -3.00022   GAGAACGTTTTGCTG            TCAAGGCT GATA AACCTTGA             TGTGTGTCAAATAAA  51 340
HF553_RS12220 2500012 .. 2500029 +  -2.6  -3.85817   CGAACGCGGTGTTGC             GGCGAA AATGGC TGCGCC              TTTCTGAACGCGGCT  52 259
HF553_RS12240 2507197 .. 2507210 +  -4.5  -3.14051   TGGTTCATCAGCAGG               CGTCCG GAG CGG-CG               TGTTCATCAAGCTGG  50 487
HF553_RS12255 2509238 .. 2509258 +  -7.6     -2.55   CTTTTTTACAATTAA            GTTCCGAA ACTTC TTCGGGAC            TCGATTGCGATGTTG  57 297
        mcbR 2509984 .. 2510016 + -13.5  -2.61322   TCATGAAACTATGAC      TTATCAATAGCGGGG GCT CCCCGCTATTGACGG      ATATTTGCCGGATAT  86 44
HF553_RS12270 2513485 .. 2513506 + -10.1  -2.80821   CTCTGTAAATAGGGT           ATGGAGGGG GAAA CCCCTCCAG            TCATCTCTTTAAACG  71 33
HF553_RS12275 2513851 .. 2513861 +  -2.4  -3.01712   CTGACTAAGCATTGG                 GCGC GAT GCGG                 TGTTGGCGGCAACGC  42 33
        steA 2516712 .. 2516726 +  -5.7  -4.79949   ACGTACCTCCGGCGC               GACAG CCGGC CTGTC               TTATTTTTTTCAAAA  76 179
        nhoA 2517765 .. 2517795 +    -6  -3.30441   AAACAGAATGATCGC       CTGGCCGGAGATGG TGA CGTTTTCCGGCTGG       TTATCGCGAATGGTG  54 103
        smvA 2529710 .. 2529724 +  -4.2  -2.82742   CAACGACCAGTGAAC               GTCTGC ACG GCATAC               TCCTTATGACCGAGT  45 483
        fdnG NONE
        fdxH NONE
        fdnI 2537186 .. 2537211 + -14.1  -4.38171   TCGCGATCTGATAAA         CAAGGCGCTAT CCTC GTAGCGCCTTG          TTTTCATCTGCTGTC 100 46
HF553_RS12385 2541831 .. 2541862 +   -11  -3.15638   GCCTGATAACCTCGC      CAGCCCGGTA-ACGA CTC TTGTTTATCGGGCTG      TTGAATATCGCTTTT  78 35
        hdeB 2544739 .. 2544756 +  -6.2  -4.53036   AAACTGATATCAAAA             CCCGGC CTGTGT GTCGGG              TTTTACTATTTGTGA  76 45
HF553_RS12405 2545718 .. 2545728 +    -4  -3.24926   CGTAAAAATTAGCCC                 CATA GTC TATG                 CTTGTTTTTCGGATG  48 96
        treZ NONE
        treY NONE
        glgX 2552243 .. 2552259 + -10.8  -5.14965   GCGCTCCGGACCCAA              CCGGCC TTGAT GGCCGG              TTTTTTACTGGCGCT 100 51
HF553_RS12440 2558149 .. 2558165 + -10.1  -5.28176   AACCTACGCGACGAA              CCGGTCA CAG TGGCCGG              TTTTTTATGCCTGCG 100 303
HF553_RS12460 2560991 .. 2561005 +  -4.2   -3.3334   GAACGCGTCATTGAG               GTCAAC ATT GATGAC               TTATAAGCTGGCATT  50 5
HF553_RS12465 NONE
HF553_RS12470 2561547 .. 2561578 + -12.6  -4.72497   GATGCTTATTCTCGT      TAAAACCGGTAGCAT TAT ATG-TACCGGTTTTA      TTTTATTCATCCCTG 100 39
HF553_RS12485 NONE
HF553_RS12490 NONE
HF553_RS12495 NONE
HF553_RS12500 NONE
HF553_RS12505 2570233 .. 2570260 + -17.1  -3.90744   ATTTACGGCAAGCTC        CACCGCATGGC ATATCC GCCATGCGGTG         TTATTTACCGACAAA 100 40
HF553_RS12520 NONE
HF553_RS12525 NONE
        cybH NONE
        hybD NONE
        hypC NONE
HF553_RS12545 NONE
HF553_RS12550 NONE
HF553_RS12555 NONE
        hypA 2580057 .. 2580070 +  -6.7  -4.11751   TCTGTATTAGGATTC               GATGG GTTG CCATC                TTTTAGCAGATTGAT  70 218
HF553_RS12570 2582400 .. 2582426 +    -8  -3.06183   TTTGCTCTTCAGGTT         ATGGCGCAGA TGAACAT TCTGCGCCAG         TTAAGTCGAGCTCAG  62 43
HF553_RS12595 NONE
HF553_RS12600 2589043 .. 2589057 +  -4.2  -3.40403   TTGCTTTTCGCTTCC               GGCG ACTCATG CGCC               TTCTGCTGCGGGAAA  51 433
        marR NONE
        marA NONE
        marB 2590694 .. 2590712 + -12.4  -5.52986   CACCTTTAACCTCTT             TGCCCCGT TTT GCGGGGCA             TTTTTTTAGTACCGT 100 32
        ydeE 2593106 .. 2593119 +  -3.8  -3.49618   ATTACCCCTACGCAG               CAGG CTATCA CCTG                TTAATTATCTGCAGC  52 8
        mgtS 2593491 .. 2593525 + -16.5  -4.55287   TAATCCCTCGCAGAG    CCGGCCCCTTGCTGCA TCGT TGC-GCAAGGGGCCGC     TTTTGTCTGGATGGC 100 51
HF553_RS12645 2595304 .. 2595322 +  -5.2  -5.03145   ATTTCCGTCCGCCAC             TGTGGCTA TTC TGGCCACC             TTTTTTACCCGCTTC  82 171
        ydfG NONE
HF553_RS12665 2599566 .. 2599576 +  -4.6  -3.41126   CCCCTTTAACGTCGG                 GGTG AGA CGCC                 TTCTCCGCTTTCTCA  52 43
        ydfZ 2599966 .. 2599988 + -17.8  -3.10245   AACCGCTCCGGCCTT           CCCGGTAGCA TAA TGCTACCGGG           TCTCTGTTGCGCTAC 100 58
HF553_RS12700 NONE
        speG 2606827 .. 2606863 +  -7.3  -2.88023   CCACCGCGCAGTAAG   CGCGGCGCGGTAGTCAC GGAGA GTCGC-ACCGCGCC-CG   GTTTAGTAGTAATCG  59 27
HF553_RS12715 2608033 .. 2608045 +  -6.3  -3.14132   AACGCTCTTTGACAT                GGATT AAT AATCC                TTACTCCCAAAGGGG  57 70
HF553_RS12720 2610586 .. 2610601 +  -3.2  -4.56597   CGAAAAAATCTAAGC              CG-CCTG CTC CGGGACG              TTTTTACGCGCCCGG  64 28
HF553_RS12725 NONE
        dmsB NONE
HF553_RS12735 2614612 .. 2614629 + -12.7  -2.78349   CAGGTTAATTTATGC             GTGCGGG GCGA CCCGCAC              CTTTCGGGATTGTTT  82 33
        dmsD 2615273 .. 2615290 +  -8.4  -4.43859   TTAATCCCCACAAAA             GGCAGG ATTTTA CCTGCC              TTTTCTCCCATTGTG  84 37
        osmY NONE
        osmX NONE
        osmW NONE
        osmV 2619074 .. 2619084 +  -6.8   -4.2349   ACGCAATATTATATC                 GCAC ATA GTGC                 TTTTGCGTCTGACGC  72 87
        clcB 2620833 .. 2620844 +  -2.2   -4.4846   TTATAGGACAGCTAT                GC-GC GAC GCTGC                TTTCTTCTTCGCTTA  62 421
HF553_RS12785 2624844 .. 2624876 + -11.3  -2.90496   GCCTGAAAAGAAATA      ATCCGGCGATAGC AACGTGC GCTATCGCCGGGC      TGGTTTCACGCCACA  78 35
HF553_RS12790 2625495 .. 2625513 +  -8.1  -4.57569   AGTCGTAACATGCTG            C-GGCGCG CCCC CGCGCCCG             TTTTTACGGCGCTAA  82 40
HF553_RS12795 2626579 .. 2626599 + -12.6  -2.62263   GGATTAATGCGGGAA            TCGCTGCC TGACC GGCAGCGA            TCGTCTCAGGCAAAT  81 34
HF553_RS12815 2628793 .. 2628822 +  -4.1  -4.36914   GCAAGGGAAGAAATC       CCCGGGAGCATAG ATAA CGATGTGACCGGG        TTTTCTGAGCGCAGC  64 83
HF553_RS12830 2633346 .. 2633357 +  -5.8  -3.30124   TTCTCGCCGGATGGC                GGCA TACC TGCC                 TTATCAGGCCTACAC  56 62
HF553_RS12835 2635354 .. 2635369 +  -6.8  -3.73224   TCAATACGACGACCA              GC-GCCC CCA GGGCAGC              TTTAATCACGAGTCC  62 389
        rstA 2636284 .. 2636306 +  -9.1  -3.01712   CTTTATTAAGTCATA           GTGGCGATG CTCAT CACCGCCAC           TGTTCAAAAAACAGA  68 64
       ompS2 2637898 .. 2637916 + -17.4  -5.47846   ATTAACTCTTCTCAA             GCCCGCCG TTT CGGCGGGC             TTTTCTTTTTTCATT 100 47
HF553_RS12855 2639768 .. 2639819 +  -3.7  -2.75826   AAGCCTGCTTTTATA AC-CCACCAGCGGCGCTGACGGGAAA TCT TTTCCCC-CAGCGCCGC-GATAGAGC TAATGTATTGAGATC  45 58
        rstB 2641183 .. 2641198 +  -2.6  -3.25102   GAGCGGCGGGAACTG              TGCTAT ACAG ATAGTA               TGTTGTAACTAAAGT  45 60
HF553_RS12865 2642236 .. 2642260 +  -8.5  -4.07535   GGTATCCTAATGCCA          CGGCTGAGGCT TTG AGCGTCAGCCC          TTCTTTATGCGCCTT  77 108
        manA 2646800 .. 2646821 +   -13  -4.38116   AGACGTAAAACTCCT           CCAGGCGG TTTAAT CCGCCTGG            TTTCATTTTTATGGA 100 83
HF553_RS12885 2648386 .. 2648409 +  -5.2  -3.12352   GCGACGCTGCACCCG          GTCTGCGC CGAACGAC GCGCAGCC           TCTACTTTTGCGTTA  51 58
         add 2650132 .. 2650167 +  -7.6  -3.06133   GAGAAATGCGACATC    TCAGGCAAGACACAGCG TCG CGCGATGTTTTGCC-GA    TTCCATGCCCAGTTC  60 99
         blr 2651711 .. 2651738 +  -2.6   -5.3472   ATATTCCCTTTTTAC        CTGCACCCCTGA CCTC TCACTGGTGCAA         TTTTGTTTATTTTTT  79 231
        ydgT NONE
HF553_RS12920 NONE
        rsxA NONE
        rsxB NONE
        rsxC NONE
        rsxD NONE
        rsxG NONE
HF553_RS12950 NONE
         nth 2659162 .. 2659175 +  -5.3  -3.80114   AAATTCTATCTATCC               GTGAT CAGG ATCAC                TTTGATAACTTCATG  59 192
        dtpA 2661125 .. 2661147 + -13.5  -6.17184   GGAAACAACATTCAG           GCCGCTAAC TGTGC GTTAGCGGC           TTTTTTTTTGCTCGT 100 48
        gstA 2661819 .. 2661854 +  -4.5  -4.57073   CTGAATTAATGTCAT    GTTGCCGGATAGCTC GCTGTA GCGCCATCCGGCCTC     TTTTTAGCAGCAATA  69 32
        slyB 2667480 .. 2667504 +  -3.6   -3.5774   CCAACGTGCGTACCA         GCGAT-GGC TGCTCAAT GCCTATCGC          TTTAGCCAATTGAAT  51 321
HF553_RS13005 NONE
HF553_RS13010 NONE
HF553_RS13015 2671056 .. 2671076 +  -5.3   -4.3665   GGACATGTTATCGCC            GCCCACATG GAT CATGAGCGC            TTTATCTTTCACTTC  69 76
HF553_RS13035 2673457 .. 2673476 +  -4.2  -5.41941   AGACCATCATTGCAA            CGCCTG AGCAGTAA CGGGCG             TTTTTATTTCCTTTA  83 12
HF553_RS13040 2674636 .. 2674657 +  -7.3  -2.97058   CTGTAATTTCATTGA           TAGCGGC CTCACATC GCCGCTA            TACTTTGAATATCTT  59 35
        gloA 2675108 .. 2675135 + -14.8   -4.2828   GGGTAACTGATCCCC        CGCCGGGCGCAG GTCA CTGCGCCCGTTG         TTTTACTGCATCCCG 100 31
         rnt 2676234 .. 2676253 +  -7.9   -5.1101   CAGGAGAATCGGGTT            TTCAGCG ATCTGG CGCTGAA             TTTTTTCGATAGTGG  91 409
HF553_RS13060 2677435 .. 2677463 + -13.3  -4.20868   ACAATTCGCTAATAT        TTTATCCTGTCGT TTA ACGACAGGATAAC        TTCTTCTTTTGCGCC 100 29
        sodB 2678149 .. 2678170 + -14.5  -4.07885   GCATAAGTCTGAGTA           CGCAGAAGG TACG CCTTCTGCG            TTTTAGAGAGGGATA 100 35
        purR 2679712 .. 2679733 +    -5  -3.71672   CCAAATAGTCCAGCA           GCCATGCC AGCGCG GGCGAGGC            TTCGTTTTGCTGCCA  58 105
HF553_RS13085 2682078 .. 2682097 +   -10  -2.91276   ACGTCGGATAACTGG            CTCACGGA ATTG TCCGTGGG             ATTTCTCACAAAGCC  72 224
         cfa 2683323 .. 2683345 + -13.4  -2.82253   TCCTCGCTAATCATC           ACCCCCGCAT TTC ATGCGGGGGA           ATCTTATTTTCCGTT  85 31
        mdtK 2685599 .. 2685618 +   -10  -4.39828   GCGATAATACGACGA            TAGCCGTC GCAT GGCGGCTA             TTTTCTCGACATGTT  87 34
HF553_RS13105 NONE
HF553_RS13110 2686322 .. 2686332 +  -6.8  -3.17392   ATAGCCAAGACAAAC                 CGCA ATA TGCG                 TTGGATTACGCACTA  56 442
HF553_RS13265 NONE
HF553_RS13270 2711541 .. 2711556 +  -3.2  -2.78438   ATGATATAGTAGAAT              CCCCTT ATTT AACGGG               CTTTACCATGTCGTA  43 181
HF553_RS13275 2712298 .. 2712309 +    -3  -3.34506   CACACTATAAGCGCT                GAAA TAGA TTTC                 TTCCTCTCATTCTAT  46 31
HF553_RS13280 2713855 .. 2713872 +  -7.7  -5.00616   ACGTTGTTCGTATTC             TGGTCTC TGGC GAGGCCA              TTTTTTCGAAACGCC  91 457
        ttrB NONE
        ttrC NONE
        ttrA 2721434 .. 2721447 +  -2.3  -2.73067   TCATTTGGGGTTACT               TCCGG TTGA CCGCA                TAATCTGTGATTGAA  40 263
HF553_RS13315 NONE
HF553_RS13320 NONE
HF553_RS13325 NONE
HF553_RS13330 2725844 .. 2725865 + -14.4  -3.28712   CCCACTGTTGCGCAA           CGCCGCCC CTGTTC GGGCGGCG            TTATCGCCAGCGACA 100 58
        pykF 2727658 .. 2727672 +  -8.5  -5.99154   AATTTGTTTAAAAAA               GCGCC CTTCC GGCGC               TTTTTTTATTTAATC 100 58
         lpp 2728193 .. 2728211 + -14.6  -5.75342   CCTGCGTAATAAAAA             TGGCGCAC ATC GTGCGCCA             TTTTTTTTACCCACA 100 46
HF553_RS13345 2728517 .. 2728535 + -14.6  -4.41616   ACGCACGATATAAAA             TGGCGCAC ATC GTGCGCCA             TTTCTTTACCCACAT 100 45
HF553_RS13350 2728820 .. 2728870 + -15.1  -3.72695   CATCTGTAAATAATT TGACGCACAATATAAAATGGCGCAC ATC GTGCGCCATTTT-T-TTGTCCGTCG TTTGCTGCGAAGGCT 100 28
HF553_RS13390 2737584 .. 2737596 +  -6.2  -3.30124   GTAACATAGCCGGAT                GGCG GCTAA CGCC                TTATCCGGCCTACAC  59 277
        rprA 2743154 .. 2743175 +  -9.5  -5.21709   GTCGAAACGGTGTCG           GTGGTGCTA TTTA TAGCATCAC            TTTTTTCATATAAAA 100 146
HF553_RS13420 2743685 .. 2743695 +  -5.4  -2.62616   CGTTCAGGCGGCATC                 TCTG AGT CAGA                 TAATATGAAAAATCG  50 151
HF553_RS13425 2745141 .. 2745157 +  -5.1  -3.34239   TCAATGCAATAAACC              TGGCATT TTA AACGCCA              TGTTATGTACATATA  54 255
HF553_RS13430 NONE
        ydiB NONE
        aroD 2748312 .. 2748322 +    -4  -3.33696   GTTATCTGATATGAA                 TATG TTC CATA                 TTCATTGAAAGCCGC  50 91
HF553_RS13445 NONE
HF553_RS13450 2751175 .. 2751222 +  -7.9  -2.54801   AGGATCGTACCGGAA C-GTCTTATTCGGCCTGACTGCT TTAC GGCA-TCAGGCCGAATAAATCAG ATATATTTCGCCGTC  59 40
HF553_RS13460 NONE
HF553_RS13465 NONE
HF553_RS13470 NONE
HF553_RS13475 2755956 .. 2755986 + -11.3  -3.53091   TGACGCTCTGAAACA      CCGGATAACGACGC TACG GCGTC-TTATTCGG       TTTGCCCCCGGAGAT  85 38
        fadK 2757668 .. 2757718 +  -3.9  -3.73068   AAGGAGCACACCGCG GTA-TAAATTGCCGGATGGCGACG TTAA CGCCGCCATCCGGTATCACACTAC TTCTTCAGTTCCGCC  55 20
        ppsR 2761260 .. 2761271 +  -4.4  -3.80516   TAACCGCAGGATGTA                CTAG CAAA CTAG                 TTTAATGGGTTGGTT  58 22
        aroH 2762471 .. 2762493 + -15.6  -4.21631   CCGCTTTTAATAGCT           CGCCCATCCT GCC GGGATGGGCG           TTTCTTCGATGCGTT 100 31
        hemP 2762813 .. 2762848 +  -3.1  -2.52676   ACTGTTAACCAAATA    ACGTTCCGCCAGCAG ACGATG CTGCTGGCGTCAGGC     TAACTTGAACAACTG  42 25
HF553_RS13580 2778559 .. 2778575 + -15.1  -5.08483   GATAAATAAGTTATA              CGGCGGC AAT GCCGCCG              TTTTATTTAGTTTTG 100 32
HF553_RS13600 2781518 .. 2781549 +  -6.6  -3.16961   AGGCGTCACCACGGA      AT-AACCGGGTTACG TAA CGTAACCCGGTACAA      TATTACATCTTATAG  59 40
        pfkB 2783577 .. 2783592 + -11.8  -3.01791   AAAATCGGTTAACGG              GCGGCG CATC CGCCGC               TGTTAAAAACACAGT  81 71
        ghoS 2783943 .. 2783953 +  -4.6  -3.50466   CCGCCGCGGCGCGTC                 CGCG ATG TGCG                 TTAGTTCGTATTTTT  54 50
HF553_RS13620 2784896 .. 2784918 + -12.1  -4.81851   TATAGGTACAGCCCA           TGCCGGATA CGGGC TATCCGGCA           TTTTTCAGTTTACAT 100 36
        hxpB 2786314 .. 2786338 +  -7.8  -3.53012   GTCAACGGGCAATTA         GCCGCTGAGCC AGAC GGCA-AGCGGC          TTTGACAGAGACAAA  67 58
HF553_RS13635 2787042 .. 2787053 +  -4.4  -3.30038   CGCCAAAGTCATTTT                TGGT ATAA ACCA                 TTCCATTTGAATATA  52 49
        tcyP 2788610 .. 2788640 +  -9.8  -5.84381   AAAATGTCTGTCACT       AAAAACGCCGGT CTCCAGT ACCGGCGTTTTG       TTTTTTTCTTAGTCA 100 89
        katE 2791704 .. 2791715 +  -5.8  -3.97947   CCGGATGACACATCA                CCTC CAGA GAGG                 TTTCTCCTCGATGCG  65 221
        nadE 2798521 .. 2798547 +  -3.7  -2.80821   GTACTTCTACTGTTG         TGCCGGATA TCGCTCGTC TATCCGGCC         TCCTCTCTTTCCAGC  45 43
         cho 2799586 .. 2799599 +  -3.8  -4.36127   TGCGGAAAGTTATTC               TGCC GCAGCA GGCA                TTTTACCTTCTTGCG  64 106
        xthA NONE
HF553_RS13735 2808328 .. 2808345 +  -4.1  -3.53012   ACATTCACCTGAATA             TCAGGAC GACT GTTCTGG              TTTGCCAGCCCGACC  51 184
        gdhA 2810031 .. 2810053 +  -7.6  -5.41143   TTATTCGGTCTGACG           GCCTGTCTCC TCA GCAGGCGGGC           TTTTTTTGCCCGCTC  95 70
        sppA 2815729 .. 2815769 +  -8.3  -2.79276   GCTTCATCAATAGCC  ATACCGGATGGCGGC GTCTGCTCATA GCCGCCATCCGATAA  TCATTAATACGTCCT  64 42
        ansA NONE
        pncA 2818006 .. 2818018 +  -5.5  -5.10033   CTGCCATAGCATCAC                CAGCT GCA GGCTG                TTTTCTTTCTGTTCC  82 524
        gapA 2819955 .. 2819972 + -11.3  -5.95166   CACAGTCATTGGTAA             GAGCGAC TCAG GTCGCTC              TTTTTTTTGCTTAAA 100 51
HF553_RS13795 2821186 .. 2821234 +  -3.1  -4.37886   CTATAGGATCTGAAA GGCGTCAGC--CGCCATCAGGCA TGACC TGCCGGATGGCGGCGCTTACACA TTTTATCCGGCGTCA  62 63
        yeaG NONE
HF553_RS13820 2828211 .. 2828235 + -12.9   -4.1673   GTGCATAACCCTAAA          CCTGCCCGT TGTTATT ACGGGCAGG          TTTATTAGCAACTTA 100 33
HF553_RS13830 NONE
HF553_RS13835 2831122 .. 2831136 +  -2.8  -3.06796   TTTTTCACGTAGAGA               TTGTCT TTC AGGCAG               TTGCCTGAAATCCGC  43 220
HF553_RS13845 2831695 .. 2831716 + -17.3  -5.03715   CGCCCGTCAGATACT           GGCCTGGGG TCTG CCCCAGGCC            TTTTTTAAACATCGT 100 43
HF553_RS13855 NONE
HF553_RS13860 2834327 .. 2834339 + -10.5  -3.91716   CCGTGACCAGCCACA                GCGCC CGA GGCGC                TTCTTTCGGCAGTAA  80 148
        yoaK 2835205 .. 2835235 + -14.3  -2.90219   TAAATTCATTTTGAA       TAATAAAGGCTAC CTGTC GTAGCCTTTATTA       TCTCTGAAAGTTCTG  89 115
HF553_RS13915 2839559 .. 2839583 + -12.1  -3.41693   TATGAAGGGTATAAA          CAAGGGAGGGG TTA CTCCTCCCCTG          TTCGTTAATAATGCA  85 233
HF553_RS13950 2844672 .. 2844693 + -12.3  -2.52464   TCTCTGCCGACAATA           CCGGGAACT CATG GGTTCCCGG            TGCGTTAACGGCGAC  81 43
HF553_RS13980 2850527 .. 2850544 + -14.1  -4.90296   CAATAACAACAGTAA             GCCGGCG ATGC CGCCGGC              TTTTTATCCCATTTT 100 35
HF553_RS13985 2851252 .. 2851277 + -14.1  -2.64194   GGCATTATTATTCCA         GCGCTATCGGT TTCG ACTGATAGCGC          CTTATACCGTTTGTA  87 81
HF553_RS14010 2854607 .. 2854635 + -14.7  -2.73721   GCTAACTAACCTTAA        GAAATGCCTGAAG GCT CATCAGGCATTTC        TACTTCAACCTTCCT  89 32
        pagD 2857522 .. 2857542 +  -3.9  -4.47707   TCCGGAAATCTTGAT            TGCCATCAA ATA TAGCTGGCA            TTATTTTTCCTGACG  66 83
        cspF 2857967 .. 2857980 +  -2.3  -4.45261   CTTTTATCATATATC               GGGTA TCCC TCCCC                TTTTCACTTTGTTTA  61 184
HF553_RS14035 2858935 .. 2858952 +  -4.9  -3.85698   GTAAAAAGGAAATGG             CGATGTTC GTC GAAC-TCG             TTTATGACAAGCGAA  59 214
        msgA 2859214 .. 2859231 + -12.7  -2.89191   ATGTCCGATCGAAAA             CAGCGCC CTGA GGCGCTG              TCTGTGACGATATAA  82 63
        cdtB NONE
HF553_RS14050 2861504 .. 2861514 +  -2.4  -4.14739   AAACAAATGATTCAT                 TCGC CTG GCGC                 TTTTCAGCTAACTCC  56 220
HF553_RS14295 2897607 .. 2897623 + -12.3  -6.11644   GAAAGCGTCGACAAG              GCCACCA TTA TGGTGGC              TTTTTTTTTGACTCA 100 43
HF553_RS14300 2898002 .. 2898021 +  -4.9  -3.53811   TTAATGCAAAGAAAA            GCGCCAT CACCCA ACGGCGC             TTTAAGGGAAATGAA  56 47
HF553_RS14310 NONE
HF553_RS14315 2900137 .. 2900184 + -10.7  -3.78235   AACTTTAAAGCGTAA TTGCTCTGCATTAAATCCCCG GCGCCG CGGGGATTTATTGAAGCGTAA TTCTGTTAATTATCG  85 26
HF553_RS14320 2901047 .. 2901069 +    -4  -2.71364   AGTTTCTATCGTTGA           TGAGTGTGGC CAC GCCGCACAGA           TAATTACGGCGCTGC  45 260
HF553_RS14335 2902226 .. 2902238 +  -3.3  -3.26546   GATGATATGGAAAGA                GCAGA AGA TCAGC                TTGCTAACTTTGTAA  46 164
HF553_RS14345 NONE
HF553_RS14350 2904415 .. 2904434 +  -9.2  -4.12603   AGGAGGTAATAAAAA            CGGGAACC CTTC GGCTCCCG             TTCTTGTTTAATCCA  80 95
        rluE NONE
HF553_RS14365 NONE
HF553_RS14370 NONE
        mnmA 2908514 .. 2908563 +  -2.8  -4.93877   GGTCTGATTATTCAA TACACAACACCATTCAAGTCGC CTCAAA GCGGCTTAAAAGATGAAGTGTA TTTTATTTGATACAA  70 34
        hflD NONE
        purB 2910616 .. 2910644 + -12.6   -2.7955   TAAATAATGCCTGCC        TCACCCTCTTTT CTTCA GAAAGAGGGTGA        CTATTTGTCTGGTTT  82 34
        phoP NONE
        phoQ 2912878 .. 2912893 +  -4.7  -2.90723   GAATAAACATTTCTG              TGCGT TCTTCC ACGCA               TCTCGTTAAGCATCC  48 35
HF553_RS14400 2914400 .. 2914415 + -10.4  -4.34263   ACAACACCATGGATA              CGTCGG ACTG CCGACG               TTTATATTCTTCCAG  90 355
        potA NONE
        potB 2918948 .. 2918973 +  -6.3  -2.53263   ACACGCATCCAGGCA         TGAAGTTTATT CAAG GGTAAACTTCA          TGCCTTCGGCATAAA  53 62
        sifA 2920432 .. 2920445 +  -6.7  -2.83867   TAAAATTCGCGGCTT               CAAGC GGCA GCTTG                CTTCTTCCTGGCTGC  56 207
        potC 2921335 .. 2921351 +    -5  -2.71011   CTCGTGATAAAACCA              AGGGCC GATAA GGCCCG              TAATTCAGGGGACGT  49 15
        potD 2922579 .. 2922589 +  -4.6  -3.06831   CTCTTCAAACTCGCT                 GCCG ACC TGGC                 TTGGCTCAAGATTCA  47 188
         mfd 2931204 .. 2931232 + -10.3  -2.85069   ATTGCATAAGCGTCA       GGCCGGGCGTCA TTACTC TG-CGTCCGGCC        TAATCTTTACAAATT  72 32
HF553_RS14470 2932330 .. 2932363 + -12.5  -5.18726   GAATAGCTGACTGAC     AAAAAAGCCTCGCGA TGCA TCGCGAGGCTTTCTC      TTTTTATTGTGGCAA 100 45
        comR 2933566 .. 2933592 +  -7.9  -2.52896   CTTCGGATAAAAAAA         GCCCCTCAGCC TGAGC GAATGAGGGGC         TAACTTGCAGAGTAC  59 50
        fhuE 2942243 .. 2942260 + -12.7  -3.44146   GCGCCATTAAAAAAA             GGCAGCC GAAT GGCTGCC              TTAATTCTCCCCAAC  93 67
         maf 2955662 .. 2955686 +  -8.5  -3.77196   ATCACACGATTGTAG          GCCTGATAAGC AAC GCGCATCAGGC          TTTACTACGTAATAC  75 89
         rne 2960436 .. 2960453 + -12.7  -5.25803   AAATGCTGATACAAA             GCCGACC GCCA GGTCGGC              TTTTTTATGCCCCTT 100 44
        flgA NONE
        flgM NONE
        flgN 2972199 .. 2972226 + -10.7  -2.64472   CCTGAATGCCTTGTA        G-GCCTGATAGC ACAGC GCTATCAGGCAC        TGAATTTACACCGTC  74 74
        mdtH 2977686 .. 2977708 +  -5.4  -2.86492   AAGCGCACGCCACGC           CGGATGCTGG AAC CCGGCGCCTG           ATTTGATACCTGTCG  51 2
        grxB 2978430 .. 2978452 + -10.6   -4.7657   ATCTAACTCCCGCCA           GGCGGCAA CCCTTTC TTGCCGCC           TTTTTCAGCTTTTTC  95 35
HF553_RS14715 2979113 .. 2979128 + -11.8  -5.47218   CCAATTGATTTCGGA              GGGCGC GCTC GCGCCC               TTTTTTTACGTGCAA 100 33
        pyrC NONE
        dinI 2980601 .. 2980616 + -11.8  -5.63517   CAGTGATGTATGTTT              GCCGGG TCGC CCCGGC               TTTTTTATTTGCGCA 100 52
        bssS 2981142 .. 2981157 + -10.4  -2.73799   GCTCCCCCTCTCTCA              GGCACC GTAA GGTGCC               TCACTTATTTCTGGC  71 49
        solA 2982355 .. 2982373 +  -9.5   -4.1822   TAGCCAATAATTTGT             CGGCCCC GTAAA GGGGCTG             TTTATTAAGGTAAGC  84 31
HF553_RS14740 2982594 .. 2982604 +  -4.6  -3.28791   TAATGCCAACTCCTG                 CCGT TGT GCGG                 TTATCAGGGGGAAAT  52 116
HF553_RS14745 NONE
HF553_RS14750 2984158 .. 2984169 +  -2.2  -4.67904   TGGATAAACAGCAGA                TGGC AACC GTCA                 TTTTTGCAGTTGGTA  65 273
HF553_RS14760 2986160 .. 2986179 + -12.2  -4.69464   GCGCTATTGACAGGA            TTGCAGCC GTCA GGCTGCAA             TTTTTCCCCTCTTTT 100 31
        mdtG NONE
HF553_RS14770 2988233 .. 2988251 + -10.3  -4.62783   ATTTCACTATAAAAA             TACCGGC ATCAC GCCGGTA             TTTTTCACCTCACTC  91 279
        mdoC 2993839 .. 2993869 +  -8.2   -4.4448   CCGCCAACCGTACCA       GAACTCGCTGCCAG AAA CGTGTAGCGGGTTC       TTTCTTTAACACTTT  83 86
        csgD NONE
        csgE NONE
        csgF NONE
        csgG 3000758 .. 3000778 +   -14   -5.4251   GATGAATACGACAAA            GCGTGGGG AAGAA CCCCACGC            TTTTTTGTCTATGGA 100 39
HF553_RS14845 3001467 .. 3001487 + -12.5  -3.95309   AGGCGCATCAGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTATTTTGT 100 106
HF553_RS14870 3004753 .. 3004772 +   -10   -4.9755   ATATTTAAGTTGAGA            GCCTGTAC AGAA GTACGGGC             TTTTTGCTTATATGT  93 40
HF553_RS14875 3004993 .. 3005008 +  -6.8  -5.51402   ATGCTGCATAAAGAA              GCTCGT ATAA ACGGGC               TTTTTTTGCATCTGT 100 96
HF553_RS14880 3006567 .. 3006577 +    -4  -4.67641   TACAAAATCAATAAC                 TTAC AAC GTAA                 TTTTGGTTTTACCCT  69 261
HF553_RS14890 3008680 .. 3008695 +  -4.6  -2.87468   TGGAGATGCTGCCGG              GGCTGG TAAA CTGGCC               TATAATGTAGTGAGA  48 427
HF553_RS14895 3009466 .. 3009477 +    -3   -3.3506   ATTTTAATGTTGGTG                GATA ATGG TATC                 TTATGAAACTTTCAG  46 193
HF553_RS14900 NONE
HF553_RS14905 3011712 .. 3011722 +    -4  -3.33492   TAGTATATTATATTG                 TACA ATG TGTA                 TTATGGAGTCACTAA  50 443
HF553_RS14910 3012458 .. 3012474 +  -3.7  -3.25946   ACGACTGGAAGCAAA              CCAGA ACCTGCC TCTGG              CTTTCTTTGGCATAA  47 479
HF553_RS14925 3013823 .. 3013836 +  -2.4  -5.41746   CGCCTGGCTTTCATG               CACA AGAAAG TGTG                TTTTTTTGCCCGCTT  81 483
HF553_RS14950 3019470 .. 3019491 +  -8.7  -4.24948   CTGGGCATCACCATT           GGTGGAGCA TAAA TGCTCTGCC            TTTTACATCTCATGA  80 199
HF553_RS14955 3021288 .. 3021325 +  -4.3  -3.90707   GTCATAAGTTGGCAA   CGCGATGTAAATA TTCCCCCTCCTT TACTTACATCGCG    CTTTTTTTCATGCCG  59 184
HF553_RS14960 3022530 .. 3022553 +  -2.2  -2.63631   TCAACCCGGAACGCA          CGCCGCGCGG CAGG TCGCATTGCG           TAATATCGCCATTGA  38 259
        putA 3029992 .. 3030009 +  -9.1   -4.7373   ACTGTGGTTAATTAA             GGCTCCG TCAA TGGAGCC              TTTTTACTCGCGTCA  90 42
HF553_RS14980 3030624 .. 3030641 +  -3.4  -4.84527   CCCGCTGTGCACCCA             TCCG-GC AATCA GCGCGGA             TTTTTCATCTATCAA  74 220
        wrbA NONE
HF553_RS15000 3032595 .. 3032633 +  -3.7  -4.09511   GAACGTAAAAACGTA  TAACACAAACGCCCCCGC CTGC GCGGGGGCATACG-GCTA   TTTTGCGGCAGTGTT  59 23
        cbpA NONE
        cbpM 3038900 .. 3038927 + -14.9  -2.78679   GATAAAGGCAATAAA        CCGAGGGTGGGC TTTCT GCCCACCC-CGG        ATTTACATGCACCCG  89 46
        iraM 3040257 .. 3040279 + -17.8  -2.64803   TCGCCAAAAGCATAA           CGGGCTGACA TCA TGTCAGCCCG           TGGGTTTACCCCTGC 100 387
        hpaR NONE
        hpaB NONE
HF553_RS15100 3052453 .. 3052485 +   -12  -2.50443   GAAGATTTTTATTCC      CGCCGCGATGTTTG CTCGC CATAAATCGCGGCG      ATTAATACAATCTAA  79 100
        hprR NONE
HF553_RS15115 3055325 .. 3055338 +  -6.7  -3.35798   TGTTCCCCTTCCCTG               CCACA GGGC TGTGG                TTATCAATACAACCT  61 56
HF553_RS15120 NONE
HF553_RS15125 3057601 .. 3057613 +  -7.7  -3.15503   TCACATCCTTTTAAA                GGGTT GTT AACCC                TGTTGAATGTTCCCA  64 471
        sopB NONE
        sigE 3059820 .. 3059838 +  -2.4  -4.84527   TCCTCTTTCTCATTT             TGCTCT GTTTGCG GGAGCA             TTTTTAGTGTGTAAG  72 144
        pipB 3061300 .. 3061316 +  -3.1  -3.27774   CTAAAAACACTATTA              TTGTTTA ATT TAAATAA              TTCATAATTGCAGTC  48 201
        pipA 3062132 .. 3062153 + -14.5  -4.04806   CGCCCAAAAAACAAA           GGGGTTACC TTTC GGTAACCCC            TTGTTTAATCTGGCG 100 130
        yccA 3063326 .. 3063343 + -12.7   -5.0917   CATTCCCCTCTTCCA             GCCCTGC TTAT GCAGGGC              TTTATTTTTTGCTAC 100 45
        tusE 3063795 .. 3063811 +  -7.9  -3.55801   TTGTCCACACGAGCA              GAGCGCG GCC CGCCCTC              TTTCAGCCACTTGAT  62 98
        rlmI NONE
        hspQ 3067208 .. 3067245 +  -8.5  -4.86731   TACGTAACTGATTGT   ATTTAAAAGGCCGGAAA GCGA TATCCGGCCATTTAAAC    TTTTATTTCGCCAGC  89 30
HF553_RS15205 3068504 .. 3068519 +  -3.2  -5.90231   TCCTCTTGATATGAG              TTGCCC CAGC GCGCAA               TTTTTTTGTCTTTCT 100 32
        mgsA 3069057 .. 3069083 + -15.8  -2.76737   CTGAAATAACCGCTA         CGCGGGCGGGAT GCT GTACCGCCCGCG         CTTTAGGGCTTCCTC 100 32
HF553_RS15220 NONE
        yccS 3073898 .. 3073933 + -14.1  -2.55351   GCGAATGAGCCCAGT   CGGCAAGCTCCTGGCGA CGAC TCGCCGGGAGC--GCCG    CTTCATGTACGCCGA  81 41
        sulA 3075269 .. 3075302 +  -5.4  -4.80882   GTGCTAACGTTTTTT     TTGCG-AGAACGCTT GTCAG AAGCGGTTTCCGCAA     TTTTTGCTGTACGAT  76 94
        ompA 3076629 .. 3076643 + -12.8  -5.23316   CCGTCTGATAAAAAA               CCCCGC TTC GCGGGG               TTTTTTGCTCTGGTC 100 45
HF553_RS15250 3079070 .. 3079084 +  -5.7  -2.77895   GCTGAACGCTTTTAT               TCCGA ACTGA TCGGA               CTTGTTCAGCGTACA  50 16
        fabA 3079722 .. 3079746 + -18.7  -5.24129   AAAGCCAATAAAGGC          GAAACCTCCGC ACT GCGGAGGTTTC          TTTTTTCTAAAGAGA 100 81
HF553_RS15290 3089215 .. 3089225 +  -2.4  -4.00348   TTCAACACCAGCTCC                 GCGC GTT GCTC                 TTTGGTTAATTCGAA  54 341
        pncB 3094914 .. 3094931 +  -9.1   -4.7339   GTTAATTCTTCCCAG             GGAGCCT GCCA GGGCTCC              TTTTTCAGGTTTATT  90 36
        asnS 3096492 .. 3096508 + -13.7  -5.78622   TTACGTCACACTCAA              GGCCAGC TAT GCTGGCC              TTTTTTTTCGCCTGA 100 44
        ompF 3098204 .. 3098219 +    -9  -5.77988   TTTATGCCTCAAAAA              CAGGAC TTCG GTCCTG               TTTTTTTATCTCTCT 100 58
        aspC 3099571 .. 3099601 + -14.2  -3.50853   GACTGGCGTGACCGA       TAAAAAAGCCTGCA CAT TGCAGGCTTTTTCA       TTCTGCTTACCAGAC 100 50
        elyC 3111690 .. 3111714 +    -7  -3.36991   CCCGGGGCCGACCAT          CGCCAGAAGC TGATC GCTACGGGCG          TCTTTAAGCATACTG  58 251
HF553_RS15440 3129311 .. 3129331 + -10.4  -5.26247   GGCTGCGTTATATTA           CGGGG-CGC CTTT GCGGCCCCG            TTTTATTTATTTTCG 100 77
        focA 3130559 .. 3130576 +    -2   -3.1247   AGTAAATAAAAAATC             CACTTA AGAAGG TAGGTG              TTACATGTCCGAGCT  42 63
        pflB 3132908 .. 3132926 +   -16  -4.62069   GCGTACAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCAGATGCGCC 100 70
        pflA 3136009 .. 3136030 + -11.6  -4.39568   TTATCCGCTTTTAAA           CGGCTACC CATGAC GGTAGCCG            TTTTGCTGTCTGGGT  93 53
        trxB 3153489 .. 3153505 + -12.3  -4.89063   AACAAAAGTAAAAAA              GGCGACT ATA AGTCGCC              TTTATTTTTGCGTCG 100 56
        cydD NONE
        cydC NONE
         aat NONE
HF553_RS15540 NONE
        infA 3158376 .. 3158392 + -10.1  -5.10497   GGCGGCTGGATAAAA              GGTCGGT TTA ACCGGCC              TTTTTTGCGTCCATT  93 62
HF553_RS15555 NONE
HF553_RS15560 3161014 .. 3161037 + -13.2  -3.69364   CAGCGTTAATTTGCC          TCCCCGCGCCA GTT TGG-GCGGGGA          TTATGTCTATTGCAT 100 32
HF553_RS15565 3161258 .. 3161277 + -12.2  -4.96646   ATATTCAAGTTGAGA            GCCTGTAC AGAA GTACAGGC             TTTTTGCTTATATGC 100 40
HF553_RS15570 3162283 .. 3162293 +  -5.4  -3.27704   ACGTAGAAAGTGTGA                 TGCT AAT AGCA                 TTCGCTTTCGAAAAT  56 74
HF553_RS15575 3162764 .. 3162781 +  -9.8  -3.86346   GCCGGCGTAAAAAAA             CCGGGC GCTAAG GCCCGG              TTTGTACGGCAGTGA  81 196
        cspD 3166014 .. 3166034 + -12.6  -5.27335   ATCCAGGAGGCAAAA            TGCCAGCC CGATC GGCTGGCA            TTTTTATTTAACGCC 100 62
HF553_RS15605 3170522 .. 3170536 +  -4.2  -3.95324   CAGCGCAGGCAACGC               CGTGAG ATG TTCGCG               TTCTTCTTCCCGATC  60 283
HF553_RS15615 NONE
         hcp NONE
         hcr 3175816 .. 3175844 +   -11   -2.7464   AAACGTTCCATCATA       GGCCCGGTAAGCG TCAG CGCT-ACCGGGCG        ATTTGCCGCTCGCTT  74 46
        poxB NONE
        ltaE NONE
HF553_RS15640 NONE
HF553_RS15645 3181714 .. 3181726 +  -4.8  -4.11692   CACCCCGCCGGACAT                TCGC CAGCC GCGA                TTTTCCAGCTCAATG  62 475
HF553_RS15660 3183096 .. 3183126 +  -7.7  -3.97709   CCATAACCCCGTAAA      TTGTCTGGCATTCT GCCC GGGATGCC-GACAA       TTCTTCTTACCTACT  72 67
        artP NONE
        artJ NONE
        artQ NONE
        artM 3186245 .. 3186271 + -13.1  -5.68039   ATATTGAATAAACCC         GACGGGCAAGT GGTTA ACTTGTCCGTC         TTTTTTTATCCATTT 100 118
HF553_RS15685 3187367 .. 3187387 +  -3.9  -4.93877   AGACCCAGACGGCGA            TACTGCTCC GCC GGAGCATCA            TTTTCTTTCATCAAA  75 272
        grxA 3200026 .. 3200036 +  -4.6  -5.41143   CCCTCTACCGGAGGG                 CGCT ATT GGCG                 TTTTTTTCGCCGGTG  84 55
HF553_RS15765 3202474 .. 3202510 +  -3.7   -5.4505   CCCCATTTTGTGGAG    CCCATCAACCCCG CCATTTCGGTT CAAGGTTGATGGG    TTTTTTGTTGCCCGA  83 138
HF553_RS15775 NONE
HF553_RS15780 3205453 .. 3205466 +  -4.5  -3.48105   ATAGCCCATTGCCGC               CGCTT AACC AGGCG                TGTTTACTGACTTCA  52 189
        ybjG 3207519 .. 3207547 + -14.7  -3.70902   AAAAAAGAGTAATAT        TAAGCGCTCTGTA TGG TGCGGAGCGCTTA        TTTAACTCTCCAGGG 100 48
        deoR 3208330 .. 3208366 +  -4.9  -4.17048   CTGATGTATTAACCG    CAGGTTTGCCGGATGCG ACG CGCACCCGGCAACGGAG    TTATTTTACGAGAAC  65 29
HF553_RS15805 3210856 .. 3210866 +  -4.6  -3.14564   ATTTCATCGCCGCCG                 CGCG GAC CGTG                 TTCATGCAGCCATAG  47 437
        rimO 3213631 .. 3213646 +  -8.2  -2.50074   TTAACGCCACCTCCC              CCGGCG CGGG TGCCGG               ATGTGTTATCCCGCC  59 37
        moeA NONE
        moeB 3222213 .. 3222231 +  -8.8  -2.87564   GATAAACATACCAAA             GCACGGTT TAT GGCCGTGC             TGTATCAACAGATAA  65 51
HF553_RS15860 NONE
HF553_RS15865 3225858 .. 3225875 +  -8.4  -3.14132   TGGCGCTACGTTTAA             CAGGCC GACGCA GGCCTG              TTAATCAGAAGGGAG  67 81
HF553_RS15875 3228245 .. 3228272 + -10.6  -3.02144   CTTCCCGCTCACCTG        C-GGTGCGCCC TTTGTCT GGGCGCACCCG        TCTTACCGGACCTAC  76 54
        ldtB 3231088 .. 3231114 + -19.6  -3.03243   ACAGACTCTGCCTGC         GAAGCCCGATAG ATA CTATCGGGCTTC         TCTTACGGCATCAGT 100 40
        mntS 3233050 .. 3233076 +    -8  -5.77632   TTTATTTTGCATCCT         CAACGGAAATGG CGC CCATTTCCCCTG         TTTTTTTGTGGTTTT 100 62
HF553_RS15905 3234881 .. 3234898 +  -8.4   -5.0925   TTCAGGCAAAAAAAA             TCCGCC CCGAAA GGCGGA              TTTTTCATTTTCACC  91 48
        rhtA 3236776 .. 3236802 +  -6.8  -3.61398   TTTTTGTCATATTTT         TTCTCATTTT TTACATT AAAATGAGAA         TTATTACCCACCAAA  64 124
         dps 3237620 .. 3237638 +  -7.4  -4.19953   TAAGTCATCCCTATA             CCCCTG CCTGGCA CAGGGG             TTTTGCACTTAAATA  74 162
        glnH 3238722 .. 3238762 +  -9.9  -3.69216   AACGACCTGATGTTG GCTTGT-GGCCCGGT-AGTG AGGA CGCTCACCGGGCCTAC-AGC TCTTTTCCGTGACGG  77 41
        glnP 3239495 .. 3239506 +  -4.4  -2.95448   GTCGTCTTGAAAGAA                GGAT GAAA ATCC                 TGTGATTGAATTTAA  48 9
        glnQ NONE
        ybiO 3242644 .. 3242656 +  -3.3  -3.66166   AAGCGGCTTTGCTTT                TGCCC CTG GGCCA                TCTCTTTTTTCACCA  51 98
HF553_RS15950 3244012 .. 3244023 +  -2.2  -3.35679   ATTCCTTTACGCTCA                TGCT TTTT AGCG                 TTCTGCGTCGCAGAA  45 72
HF553_RS15955 3244639 .. 3244660 + -13.7   -5.8187   TTGTTACCCTTATTT           GCCCGTCCG CCAC TGGACGGGC            TTTTTTTATTCGCTA 100 154
        cecR NONE
        hlyD 3251270 .. 3251286 +  -3.6  -3.65046   TTTAATGACGAGGTA              CGGCAT GAGTG AGGCCG              TTATTACGCTGCACG  51 14
HF553_RS15985 NONE
HF553_RS15990 3254183 .. 3254208 +  -8.3   -3.9941   TAAGGCGTTCACGCC         GC-CATCCGGCA TTA TGCCTGATGCGC         TTTGCTTATCAGGCC  76 75
HF553_RS15995 3255718 .. 3255730 +  -4.8  -4.46212   CACGAACGCGTTGTT                GCCA CTTCA TGGC                TTTTCTCCTGAAGCA  68 388
HF553_RS16005 NONE
        clsB NONE
HF553_RS16015 3258830 .. 3258856 +  -5.9   -4.4009   ATAAATTTAAGCAGA        CGCGTTTTCGCT TTCC AGC-ACAACGCG         TTTTATCCGGTAAAA  70 37
        yvcK 3264901 .. 3264928 + -13.6  -2.90219   CTGCGCTTATCAGAA        GCCTGTTTACACC GAA GG-GTAAACAGGC        TCTCTCCCCCTTCTG  87 59
        bioA 3275410 .. 3275426 +  -2.2  -3.36803   TTTAGCCATTAATCA              GCGGTA AGCGA TGCTGC              TTCTGGCTACACTTC  45 29
HF553_RS16100 3276332 .. 3276354 +  -5.5  -4.33417   GTCGGCAGGCTATCC          ACGCTGTGCG GGTG CGC-CAGCGC           TTTATTCTCGCTGGC  69 417
HF553_RS16130 3283905 .. 3283939 + -13.5  -4.25104   CCGGTTCAGGCTTAT     AAACGGGCCGCCGCA GCAGA TGTGGCGGCCCGTGG     TTTTACTGCAAGCGA 100 49
HF553_RS16140 3286469 .. 3286487 +  -3.8  -3.72695   TCCAGCACCATGACT             TTATCCGC CAG GTGGAGAA             TTTCATCGAGAGAAT  53 492
        modE NONE
        modF 3291317 .. 3291331 + -11.4  -3.29263   AATGTATTATCAGAA               TGGCGC CGC GCGCCA               TTCTGGAACCACTCT  83 40
HF553_RS16175 3292411 .. 3292425 + -12.8  -5.44119   TCCGTTTCATTCCCA               GGCGCG TAA CGCGCC               TTTTTTTCGGATAAA 100 55
        galE NONE
        galT NONE
        galK NONE
        galM 3297016 .. 3297038 +  -7.7   -2.8001   GGTTATGCGTAAGCA           TTGCCGCCA ACACC TCGCGGCAA           TATAATGAGAATTAT  60 179
        gpmA 3297854 .. 3297868 +  -7.8  -3.30124   TCACCTTTGCCGGAT               GGCGGT ATA ACTGCC               TTATCCGGCCTACGA  65 41
HF553_RS16240 3307032 .. 3307048 +  -3.7  -4.56597   CGACAGCGTCCAAAA              TGAAAGA AAT TCCTTCA              TTTTTAGCAACCAGA  69 199
HF553_RS16250 NONE
HF553_RS16255 3309303 .. 3309338 + -15.6  -4.57353   TACATTAATATTGGC    AATATCGGTCCGGTAG ACTG TTACCGGACCGATATG     TTTTCTATCCTGCAC 100 44
HF553_RS16265 3311159 .. 3311176 + -11.3  -5.54907   AAAAGTCTGATAACG             GGAGAGC TTTC GCTCTCC              TTTTTATTTTGTCAG 100 48
        zitB 3312193 .. 3312219 + -13.6  -3.51934   ACCATTAACGGGAAA         GCGCGCGCGATC CTC GCTCCCGCGCGC         TGTTTATCCACAGGC 100 33
HF553_RS16415 3338072 .. 3338101 + -17.9  -2.79535   AGCGTTAATTGACAA       CCGGATGGCGACG CAAC CCTCGCCATCCGG        TACATTTTCCCTTTT 100 33
HF553_RS16420 3339342 .. 3339353 +  -4.4  -4.21194   TAAAACGGGCGTGAG                GACA GTGT TGTC                 TTTTCAATAATGCCG  62 120
HF553_RS16450 3345099 .. 3345124 + -11.1  -2.87463   ATCCTGATAGCAGAA         TGCCCGGTAGT TTGC GCTACCGGGCC          TGTATCACGCCCCTT  75 34
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC NONE
        kdbD NONE
        kdpE 3355044 .. 3355069 +  -9.7   -2.7471   GTCATTTATTTTCGG         CGTCGCGAATA ATTA TTTTCGCGGCG          ATATTATATTTTATA  69 80
HF553_RS16495 3355674 .. 3355696 +  -2.8  -3.96148   ATCAGCGGGATAGCT           TTGATTTTTT CCG GAAGAATCAG           TTTCTCATGCGAGAA  54 328
        speF NONE
        potE 3360049 .. 3360077 + -14.6  -3.18657   CACGGCTGATGGCGC       GCCCGGGCTG-CG GTAA CGATAGCCCGGGC        ATTTTCACTCTTTGA  95 32
HF553_RS16515 3360671 .. 3360686 + -10.4  -5.12068   CGTTAATACAAAAAA              GGAGCC GTAA GGCTCC               TTTTTCTTCCATATC  93 104
        ybfF 3363881 .. 3363919 + -13.1  -2.57244   CTAACTGATTAAAAA  C-TCATCGCCTGTGCGCG ATTA CGCGCGCGGGCGTTGGCG   TCGCTTCCTCGCTGA  84 37
        ybfE 3364334 .. 3364351 +  -3.4  -3.37755   CGTGTAGCAGAGCGT             GCAGTC CCGCGT GATTGC              TGTTTCCGCATATCT  48 63
        fldA 3365137 .. 3365153 +  -8.7  -4.55128   CAGTTTTATTAACAT              CTGCAAG AGA CTTGCGG              TTTTCATTTCGGCAT  87 185
         fur 3365730 .. 3365747 + -11.3  -5.39721   TAAATCTTTCGAAGA             GCCAACC GCCC GGTTGGC              TTTTTTATATCCTCC 100 44
        tcuR 3366731 .. 3366746 +  -3.2  -3.14683   CCGGCGAATGGCCGG              GCGCAA CCCT TTACGC               TTACTAAACCCCTGT  46 3
        tcuA NONE
        tcuB NONE
        tcuC 3370912 .. 3370930 +    -6  -3.74198   CCCGCACGCTTTCTT             CGTTAGCA AAT TGCTGATG             TTTGCGGTCTTTTTT  60 202
        nagB 3377990 .. 3378015 + -14.7  -2.87672   TCTGTAATGTTGTCT         CCGCCCCGC CAGTCAAT GCGGGGCGG          TAAATTTTTGATATC  89 34
        nagA NONE
        nagC 3380464 .. 3380480 +  -3.7  -2.86177   AAATTCCCTGGGTAG              TTCATGA CCA TCAAGAA              TGTAATCTGCGATAT  46 69
        nagD 3381195 .. 3381211 +  -6.5  -3.49951   CTGGATTTACCCTTC              CGTCGCT GAG ATCGACG              TTATCTAAACCTGTC  60 1
        asnB 3383190 .. 3383205 + -10.4  -5.60993   TTAACGATGACGAAA              GAGCCC CTAG GGGCTC               TTTTTTTATAGCAAC 100 42
HF553_RS16615 NONE
HF553_RS16620 NONE
HF553_RS16625 NONE
HF553_RS16630 3383786 .. 3383802 +    -3  -3.33815   CATCGAAGAAATCAT             CTG-GCT ACGT AGCTCAG              TTGGTTAGAGCACAT  46 39
HF553_RS16635 NONE
HF553_RS16640 3383990 .. 3384017 + -13.6   -3.2362   TACCCCAGCCACCTT        TAAAAAGCTCGC TTCG GCGAGCTTTTTG         CTTTTCTGGCAATTC  93 30
        miaB 3386881 .. 3386906 + -11.9  -3.23216   AGGAAAGGCAATAAT         GCCCGAT-GGTG CTA CACCTGTCGGGC         TTCCTGGTCATGGCC  83 47
HF553_RS16655 NONE
        ybeY 3388586 .. 3388618 +  -8.4  -2.57988   TGCAGAATAGTAGCT     TGCCGGATGGCGGCG CTTG CGCC-TTATCCGGCC      TACATTCATGCCTTT  63 31
        corC NONE
         lnt NONE
HF553_RS16675 3392560 .. 3392576 + -12.3  -5.76949   GGCAACAATCTTCGA              GGGTAGC GCT GCTACCC              TTTTTTTTCGGAGTA 100 148
        gltJ NONE
        gltK NONE
        gltL 3394745 .. 3394766 +   -13  -2.90714   GCACTAATCTTCCCA           GCGCGCAC GTCAGA GTGCGCGC            TATCTCACGCTTTAC  86 34
        rihA NONE
HF553_RS16700 3396546 .. 3396562 +  -3.7  -3.15663   TCTTCCAGATCGCGT              CTGAC AGCGCGC GTCAG              TTCGTCCACCTCGGT  45 371
        leuS NONE
        lptE NONE
        holA NONE
        nadD 3406451 .. 3406464 +  -2.3  -4.07885   CATTGCGCAGCGCCG               CCAGC AGAC GCTCG                TTTTGCGCAGCGCTG  56 44
HF553_RS16755 3408250 .. 3408266 +  -5.1  -3.78934   GGTTTCGCCCATTGA              CAGCC CCCGACA GGCTG              TTATTCTCCGCAGCC  59 69
        rsfS NONE
        rlmH NONE
        mrdA NONE
        mrdB NONE
        rlpA NONE
        dacA 3414916 .. 3414946 + -13.5  -5.82316   TATACTATGCATCAG      TAA-AACTCCCGCC CTGT GGCGGGAGTTGTTA       TTTTTTTTACGTAAT 100 76
HF553_RS16790 3415246 .. 3415260 +  -2.1  -3.31461   ATTGTAATACATCCA              GA-CGG TTAC CCGGTC               TTATCCGGGTAACTC  45 34
        lipB 3416112 .. 3416126 +  -8.6  -3.10597   GCATGGCCTCTTCAG               TCCTCA TGA TGAGGA               ATTTTCCGTGAACAA  66 159
HF553_RS16800 3417306 .. 3417330 +  -4.9  -3.38768   ATTTTACATTTTGCC          GGGCTGTCAGG CTG CTTTATGGCCC          TTATCAATGATATAC  54 98
        lipA 3418441 .. 3418455 +  -8.5  -5.58454   TTCAGGCAAAAAAAA               CCGGC AACTC GCCGG               TTTTTTTACTCTGCG 100 62
        crcB 3420097 .. 3420113 + -10.8  -4.20042   TAAGCGCAAAAAAAA              CCCGCC GAAAG GGCGGG              TTTTGAAATCTTGCT  88 38
        dcuC 3422885 .. 3422915 + -13.9  -3.02043   AGCTGATAGCCGGTA       AGCCGGGGCGAGG GAAAA CATCGCCCCGGCA       TCTTAAACCAGGCTT  87 35
        citC NONE
        citD NONE
        citE NONE
        citF NONE
        citX NONE
        citG NONE
        citT 3432390 .. 3432415 + -15.5  -5.37345   GTAGGTTAAAAATGA         TGCCGTTCAGG TTCA CCTGAGCGGCA          TTTTTTATGATTAAA 100 54
         rna 3433431 .. 3433453 + -12.7  -5.07652   ATCATGAGAGTTAAA           CCCTCGCCG CCAGA CGGTGAGGG           TTTTCTTTTGGGACC 100 179
         rnk 3433955 .. 3433974 + -12.2  -3.75897   TAATGCGTTTACACA            GAGGATGC CTGC GCATCCTC             TTTCCGTTAGCCCTT  93 58
        uspG 3435916 .. 3435942 + -20.2  -4.75372   GCTAAAAACTGACAC         GCCCTGCCAGGT CAC GCCTGGCAGGGC         TTTTTACTGCATCAT 100 49
        dsbG 3444236 .. 3444254 +  -3.2  -3.45434   TAAATAAACTCTACA             TTAAGTTT AAT AAACATAA             TTCTGGTAAATTATT  50 257
HF553_RS16940 3445265 .. 3445281 +  -8.1  -3.90588   TATAAATTAAGTGTA              TACATTC GTA GAATGTA              TTTACTTAGAGAATA  72 67
HF553_RS16945 NONE
HF553_RS16950 3447542 .. 3447564 + -11.9  -3.01712   GGCGCGCAGCATATC           CGCCAGCGC CAGTT GCGCCGGCG           TATTGACGCAAAACG  76 353
HF553_RS16960 3449846 .. 3449871 + -11.9  -3.19602   ACCTGTCATCCAAAT         GCCCTCTCC TTAATTCT GGAGAGGGC          TATTGATGTAAAAAG  83 281
        fepB 3458285 .. 3458333 + -13.4  -3.13403   TGTTTTAGCCTTATC GGAGTCTTATCCGACTGACCAGA CAGA TTTGGTCAGTCGGATAA-ACGCG TCTTCATCAGCCAGC  91 33
        fepD NONE
        fepG NONE
        fepC 3462503 .. 3462522 + -12.2  -4.14739   CACACAGATGACAAA            GCCGGATA TCGC TATCCGGC             TTTTCGGGTAAATCA  93 46
HF553_RS17045 3471755 .. 3471766 +  -4.4  -3.11289   GAATTAGCAAAAAAC                GATG CGAA CATC                 TCATTTTCCCCTTCC  49 71
        entD NONE
HF553_RS17055 NONE
HF553_RS17060 3474037 .. 3474069 +  -9.9  -4.29845   AATATCATATACCTT     CTGGTCGGTGTCGCG CAGGT CGCG-CGCCG-CCAG     TTTTAGCTTCCGTTC  86 157
HF553_RS17070 NONE
HF553_RS17075 NONE
        nfsB 3476253 .. 3476270 + -12.7   -5.1361   TAATCCCCTGCCTAA             GCCGGAC GCCC GTCCGGC              TTTTTTCACCTTTCT 100 38
HF553_RS17090 3480496 .. 3480512 +    -8  -3.05844   GCCTTGTACGGACAG              GCCGAA CAGCA TTCGGC              TATTCGAATAAACGC  60 487
HF553_RS17100 3483193 .. 3483209 +  -7.9  -2.70932   GCCCAGCGGCATAAC              CCAGGCC TCC GGCGTGG              TGATTAAAAACGACA  55 248
HF553_RS17120 3486412 .. 3486433 +  -2.9  -3.53012   CGCTCGGACGATAAA           C-GTAGGCTG AAC CCGCCTGCAG           TTTGACGCCGCAGGC  48 27
HF553_RS17135 3487762 .. 3487791 +  -9.4  -2.96009   TCTTCGAAAAACATG       CAAAGCCTTGCA AGCCGA TGCAAAGCTTTG        TGTGTCCCGTTTTTG  70 237
HF553_RS17140 NONE
HF553_RS17145 NONE
HF553_RS17150 3490914 .. 3490946 +  -9.1  -3.20858   ATGTATAATTAATGT      TCCCCGCCACC AATGGGTAACG GGCGGCGGGGA      TTCCTACATATCGTA  70 46
        fimW NONE
HF553_RS17175 NONE
        fimY 3494404 .. 3494415 +    -3  -3.59781   ATTACATAACAAATA                CTAA ACAA TTAG                 TCTTTCATATTATTT  50 226
        fimZ 3495811 .. 3495823 +  -2.6  -4.37092   GCGTGGCGTCACCGG                CGGC GTGAA GCTG                TTTTGTCGGCCAGGT  60 397
        folD NONE
        ybcJ 3503214 .. 3503247 + -12.5  -2.75307   TGGCCTGATACAGAG     TGCCGGATAGCGACGC AAA GCGTC-TTATCCGGCC     TGATTACGCTGTCTT  82 33
HF553_RS17230 NONE
HF553_RS17235 NONE
HF553_RS17240 3505554 .. 3505576 +  -5.5  -3.97368   CGCGCTTCAAACGCC          TC-GCCGCCC GCCG GGGCCGCTGA           TTTATCCGTTCCACG  63 449
        ppiB NONE
        lpxH 3508048 .. 3508058 +  -2.4  -4.08394   AAGCAGCGTGTCCCG                 CACC ACA GGAG                 TTTTAAGACGCATGT  55 121
        purE NONE
        purK 3510089 .. 3510130 +  -2.1  -4.20106   AGCGGCGCTTTCGAT AATCTGACGCGGTGCCGGGG AAG CAACGACACGGCG-CAGATA TTTTCCATCACGTTT  56 471
        allD NONE
        allC NONE
        allE 3517801 .. 3517820 + -13.6  -5.71983   GCTATGTTGGATTTT            GCCACGGT GAGA ACCGTGGC             TTTTTTTATACTTAA 100 73
        allS NONE
        mnmH 3532006 .. 3532031 +  -6.1  -3.35197   TAGCTTATTTTTATT         GCCGGCT-GACG CTA CATTGAGCCGGC         TTAGTGTCTGTCGCG  59 38
        tesA NONE
HF553_RS17400 NONE
        cnoX 3542028 .. 3542048 +  -3.9  -3.84901   GCCCGGCGGAGGCCA            TTTTCGGCG TTG CGCCCAAAC            TTAATTTTTCCTGGA  56 389
HF553_RS17420 NONE
HF553_RS17425 3545083 .. 3545095 +  -5.5  -5.40474   AACCGAATGGCTTTG                CTGGT TAA ACCGG                TTTTTTTCGCCACAT  95 402
        copA 3547741 .. 3547770 + -13.7  -3.62597   AAAGCGTAAAAAGTC       TCTATCAGGCAGC ATTA GCTGCCTGATATA        TTATTAAGCCATCAG 100 32
HF553_RS17440 3548742 .. 3548756 + -12.8  -4.36914   GTTGACGTCCCGTCA               GGGCGC ATT GCGCCC               TTTTCTCCAACGCGC 100 52
HF553_RS17445 3549653 .. 3549672 +  -3.4  -3.11291   CATCGTTATTATTAT            CCCGACGC TTTC GCTTCGGA             TCTTCAGATTGTCGC  45 83
        ybaK 3550673 .. 3550683 +  -8.2  -3.83998   AACTGTGGATAGGCG                 CCGG AGT CCGG                 TTTCATCTGCGCTAC  71 422
HF553_RS17460 NONE
HF553_RS17465 3555750 .. 3555771 +  -7.9   -4.4518   AATTCAGCAATAGCC           CCCGGCAGC AGCG GATGCTGGG            TTTTACGTTTTGCTT  79 447
         aes 3557834 .. 3557879 +  -2.5  -5.00616   TGAGTTTCAGCATCA TATCAATATGTTCCGGCGTCG CGTT CAGCGCCGGAATGTACGCATA TTTTTTACCGCCCGC  74 54
        priC NONE
        rsmS 3567202 .. 3567219 +  -2.7  -3.01133   AAGACGACTCGCAAA             CAGAG TAATTGCC CTCTG              GTTTGTCCTCGTTGT  43 18
HF553_RS17530 3568533 .. 3568546 +  -3.1  -3.79633   GGATGCTCCATCGCC               G-CCTG TAG CAGGAC               TCTTTTCACTTTCTC  54 356
        acrA 3573693 .. 3573707 +  -2.8  -3.14878   GCAAGCGGTGATCAA               CCTG CTCAGCC CAGG               TCTTAACTTAAACAG  45 5
        acrB 3576904 .. 3576919 + -11.8  -5.00616   GCTCACTGTTGATAA              GGCCGC GCAA GCGGCC               TTTTTTACGCAAAAA 100 44
        tomB 3577769 .. 3577785 +  -2.3  -2.79133   AAAAATTATTACAAT              CATAGGT AGA ATTTATG              TCTGATAAACCATTA  40 39
         hha 3578113 .. 3578124 +  -5.8  -2.91869   CACATACCAATAGCA                GGGA ACGT TCCC                 TCTAATACTTTATTA  51 137
         maa 3578793 .. 3578806 +  -2.3  -2.63252   TCTCACGTTACACCT               CCCTT TAAA ATGGG                CTGTTATTACCCCCT  39 87
HF553_RS17570 3579327 .. 3579350 + -13.9  -2.94322   GCCGGTAATAAAAAA          GTGCGCACC CTCCCT GGTGCGCAC           TGCTTTCCCTGAACT  87 33
HF553_RS17585 3581777 .. 3581793 +  -2.9  -4.16842   GCAATTGCAACCCAT              CAGGCAT CGG ATGCTGG              TTTCTTGCGCATCCG  58 246
HF553_RS17595 3582504 .. 3582517 +  -2.3  -4.56597   GGCGCCTGTTTACCT               TCGGT ACGT ACCGC                TTTTTGCGACAGCAC  65 353
        tesB 3583860 .. 3583874 +  -9.2  -3.17212   CACAATTAAAAAACA               TGCCGC TAT GCGGCG               TTAATGGCCTGATGA  70 32
HF553_RS17635 3591049 .. 3591067 + -10.3  -3.14344   AGAAACCAAAAAAAA             GCCAGAC TGAAT GTCTGGC             TTGCTGGAAGAGATC  74 39
HF553_RS17645 NONE
        queC 3594482 .. 3594493 +  -7.2  -3.30124   GTTTTGCCGGATGGC                GGCG CACG CGCC                 TTATCCGGCCTGGCG  63 43
HF553_RS17700 3606031 .. 3606046 + -11.8  -2.92091   ATAGCAACAACAAGA              CCCGGC AGAA GCCGGG               TCTGTAGATGCCTAT  80 40
        ampG 3607762 .. 3607774 +  -6.3  -3.35996   TGTTTTATTTTTACA                TTGGT TAT ACCAA                TTATCCCTCAACATC  59 252
        cyoA NONE
        cyoB NONE
HF553_RS17720 NONE
HF553_RS17725 NONE
        cyoE 3612788 .. 3612815 + -13.6  -4.18762   GTCTGGTAAGACTTT        TGATGGCGTATC GCTT GATACGCCATTA         TTTTCGCTCGCAGTT 100 32
HF553_RS17750 3617724 .. 3617767 +  -7.4  -3.14463   CAGCAAAGGATGAAT GCTGTATTGCCGGATGGCGGC GAG GCT-CTATCCGGCATAACAAC TTAATCGCGGAAGTT  62 28
        panE NONE
        yajL 3619962 .. 3619976 +  -7.1   -3.2614   TACGGGCGTTCGCCC               TGCGC CAGAC GCGCA               TTAATATGCGCAATC  62 138
        phnR 3622745 .. 3622755 +  -6.8  -3.30771   GGTGCGCCGGATGTT                 GGCT GCG AGCC                 TTATCCGGCCTGTCA  61 43
        phnS NONE
        phnT NONE
        phnU 3625914 .. 3625924 +  -5.4  -2.84602   ACCGGCGTAAGGAGC                 TAGC CAT GCTA                 ATTTGGTCACCTAAA  51 23
        phnV 3627093 .. 3627137 +  -2.2  -3.82097   TTCTACCACCTTATC GAGAATACTGAAGTCGAA ATTTTCTTC TTCGGCTTCAATTTTCGC TTTAATGGCTTTCAC  52 402
        xseB NONE
        ispA NONE
         dxs NONE
HF553_RS17825 3632537 .. 3632579 +  -8.3  -3.68351   CGACATATTGTTCGG GGGTAGGCCGGAT-AAGGCG TTTA CGCCGCCATCCGGCAAACCC TTTAAATAATACCGA  72 85
HF553_RS17860 3637623 .. 3637633 +  -6.8  -4.21812   CGAAATATTTAGAAA                 CGCA AAT TGCG                 TTCTTTTCACTCCCG  72 272
HF553_RS17865 3638551 .. 3638574 + -12.4  -2.72144   CTAAACCTGCAAAAA          AGGCCAGAGG TCGC CCTCTGGCCC           GTTTCGGGCGCATGC  82 37
        acpH NONE
HF553_RS17920 3648023 .. 3648040 + -12.7  -5.29782   AGTGCATTGATAAAA             GGCTCGC GAAT GCGAGCC              TTTTTTATGCGTGTG 100 44
HF553_RS17925 3649628 .. 3649651 +  -9.5  -3.57462   GCATCCGCCACGACG          CAGCGCCAG ACTGCG CTGGCGCAG           TTTCGCCATACGCTG  71 291
        sbcD NONE
        sbcC 3661292 .. 3661302 +  -4.6  -3.41359   TTCATAGCCGCAGCG                 CGCG ACA TGCG                 TCTTCATTTTCGGCA  52 166
        araJ 3662628 .. 3662639 +  -5.8  -3.29144   AACGATTTCATCAGC                GACG GAAC CGTC                 TTGTACAGGCGCTCA  54 157
        rdgC 3664783 .. 3664803 +  -3.3  -3.17075   CATTGCTTTGTAGCA            TAATCAGGC CCC GTCTCATTA            TTAAATTAACACCCA  45 347
        proC 3668140 .. 3668182 +  -2.8  -4.18676   TAAATCCTGAAGCCC GGCTGGACGTCATGCCGCCAC TTCG GTG-CGGT-T-ACGTCCGGCA TTCTTTGCTTTATAA  58 31
        ddlA 3673852 .. 3673879 + -12.8  -3.70674   CGATGTAATACCGCA        CGCCCGAT-AGCG CAA CGTTTATCGGGCG        TCTTTTACCTCGTCA  95 33
HF553_RS18045 3674811 .. 3674829 +  -8.8  -4.13767   CCGGGCAACATTTCC             CGCGCAAG CGT CTTGCCCG             TTTTGGCCTCGGCCA  80 175
        ampH 3678535 .. 3678570 +  -3.9  -5.19251   TCCTGCATCCTGAGT    CGTCGCGCCTCGCGCT ATATC AG-ACGAGGCGCAACA    TTTTTGTTAATATTC  79 28
        hemB 3683696 .. 3683717 + -14.4   -3.5936   GTTAATTCTGTTACA           GGGCGGCG CGCTGC CGCCGCCC            TTTCCCGACTTTACA 100 36
        prpR 3691372 .. 3691396 + -12.2  -4.91109   TGCCAGGAATAAATA         TACCCGCC-GG AAAC CCAGGCGGGTA          TTTTTATGATGCAAC 100 117
HF553_RS18110 3692890 .. 3692905 +  -6.8  -3.05816   CACATCGTAGCTTAG              CCAGGT GCTG GCCTGG               TTCCGTGGAGCATAA  54 360
        mdsA NONE
        mdsB NONE
        mdsC 3715988 .. 3715998 +  -2.4  -2.63715   GGTAAAGAAATTCCC                 CTGG CTG CCCG                 TGATATCCCCTAAGT  38 288
HF553_RS18245 3723745 .. 3723770 + -13.3  -4.18018   AAATAATTGTCGCTA         CGGTCTGGCGT TGAA ACGCCAGACCA          TTTTCAATCGCCAGG 100 35
HF553_RS18250 NONE
HF553_RS18255 NONE
        stbD NONE
HF553_RS18265 3729331 .. 3729349 +  -3.2  -3.63991   ATTATCTGATTCAAT             TAATGTGT AGA ACGTATTA             TTATTACGCATCATA  51 199
HF553_RS18275 3731331 .. 3731374 +  -6.3  -2.73681   AACAGATGATAAAAA TACATGCATGGTCTGAG-ATAC CCT GTCTACTC-GACCATGCA-GTA TGGTTCAACTAAATC  53 32
HF553_RS18335 3741448 .. 3741483 +  -6.9  -3.32268   ATACATCACGATCGA    TTGAATGTCTGCTGT TCGCTC GCAGCGGACCTTCAG     TTCATGTAACTTTTC  61 85
         hha 3752303 .. 3752321 +    -3  -3.36492   GTGTGGTCTCACTTC             CTCTGTGG CGC CCGGGGAG             TTGTGAACTTGCACG  46 149
HF553_RS18390 3753104 .. 3753124 + -10.5  -2.74144   TTTACGACATGGCTA            TTCCGTATG AAC CATACGGAG            ATTTAACCATGGCAC  71 119
HF553_RS18395 NONE
HF553_RS18400 3754625 .. 3754635 +  -4.6  -3.33696   AACTGGCGGCAAGAT                 CCTG CAC CGGG                 TTAATTACCCCACCA  51 463
HF553_RS18435 3769348 .. 3769369 +  -3.1  -3.32698   TAGCCAGTTGAACTT           TGCTAC-TCT GTG AGAGGTAGTA           TCTTCTATCCAGTGC  48 246
        betT 3771417 .. 3771435 + -12.4  -2.87146   TCGTTAATAGCAACA             TGCCGTCC TGG GGGCGGCA             ATTATTATCCCGGCC  82 34
HF553_RS18445 3771925 .. 3771936 +  -5.8  -2.78934   TCATCACATTGCTTC                GCTG AATA CAGC                 ATTTGACCTCTCTGG  50 21
HF553_RS18450 3773067 .. 3773078 +  -5.8   -2.7927   ATGGTGGAAAAAATA                GCCT AAAT AGGC                 TGATTCGATGTGTTT  50 62
HF553_RS18480 3779869 .. 3779892 + -11.1  -3.75817   GCAGTAGAGAACTGA          GGGGATAAC CGTTCT GTTATCCCC           TGTTTATTCTGCCAA  85 34
        phoE 3784756 .. 3784800 +  -9.4  -2.57463   ACCAGTTCTGATAAG TC-GC-ATTGTGCCTGATGGCG CTA CGCCATCAGGCATGACAGCAGG GTTATGCCGACAGTT  68 30
        pepD 3789112 .. 3789148 +  -9.5  -4.66318   ACCTTCACACTAATC   CCG-CTCGCCAGGTGCG TGGCC CGCAC-TGCCGAGTCGG   TTTTATTAACGTGCT  91 379
HF553_RS18545 3792938 .. 3792959 +  -8.7  -3.91798   AATAACGCCCATTCG           CCTGGCATA ATCT TTTGCCAGG            TTTCATTCCCCGTTA  73 36
        fadE 3798322 .. 3798339 + -14.1  -5.08088   TCTCGTGTCTTTCCT             GCCCCGC TTTC GCGGGGC              TTTTTCTTGCCGCTT 100 45
HF553_RS18570 3799183 .. 3799203 + -11.8  -2.97676   TCACCTTGTAAGCAA            CCTGCCGC TCACC GCGGCGGG            ATTGTTTCACTCCGT  80 30
HF553_RS18575 3799965 .. 3799988 + -11.8  -3.87815   TGAGTAAATATTTTT          GCCCGTTATT CCTG GATAACGGGC           TTTATCCAGGTCGGG  93 34
        pagN 3801228 .. 3801243 +    -4  -2.63301   GGCACGATTATGCGA              GATACT TACA AGTGTC               TGGTATGAAGATATA  44 247
HF553_RS18680 3820418 .. 3820445 + -11.3  -5.29445   TTAAATAACAAAAGA        GCCGGGAAGAT TTAAAT ATCCTCCCGGC         TTTTTATTATTCCAG 100 37
HF553_RS18700 NONE
        tagK NONE
HF553_RS18815 NONE
        tssE NONE
        tssF NONE
        tssG NONE
HF553_RS18835 3854597 .. 3854621 +  -8.6  -5.95166   GAAGACGAAAAAAAA          CCGTATCCCT TTTAC AGTGATACGG          TTTTTTTTACTTCAC 100 275
        rnhA 3856131 .. 3856148 +  -2.6   -2.7976   ATAGTGGCTACCAGG             CGGAAG CTTAGC CATCCG              GTTTGCGATATTGCC  41 15
        gloB 3857680 .. 3857692 +  -3.3  -2.93623   CATTCGCTAACTTCG                CCGTT ATG ATCGG                TCGTCTTTTAAGCAA  44 55
        mltD 3859114 .. 3859134 + -11.1  -4.31085   ACGAAAAAGCCAAAA            GGCGCCG CTTCCCC CGGCGCC            TTTTAAATTGCTATA  90 50
HF553_RS18885 3863238 .. 3863251 +  -8.1  -3.35088   CATCCAGATGCAGAT               CCTGC GCCA GCAGG                TTGCTTGCCAGATTT  64 144
        metN NONE
        metI NONE
        metQ 3873242 .. 3873259 + -12.7  -3.64915   TGTAATATTATTCAG             GACGGGC TATT GCCCGTC              TTGTCATTTATGCAA  95 63
        rcsF 3873707 .. 3873731 +  -2.1  -2.90349   TGTATCGGGTCCGCC          CTGAATATTTC GGC GAAATGAGCAG          CTTTCAGTTTGAACA  41 5
        tsaA 3874494 .. 3874512 + -13.2  -3.13343   TCACTTTTTTTGTAT             CAGGCTCA CAT TGAGCCTG             TTCGATCGTTCAACT  91 88
        proS 3876308 .. 3876328 + -16.9  -4.72497   CGGCAGATATGTAAA            GGCCTCGCA CCC TGCGAGGCC            TTTTATTAGTGAGTG 100 73
HF553_RS18975 NONE
         rof 3878880 .. 3878911 +  -3.7  -4.94058   CGGCGTGGTATCTCG     TC-GCCAGG-GCGGG ATCC CCTGCTCCTGCCAGA      TTTTCTTTAACTTAC  75 229
         map 3905857 .. 3905887 + -16.3   -4.7497   AGAGTAAATACGTAG      GCCGGATAA-GGCG TTCA CGCCATTATCCGGC       TTTTTAATGGGTGGC 100 213
        glnD NONE
        dapD 3909447 .. 3909462 + -11.8  -2.84878   AAGCGAGTGAAAAGC              GGGGGC GACA GCCCCC               CTTTGCATTACGGCG  80 39
HF553_RS19110 3911389 .. 3911406 +  -5.6  -3.09452   AGCCGATCTGGACAA             GCTTAC CCGTAA GTAAGC              TGTGTGTTGCCGGAT  52 10
        mtnN NONE
        btuF NONE
HF553_RS19140 3918352 .. 3918366 +  -5.6  -4.68994   CATCGGGTCAACCAC               CAGGCC AAC GCCCTG               TTTTTCGATGGTCAT  76 264
        hemL 3921537 .. 3921564 +  -9.9  -5.96521   CCAGAAACAACGTAG       GCCGGGTAAGGCG AAGC CGCC--ACCCGGC        TTTTTTTTGGTTCAT 100 51
        thpR NONE
        sfsA 3941737 .. 3941748 +  -5.8  -4.25283   GTATTCTGGCCGCGT                GCGT AAAT ACGC                 TTTTCCTCACAGGGT  67 64
        dksA 3942360 .. 3942377 + -12.7  -4.21772   ACCCTATTTATGACA             GGCGGGA GTTT TCCCGCC              TTATTCTTTATTGCC 100 55
      gluQRS NONE
        pcnB NONE
        folK NONE
        panB 3946266 .. 3946278 +  -9.1  -3.30124   ACCGTGCCGGATGGC                GACGC GAC GCGTC                TTATCCGGCCTACAG  71 49
        panC NONE
        panD 3947711 .. 3947750 + -10.2  -5.81412   GATTTTCAATAATAG  GACAACCC-TTCCAGAAAA ACG TATTTTGGGACGGGTTGTC  TTTTTTTTAAATCAC 100 39
HF553_RS19270 3948608 .. 3948631 +   -11  -4.67641   AAAAAGATTAGCCAA          TCCCTCAGCG GCTG TGCTGGGGGA           TTTTAATTTTAAAGT  95 53
HF553_RS19275 3949448 .. 3949466 +   -11  -2.71745   TTACGTACCAATGTA             GTGGGCCA TTC TGGTCCAC             GTTAATTATTCGGAA  74 54
HF553_RS19280 NONE
HF553_RS19285 3952671 .. 3952688 +    -2  -2.71144   TCAGCCGTTGCGACT             TTCGTA TTTAGC TACGAG              TAATTAACGCAGATC  40 5
HF553_RS19290 3953288 .. 3953302 +  -2.9  -3.60072   TAATTTTCAGGTGTT               TTGTT TATGC AACAA               TTACTGTTTCTTTTA  50 38
HF553_RS19295 NONE
HF553_RS19300 3955094 .. 3955112 +  -4.4  -3.79533   TCTCACCGTGGTGAC             CGCCAGAT GGA AACCGGCG             TCTTTTGCTGCTTTG  58 153
         can 3959283 .. 3959315 +  -8.4  -2.95459   AGCCATTAGCTATAG     GCCGGAT-AAGTCGC TTTA GCGACGCCATCCGGC      ATTTCTGCGCTTACT  65 40
HF553_RS19335 3962466 .. 3962485 +   -15  -3.30124   CGAAATAACCATTAA            TGCCCGGC GTAC GCCGGGCA             TTGTGCCGGGTAGCG 100 33
HF553_RS19345 3964723 .. 3964742 + -12.2  -3.71487   CTATTGCTGAAATAA            TGACCGTG CATC CACGGTCA             TTGTTAGCTATGATG  89 53
        speE 3965645 .. 3965662 +  -4.1   -3.0263   CAATATCTACATGAC             GCACTGT CCGC ACAGTGA              TGTTAAGGAGGTGAT  47 8
        speD 3966454 .. 3966474 +  -6.1  -2.71731   CGCGAGATTTACTAC            GGCCGCA ATATTTC TGCGGTC            TGATTCACCACTGGC  53 2
HF553_RS19390 NONE
HF553_RS19395 3976815 .. 3976838 + -10.3  -2.67694   TGCCGGAATTAGCCG          CCCATACGC CTTCAT GCGTGTGGG           TGATCTGCTGATGCT  66 161
        aroP 3986510 .. 3986533 +   -16  -3.51924   GTGGCGTTACTTTTC          CGCCCTCCCC GTCC GGGGAGGGTG           TTATCTGCCTCACAG 100 43
HF553_RS19430 NONE
HF553_RS19435 3989181 .. 3989195 +  -3.4  -4.17701   TCTTCGCCATTGATA               CCGCCG CTT TGGGGG               TTTCTACTTTGTCAG  58 194
        nadC 3991509 .. 3991531 +   -17  -2.91582   CGCTGATCCTCTCCG           CCCGATGGCG CTG CGCCGTCGGG           TCTATAAATCACCTG 100 35
        ppdD NONE
        gspE NONE
        hofC 3994788 .. 3994802 +  -3.6  -3.71848   ATATTAGAGGCTATT               GAAAAT GCG GTTTTC               TTGTTCCTGCACCCG  53 68
        coaE NONE
        zapD NONE
        yacG 3997754 .. 3997775 +  -4.4  -3.35996   AAACGTAGCCGCCAC           TGCGCCAGA AAACC TC-GGCGCG           TTATCACTGACCCTA  52 170
        leuL 4026061 .. 4026078 + -14.1  -5.64274   CGAAGTCAAACAAAA             CCCGCGC CGTT GCGCGGG              TTTTTTTATGCCTGA 100 48
        leuA 4027682 .. 4027694 +  -3.3  -2.62263   AAATAAAGAGAACAA                CAAGG AAA CCGTG                TAATGTCGAAGAACT  42 10
        leuB NONE
        leuC NONE
        leuD 4030817 .. 4030854 + -18.7  -3.26836   CGTTGATACCAAAAC   GACCAGCAATAAGCGAT ACTC ATCGCTTATTGCTGGTA    TCTATCTTATTTTAA 100 35
        sgrR 4033461 .. 4033485 +  -7.2  -3.62518   ATAATGCCGGCGAAG          GGATTTGAGG TTACC TCTCAAGTCC          TTTGCCACTCTTTCA  67 151
HF553_RS19655 NONE
        thiP NONE
        thiQ 4037255 .. 4037271 +  -6.5    -3.273   GGATCGTGAACATAC              TGTGCTG ATG CAGCGCG              TGTTCGGTTTTATCC  56 507
        araB 4040599 .. 4040609 +  -2.4  -3.48529   GACTCATTAAGGACA                 CGAC AAT GACG                 ATTTTTGATAATTAT  47 31
        araA 4042116 .. 4042153 +  -5.5  -2.62263   CGCTAAAAGTGGAGT   CTGAATGCCCGGTGGCAC TGC GT-TTACCGGGCCTACGG   TCCTGTAGGCCGAAT  50 35
        araD 4042955 .. 4042974 + -12.8  -3.20858   TAATGCCTCTAAAAA            CGCGTCCC ATTG GGGGCGCG             TTGATGAGTCTGGTC  86 38
HF553_RS19705 NONE
        polB 4047164 .. 4047193 +  -3.5  -2.66435   CCTGGACCTAATTAA       CGCCACTACCA CATTAGCC TGGTAGCGGGG        TCGTATACTCGCAAT  42 88
        rapA NONE
        rluA 4051160 .. 4051198 +  -8.7  -3.21099   GGCATCTTCCAGCGT  CGGGCCGCGCTGCGCCTG CTGC CAGCCGCCGC-CGGACTG   TTGATGATAACCGCC  65 333
        lptD 4054390 .. 4054400 +  -8.2  -3.35813   GATTTACAACATAAT                 CCGC ATT GCGG                 TTAATTGAAATGGAA  65 48
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH 4058777 .. 4058832 +  -3.3  -3.53811   TGCCTGATGGCGCTA CG-CTTATCAGGCCTACATCCG-GCTA CATC TGGCTCAAGAGTAGGCCGGATAAGGCG TTTCGCCGCCATCCG  50 49
HF553_RS19780 4065935 .. 4065946 +  -3.6  -4.11371   AAATGCTATCACCAT                GGGT CCCT GCCC                 TTTTACCCCCTCTTG  60 408
        caiT NONE
        caiA 4074853 .. 4074886 + -13.1   -2.8294   TGATAAGACGCGGGG     CGTCGCCATCAGGCA ATCA TGCCGGATGGCGCTG      TGCTTATCCGGCCTA  85 58
        caiB 4076146 .. 4076192 +  -7.3   -3.6682   GGCCAAAGTTGAGGA TTAAACGCGATGCGCTAATCGG TTTT CCGGTTAGCGC-TCACGCCTGA TTTCAGTGGATAAAG  67 22
        caiC 4077767 .. 4077797 +  -3.1  -2.76418   AAAATCTGAAATAAA       CCTTCCGGCAGGA ATCCC TCCCGCCGGGAAA       CTATTTATCTGGAGA  43 27
        caiD 4078630 .. 4078672 + -13.6  -2.60496   CCGGATGGCGCTTCG CTTATCCGGCCTACAG CACATGCGCAA CCGTAGGCCGGATAAG GTGTTTACACCGCCA  86 51
        caiE 4079528 .. 4079549 +  -5.1  -3.53224   TCAATCGGCGATAGA           GTTGAGAGT CGAT ACTCACGAC            TTTCACCAGACGCTG  55 243
        citN 4093283 .. 4093293 +  -2.4  -3.24232   TGATGGTGTAAAAAA                 ACGC ACG GCGG                 TGTCTTTGCCGCAAA  44 30
HF553_RS19910 NONE
        oadA NONE
HF553_RS19920 4096786 .. 4096808 + -12.1  -4.27192   CGATGTAATAGTGGA           TGGGATACG CATGT CGTATCCCA           TTTTCATCCAAATTT  95 33
HF553_RS19925 NONE
HF553_RS19930 4099561 .. 4099581 +  -3.2  -3.89346   AGTTTACTCAGAAAA            TCTGGCGA GAGCA TTGCCTGA            TTTGTAACGTCCAGC  54 366
        rpsT 4108078 .. 4108092 +  -8.5  -5.64274   AGCTTTGTAGAAAAA               CCCGC GTAAA GCGGG               TTTTTTTATGCCTGC 100 57
HF553_RS19980 4109906 .. 4109919 +  -3.8  -2.91276   CCCTCGAATATGGGA               GGCA CCACCA TGCC                ATTTATGCAACAAGA  46 56
HF553_RS19985 4111959 .. 4111991 + -14.9  -3.06671   TGAATTTGTAGAATG      ATTCCGGCTGCGG GTTAGTA CCGCAGCCGGAAG      TATTACGGTAGGTAT  89 30
HF553_RS20020 4121589 .. 4121621 +  -9.2  -4.74052   TTACTTAATTTCCCC      GGTTTGTAGTCGTG AATGA CACGACTACAGGCA      TTGTTTTTCTTTAAT  90 63
HF553_RS20025 4123229 .. 4123259 + -16.3  -2.87274   GCAAATAAGCCATAA       TGTTATGCGGTCG ATAAC CGGCCGCATAACA       TACTTAGTTATGCAA 100 33
HF553_RS20035 4126037 .. 4126054 +  -2.7  -5.16472   AAAAAGAAAGGTCGA             CTGAAAT GTTG ATATCAG              TTTTTTGACATTTTT  73 114
HF553_RS20045 4127889 .. 4127903 +  -4.2  -3.49738   CGGTTCAGTCATAGA               CAATGC GTA GCACTG               TTAATTGCTTATCTT  52 136
HF553_RS20110 NONE
HF553_RS20115 NONE
HF553_RS20140 4149466 .. 4149480 +  -2.8  -3.70022   GACTTAAAGTCATTG               GCGA CGATTAA TCGC               TGTTATTTCTATTCC  50 15
        msyB 4150237 .. 4150260 +  -8.2  -3.69395   GTGAATGCCCTCACT          GGGGGAAA TATTTTCT TTTCCCCC           TTATTAGATCATAGA  69 37
        satP 4150946 .. 4150978 +  -7.7  -2.67903   AGGCGCACTAAATCT      CTTTTATTCCTCCCG CAC CGGGAGGAATAACCC      TACTATCAGTATTTT  59 30
HF553_RS20165 4154388 .. 4154410 +  -4.2  -3.05463   TCAACTCTGCGGCGT           TTTTTTGCTA AAG TCGCAGAAAA           TTCCCTGCAAGGACT  47 62
        yaaA 4155257 .. 4155296 +  -9.3   -3.1505   CAAATCGACACCACC CCATAG-GCCCGGTAAGCG ACAG CGCC-ACCGGGCGCAATGG  TTACTGGCGGGTCAT  70 79
        arcA 4162407 .. 4162433 + -13.1  -4.30719   GCCAAACCGTAAAAA         CAGCCGGTAAG TTATT CTTACTGGCTG         TTTCTTATGCCCCCC 100 53
HF553_RS20210 4162987 .. 4163032 +  -8.9  -4.70046   TCCCGCCGGGAGGAG TTCCGGCAGGCGGCGATTTCGC TCA GT-AAAACGCCGCCCGCCTGCA TTTTGTACTTTTCTC  90 52
HF553_RS20215 4164286 .. 4164302 +  -5.3  -4.56358   GAAGCGCATACAGAG              TAAAATA TAA TATTTTA              TTTTATATAGCTATC  71 295
        sthA NONE
HF553_RS20225 4165631 .. 4165647 +  -5.8  -2.59742   TATGGGATGAGTTTA              GAGCCG CATTC CGGTTC              ATTCTAGCCATTAAC  50 2
HF553_RS20230 4168220 .. 4168236 +  -2.1  -2.64747   GGCGTAGAAATCTTA              CACGAGC AAT GCCAGTG              ATTCTGGTGGGATAA  39 8
HF553_RS20235 4168828 .. 4168844 +  -2.2  -2.65504   CATCTTTCTATTTCA              CCTGAT ATAAA AGCAGG              AATTTTTCATGAGAA  39 41
HF553_RS20240 4169953 .. 4169989 +  -8.6  -3.41807   ACGGCATCACATTTT   CTGGCGCTGCGCGGGAA AACG TTAACGCGC-GCGCCCG    TTAGATTTATTTCCA  69 40
        robA 4175517 .. 4175547 +    -6  -4.37886   AGGTGATATCACACC       CGCACGCCTGGG CGATAAT CTCCGCCGTGCG       TTTTGTGCGGCCTAA  73 459
        yjjX 4176470 .. 4176502 +  -4.6  -4.13945   GGCTGTTTGACCCGC      GCGTGATGGTGGCG ATGCC CGCCCCCAGCTCGG      TTTTCAACTCGCGCT  62 204
        ettA 4181062 .. 4181081 +  -7.2   -4.4891   TGCGAAATCAATATA            TTGCGCATG GCC CA-GCGCAA            TTTTATCGTAGTCGG  79 497
HF553_RS20310 NONE
        lplA 4186378 .. 4186417 +  -9.3  -3.96148   ACTTCAATTTTCCCA C-CATC-GCGCGGGCAATC TCCT GAAAGCCCGCGCTGATGCG  TTTATCATCAGCGAC  79 77
HF553_RS20345 NONE
        yjjW 4195164 .. 4195188 +  -2.7  -4.37658   TTACTGGCGCGCGGG          TAGGTGATGGT GCC ACCGACGCCGA          TTTTATAGCCCAGTT  62 284
        rsmC 4202600 .. 4202612 +  -9.1  -3.30243   CATGTGCCGGATGGC                GACGC AAA GCGTC                TTATCCAACCTACGT  71 72
HF553_RS20400 NONE
HF553_RS20405 NONE
HF553_RS20410 4203367 .. 4203377 +    -4  -4.64846   AATGATAACCAATAT                 CATA TGA TATG                 TTTTCTCATTTGTCA  69 330
HF553_RS20420 4204722 .. 4204732 +    -4  -2.76885   TATCGCTATCGATAG                 GATT AGC AATC                 ATTATCATTTAGATT  45 101
        fhuF NONE
HF553_RS20430 4206659 .. 4206685 +  -6.4  -3.28745   ATTTATCGCCAGTTC         CGTCAGGCTGGA TAA TCCTGTCCGGCG         TTCAGTTCTTAACGC  59 520
HF553_RS20445 NONE
HF553_RS20450 4209531 .. 4209544 +  -3.7  -2.85545   CCCCCGCGTGTGAAT               GGTGG AACG CCTCC                TGCTGTTCTTACAGG  46 28
        dnaT NONE
        dnaC NONE
HF553_RS20465 4211626 .. 4211640 +  -4.2  -3.20751   GTTATTAGAATTGCA               GCAATG TGA CATCGC               TATTACATTGTTAGA  48 232
        opgB 4214118 .. 4214145 +  -7.6  -3.03124   AGTGTGAACATCTCA        TCCGGCCTACGG TCGT CTGTAGGCCGAC         TGTTCACCACTACGC  60 150
        btsT 4218383 .. 4218411 +  -7.5   -4.3255   TCCCGGCTAGTGTAG       GCCGGATAAGGCG CAAGC CGCC--ATCCGGC       TTTATTCATTAACAG  77 67
HF553_RS20485 4218615 .. 4218635 +  -3.2  -3.14344   TTACGGCGGCGATGG            CAAAGGCG GTATG CGCTGTTG            TTAATGGAGAGACTA  46 1
        yjiA NONE
HF553_RS20495 4220482 .. 4220501 +  -7.9  -3.25823   GCAGGTATAGGCTGA            CCTCAGT ATCATC ACTGAGG             TTACTATGGAACAGG  64 48
HF553_RS20500 4221281 .. 4221296 +  -4.6  -4.35483   CCAGAAACCAATAAA              GCGACT AAAT AGCCGC               TTTATTCTCATCACC  66 158
HF553_RS20505 4222500 .. 4222536 +    -6  -4.30809   CAGGATATCCGCCTA   CTGGAGAGGTTAAGATA AGAT TATCC-AGCCTTTCCAG    TTTTACTGACTCTTA  73 46
HF553_RS20515 4223150 .. 4223178 +  -3.8  -3.35046   GGCCGTAGTGGGAAT        CGTTGGCGAG TTTTACCGC CTCGTCATCG        TCTTTCACCACATAC  49 345
        mdtM 4227152 .. 4227185 +  -4.5  -2.73364   CCGCTGAGAAGTAAA     CACTCTGCCGGATAG AGGC TTATCCGGCACAGGA      TAATCTGATGTTTTT  47 27
HF553_RS20535 4228563 .. 4228579 +  -9.5  -2.72144   ACCCCGCACGTGGGA              GGCATTA ATT TAATGCC              ATTTCCCACCGATGC  69 80
HF553_RS20540 4229935 .. 4229945 +  -4.6  -3.76232   AGTAAACCCGCGCTA                 TCCG CAC CGGG                 TTGTATCTTTAACGC  58 48
HF553_RS20545 NONE
HF553_RS20550 NONE
HF553_RS20555 4233117 .. 4233131 +  -5.6  -3.28712   CTGCTAGTTTCAGGC               TGCCCC ATC GCGGCA               TTCTGAAAGAGGACG  56 44
        hypT 4234335 .. 4234363 +  -8.2  -4.37658   AATAAGGCTATCGAT       TTGCGGCAGC-AGC AGC GCTTGC-GCCGCAG       TTTTATCACCACGTT  81 235
        trpS 4237483 .. 4237504 +  -4.3   -3.7642   CAGGTGCTGCCACAT           CGCCAGC TTCGCTGC GCGGGCG            TCTTTCTTAATTAAC  55 143
HF553_RS20585 4239347 .. 4239357 +  -8.2  -3.66178   TGCGCCAGCATGAGA                 GGCG TTC CGCC                 TTTAGGATTGCCAAA  68 209
HF553_RS20605 NONE
HF553_RS20610 4244096 .. 4244125 + -10.2  -2.75343   CGATAACGTGAAGCA       GGAGGTATAGCCT ACAAG AGG-TATACCTCC       ATTTAAAAGTGTGCA  71 35
HF553_RS20615 4245370 .. 4245404 + -13.9  -3.89501   ACCTCTAATTATAAA     TTAAACAAATCTGTC TCTAT GGCAGATTTGTTTAA     TTTATAAAGCTGTTA 100 33
HF553_RS20645 NONE
HF553_RS20670 4262343 .. 4262359 + -10.8  -3.69605   TCTGATATGAATAAA              CCCGCC AGGAC GGCGGG              TTGGTTTTCAATAAA  83 139
HF553_RS20680 4267594 .. 4267606 +  -3.4  -3.63464   GGACGTTGAGTTCGC                CTTC CGCAT GAAG                TGTTGTTGTTTCAGG  51 15
HF553_RS20685 NONE
HF553_RS20690 4270984 .. 4270997 +  -3.7  -3.08996   ATCCGTGAACAGGAA               CGCGC GCGA GCACG                TATTGGATAAAAATA  47 2
HF553_RS20695 NONE
HF553_RS20700 4275674 .. 4275706 + -17.8  -4.55128   GGTAAAAAAATACAA      CGACCAACCAGCCC GATAA GGGCTGGTTGGTCA      TTTTAATTTAAACAT 100 205
HF553_RS20715 4278682 .. 4278692 +  -5.4  -3.54129   CGGTCGCTCCAGCGC                 GTCA AAC TGAC                 TTTGCAGCAGGTCTG  55 182
HF553_RS20725 NONE
        idnO 4281136 .. 4281153 + -12.7   -3.6581   CCAGGGAAATACGAC             GCAGCGC GTAA GCGCTGC              TATTTTGGCGCTAAT  95 41
        idnT 4282486 .. 4282497 +  -2.2  -3.41693   CGTACTGGCGCTGAA                TGCG GTTC TGCA                 TTAATTCATCATCCG  45 10
HF553_RS20740 4283723 .. 4283758 +  -2.5  -2.59267   GGCCTACGGGTCCGG    AGTAGGCCTGAAAAGC ACAGC GCCAT-CAGGCCTACG    ATTACTGTGATTACG  40 185
        pepA 4287895 .. 4287931 + -11.6  -3.30124   TGATAAGGCGTATTA   GCGC--CGCCATCAGGCG TTT TGCCGGATGGCGCTGCGC   TTATCCGGCCTACGG  83 63
        holC NONE
HF553_RS20765 4291406 .. 4291425 +   -15  -4.66609   ACAACATGAATTATG            GGCCGACG TAAA CGTCGGCC             TTTTTACATCAGATA 100 139
HF553_RS20775 4293366 .. 4293406 +  -8.6  -3.61894   TTATTTTTGCTGATA TAAGTAAT-CCCGGA-AACA TCC TGTTATCCGGGAATCACTTA TTATTCAAGGAAGTT  72 72
HF553_RS20780 4294006 .. 4294022 + -13.7  -3.72576   GAGTGAGTTCTTTTT              GCCTGCC GCT GGCAGGC              TTTACTCAGAACAGA 100 117
        argF 4296733 .. 4296751 +  -5.2  -4.46212   AACACCACAAAGTCG             CCTTCGTT CAG GACGACGG             TTTTCTCGTCGACGC  70 202
        arcA NONE
        arcC 4299937 .. 4299949 + -10.5  -3.63515   GGCTTTTTACCGGAT                GGCGG CTT CCGCC                TTATTCGGCCTACAG  78 41
        argF 4301044 .. 4301072 + -13.2  -2.62184   GGCGACTAATCCCAC        AGGATATGCGCC CTCGC GGCGCATATCCG        TGATATCAGGAGAGA  84 32
HF553_RS20820 4302507 .. 4302517 +  -4.6  -3.28791   TGTAACGAGCCAGAT                 GGCG ACG CGTC                 TTATCCGACAGGACT  52 36
HF553_RS20825 NONE
        pyrL 4303351 .. 4303368 + -12.7  -5.75342   GAAAGCCAATACCAA             GCCCCTC AATT GAGGGGC              TTTTTTTTGCCCAGG 100 13
        pyrB NONE
        pyrI 4304801 .. 4304818 +  -3.4  -3.32844   ATAATGTGGTGCTGG             CCAACT AATGGG GGTTGG              TTATGAGATCCCGGC  48 18
        ridA 4305313 .. 4305338 + -12.7  -2.72839   GGCGCTATCGCTTAT         TCGGCCTGGTAT GCC AT-CCAGGCCGA         TAATTCACAATACTT  82 67
        treR 4309451 .. 4309464 +  -2.3  -4.56775   ATCTTCGCCGTGTTT               CGGGA ACGT TCCCA                TTTTTAAACCAACGT  61 77
        treB 4310961 .. 4310986 +  -6.7  -2.71011   AATTGTCTAATTCTT         CTTCGGGGCGC AGTT GCGTCCCAACG          TACTTGCAGGAAACT  55 31
        treC 4312897 .. 4312928 +  -8.2  -2.54896   CACGCCGACCCAATA      TGTTGTATTAATTG ACTA CAATTGCTACAACA       TCCGTTCACTCGACA  59 265
        nrdD 4315238 .. 4315249 +  -5.8  -3.33261   TAAATGCCGGATGGC                GGTG TAAA CACC                 TTATCCGGCTTACAA  56 59
        nrdG 4316245 .. 4316263 +  -7.4   -4.1899   ATCAATGCATCTTCA             CTGTCGCT AAG AGTGACGG             TTTTCACTGGCATGC  74 385
HF553_RS20955 4326759 .. 4326777 +  -5.9  -3.53811   CGTCCGAGTAACTCC             CGCTCGA TCCGC TCGCGCG             TTTCCACCGCCTGAA  57 100
        iolC 4335464 .. 4335492 + -16.7  -3.02043   ATGCCTGCCTCATCA        CGCCCCGTGTCTG CAT CGGACAAGGGGCG        TGTTCAAGGACGATT 100 40
HF553_RS20990 4337085 .. 4337100 +  -6.1   -4.1552   CCGATCGGCTCAAAG              GCCAG CCGCAT CTGGC               TTTCTTCCGCCACTG  67 434
        iolA 4343912 .. 4343922 +  -6.8   -3.2048   TCGGAGTTCAGTATG                 CCGA CTC TCGG                 TTAATACGCTTTCAG  59 11
        iolB 4344782 .. 4344804 + -12.7  -5.46657   GTTGAGTGGTACTTT           GCCAGCCGT CCTCT GCGGCTGGC           TTTTTTATTCAACTC 100 47
       iolT1 4348451 .. 4348486 + -12.8  -5.53991   GATTAAGTTTCACCA    CAATGCCGATGATCG CTAAATA CGATCATCGGC-TTG    TTTTTTTACTCCGTC 100 35
         fbp 4352398 .. 4352433 +  -7.5  -3.23274   CGGAATAACGCATGA    AGCCGCCATTAGGCA ATAACA TGTCCGATGGCGGCG     TTGCCTTATCAGGCC  62 55
         ppa 4353155 .. 4353176 + -10.9  -5.11063   AATCGTCAAGATAAA           GGCTCTCAT AGTA ATGAGGGCC            TTTTTATTGGCTAAT 100 55
HF553_RS21065 NONE
HF553_RS21070 4355931 .. 4355948 + -12.7  -3.14878   GAATGTAAAAAACAA             CGCCACC CGAG GGTGGCG              TGTTCAGTTCAGGGC  86 53
        msrA 4362754 .. 4362775 +  -5.1  -4.41895   CTAGCCCTGAACTTA           TCGGCTC ACTGCTAC GAGCCGG            TTTTCATTAAACGTT  68 115
HF553_RS21095 4364214 .. 4364234 + -16.9  -6.31682   TGCCAGAAACATCAA            CGGCTCCTG ATT CAGGAGCCG            TTTTTTTTTACTTTT 100 49
HF553_RS21105 4365529 .. 4365546 +  -5.5  -3.53012   AAGCTGCGCCTGGCC             TTCCGCC ACAA GGCAGAA              TTTCAGCGAGGAACC  55 189
HF553_RS21115 4368319 .. 4368372 + -19.3  -2.78816   AACGTGAGTCCCGTA TGGC-GCT-GCG-TTTATTCGGCCTG ACTGA CAGGCCGAATAAAGCGCTAGCCGCCA TCTGATAAACGCTCC 100 39
HF553_RS21125 NONE
HF553_RS21130 4370709 .. 4370728 +  -7.8  -2.98493   CGGAAAAAGCGACCG            TCGTTCCG GTCA CGGAACGC             TAATTTCATACTCGC  62 3
        ytfE 4371995 .. 4372018 +  -4.6  -4.07568   TTTCGCCGGTACCGC          GCGTTTCGATA GCT TAGCG-AACGC          TTTTGGCGCCACGCC  62 524
HF553_RS21150 4374829 .. 4374850 + -10.2  -3.61398   TACCCTATTCGTTCA           GGTGAAGC ATTACC GCTTCACC            TTATTCACCCACCAA  78 66
HF553_RS21185 4378134 .. 4378151 + -12.7  -5.00616   AGCCATAGTTGATTT             GCCCCCT GAAC AGGGGGC              TTTTTTCGCGGAAAG 100 62
        ulaG 4384070 .. 4384087 + -12.7  -4.83759   TGTGAGTCGATATCA             TGCCGGG ATTA CCCGGCA              TTTTTCCATTTACTT 100 36
        ulaR 4385034 .. 4385051 +  -3.3  -3.64703   TCGCCCCGGCGAGTG             CCTGCTG GAGC CGGAAGG              TTTCGATAGCAGGCA  51 141
        bsmA 4386186 .. 4386198 +  -2.7    -3.192   TCAATAACAGTAGAT                TGATT TTT AGTCA                GTTTTACATTGCTTT  45 34
HF553_RS21240 4386904 .. 4386927 +  -3.1  -4.36914   CGCAAAAGCTTCACT          CAATACGTC ATAGAC GCCGTGTTG           TTTTGTCAGCACCCG  62 346
        queG 4410296 .. 4410310 +  -8.6  -3.76413   TGCGATTGGTGGTCT               GTGCTT AAC AAGCAC               TTTCAAATTTTGGAG  75 502
HF553_RS21370 4411662 .. 4411696 + -11.5  -3.04144   CAGTGGCGGGAGAGC    TGCCGGAT-GAGACGC TCTG GCGTTGCCATCCGGCA     TGTTACGCCTCACAG  79 43
        rsgA NONE
         psd NONE
        mscM 4417794 .. 4417808 +    -7  -3.86015   AGCGGGTAAAACCAG               CCGCCC GGC GGGCAG               TTTGTAAACGCAATG  66 4
        frdA NONE
        frdB NONE
        frdC NONE
        frdD 4424580 .. 4424608 + -17.6  -5.83211   TCTAAGTTGCCACGA        CGCCCTCTTATC TACCC GATAAGAGGGCG        TTTTTTCTTTTCCTG 100 36
HF553_RS21430 4425375 .. 4425394 +  -3.4   -4.4078   GGTCCAGATGGCGTA            CGCCGTTC CAAC GGGCAGCG             TTTTCATTGCCCAGG  64 186
HF553_RS21440 4426831 .. 4426852 + -10.1  -4.59773   GCGCGAAAAATAGGA           TGGCGCAGC ATAC GCTGCACCA            TTTTTCCCGATAACG  91 465
        epmB 4428574 .. 4428603 +  -4.9  -2.80966   AGGAGATTCCCCCGC       GATTCTCCTCACC CTCT GGCGAGGATAAAC        TAATCTTCGTTAAAT  49 92
HF553_RS21465 4430125 .. 4430148 + -13.8  -4.00066   TGACTAAAAGAAAAA          CCCCCGGTCA TTTC TGCCCGGGGG           TTTCTCAATTCTGGG 100 504
        yjeH 4434117 .. 4434142 +  -2.5   -5.4833   ACTCTTAATCATTTC         T-GCCGCCGG GCTCTCA CCGGCCGCCA         TTTTTTGTTGCATCA  85 351
        aspA 4436126 .. 4436146 + -15.5   -5.4505   GGGTAGTACCAAAGA            GGCACGTCA CGA TGACGTGCC            TTTTTTCTTACAAGA 100 48
        dcuA 4437530 .. 4437552 + -14.8  -3.30635   TGTAAGTGTTTCACC           CGCGGGGCGT ATC ACGCCCCGCA           TTCTCCCGCCCTTTG 100 36
        cutA NONE
HF553_RS21510 NONE
HF553_RS21515 NONE
HF553_RS21520 4440483 .. 4440502 + -13.6  -4.98531   CCAAATTCATATCAA            CGGACCTC CACG GAGGTCCG             TTTTTCGTTTCAGAA 100 38
HF553_RS21525 4441934 .. 4441960 + -19.5  -3.74658   CCATTAAAATAGTAA         GCAGTCCGGGC AATCA GCCCGGACTGC         TTTAACTGATTATTT 100 29
HF553_RS21530 4446069 .. 4446089 +  -6.9  -3.55453   CGGTACATTCCTCTC            CCCGTTA AAAACCA TAACGGG            TTCATTATCTTCGTC  60 197
        dptF NONE
        dptG NONE
        dptH NONE
HF553_RS21560 NONE
HF553_RS21565 4457929 .. 4457952 +  -2.6  -3.24924   TAAGATAATAATACC          GAATATAAATC TAA GAT-TATGTTC          TATTATCGATGGACA  45 46
HF553_RS21570 4458778 .. 4458818 + -11.3  -3.82205   AAATTGACTAAATTT  TGTTCAGGCCATCCATATT GTT AATTTGGATGGCCTAAAAA  TTCTTAATCTATTGA  91 40
HF553_RS21595 NONE
HF553_RS21600 4465207 .. 4465226 +  -4.9  -2.91274   CCAGCGTAATACCAC            CGGCGAG GATGGA CTGGCCG             TGTGATTACGCTCAG  46 371
HF553_RS21640 4472784 .. 4472804 +  -5.5  -3.28783   CCTGAAGAAGATGAA            CAGTTTATA CTC TTTAAACTG            TTCCCTTAATTTTAG  56 42
HF553_RS21650 4476262 .. 4476276 +  -5.7  -3.58522   TATTCCTGATTATCC               GGATG CGACA CATCC               TTTCAACATCATGAT  59 148
HF553_RS21655 NONE
HF553_RS21660 NONE
HF553_RS21665 4478109 .. 4478134 + -13.3  -5.09521   CATTTCATCCATCAG         GCCGCGTCTTC TCCG GGAGACGTGGC          TTTTTCATTTATTAC 100 48
HF553_RS21670 NONE
HF553_RS21675 4479261 .. 4479282 +  -7.3  -3.21276   TGATATTGCCGGGTC           TCACGGTCA GTGA TGAACGTGA            TGTTGTCAGCCCCCG  62 38
HF553_RS21680 NONE
HF553_RS21685 NONE
HF553_RS21690 4480611 .. 4480625 +  -4.3  -3.28712   GAGCCAGGAAGGGAA               TTCTG ATGAA CAGAA               TTATCACCACCACCG  52 39
HF553_RS21695 4481282 .. 4481300 +  -3.8   -2.5758   ATCGTTAAACTATCA             TTCACCGA TTT TCTGTGAG             GATTTTATCGTGTCA  44 47
        cbtA 4481703 .. 4481724 + -10.1  -2.55811   ATAACCTTCTGCTCC           GGCCTGGTG TTTT CACCACGCC            ACTTTTCCATTTTTC  70 50
HF553_RS21705 NONE
HF553_RS21710 4482650 .. 4482669 +    -8   -2.5076   TCTCCAGACAACCAA            TATCACTT AAAT AAGTGATA             GTCTTAATACTAGTT  59 42
HF553_RS21715 NONE
HF553_RS21720 4484205 .. 4484227 +   -12  -4.61873   ACTTCATTCCACTGA           CGCCAGCC TGAATAC GGCTGGCG           TTTTCGTTTATAAAC 100 55
HF553_RS21725 4485248 .. 4485264 + -13.7   -5.1417   CCACCATTCAGAAAA              CCCAGCC TAT GGCTGGG              TTTTTGCTTTTCTGA 100 171
HF553_RS21735 4486794 .. 4486835 +  -3.9  -2.57132   TTAAAATTGTGTAAG TGCCTGTTTTTGATA-TG TTCACTC CAGTAACAGAGACAGGCA ATTATGGACGAAAAG  44 123
HF553_RS21755 4490735 .. 4490760 +  -2.7  -4.98531   AGCTATATATTAGTT         TTCTTTTGAAA TATT TTTCAGAATAA          TTTTTGATTTACACG  70 226
HF553_RS21760 NONE
HF553_RS21765 4491940 .. 4491951 +    -3  -3.22832   TGAATGAGTTTTACA                TATC AGTC GATA                 TTACGTAATTTTTTC  45 6
HF553_RS21770 4492234 .. 4492245 +  -2.2  -3.05343   GTCCGCCGAACCAAC                GTTG GGAT CGAC                 TGTTAACAGTCTGGA  42 62
HF553_RS21775 NONE
HF553_RS21785 4495757 .. 4495770 +  -2.4  -3.04263   TACAGGCTAATAGCA               TCAG GCCAAA CTGA                TCTTCCGGCTCGCGT  42 333
        dcuS NONE
        dcuR 4502896 .. 4502910 + -11.4  -4.98531   TATTTTCTATTATTA               CAGCGC TCT GCGCTG               TTTTTAATTTCAAAA 100 181
HF553_RS21820 4503363 .. 4503383 +  -5.4   -3.8505   GTTAATCGTCGCCAC            TGGCGCAT TGAAT ATTCGCCA            TTTCCTGATGTTCAT  61 65
        dcuB 4504846 .. 4504869 +  -2.4  -3.19848   TTATGCGCGGCGCGC          GACTTA-GAGC CTG GCCCATGAGTC          TCTTAATACATTTTC  44 61
HF553_RS21830 4506597 .. 4506622 + -11.9  -3.30124   CGTTATCGGTTAATT         GCCGGATG-GCG CTA CGCTTATCCGGC         TTATCCGGCCTGCAC  85 70
        melR 4510864 .. 4510893 +  -6.5  -3.14344   ACTTTACACCCCCTA       TTTGACG-GGGTAA TAC TTGCCCACGTCACA       TTCATACGGCGGGTC  57 169
        adiA 4513300 .. 4513319 + -12.1  -5.60993   CTGTCATACCTTTTT            GCGCGGG CCCCAT CCCGCGC             TTTTTTTATACAAAA 100 105
HF553_RS21855 NONE
        adiC 4515828 .. 4515842 +  -2.9  -4.61873   ACCAACATTAAGTTC               TTAAG GTTCA CTTAA               TTTTACTTTGTCACG  65 97
        eptA NONE
        pmrA NONE
        pmrB 4519596 .. 4519606 +  -8.2  -4.08064   ATGTCCGACGCCGCT                 GGCG TTG CGCC                 TTTTAGCGGACGATT  77 343
HF553_RS21890 NONE
        yjdN NONE
        phnO 4523007 .. 4523018 +  -3.6  -2.94232   TGGATAAAGGTTAAA                CGGG CTGA CTCG                 CTTCTTTAACAAAAA  44 133
        lpxO 4524069 .. 4524102 + -18.9  -3.55219   AGCCTCCTCTGAAGC     CGGGCCGCGGTATGGC ACT GCC-TGCCGCGGCCTG     TTCTATCCTGGCGTT 100 29
        fdhF 4526665 .. 4526684 + -13.6  -5.64274   GCATTTTCCCTATAA            CAGCCTCC GCCC GGAGGCTG             TTTTTTTATCCATAC 100 123
HF553_RS21915 4527475 .. 4527527 +  -7.9  -2.58758   TTATAGGCCTGATAA GCG-T-A-GC-GCCATCAGGCAACCCG GAG CAGGTTGCCGGATGGCAGCGTGAACGC CTTATCCGGCCTTGT  59 67
HF553_RS21920 4528718 .. 4528753 + -18.6  -3.95348   GTGGGATGAAAATTA    TGTAGCTACCG-CTTGA CGT TCAAGACGGTAGCTACA    TTCTCTTTCTCTGTA 100 10
         acs 4539656 .. 4539671 +  -3.2  -2.80816   CGAAAGACGCAGGGG              GACCTC TGGA GAGCTC               TGTGATGAATGACCA  43 251
HF553_RS21970 NONE
        actP NONE
HF553_RS21990 4543909 .. 4543923 +  -8.6  -3.01918   CGTGCAGCAGCTTTT               GCAATG TTT CATTGC               TGATTTCTCGCGTGG  60 176
        soxS 4549181 .. 4549208 + -11.2  -4.30719   CGCCTGTAGGGCGTC        TGCCCGCGTATC GTCA GAGGCGCGGGCG         TTTGTTGTAGCCAGG  93 32
HF553_RS22025 4551814 .. 4551834 + -11.2   -5.4505   TTAAATGACAAAAAA            GACCCGTT TGTGC AACGGGTC            TTTTTTATTAAGCAG 100 233
        uvrA 4579946 .. 4579981 +  -9.7  -4.77036   ATGCTCAAATAACCT    TCACGCCGCTTTCCG ATTCGC CGGGAAGCGGCATCA     TTTTTCCTCATCCCA  91 29
HF553_RS22070 NONE
HF553_RS22075 4581043 .. 4581057 +  -4.2  -4.07885   GGCGTAACAACTCTG               CCAGTT CCG GGCTGG               TTTTGAGAGAGGCTG  62 214
HF553_RS22110 4587625 .. 4587655 +  -5.6  -5.80364   TAATAGCTCTGCAAA      GAAATTGGGCTTCC ACCCG GGAAGCCC--TTTC      TTTTTTTGTTCGGCT 100 38
         zur 4591467 .. 4591493 +  -5.3  -2.94422   ATATTACCAGCGATA        GTTGTT-AC-GGG TTT CCCAGTCAACAAC        CTCTTTTTCCGCCTG  50 137
        plsB 4597384 .. 4597394 +  -6.8  -2.78384   ATCTCTGTCGACCAT                 CGCA TAT TGCG                 TATCGTAAGCCACCG  52 433
        malE 4603854 .. 4603865 +  -5.8  -3.30124   CCTGTGCCGGATGGC                GGCA TAAA TGCC                 TTATCCGGCCTACAA  56 50
        malF NONE
        malG 4606491 .. 4606506 + -10.4  -5.66684   TATGGTCGTATTTTG              GCGCTC TTCG GAGCGC               TTTTTTTATGCGTTA 100 106
        lysC 4615029 .. 4615041 +  -3.4  -5.37865   AAAATTGAGATCGTT                TGGT ATAAA ACCA                TTTTTTCATTGTTGC  81 324
HF553_RS22240 NONE
HF553_RS22245 NONE
HF553_RS22250 NONE
HF553_RS22255 NONE
HF553_RS22260 4619533 .. 4619546 +  -2.3  -4.60258   ACGCCGACGCGCGGC               AGACG TTAA CGTCC                TTTCTTCTTTCGTCC  64 17
        pepE 4621908 .. 4621959 + -18.8  -3.79043   CCTGGCCACATTGAA TGCCGAATGGC-GGGCCTACGCGCA TGT TCTCCGTAGGCCCCGCCATCCGGCA TTTCACTTAATACTC 100 43
        iclR NONE
HF553_RS22300 4629537 .. 4629551 +    -7  -3.12668   CAGCCAGATATTGAG               CGGCAC CAT GCGCCG               TTCAATATAGAGATG  54 478
HF553_RS22325 4635915 .. 4635956 + -17.5  -3.76224   CCGACAGACCACAGA TAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTA  TTTGATGCCTGGCAG 100 310
        purH NONE
        purD 4644817 .. 4644844 +  -9.7  -5.00616   GTAATGCCCAATTGA        CGGGCGGCTTC CGTTTT GTTGCCGCCCG         TTTTTTCCAGCGCCG 100 71
        zraP 4648216 .. 4648239 + -16.8  -3.08679   GGTAAAGCATGTTTG          CCGAATGGCG GCTT CGCCATTCGG           TATTCCATCAAAAGG 100 36
         rsd 4653212 .. 4653234 +  -6.8  -3.75378   ACGGGTAGTTTACTT           CAGCCCCCTC TTC GGAGGGGCGG           TTATCTTGTCGGAGT  66 55
        thiC 4655436 .. 4655451 +  -3.2  -2.90615   CTCAAACGGGAGGAA              GCCTGA TGTA TCAGCC               TAATTTCCCAACCGT  44 20
        thiE NONE
HF553_RS22420 NONE
        thiS NONE
        thiG NONE
        thiH 4658963 .. 4658986 +  -8.8  -6.14618   ACGTAATGCGAAAAA          CGGGAGATTG TTAT CGACCTCCCG           TTTTTTTATTTTGTC 100 78
HF553_RS22445 4660339 .. 4660366 + -12.8  -3.61764   TATCCAGCATGAAGC        TGGTGGAGGG ATAAATGC CCCTCCACCA         TTTAACGATTACTCG  95 359
HF553_RS22520 4674922 .. 4674935 +  -5.3  -2.62983   TCAGGGATGGCCCTC               GTTCA TCGC TGAAC                TGATGTAGCAATAGC  48 189
        coaA 4675927 .. 4675944 + -11.3  -5.27779   AAATAACAGAAAAAA             GGGGAGT ACCG ACTCCCC              TTTTTTACTATTCGG 100 35
        trmA 4688039 .. 4688052 +  -4.5  -3.53811   TCTGCGGTGTCCTGC               TTGCG GTTA CGCAG                TTTAAAGCCAATCCA  54 91
        sthA 4690665 .. 4690676 +  -5.8  -2.52516   CCATTGCGCCACGGA                TGGC CTCT GCCA                 GTTGCTCATAACGGC  48 61
        argE 4696378 .. 4696419 + -12.5  -4.25104   ACCGGGCCTCCCCCG TCTTGTAGCTACCGTCTTGA ACG TCAAG-CGGTAGCTACATAA TTTTCATCCCACGGA 100 68
         ppc 4700656 .. 4700668 +  -6.3   -4.0056   CAATATATTCCTGTC                TGCAT TTT ATGCA                TTTGTAAATCTTTCT  66 115
HF553_RS22630 4702641 .. 4702665 +  -2.1  -3.49777   TTCGACGTTACTGTT          TCCTCTGTT TGCGATC GGCAGGGGA          TTATCATGTATCACG  47 156
HF553_RS22635 4703710 .. 4703721 +  -3.6  -4.02334   TCACATAGCGCATCC                GGGG CACG CTCC                 TTTATCCTGTCCATA  57 228
         fsa NONE
HF553_RS22645 4705551 .. 4705574 +   -14  -3.67976   ATAAGGTCTGAGCAA          TACTCCTGAC GATA GTCAGGAGTA           TTTCAGCTTGCTGAC 100 37
HF553_RS22650 4706619 .. 4706633 +  -8.5  -3.26031   AACCAAACACCAGAT               CGGCG CGGGT CGCCG               TGTATTTCACCTCGC  62 223
HF553_RS22665 4711752 .. 4711767 +  -4.6  -3.01712   GCCGTAGCCAATCGG              CGTCCC AACT GGCACG               TCTTGCACACGCAGA  49 303
HF553_RS22685 NONE
HF553_RS22690 NONE
        mscS 4719329 .. 4719341 +  -4.7  -4.08216   CACCATCTGTTCATT                CAGCG CGT CGCCG                TTTTCGAAAAAGTGA  62 420
        metJ 4723237 .. 4723263 +  -6.5    -5.055   TACTGATAGCAAAGC         ATGCGGTCAGA ACGCC TCTGGCCGCGC         TTTTTTAACGATTCC  83 35
HF553_RS22715 4725494 .. 4725521 +  -9.8  -2.72227   AGATAGTAAAAGTAA        AACAGGCGGAAG CTAA CTTCCGCCTGAA         TGGTTAAAACGTATT  69 45
HF553_RS22720 4726350 .. 4726363 +  -9.5  -5.93809   TAGAAAACAAAAAAA               GCGCC CTGC GGCGC                TTTTTTTTCTGGCGG 100 38
        priA 4729044 .. 4729054 +  -2.6    -3.494   AAGATCCATCACACT                 TTTT ATG AAAA                 TTCTGTAACCGCTTC  48 72
        cytR NONE
        ftsN 4731303 .. 4731347 +  -2.2  -3.14132   AATCTCCCCCATCTA TACTTGCATTATG-CCCCGTAC GCC GTACGGGGCCGCAATTC-AGCA TTAGTAACCAAGGGG  44 50
        hslV NONE
        hslU 4733272 .. 4733289 + -11.3  -5.07486   TTTCATCACTGTTGA             TGGGGCT GAAA AGCCCCA              TTTTTATTGGCGCTA 100 56
        menA 4734248 .. 4734262 +  -5.8  -3.08032   TTTAACTGACAAATA               TCAATT AAC AATTGA               TGATTTTGCCAACAG  52 36
        rraA 4734824 .. 4734839 + -11.8   -5.3236   CGAGTGATCAAAAAA              GGCGCC GTAA GGCGCC               TTTTTTATGCGTTGT 100 34
HF553_RS22770 NONE
        glpK 4738068 .. 4738097 +  -7.1  -2.66602   CGCCATCCGGCAAAA       TCTTTGTGCGGGG GCAA CTCCGCACACACA        TCAATTATTCCCTCC  57 44
        glpX 4739192 .. 4739213 + -10.9  -2.74122   TTGTTAGTTAGAGCC           TTCCAGCCT CGCG GGGCTGGAA            ATCTTTCTCCTGACG  74 46
         fpr 4740500 .. 4740516 +  -3.6  -3.65351   CAAATCCAGAAATCA              CGGCGT CCGAT ACGCCC              TTTAAATGAGAATAA  53 511
HF553_RS22795 4741301 .. 4741320 +  -5.6  -2.57354   CTGTTTCACAGACCA            TGCTGCTC TGAC GAGCGGCC             ATCTTCCTTAATTCG  50 80
        tpiA 4742146 .. 4742170 + -17.1  -3.34043   CTTTAGCGGGTCTTT          CCCCGGTCGCG CTT CGCAACCGGGG          TTATCGCCTGGTAGC 100 45
        cpxR 4753630 .. 4753644 +  -2.8  -3.53091   ATCTGATGGTTTCCG               CTTCAT GAT AGGAAG               TTTAACCGCGCGCAT  48 18
        cpxA 4755014 .. 4755035 + -15.9  -5.36441   CGAACCTAAAAACCA           TCGGCCTGC GAAT GCAGGCCGA            TTTTTTATCTCGCCG 100 32
HF553_RS22880 NONE
HF553_RS22885 NONE
HF553_RS22890 4760024 .. 4760036 +  -2.6  -3.28712   ATCTCGTTGCCGGAT                GGCG ATTCG CGTC                TTATCCGGCCAACGC  46 59
        rhaT 4762498 .. 4762531 +  -8.1  -3.55444   TAATCGCTTTGATTA     CTGAGATGGCGCC ATTGGCTC GGCGTCATCCCGG      TTTCCCGCGTGAACA  67 38
        rhaB NONE
        rhaA 4767368 .. 4767419 + -13.8  -3.30243   GGCCGGATAAGACGC CCGCGTCGCCATCCGGCAAT AAATGAAACACG ATTGCCGGATGGCGCTGCGC TTATCCGGCCTACGT 100 60
        rhaD 4768320 .. 4768331 +  -7.2  -3.80625   ACCTGCCAACTCAAC                GCCG GATG CGGC                 TTTGCCTTATCCGGC  68 42
        fucO NONE
        rhaM 4769891 .. 4769927 +  -9.4  -5.49579   TCTATCTGCAGTAAG   TCGTGTGCCCGGT-GGC GCAA GCTTACCGGGCCTACGG    TTTTATTTTTTGTCG 100 27
HF553_RS22945 NONE
HF553_RS22950 4771868 .. 4771882 +  -8.5  -5.10208   ACATGAACGAAAAAA               GCGCC TGATC GGCGC               TTTTTATTGGCGTTA  91 284
HF553_RS22960 4774341 .. 4774355 + -12.8  -5.26875   GCGACTGTCGAAAGA               GCGCCC CAG GGGCGC               TTTTTTCGTTCGAAG 100 99
        fdnG NONE
        fdxH NONE
        fdoI NONE
        fdhE 4781274 .. 4781284 +  -6.8  -3.93262   CCTGACAATGACGCT                 TCGC TCC GCGA                 TTTCCTGTGTTACGC  68 210
HF553_RS23000 4782889 .. 4782943 + -10.2  -3.96624   CTAAAATTCAATTTT GTTTTCAACTTGAAAACTGGATAACG TTG CGCTAAATTGTTTTCAGGTTGAAAAC TTTGTAATGGAACTA  82 37
HF553_RS23005 NONE
HF553_RS23010 4783913 .. 4783927 +  -2.8  -3.62275   AGCGACCCCAAATCA               GCCA CGGCGTT TGGC               TTTCCGCTAATGGGT  51 221
        yihU NONE
        yihT 4790487 .. 4790499 +  -3.3  -3.14564   TCGTCGATGAAATGA                TGGCG AAA CGTCG                TTAATACGAGGATGA  46 9
        yihS NONE
HF553_RS23060 NONE
HF553_RS23065 NONE
HF553_RS23070 4796146 .. 4796159 +  -9.5  -4.08064   AACAATAAAATATAA               CGCCC TGCG GGGCG                TTTTGAGAGGCGATT  81 42
HF553_RS23075 4797606 .. 4797635 +  -4.4  -3.21872   AATTAAACGACGCTT      GCCGCTTTATCCAT CCCG ATGGAT-G-GCGGC       TTCCCTATATTTGAA  50 35
        ompL 4798391 .. 4798411 + -10.4  -2.80195   CGAATCTGCATCACA            GCGGGTAG TTGTT CTGCCCGC            TCATTCATCCTGAAT  71 60
HF553_RS23085 NONE
HF553_RS23090 NONE
HF553_RS23095 NONE
HF553_RS23100 NONE
HF553_RS23105 NONE
HF553_RS23110 4804110 .. 4804136 +  -8.6  -4.87665   ACGTGAATAAAAAAA         CCCCGCCGAGTT TTC ATTTCGGCAGGG         TTTTTATCCGTAAGA  89 31
        glnA 4807929 .. 4807946 + -11.3  -5.24129   CCGTGGAAACTTTCA             GCCCATC CCAG GATGGGC              TTTTTTCTCCACCAA 100 187
        glnL NONE
        glnG 4810543 .. 4810566 +  -6.8  -3.93038   AAGATTAATAATTGA          GCGCAAAA CGCTGCTA TTTTGCGC           TTTACTGTTCCGATG  68 59
        yshB NONE
HF553_RS23155 4814134 .. 4814145 +  -7.2   -2.5294   CCGCTATGCCGGATG                GCGC CGCT GCGC                 GTCTTATCCGGCCTA  57 45
HF553_RS23165 4818516 .. 4818540 + -14.3   -5.8096   TAAAACATCTTATAA          AAACGCCGGTC AGT GACCGGCGTTC          TTTTTATTTTTTATC 100 10
        mobA NONE
        mobB 4821678 .. 4821713 + -18.6  -3.13504   AGAAAGCACGCACCT    TGTAGCTACCGTCTTGA ACG TCAAG-CGGTAGCTACA    TAATTTTCATCCCAC 100 21
        fadB NONE
        fadA 4836443 .. 4836461 + -13.1  -5.04385   TTAGTTGCCGTTTTT             CCCGCCC GTCAG GGGCGGG             TTTTTTCACCGTATG 100 181
        rfaH 4841627 .. 4841641 +  -4.2  -3.52204   GCAGATACGCGGGCT               CGTTGC GTC GTGACG               TTGGTTTCGGCGTAA  52 152
HF553_RS23320 4850715 .. 4850729 +  -2.8  -5.72118   TCGCCACGTTAGCTA               TGCTTT ACC ACAGCA               TTTTTTATATTTTTT  89 108
        metR 4855926 .. 4855948 +  -4.1  -2.72344   TGATACCCAGCGTCC          CGGCGTCTAC CTGG GTAG-CGCCA           TAGTTCCACATAAAG  45 119
        rhtB 4859478 .. 4859495 +  -3.3  -3.28712   GCGAAAATACCCCAG             CG-CGCCG CAG CGCCGACG             TTATCGCCGACAAAC  45 240
HF553_RS23375 NONE
        rarD 4864337 .. 4864369 + -14.4  -3.75532   GTAAGCATTAAATAA      TAAAATGGCAGCTA TTATC TGGCTGCCATTTTA      TGTTATTTCTTCTTA 100 30
HF553_RS23390 4865236 .. 4865266 + -16.2  -3.63922   TGATGAAGAACTTCC       AACGGACTGGCGGT TAA ATCGCCAGTCCGTA       TATTTTACAGCCAGT 100 38
HF553_RS23430 4872956 .. 4872966 +  -3.2  -2.71712   ATGTTTATACGTGGA                 TTGG CAG CCAG                 CTTTACCGAACAGCA  43 170
HF553_RS23440 NONE
        cyaY 4873858 .. 4873882 + -12.1  -3.25823   TTCGTTGATTTATTT          GCCGGATGCGC TTT GCTTATCCGGC          TTACTGTAGGCCCGG  83 33
        hemC NONE
        hemD NONE
        hemX 4879715 .. 4879743 +  -2.5   -4.3587   GCCGCGCCGCAAGGA        GAATAATGATGCT AAA AGTATTATTGCTC        TTTGTGTTGTTGCTC  60 20
        hemY 4880996 .. 4881014 +   -16  -4.91109   ATGCATAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCTGATGCGCC 100 102
        rhlB NONE
        gppA 4901787 .. 4901797 +  -6.8  -3.66178   TTCGCTCGCTTTGCC                 GCCA TCA TGGC                 TTTCAGATTAGCCAG  64 87
        ppiC NONE
        ilvY NONE
HF553_RS23615 NONE
HF553_RS23620 4908410 .. 4908426 +  -2.1  -4.56775   TTTCAAAAAAGTAGG              CTGGCGC ATC GATCCAG              TTTTTCGCCGCACGT  65 419
HF553_RS23660 4917360 .. 4917372 +  -6.2  -5.15167   GCTGGCGTAAAAAAA                GGGC ATTAC GCCC                TTTTTATTAATCATC  83 31
        hdfR 4918746 .. 4918765 + -10.8  -4.06419   TTTAGGCAAAAAAAA            TCCTTAGC AGAT GCTAAGGA             TTATTTCTGGCAGGG  86 99
HF553_RS23705 NONE
        mdtD 4927084 .. 4927102 +  -6.7  -2.52946   CCGCCCGATACCCTT            CCAGCCGC AAAC GCG-CTGG             CGTTTTGTCCAGCGG  51 395
        ravA NONE
        viaA 4938055 .. 4938073 + -10.2  -2.71712   CGACTGCCCAATCCC             GCCGCCGA TGG TCTGCGGC             ATTTCGCCGCGCAGC  66 144
        asnC NONE
        mioC 4940356 .. 4940371 +  -6.8  -3.92373   ATCTTCTTTTTAATA              G-CCCGG ATC CCGGGGC              TTTCTCCATCGGCTA  68 306
        mnmG 4942395 .. 4942420 +  -8.9  -3.04089   CCTACAAATTTGTAG         GCCCGATAAGC GAAA GCGCATCGGGC          ATTTGATTATTAACA  68 77
        rsmG 4943128 .. 4943145 +  -3.4  -3.30038   AAAAATCGACAGGTA             TAACGC ATTTCA GCGTTG              TTACATTTAACTCTG  48 84
        atpI NONE
        atpB NONE
        atpE 4945169 .. 4945181 +  -3.3   -3.4052   CGTGATGTTCGCTGT                CGCGT AGT AAGCG                TTGCTTGAATTAAGA  48 19
        atpF NONE
        atpH NONE
        atpA NONE
        atpG 4948719 .. 4948729 +    -4  -3.73968   GGGGCCGCCGCGGTT                 TAAC CAG GTTA                 TTTCGTAGAGGATTT  55 23
        atpD NONE
        atpC 4950592 .. 4950611 +   -10  -6.26417   CTTGAAAGCATAAAA            CCAGTCTG ATTG CGGACTGG             TTTTTTTTTATCCTC 100 47
HF553_RS23830 4951523 .. 4951542 + -11.4   -5.1417   ACGCGCAACGGAAAA            CCAGCGGC CTCT GTCGCTGG             TTTTTGCTTTTCTGA 100 50
        glmU 4953254 .. 4953268 +  -5.6  -2.83271   GGATAAAATAATCCT               CCGCTC CAT GAGCAG               TACTTATAAAAATAA  50 91
        glmS 4955327 .. 4955358 +  -9.6  -4.79352   TGTAAACTGAAATCA      GTCCAGTTATGCTGT GAA AAAGCATA-CTGGAC      TTTTGTTATGGCTAA  91 146
HF553_RS23845 NONE
HF553_RS23850 NONE
HF553_RS23855 NONE
HF553_RS23860 4961476 .. 4961492 +  -3.7  -2.84229   TATGGGGAAGAGTGA              GTGGTTA GGC TAGCTAC              ATTTAATGACAATGT  46 26
HF553_RS23865 4963216 .. 4963230 +  -2.1  -3.14284   CCGGCTTCCAGTTGC              GGATCG GCAT CG-TCC               ATTTCTTGGTCGCCG  44 149
HF553_RS23905 4968022 .. 4968044 +  -4.8  -3.64703   ACCCTTCTGCTTATC           GACAAGCGGC GTG GATGTTTGTC           TTTCCCTCCAGCACG  57 126
HF553_RS23910 4968583 .. 4968599 +  -5.1   -3.2241   AGCCCAAAAGTCAGA              GCTTAGG TGT TCTAGGC              GTTTTCTAAGCGCTG  52 246
HF553_RS23925 NONE
HF553_RS23930 4973539 .. 4973565 + -12.2  -5.67283   CATCTCCCCCTGCAG         GCTGGTCTGGTG TCT CCCCGGGCCAGC         TTTTTTATTTCCATT 100 43
        pstS 4974832 .. 4974842 +  -3.2  -3.72695   CGGCAGGGGCAACGT                 CGTA AAA TGCG                 TTTAATGGAAAGAGT  53 130
        pstC NONE
        pstA 4976724 .. 4976749 +  -2.5  -3.10175   TTAAAGACATTGTAG         GCCTGATAAACG TAG CGCC-ATCAGGC         ATTATTTTACGGCGT  43 37
        pstB NONE
        phoU 4978373 .. 4978399 +  -8.7  -2.84878   GTACAGATGCTGTAG        GCCGGATAAGCG TCAG CGCC-ATCCGGC         ATTTCAGTTAACGCG  65 86
        adeP 4980588 .. 4980610 +   -17  -4.58283   CACTGATGAAATGAA           CCCTCGCCCC ATC GGGGTGAGGG           TTTTTAACGAACTTA 100 35
        rpmH 4988181 .. 4988194 -  -2.3  -3.58343   TTTATTACTTGGAAA               CGGTC AGAC GAGCG                CGGCCTTTAGCACGA  49 1
        rnpA NONE
        yidD NONE
        yidC 4985814 .. 4985831 - -12.7   -5.7946   GTTGCAATAAAAAAA             GGCGGTC ATAT GACCGCC              TTTTGATTGTAGGCC 100 118
        mnmE 4984228 .. 4984270 -  -6.4  -4.53163   CTACACAGTAGAAAA CGT-TTCATAGCGGCCTCAC GAAAA GTGTGGC-GCTAAGAATACG GGGCGACGTTGCGCG  76 173
HF553_RS23985 NONE
        yidZ NONE
HF553_RS23975 NONE
HF553_RS23970 4980588 .. 4980610 - -14.8  -3.57418   CACTGATGAAATGAA           CCCTCGCCCC ATC GGGGTGAGGG           TTTTTAACGAACTTA 100 38
        yieH 4977935 .. 4977968 -  -3.8  -3.85817   ACCGCGCTGGAGAAA     TTCTC-CCAGCAGCA CCAGC CGCTGCTGGTGAGTC     TGGAATCGCTGGGCC  56 464
HF553_RS23920 4969303 .. 4969320 -  -6.9  -4.82901   GTCCGCCCACAAAAA             GGCTGTC GATA GACGGCC              TTTTTTTGTGCGCCG  80 134
HF553_RS23915 4968080 .. 4968094 -  -7.1  -3.32268   CAACCACCCGTATAA               CGGCA AATTA TGCCG               CCATCATCTGCATGA  58 481
HF553_RS23900 4966520 .. 4966554 - -11.4  -3.60805   ACAGCGGATCGCAAA     CCTGGCGCGGCTTTTG GTA CAAAAGGCGTGACAGG     TTTGCGAATCCGTTG  87 51
        sat2 4965925 .. 4965948 - -10.2   -3.3482   TAACTCCTGAATTAA          GCCG-CGCCGC GAA GCGGTGTCGGC          TTGAATGAATTGTTA  76 38
       aadA1 4965072 .. 4965095 -   -16  -3.06133   TAACGCTTGAGTTAA          GCCG-CGCCGC GAA GCGGCGTCGGC          TTGAACGAATTGTTA 100 45
HF553_RS23885 NONE
HF553_RS23880 4964033 .. 4964059 -  -7.3   -2.9961   GTAAAGAAGATCAGA        CTC-GTAGCCAC ATCG GTGGCAACTGAG         CTTGTACGCAATGCC  60 76
HF553_RS23875 4963153 .. 4963174 -  -6.5  -3.64703   TGCCGGTCAGTTAAA           GGTGGCCAT TTAA ACGGTCACC            AAATTCGATCATAAA  62 174
        asnA 4937495 .. 4937516 -  -5.7  -2.76263   GGGAGGATTTAACGA           GCAGTGCGC AAAA GCGTTCTGC            CTGGCGTTGATGCGC  50 450
         kup 4932691 .. 4932710 - -10.8   -3.0873   GAAATCAGGTGAAGA            TAATCGCC CGAT GGCGATTA             TCTTGTGGGAATCTA  76 94
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB 4928633 .. 4928656 -  -9.5  -2.75844   GGTTCCACGTCAAAG          TGCGCCACC GGTTAG GGTGGCGCG           TGCCCTGCTTTTCTT  69 113
        rbsK NONE
        rbsR 4926447 .. 4926460 -  -4.5   -3.4252   TCTGACGGACGATAA               TGCCA GCAG CGGCA                ACAGCGTTCTGGCGG  51 245
HF553_RS23700 4922515 .. 4922528 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGAACGTTTCTT  40 36
HF553_RS23695 4922317 .. 4922352 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA     CTGATGGCAACGCCT  79 61
HF553_RS23690 NONE
         rrf 4918954 .. 4918969 -  -3.3  -2.82742   ATTCTTTTACAACCA              CTGAT TTTTAC ATCAG               TTTACTGCTTAATTT  43 44
HF553_RS23680 4918842 .. 4918861 -  -2.8  -2.79684   CTACCAATTGAACTA            CGCC-CC TAATTAG GGTGGCG            GAACGGACGGGACTC  41 21
HF553_RS23675 4918746 .. 4918765 - -10.8  -5.81412   TTTAGGCAAAAAAAA            TCCTTAGC AGAT GCTAAGGA             TTATTTCTGGCAGGG 100 33
        maoP 4917360 .. 4917372 -  -6.9  -5.40072   GCTGGCGTAAAAAAA                GGGCA TTA CGCCC                TTTTTATTAATCATC  91 32
        ilvL 4915336 .. 4915359 - -13.8  -5.78622   TCAGGCCAAAAAAAA          CCCCCGGACC TTTC GGTGCGGGGG           TCTTAGTTCGTTAAG 100 50
HF553_RS23650 NONE
        ilvM NONE
        ilvE 4912363 .. 4912377 -  -2.2  -2.78679   TCCTGTGACGCAAAT               TATCTT GGG AAAATA               TTAATTTTATTTATT  40 39
        ilvD 4910362 .. 4910386 -  -3.7  -2.91264   GGCGCGACTGACAGA         GGTTGA-GAT TCCGCC ATCATCAACC          TCCCAGTTTCGATTT  46 20
        ilvA 4908799 .. 4908821 -  -7.7  -2.64616   CGTCTATGCAGATGA           CCGGAAGGA GACAT TTCTTCCGG           TCATCACTATTCCTA  59 38
HF553_RS23625 4907656 .. 4907666 -  -5.4   -5.0133   CATGCTCCCAAAAAA                 CAGT AAG ACTG                 CGCGTATCCTTAAGG  82 386
        ilvC 4904612 .. 4904639 -  -9.9  -5.28942   TATCGCAAATAAAAA       GCCGGGT--GGCG GCTA CGCCTTACCCGGC        CTACATCGTCAACTT 100 86
         rep 4901491 .. 4901505 -  -2.7  -4.30576   GCTTCATCAGCAAAA               CGCGG TACCG CCCCG               TGTTGCGGAACAGCT  62 285
        trxA 4898327 .. 4898377 - -10.6  -2.74563   CTGATACCTTAATCA TTCGTCGAATGACAGACGC-CTG ACCATA CAGCGCCTTTGTCATTCGACGTA TAAAAGGTATTACGC  74 35
HF553_RS23570 NONE
         rho 4896664 .. 4896695 - -14.6  -4.20696   GGATGAATCGCAAAA      CAAAAACGCCACGT AAAA ACGTGGCGTTTTCA       GGTAAAGACCAGGTT 100 39
        wecA NONE
        wzzE 4894283 .. 4894306 - -12.5  -3.06696   TTCTCTTCGAATAGA          CAGTAGGGG CCCAGC CCCCTACTG           CAGAGGTGTTGCTAA  83 37
        wecB NONE
        wecC NONE
        rffG NONE
HF553_RS23535 NONE
        rffC NONE
        rffA NONE
        wzxE NONE
HF553_RS23515 NONE
        wzyE NONE
        rffM 4884238 .. 4884252 -  -4.3   -3.5556   CAAATGGCAAATGAA               GCATT AAAAA AATGC               ACTTATTGTGTAAGA  54 112
HF553_RS23500 NONE
HF553_RS23495 NONE
HF553_RS23490 NONE
HF553_RS23485 NONE
HF553_RS23480 4882188 .. 4882203 - -11.8   -5.8901   ACAGAAAACAAAAAA              CCCCGC CGAA GCGGGG               TTCAAAATTGGTCGG 100 34
HF553_RS23475 4880995 .. 4881015 - -12.5  -3.76888   GATGCATAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCTGATGCGCCT 100 106
        cyaA 4873938 .. 4873950 -  -2.7  -3.96892   AATCCTCAGGAGAAA                TACTG CTG CAATA                GCGGCGCGTCATGAT  54 3
HF553_RS23425 4872182 .. 4872192 -  -2.4  -2.56715   ATCCTCAGTAATTGA                 CCTG GGA CGGG                 CCATCTCCCGTTGCG  39 4
        dapF NONE
HF553_RS23415 NONE
        xerC NONE
        yigB 4868890 .. 4868901 -  -7.2   -5.1166   CATGAAAACTAAAAA                CGCC CGGT GGCG                 CTTCGCTTACCGGGG  86 115
        uvrD 4866334 .. 4866347 -  -4.5  -4.42765   CGGGAAAAAATGAAA               GGTCG CTGA CAACC                GCTAAGGCTATCAGC  66 371
        corA 4864839 .. 4864849 -  -2.6   -5.1615   TCAATATGGAAAAAA                 TAAT ATG ATTA                 GGATTATTAAAGATA  78 447
HF553_RS23385 4864337 .. 4864369 - -12.2  -4.04927   GTAAGCATTAAATAA      TAAAATGGCAGCTA TTATC TGGCTGCCATTTTA      TGTTATTTCTTCTTA  93 28
        pldA 4861844 .. 4861865 - -12.3  -4.63479   CACCATAAATCAAAA           CAGGCGCTA TTTT CAGCGCCTG            CGAGAGAAACTGCAA 100 60
        recQ NONE
        rhtC 4858914 .. 4858924 -  -2.4  -2.50816   TGGGTATCCAGCAAT                 GGCG CGC CGCA                 GGCGCTATCGATCTG  38 404
        pldB 4857525 .. 4857535 -  -4.6  -3.91798   TAACCTCTAAGCAAA                 GCGA TTT CCGC                 TGGATAAATTAGGCT  59 6
        yigL 4856668 .. 4856684 -  -6.6  -3.12999   GTAGCGGAGAGTGAA              GTTGAC AACTG GTCAAC              TAACAAACAATCACA  58 41
HF553_RS23340 4855408 .. 4855418 -  -3.2  -4.25104   CGCTGGCCAGCAAAA                 CGCA GAT TACG                 CCGGAAGATTTAGCC  62 327
        metE 4852315 .. 4852343 - -12.5  -2.90688   TAATCAGGTCAGACA       CGGGCGCTACCC GTCAAA GGGTAGCGCC-G        CATTGCTGCCGGAGA  82 61
HF553_RS23325 4850628 .. 4850639 -  -2.2  -3.60316   ACGGTGGGAAAAAAG                GCTA ACCA CAGC                 GCATTACGATGTTTG  49 98
         udp 4848764 .. 4848780 -  -9.4   -5.2853   CACGCAAAAAGAAAA              GGCCGA ACGCG TCGGCC              TTTGCAAAAGAGAGG 100 45
        rmuC 4847180 .. 4847197 -  -2.6  -3.11727   AAGAAGTGTAACAGA             TTGGGC CAATTT GCCCTA              CTCTGCGCCAGGACT  43 58
        ubiE NONE
        ubiJ NONE
        ubiB 4844034 .. 4844044 -  -2.4   -2.8937   ACATACTTTTACATA                 CGAC CGG GACG                 ACATTGACTTGCGGC  41 108
        tatA NONE
        tatB NONE
        tatC 4842307 .. 4842328 - -15.9  -2.62184   CTTGCCCCCATATGA           CAACCGCCC TGGC GGGCGGTTG            TGTTTAGTCTTCAGT 100 29
        tatD 4841124 .. 4841144 -  -3.2  -5.02074   TCACCCTGGAAAAAA            TGGTACGC GGAAA ACGTACCT            CCGTCAGCGAACCGC  76 389
        ubiD 4839293 .. 4839334 -  -2.4  -3.01712   GGTGTCGGGTCAATA CCGACATTTTTCAAGCCGAG TCGC CGCAGCCTGAAA--TGTCGA TGTCCGCTTTCAGTT  42 39
         fre 4838534 .. 4838551 - -12.7  -4.74504   AGGCTAACGTAAAAA             GGGACGC TACT GCGTCCC              ATAAAATAGTTAAAT 100 35
HF553_RS23255 4836344 .. 4836377 - -21.1  -3.09933   CGGCAACTGAGCGAA     TCCCCGGGCACATAG ATAA CTATGTGCCCGGGGT      GAGCAAAGGCAGCCA 100 132
        pepQ NONE
HF553_RS23235 NONE
        trkH NONE
        hemG 4828697 .. 4828715 -  -3.2  -2.52623   TCTGCCTGACAAGAG             GAAATTTA AAA TAATTTTC             TGAGTGCGCACTTTT  42 53
HF553_RS23220 4826792 .. 4826805 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGAACAGTTCTT  40 36
HF553_RS23215 4826631 .. 4826644 -  -5.3  -2.71745   CGTGGAATAACGAAG               CATAC ATCA GTATG                TGAGTTATTTCACAA  49 61
HF553_RS23210 4826434 .. 4826467 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTCGTAAAC  69 51
HF553_RS23205 4823317 .. 4823328 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 91
         rrf 4823144 .. 4823193 - -26.9   -2.7035   CTCACCGACAGACCA CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCTTTTGTTTTATTTG ATGCCTGGCAGTTCC 100 28
HF553_RS23195 4821213 .. 4821223 -  -3.2  -4.62069   GCGGCACGGGAAAAA                 CAAC ACT GCTG                 AAAAAACTGATCCCG  67 500
HF553_RS23180 4820261 .. 4820271 -  -8.2  -3.62597   TTTACTCTTTAATAA                 CGCC GCG GGCG                 CGTAAAAGCGCCGTT  69 1
HF553_RS23175 NONE
        dsbA 4818519 .. 4818537 -   -16  -4.87273   AACATCTTATAAAAA             CGCCGGTC AGT GACCGGCG             TTCTTTTTATTTTTT 100 32
        polA 4814198 .. 4814224 - -18.1  -5.45652   ACGCCCAATAAAAAA         CGCCCCAGTCA TAAAC TGACTGGGGCG         GCTAAAATATTCAGC 100 250
HF553_RS23150 4812959 .. 4813012 - -19.9  -3.99405   GGAATCTAGCAGAAA GCAAGCAAAGAAAAAAGGCGACAGA GTAA TCTGCCGCCTTTTTTCTTGACTCAC GACCCTTAACGGGTT 100 31
        yihI 4812333 .. 4812351 -  -6.1   -3.3636   CCACACCAGATAACA             TATAACC GGAAG GGTTATA             AGCAGGACGGGCAAG  59 58
        hemN 4810543 .. 4810566 -  -7.5  -2.68544   AAGATTAATAATTGA          GCGCAAAAC GCTGCT ATTTTGCGC           TTTACTGTTCCGATG  57 281
        typA 4804110 .. 4804136 -  -8.7  -5.80364   ACGTGAATAAAAAAA         CCCCGCCGA GTTTTCATT TCGGCAGGG         TTTTTATCCGTAAGA 100 48
HF553_RS23040 NONE
HF553_RS23035 4786718 .. 4786744 -  -6.6   -4.3821   AAAAGACAATAGAAA         CGCAGACGAT GCCCAAT ATCGCCTGCA         TCACAGCGCCGTTTT  74 89
        yihX NONE
HF553_RS23025 NONE
         dtd NONE
        fabY 4783527 .. 4783538 -  -7.2  -4.39828   AACACCTGGAGAAAA                CGCC CCCT GGCG                 TTTCAGTATTGCGAA  79 219
HF553_RS22995 NONE
HF553_RS22990 4780628 .. 4780644 -    -5  -3.93695   GTCAGCAGCGATAAA              GCCCCG TTTAT CTGGGC              CGCGCTCTCCCTTTA  63 508
        fdhD 4774341 .. 4774355 - -12.8  -3.35597   GCGACTGTCGAAAGA               GCGCCC CAG GGGCGC               TTTTTTCGTTCGAAG  90 205
HF553_RS22955 4771868 .. 4771882 -  -8.5  -5.31059   ACATGAACGAAAAAA               GCGCC TGATC GGCGC               TTTTTATTGGCGTTA  95 96
HF553_RS22940 4769952 .. 4769966 -  -8.5  -3.28712   TTGTCGGCCGGATAA               GGCGG TTACG CCGCC               ATCCGGCAATTTCAA  69 37
        rhaS 4763409 .. 4763420 -  -7.2  -3.06796   CCGTAGGCCAGGTAA                GGCG CAAC CGCC                 ATCCGGTATTAAAGG  60 89
        rhaR 4762051 .. 4762061 -  -2.4  -3.19656   AAACCGATGCATGAA                 GCTG CTG CCGC                 GCTTGGCGTTGACCC  43 446
HF553_RS22895 4760093 .. 4760115 - -14.2  -5.82316   ACCAGGTAAAAAAAA           CCGGCTACCT ATA AAGTAGCCGG           AAAAGGGAATAAATA 100 58
        sodA 4756184 .. 4756201 - -11.3  -5.71712   GCGGATACAAAAAAA             GCGAGTC ATCA GACTCGC              TTCTACAGACGTGCA 100 48
        yiiM NONE
HF553_RS22865 4755012 .. 4755037 - -13.3  -3.44381   AGCGAACCTAAAAAC         CATCGGCCTGC GAAT GCAGGCCGATT          TTTTATCTCGCCGTC 100 46
        cpxP 4752230 .. 4752248 - -14.6  -6.02914   TGGAGATAAAAAAAA             CCCCCACA TCA TGTGGGGG             AAGACAGGGATGGTG 100 65
        fieF 4751132 .. 4751146 -  -2.9  -3.39432   AAACGATCCAACGAA               TATAC AGATA GTATA               ACAATCCCTTCCTGC  46 117
        pfkA NONE
HF553_RS22835 4748861 .. 4748885 - -15.1  -5.63517   GTGGCAAAGAAAAAA          CCCGGTAACAT AAT ACGTTACCGGG          TTTATAAACGGTTTA 100 38
HF553_RS22830 4747911 .. 4747952 - -17.7  -3.37053   AGAGAGTGTAACTAA CCATCAAAAGATATAAAGG TATA CCTTTATATCTTTTGATCG  GTTTCACATATTTTT 100 115
HF553_RS22825 NONE
HF553_RS22820 NONE
HF553_RS22815 NONE
HF553_RS22810 4743534 .. 4743549 -  -3.2   -2.9175   GATAGGGCAACCAGA              GCGACA TACC TGTCTC               CTGACGATTTTTTCA  44 114
HF553_RS22805 4742100 .. 4742113 -  -8.1  -3.57144   GCGGTGATCGTGAAA               GCAGC AGAA GCTGC                TAAAAAAGCGTAATT  69 148
HF553_RS22790 4739967 .. 4739993 -  -6.5  -3.83409   CGACAGATGACTAAA         CATCTGCGCCG CCGAC CGGGGCATATG         ACGGCTGAACATTAC  64 153
        zapB 4734824 .. 4734839 - -11.8   -5.1675   CGAGTGATCAAAAAA              GGCGCC GTAA GGCGCC               TTTTTTATGCGTTGT 100 223
        rpmE 4726342 .. 4726371 - -12.3  -4.38712   GTTATCCCTAGAAAA       CAAAAAAAGCGCC CTGC GGCGCTTTTTTTT        CTGGCGGTAACTTAT 100 37
        metB NONE
HF553_RS22700 4719014 .. 4719027 -  -5.2  -3.08464   TGATGAGGGAGCGAA               GCGC AACCCG GCGC                TTCGCTCACGAACTT  51 48
HF553_RS22680 4713880 .. 4713907 - -14.2  -3.52113   ATTTCGGCAGAAACA        TGCCGGGC-ACGC GGC GCGTAACCCGGCA        AAATTACAGGCGCTG 100 143
HF553_RS22675 NONE
         alr 4711324 .. 4711360 - -14.5  -2.60496   GGCCGGGTTAAACAT   CGCCGGGATGCGCCAG TTCTGG CTGACGCACCCCG-CG    CCCACGGGCTGGCTG  87 84
        metF 4708802 .. 4708817 - -10.4   -4.1711   ATGAGGTGTAATAAA              GCTCCC GGCA GGGAGC               TGGAGGTTATAAACC  85 32
        katG 4706432 .. 4706463 - -15.2  -4.17491   ATTAAACGCGGAAAA      CGTCAGCGACTACC GAAT AGCAGCCGCTGACG       AATTAACCTGTCAGA 100 41
HF553_RS22620 4696141 .. 4696153 -  -2.7  -4.94902   GAAGTAGTAGAAAAA                CTGTT GGG AACAA                AAACCGACGTGGTGA  74 273
        argC NONE
        argB 4693278 .. 4693289 -  -7.2  -3.30243   ACGTAGGCCCGATAA                GGCG CAGC CGCC                 ATCAGGCGAACAAAT  63 43
        argH 4691753 .. 4691780 -  -8.2  -5.00616   TTTTTGCGTAAAAAA        GCCCGGCGTCGC TGAT GCTCGGCCGGGC         AGTATTACCTGATAG  87 58
        oxyR 4690522 .. 4690539 -  -5.5  -3.98214   ATCATGGAGCAGAAA             GGTGGTG GTAA CACCATC              GAATACTTCGTTAAC  63 98
        fabR NONE
HF553_RS22580 4687977 .. 4688014 -  -9.1  -3.16336   ACCGCAAGGTAAAAT   GTACGTCGGATGGCCGGT TAT ACCG-CCATCCGGCCTTC   GCACACTACTCTGCG  70 31
        btuB NONE
        murI 4683624 .. 4683651 -  -2.5  -2.85069   AATTGTTAAAGAGCA        GTGCCGCTTCG CTTTTT CTCAGCGGCGC         GGGGTGTGCATATTA  42 233
HF553_RS22560 4681904 .. 4681917 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGAACAGTTCTT  40 36
HF553_RS22555 4681743 .. 4681756 -  -5.3  -2.71745   CGTGGAATAACGAAG               CATAC ATCA GTATG                TGAGTTATTTCACAA  49 61
HF553_RS22550 4681546 .. 4681579 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTCGTAAAC  69 51
HF553_RS22545 NONE
         rrf 4678069 .. 4678118 - -22.5  -2.62616   CCATCCGGCAGACTA CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTATTTG ATGCCTGGCAGTTCC 100 28
        murB NONE
        birA 4675918 .. 4675954 - -12.6  -3.91984   AGATTGCGGAAATAA   CAG-AAAAAAGGGGAGT ACCG ACTCCCCTTTTTTACTA    TTCGGCGCTTCGCAG 100 23
HF553_RS22515 NONE
HF553_RS22510 4674321 .. 4674341 -  -2.5  -3.05816   TCATTCTGCACTGAA            TATCGAGAG AAA CTCTCTTTA            TTCGAGCCGGTAAGC  43 81
HF553_RS22505 4674189 .. 4674199 -  -3.2  -2.56596   CGCTCTACCAACTGA                 GCTA TAT CAGC                 ACATCTTGGAGCGGG  42 32
HF553_RS22500 4674057 .. 4674073 -  -4.3   -3.3071   ATATCACCACATCAA              CCAGGCA ACA CGCCCGA              CTTGTTGAATGCTAA  52 76
         tuf 4672772 .. 4672789 - -11.3  -4.60924   GAAAGCGTGCAAAAA             GGGCATC AAAT GATGCCC              TTTTATTGCGCATTG 100 60
        secE NONE
        nusG 4671596 .. 4671624 - -17.6  -5.35224   CCCATAAAAACAAAA        GGCGCGAAATTG TATGT CAATTTCGCGCC        CTATGCAACGATTAG 100 65
        rplK NONE
        rplA 4670321 .. 4670357 -  -6.6  -2.80513   ATATTTCAACAGAAT   CGTGGG-GGTAAGATTG TAGA CAAAATCACCGCCCACG    TAAAGACTAATCTTA  55 38
        rplJ 4669447 .. 4669460 -  -8.1  -3.89695   GCTTGATAAAGACAA               CTGCG ATTA CGCAG                CTTCTTTTGCATCGC  72 18
        rplL 4668956 .. 4668981 - -17.7  -4.64766   CTTACAGCGCAAAAA         GGCTGGTGACT AAAA AGTCACCAGCC          ATCAGCCTGATTTCT 100 65
        rpoB 4664627 .. 4664656 - -13.6   -3.4252   TCGGAGTTAGCACAA       TCTGGTGTCGGG TTTTAC CCCGACACCAGT        GACCTGTTTGAGCGA 100 44
        rpoC 4660338 .. 4660367 -   -10  -2.53164   GTATCCAGCATGAAG       CTGGTGGAGGGA TAAATG CCCCTCCACCAT        TTAACGATTACTCGT  70 33
HF553_RS22450 4659620 .. 4659644 -  -2.3   -3.6796   AATAGACTTTAATAA          CTTAGATTTAT GGG ATAAATTTAAA          GTCACATTTGGACTC  49 388
HF553_RS22440 4658963 .. 4658986 -  -8.8  -4.67234   ACGTAATGCGAAAAA          CGGGAGATTG TTAT CGACCTCCCG           TTTTTTTATTTTGTC  89 31
        nudC NONE
        hemE NONE
         nfi NONE
HF553_RS22385 NONE
        hupA NONE
HF553_RS22375 4647940 .. 4647950 -  -8.2  -2.65993   ACTATACGCAGACCA                 GCGC GCT GCGC                 CAGCAACTGATATCC  56 322
        zraS NONE
        zraR 4644449 .. 4644459 -  -2.4   -4.4648   AGCTGGATGAGAAAA                 CCTC CGA GTGG                 GACGAACGCGCTTCA  62 334
HF553_RS22345 4639676 .. 4639689 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGAACGTTTCTT  40 36
HF553_RS22340 4639478 .. 4639513 -  -9.2  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATA     CTGATGGCAACGCCT  79 61
HF553_RS22335 4636220 .. 4636232 -  -3.3  -3.05816   TTATTGCGTACTCAA                CTCTG AAT CTGAG                CTGAAAATCGTCTCT  45 56
         rrf 4635911 .. 4635960 - -22.5   -2.7035   CTCACCGACAGACCA CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTATTTG ATGCCTGGCAGTTCC 100 28
        metA 4634046 .. 4634061 - -10.4  -5.63517   TTCGGAAATAAAAAA              GGCACC CGAA GGTGCC               TGATTCAACATGCTG 100 71
        aceB NONE
        aceA NONE
        aceK 4628534 .. 4628550 -  -6.5  -3.17527   TATTTATGACGAACA              CCGCGAA CCG TTTGCGG              CCCTCTCTATTTCCG  56 523
        metH 4623799 .. 4623821 - -14.2   -3.4214   ATTGTAAGAAAGAGA           CAAGGCACCC AAT GAGTGCCTTG           TATGTTGTAAGGAAA 100 58
HF553_RS22285 4621908 .. 4621959 - -20.4  -3.12351   CCTGGCCACATTGAA TGCCGAATGGCG-GGCCTACG CGCATGTTCTC CGTAGGCCCCGCCATCCGGCA TTTCACTTAATACTC 100 32
HF553_RS22275 4621033 .. 4621048 -  -3.2  -2.78463   ATTTTGCGGATTATA              CCTGTA ATTT TTCAGG               CGATACCAGATGGCA  43 5
HF553_RS22270 NONE
        rluF 4619051 .. 4619067 -  -2.9   -5.1861   GCGATGAGCAAAAAA              TCAGTGA TTC TCGCCGA              CCATACCAAATTTGG  79 496
         pgi 4611227 .. 4611244 -    -7    -5.626   TATCTTATAAAAAAA             GCCGAT GTGAAT ATCGGC              CTTTTTATTATCTTA 100 125
HF553_RS22225 4610618 .. 4610639 - -11.7  -4.13014   TCCAGAGGGGCAAAA           TAACCACAC CGGA GTGTGGTTA            TGGTTAAACGTACCG  93 44
HF553_RS22220 NONE
HF553_RS22215 NONE
HF553_RS22210 4607026 .. 4607040 -  -2.1  -3.28924   GAGGTTTCTGTATAA              CG-CAC AAAT GTGACG               GGCATCTATATTTTT  45 114
        psiE 4606425 .. 4606444 -  -5.6  -2.75183   AGTTTTATCGAAGTA            CCTGCCCG GCAA CGGGCAAT             GCCACTGCCCTCAAC  50 157
        malK NONE
HF553_RS22180 4599622 .. 4599633 -  -7.2  -2.57581   CCAACCCAAACATAT                CGCC GAAT GGCG                 GCTGGCGCCTTATTC  57 113
        malM 4598587 .. 4598606 - -11.4  -6.04378   AAATGATAAAAAAAA            GGTGCGCC AGGA GACGCACC             AGTTGCTGCAAAATC 100 59
        ubiC NONE
        ubiA 4596991 .. 4597017 -  -7.4  -3.54543   AGCCAGTGCCTGAAA        TGCCCGAT-AG TGCAAG CTCATCGGGCA         ACTGATATGACGTAT  65 83
HF553_RS22155 4593960 .. 4593975 -    -4  -2.84839   TATATACAGTTAAAG              GTGATT TTGG AACCAC               AAACGGCGCAAAAAA  46 67
        lexA 4593239 .. 4593260 -  -5.1  -3.30124   CCGTAGGCCTGATAA           GCGCAGCGCC ATC AG-GCTGCAC           GATTGCCGGATGACG  54 65
        dinF NONE
HF553_RS22140 NONE
HF553_RS22135 4591370 .. 4591397 -  -3.4  -4.74103   GCCTGAACGGAAAAA        CGGGCG-GC AGTAGAGAGGG GCACGCCCG        CATTCATAAGCAAAC  69 83
HF553_RS22125 4589252 .. 4589272 - -18.3  -3.70068   TAGCATAACGCTAAA            CCGGAGGCG TAG CGCCTCCGG            TGAAAGCACCTCAGA 100 36
        dusA 4588143 .. 4588166 -  -4.5  -5.07523   GATATATAAAGAAAA          CGCCCTGCA AGACTG CACAGAGCG           TGGTGAGATTGACTA  77 56
        pspG 4587631 .. 4587651 - -12.6  -2.54371   CTCTGCAAAGAAATT            GGGCTTCC ACCCG GGAAGCCC            TTTCTTTTTTTGTTC  81 161
        dnaB NONE
         alr 4584000 .. 4584026 -  -8.7  -3.48924   CCATGCGCGATACAA        GCCGGATAAGCG CAAG CGCC-ACCCGGC         CCGCCGCGCATTTAA  71 37
        tyrB 4582612 .. 4582662 -  -9.6  -3.29541   AGGATGATCACAACA GCTATTGTCAGGCCGGAGGGCACT GTT ATCGCCGTCCGGCCTGAATATTAC ATGACAGCGGCAAAT  74 22
        aphA 4581734 .. 4581752 - -10.3  -5.13521   AAATCATGCAAAAAA             GGAGAGC CTGTC GCTCTCC             TGATTTTTAGTACTC  93 32
HF553_RS22085 NONE
HF553_RS22080 4580392 .. 4580413 -  -4.5  -3.48276   GCGCGGGTTATACAA           CGTAAGCAA CCAC TTACTTACA            TCCAGGCTGAGAGAT  52 467
        ssb1 4576259 .. 4576278 - -12.2  -4.69053   TACCAGGTAAGAAAA            TGCCTGGT TTAC ACCAGGCA             TTTCAGCAGACGAGA 100 86
HF553_RS22055 NONE
HF553_RS22050 NONE
HF553_RS22045 NONE
HF553_RS22040 NONE
HF553_RS22035 4553958 .. 4553981 - -12.4  -4.00868   TTATCCATAAGTAAA          CCCCCTCACC CAAA GGTGAGGGGC           CTCCGTTATTATGCG 100 34
HF553_RS22030 4551804 .. 4551844 - -13.6  -3.55444   TGCCGACTTGTTAAA  TGACAAAAAAGACCCGTT TGTGC AACGGGTCTTTTTTATTA  AGCAGTACCACCTGA 100 65
HF553_RS22020 4549001 .. 4549016 -  -6.1  -2.87769   ACGCATCAAACATTA              GGCGA GTATAT TCGCC               AGCGCCGTCTCCTGT  51 171
        soxR 4548245 .. 4548270 - -13.4   -4.4572   AAGACCGGAAACAAA         CTAAAGCGCC CTTAGC GGCGCTTTAG          TTTTAGGTGAACTCA 100 61
HF553_RS22005 4547242 .. 4547252 -  -3.2  -4.17958   AATATGCTCAATAAA                 TCGC CAG ACGA                 TGCGCAAACGTTATC  60 118
        ghxP 4545602 .. 4545634 - -13.6  -4.07885   GATGTGTCCTGAAAA     TG-AAAACGGGCGAC CAAC GCCGCCCGTTTTTCA      GAATGAAGGCAGAAC 100 40
HF553_RS21995 4543853 .. 4543873 -  -8.4  -2.82742   ACCGGGCCACAAGGA            CTACTGAT TTTCT ATCAGTAG            CGCTTCCATCAAATC  64 5
HF553_RS21985 NONE
HF553_RS21980 4541637 .. 4541679 -  -5.7  -3.14132   GGGCGTGCGCATTAA TCTTACCGTTTCCTCCGGCCC TGT GGGTCGGAGGAAA-A-TCAGA ACATCACCCTCGCCA  54 21
        nrfA NONE
        nrfB NONE
        nrfC NONE
        nrfD NONE
HF553_RS21940 NONE
        nrfF NONE
        nrfG 4530344 .. 4530364 -  -5.5   -3.6502   TATTTGTTATGGAAA            GTTTTTTAC TTC GTCAAAAAC            GAATAATACACTGAG  59 118
        gltP 4528715 .. 4528756 - -12.5  -4.25104   TCCGTGGGATGAAAA TTATGTAGCTACCG-CTTGA CGT TCAAGACGGTAGCTACATTC TCTTTCTCTGTAGGC 100 71
        proP 4519421 .. 4519435 -  -2.9  -2.87344   TATGCCCGCGAGAGA               TTAAG CGAAC CTTAA               GCGCGAAATTTATTC  42 35
        pmrR 4519241 .. 4519256 -    -9  -3.96483   ACCGTATGGAAAGAA              CAGGCA CCCG TGCCTG               GGTGCTGTTGAAAAA  79 55
        melA 4508133 .. 4508153 -  -6.1  -3.64599   TTAGTAGAGGTTAAA            CGCCGGA TCTGCCG TCCAGCG            CGGCTGGAGATTAAC  62 36
        melB 4506553 .. 4506566 -  -3.7  -3.91488   AACTGCGCGAAATAA               CCTGG CAGG CCCGG                CGTTCTCCCGGGCCG  57 109
HF553_RS21805 NONE
        dmsB 4496971 .. 4496981 -  -3.2  -2.53382   ACCAGCGGTAACTCA                 TGCA TGG CGCA                 CCTCCCGAATGTTCA  42 12
HF553_RS21795 4496202 .. 4496213 -  -2.2  -5.01732   AAGCCGGGCAAAAAA                CTAC ATTG GCAG                 CGTCCACAGATTGTA  69 14
HF553_RS21790 4495457 .. 4495485 - -12.5  -3.92592   AGCTGTAATAGTAAA       CTGTGCCCGCTG ACGCAA CAGCGGGCAC-G        ATGGCGGCACAAGTA 100 73
HF553_RS21780 4492652 .. 4492671 - -10.7  -6.48081   TTTATAAAAAAAAAA            GCGGCAG ACTACG CTGCCGC             AAATATGAGGAGGAC 100 194
HF553_RS21745 4487928 .. 4487946 -  -3.1  -5.42862   ACAGGCTCAAAAAAA             GAGACCA GATTT CAGTCTC             TTTTTTATCACTCAT  81 53
HF553_RS21645 4473525 .. 4473542 -  -6.3  -4.56597   TTTCTGTCCTAAAAA             CAGAGCA GATT TACTCTG              GAGTTATTTTCCTGT  76 414
HF553_RS21635 4470775 .. 4470791 -  -9.4  -3.20109   CAGAAAACGAGCTAA              GGGCGT CAACC ACGCCC              TTACTGTGACATATA  72 70
HF553_RS21630 4468615 .. 4468628 -  -5.3   -4.1196   AATCCATGTTTAAAA               CAATC TTTC GATTG                CCTTTCGTTATATCT  63 302
HF553_RS21625 4466742 .. 4466761 -  -6.4  -3.42407   CACATCATTAATCAA            GGCGGTAA GTTT TTACCGAC             GGAGTGTTTCCAGGA  60 63
HF553_RS21620 4465982 .. 4465997 -  -2.4  -3.31144   GCCGTATTCTCAGAA              CGGTCC TGCA GATCCG               GGATAGCCGGGATTA  45 4
HF553_RS21615 NONE
HF553_RS21610 NONE
HF553_RS21605 4464479 .. 4464493 -   -10   -4.0616   CAGTTGAACGATAAA               CAGAGC CCT GCTCTG               CTGAAAAAACACCGT  80 412
        dndB NONE
        dndC NONE
        dndD NONE
        dndE 4458776 .. 4458819 -  -8.4  -2.89848   TAAAATTGACTAAAT TTTGTTCAGGCCATCCATATT GTT AATTTGGATGGCCTAAA-AAT TCTTAATCTATTGAT  65 28
HF553_RS21540 4447579 .. 4447601 - -13.5  -3.76232   CTGTGAAACAGATAA           CCCTGCAGT AATAG ACTGCAGGG           TATTTCTGTTTAATT 100 103
HF553_RS21535 4445818 .. 4445836 -  -3.1  -2.89534   ATGAACGATACGATA             CCTCAAT GGTTT ATTGCGG             TGATAACCTGAAGGG  42 195
        fxsA 4433784 .. 4433825 -  -8.8  -2.77861   CGAAGCGAAAACGCA TGGCGTAAGACGC-ATCCG CTGGC CGGATAACGCCTCACGCGA CTTATCCGACCAACA  64 50
HF553_RS21480 NONE
        groL 4430119 .. 4430154 - -18.4  -4.37971   AAAAGATGACTAAAA    GAAAAACCCCCGGTCA TTTC TGCCCGGGGGTTTCTC     AATTCTGGGAGATAA 100 162
HF553_RS21470 4429650 .. 4429680 -   -17  -2.79809   GAAAAACGCTAACCA       TATCGCCCTCTGAA TCT TTCAGAGGGCGTTA       CGATTCAGACATATC 100 39
         efp 4426831 .. 4426852 - -12.3  -3.01831   GCGCGAAAAATAGGA           TGGCGCAGC ATAC GCTGCACCA            TTTTTCCCGATAACG  83 45
HF553_RS21450 NONE
        ecnB 4426384 .. 4426421 -  -8.6  -4.36914   TGCTTCCGGAGAAAA   TCGATTAACGGTACGAC GCCAT GCCGTACCGTTGAT-GA   TTACTGCTGAGCTCT  84 26
        sugE 4425137 .. 4425148 -  -5.8  -4.93877   TCTGAGGAAATAAAA                CAGC AAAT GCTG                 GCCGTCGCGACCCGG  83 108
        epmA 4419929 .. 4419945 -  -9.4  -4.43221   AAATATGCTACAAAA              TGGCGC TTATT GCGCCA              TTTTATCTCGCGATA  86 56
        yjeM 4418219 .. 4418240 -  -2.1  -2.91395   ATCCTTTTCATAAAG           CCGATGAGC TAAC GCTATCCGG            ACAAAGATTACTCCG  41 33
HF553_RS21395 4417790 .. 4417805 -    -6  -4.09685   CGTCAGCGGGTAAAA              CCAGCC GCCC GGCGGG               CAGTTTGTAAACGCA  68 102
         orn 4411345 .. 4411366 -  -4.4  -3.96624   TATTTGCAGGATAAA           CAACAAGC TATCAC GCCTGTCG            CCTATGACAGCTATC  60 365
HF553_RS21365 NONE
HF553_RS21360 NONE
HF553_RS21355 4409642 .. 4409657 -  -4.6  -3.14132   TGCGCCGTGGAGTAA              TGCCGT TATT ACGGCG               CTGGAAAGCCGCAAG  50 457
         nnr NONE
        tsaE NONE
        amiB NONE
        mutL NONE
        miaA NONE
         hfq 4402110 .. 4402144 -  -7.2   -3.6279   AAACCCTCTTAATAA    CCA-G-CGGGGGCG ATTATCCGA CGCCCCCGACATGG    ATAAACAGCGCGTGA  67 43
        hflX NONE
        hflK NONE
        hflC 4398268 .. 4398303 - -14.2  -4.37092   ATCGCCCTTATAAAA    GAAAACCACCGGCATCC TTT GGATG-CGGTGGTTTTG    CTGGTCTAAAACCGC 100 51
HF553_RS21300 NONE
        purA 4396500 .. 4396512 -  -5.5  -2.98447   GTATTGATGATAAAC                CAGCC ACA AGCTG                TGTCGCTAATTTATT  51 165
        nsrR NONE
         rnr 4393516 .. 4393536 - -11.2  -2.64877   CCTACAGATAATTCA            CCCTCTTC TGTTT GAAGAGGG            TATTGCTCACTCTGC  77 32
        rlmB 4392667 .. 4392704 - -13.8  -3.42663   ATTACCAGCCAAAGA   TAAAAAAAAACCATCC GATTAT GGATGGTTTTTTCTTA    AAAAATACTATTAGC 100 42
HF553_RS21275 NONE
HF553_RS21270 4391379 .. 4391389 -  -6.8  -4.33417   GCTACCGATAACAAA                 GCAG ATA CTGC                 CCGATAAACAGGCCC  74 108
HF553_RS21265 NONE
HF553_RS21260 NONE
HF553_RS21255 NONE
HF553_RS21250 NONE
HF553_RS21245 4386454 .. 4386468 -  -6.4    -3.737   TAATGTTGCAGGAAA               CCCACA GGA TGTGGA               GCGGATTATCGCCCT  60 185
        yjfP 4384858 .. 4384878 -  -3.9  -4.60487   GATTACCGGCAAAAA            TGCCAATCC GCA GGTTTTGCA            ACAGCTTGAAGCCCA  69 62
        ulaA 4381228 .. 4381242 -  -2.8  -4.48987   CGGTCATAATCAAAA               CTCCTT ATT AAGCAG               ACTGTTCTGCCAGTT  63 18
        ulaB NONE
        ulaC NONE
        ulaD NONE
        ulaE NONE
HF553_RS21190 4377978 .. 4377988 -  -6.8  -3.29324   GCCACGGAAAGTGAA                 GCCA ATC TGGC                 GCTGAATGAAGAGGC  56 263
HF553_RS21180 NONE
        rpsF NONE
        priB NONE
        rpsR 4376390 .. 4376400 -  -2.4  -2.50307   CAAAGTCGTATTAAT                 GGAC CGT GACC                 GATTACTGATGGCGA  39 28
        rplI 4375856 .. 4375886 - -11.9  -5.09895   GATGGAGTTAAAAAA       GCAAAACGCCGGC GCTGG GCCGACGTTTTGT       TGCTAGCAAAAACGA 100 51
HF553_RS21155 4374485 .. 4374498 -  -5.9  -3.32865   GGAAGAACAAAACCA               GCCGC AGAC GCAGC                CTTTCCAGCAGGATA  56 365
HF553_RS21145 4373076 .. 4373102 -  -8.1  -2.78384   CTTTGGTCTATGATA        CGACGA-TCCTG TTAT CAGGACTCATCG         ATATTAGGTAAGAAT  60 236
        cycA 4371498 .. 4371525 -   -12  -2.87146   TGGCCGGAGAATAAT        CGCCAGCCGGGCA TTT TGCC-GGATGGCG        GCTGTAAACGGCGCC  80 108
HF553_RS21120 4368137 .. 4368153 -  -5.8  -3.78934   GGCGGCGGATAATAA              CTGGCG TCTGG CGCCAA              TCCACAGCGATACGG  63 235
        cysQ 4364885 .. 4364901 -  -7.9  -3.67498   TAACCTTGAAGATAA              CCAACGG GTG CCGCCGG              TAGGCATTGCCGATC  65 479
HF553_RS21100 4364214 .. 4364234 - -16.9  -3.50335   TGCCAGAAACATCAA            CGGCTCCTG ATT CAGGAGCCG            TTTTTTTTTACTTTT 100 66
        tamA 4360090 .. 4360100 -  -4.6  -2.62316   TAAACTCATAATTCA                 GGCC CCA GACC                 GATATAAAACTGTAA  46 5
        tamB NONE
HF553_RS21075 4355928 .. 4355950 -  -9.9   -5.1925   CCAGAATGTAAAAAA          CAACGCCACC CGAG GGTGGCG-TG           TTCAGTTCAGGGCTG 100 32
         mpl 4349781 .. 4349802 - -15.9  -4.52857   ATGCCCCATATAAAA           CAGCCAGCC ACAA GGCTGGCTG            ACCGCATAGTCATTT 100 39
        iolR 4348455 .. 4348483 - -15.4  -2.64595   AAGTTTCACCACAAT        GCCGATGATCGC TAAAT ACGATCATCGGC        TTGTTTTTTTACTCC  93 34
       iolT2 4345069 .. 4345096 - -17.2  -2.71263   AAGGTTGTGTAACCA        GCGGAGAATATC TCTG GATATTCTCCGC         TAATATTGGAGAGGT 100 42
        reiD 4341107 .. 4341126 -   -10  -5.72622   CTGACAAATAAAAAA            TGGCCGCA GTAT TGCGACCA             TTCTCATGACGATTA 100 55
        iolE NONE
       iolG1 NONE
        srfJ NONE
       iolI1 4336312 .. 4336345 -  -3.7  -2.71712   TTTTCTGCGCCAAAT     TTCCCGACCGTTACG GCGG CGCCACGGTCGCAAC      CTTTTCACTACTGGT  43 353
        iolD 4331024 .. 4331051 -    -2  -5.10163   AACCGCAAAAGAAAA        GCATCCGTAATTC TGC GAAAAACGGAT-C        GTTTTATTTTGCCGT  71 129
       iolG2 4329903 .. 4329928 -  -8.3  -4.52589   CCTCGGTATAGAAAA         GCTCTCACACT TTTC AGTGCGAGAGT          TTCTTCATTATTAAT  87 49
HF553_RS20970 4328568 .. 4328596 -  -7.6  -5.03314   CGTAGGGTGAAAAAA       CCGGC-TTTATCA ATCT TGATAAAAACCGG        TTTAATTTAGTGATG  86 82
       iolI2 4327671 .. 4327699 -    -9  -2.91695   GTCACCTGGAAATTA       GCTGTATCATTGC AGCA GCAATGACAC-GC        TGCGATTAATTTGTT  67 3
        iolH 4326695 .. 4326722 - -12.1  -3.55622   GGTAATTGCCGTAAA        TG-ACCGCGCCA GCCTG TGGCGCGGTACA        GGCAAATCCACCCTT  88 43
        pmbA 4324636 .. 4324672 - -11.6  -3.65201   TAATACCCTGAATAA   TTCGGGTTGCAGGCAGC CAAC GC-GCCTGCAGCCTGAA    GTATGACGGGTATTA  87 38
        cybC 4324149 .. 4324198 - -10.9  -2.79183   GTGATGGGTATTACA TTTTGCCGGATGGCGACCT-GC GGATAAA GCGAAGCCGCCATCCCACAAAA ATTAACGATACTTCT  74 27
HF553_RS20940 NONE
HF553_RS20935 NONE
HF553_RS20930 4322899 .. 4322912 -  -3.1  -5.06414   CCTTTTTAATAAAAA               TCAGCG TTT CGC-GA               CGAAATCCACCCTGT  74 12
HF553_RS20925 NONE
HF553_RS20920 NONE
HF553_RS20915 NONE
HF553_RS20910 NONE
HF553_RS20905 NONE
HF553_RS20900 NONE
HF553_RS20895 NONE
HF553_RS20890 4315379 .. 4315396 -  -6.9  -2.52676   GACCTGGGTAAGTGA             GAGCGGC CAAC GCCGCTA              CAGCGCCAAATGCAA  54 518
        mgtL 4308186 .. 4308215 - -12.1  -2.87564   TCACTGTCTTACACA       CCGGTAAGACAGC AGAG GCAGGCTTACCGG        AAAAGGAAAATTCTC  80 19
        mgtA 4305181 .. 4305196 -  -3.9   -3.4252   CTTCACCGAGCACAA              CGCCA CCTTCC CGGCG               CGTTCCTGCGTGGAA  49 189
HF553_RS20800 4296178 .. 4296188 -  -4.6  -4.41633   CATGGCGAAAAAGAA                 CGGC GGC GCCA                 TCACCCTGACCGAAG  68 467
        rraB 4294930 .. 4294951 - -10.9  -5.43866   TAACCTGTAAAAAAA           TACGACAGC AGAC GCTGCCGTA            CCGTCATACTATGCA 100 44
        miaE 4294041 .. 4294052 -    -3   -3.4619   ACTCAGAACAGAATA                TCAT GAAA ATGA                 CCTTTCCTGCTCGCC  48 120
HF553_RS20770 4291020 .. 4291037 -  -5.5   -3.9712   CCAGCCGATGACAAA             GGCC-CGG TTT CCGTGACC             AAAATCATCGACGGC  63 422
        lptF NONE
        lptG 4283701 .. 4283737 -  -6.6  -2.90496   TGGCGGCGGAAAGGA    CTTATCCGGCCTAC GGGTCCGGA GTAGGCCTGAAAAG    CACAGCGCCATCAGG  56 57
        idnK 4278184 .. 4278201 -  -5.5  -4.14392   CCGGAAGCGTTAAAA             GCACTGG CGGG CCAGTTC              GATCTCATTATTAAC  65 377
HF553_RS20710 4277169 .. 4277184 -    -9  -6.02919   TTAGAAATAAAAAAA              GACCTC AGTT GAGGTC               CATTTACATGCTTTT 100 40
HF553_RS20705 4275669 .. 4275711 - -20.1  -5.48303   ACAACGGTAAAAAAA TACAACGACCAACCAGCCC GATAA GGGCTGGTTGGTCATTTTA ATTTAAACATCAACC 100 61
HF553_RS20665 NONE
HF553_RS20660 4258615 .. 4258626 -  -7.2  -3.73359   AATAATTTAATAGAA                GGGC TTAT GCCC                 ACAAGTCGAACACTT  68 496
HF553_RS20655 4258221 .. 4258248 -    -2   -2.6518   CTCAATATGTATAAC        GCCTCAATAACCG GCT CAGCT-TTGATGC        ATCCGGTGCCGCAGG  39 78
HF553_RS20650 4256700 .. 4256710 -  -5.4   -3.1372   CACTCCCGAGCAACA                 GCAA CTT TTGC                 ATGAACACATCTGCC  54 508
HF553_RS20640 4253626 .. 4253642 -  -5.1  -2.68823   GTTGTCGTACATAAC              TACTCCT CAA AGGGGTA              TAAGGGAGCGACCGT  48 8
HF553_RS20635 NONE
HF553_RS20630 NONE
HF553_RS20625 4246741 .. 4246764 -  -9.7  -2.83641   GAATCCATGAGCACA          TAGTTGCGA TGATGC TCGCAACTA           TATGTACATTCAAGA  69 480
HF553_RS20620 4245366 .. 4245408 - -15.3  -2.74514   GCAAACCTCTAATTA TAAATTAAACAAATCTGTC TCTAT GGCAGATTTGTTTAATTTA TAAAGCTGTTATAAA  93 458
HF553_RS20600 4240773 .. 4240792 -  -2.8  -5.31275   CCGCAGCAGAAAAAA            TTACGCTA TGAA TAGCGCCA             CATTACTCTAATTCA  76 329
HF553_RS20595 4239742 .. 4239772 -  -8.3  -5.55664   TCATCACTAAAAAAA       CAGACGGCAGAAC AAAAA ATTCCGACGTCTG       AACAAATTTAAATAA 100 85
HF553_RS20590 4239001 .. 4239014 -  -3.7  -4.15006   ACAGGCACTGGAAAA               GCGCC CCCG GGTGC                AGTGTAAAATGTACG  60 171
        uxuR 4237330 .. 4237350 -  -8.9   -4.4773   CTACAGGAAGTAAAA            CGTGGACTG GGT CTGCCCACG            CTATTCCAGGTATAA  88 41
HF553_RS20570 4234900 .. 4234921 -  -3.1  -3.92522   CGTCAAGGTCAGAAA           CACACTATCA ACT TGAT-GTGTA           TATAAAAAATGCCGT  55 208
HF553_RS20565 4234087 .. 4234125 -  -2.3  -3.38522   CAGGTAGCCGAAACA   TTTTGGCGCGACCTG CGTGGGCTT CAGGCCGCGCTGTAA   ACACATCAGGCGGTA  45 31
HF553_RS20525 4224429 .. 4224449 -  -6.7  -3.07104   CGATAATTATAGAGA            GCGTTGCCC GGC GGGCACCGG            GCCTGCAACATTCAG  58 53
HF553_RS20520 4222790 .. 4222802 -  -4.8  -4.26344   ATATCGGGATCAAAA                GCAC GGTTA GTGC                AACGTGGATAAATAA  66 149
HF553_RS20510 4222228 .. 4222239 -  -5.8  -3.60296   GAGGTTCAGTTTAAA                GAGC TTAA GCTC                 TATGACGCCTTCCAC  57 342
         tsr 4214001 .. 4214048 -  -4.9  -3.95836   AGGGTTAAAAGAGAA TGTCATATATGCCGGGT--GGCG GCTG CGCCTTACCCGGCCTACACATCA TCTTTATCCATAAAC  61 140
HF553_RS20440 NONE
        bglJ 4205889 .. 4205901 -  -6.9  -3.53012   CTGGTGGTCGCGAAA                GGCGA TGC CCGCC                TGGATAATAAGAAGC  60 339
HF553_RS20415 4202672 .. 4202685 -  -3.9  -3.37522   ATCCCATGCAATTAA               CTATT GACG AATAG                CTGAAAACCACTAGA  50 434
HF553_RS20390 NONE
        rimI NONE
        yjjG 4199909 .. 4199919 -  -6.8   -2.8805   ATCAGTGTTTACACA                 GGAG CTG CTCC                 AGTTCGCTTAATGAC  56 1
        prfC 4198184 .. 4198203 - -16.4  -3.33483   CAGGGAAAGTACGAA            GGCGCGGC GGAT GCCGCGCC             CGGAAAGGGATCAGT 100 36
        osmY 4197156 .. 4197182 - -14.5  -2.62184   GTGTGGTGCACATTA        CG-CCTCCCGAC AAAC GTCGGGAGGACG         AATTACGACTAATTA  87 38
HF553_RS20365 4196856 .. 4196874 - -14.6  -4.28049   GCTAAAACCGTAAAA             GCCAGTCC GCT GGACTGGC             TTGATAGCAATATAT 100 56
HF553_RS20360 NONE
HF553_RS20355 4194807 .. 4194818 -  -5.8  -3.75629   TATGGCGAAGCGAAA                GCCT GGCC AGGC                 GCGACGCCGCAAGAG  61 145
        deoC 4191475 .. 4191493 -  -3.9  -2.73124   CGCCATCCGGCAAAT            CAG-AGCT TAGT AGCTGCTG             GCGCTCTTACCGTCG  45 13
        deoA 4190016 .. 4190026 -    -4  -3.23855   TGCTTCAAAAATAAT                 TGAT CAG ATCA                 GTATACAACTATTCA  48 34
        deoB NONE
        deoD 4187428 .. 4187441 -  -4.5  -4.10791   AACACGGATAAAGAA               CGCCA AACT TAGCG                GCCTGTCCTTGTGCA  61 415
        serB NONE
        radA 4181973 .. 4182000 -  -9.2  -2.55909   AAAATCGCATAACAC        TGCCTGAT-AGCG CTT CGCTTATCAGGCC        TACAACATCAATCCG  66 106
        nadR 4180592 .. 4180636 -  -5.6  -4.42806   GTATTGCCAAATAAA CGTCTGAATGCCGGGT-GGCG CTTG CGCTTACCCGGCCTACAAACC CAGCGATTCCAATAC  70 97
        sltY NONE
        trpR 4176217 .. 4176236 -  -2.1  -4.08767   TTTACCGCCGGAAAA            TTAACGC GCTCCA GCGTTTA             CCACCAGGCGGTAAT  56 182
        gpmB 4174799 .. 4174809 -    -4  -3.23692   GACGATGAGCAGGAA                 GTAT TCT ATAC                 CACCGCACTGCCGCA  47 296
        creA NONE
        creB NONE
        creC NONE
        creD 4169874 .. 4169894 -  -5.3  -4.46212   CGCGCTACTATAAAA            CCGCCGCCA CGG TAACGGCCG            GGCAAGCGAATGCCA  70 127
HF553_RS20200 4161318 .. 4161330 -  -3.4  -3.73968   AAATTTGTGATGAAA                GCTA GCATT TAGC                TACGATGATTTCATC  53 122
HF553_RS20195 NONE
        thrL 4160015 .. 4160037 -   -12  -5.75342   CTGGTCGAAAAAAAA           GCCCGCAC TGTTCAG GTGCGGGC           TTTTTTCTGTGTTTC 100 41
        thrA NONE
        thrB NONE
        thrC 4154901 .. 4154913 -  -9.1  -3.38326   GATAAGCTCAACGAA                GCGCT TGA AGCGC                AGGGCGATCGGGTGG  66 409
         tal 4151707 .. 4151717 -  -5.4  -2.68487   TTAATGATTACAGCA                 GATC GCC GATC                 ATTTTTTCCAGTTTT  50 7
         mog 4150638 .. 4150661 -  -4.4  -3.06515   GCTGATGCCGAAAAT          GGGTCTGACG GATG CGCCTGACGC           TCAGCTACTCGGCGC  47 362
        dnaK 4146752 .. 4146778 -   -18   -2.9518   CTTAACATGCATACA         CGGGCGGAGAGG AAA CCTCTTCGCCCG         TGCCAGTAATTACCC 100 54
        dnaJ 4145536 .. 4145555 - -11.4  -5.29782   TACAGGCAGAAAAAA            GCCCGGAT ATAC ACCCGGGC             TGAAGAAAAATACAA 100 52
HF553_RS20125 4144243 .. 4144255 -  -4.9   -3.6106   TTTAACACTCCGAAA                TCATT ATA AATGA                ATAATTAACACAAGG  57 124
HF553_RS20120 4143849 .. 4143864 -    -9  -4.16146   AAAAGACGCGTAAAA              GGCTCA CGGA TGAGCC               TGATACTGCAAATGA  82 44
HF553_RS20105 4140297 .. 4140314 - -14.1  -4.36914   CCCTGGTGGAGAAAA             GCCCCGG TAAA CCGGGGC              TTGAATCATGAAGCC 100 66
HF553_RS20100 4137199 .. 4137228 - -11.6  -4.25104   GGGGGCGCAGGAAAA       GAGATTCGAAAG AACGCG CCTTCGAATCTC        AAACTAATAGTCCAG  93 64
HF553_RS20095 4136288 .. 4136298 -  -4.6  -3.15078   TATAGTGCATTAATA                 CGCC ACT GGCA                 GTTTTCCGAGCGCCG  50 9
HF553_RS20090 4135298 .. 4135316 -  -5.3  -5.69473   CAGACGAGAAAAAAA             TCCCGAT AAGGA ATCAGGA             ATAAACCATGCTAAA 100 20
        bcfB NONE
        bcfC NONE
HF553_RS20075 NONE
HF553_RS20070 NONE
HF553_RS20065 NONE
HF553_RS20060 4129080 .. 4129099 - -11.4  -3.58533   CGATAAGTTCGGAAA            GCCTCCCG CTAT CGGGAGAC             GCCTGAAAAAAAGTT  87 39
HF553_RS20055 NONE
HF553_RS20050 4127387 .. 4127401 -  -5.8  -4.21773   CGTTAAGAGAAATAA               TATCAT TAC ATGATA               AAAAAGTGCTAAAGG  67 502
HF553_RS20030 4123229 .. 4123259 - -14.8  -3.49938   GCAAATAAGCCATAA       TGTTATGCGGTCGA TAA CCGGCCGCATAACA       TACTTAGTTATGCAA 100 33
HF553_RS20015 4118623 .. 4118658 - -11.2  -4.86731   TTCCCTGAAATAAAA    GAACCTGATCCGG-CAC AGA GTGACCGGATCAGGTGG    GCATAGCCCTAAGTG 100 69
HF553_RS20010 4117388 .. 4117406 -  -3.9  -3.81948   TAATGTGAGAAAACA             TATTCAC TCCCT GCGAATA             CTACCTTCAAACAAA  55 32
HF553_RS20005 4116022 .. 4116078 -  -8.2  -2.98447   GTATTCATGATAAAT CTCCAGTGTATTAAT-CTCATCGCCCC TCAT GGGACCACGAAAATTAATACTCTGGAT TTTTATGCCGACCGA  61 79
HF553_RS20000 4114247 .. 4114264 -  -9.1  -3.56704   TTTTTACGAAATGAA             GTCCGAC TTAC GCCGGAC              CTTTTTAGTGCAGTC  73 60
        nhaA 4112937 .. 4112948 -  -5.8  -2.53213   CAATGTCGCAAGGGA                GCGA TACA TCGC                 TCCCCCTTTCCTTCG  49 47
        nhaR 4111960 .. 4111990 - -18.4  -2.83747   GAATTTGTAGAATGA       TTCCGGCTGCGG GTTAGTA CCGCAGCCGGAA       GTATTACGGTAGGTA 100 44
HF553_RS19970 NONE
        ribF NONE
        ileS NONE
        lspA 4103029 .. 4103072 -  -3.9  -4.64157   CAAAGAACGATAAAA CCGTAG-GCCGGATAA-GGTG TTTT CACCGCCATCCGACACCACGT TTGCCTGATGGCGCT  69 90
        fkpB NONE
        ispH 4101415 .. 4101433 -    -6  -5.33848   ATTACAACCAAAAAA             CCAGCA ACGATTG TGCTGG             TTTTTCAGATGAATA  91 172
HF553_RS19940 NONE
        rihC 4099151 .. 4099182 -  -7.2  -4.40963   AGGCGTGAAAAATAA      CTTTCTCGAAGCGG AGAT CAGCTACGGGAAAG       TGGGCAGGCCGGAGA  79 85
        citC NONE
        citD NONE
        citE 4089474 .. 4089484 -  -4.6  -3.20227   CCTTAATCACGAATA                 CCGG AAG CCGA                 CAGCGCCACCACTTT  50 2
        citF NONE
        citX NONE
        citG 4086441 .. 4086464 - -12.6  -3.45743   TATCAGTAAAAGACA          TGATTCATCC CGCA GGATGAATCA           TTGCTGGAGAGAATG  93 54
        dapB 4085419 .. 4085437 - -11.8  -5.55855   GGCAAAAAAACAAAA             GGGCAATA ATA TATTGCCC             TTTGTAATCAATTAA 100 80
        carA NONE
        carB 4079985 .. 4080004 - -10.8  -6.10295   GCAAGATAAAAAAAA            GGGTTTCT TTAC AGAAACCC             TTTCAACATTATATT 100 79
        caiF 4079259 .. 4079284 -  -9.7  -4.64676   GCAGGTCGAAGAAAA         CCGACCGCGCCT GAA AGGCACGA-CGG         ACGTGAAGCCAAAAT  91 129
HF553_RS19815 NONE
HF553_RS19810 NONE
HF553_RS19805 NONE
        fixX 4068202 .. 4068260 - -14.4  -2.57931   TGTAGGCCGGATAAG GCGTTTCCGCCGCCATCCGGCATTGGCG CCA CATGATTGCCGGATGGCGACGCTACCGC ATCTTATCCGGCCAA  87 63
HF553_RS19795 NONE
HF553_RS19790 NONE
HF553_RS19785 4065601 .. 4065615 -  -2.7  -3.38535   TGAAATAATAAGAGA               GCGCC AGCAA GGTGC               CATGTTACGTCACAA  46 186
HF553_RS19775 4062311 .. 4062349 - -10.2  -3.97413   CCGACGAATAAAATA   GCCTAATGGGTCAAACAC TTA GAGCCTGGCCCAGTAGGC   GTAATTGTTGAAGCC  82 152
        kefF NONE
        kefC 4059345 .. 4059361 -  -2.3  -2.80195   ACTGATCATTAATTA              TTTCCTG ATA CAAAAAA              AATTGCCGCCACTAT  40 201
        folA 4058816 .. 4058854 - -13.3  -3.02263   ACATCTGGCTCAAGA  GTAG-GCCGGATAA-GGCG TTT CGCCGCCATCCGGCACTAC  AGCGTTAACGACGTT  86 30
        djlA 4050584 .. 4050595 -  -7.2  -3.73072   AAGTGTGTTATGAAA                CCGG CAAA CCGG                 CGCAAACGGAATATA  65 377
HF553_RS19700 4043428 .. 4043442 -  -2.2  -4.35926   ACCCGAAAGTCAAAA               TAAAAT TAT ATTCTA               AAATAAAAATTAAAT  59 165
HF553_RS19695 4042715 .. 4042726 -  -3.6  -4.40561   GCCTTTGAAAAACAA                GGCA TTGA CGCC                 GCTCAAATGCCCGGC  66 247
        araC 4037603 .. 4037615 -  -4.8  -3.15544   CGTCAGCGTGATGAA                GCAG GGATT CTGC                TTACCCCGTCCCCCT  52 108
HF553_RS19670 4036369 .. 4036383 -  -4.3  -4.25848   AATCCGGGATTAAAA               CTGAA CGCGC TTCAG               CGGGAGAAAATGCAC  66 454
        sgrT 4031378 .. 4031400 - -16.4  -5.95539   GCCGAAATAAAAAAA           GCCAGCAGAT ATT ATCTGCTGGC           GGGTGATTTTAGGCT 100 87
HF553_RS19640 4030816 .. 4030855 - -15.2  -4.34402   GCGTTGATACCAAAA  CGACCAGCAATAAGCGAT ACTC ATCGCTTATTGCTGGTAT   CTATCTTATTTTAAT 100 31
        leuO 4024308 .. 4024344 - -16.2  -4.65838   GATATACGCTAAAAA    GCAGAATAAACCAGAA TTTGT TTCTGATTTATTCTGC    CCGGTTTTATCGCTT 100 32
        ilvI NONE
        ilvN 4021662 .. 4021687 -  -7.6  -5.75945   ATTTCGCAAAAAAAA         GCCCAACC GGTGATATTG GGTTGGGC          GATAATTCCTGTTGG 100 149
         cra 4020141 .. 4020158 -  -3.4  -4.07885   CACCGCCGTTTAAAA             CGGACT CAATAT AATCCG              AGAAAAATATAAAGT  57 390
        mraZ NONE
        rsmH NONE
        ftsL NONE
        ftsI NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG 4008843 .. 4008860 -  -3.3  -3.01422   CACCGCCACAAATTA             TGTCCGGG CAA CCCGG-CT             GACTTCACTGGCGAC  45 5
        murC NONE
HF553_RS19535 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ 4002959 .. 4002980 -  -6.7  -3.09208   AAATTACCTATCCAA           CCGAAGTGTA CTA TACA-TTCGG           CGGGCCAGTTTAGCA  58 75
        lpxC 4001944 .. 4001987 - -10.3  -5.90981   GGATAGTAAAAAAAA CGACTGGCTCGCCTGGC CGGAGAGAGT GCCAGGTTAACCAGTCG AATTTTATACGACAG 100 50
        secM 4001190 .. 4001206 - -11.5  -2.79175   AATAAAGTCTCAAAT              GCCCCGC GCC GCGGAGC              TACAAATAAAGTAAA  77 55
        secA 3998338 .. 3998355 - -12.7  -5.28176   TGCATCCATAAAAAA             GGCGCAG TCAC CTGCGCC              TTTTTATCTGTGTTC 100 139
        mutT 3997895 .. 3997925 -  -8.3    -3.409   AAATCGCTAATAAGA       TCGATGGGGATCG TGTTG CGATCCCCACTAA       GGCGCAAATTGGCGT  69 22
HF553_RS19470 3994746 .. 3994769 - -14.6  -3.32963   AGCGGGATGGGATAA          GGCTGGCGCA CATT TACGCCAGCC           AGAATATTAGAGGCT 100 32
        ampD NONE
        ampE 3989081 .. 3989104 -  -9.6   -3.4252   TTGTAGGCAGCATAA          GCGTTAGCGCC ATC GGCAC-AACGC          TACACTAATGCCCCA  75 25
        pdhR 3983651 .. 3983663 -  -7.7  -2.55818   AACAACCGGAACGTA                CACGT AGT ACGTG                AGGATTGTGAGCACT  59 154
        aceE NONE
        aceF 3978890 .. 3978907 - -14.1  -5.88471   GATTATCAAAAAAAA             GCCGGCC GTCG GGCCGGC              TTTTTCGCTTACATC 100 34
        lpdA 3977236 .. 3977251 - -10.4  -5.64274   CCATGCATAAAAAAA              GCGGCT GTAA AGCCGC               TTTTTTGTATCGGGT 100 64
HF553_RS19400 3976380 .. 3976399 -  -4.9  -4.67234   AGCGAAGGCCAAAAA            GATGGCC TGTACT GGCCAAC             CAAAGCAGGCGACGT  71 343
        acnB 3971166 .. 3971185 - -11.4  -5.54338   GAATGAAAATAAAAA            CCCACCGC AGTT GCGATGGG             TTTTGTAGGCCCGGT 100 104
HF553_RS19380 3970615 .. 3970631 - -13.7  -5.24129   TTCTGCTATAAAAAA              GCCGGGA TAC TCCCGGC              TGGAATGTTTGGCGA 100 107
HF553_RS19375 NONE
HF553_RS19370 NONE
HF553_RS19365 NONE
HF553_RS19360 3965993 .. 3966011 -  -6.6  -3.53012   GCCCGCTGCCGGAAA             CCGTGGTG GCG CACCTCGA             TAAGAGCCATATCTG  60 521
        cueO 3962466 .. 3962485 -   -15  -3.35358   CGAAATAACCATTAA            TGCCCGGC GTAC GCCGGGCA             TTGTGCCGGGTAGCG 100 76
         hpt 3959015 .. 3959027 -  -5.5  -4.56597   CGCTGTTGGGAAAAA                TGCCC GAA GAGCA                ACGTCTGGATGCGCT  73 324
HF553_RS19320 3957565 .. 3957578 -  -3.1    -3.794   GGGCAACCCAGTAAA               GCTGCA TCA TGC-GC               GATCTCCTTGTTTTT  53 18
HF553_RS19315 3956769 .. 3956797 -   -14  -3.06073   GACAGCCGTCAAAAG        TCTCCTCTTCCC TCCAG GAGAAGAGGAGA        ATCGTATCAGCTACG  87 32
HF553_RS19310 3956221 .. 3956245 -  -2.7  -5.05782   ACCGAGGCGAAAAAA          CGCCGTTATTG TAG CAAAAGCGTCG          TCAATGGTATTGATC  73 39
HF553_RS19305 3954899 .. 3954915 -  -2.1  -4.10453   CAAAGCTGGTCAAAA              CAGGGAC GGA GGCCGTG              ACACCCGGTATTTTC  56 78
        hrpB 3937943 .. 3937965 -  -4.2  -3.28368   AGGCAACGTATAACA          CGTCACGAA TACTTC TTCGTG-CG           CCGCGTTGGGGCCGT  50 5
        mrcB 3935257 .. 3935270 -  -5.9  -2.90392   GACCGGGTAAGCACA               GCGCC ACCC GGCAC                TATTACCGTGATTAA  51 37
        fhuA 3932771 .. 3932792 - -13.7   -4.1466   AGCCAACTTGTAAAA           CGGGCACGG CAAG CCGTGCCCA            AAAGAAATTAGAAAC 100 33
        fhuC NONE
        fhuD NONE
        fhuB 3928637 .. 3928653 - -12.3   -3.7829   ACGAGATGCATTAAA              GATGCGG CAT CCGCATC              TTAATATTTAAAAAG 100 383
        stfA 3927474 .. 3927502 - -16.1  -2.73364   TTTTTACTTTAAGCA        TTATCCTGCGGCA GAC TGCCGCAGGATGA        TATTTTACTTACAGA 100 34
HF553_RS19185 NONE
        stfD NONE
HF553_RS19175 3923481 .. 3923492 -  -2.2  -2.53263   TTCATTGGTAATCCA                CCAC CAGC GTAG                 CACCTGCGTTAAACG  39 0
        stfF NONE
HF553_RS19165 NONE
HF553_RS19160 3921472 .. 3921496 -  -7.2  -3.82807   AGAAGATATCAATAA         CACCATCGACGC CGC GCGTCG--GGTG         TTTGCGAAACTGTAA  68 148
        clcA NONE
        erpA 3918178 .. 3918189 -  -5.8  -3.30124   CTGTAGGCCGGATAA                GACG CTCG CGTC                 GCCATCCGGCACAAC  56 50
         dgt NONE
        degP 3912766 .. 3912797 - -12.4  -2.58418   GTTTCACAGAAAAGT      GTTG-CCCCCTTCCA TGA TGGAAGGGGGACAAA      GGTGATTACTGCATC  81 31
        cdaR 3911389 .. 3911406 -  -6.3  -3.31263   AGCCGATCTGGACAA             GCTTACC CGTA AGTAAGC              TGTGTGTTGCCGGAT  59 112
HF553_RS19105 3909445 .. 3909463 -  -8.1  -4.21275   TTAAGCGAGTGAAAA            GCGGGGGC GACA GCCCCC-C             TTTGCATTACGGCGA  76 32
        rpsB 3903505 .. 3903525 - -11.1  -4.89729   TATAAAAGTGAAAAA            GGGGGCC ATATACA GGCCCCC            TAACCAAACGTGATA 100 199
         tsf 3902559 .. 3902580 - -13.7  -4.61633   AGAGAGGCGCAAAAA           GAAGCCGCC CTCA GGCGGCTCC            TCAGGAAAATCAGGA 100 35
        pyrH 3901592 .. 3901610 -  -5.3  -4.11751   ACGAATCCTTGAAAA             CTAGTCT CAGTC AGACCAG             ACGGTCACACAATAC  63 135
         frr 3900908 .. 3900957 - -16.5  -5.16151   GAAACGGAATAAAAA GCAAAACGCCGCACAGGAGACCT GATA ATGTCTTCTGCGCGGCGCTTTGT ACACCACTCATCCGC 100 84
        ispC 3899556 .. 3899573 -  -8.4  -5.28176   TGTATCCACAAAAAA             GCCGTG TAAAAC CACGGC              TAACCTGACCGAAAA  95 130
        ispU NONE
        cdsA NONE
        rseP 3896368 .. 3896385 -  -2.7  -3.33696   GTTCTTCCTAACTAA             CTCTC TTACAACC GAGAG              AAATCATTGAAAAGT  46 13
        bamA 3893908 .. 3893921 -  -2.4  -3.24747   TCGCTACACTACCAA               TGCA TTCCTT TGCA                GTGAACAATTACCAG  44 34
         skp NONE
        lpxD 3892230 .. 3892263 - -13.1  -3.57992   AAGGCAATAATAACA     CGGCCTGCCGCAATC GTAT GAATGTGACAGGCCG      GAAAAGAATGGCAAC 100 55
        fabZ 3891733 .. 3891743 -  -4.6  -2.57136   TTATCAATCACGAAT                 CAGG CCT CCCG                 GCTACGAGCACACAT  46 14
        lpxA NONE
        lpxB NONE
        rnhB NONE
        dnaE NONE
        accA 3884677 .. 3884697 - -16.9  -5.75342   CTCGCCCAAAAAAAA            GAGGCCGGA TTA TCCGGCCTC            TTGGGGAAAAATGAG 100 49
HF553_RS19000 3882741 .. 3882767 - -15.2  -3.79849   TAAGCATAGTAACAA         TCCTGCCGATGC AAA GCACCGACAGGA         TTTATCTTATTACAA 100 35
        ldcC NONE
HF553_RS18990 NONE
        tilS 3878378 .. 3878393 - -10.4  -4.18018   GTCGGTCAGGGAAAA              GGCAGC TTAT GCTGCC               GCGAACTTACTGGTG  86 392
HF553_RS18970 NONE
        arfB NONE
        nlpE 3876308 .. 3876328 - -16.9  -3.74077   CGGCAGATATGTAAA            GGCCTCGCA CCC TGCGAGGCC            TTTTATTAGTGAGTG 100 31
        gmhB 3869759 .. 3869773 -  -6.4  -3.12351   CTCTTTCAGAGTCAA               CCCTGA ATT TCAGGA               TTTTTCTCTTCAACC  56 169
HF553_RS18920 3867972 .. 3867985 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGAACAGTTCTT  40 36
HF553_RS18915 3867811 .. 3867824 -  -5.3  -2.71745   CGTGGAATAACGAAG               CATAC ATCA GTATG                TGAGTTATTTCACAA  49 61
HF553_RS18910 3867614 .. 3867647 -  -4.5  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCC TTTC AGGTACACTCTGAAG      TATTTTTTCGTAAAC  69 51
HF553_RS18905 3864497 .. 3864508 -  -4.4  -2.78679   TGCCGCCAGGCAAAT                TCTG TTAT CAGA                 CCGTTTTTACGTTCT  47 91
         rrf 3864256 .. 3864266 -  -5.4  -3.16564   CTGGCAGTTTATGAA                 TCAC TTC GTGA                 TTCACCCTTCGGGCC  54 135
HF553_RS18895 3864076 .. 3864097 - -15.9  -5.31519   ACATGCAAAGAAAAA           GCCCTGAGC TAAT GCTCAGGGC            TCTTAATAAGTGGCG 100 36
        dkgB 3863088 .. 3863105 - -11.3  -3.97043   GCGAATATATAAGAA             CAGCTCC CGCA GGAGCTG              TGAAAGAGGGGTAAA  91 60
HF553_RS18880 3860826 .. 3860839 -  -3.8  -2.75481   CTGTAACGTCAACCA               GTCC TCAACC GGAC                TGGTTCTTCTGTTAT  45 111
HF553_RS18875 3859947 .. 3859971 -  -7.7  -3.62607   TATGAGAAAAATAGA          GGGCAGCACCC GCA GAGGCCTGCCC          CACGGCAGACCTGAC  69 47
HF553_RS18870 3859114 .. 3859134 - -11.1  -4.49644   ACGAAAAAGCCAAAA            GGCGCCG CTTCCCC CGGCGCC            TTTTAAATTGCTATA  93 36
HF553_RS18855 3855935 .. 3855952 -  -3.3  -4.21989   CATAACTGGAAGAAA             CGCGGCT GGAA AACTGCG              GAAAAGAAACCCGTA  58 211
        dnaQ NONE
HF553_RS18840 3854597 .. 3854621 -  -8.6  -5.94597   GAAGACGAAAAAAAA          CCGTATCCCT TTTAC AGTGATACGG          TTTTTTTTACTTCAC 100 73
        tssH NONE
        tssB NONE
        tssC 3842737 .. 3842748 -  -2.2  -3.33583   ATAACAGCCGGACAA                CTGA CTTC CCAG                 GCTACAGCATATTGT  45 279
HF553_RS18785 3842215 .. 3842231 -  -2.2  -3.61517   ATCCTTCTCCAATAA              CTTCAG GAGAA CAGAAG              ACTGTATATTTTTTT  49 164
HF553_RS18780 3841593 .. 3841618 - -17.7  -4.71463   AATCAAAATAATAAA         TCCGGCCAGAT ATAA ATCTGGCCGGA          AAAACAGCCGTTAAA 100 36
        tssJ NONE
        tssK NONE
        tssL NONE
HF553_RS18760 3837472 .. 3837494 -  -4.9   -2.5474   TGGCAGCGATAACAT           TATCACAGG GTATA CCTGTCATA           CTTCAGGCTGCATGT  48 131
HF553_RS18755 NONE
        tssM 3833070 .. 3833080 -  -2.4  -3.40403   GCCGGCGCATTACAA                 CGCC CTC GCCG                 GACAACTGAAGTTCT  45 9
HF553_RS18745 NONE
HF553_RS18740 NONE
HF553_RS18735 3831288 .. 3831306 -    -3  -3.40403   GTTCTGCTACCAGAA             CCAGCC TTGCCCT GGCAGG             TAACGTATGCCCGGT  46 57
HF553_RS18730 NONE
HF553_RS18725 3829909 .. 3829919 -  -6.8  -3.45324   CACCGTCAGGAAACA                 GTGC CCC GCAC                 TTTATAATGCAACCA  62 356
HF553_RS18720 NONE
HF553_RS18715 3826703 .. 3826713 -  -3.2  -3.36492   TCCGGAATTTCAGAA                 CTGA TTT CCAG                 TACCGTCTGTGTGCC  48 506
HF553_RS18705 3822033 .. 3822061 -  -3.9  -3.96068   TTATCGTAATAATAA       CGGTCATGGTCA TACATC TGACC-TGAGCG        CCCGGTCAGGTAACC  57 406
HF553_RS18685 3820416 .. 3820447 - -10.9  -5.03961   AATTAAATAACAAAA      GAGCCGGGAAGAT TTAAAT ATCCTCCCGGCTT       TTTATTATTCCAGAT 100 30
HF553_RS18670 3818107 .. 3818132 -  -7.1  -3.40498   TAAGCCTTAATAATA         CTTAATAG-AAG TTG CTTACTATTAAG         CTTGATATGCCGCTA  63 21
HF553_RS18665 NONE
        papD NONE
HF553_RS18655 NONE
HF553_RS18650 3813375 .. 3813391 - -12.3  -2.66034   ACAAACCTTATACCA              GGGGCTT ATA AAGCCCC              GCTCACAAAAGAGTG  81 291
HF553_RS18645 3811954 .. 3811968 -  -4.2  -4.20516   CGTTCACCTAACAAA               GTATCC CGT GGAAAC               AAGCAAAACATCGCC  62 485
HF553_RS18635 3810571 .. 3810588 - -11.3  -3.65542   GGCATCGTCAAAAGA             CGACTGG CTGA CCAGTCG              CATATCTCGATGCCT  87 101
HF553_RS18630 3810248 .. 3810263 -    -9  -3.85698   TGGTGGCTTCAGAAA              TACCGG CCTC CCGGTA               GACATCTTTAACAAT  77 181
        tcfA NONE
        tcfB 3807176 .. 3807195 -    -8    -3.214   CGGATCAGATGAAGA            GCTAATAA CCGG TTATTAGC             CGGCAGTGACAGCCT  64 21
        tcfC NONE
HF553_RS18600 NONE
HF553_RS18595 3802689 .. 3802701 -  -3.5  -2.93073   GTTCCGTAAGAAGGA                TAATA ATG TATTA                AATCAGTAAGTACAC  44 50
HF553_RS18590 3801650 .. 3801686 - -11.1  -3.11798   GCGTAAAACAAGAAC    CACACTCATATTAATAA TGA TTAGTAATGTGAGTGTG    CGTATAACGAGATAC  76 308
HF553_RS18585 3800916 .. 3800930 -  -2.8  -5.06451   GAGCATTTCAAAAAA               TCACTA TGC TGGTGA               TGAACATACCGCTTA  76 105
        lpcA 3794972 .. 3794997 -  -9.7  -2.57931   GCCATCCGCCACAAT         GCCCGAT-GGCG CTT CGCTTATCGGGC         CTACACGTTCCAGGC  68 68
HF553_RS18555 3793717 .. 3793758 -  -8.1  -3.04415   GACCAGCAAAGCACA GCTCGTAGCTACCGTCTTGA ACG TCAAG-CGGTAGCTACATAA TTTTCATCCCACGGA  62 7
HF553_RS18550 3792436 .. 3792448 -  -6.2  -3.55444   GGGTTAGGCCCGAAA                CGCC GTCAG GGCG                ATTTTAAAAGTCCGG  57 475
        dinB NONE
HF553_RS18535 NONE
HF553_RS18530 3788773 .. 3788795 -   -12  -3.10173   AGAAAGCGCTAAAAT           GCCCGTCC CATTTCT GGACGGGC           TATCAATATGGAATA  81 143
         gpt 3786555 .. 3786579 - -17.1  -4.78572   TTGTAACCAATAAAA          CAGCGCCCGGC ATT GCCGGGCGCTC          TGAAAAGCTGCTGAT 100 40
        frsA 3785267 .. 3785279 -  -2.7  -3.17586   ATCAATCTATTAACA                CAATC TAT GATTA                ATCCAGTCGGTAATT  45 7
         crl 3784459 .. 3784473 -  -9.2  -2.75267   AAACCCGCAACATGA               CGCCAG TTT CCGGCG               GATTTGCCAATAAAA  60 354
        proB 3782324 .. 3782337 -  -3.1  -3.18264   TTCCTTATCGAGTAA               TCATG TCAT CACGA                TGAACAGCGACCGGG  46 1
        proA 3780978 .. 3780991 -  -5.3  -3.30619   AATCACGGGGTAGAA               GGTTA AAAC TAACC                GGGCGGTGCGTCAAT  54 85
HF553_RS18490 3780545 .. 3780557 -  -7.7   -2.9175   GACATTGGAATGACA                GCCAT TTT ATGGC                CTAAAATTTGAAAAC  61 328
HF553_RS18475 3777230 .. 3777287 -  -7.9  -3.61398   CTTTTTTCGTAATAA CTTTCGGTTATAGCAGCTATTTCCGCTA CAA TAGCAACAATAGCTGCTATA-CAGACTG GATATACTGAAAATA  69 49
HF553_RS18470 3776825 .. 3776839 -  -7.2  -3.86822   TAATGTTCTGAGAAA               TACAGA ATA TCTGTA               GATCTGATGTTTAAT  70 164
HF553_RS18465 3775240 .. 3775272 - -12.8   -2.6583   GACATGGTAAAGGCA      TTAGTCTCCTCCGC AAGTA GCAGAGGAGACTAT      ATGTTACTCAACGAT  81 49
HF553_RS18460 3773587 .. 3773607 -  -7.5  -3.36569   TTAATTGTGTAAACA            GGGTCTCTC AGA GAAAGGCCC            TTATGCATCACCTGA  63 168
HF553_RS18430 3767221 .. 3767235 -  -2.1  -3.70773   GGCGATATTCAAGAA              CGG-GA TCTA TCACCG               TTTTCCCTCCAGAAT  49 20
HF553_RS18425 NONE
        brxC 3762948 .. 3762966 - -14.6  -3.61219   AGAAAATCCTGCAAA             GGGCAGCA GAG TGCTGCCC             TGAAATGGGAGTTAC 100 37
        pglX 3759180 .. 3759191 -  -3.6  -4.49316   ACGATGAATAAGAAA                GCGC CAAA ACGC                 GAAAAGGAGATTTTG  64 155
        pglZ NONE
        brxL 3754000 .. 3754019 -  -7.9  -2.82015   CTTACATTGATGATA            TGGCGAT GTTTTT ATCGCCA             TTACCTGTCGTGCTG  55 458
HF553_RS18380 3750036 .. 3750063 -  -5.6    -4.053   AGTATCGGAGATAAA        CCAC-GCCCTG TACCTGC CAGAGCGGTGG        TTTGTATTTACTGAA  65 93
HF553_RS18375 3748513 .. 3748542 -  -4.3  -2.63785   AACGTAAAAAATCAG       TAGGGGAATATTCC TGT GGATT-TGCCCCTA       TATTTCCAGACACCT  46 23
HF553_RS18370 3748137 .. 3748153 - -10.1  -3.21924   TCACGGGGGATAACA              GGCAGCA GAG TGCCGCC              GGCAGGCCGGAGATT  74 76
HF553_RS18365 3747469 .. 3747492 -  -6.7  -2.79796   CTGTATTTTACCACA          GGGCTGG TTTTCTGCTG CCAGCCC           TGTGGTTCTCAGACA  55 41
HF553_RS18350 3743827 .. 3743843 -  -7.9  -4.66953   TGAATAGTGTAAAAA              CGGGAGA CTC TCACCCG              GGATTATCCACTCAT  85 134
HF553_RS18345 NONE
HF553_RS18340 3741140 .. 3741154 -  -5.8  -2.70275   GAAGTCGATACATTA               TCTAAT AAA ATTAGA               ATATTACATACAAAA  49 405
HF553_RS18330 3739085 .. 3739112 - -17.8  -5.45652   AGGGTGAATAAAAAA        GCCGGTACCCAC AAAA GTGGATACCGGC         AGGTACAAAACAGCA 100 334
        ag43 3736161 .. 3736185 - -21.5  -4.54727   TCCCTGAAAGTAAAA          GGCCCCGGTCA TAA TGACCGGGGCC          TGAAGGGAAGTGACC 100 47
HF553_RS18320 3735058 .. 3735071 -  -2.4  -3.10597   GCTTTCAGGGAAAAG               GCAT CAGCGC ATGC                TCTCCAGCAGTGTTT  42 15
HF553_RS18315 NONE
HF553_RS18310 3733997 .. 3734012 -  -2.5  -3.55444   CGGTGACGGGTTAAA              GCAGA CCGTGT TCCGC               AAAGGAGAAAACCTG  48 5
HF553_RS18305 NONE
HF553_RS18300 3733190 .. 3733211 - -10.1  -2.55811   GAAAAATGGAAAAGT           GGCGTGGTG AAAG CACCAGGCC            GGAGCAGAAGGTTAT  70 50
        cbtA NONE
HF553_RS18285 3732298 .. 3732320 -  -9.1  -4.61873   GTTTATAAACGAAAA           CGCCAGCCC TGTTC AGGCTGACG           TCAGTGGAATGAAGT  90 55
HF553_RS18280 3731331 .. 3731374 -  -6.3  -4.97666   AACAGATGATAAAAA TACATGCATGGTCTGAG-ATAC CCT GTCTACTC-GACCATGCA-GTA TGGTTCAACTAAATC  81 68
HF553_RS18270 3729168 .. 3729191 -   -14  -2.62613   TTTGATGGGAAATAT          TCAGGGATAC GATC GTATCCCTGA           GACAGGCCAGAATTC  86 39
HF553_RS18240 3721787 .. 3721797 -  -2.6  -3.90328   GACAATGGCGATAAA                 TATT ACA AATA                 TAATCAGTAACGTTC  54 29
HF553_RS18230 NONE
HF553_RS18225 NONE
HF553_RS18220 3717813 .. 3717823 -  -3.2  -3.20573   GCATTTAGATTAAGA                 GCAC CTA ATGC                 GCTTATTACCAGTCA  46 340
HF553_RS18215 NONE
HF553_RS18210 NONE
HF553_RS18205 3716170 .. 3716189 -    -5  -3.06839   TCATTAAATAATAAC            GCGTTC TTGCTTCT GAACGC             CGTCAAGGAACTATA  51 28
HF553_RS18200 3715748 .. 3715764 -    -8  -3.53091   AGCGCGCGCGCTAAA              CAGGCA TATAT TGCCTG              CAAAATAAGATTAAC  67 36
        golT NONE
        golS NONE
        golB 3706343 .. 3706357 -   -10  -2.81088   AAGCGACGTAACAAG               GTAGCG TTG CGCTAC               TTATTTGTTATCTTT  71 216
HF553_RS18165 3704856 .. 3704870 -  -5.8  -3.53712   AGGTCCAACAATCAA               TTTCTT ATA AAGAAA               AAAGTAAGCGATGAT  57 157
HF553_RS18160 NONE
HF553_RS18140 NONE
HF553_RS18135 NONE
        cydB NONE
HF553_RS18125 3696019 .. 3696045 - -18.8  -4.83169   ATCTGTCGATAAAAA         CGCGCTTTCGCC AGC GACGAAAGCGCG         TCCGGGGGTATCAGT 100 40
HF553_RS18120 3694832 .. 3694843 -  -7.2  -2.62396   TAGCGGCGGATATTA                CCGC TCTG GCGG                 AGCGCGTTACGCACA  57 32
        foxA 3692353 .. 3692366 -  -5.9  -3.89346   CGCTTAGCGCAGAAA               CGCCC ACAT GGGCA                AGATTAATGGCCTGG  63 255
HF553_RS18105 3691372 .. 3691396 - -12.2  -3.72374   TGCCAGGAATAAATA         TACCCGCC-GG AAAC CCAGGCGGGTA          TTTTTATGATGCAAC  93 45
        prpB 3688448 .. 3688483 -  -8.2  -3.86897   CGTAGGCCGGATAAA    CGTAG-TGCCATCCGGC ATT GCCTGATGGCGGCTTCG    CCTTATCAGGCCTAC  72 44
        prpC 3687217 .. 3687229 -  -3.4  -3.19091   AGAGTGAGTTAGCAA                CGAT CGTCT ATCG                AGACAAACTGGCGAT  46 6
HF553_RS18085 NONE
        prpE 3683332 .. 3683342 -  -8.2  -2.70932   CCCTTCCGTGAAGCA                 GCGG GTA CCGC                 GTTAAAAGGCGACCG  57 475
HF553_RS18070 3679219 .. 3679242 - -15.4  -3.61715   CATTCCTTGCAATAA          TGCCCGTCAA GTCC TTGACGGGCA           TTTTTCAGTTTAAAT 100 69
        iprA 3678228 .. 3678243 -  -3.2  -3.65902   CCGATCGTATGCAAA              CGTTGA TTTA TCAGCG               CACACAGTTAAAGAA  51 359
        sbmA NONE
        yaiW 3674377 .. 3674390 -  -2.3  -4.08767   TTCACTCTCTCAAAA               TCGCT GTTC AGCGG                GAAGCATCGAGAAAC  56 334
HF553_RS18040 3673464 .. 3673483 -  -7.8   -2.7127   TTAGGTAACGATAAC            CCACAGGC CAGC ACCTGCGG             CGAAATCGTACTGAA  55 412
HF553_RS18030 NONE
HF553_RS18025 3670546 .. 3670571 - -14.1  -3.03781   TTAATTTAAACCATA         TCGTAACGGCA GAAG CGCCGTTACGA          TGCACCGCTATTGGC  89 33
        iraP 3669912 .. 3669968 - -21.3  -2.82635   ACTGTTATTACCATA GCCGCTTCGTTTTTATTTTCTTCTG GTTAATA CAGAGCAAAATAAAAACGAAGCGGC CAGGGCTATTTTATA 100 79
        psiF 3669316 .. 3669349 -  -3.9  -3.85704   GGAGGAAGTATGAAA     TTTCGGGTGAG TGTTTTTCAGGG CTCACCCGATA      GCACTACGCCGCTTT  55 29
        adrA 3667977 .. 3667992 -  -6.8  -3.61371   AAATGGTACTCGAAA              CCGGAA AGCA TCCCGG               CGAACTGAAAGATAT  60 182
HF553_RS18000 3666566 .. 3666579 -  -8.1  -3.14132   GCGTTCCCCCAGGAA               CTGCG CATA CGCAG                GATTTGATATCAGCA  64 176
        aroL NONE
        yaiA 3665746 .. 3665762 -  -2.1  -2.64877   TGGAGATACAATTTA              GGGGTAC CCG GAATCCC              TTCCGAGTGGTTCAT  39 45
HF553_RS17985 NONE
        ppnP 3664182 .. 3664211 -  -2.1  -4.57073   GATCCGCGCGAAAAA       GCAG-GATCTGGTC AGC GACGAGATCGCCGT       TCATATTGAAGCGGG  65 313
         mak 3662274 .. 3662284 -  -8.2  -4.07568   CCTGCTGCTGCAAAA                 CGCC AAA GGCG                 GCGAACTGCTGGGCG  77 257
        phoB 3655865 .. 3655906 - -13.1  -3.85389   CCTCAAGAATGGAAA GCCTTCTCCGCCAG-AAACC TGT GATCAACTGGCGGAAAAGGC ATTAAAAGCGGGTCG 100 27
        phoR 3654495 .. 3654516 - -13.1  -4.90525   TAACTGCAAAGAAAA           TAAGCCAGC ATCC GCTGGCTTA            TGGAAAGTTATACTT 100 52
        brnQ 3652771 .. 3652793 - -16.3  -5.64304   CAACACAATAAAAAA           CCACGGGGC GTTAA GCCCCGTGG           TGTACACATATGTCA 100 47
        proY 3651312 .. 3651364 -  -9.2  -2.66216   CTCCAGGAGGAGAAG CGGCTCCGC-TTATCCGGTCTACCG TTGC CTGCAGACCGGATAAGGCAGAGAAA AACGACTACGCCTGC  66 31
        malZ 3649294 .. 3649330 - -16.1  -3.53224   CACCTGGCCCTGAAA    TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA    GACAAAAAACTGTCA 100 86
        queA 3645297 .. 3645323 -  -6.6  -2.72344   TCCGACGTTTAACGA         CTCGCTACGGAA TGA TTCCATAGCTAA         TAAATTCCCGAAGGC  55 155
         tgt 3644137 .. 3644153 -  -5.1  -3.54779   ATTAAAATTAATCAA              CGTTCAA AGG TGGAACG              GGTCGCCCCTGACGT  56 1
        yajC NONE
        secD NONE
        secF 3640873 .. 3640892 -   -10  -6.04953   ACATAAATAAAAAAA            TCCCGATC GCAT GACCGGGA             TTCAGATAACACTTA 100 50
HF553_RS17885 NONE
HF553_RS17880 NONE
HF553_RS17875 3638966 .. 3638985 -  -6.4  -6.20267   TTAAAAACAAAAAAA            TCCCAACC TTGC GATCGGGA             TTCCAGTGACAATGT 100 209
HF553_RS17870 3638552 .. 3638573 - -15.9  -5.07107   TAAACCTGCAAAAAA           GGCCAGAGG TCGC CCTCTGGCC            CGTTTCGGGCGCATG 100 75
        nrdR NONE
        ribD NONE
        ribE NONE
        nusB 3634081 .. 3634123 -  -5.6  -5.61277   CAGAAAAAAAGAAAA GGCCGG--AGACGGCGGG TATCGATCG CCCGCTATCTTTCCGGCC TGTGAATCACTTTTT  93 32
        thiL NONE
        pgpA 3632216 .. 3632237 -  -5.3  -4.57569   TGACGTGGGTAAAAA           TTTATACGCT GAA AGCG-ATAAA           AATGATGCGCAAATA  73 369
        thiI 3626620 .. 3626630 -  -8.2  -2.61144   CGACCGTGGAAATAT                 CGCC GAC GGCG                 CGGCGCTGACTATTG  56 155
        phnW NONE
HF553_RS17770 3619876 .. 3619924 - -14.7  -3.53444   GGATGGCGGCGTAAA CACCTTATTCGGCCTACAAAACG GTA CAGTCTGTAGGCCGAATAAGCGG CAGCGCCATCCGGCA 100 47
HF553_RS17755 3617614 .. 3617661 -  -5.5  -3.90112   CTGTTGGCAATGAAA GGCGTAAGCGAAGCGCTGATC GTGGCG GAAGAGCATTCCGCTTACGTC AAAATCGACAGCAAA  61 132
HF553_RS17740 NONE
HF553_RS17735 3612531 .. 3612553 -  -2.7  -2.62616   TCACGCTGTATATCA          TTGCGTTTGC CGTT GCAA-CGCTA           ATGCTCACGTTGGGC  40 301
        bolA 3604743 .. 3604756 -  -9.5  -5.23292   TCAGACAAAACAAAA               CGGCC CGCA GGCCG                TTTTCACATAATTCT 100 86
         tig 3603115 .. 3603136 - -11.6  -5.93809   GCGTGACAAAAAAAA           CCCGTCAC TGAAAG GTGACGGG            TTTTTGTGCAAATTT 100 61
        clpP NONE
        clpX 3600728 .. 3600746 -   -11   -4.3623   ACAGGAAAAACGAAA             GGGGAGAT AAA ATCCCCCC             TTTTTTGGCTAACTG  90 58
         lon 3598177 .. 3598206 -  -8.6  -5.72616   AGCTATACAAAAAAA       GGCTGGCAAGTCC GAAAT AG-CCTGCCAGCC       CTGTTTTTATTAGCG 100 58
        hupB 3597703 .. 3597722 -   -10  -5.45652   ATCGCCAATAAAAAA            GGCACATC AGTT GATGCGCC             CTTGTACTTTGTCAC 100 61
        ppiD 3595533 .. 3595548 -  -7.5  -4.39571   CTCAGAAATGGAAAA              GGCCG GGAAAG CGGCC               TTTGTGGGATACAAC  77 73
HF553_RS17660 3595014 .. 3595036 - -10.7  -3.00601   TAAACGACAAGTACA           GAGGTCATA ACTGG TATGACCTC           TACAGTCTGGCAAAT  76 61
HF553_RS17655 3594189 .. 3594215 -    -5  -3.54741   GATGAGTTCGTCAAA         GCGCTGAATCAC GCG GTGAATCTGGGC         ATGGCGAAAGATATC  55 380
         cof 3591049 .. 3591067 - -10.3   -6.0458   AGAAACCAAAAAAAA             GCCAGAC TGAAT GTCTGGC             TTGCTGGAAGAGATC 100 43
        decR NONE
HF553_RS17625 NONE
HF553_RS17620 3585771 .. 3585787 -  -6.5  -5.30616   GCAGGGAAAGAAAAA              CGCACCA CGA CGGTGCA              TGATGGGCGAGGCTT  87 60
        glnK NONE
        amtB 3583858 .. 3583876 -  -4.4  -5.33848   ATCACAATTAAAAAA             CATGCCGC TAT GCGGCGTT             AATGGCCTGATGACG  84 102
HF553_RS17600 3582177 .. 3582197 - -16.9  -3.14132   CGCTGGGTGTATTAA            CCCTCTCCG TAA CGGAGAGGG            TTGGCGCAGGATTAA 100 37
         ffs 3581189 .. 3581211 -  -5.5  -3.33696   TCGCGCTTGAATTAA          CGGAAC-GCG AGTT CGCCGATCCG           AAAACCAGCGCGCCC  53 420
HF553_RS17580 NONE
        rpmJ 3579327 .. 3579350 - -13.9   -5.4505   GCCGGTAATAAAAAA          GTGCGCACC CTCCCT GGTGCGCAC           TGCTTTCCCTGAACT 100 50
        acrR 3571699 .. 3571719 -  -4.8  -4.61868   TAGCGACACAGAAAA           TGTCCAGGA GTTT TCCTGGA-A            TATTATCAGGGGGAG  73 31
        mscK 3568059 .. 3568086 -  -9.8  -4.58283   GAAGGGTTGCAAAAA        GGCCTTGAGCAA GGGT TAGCACAAGGCC         GTGAGGCCGAAGCGC  91 183
HF553_RS17515 NONE
         apt 3565290 .. 3565314 - -16.5  -3.09671   AGGGTAATGCTAACA          CAACCTCGCCG ATA CAGCGAGGTTG          TCTCTCTGGCTAAAA 100 62
        dnaX 3563290 .. 3563308 -  -9.6  -3.30124   CTTGATGGTTCACAA             TCGCAAGC CAG GCTTACGA             TCAAATGGGGCGGAT  74 26
HF553_RS17500 3562941 .. 3562954 -  -2.3  -2.64099   GGTTTGCATCAGAAT               GGCAT CTTA AAGCC                TGGCGGCAGTTGCAT  39 5
        recR 3562237 .. 3562253 -  -3.7  -3.67558   GATAGACCTCAACAA              TGCCATT TTT AATGGTA              AAAATACGTTGAGGG  53 101
        htpG 3560247 .. 3560259 -  -9.1  -3.30124   CCGTAGGCCGGATAA                GACGC TTC GCGTC                GCCATCCGGCAGTCA  71 110
         adk 3558891 .. 3558905 -  -4.2  -3.30441   CAGCAGGCCGGATAA               GGCG TTCAGGC CGCC               ATCCAGCACCGATTG  50 114
        hemH 3557793 .. 3557817 -  -4.2  -3.21416   TATGGCGAGGATGAA          GACGCCGC GTTAACGGT ACGGCGCC          GTGAGTTTCAGCATC  48 10
         gsk 3555017 .. 3555041 -  -7.8  -3.14211   ACCCGCGTGGATGAA          CTGCGCGAAC GCGGG ATTCGCGCCG          TGCTGGGCAACGCCG  57 361
HF553_RS17455 3550045 .. 3550061 -  -5.8  -4.56597   TCTGGGCGCGAAAAA              GGTCGA TATGG CCGACC              CGATGGTGGCGCAAC  75 357
        cueR 3544502 .. 3544514 -  -2.6  -4.63218   CGTGCGGGAACAAAA                GCCG ACCGA CAGC                CGCCTTAACCAACGC  65 218
        fetA 3542519 .. 3542537 -    -3  -2.74523   GTATTGGTAATATTA             TGCTCGTT CAT AACGCGCC             TCCTGCATCTCTCCG  41 4
        fetB 3541723 .. 3541734 -  -7.2  -3.30124   CCTCAGGCCGGATAA                GGCG CTTG CGCC                 ATCATCCGGCAACTA  63 41
HF553_RS17390 NONE
HF553_RS17385 3536100 .. 3536123 - -12.4  -3.41701   GCGACTAAAAAAGTA          CGCGCCGTTT TAAA AACCGGCGCG           AAATTATTCACATCA  90 45
HF553_RS17380 3534777 .. 3534811 -  -2.1  -3.84451   TGGCGTAAAGGGAAA    TGCCGGATA-AGAGGT CTTA ACGCCAACATCCGGCA     CAGGAAAACGCTTTA  51 38
HF553_RS17375 NONE
        sfbB NONE
HF553_RS17365 3531931 .. 3531954 -   -11  -5.27923   CAACTGGAGAAAAAA          GCCGCGAATA TCGT TTTTCGCGGC           CCATGGCAAGACGTT 100 103
        allA 3529155 .. 3529169 -  -7.2  -4.12254   TATGAGCATAAACAA               TGAACA ATA TGTTCA               TCTTATGCAAGAAGG  72 50
        allR 3528271 .. 3528290 - -13.6  -3.67443   AAAATTTTAAAAAAG            TCCCGCTC CAGC GAGCGGGA             TGCGGCTCAGGCTAC 100 32
         gcl NONE
         hyi NONE
        glxR 3524632 .. 3524657 - -11.9  -3.01712   TGTTCCTTGTGAACA         GGTATCGCTGC AGCC GCAGCGATACA          CATAATTAGGACAAT  81 31
HF553_RS17325 NONE
HF553_RS17320 NONE
        allB 3520324 .. 3520344 - -16.9  -3.83378   CCTTAAAATAGAGAA            TGCCCGTCG TGA CGACGGGCA            TTAAATCACACCGGA 100 41
HF553_RS17310 NONE
        glxK 3517621 .. 3517631 -  -2.4   -3.8062   TAACCTCGACAACAA                 CTGG GTG CCGG                 TGAAAAAAGGCGACT  52 226
HF553_RS17285 3512659 .. 3512673 -    -2   -3.6682   CGCCACTGATGTAAA               CATGGG AAC CCCTTA               TTGCAAACGTTCTAA  49 23
HF553_RS17280 NONE
HF553_RS17275 NONE
HF553_RS17270 3509647 .. 3509681 -   -10   -3.8323   AAGCTTAAATAAACA    GCG-TGGGCGGCG-CA TTCTC TGTCGCCGCCCGTCGC    GATCACAGACAGATG  80 28
        cysS 3505136 .. 3505165 - -15.1  -6.28401   GAAAAAATAAAAAAA       CAGGCCGTTCTAT GCAA ATAGAGCGGCCTG        TAAAAGCGCTTACTT 100 35
        fimA NONE
        fimI NONE
        fimC NONE
HF553_RS17200 NONE
        fimH NONE
        sfmF 3495315 .. 3495325 -  -5.4  -4.67607   TGTCTAACAAAGAAA                 TTGC CGA GCAA                 CTTTTATTGAGTAAC  73 185
HF553_RS17165 3491533 .. 3491562 -  -2.9  -5.60864   GACATATTAAAAAAA       GCCGCAGTAGAC TCAATTG GTC-ACTGCAAC       CATGAATGACAAAAG  83 525
HF553_RS17115 3483983 .. 3483999 -  -9.4  -5.45726   GACAGGCCAAAAAAA              GCCCTG ATTAA CAGGGC              TACGTTATTTATGTT 100 41
HF553_RS17110 NONE
HF553_RS17105 3482990 .. 3483019 - -14.3  -3.13867   TTATTCATCAACACA       TTGTCGGATGGCG CAAG CGCCACCCGACGA        ATCGCGGCATAAAGA  95 55
        pheP 3480039 .. 3480070 -   -16  -2.56596   TGCGCCATTAATGGA      TTGCCCGATCGCAT GAGC ATGGGATCGGGCAA       AAAAGTTAATGAGCC 100 31
HF553_RS17085 3476437 .. 3476449 -  -3.3  -4.56607   GGATGAAGGAGAAAA                CGGGT GAC ACCGG                TTTGCGCCTACGATG  64 82
        ramA 3473768 .. 3473803 -  -2.6  -4.56597   GCGCTGGCGCAAAAA    CTGGTCGGGATC TTTCATCTTATG GATCTCAACCAG     CTTTATACTTTGTTG  65 133
         fes 3468027 .. 3468045 -    -3  -3.13475   GAATTCCATACTCAA             CTCCTGTC ATG GACATGTG             CCCGGTTAAAGCGTG  45 31
HF553_RS17035 NONE
        entF 3463855 .. 3463881 - -11.1  -5.45652   AGTTGCAATAAAAAA         CCCATAATAAT TAGTC ATTATTATGGG         TTTCAGGATTTAATT 100 65
        fepE 3462503 .. 3462522 - -12.2  -4.05389   CACACAGATGACAAA            GCCGGATA TCGC TATCCGGC             TTTTCGGGTAAATCA  93 38
        entS 3458127 .. 3458137 -  -5.4  -3.28712   GTTTGCCGGCGACAA                 CAAC GAT GTTG                 CGGCCCTTTACGCCA  52 228
        entC NONE
        entE NONE
HF553_RS16985 NONE
        dhbA NONE
        entH 3452087 .. 3452098 -  -2.2  -2.58651   CAACATGATAAAACC                GGAT TGTT ACCC                 ATTTTTTACATTACA  39 102
        cstA 3449846 .. 3449871 - -11.9  -2.78798   ACCTGTCATCCAAAT         GCCCTCTCC TTAATTCT GGAGAGGGC          TATTGATGTAAAAAG  79 42
HF553_RS16965 3449315 .. 3449327 -  -3.4  -4.81249   CCGCAAACGGAAAAA                TTCC TGCAC GGAA                CGAAAGTGGCTTATG  70 324
HF553_RS16955 3446993 .. 3447012 -   -10  -3.22339   AGAAAACGTCACGAA            CGGATGGC GGCA ACCATCCG             GCATAACCGCGCGCG  74 228
        ahpC 3442099 .. 3442116 - -12.7  -4.05788   GGTGCTGAAATGAAA             TGGGCGC GGGT GCGCCCA              TGACTGAAACAATTT 100 162
        ahpF 3440286 .. 3440306 - -14.1  -5.63517   CGTTGAAATAAAAAA            CCGTCTGTT ATT AACAGACGG            TTTCAGAGTATTGAT 100 165
HF553_RS16920 NONE
HF553_RS16915 3437274 .. 3437286 -  -5.5    -3.445   CTATTCACTAAAAAC                GCACG TCT CATGC                TACGGATTCCCCTTT  57 20
HF553_RS16910 NONE
HF553_RS16905 3435913 .. 3435945 - -13.4  -2.83903   GCGGCTAAAAACTGA      CACGCCCTGCCAGG TCACG CCTGGCAGGGCTTT      TTACTGCATCATCGT  86 40
HF553_RS16895 3433955 .. 3433974 - -12.2  -2.87881   TAATGCGTTTACACA            GAGGATGC CTGC GCATCCTC             TTTCCGTTAGCCCTT  80 54
        dpiB NONE
        dpiA 3422923 .. 3422941 -  -2.4  -3.59979   CCCCGGCATCTTAAA            CCA-GGC TTAGCC GCCGTGG             TAAATACGCTGCGGC  49 13
        pagP 3420377 .. 3420393 -  -7.3  -4.02302   TTTACATGAAAAATA              GACACAA ATG CTGTGTC              GGATACCAGTACAAC  72 171
        cspE 3420097 .. 3420113 - -10.8  -5.81032   TAAGCGCAAAAAAAA              CCCGCC GAAAG GGCGGG              TTTTGAAATCTTGCT 100 54
HF553_RS16815 3418715 .. 3418734 -  -5.6  -4.72272   CTTCTTCACTAAAAA            CAGGCTGCG TAA CGC-GCCGG            ATTAACCTGAGAATA  74 113
        tatE 3418441 .. 3418455 -  -9.2  -5.81412   TTCAGGCAAAAAAAA               CCGGCA ACT CGCCGG               TTTTTTTACTCTGCG 100 60
HF553_RS16750 3406228 .. 3406241 -  -8.1  -3.04461   GACGCAGGCGCAACA               CCAGC AGTG GCTGG                AACAGCATCTGACCC  60 191
HF553_RS16725 NONE
HF553_RS16720 3399775 .. 3399796 - -10.1  -3.54653   ATTCCCAGGAGATAA           CCGGACAGC TTGT GCTGCCCGA            TTTGGTATCAGAACG  77 33
HF553_RS16715 3398760 .. 3398775 - -11.8  -3.85698   CTGTTGGTTTATAAA              CGGGCG AGAC CGCCCG               TCGTGATTTATTTTC  93 51
HF553_RS16710 NONE
HF553_RS16705 3396203 .. 3396226 - -13.2  -3.05521   ACTACACGCTTAACA          TG-GCGGACGG CAA CCGTCCGCTCA          CGATAATGAACCTTA  86 38
        ubiF 3383996 .. 3384011 - -10.4  -4.60041   AGCCACCTTTAAAAA              GCTCGC TTCG GCGAGC               TTTTTGCTTTTCTGG  91 130
        nagE 3374820 .. 3374843 -   -11  -5.75342   TTGCGGTAAAAAAAA          GCGGC-GAAGG TTT CCCTCTGCCGC          TTATGTTTTCTGTGA 100 84
        glnS 3372965 .. 3372981 - -11.5  -5.38951   AATGCAGAGAAAAAA              CGCCGCA GAA CGCGGCG              TTGATAAGGTATTTT 100 68
        chiP 3371133 .. 3371159 - -12.2  -3.01712   GGTCGTTCCTCAACA         GCGCGGCAGGCC GGC AGCCTGCCGCAT         CTGACATCAGAAAAT  81 32
HF553_RS16570 3370741 .. 3370767 - -13.7  -5.07107   TAAAGCCTGAAAAAA         CCACGGGCGGA AAACA TTCGCCCGTGG         GTGGCAAGGCAGGTT 100 42
        seqA NONE
         pgm 3360671 .. 3360686 - -10.4  -5.47159   CGTTAATACAAAAAA              GGAGCC GTAA GGCTCC               TTTTTCTTCCATATC 100 46
HF553_RS16460 3346620 .. 3346634 - -11.4  -5.60993   TGGCGCATAAAAAAA               CCGCCA GCG TGGCGG               CTGACGGTTTTTCAG 100 52
        phrB 3345100 .. 3345123 - -13.9  -2.67747   TCCTGATAGCAGAAT          GCCCGGTAG TTTGCG CTACCGGGC           CTGTATCACGCCCCT  86 31
        ybgI NONE
        pxpB NONE
HF553_RS16435 NONE
        pxpA NONE
         nei 3339236 .. 3339252 -  -2.9  -3.54543   ACCTATGCGCCCAAA              CAACCTT TGT AGGGCTG              ATAAGCGTCGTACCA  48 75
HF553_RS16410 3336417 .. 3336427 -  -5.4  -4.95758   ACGACACCAGAAAAA                 GCAT ATA ATGC                 GTAAAAGTTATGGGG  78 33
        sdhC 3335645 .. 3335658 -  -3.1  -2.78384   GCGTTGCTTACCATA               CG-AGG ACT CCTGCG               AGAAGTGAAAGCACG  43 4
        sdhD NONE
        sdhA NONE
        sdhB 3332451 .. 3332471 - -14.1  -2.55351   GCCGTGGATACTAAC            CACGCATAC GCT GTATGCGTG            CCGGGGTTCACTTGT  87 351
        sucA NONE
        odhB 3328184 .. 3328197 -  -6.7  -2.81464   CCATCAGGCATTACA               CCATC GCCG GATGG                CGGCGTGAACGCCTT  55 77
        sucC NONE
        sucD 3326004 .. 3326022 - -11.7  -5.33866   TAAAGCCATAAAAAA             GGCCACC GTAAA GGTGGCC             AACCATGTCGAAAAC 100 75
        cydA NONE
        cydB NONE
        cydX 3321516 .. 3321530 -  -4.3  -3.56568   CAAGCAGCGTTCAAA               TCTGT TCCTG ACAGA               TTTGTTACCCCAGTC  54 133
        ybgE 3321099 .. 3321124 -  -9.1  -4.82154   AAGGGAGAGTAAAAA         TATATGGGCTT ATGC AAGCCCCTATA          TTTTTAAGGAGGTTT  90 46
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal 3316156 .. 3316167 -  -2.2  -2.52896   TGATGTCTGAAGTTA                CTGC TCAT GCAA                 TTCTCTTAGTAAACC  39 31
        cpoB 3315326 .. 3315373 - -14.3  -3.15579   TCAACTGCTTAGGAA TCGCACGACGCGACCAGAAAA AAGGCG TTTTCTGGTCGCATGGTACGC ATTACATCGCGTTAA  95 27
HF553_RS16310 NONE
HF553_RS16305 NONE
HF553_RS16300 3314699 .. 3314713 -  -2.1  -3.10409   TACCAACTGAGCTAA              CGACCC ATAC GGGT-G               CTGCCTGAAAGATTT  42 156
HF553_RS16295 NONE
HF553_RS16290 3314394 .. 3314408 -  -8.5  -5.24989   GCAGATAGCAAAAAA               GCGCC TTTAG GGCGC               TTTTTTACATTGGTG  95 36
HF553_RS16285 3314238 .. 3314252 -  -9.2  -4.84527   TGCAGATAGCAAAAA               GGCGCC GCC AGCGCC               CTCTTTTACACTGGT  90 37
        nadA NONE
HF553_RS16275 3312123 .. 3312179 -  -3.9  -3.22774   CAGATGGAGTATCAA GTG-TG-TCACGGCCCGGACTGTCATCTG AAT CAGACGCCA-TCCGGGC-ATGTTCATCAC CATTAACGGGAAAGC  48 28
        aroG 3309307 .. 3309334 - -15.7  -3.06315   TTAATATTGGCAATA        TCGGTCCGGTA GACTGT TACCGGACCGA         TATGTTTTCTATCCT  93 69
HF553_RS16245 3306698 .. 3306709 -  -5.8  -3.63627   CCTGGATACCTCAAA                GCCT TGCC AGGC                 AAGATATAGAGGCTA  60 175
HF553_RS16235 3304357 .. 3304367 -    -4  -3.77832   TCTCAAATTTAATAA                 TCTA AAA TAGA                 AAAGTAATATCAGGC  55 42
HF553_RS16230 NONE
        oadA NONE
HF553_RS16220 3300931 .. 3300944 -  -8.1  -3.09491   TACAGATCCATGCAA               TCCGG TAGC CCGGA                CAGGCGCAACGCGCC  62 62
HF553_RS16215 3299984 .. 3300001 - -11.3  -5.76633   CCATAGACAAAAAAA             GCGTGGA ACCA TCCACGC              TTGAGGCTGCTGACA 100 188
HF553_RS16210 3298698 .. 3298728 -  -4.7  -2.52834   GACCGGAGCATTAAC      CCGCG-CATCAGAG ACTC CCCCGATGTCGCAA       TACAATGCTTAAAAA  46 2
HF553_RS16205 3297864 .. 3297909 - -18.6  -3.29511   CGGATGGCGGTATAA CTGC-CTTATCCGGCCTAC GAGCAATGG GTAGGCCGGATAAGCGCAG CGCCATCAGGCAATA 100 45
HF553_RS16160 3288665 .. 3288682 -  -9.8   -5.1356   CTTGAGTAACAAAAA             CGCCCG ACTGAG CGGGCG              TTTGGGGAAATCAGC  93 36
        modA NONE
        modB NONE
        modC 3285784 .. 3285798 -  -6.4  -3.95456   AAAGGCAACAGTAAA               GGCAAG CGC CTTACC               CAGTGGATAGAAGCG  65 230
         pgl 3283908 .. 3283936 - -17.4  -3.87815   GTTCAGGCTTATAAA        CGGGCCGCCGCA GCAGA TGTGGCGGCCCG        TGGTTTTACTGCAAG 100 114
HF553_RS16125 NONE
HF553_RS16120 3280203 .. 3280217 -  -2.1   -3.3382   CGGATGACAGATTAA              CGC-CA CCAG TGCGCG               ATTTGCCAGCCAAGC  45 7
HF553_RS16115 3279332 .. 3279349 -  -7.1  -3.08176   TAAGAATCAGACATA             TACTTGT CTAT ACAAGTA              AGCACAAGAATAGAA  60 105
        hutU NONE
        hutH 3275862 .. 3275872 -  -8.2  -3.14051   TGACGTTGATGAAGA                 CGCC AGC GGCG                 CGATGGTCGGCTTTA  60 178
        bioB NONE
        bioF NONE
        bioC NONE
        bioD 3270375 .. 3270394 - -12.2  -3.54488   TCTGGCGAAAGAACA            GCAGGATC GTCT GATCCTGC             AAGAAGGCGGTTTTT  88 49
        uvrB 3267704 .. 3267728 - -10.7  -4.17089   CTGAAATTCTCAAAA          GCGAGCCATGG TAA CGATGACTCGC          TGGCGATCGACACAT  88 43
        slrP 3264901 .. 3264928 - -13.6  -3.40403   CTGCGCTTATCAGAA        GCCTGTTTACACC GAA GG-GTAAACAGGC        TCTCTCCCCCTTCTG 100 56
        moaA 3262559 .. 3262573 -  -2.8  -2.76492   TGACTCATCTGAAAT               CTCCTT ATT AAGGAT               TAACCGCCAATGTAA  41 25
        moaB NONE
        moaC NONE
        moaD NONE
        moaE 3260832 .. 3260851 -    -5  -3.53091   ACTCCTGTGTGGAAA            TGATACCC TAAA GCGTATCA             CATTCTGCTACCAAC  56 33
HF553_RS16030 3260069 .. 3260087 - -10.3  -5.76949   TAGTCCTAAAAAAAA             TCCTGGC GCAGG GCCAGGA             TTTTAAGAGATCGCT 100 45
HF553_RS16025 3259126 .. 3259156 -  -9.9   -4.2558   CATTTCTTATTAAAA      TC-CTCGCCGCCATT TTT AATGGCG-CGAGTGA      CGTCTTTAGCTTCAC  84 122
HF553_RS16020 3258465 .. 3258499 -    -5  -3.64703   CTGCCGTCATGGAAA     TTCGCACTGGCG CAGATGGCGAT CTCCAGCGCGAA     CTGGATGGCGATGGG  58 347
HF553_RS16000 3254915 .. 3254925 -  -2.4  -3.53091   ATTTTCGTCGGCAAA                 GCGG TGC CGGC                 GCTGATTGTCGCGAC  47 417
        rhlE 3247945 .. 3247989 -   -10  -2.71011   ATGGCGGTGCAAGCA CCTTACCCGGCCTACGTATT TGCAT AGTCCGTAGGCCCGGTAAGC GTCGCGCCACCGGCA  71 57
        dinG 3245674 .. 3245687 -  -9.5  -3.24747   TGCTCACAGCATTAA               CGCCG TCGG CGGCG                TGCAGGTTTTGCTTT  72 8
        ybiB 3244359 .. 3244394 -    -6  -4.41844   AAAACCTGCATAAAA    TCGGCGTAGTGTCTGCC GAT GGC-GCCACCACGCTGG    ATGGCCTGGAAGCTA  73 297
        rlmF 3242058 .. 3242071 -  -2.3  -4.11692   TATTCAGTTTGAAAA               CGGGA TGAA TACCG                GCGACTTAGTCACCA  56 522
        ompX 3234881 .. 3234898 -  -9.1  -5.81412   TTCAGGCAAAAAAAA             TCCGCCC CGAA AGGCGGA              TTTTTCATTTTCACC 100 48
        mntR NONE
HF553_RS15890 3230870 .. 3230893 -  -7.4  -4.15106   GATGAACCGGTAAAA          GCCACCA-CCG AGC CGGACGGTAGC          CGTTACATTGAGGTG  74 249
HF553_RS15880 3228006 .. 3228018 -  -3.3  -4.07568   CGCCCCCGTCGAAAA                TCAGC AGG GCTGG                GGCAATGTGATGTAC  58 345
HF553_RS15870 3225584 .. 3225601 -  -4.1  -3.93638   AACGAATCCGACAAA             CAGAAAC TGAT GGTTCTG              CTACGGACGTTCTTT  58 304
        iaaA NONE
        gsiA 3217182 .. 3217193 -  -7.2  -3.36492   GTCTGAATGTTATAA                GCGC GAGA GCGC                 ATTATCCTGCAGCGG  63 8
        gsiB NONE
        gsiC NONE
        gsiD 3213266 .. 3213277 -  -5.8  -3.54424   CTCGACTTCCTGAAA                GAGG CGCG CCTC                 GATCGTGTAGGCTGC  57 458
        bssR 3211658 .. 3211675 - -12.7  -4.56597   GCGGTCCGGTAAAAA             GGGGGAG TCGC CTCCCCC              TTATTCAGACCTGTG 100 30
HF553_RS15810 3210356 .. 3210368 -  -6.9  -2.73243   ACGTAGGTCTGAAAT                GGACG CCG CGCCC                GAATCTGCAACGCTG  52 98
        dacC 3208147 .. 3208158 -    -3  -4.07885   GAGCTGCCGGTAAAA                CATT GGGC AATG                 ACAATGGCACAGAGC  58 239
HF553_RS15785 3204843 .. 3204853 -  -8.2  -4.10429   AACGATGCGTTAAAA                 GCCG TTG CGGC                 AATGTATTATCATCG  77 515
HF553_RS15770 3202178 .. 3202226 -  -5.2  -3.14132   TGTGCTGCGTATGAA CCGGGCGCTGCTGTTCG-GCGCC ATGATG GGCGCGCGTAC--CTGCGCCCCG GCGATGGAAATCATT  50 277
HF553_RS15760 3199650 .. 3199662 -  -5.5  -3.56704   GGGTTATCAAAGGAA                CAGGC GTA ACCTG                CTTTTCATCTGCCGT  57 391
HF553_RS15750 NONE
        nfsA 3198531 .. 3198551 -  -7.5  -4.19276   TGAAAACCCTGAAAA            GCCCGCGTA TCA TACACTGGC            CCGCAGGTTTTAGCG  74 35
        rimK NONE
HF553_RS15735 3196980 .. 3197020 -  -3.4  -5.67967   AGCAGCATAAAAAAA CG-TAAACAG-CAGCCGC GCTGGCA GCGACTGCCTGATTATCG GGAGGGATTAGTGAA  95 33
        potF NONE
        potG NONE
        potH NONE
        potI 3192490 .. 3192508 - -11.7  -3.08032   CTTCCCTGAAAATGA             TGCCGCG ACCCG CGCGGCA             ACGCATTGCCATAGT  81 58
HF553_RS15710 NONE
        rlmC 3190721 .. 3190763 - -16.5  -3.10901   AAATAGGGTAATATA TAACCATGATCGATCGGAG TTTTT CATCGATCGATCATGGTTA TTATTATTTATGGAT 100 86
HF553_RS15700 NONE
HF553_RS15695 NONE
HF553_RS15690 3187046 .. 3187090 -  -2.9  -4.56597   GCGTTGCTGGAAAAA CTGAATAATGCGCTGACCGCC ATTAA AGCGGACGGCAC-TTAT-CAG AAAATCAGCGATCAG  67 274
HF553_RS15655 3182082 .. 3182097 -  -3.2   -2.6574   CAACCAGCCACAGTA              GCGC TTTCATCG GCGC               GTTTTCACCGCCGTT  42 16
HF553_RS15650 3181177 .. 3181195 -  -8.8  -3.13403   TCGCGCGCAGGAAGA             GCTGGGCT ACC AGCCCATC             ATCACGCTGGACGAA  63 91
HF553_RS15610 3170190 .. 3170209 -  -4.2   -4.2461   ATCGCCAGTAAGAAA            CGG-GCCGA GTA TCGCCGCCG            CTATGCGTTACTCGA  66 77
        macA NONE
        macB 3166014 .. 3166034 - -12.6  -4.21462   ATCCAGGAGGCAAAA            TGCCAGCC CGATC GGCTGGCA            TTTTTATTTAACGCC 100 98
        clpS NONE
        clpA 3162764 .. 3162781 -  -9.8  -5.40072   GCCGGCGTAAAAAAA             CCGGGC GCTAAG GCCCGG              TTTGTACGGCAGTGA 100 49
HF553_RS15550 3158376 .. 3158392 -  -7.9  -4.36914   GGCGGCTGGATAAAA              GGTCGGT TTA ACCGGCC              TTTTTTGCGTCCATT  79 63
         lrp 3151363 .. 3151392 - -16.5  -2.75577   CGATGCTAAAACGGA       CAACAGCACCGGG TTGC CCCGGCACTGTTG        CTGTATGGATTAACA 100 82
        ftsK 3147254 .. 3147268 -  -3.4  -4.18494   CAGGTTTACTCAAAA               GGCGGC GGA GCCAGC               ACTTCACGATTACCG  60 1
        lolA 3146462 .. 3146483 -  -2.3  -3.55254   TATTACCAGAAAAAT           CGAGCGA-CA GAT TGCTCACTCA           TCGCCTCTACTTACG  47 32
        rarA 3144952 .. 3144968 -  -9.5  -3.18582   GATTGTATTGATGAA              CGTAAAC CCC GTTTACG              TAATAGCGACGTTTT  72 194
        serS 3143547 .. 3143560 -  -9.5  -5.61596   ACTGGCATAAAAAAA               GCGCC CGAA GGCGC                TTTTTAGAAGAGGAG 100 51
        dmsA NONE
        dmsB NONE
HF553_RS15480 3139364 .. 3139402 - -23.3  -3.53811   TTGATGGTGGCTAAA   GGCGCATTCGGCCTGCA CGTTC TGCAGGCCGAATGCGCG   TCAACGCGTTAGCTG 100 34
HF553_RS15475 3137873 .. 3137898 - -12.7  -3.95749   AAACATAAACAAAGA         GTATGCAAGAC TCAC GTCCTGCATAC          GATTCAGAGAACAGT 100 40
HF553_RS15470 3136009 .. 3136030 - -11.6  -3.53444   TTATCCGCTTTTAAA           CGGCTACC CATGAC GGTAGCCG            TTTTGCTGTCTGGGT  85 269
       sopD2 3133618 .. 3133637 -  -9.3  -6.06529   CATAGACAAAAAAAA            GGCTCCA TGTCAG TGGAGCC             TTTTTAATGACTTTT 100 40
        tnpA 3132907 .. 3132927 - -12.5  -3.76219   AGCGTACAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCAGATGCGCCT 100 106
HF553_RS15435 3126534 .. 3126553 -    -5  -3.70863   CAGACATCAGGCAAA            CGTTATTC ATGT GAATATCG             GTTTTATCATTCAGT  57 142
        serC 3125358 .. 3125378 - -10.4  -5.48623   AAACAGAAATAAAAA            CCCCACAG ACTGG CCGTGGGG            ATGAAAAAAGAAACG 100 43
        aroA 3123932 .. 3123947 -  -3.3  -5.33785   AACTATTATAAAAAA              CACAT AAATCA ATGTG               TTAAATCATCAACAA  81 120
HF553_RS15420 3123002 .. 3123022 -  -5.3  -3.75629   TACCGTTAACGTAAA            CGCCGCGCA TTA TACGCGCCA            ACGCTCGCGACCGTT  59 141
         cmk 3122235 .. 3122259 -  -7.2  -3.06696   GGGTTGTTTAACATA         CCCGCTGTCAA TCCT TTG-CAACGGG          GGTACTACAAATTCG  60 48
        rpsA 3120392 .. 3120409 - -14.1  -3.20382   CGTGAGATTGATTAA             GGGCGGC CGTA GCCGCCC              TTAGTGCTTGATTAC  95 111
        ihfB 3120010 .. 3120024 -  -7.1  -5.42514   GTATAAATGAAAAAA               GCACC CTGAC GGTGC               TTTTTTCGGGTTCAA  95 56
HF553_RS15400 NONE
        msbA NONE
        lpxK 3114746 .. 3114785 -  -3.1  -2.78414   GGAAAGAGAAAGGTA CGGCAATGAC--ATTCATG ACTC CATAAATTCATCACTGCCG  CTGCATTGGGGGGAC  43 42
HF553_RS15385 3113516 .. 3113529 -  -3.9  -3.36452   ATCCTTCAATATTAA               CATAA TCGG TTATG                GTGCAGGGTCTATTT  50 21
        ycaR NONE
        kdsB 3112438 .. 3112451 -  -5.3  -4.45077   GAAAAATGAGGAAAA               TCGTA ACGG TACGA                GAAAGCCGCCACTAG  71 122
HF553_RS15370 3111192 .. 3111224 -  -5.4  -3.98378   GATACGGAAGAAGAA      GCCGCCGCCGTTAA GCAGG CCATCGGCGACGCC      CCTTTCCTGCTGGTA  63 245
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 3103156 .. 3103171 - -11.8  -5.42975   TCAGATAAAGAAAAA              GGCGGC TTTC GCCGCC               CCAGGCTAATGATAA 100 137
        ldtD 3101021 .. 3101045 -  -4.3  -3.35679   CTCCCCCAGCCACAA         CGGGG-GTCT ACAGCG AAACGCCCCG          TTGAAGCCAAACATT  52 71
HF553_RS15335 NONE
HF553_RS15330 3099578 .. 3099594 - -12.3  -5.28176   GTGACCGATAAAAAA              GCCTGCA CAT TGCAGGC              TTTTTCATTCTGCTT 100 39
        pepN 3090766 .. 3090794 -  -9.6  -5.40072   CGTCCGGCAAAAAAA       TACCCGGC-AGCG CTAA CGCTTACCGGGCA        TGTCTTACCTCTTTA 100 53
        pyrD 3089556 .. 3089585 -  -5.7  -4.84918   TGGAGAAATATAAAA       CAACCAGCGCC GGAAATAA AGCCCTGGTTG        TCTGATAAAGGCTAA  76 44
        zapC 3088645 .. 3088658 -  -3.7  -4.05033   GTTACGCCAGAGAAA               CACCC GGAC GGGAG                TGTAACCATCGACTG  58 263
       rlmKL NONE
HF553_RS15280 NONE
        pqiA NONE
        pqiB NONE
        pqiC 3080141 .. 3080167 - -12.3  -6.20267   TCAAAAATAAAAAAA         CCGCCTCAGGC GCACG ACCTGAAGCGG         TTAAATTTACATTAC 100 48
         rmf 3079726 .. 3079742 - -13.7  -3.76534   CCAATAAAGGCGAAA              CCTCCGC ACT GCGGAGG              TTTCTTTTTTCTAAA 100 50
        matP 3076629 .. 3076643 - -12.8  -5.24129   CCGTCTGATAAAAAA               CCCCGC TTC GCGGGG               TTTTTTGCTCTGGTC 100 63
HF553_RS15230 3073700 .. 3073720 -  -7.5  -3.36749   CAGCCTGAAGACGAA            CAGCGCGTA CAC CAGGCGCTG            GAGGGTTTAAAGCAG  61 174
        helD 3069051 .. 3069061 -  -8.2   -3.9122   GAGCGCCTGAAATAA                 CCGC TAC GCGG                 GCGGGATGCTGTACC  72 50
HF553_RS15200 3067216 .. 3067237 - -10.1   -4.1899   TGATTGTATTTAAAA           GGCCGGAAA GCGA TATCCGGCC            ATTTAAACTTTTATT  85 36
HF553_RS15185 3064824 .. 3064836 -  -3.4  -3.04144   TCCTGATGTCGAATA                TGCA TCTCC TGCA                CCGTGCCGTCCTCTG  45 43
HF553_RS15180 NONE
        yccX 3063627 .. 3063658 -  -5.8  -5.06414   TTCGGCGAAGAAAAA      GGCAACAGCCGCTA TCTG TATCGTCTGTTCCC       GAAAGGCCCGGCAAA  84 86
HF553_RS15160 3062132 .. 3062153 - -14.5  -5.04249   CGCCCAAAAAACAAA           GGGGTTACC TTTC GGTAACCCC            TTGTTTAATCTGGCG 100 36
HF553_RS15145 3059551 .. 3059579 -  -9.5  -2.71731   TTTACGTCTTAACTA        TGCCAGCGCCG TCACTAT CGGCGCTGACG        CAGACAATACTGCTT  64 157
HF553_RS15130 3056841 .. 3056861 -  -3.2  -3.15527   AAAACGATGCAAAAT           GCG-CAGAC GCTC GCCCGTCGC            CTGACCAATAATATT  43 320
        hiuH 3052686 .. 3052701 -  -3.2  -4.43911   AAATGGCAAGTAAAA              TAGCCC TAAT GGGATA               GGCTCTAAATTAGCT  62 35
HF553_RS15085 NONE
        hpaE 3046606 .. 3046623 -  -2.7  -3.83026   CTTGCCCATATCAAA             CT-CCCCA TTT TGGGATAG             GATGGTCGCCCATTG  52 3
        hpaD NONE
HF553_RS15070 NONE
        hpaH NONE
        hpaI 3043615 .. 3043629 -  -4.9  -3.04144   GGGCCAGGCTTAATA               GACGC CGGAC GCGCC               GGACAGTTTTTTTTC  51 5
        hpaX NONE
        hpaA NONE
HF553_RS15045 3040257 .. 3040279 - -17.8  -3.68359   TCGCCAAAAGCATAA           CGGGCTGACA TCA TGTCAGCCCG           TGGGTTTACCCCTGC 100 49
HF553_RS15025 NONE
HF553_RS15020 NONE
HF553_RS15015 NONE
HF553_RS15010 3033974 .. 3034007 -  -4.3  -3.83026   TTTTCTTACAGTAAA     CGCGTTAGCGCCGGG AAAC CCCGGCGCATATTCA      AAACGTTTTTGCCCA  58 23
         agp 3032604 .. 3032625 - -15.1  -4.28791   AACGTATAACACAAA           CGCCCCCGC CTGC GCGGGGGCA            TACGGCTATTTTGCG 100 31
HF553_RS14990 3031124 .. 3031141 - -14.1  -6.02919   TTATAAACAAAAAAA             CCGCCGG AAAT CCGGCGG              CGGTGGCGCATGACG 100 85
        rutR 3029930 .. 3029952 -  -9.8  -3.59979   TTCGCTGAGCGTAAA           CACTGCCGCC GCT GGCGGTAATG           CCAGCCTGATGACAA  77 499
        putP 3024016 .. 3024041 - -15.5  -2.66964   GGACTTATCAGAGGA         CCAGGCAGGCGT ATA ACGCC-GCCTGG         TAAAATATGTCCGAT  93 67
        phoH 3022363 .. 3022386 - -14.6  -3.58905   ACGCTTTATAGACAA          CAAAGCCCGG TCTC CCGGGCTCTG           AAAGTCAATGCCATA 100 41
HF553_RS14945 NONE
HF553_RS14940 3016173 .. 3016191 -  -4.6  -3.28416   GATTATCGATATGAA             TACTAAGC AAA GATTAGTA             CAGTAACTCTTTAAC  52 46
HF553_RS14935 NONE
HF553_RS14930 3013381 .. 3013393 -  -5.5  -3.44454   CCAAAAACAACAAAG                CCCGA CAG TCGGA                GTTCACACCAGAACA  57 164
HF553_RS14920 NONE
HF553_RS14915 3012174 .. 3012184 -  -2.6  -4.21462   ACTTAGTATGGAAAA                 TAAT TTT ATTA                 TGTATAAAAACTTGA  58 196
        ghrA 3003455 .. 3003470 - -11.8  -3.64703   CGTTTTTTAGCGAAA              CCCGGC CCGC GCCGGG               TTGATATCAATATCC  89 32
HF553_RS14860 NONE
HF553_RS14855 3002036 .. 3002074 -  -2.6  -3.07622   ACACATTTTATGCAA  TGATGTAAAAC-CCGTT GCAGTT AATGGTGATTTACATCA   CATTATTCTTCATCT  43 28
HF553_RS14850 3001468 .. 3001486 -   -16  -4.91109   GGCGCATCAGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTATTTTG 100 33
        csgB 2997133 .. 2997147 -  -3.6  -4.11216   CTGCCACTTTTAAAA               GTTTCA TGG TAAAAC               CCCCATCGGATTGAT  57 59
        csgA 2996643 .. 2996658 - -10.4  -5.75342   CCTCCCGAAAAAAAA              CAGGGC TTAT GCCCTG               TTTTTTTATTAGCGC 100 51
        csgC 2996296 .. 2996306 -  -3.2  -4.77036   CGCCACCATCAAAAA                 CTAC TGT GCAG                 AAGGCGGCCATTGTT  69 15
HF553_RS14805 2995839 .. 2995851 -  -3.3  -2.82015   TTTATATCTATGACA                CCGCC GTT AACGG                TACTCAATATTCATC  43 19
        ymdB NONE
HF553_RS14795 2993752 .. 2993764 -  -3.3   -4.0896   AAACCGCCGGTAAAA                CGAGA AAG TCGCG                CCACGATCGGGTAGT  57 56
        mdoG NONE
        mdoH 2988233 .. 2988251 -   -11  -4.91511   ATTTCACTATAAAAA             TACCGGCA TCA CGCCGGTA             TTTTTCACCTCACTC 100 55
HF553_RS14775 2987945 .. 2987957 -  -6.2  -2.52015   TTGATACCGAGGAAG                GCCG TACTG CGGC                AGACGAATGGGATGA  53 48
HF553_RS14755 2983923 .. 2983956 - -16.8  -3.53761   TAACGCCTGGCGAAA     TGCCGGATAGCGGC CTTTAC GCGGCTATCCGGCA      AAATATTACTCAGCC 100 31
        rimJ NONE
HF553_RS14695 2974820 .. 2974831 -  -4.4  -3.60296   CAGCCGGACGCTAAA                TTCG CCAG CGAA                 TCCACATACGGTATG  55 191
        murJ 2971981 .. 2971993 -  -9.1   -5.1101   CGATTACCGAAAAAA                CGCAG CAT CTGCG                CGACCTCAACCAGCA 100 264
        flgB NONE
        flgC NONE
        flgD NONE
        flgE NONE
HF553_RS14645 NONE
        flgG 2966144 .. 2966175 - -11.4  -3.09004   TCATCTTCAAAATCA      GGGAGCCGGTGGCG TATC CCCCACCGGCGGCC       CCTTAGAGTTGCGTC  79 28
        flgH NONE
HF553_RS14630 NONE
        flgJ NONE
        flgK NONE
        flgL 2960600 .. 2960628 - -14.6  -5.55664   TGACGACTAAAAAAA        TGCCCGCGCC GGGGTGGAT GGCGCGGGCA        GACAAAACATATCCA 100 69
        rluC 2955246 .. 2955263 -  -5.5  -3.57144   TTCTGGACGGCGAAA             TCACCGG CAAA CCGCTGA              CGGAAGAAAAAGCGC  55 443
        yceD NONE
        rpmF 2954029 .. 2954040 -  -5.8  -2.62184   TCGGCTTTTACACCA                CAGG CACG CCTG                 TGATGCAAAAGGCAT  50 55
        plsX 2952820 .. 2952853 -  -2.9  -3.57263   ACCGTTACCTGTAAA     CGTCTGGCACGCTGGC GGC GCCGGGGAGACAG-CG     ATATTATCTGTGCGC  50 29
        fabH 2951838 .. 2951848 -  -2.4  -2.92669   ACTAGAAACGAATCA                 GCGC GGA GCCC                 CAGGTGAATCCACCC  41 1
        fabD NONE
        fabG 2949999 .. 2950012 -  -2.3  -4.25848   AATTTCCTATCAAAA               CTCGC TTTC GCGAT                GGTTTTCGTAGTGTA  57 145
        acpP 2949705 .. 2949731 - -13.1  -5.02287   GACAAAAAGATAAAA        CT-CAGGCGGTC GAAC GACCGCCTGGAG         ATGTTCACTTACGCC 100 34
        fabF 2948367 .. 2948383 -  -7.2  -5.24531   ATGCCTGATAAAAAA              GGCCCG ACAAG CGGACC              TTTTTATTAATGTCT  91 55
        pabC NONE
        yceG NONE
HF553_RS14545 NONE
        holB NONE
HF553_RS14535 2943995 .. 2944013 -    -6  -2.77899   TTTGCTTATTAATTA             CGAGCTCT AAA AAAACTCG             TTTAACGGATTGGTG  53 27
        ptsG 2942243 .. 2942260 - -12.7  -5.52384   GCGCCATTAAAAAAA             GGCAGCC GAAT GGCTGCC              TTAATTCTCCCCAAC 100 52
        hinT NONE
HF553_RS14515 NONE
        lpoB NONE
        thiK NONE
        nagZ NONE
HF553_RS14495 2935836 .. 2935851 - -10.4  -5.67063   TTGAGCATAAAAAAA              CCAGCC GCAA GGCTGG               TTATCCGGTCACTGA 100 63
         ndh 2934294 .. 2934323 - -15.8  -3.42583   GCAAGAGATGGAGAA       GCG-CTCACCGGC GAGCA GCCGGTGAGGCGC       AGAGAAATTAATGCA 100 33
HF553_RS14485 2933566 .. 2933592 - -10.1  -5.60993   CTTCGGATAAAAAAA         GCCCCTCAGCC TGAGC GAATGAGGGGC         TAACTTGCAGAGTAC 100 48
HF553_RS14475 2932336 .. 2932357 - -15.9  -5.28176   CTGACTGACAAAAAA           GCCTCGCGA TGCA TCGCGAGGC            TTTCTCTTTTTATTG 100 75
        lolC NONE
        lolD 2925503 .. 2925536 -  -4.5  -3.83675   CAAGCCAATTAACAA     TGATAAAGGCGACGC CATT ACTCCGCCCCCATCA      GGCTCAGTTCCGCCG  58 9
        lolE NONE
        nagK NONE
        cobB 2922353 .. 2922372 -  -3.4  -4.11394   AGGCGAGTGGCAAAA            CGATGTCG GCGA CGCCAGCG             CCATTTATGAAGAGT  58 151
        pepT 2915436 .. 2915448 -  -3.3  -2.64218   ACGCTTCACCACAAT                GCGTA ACA TTCGC                TACTGGCCGCGCTTC  42 25
HF553_RS14405 2914077 .. 2914105 -  -8.8  -2.71074   GAAGGATAAGAACAT       CGCAATGCCCGGC GACC GCCGGGC-TGACG        CAAACTATCCACAAC  64 30
         icd 2904415 .. 2904434 - -11.4  -5.11063   AGGAGGTAATAAAAA            CGGGAACC CTTC GGCTCCCG             TTCTTGTTTAATCCA 100 50
HF553_RS14305 2898002 .. 2898021 -  -7.8  -4.94058   TTAATGCAAAGAAAA            GCGCCATC ACCC AACGGCGC             TTTAAGGGAAATGAA  87 60
HF553_RS14290 NONE
HF553_RS14285 NONE
HF553_RS14280 NONE
HF553_RS14275 2894632 .. 2894654 -    -7  -2.58699   GAATAAGGGAACTCA           TGCAGCACCT CCG AGATGCTTCA           TGTTTTTGCCGGAAC  55 0
HF553_RS14270 NONE
HF553_RS14265 NONE
HF553_RS14260 NONE
HF553_RS14255 NONE
HF553_RS14250 NONE
HF553_RS14245 NONE
HF553_RS14240 2889148 .. 2889163 -  -7.5  -5.85737   ACATCAATAAAAAAA              CCCGC TCGGTG GCGGG               TTCTTGAAGATTATC 100 134
HF553_RS14235 2888702 .. 2888719 -  -6.2  -5.26316   GTAGTGCACAAAAAA             GGCCGC TCACAG GCAGCC              TCTTTTTATAATTCA  87 46
HF553_RS14230 NONE
HF553_RS14225 NONE
HF553_RS14220 2887252 .. 2887263 -    -3  -3.21464   AATATTAACATGGAA                TCAT CTCT ATGA                 AATTACAGGTCCTTT  45 131
HF553_RS14215 2886696 .. 2886718 -  -7.8  -3.47387   GTAAAATATCCATAA           TGAGAGAG TACTTGT CTCTCTCA           TATAAAAATCAATCT  67 34
HF553_RS14210 NONE
HF553_RS14205 NONE
HF553_RS14200 2883986 .. 2883998 -  -2.6  -2.79327   TTACCTCAGTTAAAG                CGAG CGGAT CCCG                TAGGACTCAATGTGG  41 7
HF553_RS14195 NONE
HF553_RS14190 NONE
HF553_RS14185 NONE
HF553_RS14180 2880667 .. 2880691 - -13.6  -3.30124   CTTCACCCGTCAGAA         CAGGGGGCGCG GTTC CGCGCCC-CTG          AGTGATTACGCCGCT 100 31
HF553_RS14175 NONE
HF553_RS14170 NONE
HF553_RS14165 NONE
HF553_RS14160 NONE
HF553_RS14155 NONE
HF553_RS14150 NONE
HF553_RS14145 NONE
HF553_RS14140 NONE
HF553_RS14135 NONE
HF553_RS14130 NONE
HF553_RS14125 2873836 .. 2873851 - -10.4  -5.55769   CCTCATAACAAAAAA              CCTGCC TAAT GGCAGG               TTTAGATGTATGAAT 100 51
HF553_RS14120 NONE
HF553_RS14115 2871405 .. 2871420 -  -3.2   -3.0263   ATCATGTTCTGAAGA              GGATGG TTAG CCATCA               GAAATCCGCCTCCTC  45 23
HF553_RS14110 NONE
HF553_RS14105 NONE
HF553_RS14100 NONE
HF553_RS14095 NONE
HF553_RS14090 NONE
HF553_RS14085 2866994 .. 2867029 -  -3.2  -4.10453   TAAAGTTTTTCAAAA    TCCGCCATAGTTACGTT TTG ATCGCG-CTGTGGCGGA    TTTTCATTTTCGTAA  57 52
HF553_RS14080 2866551 .. 2866569 - -11.7  -5.27206   CATAGACAATAAAAA             CGGGGAC GTTAA GTCCCCG             TTTTTGTTTTTAACA 100 51
HF553_RS14075 2865840 .. 2865860 - -12.5  -3.94772   GCTAATAAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCTGATGCGCCT 100 106
        sopF 2864270 .. 2864284 -  -8.6  -3.69323   TCATGATCATTTAAA               GCTCTT TTA AAGAGC               CTGATAATAAGCTTG  72 41
HF553_RS14065 NONE
        artA 2862131 .. 2862162 -  -7.4  -3.70444   ACTTAATAAACAATA      TTAACCAGACCACT AATA AACGGTCTGTTTAA       TTTAATAGGCAACAT  67 54
HF553_RS14055 2861120 .. 2861132 -  -5.5  -3.04263   ACCGGATGGTGAATA                TGCCA AAG CGGCA                ATCATTCATGACTAC  50 350
        pagC NONE
HF553_RS14015 2855280 .. 2855292 -  -3.4  -4.20932   AATACTTATTCAAAA                CTGA AGTGG TCAG                TGGGAGTCGAACCCA  60 88
HF553_RS14005 2853688 .. 2853712 - -12.8  -2.64354   TTATACACCTACAAT          TTGCGCCCGG CTACT CCGGGCGCCA          TACCTGAAGATATGA  81 66
HF553_RS14000 2853169 .. 2853185 -  -6.5  -3.38361   AAAGTTCAACATCAA              GGCAAGC ATT GCTTGTC              CACTGACTACATAGG  59 166
HF553_RS13995 2852630 .. 2852647 - -12.7  -3.39142   GCTACAGGCAATGAA             GGCCCGT CTAA ACGGGCC              TCTATTAACGCGATT  90 39
HF553_RS13990 2850866 .. 2850876 -  -2.4  -3.76586   TCTTAAACACAAATA                 CCCG GAT CCGG                 TCATTACGCCTCCCC  50 428
HF553_RS13975 2847872 .. 2847889 -  -2.7  -2.62111   GCCGCAAAAAATGAC             TGAAGAA CAAT TTCATCA              CCGACAGGTCCAGGT  40 23
HF553_RS13970 2846918 .. 2846933 -  -5.4  -2.82516   CGGGGCAGGATTATA              GAGCAT CGGG ACGCTC               CAGCGATCGATTAAG  50 5
HF553_RS13965 NONE
HF553_RS13960 NONE
HF553_RS13955 2844672 .. 2844693 - -11.6  -3.21276   TCTCTGCCGACAATA           CCGGGAAC TCATGG GTTCCCGG            TGCGTTAACGGCGAC  81 68
HF553_RS13945 NONE
HF553_RS13940 2842876 .. 2842894 -  -4.4  -4.20368   TTATTTCAACAGAAA             CTCAGCGG CCA CCGCGCAG             GTGGCCTTTTTTGAT  64 47
        zinT 2842117 .. 2842136 - -12.2  -5.63504   AACGGCAGAAAAAAA            GCTCGCTA TTCA TAGCGAGC             TTTTAACATTGCAAT 100 46
        aadA 2841174 .. 2841196 -  -2.8  -3.21395   ATGGCCCGCATAAGA          TCATCTGCT TACTTC AGC-GATGA           GAACCTATTAAGTAG  45 89
HF553_RS13925 NONE
HF553_RS13920 2839559 .. 2839583 - -12.1  -3.93236   TATGAAGGGTATAAA          CAAGGGAGGGG TTA CTCCTCCCCTG          TTCGTTAATAATGCA  93 47
HF553_RS13905 2838247 .. 2838261 -  -3.4  -3.06183   CTCATGTGGAGTTAA               CGCGCG CGT CGCACC               AAAGATAAGGCTGCC  45 7
        leuE 2837378 .. 2837399 - -13.7  -2.60725   CGAAAGGAGAGCAAT           GACCCGCCG TTGA CGACGGGTC            CAGGGGGTTAAGACT  86 33
HF553_RS13895 NONE
HF553_RS13890 2836609 .. 2836639 - -16.2  -4.28254   TTTCAATACGCAAAA       GCCGCATCACGC TGGCGAC GCGCGATGCGGC       TTTTCATTTAAAGAA 100 73
HF553_RS13885 2835671 .. 2835703 -  -5.5  -3.14051   TTATCTTTATCAACA      CCGAGTAGTTGAGTT TAT AACCCACCTGTTCGG      TACGACATTGCTCAC  54 138
HF553_RS13880 2835208 .. 2835232 - -11.6  -3.63694   ATTCATTTTGAATAA          TAAAGGCTAC CTGTC GTAGCCTTTA          TTATCTCTGAAAGTT  87 47
HF553_RS13870 2834504 .. 2834522 -    -6  -2.57581   TTAACTGAAACATAT             TTTCTTGC GCC GCATGAAA             CTCATTATCAGATTG  53 73
HF553_RS13865 2833824 .. 2833839 -  -3.2   -4.4009   CGCTATCCGACAAAA              GTACCG TAAG CGACAC               CATCACAGGAGGGAA  62 376
HF553_RS13850 2831554 .. 2831586 -   -12  -3.60296   TACGCTGATGGGAAA     CCAACC-GCAGCTCG TCGC CGGGCTGCTGGTCGG      TACGGTACTTGGCGT  81 96
HF553_RS13840 2830418 .. 2830437 -  -3.5   -3.1634   GCCGAAATGACTGAA            GTCGCGA AGGGTA TCGCTAC             ACACCAACGTTTAGT  47 512
HF553_RS13825 2828211 .. 2828235 - -12.9  -3.69354   GTGCATAACCCTAAA          CCTGCCCGT TGTTATT ACGGGCAGG          TTTATTAGCAACTTA 100 147
HF553_RS13810 2823638 .. 2823654 - -10.1  -3.97947   TTCAGTTAGCACAAA              GCCTGCA TAA CGCAGGC              TTTGTCATGGTTTTT  82 58
HF553_RS13805 2822141 .. 2822153 -  -3.3  -3.41798   CGGTAAAACAATACA                GGACT CTT AGACC                CTACGGTAATGTCCG  48 73
HF553_RS13800 2821187 .. 2821233 -  -8.8   -2.7752   TATAGGATCTGAAAG GCGTCAGC--CGCCATCAGGCA TGACC TGCCGGATGGCGGCGCTTACAC ATTTTATCCGGCGTC  64 39
        msrB NONE
HF553_RS13780 2817653 .. 2817670 -  -2.5  -4.90217   GAAACAGATTAAAAA             GCGCGGG CTGG CTGGCGC              AATGTTCTGGGAATA  70 214
HF553_RS13760 2813074 .. 2813118 -  -3.6  -2.71731   CTGATGTGGTAAGTA TCACTGTCTGAATTACCGCGC CTTT GCTCAG-AATCCAGACAGTTT TATCCCTCAGCGTCA  43 38
        selD NONE
        topB 2809753 .. 2809770 -  -9.8  -3.53012   TTTGCGCCGGGTAAA             GCCGCC AACGCG GGCGGC              GTGGCGACATCAGGG  71 271
HF553_RS13740 2808079 .. 2808100 -  -4.3  -3.03124   GTGTACGCCGGAAGA           GGCGCTGGAG TAC CCCCT-CGCC           CCGGCGGATATTCCG  47 54
HF553_RS13725 2805198 .. 2805217 -  -2.8  -2.62616   GCATGTTCGACAGGA            CGAATCAC CCGC ATGATGCG             CCTCCCGTCTGAAGG  40 10
        astA NONE
        astD NONE
        astB NONE
        astE 2800362 .. 2800396 -  -8.6   -2.7264   AAATGTGTCCCAAAT     CATCCCTGTAATCCTA ACG TGAGCTTACAGGGACG     TTTATCAGGGCAGTC  64 30
         spy 2799512 .. 2799560 - -11.7   -5.0065   CAGTCATAAAGAAAA CCGCCGATCCTGTCCACCTCA ACGATTG TGTTGTCGACAAGACCGGCGG TCTTAAATTATGCGG 100 45
        osmE 2797069 .. 2797084 -  -7.5  -5.64274   GCAGGCACAAAAAAA              CCGGC TCGCAG GCCGG               TTTCCTTGAATGTTC 100 57
        chbB 2796432 .. 2796450 - -11.8  -3.38603   AAATACCCTTAAATA             CCGCAATA AAA TATTGCGG             TTAGTGTATGAAATA  85 70
        chbC NONE
        chbA NONE
        chbR 2793738 .. 2793759 -  -2.2  -4.15044   CCCGCTCGTAAGAAA           TAGCGTGA CGTTCC CCGCGCTA            TTGGGGCAAGCGTGA  55 69
HF553_RS13660 NONE
        chbG 2791520 .. 2791541 - -15.9  -5.34055   ATAAACAGCAAAAAA           TGCGGCGCA TTCT TGCGCCGCA            AACTCAGGAGCTAAA 100 36
        cedA 2788615 .. 2788635 -  -9.7  -4.72272   GTCTGTCACTAAAAA            CGCCGGT CTCCAGT ACCGGCG            TTTTGTTTTTTTCTT  91 39
HF553_RS13625 2784515 .. 2784527 -  -6.3  -2.83903   CCGCGGAAAAAGGCA                TTACC TTT GGTAA                TATTGACGCCATTGT  50 426
HF553_RS13605 2781522 .. 2781544 - -17.8  -3.69395   GTCACCACGGAATAA           CCGGGTTACG TAA CGTAACCCGG           TACAATATTACATCT 100 33
HF553_RS13595 NONE
HF553_RS13590 2779106 .. 2779127 - -10.3  -2.88758   ACAACCTTCGACACA           GACGAAAAT CGCT ATTTTCGTC            CGGCATGACGATGGT  72 135
        thrS NONE
        infC 2773921 .. 2773946 - -14.1  -4.66987   CATAGGCGAACAAAA         CCTGTGAAGCC CGAA GGCTTCACAGA          ATTGTTACTTGAAGG 100 43
        rpmI 2773653 .. 2773667 -  -2.9  -4.87291   TATTCTAATTAAAAA               GTTAA AAACG TTAAC               GGCTTATGCGTACGG  68 29
        rplT 2773232 .. 2773254 -   -12  -4.99568   GAACAGTAAATAAAA           GAGAGGGAGC CAG GCTCCCTCTT           TTCACTGGCTTATGC 100 35
        pheM 2773034 .. 2773049 - -10.4  -5.76633   TCAGATACAAAAAAA              GCCTCC ATCA GGAGGC               TTTTTTGCGCTGTTT 100 50
        pheS NONE
        pheT NONE
        ihfA 2769137 .. 2769151 - -12.8  -5.64421   ACTTGAAAGAAAAAA               GGCCGC AAT GCGGCC               TTTTTAGTTATACGG 100 146
        btuC NONE
HF553_RS13530 NONE
        btuD NONE
HF553_RS13520 2766016 .. 2766031 - -10.4  -3.04144   CTTGTACTTTTAACA              GGGCGT GAAC ACGCCC               GTTTTTAATAAAAGT  73 150
        ydiV 2764280 .. 2764303 -  -3.1   -4.2679   CAACGGGCAGTAAAA          GACAGG-GTC ATAGG GCCTCCTGTC          TTCAGTGTAGACGGT  60 74
HF553_RS13505 2762811 .. 2762850 -  -7.1  -3.91084   CTACTGTTAACCAAA  TAACGTTCCGCCAGCAG ACGATG CTGCTGGCGTCAGGCTA   ACTTGAACAACTGAC  70 23
        ppsA 2757675 .. 2757710 - -15.4  -3.86524   ACACCGCGGTATAAA    TTGCCGGATGGCGACG TTAA CGCCGCCATCCGGTAT     CACACTACTTCTTCA 100 30
HF553_RS13455 2750743 .. 2750753 -  -6.8  -3.14564   GGAGCGTTTGATTAA                 TGCG GCG CGCA                 GTACAGGTTTCGCCG  54 508
HF553_RS13405 NONE
        menI 2737832 .. 2737861 -  -2.8  -2.74144   CGCTTATGTGTAAAC       GTGCACAGTATA TCACCT TTTTCTGCGCAC        ATTTTGACCAAAAGC  41 71
HF553_RS13395 2737359 .. 2737389 - -12.7  -5.45802   CCCGGAAAAGAAAAA       CCCTTAAGTCTGT TCAAT ACAGGCTTAAGGG       TTCCGGCCCCATCCG 100 256
        sufA NONE
        sufB NONE
        sufC NONE
        sufD NONE
        sufS NONE
        sufE 2729962 .. 2729986 -  -9.3  -3.60952   GAACAACAAAATATA          CGCTCTGTCCA CTC TGGATAAAGCG          ACGTCGCCGTCCGAC  75 79
HF553_RS13355 2728837 .. 2728855 - -14.6  -4.74285   ACGCACAATATAAAA             TGGCGCAC ATC GTGCGCCA             TTTTTTTGTCCGTCG 100 54
        ttrS NONE
        ttrR 2713793 .. 2713808 -  -4.8  -4.93877   CTCTATTAAACAAAA              TTTGAT GCAA ATCAAA               GAAATAACGCAGTTT  77 46
        fumD 2713190 .. 2713201 -  -4.4  -3.39216   GCTTCACGTAAAAAC                CACA CCAA TGTG                 CTGATGCATATCCAG  51 343
        spiC NONE
        spiA NONE
        ssaD NONE
        ssaE 2703966 .. 2703985 -  -2.1  -2.87211   ATTCCCCTCCATATA            CACGATA GATAAT TAACGTG             CTAACTAAGAGCCTA  41 255
        sseA NONE
        sseB NONE
        sscA NONE
HF553_RS13225 NONE
        sseD NONE
        sseE NONE
        sscB 2699566 .. 2699579 -  -3.9  -3.05384   TTGCCGCTGACGGAA               TATGA ATTT TCATA                TTTCGTTCTGTTATT  47 40
        sseF NONE
        sseG 2698088 .. 2698103 -  -3.2  -3.32516   AGAAAGCAATGAACA              TCCGGT ATAT ACCTGA               AAACGATTACTCCGG  48 32
        ssaG NONE
HF553_RS13190 NONE
        ssaI NONE
        ssaJ NONE
HF553_RS13175 NONE
        ssaK NONE
        ssaL 2694301 .. 2694323 -  -3.4    -2.882   CCTAAATATTGAAAG           CCAGGTATCA GAA TAAAACCTGA           TTTATCTTTACTTCA  44 10
        ssaM NONE
        ssaV NONE
HF553_RS13150 NONE
        ssaO NONE
        ssaP NONE
        ssaQ NONE
        ssaR NONE
        ssas NONE
        ssaT NONE
        ssaU 2685593 .. 2685607 -  -7.8  -3.21276   CGCTGCGCGATAATA               CGACGA TAG CCGTCG               CATGGCGGCTATTTT  64 482
HF553_RS13095 2683321 .. 2683346 - -10.5  -2.70932   GTTCCTCGCTAATCA         TCACCCCCGCAT TTC ATGCGGGGG-AA         TCTTATTTTCCGTTA  71 38
HF553_RS13080 2679181 .. 2679194 -  -9.5  -3.05844   CGCTGGAGCGCAACA               CCGGC GCGG GCCGG                CTGGCAGGCTTTATG  67 460
        ynhF 2678141 .. 2678177 -  -7.4  -2.57211   ATCTCGCCGCATAAG   TCTGAGTACGCAGAAGG TACG CCTTCTGCGTT-TTAGA    GAGGGATAGAATAGA  57 70
        grxD 2675894 .. 2675911 - -11.3  -5.15634   TATGGCAGTAAAAAA             GCGACCT TTAC AGGTCGC              TTTCCCCTTGCACAG 100 42
HF553_RS13030 2672486 .. 2672498 -  -4.1   -2.5333   TGAACCATAACAGAT                TCCTC ATA GAGAA                TAATGAGGTTGAGTA  44 56
HF553_RS13025 2671508 .. 2671564 -  -2.4  -3.22113   ATCGCTTCATAAAAC CTCCGTTACATGTGGTCGCCTGT TAAGTGTAAACC ACTGGCGAAAACATG-AACGGAA AGTCAACGAGTTGGC  44 43
        sodC 2670852 .. 2670868 -  -8.7  -2.95521   GCTACAGGAATTACA              GCGTATC TGC GACACGC              TCGCACATCATCATC  62 138
        slyA 2667189 .. 2667223 -  -9.3  -2.92613   CTCCACGCTAAACCA    GGCTTTACGTGTGGTC ACAT GGCCACACGT-ATGCC     CCTGCACCTCAATCG  67 34
        anmK 2665320 .. 2665333 -  -2.4  -3.33744   GGGTCCGGGAAAAAT               TCAG TTAACT CTGA                GTTATTGGGTTAGCC  45 16
        mliC 2664867 .. 2664901 -  -6.4  -4.11183   GTTGATCAGAAATAA    TCAGT-GGGTGGCGC TATTGT GCGCCCCCATACTGA     AAATCTCAACGCTTC  68 31
        pdxH 2664148 .. 2664161 -  -8.1  -2.57982   ACATAGCATAAAACG               GCGGA TTCA TCCGC                ACCAGTGCTTAAAAC  59 56
        tyrS 2662757 .. 2662776 - -12.2  -4.53398   GAACATCAAAAATAA            GGGAGTGA TTTC TCACTCCC             TGTTACTTAATGCCT 100 40
        pdxY 2661771 .. 2661786 -  -3.2  -3.90048   CGTGTCGCAAAAAGA              CCGACCG TTG CGG-CAG              CGCTTAAAGCGGAAG  54 110
HF553_RS12905 2650079 .. 2650126 - -12.8   -3.2794   CTTTATTGACACTAA CGCTCTTCTCCGCCTGCGGTT TAATGCT ATCC-CAGGCGGAGAAATGCG ACATCTCAGGCAAGA  90 31
        fumB 2643692 .. 2643723 -  -9.4  -3.28785   CGGCAAAATAGCGAA      TCATGTTACCGCCC CGCA GGGCGGCGACATTA       CTTAACGCAGCGCGC  74 23
        fumC 2641801 .. 2641820 -    -7  -5.44119   GCCAGTTGAAAAAAA            GCCTCGCG TCGC CGCGCAGC             GTCCCGCCGTGGACG 100 355
HF553_RS12840 2634582 .. 2634594 -  -4.7  -4.36914   CTTCGCGCGACAAAA                TGCGC AAG GCGCG                CCTTCTGCATCGTTA  66 483
        pntA NONE
        pntB 2628876 .. 2628893 - -12.7  -4.87786   TGAAGTGTATAAAAA             CGGCCTC CGAA GAGGCCG              CCGCACGTTTAAAAG 100 42
HF553_RS12810 2627362 .. 2627372 -  -8.2  -2.82208   AAATCAGTTAGCACA                 GCGC ATT GCGC                 CAGCTCAGGCAGAAG  60 48
        mdtJ NONE
        mdtI 2626571 .. 2626607 -  -7.2  -3.21099   CTGGCGCAGGATTAA    TGCGGGAATCGCTGCC TGACC GGCAGCGATCGTCTCA    GGCAAATTTTATCAT  62 23
HF553_RS12780 2622566 .. 2622576 -  -2.4  -3.37612   TTTAAGCGTAATTAA                 TCCC GTC GGGC                 AGCCAGTAATAGCAG  45 11
HF553_RS12775 NONE
        bioD 2620323 .. 2620351 - -13.2  -2.73441   GATGATTTGTGAAAT        GACCGGCGAGTA TCAGT TACTCCCCGGTC        TGCTGATTGCCTGTG  79 67
HF553_RS12710 2606811 .. 2606835 - -10.6  -3.53811   TCTACGCTCCTGAAA          CCCACCGCGC AGTAA GCGCGGCGCG          GTAGTCACGGAGAGT  81 56
HF553_RS12695 2605369 .. 2605401 - -14.1  -4.67755   ATATTTATCTAAAAA      GCGCTGCCCGATCAC AAA ATGTTCTGGCAGCGC      GGCAATGTTACGTAC 100 33
        rspA NONE
HF553_RS12685 2603007 .. 2603021 -  -4.2   -3.0644   AGGCAATCTCTAAGA               GGTAAG ATG CGTACC               ACTTACTCGCAATTA  47 47
HF553_RS12680 2601552 .. 2601606 -  -8.8  -4.99947   GCTAATTAAACAAAA GTGACCGGACAGCATGGCCGAAACCGC ATTA GCG-TTCCGGCCATACCATC-GA-CAC GATTTAACTCGTCTG  91 29
HF553_RS12675 2599851 .. 2599864 -  -3.1  -3.61178   TGGATGCAGGTCAAA               TTCGC CGCG GCAAA                ACGGTGATTGTCGAA  49 161
         dcp 2595496 .. 2595515 -  -5.1  -3.34398   GTTGCGTTTTAAATA            TGATATG TCTTCT CATATCA             TGTGATACAGTTCTA  54 315
HF553_RS12650 2595210 .. 2595228 - -12.4  -5.88565   GTCAGAATAAAAAAA             TGCGAGCC TAT GGCCCGCA             TCGTATGTGCAATAT 100 75
HF553_RS12640 2593553 .. 2593570 - -10.5  -5.81412   GGCAGGCAAAAAAAA             CCGCCGG TTCA CCAGCGG              TAAATGCTTGCATGG 100 267
        eamA 2590378 .. 2590412 -  -2.3  -4.03234   GTGCCGCCACACAAA    TACCG-GA-TCACCA ATATGCA TGGCGAATCACGGTA    TATGCTGCCGCTGAA  54 419
HF553_RS12605 2588640 .. 2588673 - -13.9  -3.13639   AACCGCATTAAGACA     TTCGTCTGCCGGGAA CAGG TTTCCGGCAGACGAC      AATGCGCCTTAGTGG  93 34
         sad 2584940 .. 2584958 -  -4.4  -2.66316   CCTGCGAGTATAGCA             GAGGGCGC CAC GCGACGTC             AGGGCGATTAGACGC  46 33
        glsB NONE
HF553_RS12580 2583586 .. 2583601 -  -6.8  -3.55761   GATTTATCGGGGAAA              GCGTCA GCAA CGACGC               ACTGCCCTACTGCTG  62 32
HF553_RS12575 2582271 .. 2582284 -  -2.3  -3.20349   TGGGCAAACTCAACA               CACGA CAGG CCGCG                AAAGCCAGGTGTGGG  43 179
        ompC 2579887 .. 2579903 - -10.1  -5.49234   ATAGTCAATAAAAAA              GGACGCC AGA AGCGTCC              TGAAATAATAAAAGA 100 127
HF553_RS12515 2571052 .. 2571091 -  -7.3  -3.60035   GATAAAGAGAAGCAA  CCGCCGGTAGTCTC CATTACCTTCGCC GAGACTACCGG-GG  AAACTAAACAGAGAC  67 48
HF553_RS12510 2569995 .. 2570008 -  -8.1  -4.07678   GGCCAAAACAGGAAA               CGTCG CTGC CGACG                AACCTGATCACCTAC  77 294
HF553_RS12480 2562684 .. 2562695 -  -2.2  -4.57569   TTACCCTTTGAAAAA                CCAT TGAT ACGG                 CGATTGTTATATAGC  61 187
HF553_RS12475 2561552 .. 2561573 -  -8.1  -4.08216   TTATTCTCGTTAAAA           CCGGTAGCAT TAT ATG-TACCGG           TTTTATTTTATTCAT  74 37
HF553_RS12455 2559876 .. 2559899 -  -5.8  -2.98545   CCTTGACAATAATGA          CGGAGGGCGG AAAG CAGCCCCCAG           CGTGAATCAGTCATA  52 32
HF553_RS12450 2558724 .. 2558761 -    -7   -2.7035   TTCACTGATAGATCA   GGCACTCCACCTTCGAC CGGTT GTCGGAGGTGGACC-CC   GTCGCAATTGTTGAT  55 111
HF553_RS12435 NONE
        nhaC NONE
HF553_RS12425 2552243 .. 2552259 - -10.8  -3.05384   GCGCTCCGGACCCAA              CCGGCC TTGAT GGCCGG              TTTTTTACTGGCGCT  76 96
HF553_RS12395 2542951 .. 2542965 -  -8.6  -3.04144   TTTGTAGCTTTAACA               TTCCAG AAG CTGGAA               ATACTGCCTGCTTCC  66 44
        hlyE 2541756 .. 2541769 -  -3.7  -4.62475   ATCCAGAAAGCAAAA               GCCGG GTGC CCGGT                ATCGCAGGTTCTGAA  69 198
         bdm 2540608 .. 2540621 -  -6.7  -4.05714   AGTTTTAAGGACAAA               TTCGC TTAC GCGAA                AGAAACGTAACCCCT  70 68
         sra 2540378 .. 2540399 - -13.1  -5.38054   TCCTATAAACAAAAA           CACCATTGC AGAT GCAATGGTG            TTTAACGTCATTTCA 100 52
HF553_RS12370 2538522 .. 2538547 - -11.1  -2.82317   TAAAGAAGAAAGTGA         TATCCGGCGGC ATTC ACCGCCGGGTA          CGTATTAAATGGAAG  74 30
        adhP 2537186 .. 2537211 - -13.4  -3.89346   TCGCGATCTGATAAA         CAAGGCGCTA TCCTCG TAGCGCCTTG          TTTTCATCTGCTGTC 100 70
        yddG 2531015 .. 2531031 -  -6.7  -2.80252   AGTTTCATAAGATTA              CAAATTA TTT TAATTTG              TGTGATCGAGATCTC  55 406
        ompD 2529757 .. 2529777 - -13.3  -5.13344   ACATCAAGAGAAAAA            GCCAGCCCT GAA AGGACTGGC            TTTGTATTCAGACTA 100 49
HF553_RS12335 2528917 .. 2528933 -  -9.3  -4.82901   GCGCCGGCAGAAAAA              GCGGCGG CGG CCGGCGC              GATAGAAACGATGGC  93 369
HF553_RS12325 2526906 .. 2526920 -  -7.1  -3.42405   CACAAAAAAGAGACA               GAGCG TCACG CGCTC               TTTTGAGAACTTATT  65 174
HF553_RS12320 2525430 .. 2525443 -  -2.4  -3.53444   CGATTTGGCGTTAAA               CCAT TACCGG ATGG                CCGTCCTACAGGTGC  47 49
HF553_RS12315 NONE
        narH NONE
        narW NONE
        narI 2518649 .. 2518680 - -12.2  -2.89421   TGAAGAATCATCATA      GCCTGTGCGTTGCC GAAT GACGACGCCCAGGC       GTTTTTCTTTGCCCG  80 67
HF553_RS12295 2517272 .. 2517283 -  -7.2  -3.73968   AAATTGCTCAGCAAA                CGCC GCAT GGCG                 AATACCGCCTGATGC  65 465
        ansP 2513885 .. 2513908 - -14.6  -3.74747   GCAACGCGCATTAAA          CCCGGCAGGCC TGG GGC-TGCCGGG          GAAGGGTAATGTTAT 100 37
HF553_RS12265 2509991 .. 2510009 - -14.6  -3.19642   ACTATGACTTATCAA             TAGCGGGG GCT CCCCGCTA             TTGACGGATATTTGC  95 48
        mddA NONE
HF553_RS12245 2506451 .. 2506465 -  -4.2  -3.79113   ATCGGGCGACAATAA               CGCGTA TAA TAGGCG               AATCATGCTGTTACA  55 300
HF553_RS12235 NONE
HF553_RS12230 NONE
HF553_RS12225 2499558 .. 2499570 -  -3.3  -5.27335   TGTGTCAAATAAAAA                GAGCA TAT TGCGC                GCGTTTTTTCCTCTG  77 281
        yncL 2499243 .. 2499286 - -15.2  -4.15235   AATCGTGAAAAAATA GGCGGGTGTCGGCGGAGAGG GGGA CCTCCCCGCCAACATGCGCA GCAAGTACTCAAAGG 100 50
        sifB 2492815 .. 2492831 -  -2.3  -2.65354   TCCATGCGAAATTCA              TTATTTC CTG GAAGTAA              ATTTTAAAGGTATTG  39 98
HF553_RS12180 2492321 .. 2492335 -  -2.8  -4.65168   ACCACATCTTAAAAA               TGCC CCAGCCC GGCA               GCGTTGTCGCTTCAG  67 91
HF553_RS12165 2488073 .. 2488084 -  -5.8  -3.51232   CCGTCCCCAAACCAA                CGAC CCAG GTCG                 GACAGCAAGTTCTTG  57 492
HF553_RS12145 2484562 .. 2484575 -  -6.7   -3.2964   AAAGCGTGGCTACAA               CAGTC GCTC GACTG                GCCGCAATATGTCAC  56 440
HF553_RS12135 NONE
HF553_RS12130 NONE
HF553_RS12125 2481040 .. 2481051 -  -5.8  -4.13014   GTCATACGCGTAAAA                CAGC CAGC GCTG                 GCGCGATTTAGCCCC  65 491
HF553_RS12100 2474323 .. 2474356 -  -2.3  -4.67982   GGTTACGCAACAAAA    CG-CGTCGCTGGTCG AAGAGG CGTCC-GCGGCGGCG     GCTTCGCTTGAAGAA  65 182
        steB 2470286 .. 2470307 -  -5.8  -3.02144   GTAGGCTGTGGAATA           GCAATGCC GGGAAG GGCATGGC            ATGACACTTTATCTG  52 34
        sseJ 2467487 .. 2467511 -  -4.1  -4.61199   ACGGTATAGACAAAA          CGGCGGCACGT AAA ACCTGGCGCAG          AGTGCCGGAATCCAC  69 333
HF553_RS12060 2465666 .. 2465695 -  -4.3  -2.67143   ATAGCCAGCATATTA       CCTGATGACATAG CTTA CTATTTCATCCAG        CTATCGACAATGCCA  46 13
HF553_RS12055 NONE
HF553_RS12050 2464265 .. 2464284 -  -2.8  -2.79106   AAAGAAGAGAGACCA            GC-CAGCGA TCA TCGTTGTGC            CTCGCTAAAAAAACA  41 14
HF553_RS12045 2463516 .. 2463531 -  -6.2  -3.55973   TAACGCAATAATGAA              GGTTAA AATC TTAACC               AACACTAAATAAAAA  60 90
HF553_RS12040 2461483 .. 2461499 -    -3   -4.4078   GCGCTGGAATTAAAA              CAACGA AGCAA TCGTTA              GGCAAGCATTAATCA  60 435
HF553_RS12035 2460604 .. 2460637 -  -6.7  -4.61199   ATTCCATACAGAAAA     CGCCTGCGTCT AACCAGGACCCG TGACGCAGGCG      AAGGAGGACGGGTCT  79 171
        azoR 2454264 .. 2454283 - -13.6  -2.67316   GAACCTAAGAAGTCA            CCTCCCGT CGAA ACGGGAGG             CAAAAATATTTAAGC  86 35
        ldhA 2449289 .. 2449312 - -12.4  -4.13767   GGGGTTATCCGAAAA          TGCTCCCCTG AGCG CAGGGGAGCG           ACAGGATTAGAACAG 100 32
        hslJ 2448594 .. 2448611 -  -6.9   -2.8552   CGCCAGGGATGAAAG             CGGCGAT GTCC AGCGCCG              GCGAAGCGAATTGCG  56 212
HF553_RS11975 2448242 .. 2448267 -    -4  -3.07655   TTGCGCAAAAAAGAG         GGACACGC ATAATCGTGA GCGTATCC          TGTAGTTATCCTTTT  47 31
        nifJ 2444631 .. 2444649 -   -16  -4.91109   GGCGCATCAGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTGTTTC 100 64
        uspF 2442633 .. 2442643 -  -3.2  -2.55896   CGTATTAATTAAGAT                 GTCA TCA CGAC                 CAGAAAAATATCGGA  42 443
        ttcA 2437329 .. 2437357 - -14.6  -2.66008   AAATGATCGATAGCA        TGGCGTCTCAGC GGAGT GCTGAGACGCCT        GCAGATTATTTCACT  89 31
         ogt 2431410 .. 2431422 -  -4.8  -3.36175   AAGTGTGACCGATAA                GGCA CTTTT TGCC                TGTATATTCATAATA  54 33
         fnr 2430399 .. 2430415 -  -2.2  -3.91352   ATATGGTGAATGAAA              CAGAGG AAGCG CTTCTG              CCAGATCAATAAATG  53 92
        uspE 2429338 .. 2429375 -  -9.1  -3.26531   TGAGTAACAGGAATA   GGGTATTGGCCGGATGGC AGC GCCATCCGG-CAGGACAC   AAGAGGGATTAATCG  70 34
HF553_RS11895 2427764 .. 2427798 - -10.1  -3.12668   CATCCGGACAGGGAA    GCCTCGGTGCCCGATAA GCA TTTTCGGGCACCG-G-C    TATCTTTTATTTTGT  73 32
HF553_RS11885 NONE
HF553_RS11880 2425956 .. 2425968 -  -4.7  -3.76837   CAGAGAACCGAATAA                CCGGC AAT GCAGG                GGCGCAGGCATCCTC  58 78
HF553_RS11855 2420078 .. 2420098 -  -4.5  -3.96148   GTGTGGGAGCATAAA            GGCCCCGCA AGC CGCCCGGCC            AGCATACTCCCATTA  59 286
HF553_RS11850 2418516 .. 2418542 -  -2.8  -2.82036   AGAGATTATTGAAAC         GCAGGGTAAGCC GGA GGTTGACACCGC         AACCGGAATGACGAA  41 342
        bdcA 2416853 .. 2416879 - -10.9  -3.04248   GAACAGCTTCTAACA         CGGTTGCCG GAGCGTAGA CGGCAACCG         TGTGATATTCGCCTG  76 45
HF553_RS11820 2413644 .. 2413680 -  -8.5  -2.57013   TGTTAACTCAAGGTA    GCCACGCCCGCCGCCTG GTG CTGGCAGAAGGCATGGG    GATTAAGCGAGCGCC  63 55
        mpaA 2410819 .. 2410850 -  -3.7  -2.62396   CATCTGTGCAGATGA      GAGCTGCCATACT CGCAGT AGTCTGAAAGCTC       TGACGGGGCGCTACG  42 257
         tpx 2409438 .. 2409461 - -13.2  -5.70829   AAGAGTAGAAAAAAA          GAAGGCCTCC GGAT AGAGGCCTTC           TTGTGACAAAAGAGC 100 84
        pspF NONE
        sapA NONE
        sapB 2399179 .. 2399222 -  -5.2   -4.3277   GATAGAGAAGATAAA TCTCCGGCAATCATCATCGA AGCA TGGACTTGGACTGCCGGAGA AAATAGAAAACAATA  68 124
HF553_RS11710 2395527 .. 2395538 -  -7.2  -3.53012   GTGTTGCGTCTTAAA                CCGC TGCA GCGG                 GTCAGCAGGGGGAAT  65 189
        sapC NONE
        sapD NONE
        sapF 2392152 .. 2392174 -  -6.3  -3.02144   GCAGCCGCGTGAACA           CCCTCAG AGAATCGAA CTGAGGG           TATTTGTGTCGCTTA  56 38
HF553_RS11675 NONE
HF553_RS11670 NONE
        fabI 2388178 .. 2388203 -  -6.7  -3.07816   CGGTGAGTTAGGGAA         TGGGGCAGCAC AGCC GTGCCGCCCGT          TAATAAACTTAATGC  58 43
HF553_RS11660 NONE
HF553_RS11655 2384820 .. 2384846 - -14.5  -4.96427   GAAGAAGAAAAGAAA         CGGCCTTTGCC TTCTC AGCAAAGGCCG         TTGAGCGAGCTAAGC 100 45
        pdeR 2382576 .. 2382586 -  -2.4  -4.00465   GAGAAGGGAAAAATA                 GGGC TAT GCCT                 GTCTGCACAGGCTGT  53 61
HF553_RS11645 2382280 .. 2382307 -  -6.8  -2.94622   ACAGACAGTCAGAGA        GCCGGGAAGGGC TAAC GGCCATCCCGGA         CAAATAATCGCTATC  56 39
HF553_RS11640 2381448 .. 2381469 -  -9.5  -2.72799   GTCTTAGAGAGAGGA           TGATTTGCC ATAG GGCAAACCA            TCGGGAAATATTTTA  69 38
        osmB 2380892 .. 2380917 - -11.9   -4.4078   GGCGGCTAATGAAAA         CGCCACGGT TGTAAATT ACCGTGGCG          TAAAAGTCAACTTTG  95 113
        ribA 2376000 .. 2376010 -  -8.2  -5.19212   ACCAGCAGGAAAAAA                 CGCC GCT GGCG                 GTAATTGCCGGGAAA 100 462
HF553_RS11575 2367708 .. 2367737 -  -5.7   -3.9712   GCAGGGCAGTACAAA       CGTACCCTGACCT TGTT AGGCGAGAATACG        GAAGAAGGGCGGCAG  65 397
HF553_RS11565 NONE
        cobO 2365139 .. 2365161 - -10.4  -3.53091   ATCCCGCTGCCGAAA           GGCCTGCCGC GCG GCGGCTGGAC           TGAGCTCGACCTCGC  74 299
        trpL 2362633 .. 2362651 - -10.2  -5.75342   TTTGTTCAAAAAAAA             GCCCGCTT AAC AGGCGGGC             CGGGTATCGTTTGGC 100 46
        trpE NONE
        trpD NONE
       trpCF NONE
        trpB NONE
        trpA 2356043 .. 2356065 - -12.7  -3.18912   CCAGCCACTCATTAA           GCCGCCAGC GTTAT GCTGACGGC           TTAACCCGTTATGCG  86 34
HF553_RS11510 2355348 .. 2355369 - -12.3  -3.63744   CTCCTGGGCAAAATA           CTGCGAGCC AGAA GACTCGCAG            ATTGCTTGATAAAAG  95 68
HF553_RS11505 NONE
HF553_RS11500 NONE
HF553_RS11495 2353284 .. 2353302 -   -16  -5.14563   GTTGTGACGAAAAAA             GACCCCGC CAG GCGGGGTC             AAAAAAGGACATGAC 100 64
HF553_RS11485 NONE
HF553_RS11480 2351076 .. 2351091 -    -6  -2.80016   TTCCATCATCAACGA              GCGTCG AATG CGCCGC               GTAACGGCGCATTGC  53 44
HF553_RS11475 2350471 .. 2350495 -  -7.1  -3.80535   AAGGCGGAGAAAATA          TCGCCAGGC GTTCGCA GTCTGGCGA          TGATAAGTCACGGGA  68 44
        yciA 2349558 .. 2349569 -  -7.2   -3.6422   CACCGTTTGAAAATA                GCGC CCCG GCGC                 GGCCAACAAGCAGCA  65 408
HF553_RS11460 2348615 .. 2348634 -   -15  -3.91897   TGTGTGAGCCAGAAA            GGGCACCG TATG CGGTGCCC             AACAGGCCATCCTTT 100 41
         cls NONE
HF553_RS11445 2346187 .. 2346199 -  -4.8  -3.39803   TAGTGACAGTCACAA                CCGT GGGGT ACGG                TGATATTACGCCGCA  51 293
        adhE 2335305 .. 2335322 - -12.7  -6.09196   GGTAAAACAAAAAAA             CGGCCTC AATT GAGGCCG              TTATTGTCATGCTAA 100 54
         hns 2333422 .. 2333438 - -13.7  -5.81412   CTCAGGCAAAAAAAA              TCCCGCC AGC GGCGGGA              TTTTAAGCATCCAGG 100 48
HF553_RS11375 NONE
        purU 2328606 .. 2328635 -   -10  -3.06261   GGGTAATGCTTAATA       CTGGCCCGCTTCC TTTCG GGAAGCGGGGC-G       CATCATATCAAATGA  73 136
HF553_RS11365 2328482 .. 2328495 -  -5.3  -3.07816   TGCTCATCGAGTTAA               CTACA TCGA TGTAG                TGAATAATGGTGGTG  51 33
HF553_RS11360 NONE
HF553_RS11355 NONE
HF553_RS11350 NONE
HF553_RS11345 2327665 .. 2327680 -    -6  -3.41024   CTGTGTAAGATAAGA              CCCTGC TCCG GCGGGG               TTTTTTTATGCCTGT  59 198
        narX NONE
        narL 2315956 .. 2315967 -  -3.6  -4.56597   CGTGCCGCTCAAAAA                GCAG CTTG CCGC                 CAGTGAAGTGGCGCA  69 474
HF553_RS11300 2314019 .. 2314029 -  -5.4  -4.28361   TCAAGGTCAGTAAAA                 CAAG CAT CTTG                 TTTTAACAGTGTTTA  67 455
        chaA 2312651 .. 2312671 -  -7.5  -3.53012   CTGCCGCTGGCGAAA            CTGGAGCAG TTC CTGACCCAG            ATAAAAGCGATTGAT  62 136
        lolB NONE
        ispE 2305491 .. 2305505 -   -10  -3.62522   CAACGTCTGGAACAA               GGTGAC GTT GTCACC               GAAGCTCAGCTTGCC  78 160
         prs 2304395 .. 2304408 -  -9.5  -5.76633   TTACAGACAAAAAAA               CCCGC CGCA GCGGG                TTTCAGATCCGGGTT 100 44
        dauA 2302537 .. 2302552 -  -3.2  -3.99324   CGTCACTATGACAAA              CGTTGC CGCC GTAACG               ACAATCGTCGTCATA  55 90
         pth 2301402 .. 2301429 -  -9.8  -2.94099   TTCGCCTATTATACA        CGGCGTGCGGCA AAAA TGCCGCACATCA         CTGGTTATTGCGCCT  70 30
        ychF 2300146 .. 2300163 - -11.3  -5.68438   TTATGAAATAAAAAA             TCCACGC GGCT GCGTGGA              TTTTATGAGTTTCTT 100 88
HF553_RS11215 NONE
        hyaB NONE
        hyaC NONE
HF553_RS11200 NONE
        hyaE NONE
HF553_RS11190 2292784 .. 2292801 -  -6.3  -2.86773   GTAAAAAGCTAATCA             GT-ACCGG ACA CCGGTGAC             GTTCCTGTTGAGAGC  55 42
        appC NONE
        appB NONE
        cbdX 2289911 .. 2289942 -  -6.5  -5.36364   GTAAAAAGATAAAAA      TAACCGGAGTCAG ATGGCG CTGGCCCCGGTTT       ACCTCTTTATTGTTG  91 32
HF553_RS11170 2288239 .. 2288256 -  -7.7   -5.4492   TATACAGACAAAAAA             TCCACGC CGGG ACGTGGA              TTTTAGCGCAATAAC  95 49
HF553_RS11165 2285947 .. 2285965 -  -3.2  -2.59537   AGCGATAAATAAATT             TTTATGTC CGC GAGATAAA             TCAGTGTTCAGAAAT  42 414
        ycgR 2284644 .. 2284654 -  -8.2  -4.68593   CCCATCAGTGAAAAA                 GCCG GGG CGGC                 ATGGGGGGTTGATCC  90 505
        ldcA NONE
HF553_RS11140 2281344 .. 2281355 -  -2.2  -3.41051   GTATCCGTACCAGAA                CAGT AGGC ACCG                 TTTCAATGGATATGC  45 264
HF553_RS11125 2277035 .. 2277047 -  -4.8  -3.76492   CTGAACGGCATGAAA                GGGT TATAC ACCC                GCATTGGTCGCCACT  55 272
        nhaB 2274731 .. 2274761 -  -2.5  -4.68994   ATTATCAGGCAAAAA      TCGGAGCCGGGC GGTGTATT GCCCGGC-CAAA       CGTTACGAAAGCGTT  65 28
        dsbB 2274070 .. 2274085 - -10.4  -5.75342   TTCGGGCAAAAAAAA              CGCTCC CGAA GGAGCG               TGTGTATCAACGACC 100 32
HF553_RS11105 2273226 .. 2273254 -  -6.5  -3.39895   TGTGCTATTAACCAA        CCGCCTGATGCTG CTT CTGTGCCAGGCGG        TTTTTTACATCTTCT  59 413
        minC 2270346 .. 2270358 -  -4.9  -3.29973   TTAAAAAGGGATCAA                TTCAA CGG TTGAA                CTGTCAAAGCGTTGT  54 9
        minD NONE
        minE 2269181 .. 2269210 - -10.9  -5.57054   AATAATGTAAAAAAA       TAAAAAAGGCAGA TTCT TCTGCCTTTTTAA        TCCAGGAATTTTCCC 100 51
HF553_RS11035 2262084 .. 2262096 -  -2.6  -3.73647   CTCAGTCATGAACAA                CAGC AAAAA GCCG                TAGAACGTATCCAGG  50 162
        pabB NONE
HF553_RS11020 2259829 .. 2259842 -  -2.3  -3.19026   TAGTGTAAGAGGGAA               CGCTG GCAT CAGCT                TAACTATTCACATGA  44 204
        sdaA 2258348 .. 2258376 - -13.9  -5.10968   AGGAAGAGATAAAAA        TTTCGCCCATCCG TAG CAGATGGGCGAAG        GGAGGGGAAACGGCG 100 42
HF553_RS11010 2256206 .. 2256222 -  -3.7  -2.71791   AGTGGTGCCGGAAAC              GCTTGAT CCT ATCAATC              TGTTAGGCGTTTTGC  43 457
        manX NONE
        manY NONE
HF553_RS10990 2251881 .. 2251898 - -14.1  -6.04953   AGAGAAATAAAAAAA             CGGGGCC GTTT GGCCCCG              GTAGTGTACAACAGC 100 42
HF553_RS10985 2251332 .. 2251347 -  -6.2  -4.66537   TTGGTCAATAGAAAA              TATAGC CTTA GCTATA               TTATGATTCGAAATA  78 76
        mntP 2250357 .. 2250367 -  -6.8  -3.61715   GACGTGTGGGAACAA                 CTGG CCG CCAG                 CGCCGGACTTAGCTG  62 80
HF553_RS10945 2245493 .. 2245515 -  -9.2  -5.78622   TGACGTTAAAAAAAA           GCAGCTAC GAAAAAT GTAGCTGC           TTTTTTTATAACATC 100 184
HF553_RS10935 2243099 .. 2243116 - -12.7   -4.3534   TGGCAAGTATGAAAA             GCGCGTC GAAT GACGCGC              TTTTTTTACGCCTGA 100 31
        yebS NONE
HF553_RS10905 2234604 .. 2234629 - -12.5  -4.46926   CAGTGTAGCATAAAA         CGCTCCGGCGC GAGT ACGCCGGAGCC          GGGTGTTTAACGTGG 100 32
        rsmF NONE
HF553_RS10895 2232738 .. 2232753 -  -8.2  -4.34486   ATGAAGAATAAATAA              CCCGCC TGGC GACGGG               TTCTTTTTGAGTCAG  79 37
HF553_RS10890 2232444 .. 2232454 -  -2.4  -3.31905   AGCGCGGATACAATA                 GCGG TAT CAGC                 GACCAGGGTTAAAAA  45 34
HF553_RS10870 2229326 .. 2229338 -  -3.3  -3.53012   CCCTGGCTTGTTAAA                GCGGC ATG ACCAC                ATTTTCTATATATAA  50 8
HF553_RS10865 2228336 .. 2228351 -  -7.5  -2.92091   AGAGGTACTCAGACA              GCCGC TTGTAG GCGGC               ATGGTACGGATACAA  59 191
HF553_RS10855 NONE
HF553_RS10850 2226772 .. 2226789 -  -2.6  -4.13767   GGTCGCATTTCAAAA             CTGCAG GAACAT CTGCTG              AATACTGTATACTCC  56 2
HF553_RS10835 2223017 .. 2223037 -  -4.7  -3.79849   TAATCACAGGAACAA           TG-GGCGC AGCCGG GCGCCTCA            TTAGGGCCGGAGTAC  58 170
HF553_RS10825 2221663 .. 2221685 -  -4.8  -3.48395   AGCTTCCTGATATAA           GCCATCCA TTTAGCC TGGCTGGC           TTTATCGTCGTCACA  56 105
HF553_RS10820 2220791 .. 2220801 -  -6.8  -3.41051   CTACCTTTACGACAA                 TGCG CTG CGCA                 CGAAAAAAGAAGCCA  61 368
HF553_RS10805 2218660 .. 2218687 - -11.4  -5.45652   ATTTTTAATAAAAAA        CCGTAAACCTTC ACGA AAAGGCTTACGG         TTTTTTTATCTCTGA 100 343
HF553_RS10785 2216591 .. 2216601 -    -4  -3.18433   ATTCTAAAAAGCATA                 GATT AAG AATC                 GCCTTATAATGTAGT  48 77
HF553_RS10780 NONE
        exoX 2215134 .. 2215164 -  -9.7  -2.91239   TACATAGCGCATAGA      CGCG-CGCCCGCAA TGGC TTGTGAGCGTCGCG       GGTTATTGTGGTGTT  70 28
        purT 2210064 .. 2210101 -  -6.4  -4.83615   CAGGTCTGATAAAAA  TGCGCTAACGTCGCCATC AGGC GATGGCG-CATTAGC-CT   TTTACCGTCACGCGG  80 19
HF553_RS10730 2204482 .. 2204494 -  -3.4  -4.25104   CTCCGTTGACTAAAA                CAAC TTGGT GTTG                CGTGAACATTGATCC  60 115
         pyk 2202947 .. 2202972 - -14.9  -4.49958   ATCCCATCAAATAAA         TAAAGCCTCTC GTAA GAGAGGCTTTA          TGCTGACAAACCCTG 100 71
        znuC NONE
        znuB 2197586 .. 2197618 -  -5.6  -2.73364   CGCTGAGGTGAAGCA     TGACGGGGCTATTTC AGCG GAAATTGCCGCG-CA      GGCGCTGGATATGCT  47 369
HF553_RS10685 2194899 .. 2194915 -  -8.1  -3.17075   GGCGGCTTAATTCAA              TTAATGC TGT GCATTAA              ACTGTGATGGTAATC  64 47
HF553_RS10680 2193582 .. 2193603 -    -5  -3.53811   CGCACGTTGCTCAAA           CTGCCCGC TAACCC GCAGGCCG            ATGCCGCGGATGCGC  55 134
HF553_RS10655 NONE
HF553_RS10650 NONE
HF553_RS10645 2187886 .. 2187902 -  -3.6  -4.85782   TCCGGGAAAAATAAA              GGCGCA TATTG TGCGCT              AATACAGGGAGAAAA  69 24
        cmoA NONE
        cmoB NONE
        argS 2182556 .. 2182584 - -14.6  -5.06414   CTGTGGCAATAAAAA        GGCCTGAGTCCG TTACC CGGAGTCAGGCC        TGATGATGTTAACGA 100 49
        mrdA 2180344 .. 2180359 -  -6.8  -2.56838   GATAGTGAAACATAT              CTCGCC GGAA GGCGAA               CTGCTGCAAACGTCA  51 214
HF553_RS10535 NONE
        uspC 2163644 .. 2163672 -  -7.4  -2.60496   GCTGGCCTGAAATAT       CGCGAGC-GGCGA CTAG TCGCCCGCTAACG        GCACCAGCAACACAT  57 9
HF553_RS10505 2159075 .. 2159092 -  -6.9  -3.21593   GATGTGCCGATAATA             CGCCAGT AGCG ACAGGCG              CCACCTCTGGCAAAC  59 128
HF553_RS10495 2157710 .. 2157729 - -12.2  -4.35747   TAAAAATAAAGGAAA            GCCAGCAT CTTC ATGCTGGC             AATAGCGACCCTGCG  95 83
        ftnA 2156855 .. 2156870 -    -6  -4.63932   GAGGCGGCAATAAAA              GCGCGC TTTG GCGAGC               GGGCACGATTTCACA  75 205
        tyrP 2155234 .. 2155247 -  -3.8  -3.52177   CGGCAAAAAATTTAA               GCAG TGCTGC CTGC                ATTAATGGCTCGTAA  52 105
HF553_RS10425 NONE
HF553_RS10420 2147311 .. 2147337 - -12.2  -3.63627   GCGCCAGACGCGAAA         CCGGCTGAAAGC GAT GCTAACAGCCGG         TTTTTTACTACTGGC  89 33
        fliD NONE
        fliS NONE
        fliT 2135985 .. 2135998 -  -3.8  -3.28712   TTCCGTGCTCCAGAA               GTCG TTTAGC CGAC                CTCTGGAGTATGGAA  50 67
        amyA 2134419 .. 2134432 -  -5.9  -5.24129   CCGCGTTAGAAAAAA               CGCCG CTGC CGACG                CCGCTGCCGTAATTT  83 77
        yedE NONE
        yedF 2132377 .. 2132403 -   -13  -2.60508   TATGCCGTAAAAAGG         TCTCCCGCCGTA ACG TACAGCGGGAGT         ATGCGCTTATTTTTG  84 32
HF553_RS10335 2131688 .. 2131708 -  -8.1  -2.54896   CGCTTACCTAAGTCA            GCGGCGGGG GGG CCGCGACGC            CCATGCAACCAGTGC  59 75
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
        fliK 2124641 .. 2124655 -  -2.8  -3.96148   CCTGTCCACGACAAA               GCGT GGAAAAG ACGC               GGATAATCATGCTAC  54 49
        fliL NONE
        fliM NONE
        fliN NONE
        fliO 2122306 .. 2122329 -  -2.2  -2.56982   AAGGAATAACAAACG          GCGCATCAGG ATCT CCCGGAACGC           TTGAGTAAGCTCTTC  39 7
        fliP NONE
        fliQ NONE
        fliR NONE
        rcsA 2119385 .. 2119407 - -16.2  -4.14392   GGGTAACCGTTAAAA           CGGACGGCGG TCC CCGCCGACCG           GGCGTGGTACTGGCA 100 205
        yodD 2118803 .. 2118814 -  -2.2  -2.80816   CTTCCAGGCAGCACA                TGCG TTGT CACA                 CTTTTGCTACCGAAC  40 209
HF553_RS10245 2117506 .. 2117519 -  -2.3  -4.16279   TAGATTATTTTAAAA               GCGTT AACG ATCGC                TTTGGTCATCAGGCA  56 379
        yedA 2113696 .. 2113732 - -12.4  -3.02144   GGAGCGCCTGGAAGA   GTGGATCTGCG-GC-GGC GGC GCCAGCGCGCAGATCGAC   ATCCAGGGGATTCAT  76 41
       ompS1 2108848 .. 2108872 - -17.9  -3.78934   CTTGCCCTATAATAA          CAAGCCCGCGC TAA GCACGGGCTTG          AATAACATAAAGCGT 100 42
HF553_RS10170 2103566 .. 2103578 -  -4.9   -4.8048   TTTTTATATTAAAAA                TTTCA GAA TGAAA                GGGAGGAATGAGAAA  74 496
HF553_RS10145 NONE
HF553_RS10140 2099126 .. 2099139 -  -8.1  -3.63782   GAAGAGGATGTGAAA               GGGTC GTGA GACCC                TTTTAAACTACATTA  69 70
HF553_RS10120 2093804 .. 2093817 -  -3.9  -4.88736   GACGATTTAGAAAAA               TAACA CACT TGTTA                GTCAGAATCCGATTT  74 138
HF553_RS10100 2090747 .. 2090759 -  -3.5   -4.2131   ACGGATTAAAAAACA                TATTT TTT AAATA                CAAGAAGCCAGCGTT  60 3
HF553_RS10095 2090222 .. 2090245 - -11.8  -2.87146   TATAACAGGAGTATA          GAGCTTCAAC AAAT GCTGAAGCTC           ATAAAAATATTTTGT  80 101
HF553_RS10075 NONE
HF553_RS10070 NONE
HF553_RS10065 2085201 .. 2085217 -  -2.4  -3.65722   AAAACAACCCGTAAA              TAATAT AGTAA ATATTA              TCGGTTAAGCAATGC  49 80
HF553_RS10060 2084653 .. 2084689 -   -11  -3.40566   ATACGACATGGATAA    TCTGGCAGAACCTG AACAGGTAG CAGGCTCTACCAGA    GAAAATCAGAGTTAA  80 47
        mtfA 2081031 .. 2081043 -  -5.5   -3.3482   CAATTGGTTAATTAA                CCCAC AAA GTGAG                GAATTAATGTTCGGA  56 29
HF553_RS10020 2080834 .. 2080863 - -15.9  -2.73529   GTTGATATAAATGCA       GAAAGCAGACGTC AGTG AACGTCTGCTTTC        CTAAATCTGGCTCCT 100 33
HF553_RS10010 2079810 .. 2079837 -  -6.2  -5.05782   ATGGATGTCAAAAAA        CCCGGCAAACCT TATC AGATCAACCGGG         TAAAGATAATTTCTT  83 90
HF553_RS09995 2077943 .. 2077955 -  -2.7  -4.35524   GTGCCAAAGCCAAAA                TATCA GTA CGATA                ACCAACTCAATACGA  60 202
HF553_RS09980 2074892 .. 2074904 -  -6.3  -4.06502   TATCCTCAAAGGAAA                GTTTC TTG GAAAC                GATTAATCGCGCATC  65 270
HF553_RS09960 2071585 .. 2071638 - -16.1  -3.75332   ACCGTTGAAGCTAAA CCGGC-TCTCCCGATCTTCTGTCAGC TTT GCTGGCGGAAGATCGGGAGAAGACAA GCGAAGCGCGGCAGA 100 478
HF553_RS09935 2066883 .. 2066896 -  -2.3  -3.36273   CGGGGCGAATATTAA               CGAGG TGCC CCTGG                CTTGTCAAAGCCTGT  45 127
HF553_RS09930 2066691 .. 2066718 -   -12  -5.14965   ATGGGTATCAAAAAA        CCCGGTAAACCT TATC AGGTCAACCGGG         TAAAGATAAGTTCTT 100 89
        pduA NONE
        pduB NONE
        pduC NONE
        pduD 2042550 .. 2042560 -  -8.2  -3.73224   TTATCCTTTATCAAA                 GCGC CAC GCGC                 AGTTCCTGCGGGTTT  71 10
        pduE NONE
        pduG NONE
        pduH NONE
        pduJ NONE
        pduK NONE
HF553_RS09765 NONE
        pduM NONE
        pduN NONE
        pduO NONE
        pduP NONE
        pduQ NONE
        pduS NONE
        pduT NONE
        pduU NONE
        pduV NONE
        pduW NONE
        pduX 2029071 .. 2029087 -    -3  -4.30576   TCGCCAGCATGAAAA             GCGA-CT ATGA AGATCGC              GTTGATGACTACATC  62 170
        sopA 2018882 .. 2018901 - -12.2  -2.91264   GGGTCTATTTACAGA            GGGACACA ACGC TGTGTCCC             TTAATTCCATGCGGG  80 52
        sbcB 2017023 .. 2017041 -   -16   -4.4261   TCGGCAATAGTAAAA             CCGGAGGC AGT GCCTCCGG             TTTTTTGTCTGTCAT 100 115
        hisL 2013263 .. 2013289 - -22.4  -5.75342   GCGCGCCAAAAAAAA         GCCCCCGGAAGA TGA TCTTCCGGGGGC         TTTCTCATGCGTTCA 100 66
        hisG NONE
        hisD NONE
        hisC NONE
        hisB 2008750 .. 2008764 -    -5  -2.71011   AGCCGGTGTCAAGGA               TGACGA CGT TCATCA               CAGCACTCCTTTCGA  49 23
        hisH NONE
        hisA NONE
        hisF NONE
HF553_RS09595 2006046 .. 2006060 - -12.8  -5.60993   TTTCTCATAAAAAAA               CCGGGC ATT GCCCGG               TTTTTTTACGCTTAT 100 37
HF553_RS09390 1957842 .. 1957882 - -11.9  -2.71791   AGTTTTTGGCCAAAG GGCAGAGCCGGATGGCAAG GCTAA CGCGCC-TCCGGC-CTGCC TGGTAAGCAGGCCGG  79 57
HF553_RS09370 1951041 .. 1951058 -  -4.8  -4.07687   ACGCTGGCGGGAAAA             CTGGCGC TCGCC GCGCC-G             CCGGATATTGAGCAG  62 266
        yegD 1948780 .. 1948799 - -11.4  -3.71649   CGCTGAAACGGGAAA            GCCCCTCC CGAG GAAGGGGC             CAAAATAAGGAAAGG  91 202
        mdtA 1947288 .. 1947298 -  -6.8  -3.08679   TGCCCGGAGGTAATA                 CCTG CAT CAGG                 CGCGCGCTCCTTTTT  58 21
        mdtB 1944166 .. 1944177 -  -3.6  -4.66264   GAAAAGGGCGAAAAA                GCGC ATCT ACGC                 CTCCTCTTTATGGCG  66 20
        mdtC NONE
HF553_RS09335 NONE
        baeS NONE
        baeR 1937161 .. 1937174 -  -5.3  -4.98857   ATCCAACGATAAAAA               TGGTT GCTT AACCA                GCGCTGGATAATTTC  77 411
HF553_RS09315 NONE
HF553_RS09310 NONE
HF553_RS09305 1932024 .. 1932034 -  -2.6  -3.50047   CTTACAAATTGATAA                 TTTA TAA TAAA                 ATTGGAGAGTCTGAT  47 519
HF553_RS09220 1920647 .. 1920672 - -13.4  -4.65666   ATACGCAAAAAATAA         GCCTGCGTAA GGGAGA TTACGCAGGC          CAAGGAGGTGGTTCC 100 162
HF553_RS09215 1918834 .. 1918847 -  -2.4  -4.12532   TGGCTTATATAGAAA               CTCT TTAAAT AGAG                TATGGGGTGTTATGT  55 489
        yegS 1916901 .. 1916922 - -11.6  -4.78572   GTTCAACGAAGAAAA           GCCGGATG TGAGCG CATCCGGC            CAGCGACAGGTGTTA 100 41
HF553_RS09190 NONE
HF553_RS09185 NONE
HF553_RS09180 1912261 .. 1912310 -  -8.6  -3.62864   CAAATGGATGGTAAA GTGCCGGTGCTGGTGATTAAGCA GGTGG CGCTCGATCAGCAGCAGCGGC-C TATTGAATACAGCAT  68 60
        rcnB 1909253 .. 1909273 - -11.2  -2.76225   AATCAATGCTAAGCA            CACTCTCC TTAAC GGAGAGTG            TGCTTTTTTATCGAT  77 33
        metG 1900299 .. 1900316 - -12.7  -5.03145   TAAGCGGTTAAAAAA             GCCGGAG CATG CTCCGGC              TTGTTGCTTATTTCA 100 33
HF553_RS09120 1899562 .. 1899581 - -11.4  -5.01553   AATTCATAAAGAAAA            GACGCTGC CGAA GCAGCGCC             CTGAGCGACTTTACC 100 69
HF553_RS09115 1898614 .. 1898629 -    -4  -3.37685   AAAACGCGGTAAAGA              TG-AGGC GGC GCCTGCA              TTGACGGCGGAACGT  49 319
        mlrA NONE
HF553_RS09090 1894666 .. 1894679 -  -2.4  -2.50016   GGTGATTATCAATAT               TGGT ACGGCG ACCA                TCGCTTCAACGGTGG  38 176
         dld 1886512 .. 1886528 -  -6.5   -5.2197   TATAAAAAGCAAAAA              GCCGC GCAAATG GCGGC              AGCCAGCGCCAGCGC  91 126
HF553_RS09045 1884096 .. 1884139 -  -5.8  -4.46233   TCAACGCCAAATAAA CGCCGGGGGCCGGATGGC GGCGTTAT GCCATCCGGATACCATCG GGTTTAACGGGCCTC  72 29
        yohP 1881391 .. 1881427 - -10.8  -3.30771   CTACAGCGTCCAGAA   CGTGTGCCGGGCAGACA TTAT CG-CTGCCCGGCGCAAG    AATCAGAAAATCATC  80 28
HF553_RS08995 1874211 .. 1874221 -  -2.6  -3.55714   AGATTCATCATACAA                 TTAA ACG TTAA                 AACGTGCTACCGATC  48 110
HF553_RS08990 NONE
HF553_RS08985 1872959 .. 1872971 -  -7.7  -3.22106   AACAATGTAATGGAA                CCGTA GTT TACGG                GCCTGCTATGTCTTA  64 138
         cdd 1872014 .. 1872027 -  -8.1  -3.30243   AGTCAGGCCGGATAA               GACGC CAGT GCGTC                GCTATCCGGCACATT  65 44
        sanA NONE
HF553_RS08970 1870741 .. 1870753 -  -2.6  -3.70505   TAAATTAAGGCGAAA                CGCA AATAA CGCG                TTTTAATGATCCAAA  50 180
HF553_RS08965 NONE
        preA 1868192 .. 1868218 -   -13  -3.54475   TTGCTTATCAGATAA        CCCGGCGCAGC GAAACT GC-GCGCCGGG         CTTCATACCGTGAGC 100 40
        fghA 1859775 .. 1859787 -  -9.1  -2.74012   GGAGGAGGTGAATTA                CAGCG CGG CGCTG                GAAAATTCATTATGT  66 35
        serB 1856953 .. 1856964 -    -3  -2.59431   TCGCGTTATAATTCA                TCTT CAAT AAGA                 AAAAGAAGCAATTCG  40 4
HF553_RS08905 1855551 .. 1855583 - -19.2  -2.98823   CGTTTCTGACAGAGA      CTGGCGACAGCCGC GTTTT GCCGCTGTCGCCAG      AATGTTATAACCGAT 100 30
HF553_RS08885 1849476 .. 1849488 -  -4.1  -3.21218   ACGGTTCATTACGAA                CGCTA TGA TAACG                GGTTAACAGGCGTGA  48 52
         nfo 1848523 .. 1848560 - -12.9   -3.6944   GGCGTAAGAGAAACA   CGCTAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTATTG    CCTGAAGAACATTGA 100 44
        setB 1842898 .. 1842918 -  -2.6  -4.83615   TAGCGTGCATAAAAA            TATGTTAC AAACG GAAACATA            TGCAAAGCTATCATT  72 298
        yeiP 1840759 .. 1840787 -  -7.4  -2.77779   TCAATAAAGAAAAGG       GTCAGACTGCGCC CTGG GGCGCAGCC-GAA        AAATGTGAAACTTAA  58 37
HF553_RS08835 NONE
HF553_RS08830 1838801 .. 1838836 - -13.6  -4.02456   AAATATCATCATAAA    TTACCTTCAACGAT-GT AAA ACTATCGCTGAAGGTAA    TGTTAATTACATAGG 100 41
        mepS 1837797 .. 1837814 - -11.3  -4.59414   GGATAATAAGCAAAA             GCACTGC CGAA GCAGTGC              TTTTTATGTCGTCTC 100 77
HF553_RS08820 1835942 .. 1835954 -  -3.3  -2.96444   TCGCTGAATAATAAG                TGACG TTG CGTCT                GATGTGAATCCGTTA  44 55
HF553_RS08815 NONE
HF553_RS08810 NONE
HF553_RS08805 NONE
        yejF 1830102 .. 1830115 -  -4.5  -4.09864   ACCGATTCCGCAAAA               CGG-GC AGA GCACCG               AGAATAGTCTGGTGG  62 262
HF553_RS08780 1825683 .. 1825712 -  -4.9  -3.61517   ATCTCTCTTTAATAA       TTCCTGCTACAGG CGAC CCAGCAACAGGTA        AGTGATCTGCTTTGC  57 101
        rplY 1825341 .. 1825356 - -11.8  -5.68039   AAACGCATAAAAAAA              CCCCGC CGGG GCGGGG               TTTTTCTTCAACTTC 100 48
HF553_RS08760 NONE
        pbgA NONE
HF553_RS08750 1821187 .. 1821208 - -10.9  -5.95946   CGAACAATAAAAAAA           CAGCGAGTC TTAC AACTCGCTG            TTTTTGTGGGGTTTA 100 83
HF553_RS08745 1820307 .. 1820325 -  -4.6   -4.0371   TAGCTGCGACAGAAA             TCTACTTA GCC TATGTAGA             TCATAGCAAACAACG  61 336
HF553_RS08725 1813550 .. 1813562 -  -3.3  -3.92075   ATTGTTAGCGACAAA                GGCGT GGT AGGCC                GTTTACCTTACCAGA  55 73
        narP 1811167 .. 1811177 -  -8.2  -4.62069   TCTGGACCCGAAAAA                 CCGC GAT GCGG                 CGCTGGGCTACGCGG  87 326
         eco 1797822 .. 1797832 -  -8.2  -5.49809   GAAAGGGCAAAAAAA                 GCGC ATT GCGC                 TGCTGCTGGCGCTGG 100 468
        rcsD NONE
        rcsB 1788118 .. 1788146 -  -6.6  -5.24129   CGCGGGCATAAAAAA       TGCCGGA-TGGCG GCGT CGCCTGTCCGGCC        TGTAAAAGATGAGTC  87 95
HF553_RS08565 NONE
HF553_RS08560 1776950 .. 1776960 -    -4  -6.24157   ATTCATAAAAAAAAA                 TCAA AAT TTGA                 TCGAATGCTGATTTC 100 105
        nrdA 1774377 .. 1774394 -  -3.4  -2.71144   TAGGCCGGGTAAGCA             TAGCGC TACCCG GCACTA              TTCATCAGATCTTAC  43 30
        nrdB NONE
        yfaE 1772428 .. 1772439 -  -5.8  -3.06183   GTGAGCTGGATTTAA                TGGC GGCG GCCA                 GTAATTTCCTGCTGT  52 488
HF553_RS08535 1770577 .. 1770613 -  -9.4  -2.54523   CCATAGTCGAAGTGA   CGCGCCGGATGAGGGCA TAAA CGCC-TCATCCGGCCTG    GCGCAACGTTTGCCA  68 82
        glpA NONE
        glpB NONE
        glpC 1763756 .. 1763776 - -18.3  -3.07043   GTGAGTAGGGTAATA            GCGCCGGAG GGG CTCCGGCGC            TTTTTACTTAGCCGA 100 33
        sseL 1761975 .. 1761999 -  -3.4  -3.53563   AGACGCTGGCGCAAA          CGGCGCACTG GACGA CAGAACGACG          CAGCAATCATTATGC  49 362
        nudI 1759668 .. 1759687 -  -9.3  -3.76413   TGTTAAAAGCGTAAA            GACAGCC TGAAGC GGCTGTC             GTCATTATAATAACC  77 30
        arnB NONE
        arnC NONE
        arnA NONE
HF553_RS08465 NONE
        arnT NONE
        arnE NONE
        arnF 1750978 .. 1751001 -  -2.3  -4.78149   GTCAGAACTGAAAAA          CGGAGGGAT TAAAAT ATCTCGCCG           TGCGCTCCAGCAGTG  68 415
         rbn NONE
HF553_RS08395 1740948 .. 1740965 - -11.3   -5.1971   AGTAAAAACGAAAAA             CCCGCTT CACG AAGCGGG              TTTTTTATTACCTGA 100 127
        alaA 1722013 .. 1722036 -   -14  -3.21062   GAGATGAAGATGCAA          TTCAGGCTAC CGAA GTAGCCTGAA           TTTAAGATTATTGAT  93 33
        yfbR 1721261 .. 1721288 - -10.6   -4.2828   CCCCAGGCAGGAAAA        GGCCTGAT-GGCG CTG CGCTTATCAGGCC        TACGGGTATCACGCT  88 88
        ackA 1716067 .. 1716094 - -16.4  -4.37886   GGACGGGTTACAAAA        CAGCACCGCCAGC GAG GCTGGCGGTG-TG        AAATCAGGCAGTCAG 100 29
         pta 1713841 .. 1713852 -  -7.2  -3.30124   CTGTAGGCCGGACAA                GGCG TTCA CGCC                 GCCATCCGGCATTAG  63 50
        yfcC 1711882 .. 1711898 -  -5.7  -5.03715   ACTACGCGGAAAAAA              CGCGGCG TAT CGTCACG              TGTGAAAACCACAGC  84 266
HF553_RS08245 1706792 .. 1706806 -  -6.4  -4.66833   CCGCAACGCCAAAAA               CGAAGC CGC GCTTCA               GGAGAAACCGGAAGA  78 56
        yfcG 1704058 .. 1704074 -  -5.1   -2.6381   AGAATCTGCATATGA              CCTCC AGAGTAG GGAGG              ATTTCCTCTTCCCTA  48 130
HF553_RS08220 1703114 .. 1703139 -  -8.9  -4.54026   GCTGAAATAAAAGAA         GCCCGGC-GGCG CAT CGCTTACCGGGC         AGGATACGGCGCTTT  88 46
HF553_RS08165 1690898 .. 1690913 -  -3.2  -3.48474   GAAATGCATAACGAA              GGCTAA TGGC TTTGCC               AGCGGCGCGATGCCG  50 51
         flk 1680455 .. 1680476 - -14.5  -3.54424   GTGGAGGTTGTGAAA           CGCGTACCT GCAC AGGTACGCG            GTACGGCGCTCGGCG  95 192
HF553_RS08095 1677766 .. 1677781 -  -2.6  -3.42256   AGCGACGGAATAAGA              GCCTGAT GAA AT-AGGC              GCTTTAACCTCTCCG  46 74
        mnmC 1673497 .. 1673532 -  -6.9  -4.60924   CAAAGTCTGGAAAAA   GCGATCGGCGCCGGCGA ACTG TCGCCG-CGC-GATCAG    GCGTTAGTCAAAGCG  78 128
        smrB 1668289 .. 1668300 -  -7.2  -3.30124   TCGTAGGCTGGATAA                GGCG CTTG CGCC                 GCCATCCGGCAATTC  63 45
        fadL 1661886 .. 1661904 - -10.3  -5.33405   GGCAGTAAATAAAAA             GGTGAGC GCAAT GCTCACC             TTTTTGATCCGTCTC 100 50
HF553_RS08010 NONE
HF553_RS08005 1659726 .. 1659742 -  -4.3  -4.09243   GAGAGGTGGGTAAAA              GAGGTCA TGG TGTCCCC              TGCAGGAATCGAACC  61 16
HF553_RS07990 NONE
HF553_RS07985 NONE
HF553_RS07980 1654798 .. 1654812 -  -4.2  -3.54183   GGGCATGAGAAAAAT               GCTCCT AAA ACGAGC               TCAAACTCCCACAAT  52 472
        pgtP 1646267 .. 1646285 - -14.6  -3.11072   GTCAGTGAATAGATA             GCGCCGAT AAT ATCGGCGC             TTCTGTTCCCCGGGA  89 52
        lpxP 1644373 .. 1644384 -  -7.2  -5.22137   AATGACAAAATAAAA                GGCC TTGC GGCC                 TTTTTCAGATGTAGA  91 30
        ypdK 1643875 .. 1643894 - -13.6  -4.28487   GAGTAGAAAAGCAAA            CAGGAGCC CCAT GGCTCCTG             TTTTTCTTTGCATTG 100 43
HF553_RS07905 1637894 .. 1637949 -  -9.1  -3.61398   CCTGCTGCTCAACAA TGACGGCTATACCG-TAGAGCGCGCCA TTCA CGGCGCGGCCCAGCGGTATAAC-GACA TCGCGAGCTGGAACT  68 263
        mgrA 1635343 .. 1635354 -  -3.6  -4.07885   CATTTTTTGCTAAAA                CCGG CCCT CCAG                 AATAGCGTCAATTTC  57 8
HF553_RS07890 1634848 .. 1634883 -  -7.7  -3.74227   ATAAAGACAGAAAGA   TAGCAGGCCCGATG-CG TGGG CGTCATCGGGC-TGTTA    TTCAGCAGGAGGCTT  71 39
        nupC 1632012 .. 1632029 - -12.7  -5.61596   AGCGGCATAAAAAAA             CCGGGGA TAGC TCCCCGG              TTTCTACATTAAACG 100 46
HF553_RS07860 NONE
HF553_RS07855 1628410 .. 1628438 - -13.3  -3.82946   CCAGCTGAAATAGAA        TAAACGGCAGG GCAGACG CCTGCCGTTTA        TTATTTGTTAGTCCG 100 33
HF553_RS07845 NONE
HF553_RS07840 NONE
HF553_RS07835 NONE
HF553_RS07830 1626300 .. 1626314 -  -8.5  -5.24989   GCAGATAGCAAAAAA               GCGCC TTTAG GGCGC               TTTTTTACATTGGTG  95 36
HF553_RS07805 1621748 .. 1621762 -  -4.9  -3.37522   AGGCCAGCGAATTAA               CCGCC GCGAG GGCGA               AAGATCCGCTGTATC  54 110
HF553_RS07795 1619525 .. 1619539 -  -7.1  -3.18383   ACCGTGATTGATGAA               GCGGA AATGA TCCGC               TTACTGGGTGCCTGA  62 257
        cysZ 1615423 .. 1615435 -  -5.5  -3.53012   CTGTCCGTGTCCAAA                CTGGC TGC GCCAA                TAACGCCTGGTGGGA  57 78
        cysK 1614100 .. 1614115 -  -6.8  -5.26316   GCAGGCCACAAAAAA              GCACCC AAAA AGGTGC               TTTTTTACGCGTTTT  87 54
        ptsH 1613487 .. 1613514 -    -2  -4.11692   GACTGATTTTTAAAA        GAACCCG-GAAAA AAA CTTACTCGAGTTC        CGCCATCAGTTTGAC  55 14
        ptsI NONE
         crr 1611140 .. 1611157 - -12.7   -5.1287   CCTACAGGCAAAAAA             TGGCGCC CAAA GGCGCCA              TTCTTCACTGCGGCA 100 45
        ptsJ NONE
HF553_RS07735 NONE
HF553_RS07730 1607337 .. 1607363 -  -8.8   -3.6682   GGGCAGGGATTTAAA        CGAGGTGCCAT CGTCGT ATGGCACC-CG         TGTGTTATAGCGTTT  72 30
        amiA NONE
        hemF 1596565 .. 1596588 -  -4.5  -4.57569   TTATTTGCCGAAAAA          CCGTCGTTG ACGCTG CATCAACGG           ATGCGGCAATGGGCT  69 242
         tal NONE
         tkt 1575817 .. 1575855 - -15.5  -2.63901   AGTCTACGAAGTAAT   TTTGCACAGCCTACAGA ACAGG TCTGCAGACTGCGCAAA   GTCTGTGTTGCTAAC  93 48
       pbp4b 1571923 .. 1571936 -  -8.1  -3.04144   GGTCGACGTTTAACA               GGCCT GATG AGGCC                AATCTTAGTATTGAA  62 301
        narQ 1567881 .. 1567894 -  -3.7  -3.57561   TGCCAACGCCGGAAA               GCCTG ACAT CTGGC                CTTCCGGCGATTTGC  53 47
        acrD 1564557 .. 1564577 -    -9  -4.78237   TAGGGGATAAGAAAA            GGCGACTC AACGA AAGTCGCC            TTTTTTGTGCCCGGC  90 66
HF553_RS07525 NONE
        dapE 1562552 .. 1562569 -  -7.7  -2.55351   TCCTCTTACAGGAAC             GCTCATC AGGC GACGAGC              TGTTCCATAATGCGT  59 13
HF553_RS07515 1561898 .. 1561912 -  -5.6  -4.09864   AGCGACGCGGGAAAA               CGGCTG GCG CAGCAG               GAACACCGACGTTTG  65 442
HF553_RS07485 NONE
         bcp 1554811 .. 1554829 - -11.6  -3.16683   ACGTGAGGTGATTAA             CGCTCCCG GCG CGGGCGCG             GCAGGTGGAATGGGC  74 465
        bepA NONE
        arsC 1548116 .. 1548131 - -11.8  -3.12668   CCTGAAACTGTAATA              CGCCGC GACG GCGGCG               TTTAACGGTTAACCG  81 34
        purM NONE
        purN 1543225 .. 1543243 -  -4.6  -2.94099   CTGTTCGATGACATA             TTATTCGT CAG ACGCATAA             CCTTGCGGCGGCAGA  48 7
        ppk1 NONE
         ppx 1539394 .. 1539412 -   -16  -2.68279   GATTCAGTAAAGGCA             GACGCCGC AGC GCGGCGTC             TGATCCACAATTTAC 100 37
HF553_RS07400 1536443 .. 1536456 -  -5.3  -5.10526   ATACTAAAAAACAAA               GCATT AGAT AATGC                GATGCTTTGTTTTTA  79 140
HF553_RS07395 NONE
HF553_RS07390 1535211 .. 1535228 -  -9.1   -4.1523   GCGACCAGACAGAAA             CCTCCGC TCAC GCAGAGG              TTTTTTACTGGTCAT  80 56
        leuE 1533860 .. 1533873 -  -9.5  -5.57054   AAGAACGTAAAAAAA               CCGCC GTGA GGCGG                TTTAGTTGTTCAGTT 100 39
        xseA 1528765 .. 1528787 - -12.7  -4.57474   GTAAGTTAGACAAAA          CCGGGC-GGG TATT CCCAGCCCGG           TTTTGAGTCTAATGA 100 153
        sseA 1483675 .. 1483687 -  -3.3   -2.5547   ATGGCGGATATTAAG                CGGGT TCA ACCGG                TAAATCGGTACGCGC  42 8
HF553_RS07250 1482639 .. 1482654 - -10.4  -5.67967   ACCAGCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGGCCTG 100 126
        suhB 1472260 .. 1472285 - -16.9  -2.74784   ACGCCTGAAAAGGCA         CGGCGGATGAG TGGC CCCATCCGCCG          AAGAGACTTAGCGCT 100 33
HF553_RS07185 1470988 .. 1471012 -  -9.1  -4.57569   TCAGTGTCGGAAAAA          CGCCCGCCGCG AAA CTCTGCGGACG          GGGCAAACACGCGCC  88 283
        asrB NONE
        asrC 1467726 .. 1467749 -  -2.4  -4.82901   GGCGGGCCATAAAAA          GGTTACGC-GC GCT GCTACGTAAAC          CTGTCTTTATCGCTT  68 475
        csiE 1464822 .. 1464840 -    -3  -4.72272   TGCCCTGAGTAAAAA             GCTATTCC GCC GGTTTAGC             GCCCGCGACTTGCTG  70 365
        hmpA 1460897 .. 1460933 - -16.1  -3.53224   CACCTGGCCCTGAAA    TACAAAACGCCCGATGA TGT TCATCAGGCGTTTTACA    GACAAAAAACTGTCA 100 174
        cadC 1457934 .. 1457969 - -12.8  -3.13403   TCTTTGCGATGAATA    TGTTGCCAAAATTAAC ATAA GCTATTTTTGGCAACA     TGTTTTTCACAAAAT  86 97
        cadB 1456285 .. 1456299 -  -2.7  -3.53012   CTTGTTCCTGGTAAA               GTGGG CCCCT CCCGC               TACGCTATAGCAGGT  48 75
        cadA 1454092 .. 1454113 - -14.5  -5.00616   TGCTGCGTGAAAAAA           GGGAAGTGG CAAG CCACTTCCC            TTTGGTACTTATTTC 100 34
        dtpD 1452540 .. 1452550 -  -2.4  -3.62597   CGTACTGGCGAAGAA                 GACG ACG CGGC                 TATCTGATGTGCCGA  49 81
HF553_RS07085 NONE
        mltF 1442037 .. 1442049 - -10.5  -4.65895   CGCGCGATGCAAAAA                CCGGC GCG GCCGG                ATCGCTAATTGATGT  95 251
HF553_RS07055 1437744 .. 1437784 -  -4.9  -4.22591   AAGAAGCGCAATAAA CTTGA--TGGCTCTTCTGC ATGAG GCGGAAGAGCCATTTCAAA CCAGTTTTTTTACCA  65 21
HF553_RS07040 NONE
HF553_RS07035 1434033 .. 1434044 -  -3.6  -4.10161   GATGAGCTGGGAAAA                CCAC GTTT GCGG                 CTGTGGGGCGAGGCG  60 248
        nadB 1422317 .. 1422347 -  -7.4  -3.21099   CCGCCTTATTACGAA       CCCGGTGTGGAATG CGC CACGCCGCAGCGGG       AGCAGGCGCGTTACA  59 336
        srmB 1420444 .. 1420465 - -14.5  -5.80817   TGGAAGATAAAAAAA           TGCCGGGTT AACG AACCCGGCA            TTATTATTACTCTTC 100 32
        eamB 1418824 .. 1418848 - -14.3  -3.94877   ATCCGGTAATAACAA          GCGGAAGAGGC CGG GCCTTTTCCGC          TTTTGTTTTATTTGG 100 42
         ung 1417364 .. 1417377 -  -9.5  -3.48276   CGCCCGGTCAGACAA               GGCGC TTTC GCGCC                GTTATCCGGGCGATA  75 60
        trxC 1415609 .. 1415629 - -14.7  -4.16943   TGGCAGAGGTGAAAA            CGGGGCACA AGA TGCGCCCCG            TGGTGTTTACAGCGC 100 32
HF553_RS06925 NONE
         pat 1412114 .. 1412138 -  -2.1  -2.74269   TGCAGACGACATAAG          CGAGCAATAAT AAC ATCAGTACCCG          TTAAAGTGGTCAACA  40 56
        pssA 1410676 .. 1410692 -  -9.4  -4.66938   ACTCCTAAGAGAAAA              CCCCGT ACAGG ACGGGG              CTTCGATTACAGGAT  91 32
HF553_RS06910 1410120 .. 1410133 -  -3.8  -2.74144   GCGGGATCCTGAAAG               CGGA GATGTT TCCG                GCGCAGGTTCGCGCC  43 223
        bamD 1397120 .. 1397139 -   -15   -5.8187   TATCGAATAAAAAAA            CGGCAGCC GGAA GGCTGCCG             TTTTGCTTGTTGGTA 100 46
        raiA 1396509 .. 1396524 - -11.8  -4.92385   TACAGTGAAATAAAA              CGCGCC CGAA GGCGCG               TTGGCGATACACTCA 100 51
HF553_RS06850 1395978 .. 1395994 -  -9.4   -5.4492   TACAGATACAAAAAA              GCCCCA GAGAA TGGGGC              TATTGCTGCGTTTAC 100 37
HF553_RS06740 NONE
HF553_RS06735 NONE
HF553_RS06730 1374584 .. 1374601 - -12.7  -5.76237   GAGAGAAATAAAAAA             GGCACCG TGTG CGGTGCC              ATGTGTTATGCGGCC 100 31
HF553_RS06700 1369983 .. 1369994 -  -5.8  -3.57013   AAAACAGACAATTAA                CCAG CCTT CTGG                 GCGGAGTGGGATGAT  59 10
HF553_RS06695 1368819 .. 1368834 -    -6   -5.4505   CCTGTCAACAAAAAA              CGCGCC CGAA GGTGCG               ATTGAAATGCTTGTT  91 111
HF553_RS06690 1368640 .. 1368660 -   -14   -5.5112   GTTATCAATAAAAAA            GGCCTCCC GGTGG GGGAGGCC            TTCTTGTTCGTCTTC 100 49
        pheA 1367263 .. 1367279 - -12.3   -3.0497   AGAGCAGCTGGAAGA              GTACCGG TTG CCGGTAC              GTTGTCCGACGATGG  76 195
HF553_RS06665 NONE
        dgcN 1362035 .. 1362057 -  -6.8  -4.30995   GCTTGTAGAAAAGAA           GGGGCTGGCA TTA CGCTGGCCCC           TTTTTTATGGGGTGC  74 118
HF553_RS06630 NONE
HF553_RS06625 1356017 .. 1356034 - -11.3    -5.252   GACGGCGATAAAAAA             GGCGAAC CGGA GTTCGCC              ATTGTGTTACTCCGC 100 32
HF553_RS06620 1354820 .. 1354862 -  -2.7  -5.14563   CGCGCGATGAAAAAA TTGCGAATCTGGAAGTTCAG CTTG CAGAAGC-CCAGACTCGCGA ACGCGACACCGTGTT  79 478
        nadK 1353642 .. 1353670 -  -3.3  -3.92178   ATGACTGTAATTAAA        TACAGTATAAA CTGGTTT TTTATACAGTA        AAGAGGCTAACGTAA  55 43
        recN NONE
        bamE 1351154 .. 1351165 -  -4.4  -4.85782   CTGGCGAAAAATAAA                GTAG GTAT CTAC                 AGTCGTCCGGTAAAA  77 314
        smpB 1349858 .. 1349886 - -13.3  -2.53613   ATGAGATATGAACAT        TGACCAGCTTC ATACTGA GAAGCTGGTCA        CAAAAAATGTCTATT  84 39
        bapA 1337815 .. 1337832 -  -2.5  -3.14132   GGGCTTTTTTATCAA             CCGCCGG TTAT CAGGTGG              TTGTTCTGCAACAGA  45 4
HF553_RS06575 NONE
HF553_RS06570 NONE
HF553_RS06565 NONE
        ssrA 1332482 .. 1332507 - -12.5  -5.47431   TGAAGACATAAAAAA         GCCCGCAGAGC TTGT GCCATGCGGGC          TTTCAGGATTTCATC 100 73
HF553_RS06555 1332120 .. 1332131 -  -5.8  -4.33248   GAACTCGACAATAAA                GCGA CTCA TCGC                 CAGTCACCAATTCTG  70 29
         hin 1322155 .. 1322168 -  -2.4  -3.66908   GTTCTTGAAAACCAA               GGTT TTTGAT AACC                AATGTTATGCCAGGC  49 358
        iroB 1320371 .. 1320402 -  -2.3  -2.97021   CGGTGAAAGATGAGA      TATGGCGAC-ACAC GCTGG GTTCAGCCGCCATA      TTGTCATTGCGCTGC  41 46
        iroC 1316628 .. 1316650 - -13.5  -3.77831   GTACTAATAGCTAAA           GCGGCTGTT ACAGG AACAGCCGC           TTGCGGGCTTTCTTT 100 64
HF553_RS06495 NONE
HF553_RS06490 1314093 .. 1314108 -  -3.2  -4.87291   TACGGCAAGCAAAAA              CCGC GAACACAT GCGG               AGTCGCGTAGTGAAG  74 285
HF553_RS06470 1308568 .. 1308585 -  -4.1  -3.40558   TACAGATTTCAAAGA             GCT-CCGC TGA ACGGTAGC             AGGATCTGCACATCC  50 56
HF553_RS06465 1307388 .. 1307417 - -10.8  -4.75372   AGGATTTATGAAAAA       CCTGGGCGTAAA AACATA TTTACGTCCAGG        CTTTCTTTTTAGCAA  95 34
HF553_RS06445 NONE
HF553_RS06440 NONE
HF553_RS06435 NONE
        csiD NONE
        lhgO NONE
        gabD NONE
        gabT 1295000 .. 1295011 -  -2.2  -3.30124   TTGTAGGCCGGATAA                GACA GTTA CGTC                 GCCATCCGACGCTGC  45 51
        gabP 1293483 .. 1293504 - -10.1  -2.57931   TTTACTCCTGAGAAG           CTTCCCGGC TGAC GCCGGGAAT            AACTAACGTAGGTTT  70 28
        csiR 1292429 .. 1292440 -  -7.2  -4.93288   AACATTTAAATAAAA                CGGG AATA CCCG                 ACGCTGACAAAGTGA  91 373
HF553_RS06390 NONE
HF553_RS06385 NONE
HF553_RS06380 1290535 .. 1290559 -  -3.5  -3.18912   CCATGGATTCAGCAA          TGCCGCGTTCT GCT AAAAAGCGCCA          GCCGCGTCCGGCAAA  47 248
        alaE 1289111 .. 1289135 - -15.7  -4.35675   AAAAAGCGACTAAAA          GCGCGACTGGC AAT GCCAGTCGCGA          CGTTAACTTATGCCT 100 33
HF553_RS06360 NONE
HF553_RS06350 1286090 .. 1286109 -  -6.3  -4.67635   TTTAAAATGAGAAAA            CGGCGCG ATGAAA CGCGTCG             GATTGTCGGGTGTTG  78 248
        nrdH NONE
        nrdI NONE
        nrdE NONE
        nrdF 1282180 .. 1282208 -    -9   -4.8269   GACAACCAGCAAAAA        TCCACCTGAATT GGAGG AATCCAGGTGAA        TAATGTCACTCGTAT  90 138
        proV NONE
        proW NONE
        proX 1278501 .. 1278519 -  -3.2  -3.51924   TCGTGATTTAGATAA             TTATTTCC TGG GAAAACAA             TCATAGCGGATGTTG  50 148
HF553_RS06310 1276856 .. 1276870 -  -5.8  -4.29621   GACAAATAAAGTAAA               TGTATT ATT AATACA               AAATCATTCTTTCAG  67 448
        mprA 1276195 .. 1276218 -  -7.4  -3.85817   ACCTGTTGTCAGAAA          GGCCAGCA GTAATGCG TGCCGGCC           TGTCCGCTTTCCTGT  68 73
        emrA NONE
        emrB 1273383 .. 1273398 -    -9  -5.14563   TGGTCTACTAAAAAA              GGGATC CGCA GATCCC               TTTTATCAGATAGTT  93 39
        srlA NONE
HF553_RS06205 NONE
        srlB NONE
        srlD 1257044 .. 1257065 -    -3  -2.52896   CCATCCGGCAATTCA           CGGTCA GAACATCACT TGACCG            CCGGTTACGTTGATC  40 7
        gutM NONE
        srlR NONE
        gutQ 1254604 .. 1254615 -  -5.8  -3.68416   GCAAAATAATCATAA                CTGG GCGG CCAG                 CGCGCGGGCGCTGGA  60 92
        norV NONE
        norW 1250378 .. 1250390 -  -4.7  -3.30124   TCGTAGGCCGGATAA                GACGC GAA GCGGC                GCCATCCGGCATCAC  52 45
        hypA NONE
        hypB NONE
        hypC NONE
        hypD NONE
        hypE 1234478 .. 1234489 -  -7.2  -2.99325   GCCTGATAAGCAAAG                CGCC ATCA GGCG                 TTCATGCAGCGTTAA  60 99
        flhA 1232022 .. 1232062 -  -9.6  -4.72272   TTTGGCGAGGAAAAA  CCCGCCTGTAAGCAGTGC CCGGT GCACTGCTATCAGCCGGC  TAAACGCGAGGAGAT  95 229
        sitA NONE
        sitB NONE
        sitC NONE
        sitD 1227779 .. 1227795 -  -3.7  -5.03145   GAACTGGCGAAAAAA              TTTGGTC TGG GAACAAA              AACCGTCAGTATTTA  77 477
        hilD 1219858 .. 1219890 - -11.3  -4.81163   TAAATATGAATAAAA      TGCCGGCCTTAATCC ACA GGGTTAAAGCCGGAA      GGAGATAGTGTCATC 100 296
        hilA NONE
        iagB 1216866 .. 1216899 - -12.7  -4.05669   AAGCTGATAAAAACA     TAGCTTACTTTTAGA ACTA TCTGAAAGTAAGCTA      TTTCTGTATAATTAT 100 37
        invH 1193926 .. 1193943 -    -7  -6.02919   TCACAAATAAAAAAA             GCAGCA GCGAGG TGCTGC              TGTATCAAAAAGCAG 100 179
HF553_RS05870 NONE
HF553_RS05865 1192780 .. 1192796 -  -2.3  -3.63054   GAAAGGTAGATACAA              CACATTA TTT TAATTTG              AAAAGTATATGAAAT  49 114
HF553_RS05850 NONE
HF553_RS05845 NONE
        pphB 1189460 .. 1189475 -  -3.2  -4.89519   AGAATACAAAATAAA              GTAACG CTAT CGTTGC               GTATATTATATAATT  72 52
        mutS 1184286 .. 1184318 -    -7  -3.84825   GTCATTTACACGAAA     CGACAGCCACAGCCT GAAA AGCCTGTG-CTGGCG      CGTGGGCCCGATAAC  66 65
HF553_RS05795 1181656 .. 1181671 -  -6.1   -3.2827   GTAGTTAAGGATTAA              GACGG TATTAT CCGTC               CGGGAGCGCAATGCT  59 51
HF553_RS05760 1174598 .. 1174611 -  -9.5  -3.11459   AAGATGATGACGTAA               GCGGC TTGC GCCGC                TTTGCTATTTTTTGG  71 30
HF553_RS05750 NONE
HF553_RS05745 NONE
HF553_RS05740 1171729 .. 1171748 - -13.6  -5.40072   CCCTTGTCAAAAAAA            GGCCAGTC TGTC GACTGGCC             TTTTTTTTACCGTTT 100 32
HF553_RS05675 1160502 .. 1160534 -  -9.2  -3.87694   AACAAAACAGGGAAA     TCAGTGT-TCCCCGC GCCA GCGGGGATAAACCGA      AGACAACTCCTGTCT  79 100
        cas3 NONE
        sopD 1149364 .. 1149380 -  -9.4  -4.72272   TGCTGTTATGAAAAA              TCCGGC AGGCA GCCGGA              TTTTAAATTGGTTAT  91 55
        queD NONE
HF553_RS05580 1135943 .. 1135988 -  -5.4  -4.63932   TATTCCGCAATAAAA CTCAACAGGAATACCCTACC TAAAGC GGCAGGGTATTATCGTCGTG AATCTGTTAACTGAA  74 41
HF553_RS05575 NONE
HF553_RS05570 NONE
HF553_RS05565 NONE
HF553_RS05560 NONE
HF553_RS05555 NONE
HF553_RS05550 1129630 .. 1129646 -  -4.3  -2.80994   CGCAACTGGAGCAGA              GCCCCTC ACT GAAGGCC              GAAAAATTTTTCGGA  47 97
HF553_RS05545 1127930 .. 1127946 -  -2.3  -2.67515   TTCATTACTATAGTA              TTTATTC TAT GAATAAT              TAGCTATGAGTCTGG  39 362
        barA 1120700 .. 1120714 -  -8.5  -3.30124   TTGTAGGCCGGATAA               GGCGG TCACG CCGCC               ATCCGGCGAATATCA  69 38
HF553_RS05495 1114935 .. 1114954 - -10.7  -2.78679   TTTCCTGAGGTAAAT            CCCTCCC CCCTAC GGGAGGG             TACCTTTTCGTTTGC  74 147
        queF 1111278 .. 1111289 -  -2.2  -3.12257   TGACAAAAAAGATTA                CTGA CGCG CCAG                 CCTGCCCGTGGCGGG  42 11
        ppnN 1109764 .. 1109790 - -13.7  -2.62425   AAGGAATGGGAGAAG         CGCCCGGCTGC TGGCG GCAACCGGGCA         TAAGCGTTAAGCGCA  86 32
        sdaC 1107916 .. 1107934 - -13.1  -3.61902   TTGTATCATAGAGAA             GCGCCGC GGTAA GCGGCGC             TAAAGGACTTAGCTG 100 34
        sdaB 1106462 .. 1106490 -  -7.5  -4.22375   ACATCAGGCAACAAA       GCCGGAT--GGCG GCGAG CGCCTTATCCGGC       CTACAGATCCTAAAA  74 52
         xni 1105563 .. 1105574 -  -7.2  -3.30124   CTGTAGGCCGGATAA                GGCG TTCA CGCC                 GCCATCCGGCAACAA  63 43
        fucP NONE
        fucI 1099924 .. 1099938 -  -4.2  -3.94381   AGATAACTCCATAAA               CGCC GCCCGAT GGCG               CTACGCTTATCCGGC  57 96
        fucK NONE
        fucU 1098034 .. 1098052 - -13.1  -3.17212   CCATCATTCGATGAA             CGCCCGC GTCAT GCGGGCG             CACCGGCAAGAGATT  91 39
        fucR 1097243 .. 1097289 - -10.9  -4.88736   GACGAGCGATAAAAA CGCGCTGCCGTCATCCGGCGC GTCATCA GCGCCGGATGGC-GCA-CGCT TATCCGGCCTATGAC 100 34
        csdA NONE
        csdE 1092149 .. 1092167 -  -3.8  -2.57683   ATATCCTGTTATAAC             TTCACCCG ATG CGTATGAA             TTTTCCAGTTCTCCT  44 258
        rarD 1090846 .. 1090857 -  -2.2  -2.79327   CGATCCGACGCAAAT                CCAG GTCG CTGA                 TTTGGCGAAAACCAT  39 381
HF553_RS05365 NONE
HF553_RS05360 1088734 .. 1088747 -  -8.1  -5.77988   ACAGATACAAAAAAA               CACCC GTAA GGGTG                TTCATTAAGTTGGTT 100 36
        argA 1085730 .. 1085743 -  -4.5  -3.32963   AGTCGTACCGGATAA               GACGA GTTC TCGCC                GGATGGCGACGCGTA  52 113
        mutH 1065786 .. 1065805 -  -9.2  -2.91199   GAAGCGGTAATTATA            GGCCCGTC GAGT GACGGGCG             AAAGCCCAGGCTGAA  67 149
HF553_RS05280 1065001 .. 1065029 -  -9.6  -2.82263   AAGGAAATAAAGTGA       GTATTCGCTCCCC AGCG GGGGAGCGAG-AC        AGGATTACAGCGGAT  69 30
HF553_RS05275 1064620 .. 1064644 -  -3.5  -3.30159   TGAAGGCCTGCAGAA          CGCTGACCT TGATCAC AGGCCACCG          CTTAACGTTCGATAA  48 27
HF553_RS05270 1063031 .. 1063048 -  -5.5  -2.78596   GATCTTCTCATTACA             GCACGCA TTGC TGCCTGC              TTATGCCTTGTTGCT  47 392
        galR NONE
HF553_RS05250 1057284 .. 1057296 -  -3.3  -3.11634   CGTCAGACCATTGAA                GAGCT GTT AGCGC                TGGAGATGCTCTGAA  45 49
HF553_RS05240 1054548 .. 1054574 -  -7.3  -2.57211   AGGCGGGCGCAGAAG         GCATTGTGCTG TGTAC CAACACCATGC         ATAAAATCGCGCACA  54 446
HF553_RS05205 1047525 .. 1047547 -  -3.4  -4.62708   AACACACAAAAAGAA           GCGCAATTTA CCA TAAATAGCGT           CAGTTGGGGGCGTTT  66 107
HF553_RS05200 1046225 .. 1046248 - -12.5  -4.53303   GATTCTTATATAAAA          TAGCCGGGA GTTATA TCCCGGCTA           TCTTTTACTTTAGCC 100 35
HF553_RS05190 1044828 .. 1044845 -  -4.9  -3.84985   GAGTAAAATACAGAA             TTCAGGCG GGA CGC-TGAA             TGTATGGCCTTTCAT  59 117
HF553_RS05135 1034375 .. 1034398 -  -4.5  -3.57144   TGCCTGATCGTCAAA          GCCAACATG CCCCTT CAGGCTGGC           TTATAAGTCAGAGTG  55 108
HF553_RS05130 1033109 .. 1033139 -  -8.4  -3.30701   GGGGAGTAAACCGAA      GTGCTGAC-GGCGA ATTAA TCGCCAGTCAGC-C      AGTAAGTCTCTTGCC  69 286
         idi 1031480 .. 1031512 - -14.2  -3.82865   GAAATAAGATGTAAA     TTGCCGGATGG-GGC ATTA GCCGCCATCCGGCAT      CTCTTCGTTCAGGCG 100 60
        fldB 1024679 .. 1024711 - -12.8   -3.0752   GATATCAGGCCAACA     CT-GACGGAACGGCG TAAA CGCGGTTCCGTCGAG      AGGGAAATACAGCGA  83 49
        ygfZ 1022694 .. 1022729 - -14.2  -3.13504   GTGGGATGAAAATTA    TGTAGCTACCG-CTTGA CGT TCAAGACGGTAGCTACG    AGAACAGCACGTGCG  95 88
        bglA 1018705 .. 1018730 - -13.3  -2.73007   AAGACTCGTTCAAAG         TGTTACCCGCC GACT GGCGGGTAACG          TGCAGGAGTTAAAGC  85 34
        zapA 1007394 .. 1007415 -  -8.1  -3.28791   ATTCTGTTTTCACAA           TCACTTTAC CATA GTAAAGCGA            AAAGTGTTATTCAAA  65 32
        ssrS 1007195 .. 1007215 -  -3.9  -3.35679   TGTCGCCAGTCAGAA            GGGGAATCT CCG AGATGCCGC            CGCAGGCTGTAACCC  50 7
HF553_RS04995 1006390 .. 1006409 - -11.4  -3.71649   CGCTGAAACGGGAAA            GCCCCTAC CGAG GCAGGGGC             TCTAAAAAGGAAAGG  91 196
        argP NONE
HF553_RS04975 1002589 .. 1002602 -  -3.7  -3.84246   GTGCGAATGATGAAA               GCCGC GGAT GCTGC                GCCGGTATCTGCGCA  56 214
HF553_RS04940 NONE
HF553_RS04935 NONE
HF553_RS04930 NONE
HF553_RS04925 NONE
HF553_RS04920  993096 ..  993115 -   -15  -4.42619   TAATACGGCATAAAA            CGGGTCGC TTCG GCGACCCG             TTTTTATTCCCCCTT 100 29
HF553_RS04910  990017 ..  990028 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTCA CGCC                 GCCATCCGGCACTGT  63 48
HF553_RS04890  986325 ..  986335 -  -8.2  -4.36914   GTTCTGGGTATAAAA                 CGCG ACG CGCG                 GCTCATACAAAAGCA  81 77
        metK  984804 ..  984830 -   -16  -2.80016   GTGTATCAGCAATGA         TAAAGGCCAGCA GGG CGCTGGCCTTTA         TAAGTACGGTATGGT 100 76
        galP  982959 ..  982985 -   -21  -5.08601   GGACTGCAAGAAAAA         CGCTTCCTCCTG TGG CAGGAGGAAGCG         TGGAGGGATTAGTCG 100 34
HF553_RS04870  982398 ..  982418 -  -9.7  -3.72695   AGTCCGCTCAGGAAA            GTTCCCGGA CGT TTCGGGAAC            TACCCGGCGACCAGT  79 25
        endA  981551 ..  981567 -  -3.5  -4.11512   GCATAATAAAAAAAT              CCGCGTC ATG GCCCCGG              CGTTTGGCTATCCAG  57 74
        rsmE NONE
        gshB  979706 ..  979728 - -10.6  -3.51924   TTGTCACTCATATAA           GCCGTCTTTT GCC AAAGGACGGC           GGCCTTATCGGGCAA  81 138
HF553_RS04850 NONE
        ruvX  978581 ..  978605 -  -2.2    -3.794   GTTGAAGGCATTAAA         CCA-GCTTATT GCCC AGTAAGCCTGG          CAACCGTGACCGCGT  51 66
HF553_RS04830 NONE
HF553_RS04825 NONE
HF553_RS04820 NONE
HF553_RS04815 NONE
        hemW  973385 ..  973409 -  -9.4  -3.78312   AAAGGAGTTATTAAA         TAATGCGCTCG CCGG CG-GCGCATTA          ACCGCCACAGGTCGG  79 95
        mutY NONE
HF553_RS04775  967633 ..  967665 -  -9.2  -3.02144   GCAGCGGTGCTAAGA      GCTTATCCGGCATA ACTCA CAGGCCGAATAAGC      GCAGCCTCATTTAGC  68 48
        mltC  966315 ..  966326 -  -5.8  -4.11751   ATGAATGTTTTAAAA                GGCA CATT TGCC                 GTTGTGATTTGGTGT  65 189
HF553_RS04765  964956 ..  965007 - -18.3  -3.51708   TATGTTTTAAAGTAA CGTTGCCTGCAGGCCGGATAAGGCA TTTA CGCCTTATCCGGCCTGC-GA-AACA GGGCAAGGATTAATG 100 35
HF553_RS04755  961587 ..  961608 -  -3.8  -2.71364   CTATCCGGGCAACGA           GGCGCATTA AACCG TAAT-CGCC           TCGCTTCGTCAACGA  45 104
HF553_RS04750  961361 ..  961378 -  -4.7  -2.81072   CTGACTGAACACAAT             GAGCCCC CACC GGTGCCC              CCAATGAACGCTTGA  47 153
HF553_RS04745  960077 ..  960103 - -18.2  -3.20991   TGTAAGTTAACGGAA         TCCCTCTGATCT TAC AGATCAGAGGGA         AAGGTTATTGATTGT 100 67
HF553_RS04740  958934 ..  958956 -    -7  -3.60098   ACTGTTGATCCGAAA           CGTTTCGGGT ATC AACCAAAACG           TTTCGGATATGTGAG  64 54
HF553_RS04735  956735 ..  956756 - -10.1  -3.57639   TAATATTGAGAAACA           GGACGGAGC TGAG GCTCCGTAC            CTCTCTTCACACAGC  78 32
HF553_RS04730 NONE
HF553_RS04725  953953 ..  953967 -  -4.3  -3.52204   GTACTGGCAAAGTAA               TGACA GATAA TGTCA               GAAAAAATACTGATA  54 51
HF553_RS04720  952096 ..  952125 -  -4.2  -3.96999   TGACACCGAAAAATA       GCAG-GAACCCGC TCGCT ACGGGTCCTCAGC       TCAGTGCAAACCTGA  57 304
HF553_RS04705  950015 ..  950027 -  -4.7  -4.41241   GAAACTTTCAGAAAA                TGCCC CCA GGGCG                ATAACCTGGGGAAGG  66 103
HF553_RS04625  929995 ..  930017 -  -7.6  -3.21912   TTCTGAATGGAGCAA           CCGGGCCCCT TCA AGGAAGCCGG           CTACTTTTCAGCAAT  59 199
         dgt  925117 ..  925166 - -29.9  -2.77569   AAACAAGGTCAAGCA CTGATGAATCCCCTAATGATTTT TATC AAAATCATTAGGGGATTCATCAG GACTCAGTATAAATC 100 414
HF553_RS04590  923512 ..  923542 -  -6.6  -2.70932   GCCTCGTGTTAACGA       CAGCCGCTTCTCGG ATA CCGCCGGGCGGCTG       ATGTACCGGCACAGC  55 102
HF553_RS04580  921973 ..  922005 -  -9.1  -2.88861   GACTAGCCTTACAGA      GCGCCGCAACAACAA TAC TGGTTGTTGCGGCTT      ACTTGTCTGCTGACT  67 134
        floR NONE
HF553_RS04570  920125 ..  920143 -    -3  -3.08471   CATAAGCGCAGCGAA             TGCCGGGT AAT ACTCGTCA             ACGATCTGATAGAGA  43 232
     tetR(A)  918021 ..  918043 - -14.9   -4.7373   GCAGGGCATGAAAAA           GCCCGTAGC GGGCT GCTACGGGC           GTCTGACGCGGTGGA 100 110
HF553_RS04510 NONE
HF553_RS04505  910845 ..  910883 -  -5.2  -3.38812   GTTGCGGGAACAACA   TGGAGGAGCAACAATACG ATG CCTGTTGCTGCTCAGCCA   GACGAGCATTTGCCA  53 303
HF553_RS04485  908951 ..  908971 -  -8.3  -3.37796   GTCTATTACGCATAA            CAGCGGT TCGGCAC ACCGCTG            TACATATCAGCCGCA  64 338
HF553_RS04460  900896 ..  900909 -  -2.3  -5.10656   ACCAAAAGAAGAAAA               TCGGC AGGA GCAGA                AGTGGTGAAAGTTAA  71 37
HF553_RS04450  898921 ..  898960 -  -6.5  -2.61264   CGTGTTATTGATAAT  GACAGACGGTATACGGCA GTGGT TACCGTAATCCGT-TGTC  GTGTAAAGGTATACG  53 66
HF553_RS04445 NONE
HF553_RS04440  897917 ..  897942 - -14.7  -5.07011   GATATAAATGAAAAA         GCCGCGCCTCC CGGA GAAGACGCGGC          CTGATGGATGAAATG 100 49
HF553_RS04435  897054 ..  897067 -  -2.4  -3.40775   ACTTTCAGGGAAACA               GCAT CAGCGC ATGC                TCTCCAGCAGCGTTT  45 15
HF553_RS04430 NONE
HF553_RS04425  895993 ..  896008 -  -2.5  -3.55444   CGGTGACGGGTTAAA              GCAGA CCGTGT TCCGC               AAAGGAGAAAACCTG  48 5
HF553_RS04420 NONE
        cbtA  894854 ..  894874 -  -7.5  -3.25166   TTACTTCAAAAATTA            TGCCACCGG TAT CCAGCGACA            GCACGGCATGCCAGG  62 395
HF553_RS04385 NONE
HF553_RS04380  891221 ..  891243 - -12.7  -4.65153   GCAGATAAATGAAAA           CGCCAGCCC TGTTC AGGCTGGCG           TCAGTGGAATGAAGT 100 55
HF553_RS04375 NONE
HF553_RS04370 NONE
HF553_RS04365  889605 ..  889625 -  -3.3  -4.01115   AGTGACAACAAAATA            CAGAGATTT ATA AAATACCTG            GCTACCTGTGTTAGG  57 64
HF553_RS04350  886877 ..  886903 -  -7.3  -2.71712   GGCCTGTTTTTAAAG        CAGG-CACGGGC AATT ACCCGTATCCTG         GCTAATAATTACGAT  58 56
HF553_RS04345  885309 ..  885329 - -11.8  -3.12351   CTTTTTCATATCTAA            GGGACGCC GCAGT GGCGCCCC            TTAATTATTTACATA  81 235
HF553_RS04340  883121 ..  883137 -  -7.2  -3.66256   CATATGGGGAAAAGA              CCCGCA ATTGA CGCGGG              TTAAAAAGCACGCTT  67 41
HF553_RS04315  877403 ..  877415 -  -7.7  -3.08312   AACGCAGCGAGCGAA                CCTGA TAA TCAGG                CAGACAGTCCACCTT  62 79
        uxuA  870582 ..  870606 - -16.5  -3.62275   ATTGAGTAGGGGAAA          TCGCATGACGC GTC GCGCCATGCGA          AAGAAGGTTATTTGC 100 33
HF553_RS04280 NONE
        uxaC  867297 ..  867307 -  -3.2   -4.7261   ATTTATTAAAAGAAA                 CCAC ACT GTGA                 AGTCATGAGTTATTA  66 325
        yghU  862590 ..  862622 -   -10  -2.76468   CAGCAGGGAATACCA     TGCCGGATGACGACA TTAC TACC-TCATCCGGCA      TCATGGTTTAACTTT  71 33
HF553_RS04185 NONE
HF553_RS04180  849390 ..  849407 -  -2.7  -2.91681   CTTTAAGCGTAGACA             CTTTTAC TACC GTAAGAG              GGAGAATCAGAACGA  42 89
HF553_RS04175  848342 ..  848358 -  -3.7  -3.60948   GAAGAGACCGCGAAA              GCGAA ATAAATA TTCGC              TGATACTGTAGGCCG  53 130
        metC  845694 ..  845722 -  -4.5  -4.20516   CCCGGACGCAACAAA        CGCAGACTTTTCC ACG GAAATTGTCTGCA        TATATGTCCATCCCC  64 48
HF553_RS04155  844912 ..  844939 -  -5.6  -2.60392   CACGGGTCAACGAAG        CGTAACCGGGCCA TCC TGGCC-GATTATG        GATACGTCAGGCGTT  50 32
        yqhD NONE
        dkgA  841653 ..  841672 -   -15  -5.15969   TCGGAATGCAAAAAA            GCCCGACG ACAT CGTCGGGC             ATGGCGTGCGATAAA 100 47
HF553_RS04135 NONE
HF553_RS04130  839353 ..  839376 -  -8.9  -3.01924   TACGCCGGTGGAACA          TCAGCGGCA GGGGCT TGCCGCTAA           TAAGAAGCGCGGGAA  63 192
        qseB NONE
        qseC  823274 ..  823298 -  -4.3  -3.67068   AGCAAAATGTGCAAA          GTCTTTTGC GTTTTTG GCAAAAGTC          TGTGTTACCAACTTA  55 30
HF553_RS04065  822619 ..  822631 -  -4.1  -3.10894   AGGATGACCAGTTAA                GCAAA AAT TTCGC                TCAGATGCTTGCGAT  47 9
HF553_RS04060  822206 ..  822250 -  -7.3  -2.64794   GCGAATCCGACATGA CGCCGCAGCCTGATGGCGACAC TTGC GCATCG-CATCAGG--GCGACG TCAGACGAGGGTAAT  57 44
        tolC  815996 ..  816053 - -17.1  -2.78384   CGCGGCTTTATGACA GGTAGCGCCGCGCTTACCAGACCTACA AAGG CACAGGTCTGATAAGCGCAGCGTCAGC GAATAACTTATCAAT 100 36
HF553_RS04025 NONE
HF553_RS04020  813971 ..  814000 -  -8.5  -2.71681   TAAGGCGCTGAATGA       TTGCCCGATG-GCG CTA CGCGCATCGGGCTT       ACAGGAAAATCTATC  64 36
        zupT  811987 ..  812000 -  -2.5  -3.61178   TTTAGTGATGTTAAA               TTTTA AGGG TAAAA                AGGATGTTTATTGCC  50 272
HF553_RS04005 NONE
HF553_RS04000 NONE
        dsbI  808380 ..  808405 - -15.5   -4.3898   ATTATTGTGAGAAAA         GCAGAGGCCTG AATG CAGACCTCTGC          TTTGGTTTATCTATT 100 45
HF553_RS03985  806842 ..  806859 -  -8.3  -2.64243   TCAGATCTTATATGA             GCGGGCC GTCA GGCCCGT              TCACGTTTTTACTCT  63 34
HF553_RS03975 NONE
HF553_RS03970  803968 ..  803989 - -13.7  -5.72118   AAAAAAGATAAAAAA           TCCCCGGCC TTAT GGCCAGGGA            CAGGAGATATGGCGG 100 45
HF553_RS03965  803675 ..  803697 -  -9.1  -3.94051   AAAGTAAAGGAATAA           GGGTGAGAG GGGAT CTCTCCCCC           CTCTGATTGGCTGTT  79 39
HF553_RS03945 NONE
HF553_RS03940  795151 ..  795165 -  -2.7  -3.96618   CTGAAGCCGAAAGAA               CCGCG CGCGC CGGGG               CTGGATGATATGACG  56 508
        plsY  793309 ..  793331 - -11.2   -4.7416   GTAAAAGCGGAAAAA           GGGGGCGACA TCA TGCCGCCCCA           ACGGATTTACAGCAA 100 241
        rpsU  791765 ..  791791 - -10.9  -4.40882   CATAAACGAAAACAA        GCCGCGCATTCC TTTC GGAA-GCACGGC         CTTACAACTACAACT  90 75
        dnaG NONE
        rpoD  787826 ..  787843 - -14.1  -5.60993   GGCCTGATAAAAAAA             CGCCGCC TTGC GGCGGCG              TTTATACGTGTGCGG 100 45
HF553_RS03885  786985 ..  787003 - -10.3  -5.33331   TAAAGATAAGAAAAA             GCCACCT AAAAA AGGTGGC             TTAACTTAATGATTT 100 54
HF553_RS03880  786228 ..  786241 -  -3.9  -3.72231   TTAGAGATGGAATAA               TTTTG TTCA CAAAA                CGGATGTCTGATGTA  55 314
HF553_RS03750 NONE
HF553_RS03745  765902 ..  765918 - -10.8  -3.14132   TGCGTTTTGCATGAA              GCCCGG ACAAA CCGGGC              TTTTTTATGCCTGTT  78 39
HF553_RS03680  758032 ..  758045 -  -3.8  -2.62263   ATTGCGTGCATATGA               TGGC TGTGTT GCCA                AAAACACTAAACCTA  44 110
HF553_RS03675  756694 ..  756719 - -10.5  -5.49568   AAGGCAAAAGAAAAA         GGGTTAGCTGA TTTA TTAGCTAACCC          TTTGTTGTATATGGT 100 196
HF553_RS03605  746214 ..  746224 -    -4  -3.83026   GGCGCCCAGATTAAA                 TCAA GTA TTGA                 GCGCCTGATTATGTT  55 90
HF553_RS03585 NONE
HF553_RS03580 NONE
HF553_RS03575  738518 ..  738533 -  -4.6  -3.71552   ACCGCACGAATATAA              TGGTGG GTTA CCGCCA               AACGAATCAGAAAAC  58 311
HF553_RS03505  722720 ..  722740 - -11.1  -3.36327   TCAGGTGATGCATAA            GGGCCTTTC GCT GAGAGGCCC            TGTTTACACAATTAA  80 191
HF553_RS03470  716463 ..  716474 -    -3  -3.85698   GTGTTTGTCCAGAAA                TTCT GGGA AGAA                 CAGGATGTTGCTCAG  54 459
HF553_RS03455  713749 ..  713761 -  -6.9  -4.96848   TTTCGCAGACAAAAA                CGGCG CTA CACCG                CACCCGCCTGCGGTT  82 421
HF553_RS03340 NONE
HF553_RS03335 NONE
HF553_RS03330  692685 ..  692709 -  -6.4  -4.51777   ACAGGAGAAGCAAAA         CGAGCCAATGC AGGA GCTTTGGC-CG          GGATGGTTATGACGC  76 337
HF553_RS03270 NONE
HF553_RS03265 NONE
HF553_RS03260  683988 ..  684005 - -11.3  -5.72622   GTCAGAAACAAAAAA             GCCACTC TTTA GAGTGGC              TTAATTATATGATTT 100 185
HF553_RS03250  681827 ..  681839 -  -4.9  -2.62616   GTATGTCGGATATCA                TCAAT ATC ATTGA                TTCCATTGCCTTTCA  44 494
        ygjG  676216 ..  676241 -  -8.3  -2.78211   ACCCGGGGAAAACAG         GCCGGATAAGCA TAG CGCC-ATCCGGC         ATCGTGTTTAAACCT  64 33
HF553_RS03225  673980 ..  674030 - -13.5  -3.28712   GGGCGCCGTCGATAA GGCGCTCAAG-CGTCATACCGGCCT ATA AAACCGGTATGACGGCGTAAGC-CC GATAAGCGCAGCGCC 100 55
HF553_RS03215  672158 ..  672173 -  -3.2  -2.88427   AATACCCTCTACAGA              TCGTCA TCCT TGACGT               GGCGGCAGGCAATGA  44 112
HF553_RS03210 NONE
HF553_RS03205  670085 ..  670110 - -15.5  -6.11644   CCATGCAAAAAAAAA         CGGCTAACGCC GAAT GGCATTAGCCG          CTGCTTTTATGCATA 100 245
HF553_RS03200  669032 ..  669058 -   -13  -5.28942   CATGTTAAACAAAAA         CGCCCGACAG GTGTGCG CTGCCGGGCG         TTTTTGACGGGGCAG 100 59
        sstT  667605 ..  667617 -  -6.2  -3.08133   CACTTAGCTACGCAA                GGCG TTATT CGCC                AGACGTTCGTCCTCT  56 1
HF553_RS03190 NONE
        mzrA  666057 ..  666068 -  -4.4  -4.16371   CATTAAACAATGAAA                TCAC CAAA GTGA                 GTGATATGATTCGGA  64 51
HF553_RS03180 NONE
HF553_RS03175  665235 ..  665247 -  -4.1  -2.57683   AGAGTCCGCCATAAT                TAACG ACG CGTCA                GCAGTACGCCCAACA  44 12
HF553_RS03170 NONE
HF553_RS03165  664483 ..  664520 - -20.7  -4.45485   ACGATATGCATAAAA   GTATCGCGCCACCAGGT GATA ACCTGATGGCGCGATGC    TATAAAAGAAAAGAT 100 42
HF553_RS03160  663864 ..  663883 -  -6.4  -4.84311   CTTCAGATAACAAAA            GCGAGG CGCTATTC CCTCGC             TTTTTTAATTGAGTA  80 49
HF553_RS03155  662830 ..  662847 - -12.7  -3.73647   GGTATTTATTAATAA             GGCGTCC CGGA GGACGCC              TGAAATTAGCCAAAG 100 31
HF553_RS03150  662347 ..  662361 - -12.8  -4.07568   CGCGGCGCTTTAAAA               GCGGCG CCG CGCCGC               CATCAGGAAAAACGT 100 28
HF553_RS03140 NONE
HF553_RS03135  660329 ..  660351 -    -9  -2.96249   GCGCATTAATAATCA           CGCCCCGGCA TGA CGTCGGGGCA           GCGTGTTGCCCGATG  67 109
        garD  642429 ..  642447 -  -5.3  -5.80248   TAAGACATAAAAAAA             GCATGTC GGGCA GACATAC             TTCAGGCTACAGACT 100 130
HF553_RS03065 NONE
        gatZ NONE
        gatA  639575 ..  639593 -  -5.9  -3.80461   CAATTTATTATCAAA             CCTGGGC GCACT GCTCAGG             CTCAAGGATGGTTTC  61 2
        gatB NONE
HF553_RS03045  637850 ..  637877 -    -4  -3.15427   AACATTCTCCAGGAA        GGTGAGGGGAGC GATT GCTCCCCTAAAA         TTAAGAGGCGATTTG  48 26
        gatD  636759 ..  636787 -  -4.5  -4.06903   AATTTCGAAAGGAAA        TGTGAGCCAGC GCAGGTT GCTGGCTCGTA        CCATCAGGAAAGTTG  61 29
HF553_RS03035  635551 ..  635565 -  -4.9  -4.52347   CAAAGAAGATGAAAA               CCGCC GTAAA GGCGA               GATGGTGCTGATTGT  68 367
HF553_RS03025 NONE
HF553_RS03020 NONE
        diaA  631822 ..  631833 -  -4.4  -2.71731   TGTACTCCTTAATCA                TCCT GGTG AGGA                 AAAAGCGTGTTATCG  47 7
        yraP NONE
        yhbO  629498 ..  629514 -  -2.1  -3.90744   TGGCTGGCGAAACAA              CACGTGG TGA CCTGGTG              CGTACACCATGAGGG  52 390
HF553_RS02990  628963 ..  628973 -  -2.4  -2.87211   ATCCGGCGTTATATA                 GCCG CTT CGGT                 TTTGAACTGGCCGCA  40 153
HF553_RS02975 NONE
HF553_RS02970  625916 ..  625943 -  -6.2  -4.42748   TGACGGCAAAAACAA        TGCCCGAT-GGCG CTG CGCTTATCGGGCC        TACGGGATCGCTATT  73 76
HF553_RS02965  624763 ..  624803 -  -6.9  -4.60487   GATTACTTCGAAAAA  CATCGCCGATTGCCAAC CATCACC GTTGAAAATCGGCGTTA  TAAAATCAGCCCAAC  78 31
HF553_RS02955  623371 ..  623395 - -11.5  -2.79684   CCAGTAATTGAACGA          GCCGGATGA GCTGTTT TCATCCGGC          AATATTTCACAAGTC  77 53
        argG  607845 ..  607860 - -11.8  -5.29782   GATATTCACAAAAAA              GGCCGC TTTC GCGGCC               TGTTGCATCAACGAC 100 47
        yhbY  600267 ..  600281 - -12.8  -5.13137   TAAAGAAAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACGGAGA 100 118
        dacB  597978 ..  597997 - -16.4  -3.41587   GCCTATAAAAGCCAA            CGGGCCGC ATTT GCGGCCCG             TTTTATTATGTTCGT 100 89
        ispB  593837 ..  593852 -  -6.1  -2.79023   GAACGGCATTAACGA              TCGCG CTGCAC CGCGA               TGTGTGCGAGACCGA  53 3
        sfsB  593272 ..  593295 -  -9.6  -3.63515   CTGTACGCTGAATAA          CCCCCGCGAAC GCG ATT-GCGGGGG          TTTTTTTACAGGCAC  77 41
HF553_RS02770 NONE
        kdsD  586207 ..  586222 -  -4.6  -2.62616   TGAGTTTCTACACGA              CGCCTG CACG CAGGAG               ATCATGCATATGTAA  46 2
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB NONE
        rpoN NONE
         hpf  581940 ..  581966 -   -13  -3.92522   CGCTAACTGTACAAA         TGGCCCGTTGTG TCA CACAACAGGCCG         TCCTGCACTGGCTAA 100 53
        ptsN NONE
        rapZ NONE
         npr  579984 ..  579997 -  -2.5  -4.58283   CAAGTCCTGGAAAAA               TTTAT TCAC ATAAA                TTTAGTATGGACAAA  63 244
        yrbL  579154 ..  579165 -  -7.2  -3.32844   TCCGTTACGCTATAA                GGCG AATG CGCC                 TTCCGGCTATGTGCG  61 194
        gltB NONE
        gltD  567718 ..  567729 -  -7.2  -3.23979   AGCACAAGGCATCAA                CCGG GGAG CCGG                 AAGGGTTATACTTCG  62 31
HF553_RS02680  566369 ..  566384 -  -3.2   -3.1811   GTTCTCAGAATAAAG              CAAACG TTTT CGTGTG               ATATTTTTTTTGATA  46 65
        codB NONE
HF553_RS02670  563337 ..  563348 -  -7.2  -3.96327   AGGCCGCAGGAGAAA                GCGC CGGG GCGC                 TATGAATTGCAGGGC  71 464
HF553_RS02605  552843 ..  552861 - -11.7  -3.13082   GGAAAGATAGAGAGA             GGGCGCA AGCGA TGCGCCC             GATAAATTTCTTAAC  83 50
        degQ  551320 ..  551349 -  -7.9  -3.11192   CATACCATGAGTTAA       CCGGACATCA-CAT CGC AGGCTGATGCCCGG       TTTAAGACAGGATTA  62 38
        degS  549966 ..  549983 -    -7  -4.07568   TGGTTGCCTGGAAAA             GCGCAT CGCAGT ATGCGC              GTCAACAGGCGCAAC  70 241
        argR  539631 ..  539657 -   -13  -4.09649   GAGAGGACAAAAAGA         TGCCTCCGCCGT ACG ACGACGGAGGAA         GTGGGACTAAAGCTC 100 32
        yhcN NONE
        yhcN  538608 ..  538626 - -13.1  -5.47914   AAAAAGCATAAAAAA             GCCCCCG GCAGG CGGGGGC             AAGTCGTCGGGTTAG 100 52
        aaeR  533089 ..  533143 -  -8.1  -3.32844   GGCGGCACCGCATAA CTGTCCGC-CTTATCAGGCCTGTGGTG TGTGC CGCC-CAGGCCTGATAAGCGCAG-C-G CCACCAGGCAATGTC  65 93
HF553_RS02455  519343 ..  519391 -  -7.6  -2.94099   CTTTTTCATCACAGA CTCCCGGTC-TACCCACCACAACA TGG CGT-GTAGTGAATATGACAGGGAG TGTGTCAATGTGTAA  59 83
        msrP NONE
        msrQ  517581 ..  517594 -  -4.5   -4.4078   TTCTGCGAACGAAAA               TCGCC GTTG GGCAA                TGTAAAGTCGCACAT  66 163
        accB  516858 ..  516885 -  -2.7  -3.09803   CAATTTTATCCAACA        TGTTCGCC-TCG TTACT CGATGACGACCA        GTGGCTCGTCAAATT  43 9
        accC  515473 ..  515489 - -10.8  -5.72622   CCCAGAAATAAAAAA              GGCCGG ATTCA CCGGCC              TTTTGAGATTAACGT 100 45
HF553_RS02430 NONE
        panF NONE
        prmA  512795 ..  512814 - -11.4  -4.36914   GTTGTGTGGAGAAAA            GCGTGGCC GGGC GACCACGC             TGACAAGAATTATTT  93 35
        dusB NONE
         fis  510820 ..  510845 -  -8.2    -5.252   GATGCGTATAAAAAA         GGCGCTTCCC CATGCC GAGTAGCGCC          TTTTTAAACAAGCAG  91 55
        yhdJ NONE
HF553_RS02395 NONE
HF553_RS02390  507388 ..  507404 -  -5.1  -3.89756   ATGCCAAATGAACAA              CAGGC GGAAGAA GCCTG              AGATTATTTTGAGTT  61 53
HF553_RS02380 NONE
HF553_RS02375  502019 ..  502034 - -10.4  -4.09864   ACGTACCGTTTAAAA              GGCGTC CGAA GACGCC               TCTGTTTACCGGTTA  82 38
HF553_RS02370  501564 ..  501580 - -15.1  -3.69323   TTACGATTACTGAAA              GCGCGGC ATT GCCGCGC              CTGCATGTATCATTT 100 35
HF553_RS02330  494466 ..  494481 -  -4.7  -3.27476   AGGCTGAAGCATTAA              TCCTG GCCCAG CAGGA               AGACGATCACGGTTG  49 32
         def NONE
         fmt  489081 ..  489099 - -10.2  -5.54907   TGTATAAAATAAAAA             TGCCCGGT AAC ACCGGGCT             TATAAAGACGTGACC 100 42
        rsmB NONE
        trkA  486352 ..  486370 - -11.7  -4.90917   AAAGGGAATTAAAAA             GGGCGCT GAATG AGCGCCC             CTTAAATTAGAGGAA 100 32
        mscL  485766 ..  485817 - -10.3  -3.09933   CGGTAATCGAGGGAA CTGGGAGGCCAGTGGCAAGAAAGT AAGTG ACTTTTTTACCACTGGCCTT-CTG CTTATTAAGAACGGT  73 30
        hopD  470138 ..  470152 -  -4.3  -3.65415   GCAATCACAAATTAA               GGTTA CCGAT TAACC               GTCTGGAAAGAAAAC  55 20
HF553_RS02055  461370 ..  461384 -  -8.5  -5.60993   TCGGGCACAAAAAAA               GCGGG TTAAC CCCGC               TTTTTTTTTGTCTCA 100 38
HF553_RS02030 NONE
HF553_RS02025  455349 ..  455360 -  -5.8  -4.95896   AGAAAGCGAGAAAAA                CCAG CAAG CTGG                 CGGCATTTACTTGTT  83 184
HF553_RS02015 NONE
HF553_RS02010 NONE
HF553_RS02005  452536 ..  452546 -  -2.4  -3.02144   CGAGCGCCGGGAAGA                 CGCG CCG CGCC                 TGTTTACGCACATTA  42 285
         crp  451333 ..  451354 -    -8  -5.30616   CGATGCAAACAAAAA           TGGCGCAT GATAAA ACGCGCCA            TTCTGACGGGATTAA  91 37
HF553_RS01990  449151 ..  449161 -  -8.2  -2.61216   CCATGAAGGAATGCA                 GCGC TTT GCGC                 AGGCGGTAGGGAAGG  56 94
        tsgA  444351 ..  444382 - -13.8  -2.72471   TGTTCAGGATACAAG      GCCGGATAA-GACGC ATC GCGTCGCCATCCGGC      AATCATTATCAATGC  86 34
HF553_RS01955  443125 ..  443136 -  -5.8  -3.14344   TATCCGGCCTACCAA                CAGC TTAC GCTG                 TAGCTACCGTCTTGA  54 44
        nirB NONE
        nirD  439967 ..  439987 - -12.5  -5.72118   AAAAAATACAAAAAA            GGGGAGGCG TTG CGCCTCCCA            AAAATAATTAACCGC 100 33
        nirC NONE
        cobA  437574 ..  437598 -   -13  -4.12188   CGAGTAGTTGTAAAA          TAAAGCCCTG AATAA CAGGGCTTTA          TTTTAATTAATGATT 100 32
HF553_RS01930  431262 ..  431283 - -14.5  -4.69664   GATATGATTTAAAAA           GGCCGCTTA ATAA TAAGCGGCC            TTTATTTGTGTTATA 100 54
HF553_RS01925  430907 ..  430920 -  -9.5  -5.48303   AGAACTGTAAAAAAA               CCGGG AAAT CCCGG                TTTTTTTGTATCTGC 100 54
        mrcA  417834 ..  417847 -  -9.5  -5.66338   AAACACAATAAAAAA               GGCGC CGGA GCGCC                TTTTTTGATCAGAAC 100 34
        igaA  414700 ..  414734 -  -9.2  -3.18274   TCCAGGGTAACGCAA     TTTGCGCGACAGGGTA GCA TACCCTGTCGCACGGC     GGCGCTATCAGATGA  70 33
        yrfG NONE
        hslR NONE
        hslO  412609 ..  412656 - -13.1  -3.86346   GGATGGCGGCATAAA TGC-CTTATCCGGCCTACGGAGCA GGA TGCT--GTAGGCCAGATAAGCGCA GCGCCATCAGGCAAT 100 63
        pckA  408805 ..  408822 -  -8.4   -3.8594   AAGAGGCATAGGAAA             GGGAGG TATTAC CCTCCC              TTTCTTCTTGACGCC  75 78
        greB  405998 ..  406012 -  -3.4  -2.60032   TGGCTGGCAAAAATG               CCAGCC ATC AGCGGG               GGCTTAGGATTCTTC  42 46
HF553_RS01805  403561 ..  403594 - -13.1  -4.14739   GGACGTATTGCAAAA     TCGCAGGCCGGATAA GAAG TAACCCGGCCTGCGT      ATTACCCGATTAGCG 100 35
        feoA  402946 ..  402958 -  -4.1  -3.14602   CTCACTGTATTAACA                GGAAA CCG CTTCC                ACTTCTATTAACGCC  48 7
        feoB NONE
        feoC  400270 ..  400299 - -11.5  -4.21462   AGGCATGACGCAAAA       TTGCCCGGCA-GCG TGA CGCGTACCAGGCAA       TATAACGCGGGATAA  93 80
HF553_RS01785  399039 ..  399054 -  -4.6  -4.07568   TGGTGCCGCGTAAAA              TCGTGC CTTT GCTCGA               TACGTTATGGCCGCA  62 176
        gntX NONE
        nfuA  396999 ..  397025 - -12.3  -2.68823   GGTGGGGCAGACAAG        GCCCGACAGGCG CAAG CGCC-ATCGGGC         ATGGATGCGGGGAAA  81 44
        gntT  395233 ..  395258 - -17.7  -3.62255   GCGAAGAAGAAGTAA         TAAAGCCGGGG ATTT CCCCGGCTTTA          TGATGGTGAGAGCAC 100 118
        malT  387382 ..  387397 -  -6.1  -2.71144   GAGCTGTGCTAACGA              GCCAG CCTTAT CTGGC               CTACACTCTGCGCGC  53 80
        glpD  383560 ..  383577 - -12.7  -4.08767   GGTATGTGGCGAAAA             GGGCGGT ATAA ACCGCCC              CGGATTTTATTACGA 100 35
HF553_RS01710 NONE
HF553_RS01705  376814 ..  376829 -  -8.2  -2.79004   TGATCCTTAAAACAG              GCGAGC CGTA GCCCGC               TAGGGATATTATTTA  60 34
HF553_RS01700  375854 ..  375883 -  -8.6  -5.27335   GTGCTGAAATAAAAA       GAC-ACAGCGGGC AAGAA GCCCGCTTTCGTC       ATAGCTTAAAGTCCC  95 31
        yhhY  357494 ..  357505 -  -2.2  -2.72152   GTCACCATAAAGTGA                TGGC AGAA ACCA                 AAAAAAAACAAAAAT  40 210
HF553_RS01625 NONE
HF553_RS01620  355406 ..  355425 - -10.8  -4.41548   TTATATTTTATAAAA            GGAGTAAC TTTC GTTACTCC             ATTGTTTTTTATTTT  90 34
HF553_RS01615 NONE
HF553_RS01610  353346 ..  353368 - -10.5  -2.74523   TGATTTTTAATACCA           GGCCCGGTG TCAGG CACCGGGCT           ATTTGCAGATTATGC  71 35
HF553_RS01600  350946 ..  350979 - -14.5  -2.72991   GTATACCGTCAATCA     GCCCCAGCG-GGCGGC AGA GCTGCTGCGCTGGGGC     GTGGATTGTATCTGC  83 95
        panM NONE
HF553_RS01535  339335 ..  339366 - -10.8  -3.06796   GGCTACGTTATTCAA      CCCCGGTCACTTAC TTAT GTAAGCTCCCGGGG       ATTTCATAACTTGCC  76 29
        rsmD NONE
HF553_RS01500  332283 ..  332299 -  -6.5  -4.58283   CAACGGCGGGAAAAA              GCCGC TAATGAG GCGGC              GCCGTTACAGCAAAA  78 312
HF553_RS01490  331391 ..  331410 - -12.2  -2.95223   TAACCGGAGGATACA            CTCTGGAG TCGA CTCCAGAG             TCAAGCGCTATTATT  80 40
        zntA  329113 ..  329135 - -14.8  -3.30007   AATATCGCGGGATAA           CCCGGCGACA CGA CGCCGCCGGG           CGGGAGAAGATTAGT 100 36
HF553_RS01480  327107 ..  327130 - -11.1  -2.73542   CTGAACCGGTAATGA          TGTTGCGCA AAACGG TGCGCAACA           TGCAAACTGGCGAAA  69 198
HF553_RS01470 NONE
        dcrB  325524 ..  325551 - -14.1  -5.40072   TGGCGCTTAAAAAAA        CGGCCTCCGTC TGCACT GCCGGAGGCCG         CATCATCATCGTAAA 100 43
HF553_RS01455  323104 ..  323118 -  -2.8  -2.57344   CACTTTTCCCAGAAC               GATCTG GTA CATATC               AGGACCAACGTTGCC  40 74
        acpT NONE
        nikR  321923 ..  321937 -  -2.8  -4.83615   TACGCTTCAGAAAAA               CGATTG GCA CAATGG               CGTAAACATTATTGC  68 132
        pitA  313673 ..  313694 - -13.7   -5.8187   CACTGAATAAAAAAA           GCGGGCCAG TTTC CTGACCCGC            TCGTATTAGATAAGC 100 115
        uspA  312393 ..  312410 - -10.5  -4.99043   GGGGGATAAACAAAA             CGCCCAC AGAA GCGGGCG              TTGTTGTTGATAACC  93 121
        dtpB  310513 ..  310551 -  -3.8  -3.53012   CGCGTGGTGGTTAAA  CGTCCCGATTATGCGCC GCCGCT GGCGGATG-TCGCGACG   CCCAACGCCATCGTC  51 183
HF553_RS01385 NONE
        gorA  303809 ..  303844 -   -14  -2.57136   GTATTAATCATGAAG    GCCTGTGCGCCCACCC TCGA AGATGGGCGCACAAGA     TATTAACGCATGGTC  86 28
        treF  296514 ..  296535 -  -5.9  -5.60689   GCAGACAATAAAAAA           TGGCTGA AAATTCAG TCAGCCA            TTTATGATGCGATTC  93 58
HF553_RS01340  293923 ..  293933 -  -3.2  -4.06687   AGGTGTTACAAAGAA                 TCGC GCA GCAA                 TTTCCGGAGGTGAAG  56 472
HF553_RS01330  292187 ..  292205 -  -2.2  -3.06515   GTGGATGCTGAAAAT             GCGGCTAC TCT GCGGCCTC             TTTAATGGTTTCAGT  42 11
        yhjD  291054 ..  291067 -  -3.1  -2.72661   CAGTAGGCCGAATGA               CGACGC CGT GCGT-G               CCATCCGGCAGCAAG  43 48
HF553_RS01320  289389 ..  289412 - -18.2  -2.66326   GTAATGTGAAACGTA          GCGCCGGATG ACAC CATCCGGCGC           CCTATTACAACGCCT 100 30
HF553_RS01305  285229 ..  285258 - -10.7  -3.25823   CCGGCGGCACAGTAA       GCTGCCGCCTGCCG GCC CGGTAAGCG-CAGC       GCCACCGGGCAAGAG  78 49
        bcsE NONE
        bcsF NONE
        bcsG  265396 ..  265438 - -11.3  -4.78848   GCTGGAAAGAGAAAA CCTCCG-CACGTTGACTGGT ATAA ACCTGGCAACCTGACGGAGG CTAACTTGATCCTCA 100 279
HF553_RS01230  263440 ..  263456 -  -4.3  -4.32034   CGATCAGGATGAAAA              TCCGCAG AAA CCGCTGA              GTTAATTGCGTTTTA  66 131
HF553_RS01190  253390 ..  253408 -   -16  -4.62069   GGCGCATCTGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTGTATCT 100 159
         tag NONE
HF553_RS01150  248034 ..  248073 -  -2.9  -3.34716   CCATCCGCTAAAAAC GGCCA-GCG-GCAAAATCG AAAT CTATTCTGCGCGCATTGCC  AGCTATGGTTATGCG  47 504
HF553_RS01140  245227 ..  245249 -  -6.9  -3.84451   CTCCGTAAATCGAAA           GGTAAGCGC GGCAT GCGCCAACC           GGAACAGGCTTATTA  66 211
        ghrB  244185 ..  244225 -  -7.8  -2.79098   GCGACCCAGTAATGA CAGTCTGCCCGATAAGCGC AAGCCA GCGCTTATCGGGC---CTG TAGCGTTATCCCGCC  60 31
HF553_RS01125  242701 ..  242719 -  -8.1  -3.53091   ATCGGGCGGGGGAAA             CGGCCCT TACGC AGGACCG             TTAAAACAGGAAATG  67 48
        cspA  242198 ..  242217 - -11.4  -5.80364   ATTGGAATAAAAAAA            TCCCCGCC ATCA GGCAGGGA             TTCAAAATTCTGAGC 100 50
        cueP  241501 ..  241519 -   -16  -4.62069   GGCGCATCTGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTTTAAC 100 36
HF553_RS01090  236151 ..  236168 -  -9.9  -3.22774   TACAGTGATGATGAA             TGATGGC CGGA GCCATCA              TTGTCGTTTAGCTAA  72 33
HF553_RS01070  230847 ..  230873 -  -2.4  -3.99374   GCGTAGCAACAATAA        CCTGTTCG-GCA TGAAG TGCACGAA-AGG        GCGTTGTACCAATAC  54 360
HF553_RS01060  227860 ..  227872 -  -3.3   -3.9398   CCATAACGCTACAAA                TGGCG GGG CGCAA                ATGGGGGTCAGGCGG  55 133
        avtA  226140 ..  226158 -  -2.3   -3.3375   AGGAACAGCAGAATA            GCGCGGCG GTGA CGACG-GC             GGACTTTGTGCCGCG  45 423
        yiaK NONE
HF553_RS01035  223433 ..  223443 -  -2.4   -4.4009   CTCTATTTTATAAAA                 CGTC TAT GGCG                 ACTTTTACGACTATT  59 7
HF553_RS01030 NONE
        yiaM  221846 ..  221875 -    -2  -2.92896   AGCAGAGAAATATCA       CCACGGCCATGA TTAGGC TCCTTGCTGTGG        TTGTTGAAAGGAATC  41 8
        yiaN NONE
HF553_RS01015 NONE
HF553_RS01010 NONE
        ulaD NONE
HF553_RS01000 NONE
        araD  215367 ..  215383 -  -4.4  -4.48987   CCGGCAGAATGAAAA             CGCCGAG GCCG CT-GGCG              TGTCGCTGGCCTGGA  68 521
HF553_RS00985  212406 ..  212442 -  -8.8  -3.08679   TGTTCTGACGCAAGA   GGTAATGCCCGAT-GGCG CTG CGCTTATCGGGC-CTACC   GCATTGATATCAGCC  66 267
HF553_RS00975  209338 ..  209359 -  -7.3  -4.13945   ACCGCGATCGTAAAA           GATCGGTAC TATC GTAACGATC            GGATTGTCGCTTTCG  74 476
        mtlA  203164 ..  203184 -    -9  -3.17075   TTTCCCTCAACCTAA            CCCTCTCC ACAAG GGAGAGGA            TTTTGTAGGCCCGGT  70 69
        mtlD NONE
HF553_RS00945  201101 ..  201128 -  -2.7  -4.05026   CCTAAACTCAAATAA        GCGA-CCGCG GGAGTCAGA CGCGGGTCAC        ACATGGAGGATCTAT  56 261
HF553_RS00935  200026 ..  200040 -  -4.4  -3.61715   TATCCTTGTTAATAA               TTTATA TAA TATAAA               TAGTTAACCTATTAT  55 477
HF553_RS00930 NONE
        sadA  194848 ..  194870 - -16.4  -4.30448   AAAGGGAAGTGAAAA           GGCAATGGCA TTA TGCCATTGCC           TTTGATGTCGGGAGT 100 53
        lldP  192950 ..  192961 -  -2.2  -2.86271   TTGGCATCACAATCA                CGGA ATCA TCCA                 GGTTAAAACATAGGC  41 11
        lldR NONE
        lldD  190964 ..  190983 -  -4.8  -2.73268   AATAGCAGAAATTTA            CCGGGCTC TCAC GCGCCAGG             CGTTCAGGCGGCATC  49 29
        trmL  190269 ..  190287 -  -5.9  -2.88579   GTAAGCGTTGACAGA             CGCGCCA TTGGC CAGCGCG             CCGCTACGCTGTTGG  51 188
HF553_RS00895  187837 ..  187855 - -11.7   -3.1352   CTGTAAGGTAAGAGA             GGCGGGA CGGAT TCCCGCC             AGTCGGGTTAAGGGC  83 33
HF553_RS00890  186419 ..  186452 -  -8.3  -5.32944   GGTACAACTAAAAAA    CGCTGTTCCGATGGA GTGCAA TCC--CGGAACAGCG     GAGCGAAGAATTCGC 100 52
        gpmM NONE
        envC NONE
HF553_RS00850  179059 ..  179074 -  -4.6  -3.57144   GTCCGCAGCGCGAAA              GCGGCT TATC AGACGC               TGATCTGGTCCTTCC  52 98
        rfaD NONE
        rfaF NONE
        rfaC NONE
        rfaL  171176 ..  171205 - -14.4  -4.21194   CCTGATGATGGAAAA       CGCGCTGATACC GTAATA AGTATCAGCGCG        TTTTTTTATCTATTT 100 31
        waaA NONE
        coaD  158809 ..  158821 -  -9.1  -3.91352   ATAGTCGCAACGAAA                CACGC ACA GCGTG                CGACGTTCTATTGCC  73 85
       coaBC NONE
         dut  154754 ..  154774 -    -9  -3.33492   GCACCCACGCTATAA            CCGCAAAC TCAGC GCTTGCGG            CAGTATTATGACGTT  71 58
        slmA  153941 ..  153957 -  -2.2  -3.36991   CATTACGCTGAAAGA              CCTGAT TGCCT ATCTGG              AAGAAAAACCTGATA  45 171
HF553_RS00705  151552 ..  151581 -   -10  -3.93695   CGTACTACCGATAAA       CGCGAGAGCCCGC ATAAG GCGGGCTCT-GTG       ACATATTGAGCGCCA  82 44
HF553_RS00695  149658 ..  149676 -  -8.8  -4.27465   GATAATTTAAAAGAA             CGGCGC CCTGGAC GCGCCG             CCGGTGAGTTATTTC  80 42
HF553_RS00690  148779 ..  148806 -  -9.2   -2.8978   ATCTGCAGATCAAAG        CGCTGAGCAG ATGGCTGG CTGCTCAGCA         TATTCCCGGATTTGG  67 44
         gmk  146251 ..  146266 -  -3.3  -2.78816   TGACTGGGCATGATA              CTGAA AGTGGG TTCAG               TCTGCCAACAATTTG  43 22
        rpoZ  145916 ..  145926 -  -2.4  -2.83082   TCAAACAGATACAAG                 GGCG ACC CGCT                 TTGTGATTAACGACG  40 32
        spoT NONE
        trmH NONE
        recG  140988 ..  141023 -  -4.5  -2.76696   TTTTCGCGCAATAAG    GGTTTGTACGGCGGC ATTAAA GCCGCCGTGCTCACT     AGGCGTTGGAATAAC  47 24
        xanP  138132 ..  138151 - -10.7  -2.63479   AAGAGCGTTACAGCA            GCGGCGA ATCGTG TCGCCGC             CGCAGGGTTTTTACG  74 36
HF553_RS00645  135912 ..  135934 -  -4.8  -3.17146   GTGCGTGACAATACA           CTACTGGCGC TGG GCAACAATAG           CCAGAAGCCCGATTA  49 423
HF553_RS00630 NONE
HF553_RS00625  130593 ..  130617 -  -7.1  -5.15682   AAAACATAAATAAAA          CCATACGGC TTTTGGG GCCGGATGG          TTATTCATTATTTTT  86 62
HF553_RS00560  112389 ..  112416 -  -5.6  -4.22009   AGTATCGAAGATAAA        CCAC-GCCCTG TACCTGC CAGAGCTGTGG        TTTGTATTTACTGAA  67 93
HF553_RS00555  111840 ..  111851 -  -5.8  -2.65476   AGCACGCAGCAGAAT                GCCT CCGG AGGC                 CGGATAGTGTATTCG  50 69
HF553_RS00550  110866 ..  110885 -  -6.4  -2.86349   ACCAACAGAATACCA            CGTCAGTC TATC GACTGAAG             GTGTCACCTGTTTCT  55 377
HF553_RS00540  107967 ..  107992 -  -8.2  -5.06052   TGAAAAAAGACAAAA         CCCCGCGCACC GGAAA GGAG-GCGGGG         GAACCACGGAGATAA  87 80
HF553_RS00535  106724 ..  106751 - -17.8  -5.45652   AGGGTGAATAAAAAA        GCCGGTACCCAC AAAA GTGGATACCGGC         AGATACAAAACAGCA 100 339
        ag43  103852 ..  103870 -  -2.3  -3.28791   ATGGTTCTGTCAGAA             GGTCACA TTCAG CGTGGCC             TGACCGTTATAGCCT  45 1
HF553_RS00525  101174 ..  101191 -    -2  -3.59738   GATGACACTGGCAAA             TCAGGT GATAAA ACCTAA              AAGGAGCAGAACACA  49 43
HF553_RS00520  100626 ..  100652 - -18.8  -5.38054   CCTGATAAATAAAAA         GCCTCTGCCACA AAG CGTGGCAGAGGC         TAAATCATGAAACTG 100 51
HF553_RS00515  100317 ..  100342 - -16.9  -5.04601   GGTATAAATGAAAAA         GCCGCGTCTCC CGGA GAAGACGCGGC          CTGACAGATGAAATG 100 49
HF553_RS00510   99454 ..   99467 -  -2.4  -3.10597   GCTTTCAGGGAAAAG               GCAT CAGCGC ATGC                TCTCCAGCAGTGTTT  42 15
HF553_RS00505 NONE
HF553_RS00500 NONE
HF553_RS00495 NONE
HF553_RS00490 NONE
HF553_RS00485 NONE
HF553_RS00480 NONE
HF553_RS00475   96442 ..   96464 -  -9.1  -4.61873   GTTTATAAACGAAAA           CGCCAGCCC TGTTC AGGCTGACG           TCAGTGGAATGAAGT  90 55
HF553_RS00470   95355 ..   95365 -    -4  -2.96712   AGTCTTAATAATAAG                 CAAA TAC TTTG                 TCCCGAAATAGAGGA  46 227
HF553_RS00455   93603 ..   93618 -  -3.3  -3.46602   CTCCTGATACCATAA              TCTTG CCGTGC CAAGA               TAAAGCATGAGCGGG  50 88
HF553_RS00450 NONE
HF553_RS00445   92150 ..   92167 -  -5.5  -2.91593   TACGCCTGGATAAAG             CCGCCAT ATTC ACGACGG              TATCATGCAATCACA  51 167
HF553_RS00435 NONE
        misL   87410 ..   87428 - -14.6  -4.07568   CGTTTCCGGGTAAAA             GCCGCTGA AGA TCAGCGGC             TCTGTTGTTACCTGA 100 42
HF553_RS00410   84512 ..   84532 - -14.1  -4.43911   AAATGGCAAGTAAAA            TAGCCCCAT TAA ATGGGGCTA            TTTAGTCTCTTCAGG 100 48
HF553_RS00385   78010 ..   78037 -  -9.2  -2.71763   CGGATAACGAGATTA        TGCAGCATCGACG TAT CG-CGATGCTGGA        GCTGGTACAAAAGCA  60 468
HF553_RS00340 NONE
HF553_RS00335   67351 ..   67364 -  -3.7   -4.0896   AAACGTTCGGTAAAA               CTGGC GCTG GCCGG                TGCGCCGCTGCTACT  60 422
HF553_RS00325 NONE
HF553_RS00320   65281 ..   65300 -  -2.2  -5.01497   ATGATTAGACAAAAA            GTACGCGTT ATG AACA-GTAC            GGGGCTTCATGCGCG  74 351
HF553_RS00240   48953 ..   48969 -  -2.2  -3.54158   GATTTGAATAACGAA              GCCG ATCCGCAGG CGGC              GTTGCAGGCTATCAT  47 442
        tisB   46430 ..   46451 - -17.3  -3.69354   GCGGATAAGGTGAAA           GGGGAGCGG TTGC CCGCTCCCC            TTCGGTGCGGCTTGA 100 48
HF553_RS00210   45468 ..   45487 -  -7.8  -4.92385   GATATGTAAACAAAA            GCGGCAAC AAAT GTTGCCGA             GAATGTGTTACGTCT  87 59
        emrD   44104 ..   44124 - -15.4  -3.66178   CGCCGGAATGTGAAA            CGCCCGGC AAAAA GCCGGGCG            AGGGGAACGTTAAAC 100 35
        dsdX NONE
        dsdA   39168 ..   39208 -    -9  -3.30771   TTACAGGCCTGATAA GCGTAGCGCCATCAGGC GATGGCGT GCCGGATGGCGCTGC-C  GTCTTTCCGGCACTG  71 49
HF553_RS00150   33997 ..   34026 - -10.7   -3.6707   ATGGAAGAGGTGAAA       GGGTTCCGTCAGC TATG GGTGACGGAAACC        GGGCGATAAATCAGG  83 36
        torR   19242 ..   19276 -   -10  -3.15663   AGGCAGCGCCATCAA     CATTGTGGATATCGCC TGG GGCGATAACGACATTG     AAGTGCAGCGAAACT  67 399
        torS   15422 ..   15453 -  -3.6  -5.03747   AAACTGGTGAAAAAA      GGCTTCTCGCTGGGC GTG GCGC-GCAAAACGCC      GATTATTTGCGGTTT  77 394
HF553_RS00035 NONE
HF553_RS00030    7167 ..    7195 -  -7.3  -2.54801   GACTCGCAAATACAG        GGTGTCTGCCTGC GGC GCAGGCAGACTGT        TGGCTTATTTTACGG  57 30
HF553_RS00025    5867 ..    5883 - -12.3  -2.75992   TCTGATTGAAGAGGA              CGCGTTC ATC GAACGCG              GCGAGCGTCGCCAGC  72 319
