locus-tag class description AM354_RS00010 PF08003 Protein of unknown function (DUF1698) AM354_RS00015 PF13649 Methyltransferase domain AM354_RS00020 PF01124 MAPEG family AM354_RS00025 PF01904 Protein of unknown function DUF72 AM354_RS00030 PF00857 Isochorismatase family AM354_RS00040 PF00152 tRNA synthetases class II (D, K and N) AM354_RS00040 PF02938 GAD domain AM354_RS00040 PF01336 OB-fold nucleic acid binding domain AM354_RS00045 PF00293 NUDIX domain AM354_RS00050 PF01709 Transcriptional regulator AM354_RS00055 PF02075 Crossover junction endodeoxyribonuclease RuvC AM354_RS00060 PF01330 RuvA N terminal domain AM354_RS00060 PF07499 RuvA, C-terminal domain AM354_RS00065 PF05491 RuvB C-terminal winged helix domain AM354_RS00065 PF17864 RuvB AAA lid domain AM354_RS00065 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM354_RS00070 PF00950 ABC 3 transport family AM354_RS00075 PF00005 ABC transporter AM354_RS00080 PF01297 Zinc-uptake complex component A periplasmic AM354_RS00085 PF08525 Opacity-associated protein A N-terminal motif AM354_RS00085 PF01551 Peptidase family M23 AM354_RS00085 PF01476 LysM domain AM354_RS00090 PF03279 Bacterial lipid A biosynthesis acyltransferase AM354_RS00100 PF00224 Pyruvate kinase, barrel domain AM354_RS00100 PF02887 Pyruvate kinase, alpha/beta domain AM354_RS00105 PF01418 Helix-turn-helix domain, rpiR family AM354_RS00105 PF01380 SIS domain AM354_RS00110 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM354_RS00110 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM354_RS00115 PF01081 KDPG and KHG aldolase AM354_RS00120 PF00893 Small Multidrug Resistance protein AM354_RS00125 PF00893 Small Multidrug Resistance protein AM354_RS00130 PF01042 Endoribonuclease L-PSP AM354_RS00135 PF13307 Helicase C-terminal domain AM354_RS00135 PF04851 Type III restriction enzyme, res subunit AM354_RS00140 PF00814 Glycoprotease family AM354_RS00145 PF03843 Outer membrane lipoprotein Slp family AM354_RS00150 PF00501 AMP-binding enzyme AM354_RS00150 PF13193 AMP-binding enzyme C-terminal domain AM354_RS00155 PF01612 3'-5' exonuclease AM354_RS00155 PF00570 HRDC domain AM354_RS00160 PF03776 Septum formation topological specificity factor MinE AM354_RS00165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM354_RS00170 PF05209 Septum formation inhibitor MinC, N-terminal domain AM354_RS00170 PF03775 Septum formation inhibitor MinC, C-terminal domain AM354_RS00175 PF05166 YcgL domain AM354_RS00180 PF13406 Transglycosylase SLT domain AM354_RS00185 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM354_RS00190 PF03692 Putative zinc- or iron-chelating domain AM354_RS00195 PF02600 Disulfide bond formation protein DsbB AM354_RS00200 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AM354_RS00205 PF00392 Bacterial regulatory proteins, gntR family AM354_RS00205 PF07840 FadR C-terminal domain AM354_RS00210 PF04293 SpoVR like protein AM354_RS00215 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AM354_RS00225 PF01266 FAD dependent oxidoreductase AM354_RS00230 PF00842 Alanine racemase, C-terminal domain AM354_RS00230 PF01168 Alanine racemase, N-terminal domain AM354_RS00235 PF07690 Major Facilitator Superfamily AM354_RS00260 PF10753 Toxin GhoT_OrtT AM354_RS00280 PF04285 Protein of unknown function (DUF444) AM354_RS00285 PF06798 PrkA serine protein kinase C-terminal domain AM354_RS00285 PF08298 PrkA AAA domain AM354_RS00290 PF06629 MltA-interacting protein MipA AM354_RS00295 PF01263 Aldose 1-epimerase AM354_RS00300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM354_RS00300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM354_RS00305 PF01641 SelR domain AM354_RS00310 PF07023 Protein of unknown function (DUF1315) AM354_RS00315 PF00704 Glycosyl hydrolases family 18 AM354_RS00315 PF00041 Fibronectin type III domain AM354_RS00320 PF00857 Isochorismatase family AM354_RS00325 PF17763 Glutaminase/Asparaginase C-terminal domain AM354_RS00325 PF00710 Asparaginase, N-terminal AM354_RS00330 PF01343 Peptidase family S49 AM354_RS00335 PF00881 Nitroreductase family AM354_RS00340 PF02769 AIR synthase related protein, C-terminal domain AM354_RS00340 PF00586 AIR synthase related protein, N-terminal domain AM354_RS00350 PF01751 Toprim domain AM354_RS00350 PF01131 DNA topoisomerase AM354_RS00355 PF07383 Protein of unknown function (DUF1496) AM354_RS00360 PF00293 NUDIX domain AM354_RS00365 PF03372 Endonuclease/Exonuclease/phosphatase family AM354_RS00370 PF03641 Possible lysine decarboxylase AM354_RS00395 PF01842 ACT domain AM354_RS00395 PF00551 Formyl transferase AM354_RS00400 PF02810 SEC-C motif AM354_RS00405 PF01734 Patatin-like phospholipase AM354_RS00410 PF00072 Response regulator receiver domain AM354_RS00415 PF00483 Nucleotidyl transferase AM354_RS00420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM354_RS00420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM354_RS00420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM354_RS00425 PF01370 NAD dependent epimerase/dehydratase family AM354_RS00430 PF00816 H-NS histone family AM354_RS00435 PF00265 Thymidine kinase AM354_RS00440 PF00465 Iron-containing alcohol dehydrogenase AM354_RS00440 PF00171 Aldehyde dehydrogenase family AM354_RS00445 PF01914 MarC family integral membrane protein AM354_RS00450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS00455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS00460 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS00465 PF12911 N-terminal TM domain of oligopeptide transport permease C AM354_RS00465 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS00470 PF00005 ABC transporter AM354_RS00470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM354_RS00475 PF00005 ABC transporter AM354_RS00475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM354_RS00480 PF04269 Protein of unknown function, DUF440 AM354_RS00485 PF13396 Phospholipase_D-nuclease N-terminal AM354_RS00485 PF13091 PLD-like domain AM354_RS00495 PF00210 Ferritin-like domain AM354_RS00505 PF00440 Bacterial regulatory proteins, tetR family AM354_RS00510 PF13407 Periplasmic binding protein domain AM354_RS00515 PF02653 Branched-chain amino acid transport system / permease component AM354_RS00520 PF00005 ABC transporter AM354_RS00525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM354_RS00525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM354_RS00530 PF00107 Zinc-binding dehydrogenase AM354_RS00530 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS00535 PF07385 D-lyxose isomerase AM354_RS00540 PF00356 Bacterial regulatory proteins, lacI family AM354_RS00550 PF03466 LysR substrate binding domain AM354_RS00550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS00665 PF00182 Chitinase class I AM354_RS00745 PF01464 Transglycosylase SLT domain AM354_RS00765 PF00717 Peptidase S24-like AM354_RS00770 PF03795 YCII-related domain AM354_RS00775 PF02677 Epoxyqueuosine reductase QueH AM354_RS00780 PF03544 Gram-negative bacterial TonB protein C-terminal AM354_RS00785 PF03061 Thioesterase superfamily AM354_RS00790 PF04279 Intracellular septation protein A AM354_RS00795 PF00916 Sulfate permease family AM354_RS00795 PF01740 STAS domain AM354_RS00805 PF03692 Putative zinc- or iron-chelating domain AM354_RS00810 PF03922 OmpW family AM354_RS00820 PF00290 Tryptophan synthase alpha chain AM354_RS00825 PF00291 Pyridoxal-phosphate dependent enzyme AM354_RS00830 PF00218 Indole-3-glycerol phosphate synthase AM354_RS00830 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM354_RS00835 PF00591 Glycosyl transferase family, a/b domain AM354_RS00835 PF02885 Glycosyl transferase family, helical bundle domain AM354_RS00840 PF00117 Glutamine amidotransferase class-I AM354_RS00845 PF04715 Anthranilate synthase component I, N terminal region AM354_RS00845 PF00425 chorismate binding enzyme AM354_RS00850 PF02811 PHP domain AM354_RS00855 PF01300 Telomere recombination AM354_RS00865 PF00561 alpha/beta hydrolase fold AM354_RS00870 PF00849 RNA pseudouridylate synthase AM354_RS00870 PF01479 S4 domain AM354_RS00875 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM354_RS00875 PF12557 Cob(I)alamin adenosyltransferase N terminal AM354_RS00880 PF00106 short chain dehydrogenase AM354_RS00885 PF01343 Peptidase family S49 AM354_RS00885 PF08496 Peptidase family S49 N-terminal AM354_RS00890 PF10692 Protein of unknown function (DUF2498) AM354_RS00895 PF01131 DNA topoisomerase AM354_RS00895 PF01751 Toprim domain AM354_RS00895 PF01396 Topoisomerase DNA binding C4 zinc finger AM354_RS00895 PF08272 Topoisomerase I zinc-ribbon-like AM354_RS00900 PF03466 LysR substrate binding domain AM354_RS00900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS00905 PF00694 Aconitase C-terminal domain AM354_RS00905 PF00330 Aconitase family (aconitate hydratase) AM354_RS00910 PF00925 GTP cyclohydrolase II AM354_RS00915 PF01569 PAP2 superfamily AM354_RS00920 PF08220 DeoR-like helix-turn-helix domain AM354_RS00920 PF00455 DeoR C terminal sensor domain AM354_RS00925 PF00456 Transketolase, thiamine diphosphate binding domain AM354_RS00930 PF02780 Transketolase, C-terminal domain AM354_RS00930 PF02779 Transketolase, pyrimidine binding domain AM354_RS00940 PF13407 Periplasmic binding protein domain AM354_RS00950 PF00005 ABC transporter AM354_RS00955 PF02653 Branched-chain amino acid transport system / permease component AM354_RS00960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM354_RS00960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM354_RS00970 PF06305 Lipopolysaccharide assembly protein A domain AM354_RS00975 PF18073 Rubredoxin metal binding domain AM354_RS00990 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM354_RS00995 PF01253 Translation initiation factor SUI1 AM354_RS01000 PF05433 Glycine zipper 2TM domain AM354_RS01005 PF00455 DeoR C terminal sensor domain AM354_RS01005 PF08220 DeoR-like helix-turn-helix domain AM354_RS01010 PF01228 Glycine radical AM354_RS01010 PF02901 Pyruvate formate lyase-like AM354_RS01015 PF04055 Radical SAM superfamily AM354_RS01020 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM354_RS01025 PF17287 POTRA domain AM354_RS01025 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM354_RS01025 PF08479 POTRA domain, ShlB-type AM354_RS01045 PF13332 Hemagglutinin repeat AM354_RS01045 PF04829 Pre-toxin domain with VENN motif AM354_RS01045 PF05594 Haemagluttinin repeat AM354_RS01065 PF05860 haemagglutination activity domain AM354_RS01065 PF05594 Haemagluttinin repeat AM354_RS01065 PF04829 Pre-toxin domain with VENN motif AM354_RS01065 PF13332 Hemagglutinin repeat AM354_RS01090 PF15526 Novel toxin 21 AM354_RS01090 PF04829 Pre-toxin domain with VENN motif AM354_RS01090 PF05594 Haemagluttinin repeat AM354_RS01090 PF13332 Hemagglutinin repeat AM354_RS01090 PF05860 haemagglutination activity domain AM354_RS01110 PF13722 5TM C-terminal transporter carbon starvation CstA AM354_RS01110 PF02554 Carbon starvation protein CstA AM354_RS01115 PF01546 Peptidase family M20/M25/M40 AM354_RS01115 PF07687 Peptidase dimerisation domain AM354_RS01120 PF07690 Major Facilitator Superfamily AM354_RS01125 PF08206 Ribonuclease B OB domain AM354_RS01125 PF00773 RNB domain AM354_RS01125 PF00575 S1 RNA binding domain AM354_RS01130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM354_RS01135 PF03466 LysR substrate binding domain AM354_RS01135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS01140 PF00384 Molybdopterin oxidoreductase AM354_RS01145 PF07943 Penicillin-binding protein 5, C-terminal domain AM354_RS01145 PF00768 D-alanyl-D-alanine carboxypeptidase AM354_RS01150 PF03466 LysR substrate binding domain AM354_RS01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS01170 PF00005 ABC transporter AM354_RS01175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM354_RS01175 PF00005 ABC transporter AM354_RS01180 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS01180 PF12911 N-terminal TM domain of oligopeptide transport permease C AM354_RS01185 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS01190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS01195 PF02649 Type I GTP cyclohydrolase folE2 AM354_RS01200 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS01205 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM354_RS01205 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM354_RS01220 PF00158 Sigma-54 interaction domain AM354_RS01220 PF02954 Bacterial regulatory protein, Fis family AM354_RS01225 PF04012 PspA/IM30 family AM354_RS01230 PF06667 Phage shock protein B AM354_RS01235 PF04024 PspC domain AM354_RS01240 PF09584 Phage shock protein PspD (Phageshock_PspD) AM354_RS01245 PF04317 YcjX-like family, DUF463 AM354_RS01250 PF05128 Domain of unknown function (DUF697) AM354_RS01255 PF18024 Helix-turn-helix domain AM354_RS01255 PF00158 Sigma-54 interaction domain AM354_RS01260 PF08534 Redoxin AM354_RS01265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM354_RS01265 PF13378 Enolase C-terminal domain-like AM354_RS01270 PF00246 Zinc carboxypeptidase AM354_RS01280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS01300 PF01544 CorA-like Mg2+ transporter protein AM354_RS01310 PF01171 PP-loop family AM354_RS01315 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AM354_RS01315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS01315 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AM354_RS01315 PF10371 Domain of unknown function AM354_RS01315 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AM354_RS01320 PF00893 Small Multidrug Resistance protein AM354_RS01325 PF03891 Domain of unknown function (DUF333) AM354_RS01330 PF03724 META domain AM354_RS01335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM354_RS01335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM354_RS01350 PF11739 Dicarboxylate transport AM354_RS01355 PF13617 YnbE-like lipoprotein AM354_RS01360 PF07027 Protein of unknown function (DUF1318) AM354_RS01365 PF02525 Flavodoxin-like fold AM354_RS01370 PF04408 Helicase associated domain (HA2) AM354_RS01370 PF00270 DEAD/DEAH box helicase AM354_RS01370 PF11898 Domain of unknown function (DUF3418) AM354_RS01370 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM354_RS01370 PF00271 Helicase conserved C-terminal domain AM354_RS01375 PF00440 Bacterial regulatory proteins, tetR family AM354_RS01385 PF00171 Aldehyde dehydrogenase family AM354_RS01390 PF00089 Trypsin AM354_RS01400 PF00561 alpha/beta hydrolase fold AM354_RS01405 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AM354_RS01410 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS01410 PF00672 HAMP domain AM354_RS01415 PF00486 Transcriptional regulatory protein, C terminal AM354_RS01415 PF00072 Response regulator receiver domain AM354_RS01440 PF13520 Amino acid permease AM354_RS01445 PF07338 Protein of unknown function (DUF1471) AM354_RS01450 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM354_RS01450 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM354_RS01450 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM354_RS01455 PF02233 NAD(P) transhydrogenase beta subunit AM354_RS01460 PF00582 Universal stress protein family AM354_RS01465 PF00027 Cyclic nucleotide-binding domain AM354_RS01465 PF13545 Crp-like helix-turn-helix domain AM354_RS01470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM354_RS01470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM354_RS01480 PF01116 Fructose-bisphosphate aldolase class-II AM354_RS01485 PF01380 SIS domain AM354_RS01500 PF07317 Flagellar regulator YcgR AM354_RS01500 PF07238 PilZ domain AM354_RS01505 PF08543 Phosphomethylpyrimidine kinase AM354_RS01510 PF00117 Glutamine amidotransferase class-I AM354_RS01520 PF00155 Aminotransferase class I and II AM354_RS01520 PF00392 Bacterial regulatory proteins, gntR family AM354_RS01525 PF00296 Luciferase-like monooxygenase AM354_RS01530 PF00768 D-alanyl-D-alanine carboxypeptidase AM354_RS01535 PF00293 NUDIX domain AM354_RS01540 PF03976 Polyphosphate kinase 2 (PPK2) AM354_RS01545 PF01384 Phosphate transporter family AM354_RS01565 PF07687 Peptidase dimerisation domain AM354_RS01565 PF01546 Peptidase family M20/M25/M40 AM354_RS01575 PF13458 Periplasmic binding protein AM354_RS01580 PF00005 ABC transporter AM354_RS01585 PF00005 ABC transporter AM354_RS01585 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM354_RS01590 PF02653 Branched-chain amino acid transport system / permease component AM354_RS01590 PF11862 Domain of unknown function (DUF3382) AM354_RS01595 PF02653 Branched-chain amino acid transport system / permease component AM354_RS01600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS01600 PF03466 LysR substrate binding domain AM354_RS01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS01615 PF03466 LysR substrate binding domain AM354_RS01630 PF00561 alpha/beta hydrolase fold AM354_RS01635 PF07859 alpha/beta hydrolase fold AM354_RS01640 PF00171 Aldehyde dehydrogenase family AM354_RS01650 PF00892 EamA-like transporter family AM354_RS01655 PF00679 Elongation factor G C-terminus AM354_RS01655 PF14492 Elongation Factor G, domain II AM354_RS01655 PF03764 Elongation factor G, domain IV AM354_RS01655 PF03144 Elongation factor Tu domain 2 AM354_RS01655 PF00009 Elongation factor Tu GTP binding domain AM354_RS01665 PF00561 alpha/beta hydrolase fold AM354_RS01670 PF00005 ABC transporter AM354_RS01675 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS01695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS01700 PF00571 CBS domain AM354_RS01700 PF01769 Divalent cation transporter AM354_RS01700 PF03448 MgtE intracellular N domain AM354_RS01710 PF01545 Cation efflux family AM354_RS01710 PF16916 Dimerisation domain of Zinc Transporter AM354_RS01715 PF00459 Inositol monophosphatase family AM354_RS01720 PF00873 AcrB/AcrD/AcrF family AM354_RS01725 PF13977 BetI-type transcriptional repressor, C-terminal AM354_RS01725 PF00440 Bacterial regulatory proteins, tetR family AM354_RS01730 PF12848 ABC transporter AM354_RS01730 PF00005 ABC transporter AM354_RS01735 PF12795 Mechanosensitive ion channel porin domain AM354_RS01735 PF00924 Mechanosensitive ion channel AM354_RS01735 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM354_RS01750 PF00083 Sugar (and other) transporter AM354_RS01755 PF00892 EamA-like transporter family AM354_RS01760 PF00701 Dihydrodipicolinate synthetase family AM354_RS01765 PF00171 Aldehyde dehydrogenase family AM354_RS01790 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS01795 PF07237 Protein of unknown function (DUF1428) AM354_RS01805 PF00291 Pyridoxal-phosphate dependent enzyme AM354_RS01810 PF07690 Major Facilitator Superfamily AM354_RS01815 PF01494 FAD binding domain AM354_RS01820 PF00232 Glycosyl hydrolase family 1 AM354_RS01825 PF01418 Helix-turn-helix domain, rpiR family AM354_RS01825 PF01380 SIS domain AM354_RS01830 PF01799 [2Fe-2S] binding domain AM354_RS01830 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS01835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM354_RS01835 PF00034 Cytochrome c AM354_RS01835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM354_RS01840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM354_RS01840 PF00034 Cytochrome c AM354_RS01840 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM354_RS01845 PF00881 Nitroreductase family AM354_RS01855 PF08671 Anti-repressor SinI AM354_RS01855 PF01381 Helix-turn-helix AM354_RS01870 PF04346 Ethanolamine utilisation protein, EutH AM354_RS01875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM354_RS01875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM354_RS01880 PF01266 FAD dependent oxidoreductase AM354_RS01885 PF04324 BFD-like [2Fe-2S] binding domain AM354_RS01885 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS01890 PF08220 DeoR-like helix-turn-helix domain AM354_RS01890 PF00455 DeoR C terminal sensor domain AM354_RS01895 PF00384 Molybdopterin oxidoreductase AM354_RS01905 PF03466 LysR substrate binding domain AM354_RS01905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS01910 PF04371 Porphyromonas-type peptidyl-arginine deiminase AM354_RS01920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS01920 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS01925 PF00873 AcrB/AcrD/AcrF family AM354_RS01930 PF02321 Outer membrane efflux protein AM354_RS01930 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM354_RS01945 PF09278 MerR, DNA binding AM354_RS01945 PF00376 MerR family regulatory protein AM354_RS01950 PF00403 Heavy-metal-associated domain AM354_RS01955 PF02321 Outer membrane efflux protein AM354_RS01960 PF00873 AcrB/AcrD/AcrF family AM354_RS01965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS01965 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS01970 PF01965 DJ-1/PfpI family AM354_RS01975 PF00501 AMP-binding enzyme AM354_RS01975 PF13193 AMP-binding enzyme C-terminal domain AM354_RS01980 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM354_RS01980 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM354_RS01985 PF13309 HTH domain AM354_RS01985 PF08348 YheO-like PAS domain AM354_RS01990 PF00593 TonB dependent receptor AM354_RS01990 PF07715 TonB-dependent Receptor Plug Domain AM354_RS01995 PF00756 Putative esterase AM354_RS01995 PF11806 Domain of unknown function (DUF3327) AM354_RS02000 PF03621 MbtH-like protein AM354_RS02005 PF13193 AMP-binding enzyme C-terminal domain AM354_RS02005 PF00668 Condensation domain AM354_RS02005 PF00550 Phosphopantetheine attachment site AM354_RS02005 PF00501 AMP-binding enzyme AM354_RS02010 PF05977 Transmembrane secretion effector AM354_RS02015 PF01638 HxlR-like helix-turn-helix AM354_RS02020 PF02525 Flavodoxin-like fold AM354_RS02040 PF07995 Glucose / Sorbosone dehydrogenase AM354_RS02050 PF04073 Aminoacyl-tRNA editing domain AM354_RS02075 PF00356 Bacterial regulatory proteins, lacI family AM354_RS02080 PF13407 Periplasmic binding protein domain AM354_RS02085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM354_RS02085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM354_RS02090 PF01261 Xylose isomerase-like TIM barrel AM354_RS02095 PF14824 Sirohaem biosynthesis protein central AM354_RS02095 PF10414 Sirohaem synthase dimerisation region AM354_RS02095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM354_RS02100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM354_RS02100 PF04324 BFD-like [2Fe-2S] binding domain AM354_RS02100 PF01568 Molydopterin dinucleotide binding domain AM354_RS02100 PF00384 Molybdopterin oxidoreductase AM354_RS02105 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM354_RS02105 PF04324 BFD-like [2Fe-2S] binding domain AM354_RS02105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM354_RS02105 PF13806 Rieske-like [2Fe-2S] domain AM354_RS02105 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS02105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM354_RS02110 PF00005 ABC transporter AM354_RS02115 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS02125 PF08376 Nitrate and nitrite sensing AM354_RS02125 PF03861 ANTAR domain AM354_RS02130 PF13091 PLD-like domain AM354_RS02155 PF08447 PAS fold AM354_RS02155 PF08448 PAS fold AM354_RS02155 PF13426 PAS domain AM354_RS02155 PF00563 EAL domain AM354_RS02155 PF05231 MASE1 AM354_RS02155 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS02160 PF13411 MerR HTH family regulatory protein AM354_RS02165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM354_RS02165 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS02170 PF00202 Aminotransferase class-III AM354_RS02175 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM354_RS02180 PF03466 LysR substrate binding domain AM354_RS02180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS02185 PF01244 Membrane dipeptidase (Peptidase family M19) AM354_RS02190 PF08042 PqqA family AM354_RS02195 PF12706 Beta-lactamase superfamily domain AM354_RS02200 PF03070 TENA/THI-4/PQQC family AM354_RS02205 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AM354_RS02210 PF13186 Iron-sulfur cluster-binding domain AM354_RS02210 PF04055 Radical SAM superfamily AM354_RS02215 PF00675 Insulinase (Peptidase family M16) AM354_RS02220 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM354_RS02225 PF00171 Aldehyde dehydrogenase family AM354_RS02230 PF00296 Luciferase-like monooxygenase AM354_RS02235 PF01613 Flavin reductase like domain AM354_RS02240 PF12697 Alpha/beta hydrolase family AM354_RS02250 PF00392 Bacterial regulatory proteins, gntR family AM354_RS02250 PF07729 FCD domain AM354_RS02260 PF02974 Protease inhibitor Inh AM354_RS02265 PF08548 Peptidase M10 serralysin C terminal AM354_RS02265 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM354_RS02265 PF00413 Matrixin AM354_RS02270 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS02270 PF03707 Bacterial signalling protein N terminal repeat AM354_RS02270 PF00563 EAL domain AM354_RS02275 PF07690 Major Facilitator Superfamily AM354_RS02280 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS02285 PF01590 GAF domain AM354_RS02285 PF02954 Bacterial regulatory protein, Fis family AM354_RS02285 PF00158 Sigma-54 interaction domain AM354_RS02290 PF00171 Aldehyde dehydrogenase family AM354_RS02295 PF00107 Zinc-binding dehydrogenase AM354_RS02295 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS02300 PF00753 Metallo-beta-lactamase superfamily AM354_RS02300 PF04273 Putative phosphatase (DUF442) AM354_RS02305 PF01925 Sulfite exporter TauE/SafE AM354_RS02310 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS02310 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding AM354_RS02310 PF10518 TAT (twin-arginine translocation) pathway signal sequence AM354_RS02325 PF03350 Uncharacterized protein family, UPF0114 AM354_RS02330 PF07977 FabA-like domain AM354_RS02350 PF07690 Major Facilitator Superfamily AM354_RS02355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM354_RS02355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM354_RS02360 PF08220 DeoR-like helix-turn-helix domain AM354_RS02360 PF00455 DeoR C terminal sensor domain AM354_RS02370 PF07690 Major Facilitator Superfamily AM354_RS02375 PF00144 Beta-lactamase AM354_RS02380 PF03466 LysR substrate binding domain AM354_RS02380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS02385 PF10766 Multidrug efflux pump-associated protein AcrZ AM354_RS02400 PF05433 Glycine zipper 2TM domain AM354_RS02405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM354_RS02405 PF00672 HAMP domain AM354_RS02405 PF02203 Tar ligand binding domain homologue AM354_RS02420 PF03717 Penicillin-binding Protein dimerisation domain AM354_RS02420 PF00905 Penicillin binding protein transpeptidase domain AM354_RS02425 PF00905 Penicillin binding protein transpeptidase domain AM354_RS02425 PF03717 Penicillin-binding Protein dimerisation domain AM354_RS02430 PF15940 Family of unknown function AM354_RS02440 PF07690 Major Facilitator Superfamily AM354_RS02460 PF12833 Helix-turn-helix domain AM354_RS02470 PF02567 Phenazine biosynthesis-like protein AM354_RS02505 PF00561 alpha/beta hydrolase fold AM354_RS02515 PF08548 Peptidase M10 serralysin C terminal AM354_RS02515 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM354_RS02515 PF00413 Matrixin AM354_RS02520 PF02974 Protease inhibitor Inh AM354_RS02535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS02535 PF03466 LysR substrate binding domain AM354_RS02540 PF00190 Cupin AM354_RS02545 PF00034 Cytochrome c AM354_RS02545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM354_RS02550 PF01799 [2Fe-2S] binding domain AM354_RS02550 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS02555 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM354_RS02565 PF03576 Peptidase family S58 AM354_RS02570 PF03412 Peptidase C39 family AM354_RS02570 PF00005 ABC transporter AM354_RS02570 PF00664 ABC transporter transmembrane region AM354_RS02575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS02575 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS02580 PF12919 TcdA/TcdB catalytic glycosyltransferase domain AM354_RS02580 PF11713 Peptidase C80 family AM354_RS02580 PF01473 Putative cell wall binding repeat AM354_RS02580 PF12918 TcdB toxin N-terminal helical domain AM354_RS02580 PF12920 TcdA/TcdB pore forming domain AM354_RS02600 PF03466 LysR substrate binding domain AM354_RS02600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS02605 PF00561 alpha/beta hydrolase fold AM354_RS02610 PF00034 Cytochrome c AM354_RS02610 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM354_RS02610 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM354_RS02615 PF01799 [2Fe-2S] binding domain AM354_RS02615 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS02620 PF12802 MarR family AM354_RS02630 PF01494 FAD binding domain AM354_RS02635 PF00561 alpha/beta hydrolase fold AM354_RS02640 PF17645 Arylmalonate decarboxylase AM354_RS02645 PF00857 Isochorismatase family AM354_RS02650 PF07690 Major Facilitator Superfamily AM354_RS02655 PF01432 Peptidase family M3 AM354_RS02665 PF01979 Amidohydrolase family AM354_RS02670 PF08281 Sigma-70, region 4 AM354_RS02670 PF04542 Sigma-70 region 2 AM354_RS02675 PF16220 Domain of unknown function (DUF4880) AM354_RS02675 PF04773 FecR protein AM354_RS02680 PF00593 TonB dependent receptor AM354_RS02680 PF07660 Secretin and TonB N terminus short domain AM354_RS02680 PF07715 TonB-dependent Receptor Plug Domain AM354_RS02690 PF00106 short chain dehydrogenase AM354_RS02695 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM354_RS02700 PF06932 Protein of unknown function (DUF1283) AM354_RS02705 PF06649 Protein of unknown function (DUF1161) AM354_RS02710 PF07690 Major Facilitator Superfamily AM354_RS02715 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS02720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM354_RS02725 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS02730 PF00571 CBS domain AM354_RS02730 PF00005 ABC transporter AM354_RS02735 PF00654 Voltage gated chloride channel AM354_RS02740 PF09278 MerR, DNA binding AM354_RS02740 PF00376 MerR family regulatory protein AM354_RS02755 PF00480 ROK family AM354_RS02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS02760 PF03466 LysR substrate binding domain AM354_RS02765 PF07690 Major Facilitator Superfamily AM354_RS02770 PF02638 Glycosyl hydrolase-like 10 AM354_RS02775 PF00933 Glycosyl hydrolase family 3 N terminal domain AM354_RS02775 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM354_RS02780 PF05472 DNA replication terminus site-binding protein (Ter protein) AM354_RS02790 PF13280 WYL domain AM354_RS02790 PF08279 HTH domain AM354_RS02795 PF10415 Fumarase C C-terminus AM354_RS02795 PF00206 Lyase AM354_RS02805 PF01238 Phosphomannose isomerase type I AM354_RS02810 PF06097 Bacterial protein of unknown function (DUF945) AM354_RS02815 PF00144 Beta-lactamase AM354_RS02820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS02820 PF03466 LysR substrate binding domain AM354_RS02825 PF00144 Beta-lactamase AM354_RS02830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS02830 PF03466 LysR substrate binding domain AM354_RS02835 PF00356 Bacterial regulatory proteins, lacI family AM354_RS02835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM354_RS02840 PF00367 phosphotransferase system, EIIB AM354_RS02840 PF02378 Phosphotransferase system, EIIC AM354_RS02845 PF00155 Aminotransferase class I and II AM354_RS02855 PF00293 NUDIX domain AM354_RS02860 PF00455 DeoR C terminal sensor domain AM354_RS02860 PF08220 DeoR-like helix-turn-helix domain AM354_RS02865 PF00962 Adenosine/AMP deaminase AM354_RS02875 PF13593 SBF-like CPA transporter family (DUF4137) AM354_RS02880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM354_RS02880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM354_RS02885 PF10754 Protein of unknown function (DUF2569) AM354_RS02890 PF02508 Rnf-Nqr subunit, membrane protein AM354_RS02895 PF04060 Putative Fe-S cluster AM354_RS02900 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM354_RS02900 PF12838 4Fe-4S dicluster domain AM354_RS02900 PF10531 SLBB domain AM354_RS02900 PF13375 RnfC Barrel sandwich hybrid domain AM354_RS02905 PF06445 GyrI-like small molecule binding domain AM354_RS02905 PF12833 Helix-turn-helix domain AM354_RS02910 PF03116 NQR2, RnfD, RnfE family AM354_RS02915 PF04205 FMN-binding domain AM354_RS02920 PF02508 Rnf-Nqr subunit, membrane protein AM354_RS02925 PF00730 HhH-GPD superfamily base excision DNA repair protein AM354_RS02925 PF00633 Helix-hairpin-helix motif AM354_RS02925 PF10576 Iron-sulfur binding domain of endonuclease III AM354_RS02930 PF00854 POT family AM354_RS02935 PF00326 Prolyl oligopeptidase family AM354_RS02935 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM354_RS02940 PF01381 Helix-turn-helix AM354_RS02940 PF07883 Cupin domain AM354_RS02945 PF03594 Benzoate membrane transport protein AM354_RS02955 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM354_RS02960 PF01042 Endoribonuclease L-PSP AM354_RS02980 PF01966 HD domain AM354_RS02985 PF11656 YjbD family (DUF3811) AM354_RS02990 PF00701 Dihydrodipicolinate synthetase family AM354_RS02995 PF00043 Glutathione S-transferase, C-terminal domain AM354_RS02995 PF02798 Glutathione S-transferase, N-terminal domain AM354_RS03000 PF08543 Phosphomethylpyrimidine kinase AM354_RS03005 PF00579 tRNA synthetases class I (W and Y) AM354_RS03005 PF01479 S4 domain AM354_RS03010 PF01243 Pyridoxamine 5'-phosphate oxidase AM354_RS03010 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM354_RS03020 PF03702 Anhydro-N-acetylmuramic acid kinase AM354_RS03025 PF05433 Glycine zipper 2TM domain AM354_RS03030 PF01047 MarR family AM354_RS03035 PF07869 Protein of unknown function (DUF1656) AM354_RS03040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS03040 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS03045 PF04632 Fusaric acid resistance protein family AM354_RS03050 PF00080 Copper/zinc superoxide dismutase (SODC) AM354_RS03055 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM354_RS03060 PF00248 Aldo/keto reductase family AM354_RS03065 PF06945 Protein of unknown function (DUF1289) AM354_RS03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS03070 PF03466 LysR substrate binding domain AM354_RS03080 PF00884 Sulfatase AM354_RS03080 PF08019 Phosphoethanolamine transferase EptA/EptB AM354_RS03085 PF16925 Tetracyclin repressor-like, C-terminal domain AM354_RS03085 PF00440 Bacterial regulatory proteins, tetR family AM354_RS03090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM354_RS03095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM354_RS03100 PF00929 Exonuclease AM354_RS03105 PF00462 Glutaredoxin AM354_RS03110 PF00877 NlpC/P60 family AM354_RS03115 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM354_RS03115 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM354_RS03125 PF00356 Bacterial regulatory proteins, lacI family AM354_RS03130 PF03466 LysR substrate binding domain AM354_RS03130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS03135 PF07690 Major Facilitator Superfamily AM354_RS03150 PF00677 Lumazine binding domain AM354_RS03155 PF01554 MatE AM354_RS03180 PF00224 Pyruvate kinase, barrel domain AM354_RS03180 PF02887 Pyruvate kinase, alpha/beta domain AM354_RS03185 PF04728 Lipoprotein leucine-zipper AM354_RS03190 PF01476 LysM domain AM354_RS03190 PF03734 L,D-transpeptidase catalytic domain AM354_RS03190 PF17969 L,D-transpeptidase C-terminal domain AM354_RS03195 PF02657 Fe-S metabolism associated domain AM354_RS03200 PF00266 Aminotransferase class-V AM354_RS03205 PF01458 Uncharacterized protein family (UPF0051) AM354_RS03210 PF00005 ABC transporter AM354_RS03215 PF01458 Uncharacterized protein family (UPF0051) AM354_RS03220 PF01521 Iron-sulphur cluster biosynthesis AM354_RS03230 PF03061 Thioesterase superfamily AM354_RS03235 PF02913 FAD linked oxidases, C-terminal domain AM354_RS03235 PF13183 4Fe-4S dicluster domain AM354_RS03235 PF01565 FAD binding domain AM354_RS03240 PF01594 AI-2E family transporter AM354_RS03250 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM354_RS03250 PF02896 PEP-utilising enzyme, TIM barrel domain AM354_RS03250 PF00391 PEP-utilising enzyme, mobile domain AM354_RS03260 PF03618 Kinase/pyrophosphorylase AM354_RS03265 PF00793 DAHP synthetase I family AM354_RS03270 PF00255 Glutathione peroxidase AM354_RS03275 PF10636 Hemin uptake protein hemP AM354_RS03280 PF00593 TonB dependent receptor AM354_RS03280 PF07715 TonB-dependent Receptor Plug Domain AM354_RS03285 PF05171 Haemin-degrading HemS.ChuX domain AM354_RS03290 PF01497 Periplasmic binding protein AM354_RS03295 PF01032 FecCD transport family AM354_RS03300 PF00005 ABC transporter AM354_RS03305 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM354_RS03315 PF03099 Biotin/lipoate A/B protein ligase family AM354_RS03315 PF10437 Bacterial lipoate protein ligase C-terminus AM354_RS03320 PF00877 NlpC/P60 family AM354_RS03330 PF00892 EamA-like transporter family AM354_RS03335 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM354_RS03340 PF01522 Polysaccharide deacetylase AM354_RS03345 PF02911 Formyl transferase, C-terminal domain AM354_RS03345 PF00551 Formyl transferase AM354_RS03345 PF01370 NAD dependent epimerase/dehydratase family AM354_RS03350 PF00535 Glycosyl transferase family 2 AM354_RS03355 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM354_RS03360 PF00005 ABC transporter AM354_RS03365 PF00255 Glutathione peroxidase AM354_RS03370 PF01032 FecCD transport family AM354_RS03380 PF00216 Bacterial DNA-binding protein AM354_RS03385 PF03484 tRNA synthetase B5 domain AM354_RS03385 PF03483 B3/4 domain AM354_RS03385 PF03147 Ferredoxin-fold anticodon binding domain AM354_RS03385 PF01588 Putative tRNA binding domain AM354_RS03385 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM354_RS03390 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM354_RS03390 PF01409 tRNA synthetases class II core domain (F) AM354_RS03395 PF00453 Ribosomal protein L20 AM354_RS03400 PF01632 Ribosomal protein L35 AM354_RS03405 PF05198 Translation initiation factor IF-3, N-terminal domain AM354_RS03405 PF00707 Translation initiation factor IF-3, C-terminal domain AM354_RS03410 PF03129 Anticodon binding domain AM354_RS03410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM354_RS03410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM354_RS03410 PF02824 TGS domain AM354_RS03425 PF01914 MarC family integral membrane protein AM354_RS03440 PF00034 Cytochrome c AM354_RS03440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM354_RS03445 PF05199 GMC oxidoreductase AM354_RS03445 PF00732 GMC oxidoreductase AM354_RS03450 PF13618 Gluconate 2-dehydrogenase subunit 3 AM354_RS03455 PF01464 Transglycosylase SLT domain AM354_RS03460 PF11080 Endoribonuclease GhoS AM354_RS03465 PF01297 Zinc-uptake complex component A periplasmic AM354_RS03470 PF00005 ABC transporter AM354_RS03475 PF00950 ABC 3 transport family AM354_RS03480 PF00950 ABC 3 transport family AM354_RS03485 PF03881 Fructosamine kinase AM354_RS03490 PF14002 YniB-like protein AM354_RS03500 PF13419 Haloacid dehalogenase-like hydrolase AM354_RS03505 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM354_RS03510 PF00375 Sodium:dicarboxylate symporter family AM354_RS03520 PF00266 Aminotransferase class-V AM354_RS03525 PF07702 UTRA domain AM354_RS03525 PF00392 Bacterial regulatory proteins, gntR family AM354_RS03530 PF01547 Bacterial extracellular solute-binding protein AM354_RS03535 PF08402 TOBE domain AM354_RS03535 PF00005 ABC transporter AM354_RS03540 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS03545 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS03550 PF01614 Bacterial transcriptional regulator AM354_RS03550 PF09339 IclR helix-turn-helix domain AM354_RS03555 PF07690 Major Facilitator Superfamily AM354_RS03560 PF01435 Peptidase family M48 AM354_RS03565 PF17804 Tail specific protease N-terminal domain AM354_RS03565 PF03572 Peptidase family S41 AM354_RS03565 PF00595 PDZ domain AM354_RS03565 PF11818 C-terminal domain of tail specific protease (DUF3340) AM354_RS03570 PF17516 ProQ C-terminal domain AM354_RS03570 PF04352 ProQ/FINO family AM354_RS03575 PF13185 GAF domain AM354_RS03580 PF04403 Paraquat-inducible protein A AM354_RS03585 PF02470 MlaD protein AM354_RS03590 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AM354_RS03590 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AM354_RS03590 PF01189 16S rRNA methyltransferase RsmB/F AM354_RS03625 PF07351 Protein of unknown function (DUF1480) AM354_RS03650 PF03390 2-hydroxycarboxylate transporter family AM354_RS03655 PF01293 Phosphoenolpyruvate carboxykinase AM354_RS03660 PF00083 Sugar (and other) transporter AM354_RS03665 PF01306 LacY proton/sugar symporter AM354_RS03670 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM354_RS03670 PF08244 Glycosyl hydrolases family 32 C terminal AM354_RS03675 PF00356 Bacterial regulatory proteins, lacI family AM354_RS03675 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM354_RS03680 PF05962 HutD AM354_RS03685 PF01979 Amidohydrolase family AM354_RS03690 PF07702 UTRA domain AM354_RS03690 PF00392 Bacterial regulatory proteins, gntR family AM354_RS03695 PF01979 Amidohydrolase family AM354_RS03710 PF01817 Chorismate mutase type II AM354_RS03725 PF03502 Nucleoside-specific channel-forming protein, Tsx AM354_RS03735 PF00892 EamA-like transporter family AM354_RS03740 PF00324 Amino acid permease AM354_RS03750 PF00120 Glutamine synthetase, catalytic domain AM354_RS03755 PF07722 Peptidase C26 AM354_RS03760 PF01381 Helix-turn-helix AM354_RS03760 PF07883 Cupin domain AM354_RS03765 PF00171 Aldehyde dehydrogenase family AM354_RS03770 PF01266 FAD dependent oxidoreductase AM354_RS03780 PF00582 Universal stress protein family AM354_RS03785 PF00857 Isochorismatase family AM354_RS03795 PF00313 'Cold-shock' DNA-binding domain AM354_RS03805 PF13599 Pentapeptide repeats (9 copies) AM354_RS03840 PF01594 AI-2E family transporter AM354_RS03855 PF06519 TolA C-terminal AM354_RS03860 PF06004 Bacterial protein of unknown function (DUF903) AM354_RS03865 PF06004 Bacterial protein of unknown function (DUF903) AM354_RS03870 PF00582 Universal stress protein family AM354_RS03920 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM354_RS03925 PF08400 Prophage tail fibre N-terminal AM354_RS03925 PF03335 Phage tail fibre repeat AM354_RS03925 PF07484 Phage Tail Collar Domain AM354_RS03970 PF03864 Phage major capsid protein E AM354_RS03980 PF01343 Peptidase family S49 AM354_RS03990 PF02831 gpW AM354_RS03995 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM354_RS04000 PF07471 Phage DNA packaging protein Nu1 AM354_RS04045 PF06147 Protein of unknown function (DUF968) AM354_RS04055 PF05866 Endodeoxyribonuclease RusA AM354_RS04090 PF01381 Helix-turn-helix AM354_RS04090 PF00717 Peptidase S24-like AM354_RS04125 PF00145 C-5 cytosine-specific DNA methylase AM354_RS04135 PF07825 Excisionase-like protein AM354_RS04140 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AM354_RS04140 PF00589 Phage integrase family AM354_RS04150 PF00180 Isocitrate/isopropylmalate dehydrogenase AM354_RS04155 PF00849 RNA pseudouridylate synthase AM354_RS04165 PF00293 NUDIX domain AM354_RS04175 PF02705 K+ potassium transporter AM354_RS04180 PF04356 Protein of unknown function (DUF489) AM354_RS04185 PF08328 Adenylosuccinate lyase C-terminal AM354_RS04185 PF00206 Lyase AM354_RS04190 PF13302 Acetyltransferase (GNAT) domain AM354_RS04200 PF00392 Bacterial regulatory proteins, gntR family AM354_RS04200 PF00155 Aminotransferase class I and II AM354_RS04205 PF07702 UTRA domain AM354_RS04205 PF00392 Bacterial regulatory proteins, gntR family AM354_RS04210 PF03747 ADP-ribosylglycohydrolase AM354_RS04215 PF00072 Response regulator receiver domain AM354_RS04215 PF00486 Transcriptional regulatory protein, C terminal AM354_RS04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS04220 PF08918 PhoQ Sensor AM354_RS04225 PF08007 Cupin superfamily protein AM354_RS04230 PF02615 Malate/L-lactate dehydrogenase AM354_RS04235 PF01546 Peptidase family M20/M25/M40 AM354_RS04235 PF07687 Peptidase dimerisation domain AM354_RS04240 PF08402 TOBE domain AM354_RS04240 PF00005 ABC transporter AM354_RS04245 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS04250 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS04255 PF00367 phosphotransferase system, EIIB AM354_RS04255 PF02378 Phosphotransferase system, EIIC AM354_RS04260 PF02056 Family 4 glycosyl hydrolase AM354_RS04260 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM354_RS04270 PF13416 Bacterial extracellular solute-binding protein AM354_RS04275 PF02146 Sir2 family AM354_RS04280 PF00480 ROK family AM354_RS04285 PF12704 MacB-like periplasmic core domain AM354_RS04285 PF02687 FtsX-like permease family AM354_RS04290 PF00005 ABC transporter AM354_RS04295 PF12704 MacB-like periplasmic core domain AM354_RS04295 PF02687 FtsX-like permease family AM354_RS04300 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS04305 PF03461 TRCF domain AM354_RS04305 PF02559 CarD-like/TRCF domain AM354_RS04305 PF17757 UvrB interaction domain AM354_RS04305 PF00271 Helicase conserved C-terminal domain AM354_RS04305 PF00270 DEAD/DEAH box helicase AM354_RS04310 PF03928 Haem-degrading AM354_RS04315 PF01740 STAS domain AM354_RS04315 PF00916 Sulfate permease family AM354_RS04320 PF00793 DAHP synthetase I family AM354_RS04325 PF13369 Transglutaminase-like superfamily AM354_RS04330 PF04247 Invasion gene expression up-regulator, SirB AM354_RS04335 PF17827 PrmC N-terminal domain AM354_RS04335 PF13847 Methyltransferase domain AM354_RS04340 PF03462 PCRF domain AM354_RS04340 PF00472 RF-1 domain AM354_RS04345 PF01488 Shikimate / quinate 5-dehydrogenase AM354_RS04345 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM354_RS04345 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM354_RS04350 PF03550 Outer membrane lipoprotein LolB AM354_RS04355 PF08544 GHMP kinases C terminal AM354_RS04355 PF00288 GHMP kinases N terminal domain AM354_RS04360 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM354_RS04360 PF14572 Phosphoribosyl synthetase-associated domain AM354_RS04365 PF10762 Protein of unknown function (DUF2583) AM354_RS04370 PF01195 Peptidyl-tRNA hydrolase AM354_RS04375 PF01740 STAS domain AM354_RS04375 PF00916 Sulfate permease family AM354_RS04380 PF06071 Protein of unknown function (DUF933) AM354_RS04380 PF01926 50S ribosome-binding GTPase AM354_RS04390 PF04073 Aminoacyl-tRNA editing domain AM354_RS04390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM354_RS04390 PF03129 Anticodon binding domain AM354_RS04395 PF14765 Polyketide synthase dehydratase AM354_RS04395 PF00550 Phosphopantetheine attachment site AM354_RS04395 PF02801 Beta-ketoacyl synthase, C-terminal domain AM354_RS04395 PF16197 Ketoacyl-synthetase C-terminal extension AM354_RS04395 PF00668 Condensation domain AM354_RS04395 PF13193 AMP-binding enzyme C-terminal domain AM354_RS04395 PF00501 AMP-binding enzyme AM354_RS04395 PF00109 Beta-ketoacyl synthase, N-terminal domain AM354_RS04395 PF08659 KR domain AM354_RS04400 PF01546 Peptidase family M20/M25/M40 AM354_RS04400 PF07687 Peptidase dimerisation domain AM354_RS04410 PF00106 short chain dehydrogenase AM354_RS04420 PF00550 Phosphopantetheine attachment site AM354_RS04420 PF00668 Condensation domain AM354_RS04420 PF13193 AMP-binding enzyme C-terminal domain AM354_RS04420 PF00501 AMP-binding enzyme AM354_RS04425 PF02423 Ornithine cyclodeaminase/mu-crystallin family AM354_RS04435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM354_RS04435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM354_RS04435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM354_RS04445 PF00574 Clp protease AM354_RS04455 PF01022 Bacterial regulatory protein, arsR family AM354_RS04460 PF13520 Amino acid permease AM354_RS04465 PF04074 YhcH/YjgK/YiaL AM354_RS04470 PF02929 Beta galactosidase small chain AM354_RS04470 PF16353 Domain of unknown function(DUF4981) AM354_RS04470 PF00703 Glycosyl hydrolases family 2 AM354_RS04470 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM354_RS04470 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM354_RS04475 PF00356 Bacterial regulatory proteins, lacI family AM354_RS04485 PF01204 Trehalase AM354_RS04490 PF00582 Universal stress protein family AM354_RS04500 PF03180 NLPA lipoprotein AM354_RS04505 PF16868 NMT1-like family AM354_RS04515 PF07729 FCD domain AM354_RS04515 PF00392 Bacterial regulatory proteins, gntR family AM354_RS04520 PF01266 FAD dependent oxidoreductase AM354_RS04530 PF13407 Periplasmic binding protein domain AM354_RS04535 PF02653 Branched-chain amino acid transport system / permease component AM354_RS04540 PF00005 ABC transporter AM354_RS04545 PF13407 Periplasmic binding protein domain AM354_RS04555 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM354_RS04555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS04555 PF00989 PAS fold AM354_RS04555 PF17203 Single cache domain 3 AM354_RS04560 PF00072 Response regulator receiver domain AM354_RS04580 PF07055 Enoyl reductase FAD binding domain AM354_RS04580 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AM354_RS04580 PF12241 Trans-2-enoyl-CoA reductase catalytic region AM354_RS04600 PF10709 Protein of unknown function (DUF2511) AM354_RS04605 PF05425 Copper resistance protein D AM354_RS04610 PF04234 CopC domain AM354_RS04615 PF00210 Ferritin-like domain AM354_RS04620 PF06440 DNA polymerase III, theta subunit AM354_RS04625 PF00561 alpha/beta hydrolase fold AM354_RS04630 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM354_RS04635 PF00929 Exonuclease AM354_RS04640 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM354_RS04640 PF00326 Prolyl oligopeptidase family AM354_RS04645 PF04391 Protein of unknown function (DUF533) AM354_RS04650 PF02613 Nitrate reductase delta subunit AM354_RS04655 PF02811 PHP domain AM354_RS04660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM354_RS04665 PF00854 POT family AM354_RS04695 PF06445 GyrI-like small molecule binding domain AM354_RS04695 PF12833 Helix-turn-helix domain AM354_RS04700 PF13533 Biotin-lipoyl like AM354_RS04705 PF00873 AcrB/AcrD/AcrF family AM354_RS04715 PF05433 Glycine zipper 2TM domain AM354_RS04720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS04725 PF05728 Uncharacterised protein family (UPF0227) AM354_RS04730 PF00933 Glycosyl hydrolase family 3 N terminal domain AM354_RS04735 PF01636 Phosphotransferase enzyme family AM354_RS04740 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM354_RS04740 PF13036 Peptidoglycan-synthase activator LpoB AM354_RS04745 PF07233 Protein of unknown function (DUF1425) AM354_RS04750 PF01230 HIT domain AM354_RS04755 PF01464 Transglycosylase SLT domain AM354_RS04755 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS04760 PF01638 HxlR-like helix-turn-helix AM354_RS04770 PF01566 Natural resistance-associated macrophage protein AM354_RS04775 PF01325 Iron dependent repressor, N-terminal DNA binding domain AM354_RS04775 PF02742 Iron dependent repressor, metal binding and dimerisation domain AM354_RS04785 PF02378 Phosphotransferase system, EIIC AM354_RS04785 PF00367 phosphotransferase system, EIIB AM354_RS04790 PF01026 TatD related DNase AM354_RS04795 PF09115 DNA polymerase III, delta subunit, C terminal AM354_RS04800 PF02223 Thymidylate kinase AM354_RS04805 PF02618 YceG-like family AM354_RS04810 PF01063 Amino-transferase class IV AM354_RS04815 PF00109 Beta-ketoacyl synthase, N-terminal domain AM354_RS04815 PF02801 Beta-ketoacyl synthase, C-terminal domain AM354_RS04820 PF00550 Phosphopantetheine attachment site AM354_RS04830 PF00698 Acyl transferase domain AM354_RS04835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM354_RS04835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM354_RS04840 PF02504 Fatty acid synthesis protein AM354_RS04845 PF01783 Ribosomal L32p protein family AM354_RS04850 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM354_RS04855 PF02545 Maf-like protein AM354_RS04860 PF00849 RNA pseudouridylate synthase AM354_RS04860 PF01479 S4 domain AM354_RS04870 PF00575 S1 RNA binding domain AM354_RS04870 PF10150 Ribonuclease E/G family AM354_RS04870 PF12111 Polyribonucleotide phosphorylase C terminal AM354_RS04875 PF03992 Antibiotic biosynthesis monooxygenase AM354_RS04880 PF01979 Amidohydrolase family AM354_RS04885 PF06183 DinI-like family AM354_RS04895 PF13991 BssS protein family AM354_RS04900 PF01266 FAD dependent oxidoreductase AM354_RS04920 PF01594 AI-2E family transporter AM354_RS04925 PF01292 Prokaryotic cytochrome b561 AM354_RS04930 PF04264 YceI-like domain AM354_RS04935 PF00581 Rhodanese-like domain AM354_RS04935 PF17773 UPF0176 acylphosphatase like domain AM354_RS04935 PF12368 Rhodanase C-terminal AM354_RS04945 PF03279 Bacterial lipid A biosynthesis acyltransferase AM354_RS04955 PF00083 Sugar (and other) transporter AM354_RS04955 PF07690 Major Facilitator Superfamily AM354_RS04960 PF00854 POT family AM354_RS04965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM354_RS04975 PF04143 Sulphur transport AM354_RS04985 PF02311 AraC-like ligand binding domain AM354_RS04985 PF12833 Helix-turn-helix domain AM354_RS04990 PF00682 HMGL-like AM354_RS04990 PF08502 LeuA allosteric (dimerisation) domain AM354_RS04995 PF13984 MsyB protein AM354_RS05005 PF07119 Protein of unknown function (DUF1375) AM354_RS05010 PF00535 Glycosyl transferase family 2 AM354_RS05015 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM354_RS05020 PF01757 Acyltransferase family AM354_RS05030 PF03471 Transporter associated domain AM354_RS05030 PF02080 TrkA-C domain AM354_RS05030 PF00999 Sodium/hydrogen exchanger family AM354_RS05035 PF10777 Inner membrane protein YlaC AM354_RS05055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS05060 PF12704 MacB-like periplasmic core domain AM354_RS05060 PF02687 FtsX-like permease family AM354_RS05060 PF00005 ABC transporter AM354_RS05065 PF02321 Outer membrane efflux protein AM354_RS05070 PF00083 Sugar (and other) transporter AM354_RS05070 PF08946 Osmosensory transporter coiled coil AM354_RS05100 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM354_RS05120 PF01066 CDP-alcohol phosphatidyltransferase AM354_RS05125 PF02151 UvrB/uvrC motif AM354_RS05125 PF01541 GIY-YIG catalytic domain AM354_RS05125 PF08459 UvrC Helix-hairpin-helix N-terminal AM354_RS05130 PF00196 Bacterial regulatory proteins, luxR family AM354_RS05130 PF00072 Response regulator receiver domain AM354_RS05135 PF10769 Protein of unknown function (DUF2594) AM354_RS05140 PF06942 GlpM protein AM354_RS05155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS05155 PF04324 BFD-like [2Fe-2S] binding domain AM354_RS05165 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM354_RS05165 PF01266 FAD dependent oxidoreductase AM354_RS05170 PF05544 Proline racemase AM354_RS05180 PF00701 Dihydrodipicolinate synthetase family AM354_RS05185 PF00171 Aldehyde dehydrogenase family AM354_RS05190 PF13520 Amino acid permease AM354_RS05195 PF02615 Malate/L-lactate dehydrogenase AM354_RS05205 PF00582 Universal stress protein family AM354_RS05210 PF03472 Autoinducer binding domain AM354_RS05210 PF00196 Bacterial regulatory proteins, luxR family AM354_RS05215 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM354_RS05215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM354_RS05215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM354_RS05220 PF02803 Thiolase, C-terminal domain AM354_RS05220 PF00108 Thiolase, N-terminal domain AM354_RS05225 PF00155 Aminotransferase class I and II AM354_RS05230 PF07690 Major Facilitator Superfamily AM354_RS05235 PF00378 Enoyl-CoA hydratase/isomerase AM354_RS05255 PF07690 Major Facilitator Superfamily AM354_RS05270 PF00324 Amino acid permease AM354_RS05285 PF03358 NADPH-dependent FMN reductase AM354_RS05295 PF02386 Cation transport protein AM354_RS05300 PF01223 DNA/RNA non-specific endonuclease AM354_RS05305 PF00873 AcrB/AcrD/AcrF family AM354_RS05310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS05320 PF00376 MerR family regulatory protein AM354_RS05320 PF09278 MerR, DNA binding AM354_RS05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS05325 PF03466 LysR substrate binding domain AM354_RS05340 PF00577 Outer membrane usher protein AM354_RS05340 PF13954 PapC N-terminal domain AM354_RS05340 PF13953 PapC C-terminal domain AM354_RS05345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM354_RS05345 PF02753 Pili assembly chaperone PapD, C-terminal domain AM354_RS05355 PF00196 Bacterial regulatory proteins, luxR family AM354_RS05355 PF00072 Response regulator receiver domain AM354_RS05380 PF01027 Inhibitor of apoptosis-promoting Bax1 AM354_RS05385 PF04358 DsrC like protein AM354_RS05390 PF00708 Acylphosphatase AM354_RS05395 PF10672 S-adenosylmethionine-dependent methyltransferase AM354_RS05395 PF17785 PUA-like domain AM354_RS05400 PF08755 Hemimethylated DNA-binding protein YccV like AM354_RS05405 PF13380 CoA binding domain AM354_RS05410 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM354_RS05415 PF02142 MGS-like domain AM354_RS05420 PF00580 UvrD/REP helicase N-terminal domain AM354_RS05420 PF13361 UvrD-like helicase C-terminal domain AM354_RS05420 PF12462 DNA helicase IV / RNA helicase N terminal AM354_RS05425 PF03733 Inner membrane component domain AM354_RS05430 PF12805 FUSC-like inner membrane protein yccS AM354_RS05435 PF04993 TfoX N-terminal domain AM354_RS05435 PF04994 TfoX C-terminal domain AM354_RS05440 PF03846 Cell division inhibitor SulA AM354_RS05445 PF00691 OmpA family AM354_RS05445 PF01389 OmpA-like transmembrane domain AM354_RS05450 PF06303 MatP N-terminal domain AM354_RS05450 PF17414 MatP C-terminal ribbon-helix-helix domain AM354_RS05455 PF13654 AAA domain AM354_RS05455 PF05362 Lon protease (S16) C-terminal proteolytic domain AM354_RS05460 PF07977 FabA-like domain AM354_RS05470 PF00109 Beta-ketoacyl synthase, N-terminal domain AM354_RS05470 PF02801 Beta-ketoacyl synthase, C-terminal domain AM354_RS05475 PF04957 Ribosome modulation factor AM354_RS05480 PF03886 ABC-type transport auxiliary lipoprotein component AM354_RS05485 PF02470 MlaD protein AM354_RS05490 PF04403 Paraquat-inducible protein A AM354_RS05495 PF16326 ABC transporter C-terminal domain AM354_RS05495 PF00005 ABC transporter AM354_RS05495 PF12848 ABC transporter AM354_RS05500 PF01170 Putative RNA methylase family UPF0020 AM354_RS05500 PF02926 THUMP domain AM354_RS05500 PF10672 S-adenosylmethionine-dependent methyltransferase AM354_RS05505 PF03473 MOSC domain AM354_RS05505 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS05505 PF03476 MOSC N-terminal beta barrel domain AM354_RS05510 PF07126 Cell-division protein ZapC AM354_RS05515 PF01180 Dihydroorotate dehydrogenase AM354_RS05520 PF03358 NADPH-dependent FMN reductase AM354_RS05525 PF09084 NMT1/THI5 like AM354_RS05530 PF00296 Luciferase-like monooxygenase AM354_RS05535 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS05540 PF00005 ABC transporter AM354_RS05545 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM354_RS05545 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM354_RS05545 PF01433 Peptidase family M1 domain AM354_RS05550 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS05550 PF07694 5TMR of 5TMR-LYT AM354_RS05555 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM354_RS05555 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM354_RS05560 PF00152 tRNA synthetases class II (D, K and N) AM354_RS05560 PF01336 OB-fold nucleic acid binding domain AM354_RS05565 PF00267 Gram-negative porin AM354_RS05570 PF00155 Aminotransferase class I and II AM354_RS05575 PF00753 Metallo-beta-lactamase superfamily AM354_RS05580 PF05951 Bacterial protein of unknown function (DUF882) AM354_RS05585 PF03734 L,D-transpeptidase catalytic domain AM354_RS05585 PF01471 Putative peptidoglycan binding domain AM354_RS05590 PF04310 MukB N-terminal AM354_RS05590 PF16330 MukB hinge domain AM354_RS05595 PF04288 MukE-like family AM354_RS05600 PF17192 MukF middle domain AM354_RS05600 PF17193 MukF C-terminal domain AM354_RS05600 PF03882 MukF winged-helix domain AM354_RS05605 PF13847 Methyltransferase domain AM354_RS05610 PF02698 DUF218 domain AM354_RS05615 PF01636 Phosphotransferase enzyme family AM354_RS05620 PF02348 Cytidylyltransferase AM354_RS05625 PF03966 Trm112p-like protein AM354_RS05630 PF06224 Winged helix DNA-binding domain AM354_RS05635 PF00313 'Cold-shock' DNA-binding domain AM354_RS05640 PF00313 'Cold-shock' DNA-binding domain AM354_RS05645 PF07063 Domain of unknown function (DUF1338) AM354_RS05650 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM354_RS05655 PF00664 ABC transporter transmembrane region AM354_RS05655 PF00005 ABC transporter AM354_RS05660 PF00753 Metallo-beta-lactamase superfamily AM354_RS05660 PF03772 Competence protein AM354_RS05665 PF00216 Bacterial DNA-binding protein AM354_RS05670 PF00575 S1 RNA binding domain AM354_RS05675 PF02224 Cytidylate kinase AM354_RS05680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM354_RS05685 PF00266 Aminotransferase class-V AM354_RS05690 PF00710 Asparaginase, N-terminal AM354_RS05690 PF17763 Glutaminase/Asparaginase C-terminal domain AM354_RS05695 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM354_RS05695 PF18381 YcaO cyclodehydratase C-terminal domain AM354_RS05700 PF01226 Formate/nitrite transporter AM354_RS05705 PF01228 Glycine radical AM354_RS05705 PF02901 Pyruvate formate lyase-like AM354_RS05710 PF04055 Radical SAM superfamily AM354_RS05715 PF07690 Major Facilitator Superfamily AM354_RS05725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM354_RS05725 PF02403 Seryl-tRNA synthetase N-terminal domain AM354_RS05730 PF00004 ATPase family associated with various cellular activities (AAA) AM354_RS05730 PF16193 AAA C-terminal domain AM354_RS05730 PF12002 MgsA AAA+ ATPase C terminal AM354_RS05735 PF03548 Outer membrane lipoprotein carrier protein LolA AM354_RS05740 PF09397 Ftsk gamma domain AM354_RS05740 PF17854 FtsK alpha domain AM354_RS05740 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM354_RS05740 PF01580 FtsK/SpoIIIE family AM354_RS05745 PF01037 Lrp/AsnC ligand binding domain AM354_RS05750 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS05755 PF00664 ABC transporter transmembrane region AM354_RS05755 PF00005 ABC transporter AM354_RS05760 PF00005 ABC transporter AM354_RS05760 PF00664 ABC transporter transmembrane region AM354_RS05765 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM354_RS05770 PF01176 Translation initiation factor 1A / IF-1 AM354_RS05775 PF02861 Clp amino terminal domain, pathogenicity island component AM354_RS05775 PF00004 ATPase family associated with various cellular activities (AAA) AM354_RS05775 PF07724 AAA domain (Cdc48 subfamily) AM354_RS05775 PF17871 AAA lid domain AM354_RS05775 PF10431 C-terminal, D2-small domain, of ClpB protein AM354_RS05780 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM354_RS05785 PF00313 'Cold-shock' DNA-binding domain AM354_RS05790 PF02687 FtsX-like permease family AM354_RS05790 PF00005 ABC transporter AM354_RS05790 PF12704 MacB-like periplasmic core domain AM354_RS05795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS05800 PF04393 Protein of unknown function (DUF535) AM354_RS05805 PF11398 Protein of unknown function (DUF2813) AM354_RS05810 PF03956 Lysine exporter LysO AM354_RS05815 PF03063 Prismane/CO dehydrogenase family AM354_RS05820 PF00175 Oxidoreductase NAD-binding domain AM354_RS05820 PF00970 Oxidoreductase FAD-binding domain AM354_RS05820 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS05825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS05825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS05825 PF00205 Thiamine pyrophosphate enzyme, central domain AM354_RS05830 PF01212 Beta-eliminating lyase AM354_RS05835 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AM354_RS05840 PF02378 Phosphotransferase system, EIIC AM354_RS05840 PF00367 phosphotransferase system, EIIB AM354_RS05840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM354_RS05845 PF01380 SIS domain AM354_RS05845 PF01418 Helix-turn-helix domain, rpiR family AM354_RS05855 PF11066 Protein of unknown function (DUF2867) AM354_RS05855 PF13460 NAD(P)H-binding AM354_RS05860 PF01370 NAD dependent epimerase/dehydratase family AM354_RS05865 PF01510 N-acetylmuramoyl-L-alanine amidase AM354_RS05870 PF01906 Putative heavy-metal-binding AM354_RS05875 PF12883 Protein of unknown function (DUF3828) AM354_RS05880 PF00005 ABC transporter AM354_RS05885 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS05895 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS05900 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS05905 PF05958 tRNA (Uracil-5-)-methyltransferase AM354_RS05910 PF10767 Protein of unknown function (DUF2593) AM354_RS05915 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS05920 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS05925 PF08402 TOBE domain AM354_RS05925 PF00005 ABC transporter AM354_RS05930 PF13416 Bacterial extracellular solute-binding protein AM354_RS05935 PF10722 Putative bacterial sensory transduction regulator AM354_RS05940 PF08443 RimK-like ATP-grasp domain AM354_RS05940 PF18030 RimK PreATP-grasp domain AM354_RS05945 PF07214 Protein of unknown function (DUF1418) AM354_RS05950 PF00462 Glutaredoxin AM354_RS05955 PF11045 Putative inner membrane protein of Enterobacteriaceae AM354_RS05960 PF02080 TrkA-C domain AM354_RS05960 PF06826 Predicted Permease Membrane Region AM354_RS05980 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM354_RS05985 PF07005 Sugar-binding N-terminal domain AM354_RS05985 PF17042 Nucleotide-binding C-terminal domain AM354_RS05990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS05990 PF03466 LysR substrate binding domain AM354_RS05995 PF03974 Ecotin AM354_RS06010 PF01569 PAP2 superfamily AM354_RS06020 PF01791 DeoC/LacD family aldolase AM354_RS06025 PF00455 DeoR C terminal sensor domain AM354_RS06025 PF08220 DeoR-like helix-turn-helix domain AM354_RS06035 PF03315 Serine dehydratase beta chain AM354_RS06035 PF03313 Serine dehydratase alpha chain AM354_RS06040 PF00072 Response regulator receiver domain AM354_RS06040 PF00196 Bacterial regulatory proteins, luxR family AM354_RS06045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM354_RS06045 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM354_RS06065 PF02753 Pili assembly chaperone PapD, C-terminal domain AM354_RS06065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM354_RS06070 PF13954 PapC N-terminal domain AM354_RS06070 PF00577 Outer membrane usher protein AM354_RS06070 PF13953 PapC C-terminal domain AM354_RS06075 PF00419 Fimbrial protein AM354_RS06080 PF00419 Fimbrial protein AM354_RS06090 PF00419 Fimbrial protein AM354_RS06095 PF00419 Fimbrial protein AM354_RS06100 PF07943 Penicillin-binding protein 5, C-terminal domain AM354_RS06100 PF00768 D-alanyl-D-alanine carboxypeptidase AM354_RS06105 PF00291 Pyridoxal-phosphate dependent enzyme AM354_RS06105 PF00571 CBS domain AM354_RS06110 PF01053 Cys/Met metabolism PLP-dependent enzyme AM354_RS06125 PF13417 Glutathione S-transferase, N-terminal domain AM354_RS06125 PF00043 Glutathione S-transferase, C-terminal domain AM354_RS06130 PF07995 Glucose / Sorbosone dehydrogenase AM354_RS06140 PF01544 CorA-like Mg2+ transporter protein AM354_RS06145 PF00583 Acetyltransferase (GNAT) family AM354_RS06145 PF00795 Carbon-nitrogen hydrolase AM354_RS06150 PF00474 Sodium:solute symporter family AM354_RS06155 PF00491 Arginase family AM354_RS06160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS06160 PF03466 LysR substrate binding domain AM354_RS06165 PF01370 NAD dependent epimerase/dehydratase family AM354_RS06175 PF08029 HisG, C-terminal domain AM354_RS06175 PF01634 ATP phosphoribosyltransferase AM354_RS06180 PF00815 Histidinol dehydrogenase AM354_RS06185 PF00155 Aminotransferase class I and II AM354_RS06190 PF00475 Imidazoleglycerol-phosphate dehydratase AM354_RS06195 PF00117 Glutamine amidotransferase class-I AM354_RS06200 PF00977 Histidine biosynthesis protein AM354_RS06205 PF00977 Histidine biosynthesis protein AM354_RS06210 PF01502 Phosphoribosyl-AMP cyclohydrolase AM354_RS06210 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM354_RS06215 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AM354_RS06215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM354_RS06225 PF00862 Sucrose synthase AM354_RS06225 PF00534 Glycosyl transferases group 1 AM354_RS06235 PF08241 Methyltransferase domain AM354_RS06240 PF00005 ABC transporter AM354_RS06250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM354_RS06250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM354_RS06250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM354_RS06250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM354_RS06255 PF00483 Nucleotidyl transferase AM354_RS06255 PF01050 Mannose-6-phosphate isomerase AM354_RS06260 PF16363 GDP-mannose 4,6 dehydratase AM354_RS06265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM354_RS06265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM354_RS06265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM354_RS06265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM354_RS06270 PF01050 Mannose-6-phosphate isomerase AM354_RS06270 PF00483 Nucleotidyl transferase AM354_RS06275 PF02321 Outer membrane efflux protein AM354_RS06280 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS06285 PF00005 ABC transporter AM354_RS06285 PF00664 ABC transporter transmembrane region AM354_RS06305 PF13439 Glycosyltransferase Family 4 AM354_RS06310 PF02397 Bacterial sugar transferase AM354_RS06315 PF13439 Glycosyltransferase Family 4 AM354_RS06315 PF00534 Glycosyl transferases group 1 AM354_RS06320 PF13439 Glycosyltransferase Family 4 AM354_RS06320 PF00534 Glycosyl transferases group 1 AM354_RS06330 PF13439 Glycosyltransferase Family 4 AM354_RS06330 PF00534 Glycosyl transferases group 1 AM354_RS06335 PF13614 AAA domain AM354_RS06335 PF02706 Chain length determinant protein AM354_RS06335 PF13807 G-rich domain on putative tyrosine kinase AM354_RS06340 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM354_RS06345 PF10531 SLBB domain AM354_RS06345 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM354_RS06345 PF02563 Polysaccharide biosynthesis/export protein AM354_RS06350 PF00483 Nucleotidyl transferase AM354_RS06355 PF00483 Nucleotidyl transferase AM354_RS06360 PF03471 Transporter associated domain AM354_RS06360 PF00571 CBS domain AM354_RS06360 PF03741 Integral membrane protein TerC family AM354_RS06365 PF03606 C4-dicarboxylate anaerobic carrier AM354_RS06370 PF05170 AsmA family AM354_RS06375 PF00692 dUTPase AM354_RS06380 PF00485 Phosphoribulokinase / Uridine kinase family AM354_RS06385 PF01569 PAP2 superfamily AM354_RS06390 PF10609 NUBPL iron-transfer P-loop NTPase AM354_RS06395 PF01588 Putative tRNA binding domain AM354_RS06395 PF09334 tRNA synthetases class I (M) AM354_RS06405 PF07690 Major Facilitator Superfamily AM354_RS06410 PF03788 LrgA family AM354_RS06415 PF04172 LrgB-like family AM354_RS06420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM354_RS06420 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AM354_RS06425 PF03949 Malic enzyme, NAD binding domain AM354_RS06425 PF00390 Malic enzyme, N-terminal domain AM354_RS06430 PF02698 DUF218 domain AM354_RS06435 PF02653 Branched-chain amino acid transport system / permease component AM354_RS06440 PF00005 ABC transporter AM354_RS06445 PF13407 Periplasmic binding protein domain AM354_RS06450 PF00356 Bacterial regulatory proteins, lacI family AM354_RS06455 PF04235 Protein of unknown function (DUF418) AM354_RS06460 PF01227 GTP cyclohydrolase I AM354_RS06465 PF06779 Uncharacterised MFS-type transporter YbfB AM354_RS06470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS06470 PF03466 LysR substrate binding domain AM354_RS06475 PF00107 Zinc-binding dehydrogenase AM354_RS06475 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS06480 PF00756 Putative esterase AM354_RS06485 PF12911 N-terminal TM domain of oligopeptide transport permease C AM354_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS06490 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS06495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS06500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM354_RS06500 PF00005 ABC transporter AM354_RS06505 PF01112 Asparaginase AM354_RS06515 PF03453 MoeA N-terminal region (domain I and II) AM354_RS06515 PF03454 MoeA C-terminal region (domain IV) AM354_RS06515 PF00994 Probable molybdopterin binding domain AM354_RS06520 PF00899 ThiF family AM354_RS06525 PF00005 ABC transporter AM354_RS06525 PF12848 ABC transporter AM354_RS06530 PF07690 Major Facilitator Superfamily AM354_RS06535 PF03466 LysR substrate binding domain AM354_RS06535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS06540 PF00484 Carbonic anhydrase AM354_RS06545 PF02560 Cyanate lyase C-terminal domain AM354_RS06560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS06560 PF03466 LysR substrate binding domain AM354_RS06565 PF00857 Isochorismatase family AM354_RS06580 PF02798 Glutathione S-transferase, N-terminal domain AM354_RS06580 PF00043 Glutathione S-transferase, C-terminal domain AM354_RS06585 PF00245 Alkaline phosphatase AM354_RS06590 PF06039 Malate:quinone oxidoreductase (Mqo) AM354_RS06595 PF12833 Helix-turn-helix domain AM354_RS06595 PF06445 GyrI-like small molecule binding domain AM354_RS06605 PF00577 Outer membrane usher protein AM354_RS06605 PF13953 PapC C-terminal domain AM354_RS06605 PF13954 PapC N-terminal domain AM354_RS06610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM354_RS06610 PF02753 Pili assembly chaperone PapD, C-terminal domain AM354_RS06615 PF00419 Fimbrial protein AM354_RS06620 PF00563 EAL domain AM354_RS06630 PF01645 Conserved region in glutamate synthase AM354_RS06635 PF05199 GMC oxidoreductase AM354_RS06635 PF00732 GMC oxidoreductase AM354_RS06640 PF00171 Aldehyde dehydrogenase family AM354_RS06645 PF00440 Bacterial regulatory proteins, tetR family AM354_RS06645 PF13977 BetI-type transcriptional repressor, C-terminal AM354_RS06650 PF02028 BCCT, betaine/carnitine/choline family transporter AM354_RS06665 PF00174 Oxidoreductase molybdopterin binding domain AM354_RS06670 PF01292 Prokaryotic cytochrome b561 AM354_RS06675 PF00486 Transcriptional regulatory protein, C terminal AM354_RS06675 PF00072 Response regulator receiver domain AM354_RS06680 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS06680 PF18698 Histidine kinase sensor domain AM354_RS06680 PF00672 HAMP domain AM354_RS06680 PF00989 PAS fold AM354_RS06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS06695 PF15976 CS1-pili formation C-terminal AM354_RS06695 PF16967 E-set like domain AM354_RS06700 PF18649 EcpB C-terminal domain AM354_RS06705 PF16449 Fimbrillin MatB AM354_RS06720 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS06720 PF00672 HAMP domain AM354_RS06725 PF00072 Response regulator receiver domain AM354_RS06725 PF00486 Transcriptional regulatory protein, C terminal AM354_RS06735 PF01292 Prokaryotic cytochrome b561 AM354_RS06740 PF00174 Oxidoreductase molybdopterin binding domain AM354_RS06750 PF08220 DeoR-like helix-turn-helix domain AM354_RS06750 PF00455 DeoR C terminal sensor domain AM354_RS06755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM354_RS06755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM354_RS06760 PF17042 Nucleotide-binding C-terminal domain AM354_RS06760 PF07005 Sugar-binding N-terminal domain AM354_RS06765 PF00596 Class II Aldolase and Adducin N-terminal domain AM354_RS06770 PF01261 Xylose isomerase-like TIM barrel AM354_RS06775 PF02447 GntP family permease AM354_RS06785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS06785 PF03466 LysR substrate binding domain AM354_RS06790 PF00795 Carbon-nitrogen hydrolase AM354_RS06795 PF13505 Outer membrane protein beta-barrel domain AM354_RS06800 PF00892 EamA-like transporter family AM354_RS06805 PF04074 YhcH/YjgK/YiaL AM354_RS06810 PF02224 Cytidylate kinase AM354_RS06815 PF00210 Ferritin-like domain AM354_RS06820 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM354_RS06825 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS06830 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS06835 PF00005 ABC transporter AM354_RS06840 PF00924 Mechanosensitive ion channel AM354_RS06845 PF08447 PAS fold AM354_RS06845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM354_RS06845 PF13426 PAS domain AM354_RS06850 PF05971 RNA methyltransferase AM354_RS06855 PF01613 Flavin reductase like domain AM354_RS06860 PF07338 Protein of unknown function (DUF1471) AM354_RS06865 PF00484 Carbonic anhydrase AM354_RS06875 PF02885 Glycosyl transferase family, helical bundle domain AM354_RS06885 PF07690 Major Facilitator Superfamily AM354_RS06895 PF01810 LysE type translocator AM354_RS06900 PF03972 MmgE/PrpD family AM354_RS06905 PF00285 Citrate synthase, C-terminal domain AM354_RS06915 PF00158 Sigma-54 interaction domain AM354_RS06915 PF06506 Propionate catabolism activator AM354_RS06915 PF02954 Bacterial regulatory protein, Fis family AM354_RS06920 PF00892 EamA-like transporter family AM354_RS06925 PF01037 Lrp/AsnC ligand binding domain AM354_RS06930 PF06733 DEAD_2 AM354_RS06930 PF13307 Helicase C-terminal domain AM354_RS06935 PF14552 Tautomerase enzyme AM354_RS06940 PF02627 Carboxymuconolactone decarboxylase family AM354_RS06945 PF13417 Glutathione S-transferase, N-terminal domain AM354_RS06950 PF00267 Gram-negative porin AM354_RS06955 PF00583 Acetyltransferase (GNAT) family AM354_RS06955 PF13607 Succinyl-CoA ligase like flavodoxin domain AM354_RS06955 PF13380 CoA binding domain AM354_RS06960 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM354_RS06980 PF07690 Major Facilitator Superfamily AM354_RS06995 PF00892 EamA-like transporter family AM354_RS07015 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS07020 PF00005 ABC transporter AM354_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS07030 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM354_RS07045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS07045 PF03466 LysR substrate binding domain AM354_RS07050 PF00857 Isochorismatase family AM354_RS07060 PF07969 Amidohydrolase family AM354_RS07065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM354_RS07065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM354_RS07070 PF13417 Glutathione S-transferase, N-terminal domain AM354_RS07070 PF00043 Glutathione S-transferase, C-terminal domain AM354_RS07080 PF00392 Bacterial regulatory proteins, gntR family AM354_RS07080 PF00155 Aminotransferase class I and II AM354_RS07085 PF00293 NUDIX domain AM354_RS07090 PF00581 Rhodanese-like domain AM354_RS07095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS07095 PF03466 LysR substrate binding domain AM354_RS07105 PF01494 FAD binding domain AM354_RS07130 PF00005 ABC transporter AM354_RS07135 PF00005 ABC transporter AM354_RS07135 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM354_RS07140 PF02653 Branched-chain amino acid transport system / permease component AM354_RS07145 PF02653 Branched-chain amino acid transport system / permease component AM354_RS07150 PF13458 Periplasmic binding protein AM354_RS07155 PF07729 FCD domain AM354_RS07155 PF00392 Bacterial regulatory proteins, gntR family AM354_RS07160 PF02785 Biotin carboxylase C-terminal domain AM354_RS07160 PF00364 Biotin-requiring enzyme AM354_RS07160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM354_RS07160 PF00289 Biotin carboxylase, N-terminal domain AM354_RS07165 PF01425 Amidase AM354_RS07175 PF07308 Protein of unknown function (DUF1456) AM354_RS07180 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS07185 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS07195 PF00005 ABC transporter AM354_RS07200 PF00579 tRNA synthetases class I (W and Y) AM354_RS07205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM354_RS07205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM354_RS07225 PF00117 Glutamine amidotransferase class-I AM354_RS07225 PF03352 Methyladenine glycosylase AM354_RS07225 PF13302 Acetyltransferase (GNAT) domain AM354_RS07225 PF13673 Acetyltransferase (GNAT) domain AM354_RS07225 PF00958 GMP synthase C terminal domain AM354_RS07230 PF09383 NIL domain AM354_RS07230 PF00005 ABC transporter AM354_RS07235 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS07240 PF03180 NLPA lipoprotein AM354_RS07245 PF00440 Bacterial regulatory proteins, tetR family AM354_RS07250 PF07338 Protein of unknown function (DUF1471) AM354_RS07255 PF07338 Protein of unknown function (DUF1471) AM354_RS07260 PF01678 Diaminopimelate epimerase AM354_RS07270 PF00583 Acetyltransferase (GNAT) family AM354_RS07275 PF03783 Curli production assembly/transport component CsgG AM354_RS07285 PF05643 Putative bacterial lipoprotein (DUF799) AM354_RS07290 PF02806 Alpha amylase, C-terminal all-beta domain AM354_RS07290 PF00128 Alpha amylase, catalytic domain AM354_RS07305 PF12833 Helix-turn-helix domain AM354_RS07310 PF01810 LysE type translocator AM354_RS07315 PF00892 EamA-like transporter family AM354_RS07320 PF03992 Antibiotic biosynthesis monooxygenase AM354_RS07325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM354_RS07325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM354_RS07330 PF07690 Major Facilitator Superfamily AM354_RS07335 PF03466 LysR substrate binding domain AM354_RS07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS07340 PF01844 HNH endonuclease AM354_RS07345 PF13614 AAA domain AM354_RS07355 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM354_RS07360 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS07360 PF01799 [2Fe-2S] binding domain AM354_RS07365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM354_RS07365 PF00034 Cytochrome c AM354_RS07375 PF02611 CDP-diacylglycerol pyrophosphatase AM354_RS07380 PF00561 alpha/beta hydrolase fold AM354_RS07390 PF00005 ABC transporter AM354_RS07395 PF01032 FecCD transport family AM354_RS07400 PF01497 Periplasmic binding protein AM354_RS07420 PF00933 Glycosyl hydrolase family 3 N terminal domain AM354_RS07420 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM354_RS07420 PF14310 Fibronectin type III-like domain AM354_RS07425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS07425 PF03466 LysR substrate binding domain AM354_RS07430 PF00155 Aminotransferase class I and II AM354_RS07435 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS07440 PF01820 D-ala D-ala ligase N-terminus AM354_RS07440 PF07478 D-ala D-ala ligase C-terminus AM354_RS07450 PF00557 Metallopeptidase family M24 AM354_RS07455 PF09330 D-lactate dehydrogenase, membrane binding AM354_RS07455 PF01565 FAD binding domain AM354_RS07460 PF08447 PAS fold AM354_RS07460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM354_RS07465 PF00175 Oxidoreductase NAD-binding domain AM354_RS07465 PF00258 Flavodoxin AM354_RS07465 PF00667 FAD binding domain AM354_RS07470 PF01032 FecCD transport family AM354_RS07485 PF00005 ABC transporter AM354_RS07495 PF04893 Yip1 domain AM354_RS07505 PF00583 Acetyltransferase (GNAT) family AM354_RS07515 PF03180 NLPA lipoprotein AM354_RS07525 PF05661 Protein of unknown function (DUF808) AM354_RS07545 PF00768 D-alanyl-D-alanine carboxypeptidase AM354_RS07550 PF05221 S-adenosyl-L-homocysteine hydrolase AM354_RS07550 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM354_RS07555 PF01965 DJ-1/PfpI family AM354_RS07555 PF12833 Helix-turn-helix domain AM354_RS07560 PF01965 DJ-1/PfpI family AM354_RS07565 PF09335 SNARE associated Golgi protein AM354_RS07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS07570 PF03466 LysR substrate binding domain AM354_RS07580 PF00324 Amino acid permease AM354_RS07590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS07590 PF03466 LysR substrate binding domain AM354_RS07600 PF00797 N-acetyltransferase AM354_RS07605 PF00196 Bacterial regulatory proteins, luxR family AM354_RS07605 PF00072 Response regulator receiver domain AM354_RS07610 PF07730 Histidine kinase AM354_RS07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS07610 PF05231 MASE1 AM354_RS07615 PF07690 Major Facilitator Superfamily AM354_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS07630 PF00005 ABC transporter AM354_RS07630 PF08402 TOBE domain AM354_RS07640 PF01207 Dihydrouridine synthase (Dus) AM354_RS07645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM354_RS07645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM354_RS07650 PF00271 Helicase conserved C-terminal domain AM354_RS07650 PF00270 DEAD/DEAH box helicase AM354_RS07655 PF09209 Tetracyclin repressor-like, C-terminal domain AM354_RS07655 PF00440 Bacterial regulatory proteins, tetR family AM354_RS07660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS07665 PF00005 ABC transporter AM354_RS07680 PF01027 Inhibitor of apoptosis-promoting Bax1 AM354_RS07685 PF02391 MoaE protein AM354_RS07690 PF02597 ThiS family AM354_RS07695 PF01967 MoaC family AM354_RS07700 PF00994 Probable molybdopterin binding domain AM354_RS07705 PF04055 Radical SAM superfamily AM354_RS07705 PF06463 Molybdenum Cofactor Synthesis C AM354_RS07710 PF01933 Uncharacterised protein family UPF0052 AM354_RS07715 PF09905 DNA-binding protein VF530 AM354_RS07720 PF00271 Helicase conserved C-terminal domain AM354_RS07720 PF04851 Type III restriction enzyme, res subunit AM354_RS07720 PF02151 UvrB/uvrC motif AM354_RS07720 PF12344 Ultra-violet resistance protein B AM354_RS07720 PF17757 UvrB interaction domain AM354_RS07725 PF09383 NIL domain AM354_RS07725 PF00005 ABC transporter AM354_RS07735 PF08241 Methyltransferase domain AM354_RS07740 PF00155 Aminotransferase class I and II AM354_RS07745 PF04055 Radical SAM superfamily AM354_RS07745 PF06968 Biotin and Thiamin Synthesis associated domain AM354_RS07750 PF00202 Aminotransferase class-III AM354_RS07760 PF01161 Phosphatidylethanolamine-binding protein AM354_RS07765 PF10282 Lactonase, 7-bladed beta-propeller AM354_RS07775 PF00005 ABC transporter AM354_RS07775 PF03459 TOBE domain AM354_RS07780 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS07790 PF10766 Multidrug efflux pump-associated protein AcrZ AM354_RS07795 PF00005 ABC transporter AM354_RS07800 PF01032 FecCD transport family AM354_RS07805 PF05175 Methyltransferase small domain AM354_RS07815 PF07715 TonB-dependent Receptor Plug Domain AM354_RS07815 PF00593 TonB dependent receptor AM354_RS07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS07820 PF03459 TOBE domain AM354_RS07825 PF00005 ABC transporter AM354_RS07840 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM354_RS07840 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM354_RS07845 PF08544 GHMP kinases C terminal AM354_RS07845 PF10509 Galactokinase galactose-binding signature AM354_RS07845 PF00288 GHMP kinases N terminal domain AM354_RS07850 PF01263 Aldose 1-epimerase AM354_RS07860 PF00300 Histidine phosphatase superfamily (branch 1) AM354_RS07875 PF00793 DAHP synthetase I family AM354_RS07880 PF00072 Response regulator receiver domain AM354_RS07880 PF00196 Bacterial regulatory proteins, luxR family AM354_RS07885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS07885 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS07885 PF01627 Hpt domain AM354_RS07885 PF00989 PAS fold AM354_RS07885 PF00072 Response regulator receiver domain AM354_RS07885 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS07890 PF01545 Cation efflux family AM354_RS07895 PF04973 Nicotinamide mononucleotide transporter AM354_RS07900 PF02445 Quinolinate synthetase A protein AM354_RS07945 PF13174 Tetratricopeptide repeat AM354_RS07945 PF16331 TolA binding protein trimerisation AM354_RS07950 PF00691 OmpA family AM354_RS07955 PF07676 WD40-like Beta Propeller Repeat AM354_RS07955 PF04052 TolB amino-terminal domain AM354_RS07960 PF06519 TolA C-terminal AM354_RS07960 PF06519 TolA C-terminal AM354_RS07965 PF02472 Biopolymer transport protein ExbD/TolR AM354_RS07970 PF01618 MotA/TolQ/ExbB proton channel family AM354_RS07975 PF03061 Thioesterase superfamily AM354_RS07980 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AM354_RS07985 PF08173 Membrane bound YbgT-like protein AM354_RS07990 PF02322 Cytochrome bd terminal oxidase subunit II AM354_RS07995 PF01654 Cytochrome bd terminal oxidase subunit I AM354_RS08000 PF00149 Calcineurin-like phosphoesterase AM354_RS08000 PF02872 5'-nucleotidase, C-terminal domain AM354_RS08005 PF00549 CoA-ligase AM354_RS08005 PF02629 CoA binding domain AM354_RS08010 PF00549 CoA-ligase AM354_RS08010 PF08442 ATP-grasp domain AM354_RS08015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM354_RS08015 PF00364 Biotin-requiring enzyme AM354_RS08015 PF02817 e3 binding domain AM354_RS08020 PF02779 Transketolase, pyrimidine binding domain AM354_RS08020 PF00676 Dehydrogenase E1 component AM354_RS08020 PF16078 2-oxoglutarate dehydrogenase N-terminus AM354_RS08020 PF16870 2-oxoglutarate dehydrogenase C-terminal AM354_RS08025 PF13085 2Fe-2S iron-sulfur cluster binding domain AM354_RS08030 PF00890 FAD binding domain AM354_RS08030 PF02910 Fumarate reductase flavoprotein C-term AM354_RS08035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM354_RS08040 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM354_RS08045 PF00285 Citrate synthase, C-terminal domain AM354_RS08050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM354_RS08050 PF06827 Zinc finger found in FPG and IleRS AM354_RS08050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM354_RS08055 PF01470 Pyroglutamyl peptidase AM354_RS08070 PF03746 LamB/YcsF family AM354_RS08075 PF02626 Carboxyltransferase domain, subdomain A and B AM354_RS08080 PF02682 Carboxyltransferase domain, subdomain C and D AM354_RS08085 PF01784 NIF3 (NGG1p interacting factor 3) AM354_RS08090 PF02112 cAMP phosphodiesterases class-II AM354_RS08095 PF00875 DNA photolyase AM354_RS08095 PF03441 FAD binding domain of DNA photolyase AM354_RS08100 PF08349 Protein of unknown function (DUF1722) AM354_RS08105 PF10725 Protein of unknown function (DUF2517) AM354_RS08115 PF03814 Potassium-transporting ATPase A subunit AM354_RS08125 PF02669 K+-transporting ATPase, c chain AM354_RS08130 PF13492 GAF domain AM354_RS08130 PF02702 Osmosensitive K+ channel His kinase sensor domain AM354_RS08130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS08130 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS08130 PF13493 Domain of unknown function (DUF4118) AM354_RS08135 PF00486 Transcriptional regulatory protein, C terminal AM354_RS08135 PF00072 Response regulator receiver domain AM354_RS08145 PF03551 Transcriptional regulator PadR-like family AM354_RS08150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM354_RS08150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM354_RS08150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM354_RS08150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM354_RS08155 PF17206 SeqA protein N-terminal domain AM354_RS08155 PF03925 SeqA protein C-terminal domain AM354_RS08160 PF12697 Alpha/beta hydrolase family AM354_RS08165 PF01402 Ribbon-helix-helix protein, copG family AM354_RS08170 PF00258 Flavodoxin AM354_RS08175 PF01475 Ferric uptake regulator family AM354_RS08180 PF02838 Glycosyl hydrolase family 20, domain 2 AM354_RS08180 PF00728 Glycosyl hydrolase family 20, catalytic domain AM354_RS08180 PF03173 Putative carbohydrate binding domain AM354_RS08180 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AM354_RS08185 PF13982 YbfN-like lipoprotein AM354_RS08190 PF03573 outer membrane porin, OprD family AM354_RS08195 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM354_RS08195 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM354_RS08200 PF00367 phosphotransferase system, EIIB AM354_RS08200 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM354_RS08200 PF02378 Phosphotransferase system, EIIC AM354_RS08205 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM354_RS08210 PF01979 Amidohydrolase family AM354_RS08215 PF00480 ROK family AM354_RS08215 PF01047 MarR family AM354_RS08220 PF13344 Haloacid dehalogenase-like hydrolase AM354_RS08225 PF00704 Glycosyl hydrolases family 18 AM354_RS08230 PF00733 Asparagine synthase AM354_RS08230 PF13537 Glutamine amidotransferase domain AM354_RS08265 PF01494 FAD binding domain AM354_RS08270 PF04055 Radical SAM superfamily AM354_RS08270 PF01938 TRAM domain AM354_RS08270 PF00919 Uncharacterized protein family UPF0004 AM354_RS08275 PF03831 PhnA domain AM354_RS08275 PF08274 PhnA Zinc-Ribbon AM354_RS08280 PF02562 PhoH-like protein AM354_RS08285 PF02130 Uncharacterized protein family UPF0054 AM354_RS08290 PF03471 Transporter associated domain AM354_RS08290 PF00571 CBS domain AM354_RS08295 PF00795 Carbon-nitrogen hydrolase AM354_RS08300 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS08305 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS08310 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS08315 PF00005 ABC transporter AM354_RS08320 PF01156 Inosine-uridine preferring nucleoside hydrolase AM354_RS08325 PF02525 Flavodoxin-like fold AM354_RS08330 PF07295 Zinc-ribbon containing domain AM354_RS08335 PF08264 Anticodon-binding domain of tRNA AM354_RS08335 PF00133 tRNA synthetases class I (I, L, M and V) AM354_RS08335 PF13603 Leucyl-tRNA synthetase, Domain 2 AM354_RS08340 PF04390 Lipopolysaccharide-assembly AM354_RS08345 PF06144 DNA polymerase III, delta subunit AM354_RS08345 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AM354_RS08350 PF01467 Cytidylyltransferase-like AM354_RS08360 PF02590 Predicted SPOUT methyltransferase AM354_RS08365 PF00905 Penicillin binding protein transpeptidase domain AM354_RS08365 PF03717 Penicillin-binding Protein dimerisation domain AM354_RS08370 PF01098 Cell cycle protein AM354_RS08375 PF05036 Sporulation related domain AM354_RS08375 PF03330 Lytic transglycolase AM354_RS08380 PF07943 Penicillin-binding protein 5, C-terminal domain AM354_RS08380 PF00768 D-alanyl-D-alanine carboxypeptidase AM354_RS08385 PF04359 Protein of unknown function (DUF493) AM354_RS08390 PF03099 Biotin/lipoate A/B protein ligase family AM354_RS08395 PF04055 Radical SAM superfamily AM354_RS08395 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM354_RS08400 PF02416 mttA/Hcf106 family AM354_RS08405 PF05230 MASE2 domain AM354_RS08405 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS08410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM354_RS08415 PF00440 Bacterial regulatory proteins, tetR family AM354_RS08415 PF17922 Tetracyclin repressor-like, C-terminal domain AM354_RS08420 PF07690 Major Facilitator Superfamily AM354_RS08425 PF00313 'Cold-shock' DNA-binding domain AM354_RS08430 PF01546 Peptidase family M20/M25/M40 AM354_RS08430 PF07687 Peptidase dimerisation domain AM354_RS08435 PF00296 Luciferase-like monooxygenase AM354_RS08450 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS08455 PF00005 ABC transporter AM354_RS08465 PF00313 'Cold-shock' DNA-binding domain AM354_RS08470 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS08475 PF03358 NADPH-dependent FMN reductase AM354_RS08480 PF03466 LysR substrate binding domain AM354_RS08480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS08485 PF00248 Aldo/keto reductase family AM354_RS08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS08490 PF03466 LysR substrate binding domain AM354_RS08495 PF00107 Zinc-binding dehydrogenase AM354_RS08500 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS08500 PF00107 Zinc-binding dehydrogenase AM354_RS08530 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM354_RS08530 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM354_RS08540 PF01406 tRNA synthetases class I (C) catalytic domain AM354_RS08540 PF09190 DALR domain AM354_RS08545 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM354_RS08550 PF00149 Calcineurin-like phosphoesterase AM354_RS08555 PF00731 AIR carboxylase AM354_RS08560 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM354_RS08560 PF02222 ATP-grasp domain AM354_RS08575 PF00005 ABC transporter AM354_RS08580 PF13472 GDSL-like Lipase/Acylhydrolase family AM354_RS08585 PF00106 short chain dehydrogenase AM354_RS08590 PF00085 Thioredoxin AM354_RS08600 PF00696 Amino acid kinase family AM354_RS08605 PF11392 Protein of unknown function (DUF2877) AM354_RS08610 PF06545 Protein of unknown function (DUF1116) AM354_RS08615 PF00549 CoA-ligase AM354_RS08615 PF02629 CoA binding domain AM354_RS08620 PF02615 Malate/L-lactate dehydrogenase AM354_RS08625 PF01546 Peptidase family M20/M25/M40 AM354_RS08635 PF05899 Protein of unknown function (DUF861) AM354_RS08635 PF07883 Cupin domain AM354_RS08640 PF02595 Glycerate kinase family AM354_RS08645 PF07690 Major Facilitator Superfamily AM354_RS08650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM354_RS08650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM354_RS08655 PF01261 Xylose isomerase-like TIM barrel AM354_RS08660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS08660 PF00205 Thiamine pyrophosphate enzyme, central domain AM354_RS08660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS08665 PF01614 Bacterial transcriptional regulator AM354_RS08665 PF09339 IclR helix-turn-helix domain AM354_RS08670 PF04115 Ureidoglycolate lyase AM354_RS08675 PF03466 LysR substrate binding domain AM354_RS08675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS08680 PF16200 C-terminal region of band_7 AM354_RS08680 PF01145 SPFH domain / Band 7 family AM354_RS08685 PF01957 NfeD-like C-terminal, partner-binding AM354_RS08690 PF13411 MerR HTH family regulatory protein AM354_RS08695 PF00403 Heavy-metal-associated domain AM354_RS08700 PF01963 TraB family AM354_RS08705 PF04073 Aminoacyl-tRNA editing domain AM354_RS08710 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM354_RS08725 PF00550 Phosphopantetheine attachment site AM354_RS08725 PF07993 Male sterility protein AM354_RS08725 PF00668 Condensation domain AM354_RS08725 PF13193 AMP-binding enzyme C-terminal domain AM354_RS08725 PF00501 AMP-binding enzyme AM354_RS08735 PF03301 Tryptophan 2,3-dioxygenase AM354_RS08740 PF00975 Thioesterase domain AM354_RS08745 PF07690 Major Facilitator Superfamily AM354_RS08755 PF02872 5'-nucleotidase, C-terminal domain AM354_RS08755 PF00149 Calcineurin-like phosphoesterase AM354_RS08760 PF07690 Major Facilitator Superfamily AM354_RS08765 PF00999 Sodium/hydrogen exchanger family AM354_RS08765 PF02254 TrkA-N domain AM354_RS08770 PF00294 pfkB family carbohydrate kinase AM354_RS08775 PF00762 Ferrochelatase AM354_RS08780 PF02595 Glycerate kinase family AM354_RS08785 PF02447 GntP family permease AM354_RS08790 PF05651 Putative sugar diacid recognition AM354_RS08790 PF17853 GGDEF-like domain AM354_RS08790 PF13556 PucR C-terminal helix-turn-helix domain AM354_RS08795 PF05191 Adenylate kinase, active site lid AM354_RS08800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS08800 PF00183 Hsp90 protein AM354_RS08805 PF13662 Toprim domain AM354_RS08805 PF02132 RecR protein AM354_RS08810 PF02575 YbaB/EbfC DNA-binding family AM354_RS08815 PF12170 DNA polymerase III tau subunit V interacting with alpha AM354_RS08815 PF12169 DNA polymerase III subunits gamma and tau domain III AM354_RS08815 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM354_RS08820 PF00156 Phosphoribosyl transferase domain AM354_RS08825 PF04304 Protein of unknown function (DUF454) AM354_RS08835 PF10689 Protein of unknown function (DUF2496) AM354_RS08840 PF02635 DsrE/DsrF-like family AM354_RS08845 PF00440 Bacterial regulatory proteins, tetR family AM354_RS08845 PF08361 MAATS-type transcriptional repressor, C-terminal region AM354_RS08850 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS08850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS08855 PF00873 AcrB/AcrD/AcrF family AM354_RS08860 PF01197 Ribosomal protein L31 AM354_RS08865 PF00444 Ribosomal protein L36 AM354_RS08870 PF01297 Zinc-uptake complex component A periplasmic AM354_RS08875 PF00950 ABC 3 transport family AM354_RS08880 PF00005 ABC transporter AM354_RS08890 PF10757 Biofilm formation regulator YbaJ AM354_RS08895 PF05321 Haemolysin expression modulating protein AM354_RS08905 PF18416 N-acetylglucosamine binding protein domain 2 AM354_RS08905 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AM354_RS08910 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM354_RS08915 PF01478 Type IV leader peptidase family AM354_RS08915 PF06750 Bacterial Peptidase A24 N-terminal domain AM354_RS08930 PF03934 Type II secretion system (T2SS), protein K AM354_RS08935 PF11612 Type II secretion system (T2SS), protein J AM354_RS08935 PF07963 Prokaryotic N-terminal methylation motif AM354_RS08940 PF02501 Type II secretion system (T2SS), protein I AM354_RS08940 PF07963 Prokaryotic N-terminal methylation motif AM354_RS08945 PF07963 Prokaryotic N-terminal methylation motif AM354_RS08950 PF07963 Prokaryotic N-terminal methylation motif AM354_RS08950 PF08334 Type II secretion system (T2SS), protein G AM354_RS08955 PF00482 Type II secretion system (T2SS), protein F AM354_RS08960 PF00437 Type II/IV secretion system protein AM354_RS08965 PF00263 Bacterial type II and III secretion system protein AM354_RS08965 PF03958 Bacterial type II/III secretion system short domain AM354_RS08995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM354_RS09000 PF09619 Type III secretion system lipoprotein chaperone (YscW) AM354_RS09010 PF00909 Ammonium Transporter Family AM354_RS09015 PF00543 Nitrogen regulatory protein P-II AM354_RS09020 PF00664 ABC transporter transmembrane region AM354_RS09020 PF00005 ABC transporter AM354_RS09025 PF00664 ABC transporter transmembrane region AM354_RS09025 PF00005 ABC transporter AM354_RS09030 PF13404 AsnC-type helix-turn-helix domain AM354_RS09030 PF01037 Lrp/AsnC ligand binding domain AM354_RS09035 PF00291 Pyridoxal-phosphate dependent enzyme AM354_RS09045 PF12793 Sugar transport-related sRNA regulator N-term AM354_RS09045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS09050 PF06508 Queuosine biosynthesis protein QueC AM354_RS09065 PF13145 PPIC-type PPIASE domain AM354_RS09070 PF00216 Bacterial DNA-binding protein AM354_RS09075 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM354_RS09075 PF00004 ATPase family associated with various cellular activities (AAA) AM354_RS09075 PF05362 Lon protease (S16) C-terminal proteolytic domain AM354_RS09080 PF07724 AAA domain (Cdc48 subfamily) AM354_RS09080 PF10431 C-terminal, D2-small domain, of ClpB protein AM354_RS09080 PF06689 ClpX C4-type zinc finger AM354_RS09085 PF00574 Clp protease AM354_RS09090 PF05697 Bacterial trigger factor protein (TF) AM354_RS09090 PF05698 Bacterial trigger factor protein (TF) C-terminus AM354_RS09090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM354_RS09095 PF01722 BolA-like protein AM354_RS09100 PF03923 Uncharacterized lipoprotein AM354_RS09100 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM354_RS09105 PF07690 Major Facilitator Superfamily AM354_RS09110 PF06481 COX Aromatic Rich Motif AM354_RS09110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM354_RS09115 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM354_RS09120 PF00510 Cytochrome c oxidase subunit III AM354_RS09125 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM354_RS09130 PF01040 UbiA prenyltransferase family AM354_RS09135 PF07690 Major Facilitator Superfamily AM354_RS09140 PF04461 Protein of unknown function (DUF520) AM354_RS09145 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM354_RS09145 PF02558 Ketopantoate reductase PanE/ApbA AM354_RS09150 PF01965 DJ-1/PfpI family AM354_RS09155 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM354_RS09155 PF17287 POTRA domain AM354_RS09155 PF08479 POTRA domain, ShlB-type AM354_RS09160 PF04829 Pre-toxin domain with VENN motif AM354_RS09160 PF05860 haemagglutination activity domain AM354_RS09160 PF13332 Hemagglutinin repeat AM354_RS09160 PF13018 Extended Signal Peptide of Type V secretion system AM354_RS09165 PF02568 Thiamine biosynthesis protein (ThiI) AM354_RS09165 PF02926 THUMP domain AM354_RS09170 PF02609 Exonuclease VII small subunit AM354_RS09175 PF00348 Polyprenyl synthetase AM354_RS09180 PF02780 Transketolase, C-terminal domain AM354_RS09180 PF02779 Transketolase, pyrimidine binding domain AM354_RS09180 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM354_RS09185 PF00248 Aldo/keto reductase family AM354_RS09190 PF04608 Phosphatidylglycerophosphatase A AM354_RS09195 PF00586 AIR synthase related protein, N-terminal domain AM354_RS09195 PF02769 AIR synthase related protein, C-terminal domain AM354_RS09200 PF01029 NusB family AM354_RS09205 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM354_RS09210 PF01872 RibD C-terminal domain AM354_RS09210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM354_RS09215 PF03477 ATP cone domain AM354_RS09220 PF11622 Protein of unknown function (DUF3251) AM354_RS09225 PF07549 SecD/SecF GG Motif AM354_RS09225 PF02355 Protein export membrane protein AM354_RS09230 PF02355 Protein export membrane protein AM354_RS09230 PF07549 SecD/SecF GG Motif AM354_RS09230 PF13721 SecD export protein N-terminal TM region AM354_RS09235 PF02699 Preprotein translocase subunit AM354_RS09240 PF01702 Queuine tRNA-ribosyltransferase AM354_RS09245 PF02547 Queuosine biosynthesis protein AM354_RS09250 PF04336 Acyl carrier protein phosphodiesterase AM354_RS09255 PF00578 AhpC/TSA family AM354_RS09255 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM354_RS09265 PF00128 Alpha amylase, catalytic domain AM354_RS09265 PF02903 Alpha amylase, N-terminal ig-like domain AM354_RS09270 PF00924 Mechanosensitive ion channel AM354_RS09280 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB AM354_RS09285 PF01381 Helix-turn-helix AM354_RS09290 PF00324 Amino acid permease AM354_RS09295 PF05525 Branched-chain amino acid transport protein AM354_RS09300 PF12849 PBP superfamily domain AM354_RS09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS09305 PF00989 PAS fold AM354_RS09305 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS09305 PF11808 Phosphate regulon sensor protein PhoR AM354_RS09310 PF00072 Response regulator receiver domain AM354_RS09310 PF00486 Transcriptional regulatory protein, C terminal AM354_RS09315 PF12320 Type 5 capsule protein repressor C-terminal domain AM354_RS09315 PF00149 Calcineurin-like phosphoesterase AM354_RS09320 PF13476 AAA domain AM354_RS09325 PF03123 CAT RNA binding domain AM354_RS09325 PF00874 PRD domain AM354_RS09340 PF00480 ROK family AM354_RS09345 PF04381 Putative exonuclease, RdgC AM354_RS09350 PF06865 Pyrimidine/purine nucleoside phosphorylase AM354_RS09355 PF07302 AroM protein AM354_RS09370 PF01614 Bacterial transcriptional regulator AM354_RS09370 PF09339 IclR helix-turn-helix domain AM354_RS09380 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS09385 PF00664 ABC transporter transmembrane region AM354_RS09385 PF00005 ABC transporter AM354_RS09390 PF06438 Heme-binding protein A (HasA) AM354_RS09405 PF04542 Sigma-70 region 2 AM354_RS09405 PF08281 Sigma-70, region 4 AM354_RS09410 PF16362 YaiA protein AM354_RS09425 PF01202 Shikimate kinase AM354_RS09430 PF00583 Acetyltransferase (GNAT) family AM354_RS09435 PF00593 TonB dependent receptor AM354_RS09435 PF07715 TonB-dependent Receptor Plug Domain AM354_RS09465 PF00230 Major intrinsic protein AM354_RS09470 PF08241 Methyltransferase domain AM354_RS09480 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) AM354_RS09485 PF13302 Acetyltransferase (GNAT) domain AM354_RS09495 PF04134 Protein of unknown function, DUF393 AM354_RS09505 PF00857 Isochorismatase family AM354_RS09510 PF05726 Pirin C-terminal cupin domain AM354_RS09510 PF02678 Pirin AM354_RS09515 PF03466 LysR substrate binding domain AM354_RS09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS09520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM354_RS09525 PF00455 DeoR C terminal sensor domain AM354_RS09525 PF08220 DeoR-like helix-turn-helix domain AM354_RS09540 PF10696 Protein of unknown function (DUF2501) AM354_RS09545 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AM354_RS09555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS09555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS09555 PF00205 Thiamine pyrophosphate enzyme, central domain AM354_RS09560 PF07759 Protein of unknown function (DUF1615) AM354_RS09565 PF09313 Domain of unknown function (DUF1971) AM354_RS09565 PF03848 Tellurite resistance protein TehB AM354_RS09570 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AM354_RS09575 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM354_RS09575 PF02805 Metal binding domain of Ada AM354_RS09575 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM354_RS09575 PF12833 Helix-turn-helix domain AM354_RS09580 PF01810 LysE type translocator AM354_RS09585 PF00171 Aldehyde dehydrogenase family AM354_RS09590 PF12833 Helix-turn-helix domain AM354_RS09590 PF14525 AraC-binding-like domain AM354_RS09595 PF01323 DSBA-like thioredoxin domain AM354_RS09610 PF02525 Flavodoxin-like fold AM354_RS09615 PF01638 HxlR-like helix-turn-helix AM354_RS09620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS09625 PF01292 Prokaryotic cytochrome b561 AM354_RS09655 PF05154 TM2 domain AM354_RS09660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS09660 PF03466 LysR substrate binding domain AM354_RS09665 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM354_RS09670 PF07690 Major Facilitator Superfamily AM354_RS09675 PF13460 NAD(P)H-binding AM354_RS09675 PF11066 Protein of unknown function (DUF2867) AM354_RS09680 PF03466 LysR substrate binding domain AM354_RS09680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS09685 PF00248 Aldo/keto reductase family AM354_RS09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS09710 PF00672 HAMP domain AM354_RS09710 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS09715 PF00072 Response regulator receiver domain AM354_RS09715 PF00486 Transcriptional regulatory protein, C terminal AM354_RS09720 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM354_RS09725 PF07690 Major Facilitator Superfamily AM354_RS09740 PF13333 Integrase core domain AM354_RS09740 PF13276 HTH-like domain AM354_RS09740 PF00665 Integrase core domain AM354_RS09755 PF13333 Integrase core domain AM354_RS09755 PF00665 Integrase core domain AM354_RS09760 PF00171 Aldehyde dehydrogenase family AM354_RS09765 PF00696 Amino acid kinase family AM354_RS09765 PF01472 PUA domain AM354_RS09770 PF07417 Sigma factor-binding transcriptional regulator Crl AM354_RS09775 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AM354_RS09780 PF00156 Phosphoribosyl transferase domain AM354_RS09785 PF07687 Peptidase dimerisation domain AM354_RS09785 PF01546 Peptidase family M20/M25/M40 AM354_RS09790 PF11798 IMS family HHH motif AM354_RS09790 PF00817 impB/mucB/samB family AM354_RS09790 PF11799 impB/mucB/samB family C-terminal domain AM354_RS09795 PF03009 Glycerophosphoryl diester phosphodiesterase family AM354_RS09810 PF04400 (Na+)-NQR maturation NqrM AM354_RS09815 PF02424 ApbE family AM354_RS09820 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS09820 PF00175 Oxidoreductase NAD-binding domain AM354_RS09820 PF00970 Oxidoreductase FAD-binding domain AM354_RS09825 PF02508 Rnf-Nqr subunit, membrane protein AM354_RS09830 PF02508 Rnf-Nqr subunit, membrane protein AM354_RS09835 PF04205 FMN-binding domain AM354_RS09840 PF03116 NQR2, RnfD, RnfE family AM354_RS09845 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AM354_RS09845 PF11973 NQRA C-terminal domain AM354_RS09850 PF03734 L,D-transpeptidase catalytic domain AM354_RS09855 PF13230 Glutamine amidotransferases class-II AM354_RS09860 PF13580 SIS domain AM354_RS09865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM354_RS09865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM354_RS09865 PF09317 Domain of unknown function (DUF1974) AM354_RS09870 PF01848 Hok/gef family AM354_RS09875 PF01636 Phosphotransferase enzyme family AM354_RS09880 PF01008 Initiation factor 2 subunit family AM354_RS09885 PF03079 ARD/ARD' family AM354_RS09895 PF00596 Class II Aldolase and Adducin N-terminal domain AM354_RS09900 PF00155 Aminotransferase class I and II AM354_RS09905 PF00795 Carbon-nitrogen hydrolase AM354_RS09910 PF07687 Peptidase dimerisation domain AM354_RS09910 PF01546 Peptidase family M20/M25/M40 AM354_RS09915 PF00266 Aminotransferase class-V AM354_RS09930 PF07715 TonB-dependent Receptor Plug Domain AM354_RS09930 PF00593 TonB dependent receptor AM354_RS09940 PF00929 Exonuclease AM354_RS09945 PF00075 RNase H AM354_RS09950 PF08241 Methyltransferase domain AM354_RS09955 PF00753 Metallo-beta-lactamase superfamily AM354_RS09955 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM354_RS09960 PF01464 Transglycosylase SLT domain AM354_RS09960 PF01476 LysM domain AM354_RS09965 PF03372 Endonuclease/Exonuclease/phosphatase family AM354_RS09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS09970 PF03466 LysR substrate binding domain AM354_RS09975 PF00248 Aldo/keto reductase family AM354_RS10010 PF10431 C-terminal, D2-small domain, of ClpB protein AM354_RS10010 PF02861 Clp amino terminal domain, pathogenicity island component AM354_RS10010 PF07724 AAA domain (Cdc48 subfamily) AM354_RS10010 PF00004 ATPase family associated with various cellular activities (AAA) AM354_RS10010 PF17871 AAA lid domain AM354_RS10015 PF02578 Multi-copper polyphenol oxidoreductase laccase AM354_RS10020 PF00849 RNA pseudouridylate synthase AM354_RS10020 PF01479 S4 domain AM354_RS10030 PF13525 Outer membrane lipoprotein AM354_RS10035 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM354_RS10045 PF01817 Chorismate mutase type II AM354_RS10045 PF00800 Prephenate dehydratase AM354_RS10050 PF02153 Prephenate dehydrogenase AM354_RS10050 PF01817 Chorismate mutase type II AM354_RS10055 PF00793 DAHP synthetase I family AM354_RS10060 PF04338 Protein of unknown function, DUF481 AM354_RS10075 PF04606 Ogr/Delta-like zinc finger AM354_RS10080 PF01245 Ribosomal protein L19 AM354_RS10085 PF01746 tRNA (Guanine-1)-methyltransferase AM354_RS10090 PF05239 PRC-barrel domain AM354_RS10090 PF01782 RimM N-terminal domain AM354_RS10095 PF00886 Ribosomal protein S16 AM354_RS10100 PF02978 Signal peptide binding domain AM354_RS10100 PF02881 SRP54-type protein, helical bundle domain AM354_RS10100 PF00448 SRP54-type protein, GTPase domain AM354_RS10105 PF01578 Cytochrome C assembly protein AM354_RS10110 PF03471 Transporter associated domain AM354_RS10110 PF01595 Cyclin M transmembrane N-terminal domain AM354_RS10110 PF00571 CBS domain AM354_RS10115 PF02664 S-Ribosylhomocysteinase (LuxS) AM354_RS10120 PF04262 Glutamate-cysteine ligase AM354_RS10125 PF09335 SNARE associated Golgi protein AM354_RS10130 PF13419 Haloacid dehalogenase-like hydrolase AM354_RS10160 PF02599 Global regulator protein family AM354_RS10165 PF01411 tRNA synthetases class II (A) AM354_RS10165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM354_RS10165 PF02272 DHHA1 domain AM354_RS10170 PF02631 RecX family AM354_RS10175 PF00154 recA bacterial DNA recombination protein AM354_RS10180 PF02464 Competence-damaged protein AM354_RS10185 PF07690 Major Facilitator Superfamily AM354_RS10190 PF04794 YdjC-like protein AM354_RS10195 PF12833 Helix-turn-helix domain AM354_RS10195 PF07883 Cupin domain AM354_RS10200 PF00232 Glycosyl hydrolase family 1 AM354_RS10205 PF02378 Phosphotransferase system, EIIC AM354_RS10210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM354_RS10215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS10215 PF03466 LysR substrate binding domain AM354_RS10225 PF00248 Aldo/keto reductase family AM354_RS10240 PF05192 MutS domain III AM354_RS10240 PF05190 MutS family domain IV AM354_RS10240 PF01624 MutS domain I AM354_RS10240 PF00488 MutS domain V AM354_RS10240 PF05188 MutS domain II AM354_RS10245 PF04539 Sigma-70 region 3 AM354_RS10245 PF04542 Sigma-70 region 2 AM354_RS10245 PF00140 Sigma-70 factor, region 1.2 AM354_RS10245 PF04545 Sigma-70, region 4 AM354_RS10250 PF01476 LysM domain AM354_RS10250 PF01551 Peptidase family M23 AM354_RS10260 PF01975 Survival protein SurE AM354_RS10265 PF01142 tRNA pseudouridine synthase D (TruD) AM354_RS10270 PF02542 YgbB family AM354_RS10275 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM354_RS10280 PF04977 Septum formation initiator AM354_RS10285 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS10290 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS10295 PF00005 ABC transporter AM354_RS10300 PF12084 Protein of unknown function (DUF3561) AM354_RS10310 PF00009 Elongation factor Tu GTP binding domain AM354_RS10315 PF01507 Phosphoadenosine phosphosulfate reductase family AM354_RS10320 PF10414 Sirohaem synthase dimerisation region AM354_RS10320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM354_RS10320 PF14824 Sirohaem biosynthesis protein central AM354_RS10325 PF04389 Peptidase family M28 AM354_RS10330 PF01507 Phosphoadenosine phosphosulfate reductase family AM354_RS10335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM354_RS10335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM354_RS10340 PF00667 FAD binding domain AM354_RS10340 PF00175 Oxidoreductase NAD-binding domain AM354_RS10340 PF00258 Flavodoxin AM354_RS10345 PF01242 6-pyruvoyl tetrahydropterin synthase AM354_RS10350 PF04055 Radical SAM superfamily AM354_RS10355 PF07690 Major Facilitator Superfamily AM354_RS10360 PF17391 Urocanase N-terminal domain AM354_RS10360 PF17392 Urocanase C-terminal domain AM354_RS10360 PF01175 Urocanase Rossmann-like domain AM354_RS10365 PF00221 Aromatic amino acid lyase AM354_RS10370 PF00324 Amino acid permease AM354_RS10375 PF01053 Cys/Met metabolism PLP-dependent enzyme AM354_RS10390 PF03952 Enolase, N-terminal domain AM354_RS10390 PF00113 Enolase, C-terminal TIM barrel domain AM354_RS10395 PF06418 CTP synthase N-terminus AM354_RS10395 PF00117 Glutamine amidotransferase class-I AM354_RS10400 PF03819 MazG nucleotide pyrophosphohydrolase domain AM354_RS10405 PF04607 Region found in RelA / SpoT proteins AM354_RS10405 PF13291 ACT domain AM354_RS10405 PF02824 TGS domain AM354_RS10410 PF01938 TRAM domain AM354_RS10410 PF05958 tRNA (Uracil-5-)-methyltransferase AM354_RS10415 PF01627 Hpt domain AM354_RS10415 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS10415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM354_RS10415 PF00672 HAMP domain AM354_RS10415 PF00072 Response regulator receiver domain AM354_RS10420 PF00595 PDZ domain AM354_RS10425 PF13286 Phosphohydrolase-associated domain AM354_RS10425 PF01966 HD domain AM354_RS10430 PF01048 Phosphorylase superfamily AM354_RS10435 PF01497 Periplasmic binding protein AM354_RS10440 PF03458 UPF0126 domain AM354_RS10450 PF01521 Iron-sulphur cluster biosynthesis AM354_RS10455 PF00654 Voltage gated chloride channel AM354_RS10460 PF00202 Aminotransferase class-III AM354_RS10465 PF17113 Regulatory signalling modulator protein AmpE AM354_RS10470 PF01510 N-acetylmuramoyl-L-alanine amidase AM354_RS10475 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM354_RS10475 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM354_RS10480 PF07963 Prokaryotic N-terminal methylation motif AM354_RS10485 PF00437 Type II/IV secretion system protein AM354_RS10485 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM354_RS10490 PF00482 Type II secretion system (T2SS), protein F AM354_RS10495 PF00478 IMP dehydrogenase / GMP reductase domain AM354_RS10500 PF01121 Dephospho-CoA kinase AM354_RS10505 PF07072 Cell division protein AM354_RS10510 PF03884 DNA gyrase inhibitor YacG AM354_RS10515 PF00293 NUDIX domain AM354_RS10520 PF01043 SecA preprotein cross-linking domain AM354_RS10520 PF02810 SEC-C motif AM354_RS10520 PF07516 SecA Wing and Scaffold domain AM354_RS10520 PF07517 SecA DEAD-like domain AM354_RS10525 PF06558 Secretion monitor precursor protein (SecM) AM354_RS10535 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM354_RS10540 PF12327 FtsZ family, C-terminal domain AM354_RS10540 PF00091 Tubulin/FtsZ family, GTPase domain AM354_RS10545 PF02491 SHS2 domain inserted in FTSA AM354_RS10550 PF08478 POTRA domain, FtsQ-type AM354_RS10550 PF03799 Cell division protein FtsQ AM354_RS10555 PF07478 D-ala D-ala ligase C-terminus AM354_RS10555 PF01820 D-ala D-ala ligase N-terminus AM354_RS10560 PF08245 Mur ligase middle domain AM354_RS10560 PF01225 Mur ligase family, catalytic domain AM354_RS10560 PF02875 Mur ligase family, glutamate ligase domain AM354_RS10565 PF04101 Glycosyltransferase family 28 C-terminal domain AM354_RS10565 PF03033 Glycosyltransferase family 28 N-terminal domain AM354_RS10570 PF01098 Cell cycle protein AM354_RS10575 PF02875 Mur ligase family, glutamate ligase domain AM354_RS10575 PF08245 Mur ligase middle domain AM354_RS10580 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM354_RS10580 PF00953 Glycosyl transferase family 4 AM354_RS10585 PF08245 Mur ligase middle domain AM354_RS10585 PF02875 Mur ligase family, glutamate ligase domain AM354_RS10585 PF01225 Mur ligase family, catalytic domain AM354_RS10590 PF08245 Mur ligase middle domain AM354_RS10590 PF01225 Mur ligase family, catalytic domain AM354_RS10590 PF02875 Mur ligase family, glutamate ligase domain AM354_RS10595 PF00905 Penicillin binding protein transpeptidase domain AM354_RS10595 PF03717 Penicillin-binding Protein dimerisation domain AM354_RS10600 PF04999 Cell division protein FtsL AM354_RS10605 PF01795 MraW methylase family AM354_RS10610 PF02381 MraZ protein, putative antitoxin-like AM354_RS10615 PF06610 L-alanine exporter AM354_RS10620 PF00356 Bacterial regulatory proteins, lacI family AM354_RS10620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM354_RS10625 PF10369 Small subunit of acetolactate synthase AM354_RS10630 PF00205 Thiamine pyrophosphate enzyme, central domain AM354_RS10630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS10630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS10635 PF00501 AMP-binding enzyme AM354_RS10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS10640 PF03466 LysR substrate binding domain AM354_RS10645 PF00682 HMGL-like AM354_RS10645 PF08502 LeuA allosteric (dimerisation) domain AM354_RS10650 PF00180 Isocitrate/isopropylmalate dehydrogenase AM354_RS10655 PF00330 Aconitase family (aconitate hydratase) AM354_RS10660 PF00694 Aconitase C-terminal domain AM354_RS10665 PF00939 Sodium:sulfate symporter transmembrane region AM354_RS10670 PF07690 Major Facilitator Superfamily AM354_RS10680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS10680 PF12793 Sugar transport-related sRNA regulator N-term AM354_RS10690 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS10695 PF00005 ABC transporter AM354_RS10705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS10705 PF00205 Thiamine pyrophosphate enzyme, central domain AM354_RS10705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS10710 PF01842 ACT domain AM354_RS10715 PF09335 SNARE associated Golgi protein AM354_RS10720 PF00136 DNA polymerase family B AM354_RS10720 PF03104 DNA polymerase family B, exonuclease domain AM354_RS10725 PF12137 RNA polymerase recycling family C-terminal AM354_RS10725 PF00176 SNF2 family N-terminal domain AM354_RS10725 PF18339 RapA N-terminal Tudor like domain 1 AM354_RS10725 PF18337 RapA N-terminal Tudor like domain AM354_RS10725 PF00271 Helicase conserved C-terminal domain AM354_RS10730 PF00849 RNA pseudouridylate synthase AM354_RS10735 PF05099 Tellurite resistance protein TerB AM354_RS10735 PF00226 DnaJ domain AM354_RS10740 PF03968 OstA-like protein AM354_RS10740 PF04453 LPS transport system D AM354_RS10745 PF00639 PPIC-type PPIASE domain AM354_RS10745 PF09312 SurA N-terminal domain AM354_RS10750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM354_RS10755 PF00398 Ribosomal RNA adenine dimethylase AM354_RS10760 PF04379 ApaG domain AM354_RS10765 PF00149 Calcineurin-like phosphoesterase AM354_RS10775 PF00186 Dihydrofolate reductase AM354_RS10780 PF12821 Threonine/Serine exporter, ThrE AM354_RS10785 PF06738 Putative threonine/serine exporter AM354_RS10790 PF01810 LysE type translocator AM354_RS10795 PF00999 Sodium/hydrogen exchanger family AM354_RS10795 PF02254 TrkA-N domain AM354_RS10800 PF02525 Flavodoxin-like fold AM354_RS10805 PF02142 MGS-like domain AM354_RS10805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM354_RS10805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM354_RS10810 PF00117 Glutamine amidotransferase class-I AM354_RS10810 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM354_RS10815 PF05173 Dihydrodipicolinate reductase, C-terminus AM354_RS10815 PF01113 Dihydrodipicolinate reductase, N-terminus AM354_RS10820 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AM354_RS10825 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM354_RS10835 PF03466 LysR substrate binding domain AM354_RS10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS10840 PF02401 LytB protein AM354_RS10845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM354_RS10850 PF01252 Signal peptidase (SPase) II AM354_RS10855 PF00133 tRNA synthetases class I (I, L, M and V) AM354_RS10855 PF08264 Anticodon-binding domain of tRNA AM354_RS10855 PF06827 Zinc finger found in FPG and IleRS AM354_RS10860 PF01687 Riboflavin kinase AM354_RS10860 PF06574 FAD synthetase AM354_RS10865 PF01649 Ribosomal protein S20 AM354_RS10870 PF03466 LysR substrate binding domain AM354_RS10870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS10875 PF06965 Na+/H+ antiporter 1 AM354_RS10880 PF01556 DnaJ C terminal domain AM354_RS10880 PF00226 DnaJ domain AM354_RS10880 PF00684 DnaJ central domain AM354_RS10885 PF00012 Hsp70 protein AM354_RS10890 PF01184 GPR1/FUN34/yaaH family AM354_RS10895 PF07690 Major Facilitator Superfamily AM354_RS10900 PF00994 Probable molybdopterin binding domain AM354_RS10905 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM354_RS10910 PF01235 Sodium:alanine symporter family AM354_RS10915 PF03883 Peroxide stress protein YaaA AM354_RS10920 PF14821 Threonine synthase N terminus AM354_RS10920 PF00291 Pyridoxal-phosphate dependent enzyme AM354_RS10925 PF08544 GHMP kinases C terminal AM354_RS10925 PF00288 GHMP kinases N terminal domain AM354_RS10930 PF03447 Homoserine dehydrogenase, NAD binding domain AM354_RS10930 PF13840 ACT domain AM354_RS10930 PF00696 Amino acid kinase family AM354_RS10930 PF01842 ACT domain AM354_RS10930 PF00742 Homoserine dehydrogenase AM354_RS10935 PF08254 Threonine leader peptide AM354_RS10940 PF00588 SpoU rRNA Methylase family AM354_RS10945 PF00072 Response regulator receiver domain AM354_RS10945 PF00486 Transcriptional regulatory protein, C terminal AM354_RS10950 PF05981 CreA protein AM354_RS10955 PF12833 Helix-turn-helix domain AM354_RS10955 PF06445 GyrI-like small molecule binding domain AM354_RS10960 PF00300 Histidine phosphatase superfamily (branch 1) AM354_RS10965 PF01931 Protein of unknown function DUF84 AM354_RS10970 PF01371 Trp repressor protein AM354_RS10975 PF01464 Transglycosylase SLT domain AM354_RS10975 PF14718 Soluble lytic murein transglycosylase L domain AM354_RS10980 PF13689 YfiR/HmsC-like AM354_RS10985 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS10985 PF17152 Periplasmic sensor domain AM354_RS10990 PF00691 OmpA family AM354_RS10995 PF12848 ABC transporter AM354_RS10995 PF00005 ABC transporter AM354_RS11000 PF12833 Helix-turn-helix domain AM354_RS11000 PF12852 Cupin AM354_RS11005 PF00106 short chain dehydrogenase AM354_RS11010 PF16884 N-terminal domain of oxidoreductase AM354_RS11010 PF00107 Zinc-binding dehydrogenase AM354_RS11015 PF03466 LysR substrate binding domain AM354_RS11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS11020 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS11020 PF00107 Zinc-binding dehydrogenase AM354_RS11030 PF01381 Helix-turn-helix AM354_RS11030 PF13521 AAA domain AM354_RS11035 PF18073 Rubredoxin metal binding domain AM354_RS11040 PF18429 Domain of unknown function (DUF5609) AM354_RS11045 PF10144 Bacterial virulence factor haemolysin AM354_RS11050 PF01048 Phosphorylase superfamily AM354_RS11055 PF01676 Metalloenzyme superfamily AM354_RS11060 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM354_RS11060 PF00591 Glycosyl transferase family, a/b domain AM354_RS11060 PF02885 Glycosyl transferase family, helical bundle domain AM354_RS11065 PF01791 DeoC/LacD family aldolase AM354_RS11070 PF01773 Na+ dependent nucleoside transporter N-terminus AM354_RS11070 PF07662 Na+ dependent nucleoside transporter C-terminus AM354_RS11070 PF07670 Nucleoside recognition AM354_RS11075 PF01026 TatD related DNase AM354_RS11080 PF01734 Patatin-like phospholipase AM354_RS11085 PF05532 CsbD-like AM354_RS11090 PF07043 Protein of unknown function (DUF1328) AM354_RS11095 PF04972 BON domain AM354_RS11100 PF00009 Elongation factor Tu GTP binding domain AM354_RS11100 PF16658 Class II release factor RF3, C-terminal domain AM354_RS11100 PF03144 Elongation factor Tu domain 2 AM354_RS11105 PF00583 Acetyltransferase (GNAT) family AM354_RS11110 PF03603 DNA polymerase III psi subunit AM354_RS11115 PF08468 Methyltransferase small domain N-terminal AM354_RS11115 PF05175 Methyltransferase small domain AM354_RS11120 PF00248 Aldo/keto reductase family AM354_RS11125 PF03466 LysR substrate binding domain AM354_RS11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS11145 PF07256 Protein of unknown function (DUF1435) AM354_RS11150 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS11155 PF00440 Bacterial regulatory proteins, tetR family AM354_RS11165 PF03466 LysR substrate binding domain AM354_RS11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS11170 PF07690 Major Facilitator Superfamily AM354_RS11175 PF07690 Major Facilitator Superfamily AM354_RS11180 PF05336 L-rhamnose mutarotase AM354_RS11190 PF04909 Amidohydrolase AM354_RS11195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM354_RS11195 PF13378 Enolase C-terminal domain-like AM354_RS11200 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM354_RS11210 PF00392 Bacterial regulatory proteins, gntR family AM354_RS11210 PF07729 FCD domain AM354_RS11215 PF00144 Beta-lactamase AM354_RS11220 PF01613 Flavin reductase like domain AM354_RS11225 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AM354_RS11225 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AM354_RS11235 PF07690 Major Facilitator Superfamily AM354_RS11240 PF03328 HpcH/HpaI aldolase/citrate lyase family AM354_RS11245 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM354_RS11250 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AM354_RS11255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM354_RS11260 PF00171 Aldehyde dehydrogenase family AM354_RS11265 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM354_RS11270 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM354_RS11275 PF01047 MarR family AM354_RS11285 PF10703 MoaF N-terminal domain AM354_RS11285 PF17409 MoaF C-terminal domain AM354_RS11300 PF00324 Amino acid permease AM354_RS11305 PF04055 Radical SAM superfamily AM354_RS11310 PF00884 Sulfatase AM354_RS11315 PF00196 Bacterial regulatory proteins, luxR family AM354_RS11325 PF00850 Histone deacetylase domain AM354_RS11330 PF12146 Serine aminopeptidase, S33 AM354_RS11340 PF01266 FAD dependent oxidoreductase AM354_RS11345 PF00196 Bacterial regulatory proteins, luxR family AM354_RS11350 PF00465 Iron-containing alcohol dehydrogenase AM354_RS11355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS11355 PF03466 LysR substrate binding domain AM354_RS11360 PF00202 Aminotransferase class-III AM354_RS11365 PF00171 Aldehyde dehydrogenase family AM354_RS11375 PF03576 Peptidase family S58 AM354_RS11385 PF01618 MotA/TolQ/ExbB proton channel family AM354_RS11400 PF02472 Biopolymer transport protein ExbD/TolR AM354_RS11405 PF07715 TonB-dependent Receptor Plug Domain AM354_RS11405 PF00593 TonB dependent receptor AM354_RS11410 PF17969 L,D-transpeptidase C-terminal domain AM354_RS11410 PF03734 L,D-transpeptidase catalytic domain AM354_RS11415 PF06445 GyrI-like small molecule binding domain AM354_RS11415 PF12833 Helix-turn-helix domain AM354_RS11425 PF02311 AraC-like ligand binding domain AM354_RS11425 PF12833 Helix-turn-helix domain AM354_RS11435 PF00106 short chain dehydrogenase AM354_RS11445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM354_RS11445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM354_RS11450 PF02803 Thiolase, C-terminal domain AM354_RS11450 PF00108 Thiolase, N-terminal domain AM354_RS11455 PF01144 Coenzyme A transferase AM354_RS11460 PF01144 Coenzyme A transferase AM354_RS11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS11465 PF03466 LysR substrate binding domain AM354_RS11485 PF00120 Glutamine synthetase, catalytic domain AM354_RS11495 PF00982 Glycosyltransferase family 20 AM354_RS11505 PF00005 ABC transporter AM354_RS11510 PF00267 Gram-negative porin AM354_RS11515 PF00005 ABC transporter AM354_RS11520 PF02308 MgtC family AM354_RS11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS11525 PF03466 LysR substrate binding domain AM354_RS11530 PF02554 Carbon starvation protein CstA AM354_RS11530 PF13722 5TM C-terminal transporter carbon starvation CstA AM354_RS11535 PF04328 Selenoprotein, putative AM354_RS11540 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM354_RS11540 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM354_RS11550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM354_RS11560 PF00483 Nucleotidyl transferase AM354_RS11565 PF16363 GDP-mannose 4,6 dehydratase AM354_RS11570 PF00356 Bacterial regulatory proteins, lacI family AM354_RS11575 PF02378 Phosphotransferase system, EIIC AM354_RS11575 PF00367 phosphotransferase system, EIIB AM354_RS11580 PF00232 Glycosyl hydrolase family 1 AM354_RS11585 PF03852 DNA mismatch endonuclease Vsr AM354_RS11590 PF00145 C-5 cytosine-specific DNA methylase AM354_RS11610 PF01119 DNA mismatch repair protein, C-terminal domain AM354_RS11610 PF08676 MutL C terminal dimerisation domain AM354_RS11615 PF03979 Sigma-70 factor, region 1.1 AM354_RS11615 PF04546 Sigma-70, non-essential region AM354_RS11615 PF04545 Sigma-70, region 4 AM354_RS11615 PF04539 Sigma-70 region 3 AM354_RS11615 PF04542 Sigma-70 region 2 AM354_RS11615 PF00140 Sigma-70 factor, region 1.2 AM354_RS11625 PF08220 DeoR-like helix-turn-helix domain AM354_RS11625 PF00455 DeoR C terminal sensor domain AM354_RS11630 PF01370 NAD dependent epimerase/dehydratase family AM354_RS11635 PF02447 GntP family permease AM354_RS11640 PF01791 DeoC/LacD family aldolase AM354_RS11645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM354_RS11645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM354_RS11650 PF07690 Major Facilitator Superfamily AM354_RS11660 PF00765 Autoinducer synthase AM354_RS11665 PF00196 Bacterial regulatory proteins, luxR family AM354_RS11665 PF03472 Autoinducer binding domain AM354_RS11670 PF00455 DeoR C terminal sensor domain AM354_RS11670 PF08220 DeoR-like helix-turn-helix domain AM354_RS11675 PF03739 Lipopolysaccharide export system permease LptF/LptG AM354_RS11680 PF03739 Lipopolysaccharide export system permease LptF/LptG AM354_RS11685 PF02789 Cytosol aminopeptidase family, N-terminal domain AM354_RS11685 PF00883 Cytosol aminopeptidase family, catalytic domain AM354_RS11690 PF04364 DNA polymerase III chi subunit, HolC AM354_RS11695 PF10458 Valyl tRNA synthetase tRNA binding arm AM354_RS11695 PF00133 tRNA synthetases class I (I, L, M and V) AM354_RS11695 PF08264 Anticodon-binding domain of tRNA AM354_RS11700 PF00583 Acetyltransferase (GNAT) family AM354_RS11705 PF05199 GMC oxidoreductase AM354_RS11705 PF00732 GMC oxidoreductase AM354_RS11710 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AM354_RS11715 PF06877 Regulator of ribonuclease activity B AM354_RS11720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM354_RS11720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM354_RS11725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS11730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM354_RS11730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM354_RS11735 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AM354_RS11735 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AM354_RS11740 PF01042 Endoribonuclease L-PSP AM354_RS11745 PF00501 AMP-binding enzyme AM354_RS11745 PF07993 Male sterility protein AM354_RS11745 PF00550 Phosphopantetheine attachment site AM354_RS11745 PF13193 AMP-binding enzyme C-terminal domain AM354_RS11745 PF00668 Condensation domain AM354_RS11750 PF07691 PA14 domain AM354_RS11750 PF00728 Glycosyl hydrolase family 20, catalytic domain AM354_RS11750 PF02838 Glycosyl hydrolase family 20, domain 2 AM354_RS11755 PF00690 Cation transporter/ATPase, N-terminus AM354_RS11755 PF00689 Cation transporting ATPase, C-terminus AM354_RS11760 PF00356 Bacterial regulatory proteins, lacI family AM354_RS11765 PF02378 Phosphotransferase system, EIIC AM354_RS11765 PF00367 phosphotransferase system, EIIB AM354_RS11770 PF00128 Alpha amylase, catalytic domain AM354_RS11770 PF11941 Domain of unknown function (DUF3459) AM354_RS11775 PF02525 Flavodoxin-like fold AM354_RS11780 PF03466 LysR substrate binding domain AM354_RS11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS11785 PF13597 Anaerobic ribonucleoside-triphosphate reductase AM354_RS11785 PF03477 ATP cone domain AM354_RS11810 PF03773 Predicted permease AM354_RS11815 PF07702 UTRA domain AM354_RS11815 PF00392 Bacterial regulatory proteins, gntR family AM354_RS11820 PF06754 Phosphonate metabolism protein PhnG AM354_RS11825 PF05845 Bacterial phosphonate metabolism protein (PhnH) AM354_RS11830 PF05861 Bacterial phosphonate metabolism protein (PhnI) AM354_RS11835 PF06007 Phosphonate metabolism protein PhnJ AM354_RS11840 PF00005 ABC transporter AM354_RS11845 PF00005 ABC transporter AM354_RS11850 PF07969 Amidohydrolase family AM354_RS11865 PF12706 Beta-lactamase superfamily domain AM354_RS11870 PF13460 NAD(P)H-binding AM354_RS11880 PF10940 Protein of unknown function (DUF2618) AM354_RS11885 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM354_RS11885 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM354_RS11885 PF01276 Orn/Lys/Arg decarboxylase, major domain AM354_RS11890 PF13520 Amino acid permease AM354_RS11895 PF01541 GIY-YIG catalytic domain AM354_RS11900 PF13508 Acetyltransferase (GNAT) domain AM354_RS11905 PF02036 SCP-2 sterol transfer family AM354_RS11910 PF01136 Peptidase family U32 AM354_RS11915 PF01136 Peptidase family U32 AM354_RS11935 PF00296 Luciferase-like monooxygenase AM354_RS11940 PF01206 Sulfurtransferase TusA AM354_RS11945 PF04143 Sulphur transport AM354_RS11950 PF00270 DEAD/DEAH box helicase AM354_RS11950 PF03880 DbpA RNA binding domain AM354_RS11950 PF00271 Helicase conserved C-terminal domain AM354_RS11950 PF12343 Cold shock protein DEAD box A AM354_RS11960 PF13181 Tetratricopeptide repeat AM354_RS11960 PF07719 Tetratricopeptide repeat AM354_RS11965 PF01138 3' exoribonuclease family, domain 1 AM354_RS11965 PF03725 3' exoribonuclease family, domain 2 AM354_RS11965 PF00575 S1 RNA binding domain AM354_RS11965 PF00013 KH domain AM354_RS11965 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM354_RS11975 PF00312 Ribosomal protein S15 AM354_RS11980 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM354_RS11980 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM354_RS11980 PF09157 Pseudouridine synthase II TruB, C-terminal AM354_RS11985 PF02033 Ribosome-binding factor A AM354_RS11990 PF00009 Elongation factor Tu GTP binding domain AM354_RS11990 PF11987 Translation-initiation factor 2 AM354_RS11990 PF08364 Bacterial translation initiation factor IF-2 associated region AM354_RS11990 PF04760 Translation initiation factor IF-2, N-terminal region AM354_RS11995 PF13184 NusA-like KH domain AM354_RS11995 PF00575 S1 RNA binding domain AM354_RS11995 PF08529 NusA N-terminal domain AM354_RS12000 PF17384 RimP C-terminal SH3 domain AM354_RS12000 PF02576 RimP N-terminal domain AM354_RS12015 PF03840 Preprotein translocase SecG subunit AM354_RS12020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM354_RS12020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM354_RS12020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM354_RS12020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM354_RS12025 PF00809 Pterin binding enzyme AM354_RS12030 PF06480 FtsH Extracellular AM354_RS12030 PF00004 ATPase family associated with various cellular activities (AAA) AM354_RS12030 PF01434 Peptidase family M41 AM354_RS12030 PF17862 AAA+ lid domain AM354_RS12035 PF01728 FtsJ-like methyltransferase AM354_RS12040 PF01985 CRS1 / YhbY (CRM) domain AM354_RS12045 PF03449 Transcription elongation factor, N-terminal AM354_RS12045 PF01272 Transcription elongation factor, GreA/GreB, C-term AM354_RS12050 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM354_RS12055 PF00072 Response regulator receiver domain AM354_RS12055 PF00486 Transcriptional regulatory protein, C terminal AM354_RS12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS12060 PF00672 HAMP domain AM354_RS12060 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS12065 PF13333 Integrase core domain AM354_RS12065 PF00665 Integrase core domain AM354_RS12080 PF13333 Integrase core domain AM354_RS12080 PF00665 Integrase core domain AM354_RS12080 PF13276 HTH-like domain AM354_RS12090 PF01018 GTP1/OBG AM354_RS12090 PF01926 50S ribosome-binding GTPase AM354_RS12095 PF00892 EamA-like transporter family AM354_RS12100 PF01016 Ribosomal L27 protein AM354_RS12105 PF00829 Ribosomal prokaryotic L21 protein AM354_RS12110 PF00348 Polyprenyl synthetase AM354_RS12120 PF13693 Winged helix-turn-helix DNA-binding AM354_RS12125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM354_RS12125 PF00056 lactate/malate dehydrogenase, NAD binding domain AM354_RS12130 PF01316 Arginine repressor, DNA binding domain AM354_RS12130 PF02863 Arginine repressor, C-terminal domain AM354_RS12145 PF02875 Mur ligase family, glutamate ligase domain AM354_RS12145 PF01225 Mur ligase family, catalytic domain AM354_RS12145 PF08245 Mur ligase middle domain AM354_RS12150 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM354_RS12155 PF00672 HAMP domain AM354_RS12155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM354_RS12155 PF02203 Tar ligand binding domain homologue AM354_RS12160 PF00719 Inorganic pyrophosphatase AM354_RS12165 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AM354_RS12170 PF04357 TamB, inner membrane protein subunit of TAM complex AM354_RS12175 PF01103 Surface antigen AM354_RS12175 PF07244 Surface antigen variable number repeat AM354_RS12175 PF17243 POTRA domain TamA domain 1 AM354_RS12180 PF01625 Peptide methionine sulfoxide reductase AM354_RS12185 PF03471 Transporter associated domain AM354_RS12185 PF00571 CBS domain AM354_RS12185 PF01595 Cyclin M transmembrane N-terminal domain AM354_RS12190 PF06526 Protein of unknown function (DUF1107) AM354_RS12195 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM354_RS12200 PF00459 Inositol monophosphatase family AM354_RS12205 PF02872 5'-nucleotidase, C-terminal domain AM354_RS12205 PF00149 Calcineurin-like phosphoesterase AM354_RS12210 PF01814 Hemerythrin HHE cation binding domain AM354_RS12210 PF04405 Domain of Unknown function (DUF542) AM354_RS12215 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM354_RS12215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM354_RS12220 PF04225 Opacity-associated protein A LysM-like domain AM354_RS12220 PF08525 Opacity-associated protein A N-terminal motif AM354_RS12230 PF03948 Ribosomal protein L9, C-terminal domain AM354_RS12230 PF01281 Ribosomal protein L9, N-terminal domain AM354_RS12235 PF01084 Ribosomal protein S18 AM354_RS12240 PF00436 Single-strand binding protein family AM354_RS12245 PF01250 Ribosomal protein S6 AM354_RS12260 PF00326 Prolyl oligopeptidase family AM354_RS12265 PF07338 Protein of unknown function (DUF1471) AM354_RS12275 PF03994 Domain of Unknown Function (DUF350) AM354_RS12280 PF02770 Acyl-CoA dehydrogenase, middle domain AM354_RS12280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM354_RS12280 PF18158 Adaptive response protein AidB N-terminal domain AM354_RS12285 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM354_RS12285 PF00588 SpoU rRNA Methylase family AM354_RS12290 PF17876 Cold shock domain AM354_RS12290 PF08461 Ribonuclease R winged-helix domain AM354_RS12290 PF00773 RNB domain AM354_RS12290 PF08206 Ribonuclease B OB domain AM354_RS12290 PF00575 S1 RNA binding domain AM354_RS12295 PF02082 Transcriptional regulator AM354_RS12300 PF00709 Adenylosuccinate synthetase AM354_RS12305 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AM354_RS12310 PF01145 SPFH domain / Band 7 family AM354_RS12315 PF12221 Bacterial membrane protein N terminal AM354_RS12315 PF01145 SPFH domain / Band 7 family AM354_RS12320 PF01926 50S ribosome-binding GTPase AM354_RS12320 PF16360 GTP-binding GTPase Middle Region AM354_RS12320 PF13167 GTP-binding GTPase N-terminal AM354_RS12325 PF17209 Hfq protein AM354_RS12335 PF01119 DNA mismatch repair protein, C-terminal domain AM354_RS12335 PF08676 MutL C terminal dimerisation domain AM354_RS12340 PF01520 N-acetylmuramoyl-L-alanine amidase AM354_RS12345 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM354_RS12350 PF03853 YjeF-related protein N-terminus AM354_RS12350 PF01256 Carbohydrate kinase AM354_RS12355 PF08331 Domain of unknown function (DUF1730) AM354_RS12375 PF00929 Exonuclease AM354_RS12380 PF03193 RsgA GTPase AM354_RS12385 PF02666 Phosphatidylserine decarboxylase AM354_RS12390 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM354_RS12390 PF00924 Mechanosensitive ion channel AM354_RS12390 PF12795 Mechanosensitive ion channel porin domain AM354_RS12395 PF00152 tRNA synthetases class II (D, K and N) AM354_RS12400 PF00890 FAD binding domain AM354_RS12400 PF02910 Fumarate reductase flavoprotein C-term AM354_RS12405 PF13183 4Fe-4S dicluster domain AM354_RS12405 PF13085 2Fe-2S iron-sulfur cluster binding domain AM354_RS12410 PF02300 Fumarate reductase subunit C AM354_RS12415 PF02313 Fumarate reductase subunit D AM354_RS12420 PF08212 Lipocalin-like domain AM354_RS12425 PF00893 Small Multidrug Resistance protein AM354_RS12430 PF08085 Entericidin EcnA/B family AM354_RS12435 PF08085 Entericidin EcnA/B family AM354_RS12440 PF01132 Elongation factor P (EF-P) OB domain AM354_RS12440 PF09285 Elongation factor P, C-terminal AM354_RS12440 PF08207 Elongation factor P (EF-P) KOW-like domain AM354_RS12445 PF04055 Radical SAM superfamily AM354_RS12450 PF13698 Domain of unknown function (DUF4156) AM354_RS12455 PF00672 HAMP domain AM354_RS12455 PF02203 Tar ligand binding domain homologue AM354_RS12455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM354_RS12460 PF00118 TCP-1/cpn60 chaperonin family AM354_RS12465 PF00166 Chaperonin 10 Kd subunit AM354_RS12470 PF04186 FxsA cytoplasmic membrane protein AM354_RS12475 PF00206 Lyase AM354_RS12475 PF10415 Fumarase C C-terminus AM354_RS12480 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM354_RS12485 PF03091 CutA1 divalent ion tolerance protein AM354_RS12490 PF02683 Cytochrome C biogenesis protein transmembrane region AM354_RS12490 PF11412 Disulphide bond corrector protein DsbC AM354_RS12510 PF09997 Predicted membrane protein (DUF2238) AM354_RS12520 PF00550 Phosphopantetheine attachment site AM354_RS12520 PF00857 Isochorismatase family AM354_RS12525 PF13193 AMP-binding enzyme C-terminal domain AM354_RS12525 PF00501 AMP-binding enzyme AM354_RS12530 PF00425 chorismate binding enzyme AM354_RS12535 PF05977 Transmembrane secretion effector AM354_RS12540 PF00501 AMP-binding enzyme AM354_RS12540 PF00975 Thioesterase domain AM354_RS12540 PF00550 Phosphopantetheine attachment site AM354_RS12540 PF00668 Condensation domain AM354_RS12550 PF00756 Putative esterase AM354_RS12550 PF11806 Domain of unknown function (DUF3327) AM354_RS12555 PF07715 TonB-dependent Receptor Plug Domain AM354_RS12555 PF00593 TonB dependent receptor AM354_RS12565 PF00668 Condensation domain AM354_RS12565 PF13193 AMP-binding enzyme C-terminal domain AM354_RS12565 PF00550 Phosphopantetheine attachment site AM354_RS12565 PF00501 AMP-binding enzyme AM354_RS12565 PF00975 Thioesterase domain AM354_RS12570 PF07715 TonB-dependent Receptor Plug Domain AM354_RS12575 PF00668 Condensation domain AM354_RS12575 PF00550 Phosphopantetheine attachment site AM354_RS12575 PF00501 AMP-binding enzyme AM354_RS12580 PF00501 AMP-binding enzyme AM354_RS12580 PF00668 Condensation domain AM354_RS12580 PF08242 Methyltransferase domain AM354_RS12580 PF00550 Phosphopantetheine attachment site AM354_RS12585 PF00501 AMP-binding enzyme AM354_RS12585 PF13193 AMP-binding enzyme C-terminal domain AM354_RS12585 PF00668 Condensation domain AM354_RS12585 PF00975 Thioesterase domain AM354_RS12585 PF00550 Phosphopantetheine attachment site AM354_RS12590 PF00375 Sodium:dicarboxylate symporter family AM354_RS12595 PF13193 AMP-binding enzyme C-terminal domain AM354_RS12595 PF16177 Acetyl-coenzyme A synthetase N-terminus AM354_RS12595 PF00501 AMP-binding enzyme AM354_RS12600 PF04341 Protein of unknown function, DUF485 AM354_RS12605 PF00474 Sodium:solute symporter family AM354_RS12635 PF02142 MGS-like domain AM354_RS12635 PF01808 AICARFT/IMPCHase bienzyme AM354_RS12640 PF02843 Phosphoribosylglycinamide synthetase, C domain AM354_RS12640 PF02844 Phosphoribosylglycinamide synthetase, N domain AM354_RS12640 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM354_RS12645 PF07356 Protein of unknown function (DUF1481) AM354_RS12650 PF00216 Bacterial DNA-binding protein AM354_RS12655 PF04222 Protein of unknown function (DUF416) AM354_RS12660 PF04493 Endonuclease V AM354_RS12665 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM354_RS12670 PF00293 NUDIX domain AM354_RS12670 PF09297 NADH pyrophosphatase zinc ribbon domain AM354_RS12675 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AM354_RS12680 PF01964 Radical SAM ThiC family AM354_RS12680 PF13667 ThiC-associated domain AM354_RS12685 PF02581 Thiamine monophosphate synthase AM354_RS12690 PF00899 ThiF family AM354_RS12695 PF02597 ThiS family AM354_RS12700 PF05690 Thiazole biosynthesis protein ThiG AM354_RS12705 PF06968 Biotin and Thiamin Synthesis associated domain AM354_RS12705 PF04055 Radical SAM superfamily AM354_RS12720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS12720 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS12735 PF04998 RNA polymerase Rpb1, domain 5 AM354_RS12735 PF05000 RNA polymerase Rpb1, domain 4 AM354_RS12735 PF04983 RNA polymerase Rpb1, domain 3 AM354_RS12735 PF00623 RNA polymerase Rpb1, domain 2 AM354_RS12735 PF04997 RNA polymerase Rpb1, domain 1 AM354_RS12740 PF10385 RNA polymerase beta subunit external 1 domain AM354_RS12740 PF04560 RNA polymerase Rpb2, domain 7 AM354_RS12740 PF00562 RNA polymerase Rpb2, domain 6 AM354_RS12740 PF04565 RNA polymerase Rpb2, domain 3 AM354_RS12740 PF04563 RNA polymerase beta subunit AM354_RS12740 PF04561 RNA polymerase Rpb2, domain 2 AM354_RS12745 PF16320 Ribosomal protein L7/L12 dimerisation domain AM354_RS12745 PF00542 Ribosomal protein L7/L12 C-terminal domain AM354_RS12750 PF00466 Ribosomal protein L10 AM354_RS12755 PF00687 Ribosomal protein L1p/L10e family AM354_RS12760 PF00298 Ribosomal protein L11, RNA binding domain AM354_RS12760 PF03946 Ribosomal protein L11, N-terminal domain AM354_RS12765 PF02357 Transcription termination factor nusG AM354_RS12765 PF00467 KOW motif AM354_RS12770 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM354_RS12775 PF00009 Elongation factor Tu GTP binding domain AM354_RS12775 PF03143 Elongation factor Tu C-terminal domain AM354_RS12775 PF03144 Elongation factor Tu domain 2 AM354_RS12805 PF13673 Acetyltransferase (GNAT) domain AM354_RS12810 PF00485 Phosphoribulokinase / Uridine kinase family AM354_RS12815 PF02237 Biotin protein ligase C terminal domain AM354_RS12815 PF03099 Biotin/lipoate A/B protein ligase family AM354_RS12815 PF08279 HTH domain AM354_RS12820 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM354_RS12820 PF01565 FAD binding domain AM354_RS12845 PF12724 Flavodoxin domain AM354_RS12850 PF02386 Cation transport protein AM354_RS12855 PF01205 Uncharacterized protein family UPF0029 AM354_RS12855 PF09186 Domain of unknown function (DUF1949) AM354_RS12860 PF00557 Metallopeptidase family M24 AM354_RS12865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM354_RS12865 PF00378 Enoyl-CoA hydratase/isomerase AM354_RS12865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM354_RS12870 PF00108 Thiolase, N-terminal domain AM354_RS12870 PF02803 Thiolase, C-terminal domain AM354_RS12875 PF00175 Oxidoreductase NAD-binding domain AM354_RS12875 PF00970 Oxidoreductase FAD-binding domain AM354_RS12880 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM354_RS12885 PF03575 Peptidase family S51 AM354_RS12890 PF02357 Transcription termination factor nusG AM354_RS12895 PF00490 Delta-aminolevulinic acid dehydratase AM354_RS12900 PF01026 TatD related DNase AM354_RS12905 PF00902 Sec-independent protein translocase protein (TatC) AM354_RS12915 PF02416 mttA/Hcf106 family AM354_RS12920 PF03109 ABC1 family AM354_RS12925 PF02036 SCP-2 sterol transfer family AM354_RS12930 PF01209 ubiE/COQ5 methyltransferase family AM354_RS12935 PF02646 RmuC family AM354_RS12940 PF09335 SNARE associated Golgi protein AM354_RS12950 PF01048 Phosphorylase superfamily AM354_RS12955 PF01738 Dienelactone hydrolase family AM354_RS12960 PF08267 Cobalamin-independent synthase, N-terminal domain AM354_RS12960 PF01717 Cobalamin-independent synthase, Catalytic domain AM354_RS12965 PF03466 LysR substrate binding domain AM354_RS12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS12970 PF00892 EamA-like transporter family AM354_RS12985 PF03009 Glycerophosphoryl diester phosphodiesterase family AM354_RS12990 PF17912 MalK OB fold domain AM354_RS12990 PF00005 ABC transporter AM354_RS12995 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS13000 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS13005 PF13416 Bacterial extracellular solute-binding protein AM354_RS13010 PF00155 Aminotransferase class I and II AM354_RS13015 PF00005 ABC transporter AM354_RS13020 PF00005 ABC transporter AM354_RS13020 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM354_RS13025 PF11862 Domain of unknown function (DUF3382) AM354_RS13025 PF02653 Branched-chain amino acid transport system / permease component AM354_RS13030 PF02653 Branched-chain amino acid transport system / permease component AM354_RS13035 PF13458 Periplasmic binding protein AM354_RS13040 PF12568 Acetyltransferase (GNAT) domain, PanZ AM354_RS13055 PF00140 Sigma-70 factor, region 1.2 AM354_RS13055 PF04542 Sigma-70 region 2 AM354_RS13055 PF04545 Sigma-70, region 4 AM354_RS13060 PF18075 FtsX extracellular domain AM354_RS13060 PF02687 FtsX-like permease family AM354_RS13065 PF00005 ABC transporter AM354_RS13070 PF02881 SRP54-type protein, helical bundle domain AM354_RS13070 PF00448 SRP54-type protein, GTPase domain AM354_RS13070 PF02881 SRP54-type protein, helical bundle domain AM354_RS13070 PF00448 SRP54-type protein, GTPase domain AM354_RS13080 PF06611 Protein of unknown function (DUF1145) AM354_RS13090 PF07947 YhhN family AM354_RS13095 PF02974 Protease inhibitor Inh AM354_RS13100 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM354_RS13100 PF00413 Matrixin AM354_RS13100 PF08548 Peptidase M10 serralysin C terminal AM354_RS13105 PF00403 Heavy-metal-associated domain AM354_RS13120 PF01206 Sulfurtransferase TusA AM354_RS13125 PF02592 Putative vitamin uptake transporter AM354_RS13135 PF08786 DcrB AM354_RS13140 PF02754 Cysteine-rich domain AM354_RS13140 PF13183 4Fe-4S dicluster domain AM354_RS13145 PF00890 FAD binding domain AM354_RS13150 PF01266 FAD dependent oxidoreductase AM354_RS13150 PF04324 BFD-like [2Fe-2S] binding domain AM354_RS13160 PF07690 Major Facilitator Superfamily AM354_RS13165 PF03009 Glycerophosphoryl diester phosphodiesterase family AM354_RS13175 PF12146 Serine aminopeptidase, S33 AM354_RS13180 PF01810 LysE type translocator AM354_RS13185 PF01810 LysE type translocator AM354_RS13190 PF00570 HRDC domain AM354_RS13190 PF00270 DEAD/DEAH box helicase AM354_RS13190 PF16124 RecQ zinc-binding AM354_RS13190 PF00271 Helicase conserved C-terminal domain AM354_RS13190 PF09382 RQC domain AM354_RS13195 PF02253 Phospholipase A1 AM354_RS13200 PF03061 Thioesterase superfamily AM354_RS13205 PF00892 EamA-like transporter family AM354_RS13210 PF01544 CorA-like Mg2+ transporter protein AM354_RS13225 PF00580 UvrD/REP helicase N-terminal domain AM354_RS13225 PF13361 UvrD-like helicase C-terminal domain AM354_RS13230 PF13419 Haloacid dehalogenase-like hydrolase AM354_RS13235 PF00589 Phage integrase family AM354_RS13235 PF02899 Phage integrase, N-terminal SAM-like domain AM354_RS13240 PF04340 Protein of unknown function, DUF484 AM354_RS13245 PF01678 Diaminopimelate epimerase AM354_RS13250 PF13627 Prokaryotic lipoprotein-attachment site AM354_RS13255 PF01491 Frataxin-like domain AM354_RS13260 PF01295 Adenylate cyclase, class-I AM354_RS13260 PF12633 Adenylate cyclase NT domain AM354_RS13265 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM354_RS13265 PF03900 Porphobilinogen deaminase, C-terminal domain AM354_RS13270 PF02602 Uroporphyrinogen-III synthase HemD AM354_RS13275 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AM354_RS13280 PF07719 Tetratricopeptide repeat AM354_RS13280 PF07219 HemY protein N-terminus AM354_RS13305 PF00324 Amino acid permease AM354_RS13310 PF03808 Glycosyl transferase WecB/TagA/CpsF family AM354_RS13315 PF06899 WzyE protein, O-antigen assembly polymerase AM354_RS13320 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AM354_RS13325 PF01943 Polysaccharide biosynthesis protein AM354_RS13330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM354_RS13340 PF00483 Nucleotidyl transferase AM354_RS13345 PF16363 GDP-mannose 4,6 dehydratase AM354_RS13350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM354_RS13350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM354_RS13350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM354_RS13355 PF02350 UDP-N-acetylglucosamine 2-epimerase AM354_RS13360 PF02706 Chain length determinant protein AM354_RS13365 PF00953 Glycosyl transferase family 4 AM354_RS13370 PF07497 Rho termination factor, RNA-binding domain AM354_RS13370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM354_RS13370 PF07498 Rho termination factor, N-terminal domain AM354_RS13375 PF00085 Thioredoxin AM354_RS13380 PF00271 Helicase conserved C-terminal domain AM354_RS13380 PF00270 DEAD/DEAH box helicase AM354_RS13385 PF02541 Ppx/GppA phosphatase family AM354_RS13390 PF00580 UvrD/REP helicase N-terminal domain AM354_RS13390 PF13361 UvrD-like helicase C-terminal domain AM354_RS13400 PF05193 Peptidase M16 inactive domain AM354_RS13400 PF00675 Insulinase (Peptidase family M16) AM354_RS13405 PF00375 Sodium:dicarboxylate symporter family AM354_RS13410 PF00672 HAMP domain AM354_RS13410 PF00563 EAL domain AM354_RS13410 PF17154 Gammaproteobacterial periplasmic sensor domain AM354_RS13410 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS13415 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AM354_RS13420 PF01270 Glycosyl hydrolases family 8 AM354_RS13425 PF03170 Bacterial cellulose synthase subunit AM354_RS13430 PF07238 PilZ domain AM354_RS13430 PF00535 Glycosyl transferase family 2 AM354_RS13435 PF06564 Cellulose biosynthesis protein BcsQ AM354_RS13445 PF10995 Cellulose biosynthesis GIL AM354_RS13450 PF11120 Cellulose biosynthesis protein BcsF AM354_RS13455 PF11658 Cellulose biosynthesis protein BcsG AM354_RS13460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM354_RS13460 PF00005 ABC transporter AM354_RS13465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM354_RS13465 PF00005 ABC transporter AM354_RS13470 PF12911 N-terminal TM domain of oligopeptide transport permease C AM354_RS13470 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS13475 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS13480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS13485 PF08329 Chitinase A, N-terminal domain AM354_RS13485 PF00704 Glycosyl hydrolases family 18 AM354_RS13500 PF07690 Major Facilitator Superfamily AM354_RS13505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS13505 PF05231 MASE1 AM354_RS13505 PF07730 Histidine kinase AM354_RS13510 PF00196 Bacterial regulatory proteins, luxR family AM354_RS13510 PF00072 Response regulator receiver domain AM354_RS13515 PF00884 Sulfatase AM354_RS13515 PF08019 Phosphoethanolamine transferase EptA/EptB AM354_RS13520 PF02566 OsmC-like protein AM354_RS13525 PF01047 MarR family AM354_RS13535 PF04966 Carbohydrate-selective porin, OprB family AM354_RS13540 PF00232 Glycosyl hydrolase family 1 AM354_RS13545 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM354_RS13545 PF00367 phosphotransferase system, EIIB AM354_RS13545 PF02378 Phosphotransferase system, EIIC AM354_RS13555 PF07690 Major Facilitator Superfamily AM354_RS13570 PF07690 Major Facilitator Superfamily AM354_RS13575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS13575 PF03466 LysR substrate binding domain AM354_RS13590 PF07969 Amidohydrolase family AM354_RS13595 PF00857 Isochorismatase family AM354_RS13605 PF01757 Acyltransferase family AM354_RS13610 PF07690 Major Facilitator Superfamily AM354_RS13620 PF03466 LysR substrate binding domain AM354_RS13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS13635 PF00009 Elongation factor Tu GTP binding domain AM354_RS13635 PF03144 Elongation factor Tu domain 2 AM354_RS13635 PF09106 Elongation factor SelB, winged helix AM354_RS13635 PF09107 Elongation factor SelB, winged helix AM354_RS13640 PF12390 Selenocysteine synthase N terminal AM354_RS13640 PF03841 L-seryl-tRNA selenium transferase AM354_RS13645 PF13417 Glutathione S-transferase, N-terminal domain AM354_RS13645 PF00043 Glutathione S-transferase, C-terminal domain AM354_RS13655 PF04216 Protein involved in formate dehydrogenase formation AM354_RS13660 PF01292 Prokaryotic cytochrome b561 AM354_RS13665 PF09163 Formate dehydrogenase N, transmembrane AM354_RS13665 PF13247 4Fe-4S dicluster domain AM354_RS13675 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM354_RS13675 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM354_RS13680 PF00672 HAMP domain AM354_RS13680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM354_RS13680 PF02203 Tar ligand binding domain homologue AM354_RS13685 PF03473 MOSC domain AM354_RS13685 PF03475 3-alpha domain AM354_RS13690 PF08241 Methyltransferase domain AM354_RS13695 PF10928 Protein of unknown function (DUF2810) AM354_RS13700 PF00155 Aminotransferase class I and II AM354_RS13700 PF00392 Bacterial regulatory proteins, gntR family AM354_RS13710 PF05068 Mannitol repressor AM354_RS13715 PF08125 Mannitol dehydrogenase C-terminal domain AM354_RS13715 PF01232 Mannitol dehydrogenase Rossmann domain AM354_RS13720 PF02378 Phosphotransferase system, EIIC AM354_RS13720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM354_RS13720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM354_RS13725 PF11254 Protein of unknown function (DUF3053) AM354_RS13735 PF05746 DALR anticodon binding domain AM354_RS13735 PF02092 Glycyl-tRNA synthetase beta subunit AM354_RS13740 PF02091 Glycyl-tRNA synthetase alpha subunit AM354_RS13745 PF00657 GDSL-like Lipase/Acylhydrolase AM354_RS13745 PF03797 Autotransporter beta-domain AM354_RS13750 PF03352 Methyladenine glycosylase AM354_RS13760 PF00691 OmpA family AM354_RS13760 PF13488 Glycine zipper AM354_RS13765 PF00356 Bacterial regulatory proteins, lacI family AM354_RS13775 PF00294 pfkB family carbohydrate kinase AM354_RS13780 PF07690 Major Facilitator Superfamily AM354_RS13785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM354_RS13785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM354_RS13790 PF00128 Alpha amylase, catalytic domain AM354_RS13795 PF00155 Aminotransferase class I and II AM354_RS13810 PF02080 TrkA-C domain AM354_RS13810 PF06826 Predicted Permease Membrane Region AM354_RS13815 PF00011 Hsp20/alpha crystallin family AM354_RS13820 PF00011 Hsp20/alpha crystallin family AM354_RS13825 PF07119 Protein of unknown function (DUF1375) AM354_RS13830 PF12566 Protein of unknown function (DUF3748) AM354_RS13830 PF07676 WD40-like Beta Propeller Repeat AM354_RS13835 PF01569 PAP2 superfamily AM354_RS13840 PF00291 Pyridoxal-phosphate dependent enzyme AM354_RS13845 PF02423 Ornithine cyclodeaminase/mu-crystallin family AM354_RS13855 PF01751 Toprim domain AM354_RS13855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS13855 PF18053 DNA gyrase B subunit insert domain AM354_RS13855 PF00986 DNA gyrase B subunit, carboxyl terminus AM354_RS13855 PF00204 DNA gyrase B AM354_RS13860 PF02463 RecF/RecN/SMC N terminal domain AM354_RS13865 PF02768 DNA polymerase III beta subunit, C-terminal domain AM354_RS13865 PF02767 DNA polymerase III beta subunit, central domain AM354_RS13865 PF00712 DNA polymerase III beta subunit, N-terminal domain AM354_RS13870 PF11638 DnaA N-terminal domain AM354_RS13870 PF00308 Bacterial dnaA protein AM354_RS13870 PF08299 Bacterial dnaA protein helix-turn-helix AM354_RS13875 PF00468 Ribosomal protein L34 AM354_RS13880 PF00825 Ribonuclease P AM354_RS13885 PF01809 Putative membrane protein insertion efficiency factor AM354_RS13890 PF14849 YidC periplasmic domain AM354_RS13890 PF02096 60Kd inner membrane protein AM354_RS13895 PF12631 MnmE helical domain AM354_RS13895 PF10396 GTP-binding protein TrmE N-terminus AM354_RS13895 PF01926 50S ribosome-binding GTPase AM354_RS13900 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM354_RS13905 PF01648 4'-phosphopantetheinyl transferase superfamily AM354_RS13910 PF03358 NADPH-dependent FMN reductase AM354_RS13920 PF00860 Permease family AM354_RS13925 PF00293 NUDIX domain AM354_RS13930 PF13419 Haloacid dehalogenase-like hydrolase AM354_RS13935 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS13940 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS13945 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS13950 PF01895 PhoU domain AM354_RS13955 PF00005 ABC transporter AM354_RS13960 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS13965 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS13970 PF12849 PBP superfamily domain AM354_RS13975 PF01380 SIS domain AM354_RS13980 PF12804 MobA-like NTP transferase domain AM354_RS13980 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS13985 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM354_RS13985 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM354_RS13990 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM354_RS13990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM354_RS13995 PF00231 ATP synthase AM354_RS14000 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM354_RS14000 PF00306 ATP synthase alpha/beta chain, C terminal domain AM354_RS14000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM354_RS14005 PF00213 ATP synthase delta (OSCP) subunit AM354_RS14010 PF00430 ATP synthase B/B' CF(0) AM354_RS14015 PF00137 ATP synthase subunit C AM354_RS14020 PF00119 ATP synthase A chain AM354_RS14025 PF03899 ATP synthase I chain AM354_RS14030 PF02527 rRNA small subunit methyltransferase G AM354_RS14035 PF13932 GidA associated domain AM354_RS14035 PF01134 Glucose inhibited division protein A AM354_RS14040 PF00258 Flavodoxin AM354_RS14045 PF01037 Lrp/AsnC ligand binding domain AM354_RS14050 PF03590 Aspartate-ammonia ligase AM354_RS14055 PF05762 VWA domain containing CoxE-like protein AM354_RS14060 PF12592 Protein of unknown function (DUF3763) AM354_RS14060 PF17868 AAA lid domain AM354_RS14060 PF07728 AAA domain (dynein-related subfamily) AM354_RS14065 PF02705 K+ potassium transporter AM354_RS14070 PF05025 RbsD / FucU transport protein family AM354_RS14075 PF00005 ABC transporter AM354_RS14080 PF02653 Branched-chain amino acid transport system / permease component AM354_RS14085 PF13407 Periplasmic binding protein domain AM354_RS14090 PF00294 pfkB family carbohydrate kinase AM354_RS14095 PF00356 Bacterial regulatory proteins, lacI family AM354_RS14100 PF07690 Major Facilitator Superfamily AM354_RS14105 PF00392 Bacterial regulatory proteins, gntR family AM354_RS14105 PF07729 FCD domain AM354_RS14130 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AM354_RS14135 PF12804 MobA-like NTP transferase domain AM354_RS14140 PF06288 Protein of unknown function (DUF1040) AM354_RS14145 PF01636 Phosphotransferase enzyme family AM354_RS14150 PF01323 DSBA-like thioredoxin domain AM354_RS14155 PF01553 Acyltransferase AM354_RS14160 PF01612 3'-5' exonuclease AM354_RS14160 PF01367 5'-3' exonuclease, C-terminal SAM fold AM354_RS14160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM354_RS14160 PF00476 DNA polymerase family A AM354_RS14165 PF01926 50S ribosome-binding GTPase AM354_RS14175 PF04220 Der GTPase activator (YihI) AM354_RS14185 PF06969 HemN C-terminal domain AM354_RS14185 PF04055 Radical SAM superfamily AM354_RS14190 PF00072 Response regulator receiver domain AM354_RS14190 PF02954 Bacterial regulatory protein, Fis family AM354_RS14190 PF00158 Sigma-54 interaction domain AM354_RS14195 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS14195 PF00989 PAS fold AM354_RS14195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS14200 PF00120 Glutamine synthetase, catalytic domain AM354_RS14200 PF03951 Glutamine synthetase, beta-Grasp domain AM354_RS14205 PF00009 Elongation factor Tu GTP binding domain AM354_RS14205 PF00679 Elongation factor G C-terminus AM354_RS14205 PF03144 Elongation factor Tu domain 2 AM354_RS14210 PF13419 Haloacid dehalogenase-like hydrolase AM354_RS14215 PF03631 Virulence factor BrkB AM354_RS14220 PF02580 D-Tyr-tRNA(Tyr) deacylase AM354_RS14225 PF00583 Acetyltransferase (GNAT) family AM354_RS14225 PF09500 Putative thioesterase (yiiD_Cterm) AM354_RS14230 PF05170 AsmA family AM354_RS14235 PF00860 Permease family AM354_RS14240 PF03616 Sodium/glutamate symporter AM354_RS14245 PF17191 RecG wedge domain AM354_RS14245 PF00271 Helicase conserved C-terminal domain AM354_RS14245 PF00270 DEAD/DEAH box helicase AM354_RS14250 PF00588 SpoU rRNA Methylase family AM354_RS14250 PF12105 SpoU, rRNA methylase, C-terminal AM354_RS14255 PF02824 TGS domain AM354_RS14255 PF04607 Region found in RelA / SpoT proteins AM354_RS14255 PF13291 ACT domain AM354_RS14260 PF01192 RNA polymerase Rpb6 AM354_RS14265 PF00625 Guanylate kinase AM354_RS14270 PF03458 UPF0126 domain AM354_RS14280 PF01773 Na+ dependent nucleoside transporter N-terminus AM354_RS14280 PF07662 Na+ dependent nucleoside transporter C-terminus AM354_RS14280 PF07670 Nucleoside recognition AM354_RS14290 PF08340 Domain of unknown function (DUF1732) AM354_RS14290 PF03755 YicC-like family, N-terminal region AM354_RS14295 PF01138 3' exoribonuclease family, domain 1 AM354_RS14295 PF03725 3' exoribonuclease family, domain 2 AM354_RS14300 PF00156 Phosphoribosyl transferase domain AM354_RS14305 PF00440 Bacterial regulatory proteins, tetR family AM354_RS14310 PF00692 dUTPase AM354_RS14315 PF04127 DNA / pantothenate metabolism flavoprotein AM354_RS14315 PF02441 Flavoprotein AM354_RS14320 PF04002 RadC-like JAB domain AM354_RS14325 PF00830 Ribosomal L28 family AM354_RS14330 PF00471 Ribosomal protein L33 AM354_RS14335 PF06827 Zinc finger found in FPG and IleRS AM354_RS14335 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM354_RS14335 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM354_RS14340 PF01467 Cytidylyltransferase-like AM354_RS14345 PF00535 Glycosyl transferase family 2 AM354_RS14350 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM354_RS14360 PF00534 Glycosyl transferases group 1 AM354_RS14360 PF13439 Glycosyltransferase Family 4 AM354_RS14365 PF13439 Glycosyltransferase Family 4 AM354_RS14365 PF00534 Glycosyl transferases group 1 AM354_RS14370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM354_RS14385 PF00535 Glycosyl transferase family 2 AM354_RS14385 PF01501 Glycosyl transferase family 8 AM354_RS14390 PF04932 O-Antigen ligase AM354_RS14395 PF00534 Glycosyl transferases group 1 AM354_RS14395 PF09318 Glycosyl transferase 1 domain A AM354_RS14400 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM354_RS14405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM354_RS14410 PF01370 NAD dependent epimerase/dehydratase family AM354_RS14415 PF00155 Aminotransferase class I and II AM354_RS14420 PF00107 Zinc-binding dehydrogenase AM354_RS14420 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS14425 PF04748 Divergent polysaccharide deacetylase AM354_RS14430 PF01551 Peptidase family M23 AM354_RS14435 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM354_RS14435 PF01676 Metalloenzyme superfamily AM354_RS14440 PF00581 Rhodanese-like domain AM354_RS14445 PF00462 Glutaredoxin AM354_RS14450 PF02556 Preprotein translocase subunit SecB AM354_RS14455 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM354_RS14455 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM354_RS14460 PF06426 Serine acetyltransferase, N-terminal AM354_RS14460 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS14465 PF11769 Protein of unknown function (DUF3313) AM354_RS14475 PF00588 SpoU rRNA Methylase family AM354_RS14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS14480 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS14480 PF16527 Two-component sensor protein CpxA, periplasmic domain AM354_RS14480 PF00672 HAMP domain AM354_RS14485 PF00072 Response regulator receiver domain AM354_RS14485 PF00486 Transcriptional regulatory protein, C terminal AM354_RS14490 PF07813 LTXXQ motif family protein AM354_RS14495 PF16916 Dimerisation domain of Zinc Transporter AM354_RS14495 PF01545 Cation efflux family AM354_RS14500 PF00365 Phosphofructokinase AM354_RS14510 PF00121 Triosephosphate isomerase AM354_RS14515 PF07305 Protein of unknown function (DUF1454) AM354_RS14520 PF05656 Protein of unknown function (DUF805) AM354_RS14525 PF00970 Oxidoreductase FAD-binding domain AM354_RS14525 PF00175 Oxidoreductase NAD-binding domain AM354_RS14535 PF07690 Major Facilitator Superfamily AM354_RS14540 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM354_RS14545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM354_RS14545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM354_RS14550 PF00230 Major intrinsic protein AM354_RS14555 PF06005 Cell division protein ZapB AM354_RS14560 PF03737 Aldolase/RraA AM354_RS14565 PF01040 UbiA prenyltransferase family AM354_RS14570 PF10431 C-terminal, D2-small domain, of ClpB protein AM354_RS14570 PF00004 ATPase family associated with various cellular activities (AAA) AM354_RS14570 PF07724 AAA domain (Cdc48 subfamily) AM354_RS14575 PF00227 Proteasome subunit AM354_RS14580 PF05036 Sporulation related domain AM354_RS14585 PF00356 Bacterial regulatory proteins, lacI family AM354_RS14590 PF17764 3′ DNA-binding domain (3′BD) AM354_RS14590 PF00271 Helicase conserved C-terminal domain AM354_RS14590 PF00270 DEAD/DEAH box helicase AM354_RS14590 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM354_RS14590 PF18074 Primosomal protein N C-terminal domain AM354_RS14595 PF01197 Ribosomal protein L31 AM354_RS14600 PF01340 Met Apo-repressor, MetJ AM354_RS14605 PF01053 Cys/Met metabolism PLP-dependent enzyme AM354_RS14610 PF00742 Homoserine dehydrogenase AM354_RS14610 PF03447 Homoserine dehydrogenase, NAD binding domain AM354_RS14610 PF00696 Amino acid kinase family AM354_RS14615 PF02219 Methylenetetrahydrofolate reductase AM354_RS14620 PF00311 Phosphoenolpyruvate carboxylase AM354_RS14625 PF07687 Peptidase dimerisation domain AM354_RS14625 PF01546 Peptidase family M20/M25/M40 AM354_RS14630 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM354_RS14630 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM354_RS14635 PF00696 Amino acid kinase family AM354_RS14640 PF00764 Arginosuccinate synthase AM354_RS14645 PF14698 Argininosuccinate lyase C-terminal AM354_RS14645 PF00206 Lyase AM354_RS14655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM354_RS14655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS14660 PF00462 Glutaredoxin AM354_RS14660 PF08534 Redoxin AM354_RS14665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS14665 PF03466 LysR substrate binding domain AM354_RS14670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM354_RS14670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS14675 PF00440 Bacterial regulatory proteins, tetR family AM354_RS14680 PF07226 Protein of unknown function (DUF1422) AM354_RS14685 PF05958 tRNA (Uracil-5-)-methyltransferase AM354_RS14690 PF07715 TonB-dependent Receptor Plug Domain AM354_RS14690 PF00593 TonB dependent receptor AM354_RS14695 PF01177 Asp/Glu/Hydantoin racemase AM354_RS14735 PF03466 LysR substrate binding domain AM354_RS14735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS14740 PF04219 Protein of unknown function, DUF AM354_RS14745 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM354_RS14745 PF01078 Magnesium chelatase, subunit ChlI AM354_RS14750 PF07690 Major Facilitator Superfamily AM354_RS14755 PF08046 IlvGEDA operon leader peptide AM354_RS14760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS14760 PF00205 Thiamine pyrophosphate enzyme, central domain AM354_RS14760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS14770 PF01063 Amino-transferase class IV AM354_RS14775 PF00920 Dehydratase family AM354_RS14780 PF00585 C-terminal regulatory domain of Threonine dehydratase AM354_RS14780 PF00291 Pyridoxal-phosphate dependent enzyme AM354_RS14800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS14800 PF03466 LysR substrate binding domain AM354_RS14805 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM354_RS14805 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM354_RS14810 PF00294 pfkB family carbohydrate kinase AM354_RS14815 PF00563 EAL domain AM354_RS14820 PF05170 AsmA family AM354_RS14825 PF02611 CDP-diacylglycerol pyrophosphatase AM354_RS14830 PF00083 Sugar (and other) transporter AM354_RS14830 PF07690 Major Facilitator Superfamily AM354_RS14835 PF03631 Virulence factor BrkB AM354_RS14840 PF00378 Enoyl-CoA hydratase/isomerase AM354_RS14845 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS14845 PF13426 PAS domain AM354_RS14845 PF00563 EAL domain AM354_RS14850 PF07813 LTXXQ motif family protein AM354_RS14865 PF03797 Autotransporter beta-domain AM354_RS14865 PF12951 Passenger-associated-transport-repeat AM354_RS14865 PF00082 Subtilase family AM354_RS14870 PF12951 Passenger-associated-transport-repeat AM354_RS14870 PF03797 Autotransporter beta-domain AM354_RS14870 PF00082 Subtilase family AM354_RS14880 PF09308 LuxQ, periplasmic AM354_RS14880 PF00072 Response regulator receiver domain AM354_RS14880 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS14890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM354_RS14890 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS14895 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM354_RS14905 PF01432 Peptidase family M3 AM354_RS14910 PF04445 Putative SAM-dependent methyltransferase AM354_RS14915 PF01380 SIS domain AM354_RS14915 PF00571 CBS domain AM354_RS14925 PF02653 Branched-chain amino acid transport system / permease component AM354_RS14930 PF02653 Branched-chain amino acid transport system / permease component AM354_RS14935 PF00005 ABC transporter AM354_RS14945 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM354_RS14945 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM354_RS14950 PF00582 Universal stress protein family AM354_RS14955 PF03466 LysR substrate binding domain AM354_RS14955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS14965 PF10625 Universal stress protein B (UspB) AM354_RS14970 PF01384 Phosphate transporter family AM354_RS14980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM354_RS15025 PF04865 Baseplate J-like protein AM354_RS15035 PF06890 Bacteriophage Mu Gp45 protein AM354_RS15055 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 AM354_RS15065 PF04984 Phage tail sheath protein subtilisin-like domain AM354_RS15065 PF17482 Phage tail sheath C-terminal domain AM354_RS15095 PF10124 Mu-like prophage major head subunit gpT AM354_RS15115 PF03237 Terminase-like family AM354_RS15120 PF11985 Protein of unknown function (DUF3486) AM354_RS15205 PF13401 AAA domain AM354_RS15205 PF09077 Mu B transposition protein, C terminal AM354_RS15210 PF09299 Mu transposase, C-terminal AM354_RS15210 PF02316 Mu DNA-binding domain AM354_RS15210 PF02914 Bacteriophage Mu transposase AM354_RS15210 PF09039 Mu DNA binding, I gamma subdomain AM354_RS15215 PF13693 Winged helix-turn-helix DNA-binding AM354_RS15230 PF00892 EamA-like transporter family AM354_RS15235 PF00392 Bacterial regulatory proteins, gntR family AM354_RS15235 PF00155 Aminotransferase class I and II AM354_RS15240 PF13193 AMP-binding enzyme C-terminal domain AM354_RS15240 PF00668 Condensation domain AM354_RS15240 PF00550 Phosphopantetheine attachment site AM354_RS15240 PF00975 Thioesterase domain AM354_RS15240 PF00501 AMP-binding enzyme AM354_RS15245 PF00550 Phosphopantetheine attachment site AM354_RS15245 PF00501 AMP-binding enzyme AM354_RS15245 PF00668 Condensation domain AM354_RS15245 PF13193 AMP-binding enzyme C-terminal domain AM354_RS15250 PF16197 Ketoacyl-synthetase C-terminal extension AM354_RS15250 PF00668 Condensation domain AM354_RS15250 PF00109 Beta-ketoacyl synthase, N-terminal domain AM354_RS15250 PF00698 Acyl transferase domain AM354_RS15250 PF00550 Phosphopantetheine attachment site AM354_RS15250 PF02801 Beta-ketoacyl synthase, C-terminal domain AM354_RS15255 PF00668 Condensation domain AM354_RS15255 PF00501 AMP-binding enzyme AM354_RS15255 PF00550 Phosphopantetheine attachment site AM354_RS15255 PF00975 Thioesterase domain AM354_RS15255 PF13193 AMP-binding enzyme C-terminal domain AM354_RS15260 PF07690 Major Facilitator Superfamily AM354_RS15270 PF16884 N-terminal domain of oxidoreductase AM354_RS15270 PF00107 Zinc-binding dehydrogenase AM354_RS15275 PF13533 Biotin-lipoyl like AM354_RS15280 PF00196 Bacterial regulatory proteins, luxR family AM354_RS15295 PF00419 Fimbrial protein AM354_RS15300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM354_RS15300 PF02753 Pili assembly chaperone PapD, C-terminal domain AM354_RS15305 PF00577 Outer membrane usher protein AM354_RS15305 PF13954 PapC N-terminal domain AM354_RS15305 PF13953 PapC C-terminal domain AM354_RS15315 PF00419 Fimbrial protein AM354_RS15325 PF00005 ABC transporter AM354_RS15330 PF03649 Uncharacterised protein family (UPF0014) AM354_RS15340 PF00083 Sugar (and other) transporter AM354_RS15345 PF00171 Aldehyde dehydrogenase family AM354_RS15350 PF04962 KduI/IolB family AM354_RS15360 PF00294 pfkB family carbohydrate kinase AM354_RS15365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS15365 PF00205 Thiamine pyrophosphate enzyme, central domain AM354_RS15365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS15370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM354_RS15370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM354_RS15375 PF01261 Xylose isomerase-like TIM barrel AM354_RS15380 PF01261 Xylose isomerase-like TIM barrel AM354_RS15385 PF03576 Peptidase family S58 AM354_RS15390 PF00583 Acetyltransferase (GNAT) family AM354_RS15395 PF02678 Pirin AM354_RS15395 PF17954 Quercetinase C-terminal cupin domain AM354_RS15405 PF01569 PAP2 superfamily AM354_RS15410 PF10797 Protein of unknown function AM354_RS15415 PF10941 Protein of unknown function DUF2620 AM354_RS15420 PF02126 Phosphotriesterase family AM354_RS15425 PF01676 Metalloenzyme superfamily AM354_RS15430 PF01168 Alanine racemase, N-terminal domain AM354_RS15440 PF14502 Helix-turn-helix domain AM354_RS15440 PF14503 YhfZ C-terminal domain AM354_RS15445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM354_RS15445 PF00356 Bacterial regulatory proteins, lacI family AM354_RS15450 PF02447 GntP family permease AM354_RS15455 PF01202 Shikimate kinase AM354_RS15460 PF01914 MarC family integral membrane protein AM354_RS15465 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM354_RS15465 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM354_RS15470 PF02806 Alpha amylase, C-terminal all-beta domain AM354_RS15470 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM354_RS15470 PF00128 Alpha amylase, catalytic domain AM354_RS15475 PF00128 Alpha amylase, catalytic domain AM354_RS15475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM354_RS15475 PF18390 Glycogen debranching enzyme C-terminal domain AM354_RS15480 PF00483 Nucleotidyl transferase AM354_RS15485 PF08323 Starch synthase catalytic domain AM354_RS15485 PF00534 Glycosyl transferases group 1 AM354_RS15490 PF00343 Carbohydrate phosphorylase AM354_RS15495 PF01266 FAD dependent oxidoreductase AM354_RS15495 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM354_RS15500 PF08220 DeoR-like helix-turn-helix domain AM354_RS15500 PF00455 DeoR C terminal sensor domain AM354_RS15505 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AM354_RS15505 PF01694 Rhomboid family AM354_RS15510 PF00581 Rhodanese-like domain AM354_RS15515 PF08220 DeoR-like helix-turn-helix domain AM354_RS15515 PF00455 DeoR C terminal sensor domain AM354_RS15525 PF03611 PTS system sugar-specific permease component AM354_RS15530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM354_RS15535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM354_RS15540 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM354_RS15545 PF01261 Xylose isomerase-like TIM barrel AM354_RS15550 PF00596 Class II Aldolase and Adducin N-terminal domain AM354_RS15555 PF00196 Bacterial regulatory proteins, luxR family AM354_RS15555 PF17874 MalT-like TPR region AM354_RS15560 PF00343 Carbohydrate phosphorylase AM354_RS15565 PF02446 4-alpha-glucanotransferase AM354_RS15570 PF01521 Iron-sulphur cluster biosynthesis AM354_RS15570 PF01106 NifU-like domain AM354_RS15575 PF00156 Phosphoribosyl transferase domain AM354_RS15580 PF00561 alpha/beta hydrolase fold AM354_RS15590 PF09012 FeoC like transcriptional regulator AM354_RS15595 PF02421 Ferrous iron transport protein B AM354_RS15595 PF17910 FeoB cytosolic helical domain AM354_RS15595 PF07664 Ferrous iron transport protein B C terminus AM354_RS15595 PF07670 Nucleoside recognition AM354_RS15600 PF04023 FeoA domain AM354_RS15605 PF16921 Tex protein YqgF-like domain AM354_RS15605 PF09371 Tex-like protein N-terminal domain AM354_RS15605 PF00575 S1 RNA binding domain AM354_RS15605 PF17674 HHH domain AM354_RS15610 PF01272 Transcription elongation factor, GreA/GreB, C-term AM354_RS15610 PF03449 Transcription elongation factor, N-terminal AM354_RS15615 PF00226 DnaJ domain AM354_RS15615 PF01556 DnaJ C terminal domain AM354_RS15625 PF00072 Response regulator receiver domain AM354_RS15625 PF00486 Transcriptional regulatory protein, C terminal AM354_RS15630 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS15630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS15630 PF00672 HAMP domain AM354_RS15635 PF01850 PIN domain AM354_RS15645 PF01293 Phosphoenolpyruvate carboxykinase AM354_RS15650 PF01430 Hsp33 protein AM354_RS15655 PF01479 S4 domain AM354_RS15660 PF13419 Haloacid dehalogenase-like hydrolase AM354_RS15665 PF07095 Intracellular growth attenuator protein IgaA AM354_RS15670 PF00293 NUDIX domain AM354_RS15675 PF00905 Penicillin binding protein transpeptidase domain AM354_RS15675 PF17092 Penicillin-binding protein OB-like domain AM354_RS15675 PF00912 Transglycosylase AM354_RS15700 PF00263 Bacterial type II and III secretion system protein AM354_RS15700 PF03958 Bacterial type II/III secretion system short domain AM354_RS15705 PF01202 Shikimate kinase AM354_RS15710 PF01761 3-dehydroquinate synthase AM354_RS15715 PF05036 Sporulation related domain AM354_RS15720 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM354_RS15725 PF00834 Ribulose-phosphate 3 epimerase family AM354_RS15730 PF13419 Haloacid dehalogenase-like hydrolase AM354_RS15735 PF00579 tRNA synthetases class I (W and Y) AM354_RS15740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM354_RS15740 PF14824 Sirohaem biosynthesis protein central AM354_RS15740 PF10414 Sirohaem synthase dimerisation region AM354_RS15745 PF01226 Formate/nitrite transporter AM354_RS15750 PF13806 Rieske-like [2Fe-2S] domain AM354_RS15755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS15755 PF04324 BFD-like [2Fe-2S] binding domain AM354_RS15755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM354_RS15755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM354_RS15755 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM354_RS15760 PF07969 Amidohydrolase family AM354_RS15775 PF07690 Major Facilitator Superfamily AM354_RS15780 PF00356 Bacterial regulatory proteins, lacI family AM354_RS15785 PF02056 Family 4 glycosyl hydrolase AM354_RS15785 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM354_RS15790 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM354_RS15800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM354_RS15805 PF06580 Histidine kinase AM354_RS15805 PF07694 5TMR of 5TMR-LYT AM354_RS15810 PF00072 Response regulator receiver domain AM354_RS15810 PF04397 LytTr DNA-binding domain AM354_RS15825 PF05872 Bacterial protein of unknown function (DUF853) AM354_RS15830 PF00117 Glutamine amidotransferase class-I AM354_RS15835 PF00202 Aminotransferase class-III AM354_RS15840 PF12805 FUSC-like inner membrane protein yccS AM354_RS15845 PF13545 Crp-like helix-turn-helix domain AM354_RS15845 PF00027 Cyclic nucleotide-binding domain AM354_RS15850 PF02566 OsmC-like protein AM354_RS15855 PF00485 Phosphoribulokinase / Uridine kinase family AM354_RS15860 PF06794 Uncharacterised protein family (UPF0270) AM354_RS15865 PF00561 alpha/beta hydrolase fold AM354_RS15875 PF02567 Phenazine biosynthesis-like protein AM354_RS15880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM354_RS15885 PF00005 ABC transporter AM354_RS15890 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS15895 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM354_RS15900 PF12848 ABC transporter AM354_RS15900 PF00005 ABC transporter AM354_RS15905 PF02525 Flavodoxin-like fold AM354_RS15910 PF00999 Sodium/hydrogen exchanger family AM354_RS15910 PF02254 TrkA-N domain AM354_RS15915 PF09526 Probable metal-binding protein (DUF2387) AM354_RS15920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM354_RS15925 PF00356 Bacterial regulatory proteins, lacI family AM354_RS15930 PF03553 Na+/H+ antiporter family AM354_RS15935 PF00155 Aminotransferase class I and II AM354_RS15940 PF04102 SlyX AM354_RS15945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM354_RS15945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM354_RS15950 PF08348 YheO-like PAS domain AM354_RS15950 PF13309 HTH domain AM354_RS15955 PF02635 DsrE/DsrF-like family AM354_RS15960 PF02635 DsrE/DsrF-like family AM354_RS15965 PF04077 DsrH like protein AM354_RS15970 PF00164 Ribosomal protein S12/S23 AM354_RS15975 PF00177 Ribosomal protein S7p/S5e AM354_RS15980 PF03144 Elongation factor Tu domain 2 AM354_RS15980 PF00009 Elongation factor Tu GTP binding domain AM354_RS15980 PF03764 Elongation factor G, domain IV AM354_RS15980 PF14492 Elongation Factor G, domain II AM354_RS15980 PF00679 Elongation factor G C-terminus AM354_RS15985 PF00009 Elongation factor Tu GTP binding domain AM354_RS15985 PF03144 Elongation factor Tu domain 2 AM354_RS15985 PF03143 Elongation factor Tu C-terminal domain AM354_RS15990 PF04324 BFD-like [2Fe-2S] binding domain AM354_RS15995 PF00210 Ferritin-like domain AM354_RS16000 PF00338 Ribosomal protein S10p/S20e AM354_RS16005 PF00297 Ribosomal protein L3 AM354_RS16010 PF00573 Ribosomal protein L4/L1 family AM354_RS16015 PF00276 Ribosomal protein L23 AM354_RS16020 PF00181 Ribosomal Proteins L2, RNA binding domain AM354_RS16020 PF03947 Ribosomal Proteins L2, C-terminal domain AM354_RS16025 PF00203 Ribosomal protein S19 AM354_RS16030 PF00237 Ribosomal protein L22p/L17e AM354_RS16035 PF07650 KH domain AM354_RS16035 PF00189 Ribosomal protein S3, C-terminal domain AM354_RS16040 PF00252 Ribosomal protein L16p/L10e AM354_RS16045 PF00831 Ribosomal L29 protein AM354_RS16050 PF00366 Ribosomal protein S17 AM354_RS16055 PF00238 Ribosomal protein L14p/L23e AM354_RS16060 PF00467 KOW motif AM354_RS16060 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM354_RS16065 PF00281 Ribosomal protein L5 AM354_RS16065 PF00673 ribosomal L5P family C-terminus AM354_RS16070 PF00253 Ribosomal protein S14p/S29e AM354_RS16075 PF00410 Ribosomal protein S8 AM354_RS16080 PF00347 Ribosomal protein L6 AM354_RS16085 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM354_RS16090 PF03719 Ribosomal protein S5, C-terminal domain AM354_RS16090 PF00333 Ribosomal protein S5, N-terminal domain AM354_RS16095 PF00327 Ribosomal protein L30p/L7e AM354_RS16100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM354_RS16105 PF00344 SecY translocase AM354_RS16110 PF00444 Ribosomal protein L36 AM354_RS16115 PF00416 Ribosomal protein S13/S18 AM354_RS16120 PF00411 Ribosomal protein S11 AM354_RS16125 PF00163 Ribosomal protein S4/S9 N-terminal domain AM354_RS16125 PF01479 S4 domain AM354_RS16130 PF01000 RNA polymerase Rpb3/RpoA insert domain AM354_RS16130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM354_RS16130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM354_RS16135 PF01196 Ribosomal protein L17 AM354_RS16140 PF09350 Domain of unknown function (DUF1992) AM354_RS16145 PF13411 MerR HTH family regulatory protein AM354_RS16150 PF03889 Alternative ribosome-rescue factor A AM354_RS16155 PF01741 Large-conductance mechanosensitive channel, MscL AM354_RS16160 PF02080 TrkA-C domain AM354_RS16160 PF02254 TrkA-N domain AM354_RS16165 PF01189 16S rRNA methyltransferase RsmB/F AM354_RS16165 PF01029 NusB family AM354_RS16170 PF00551 Formyl transferase AM354_RS16170 PF02911 Formyl transferase, C-terminal domain AM354_RS16175 PF01327 Polypeptide deformylase AM354_RS16180 PF17782 DprA winged helix domain AM354_RS16180 PF02481 DNA recombination-mediator protein A AM354_RS16185 PF04361 Protein of unknown function (DUF494) AM354_RS16190 PF01396 Topoisomerase DNA binding C4 zinc finger AM354_RS16195 PF01300 Telomere recombination AM354_RS16200 PF01488 Shikimate / quinate 5-dehydrogenase AM354_RS16200 PF08501 Shikimate dehydrogenase substrate binding domain AM354_RS16200 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM354_RS16205 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS16240 PF04204 Homoserine O-succinyltransferase AM354_RS16245 PF01274 Malate synthase AM354_RS16250 PF00463 Isocitrate lyase family AM354_RS16255 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM354_RS16260 PF01081 KDPG and KHG aldolase AM354_RS16265 PF00920 Dehydratase family AM354_RS16270 PF02447 GntP family permease AM354_RS16275 PF01202 Shikimate kinase AM354_RS16280 PF09339 IclR helix-turn-helix domain AM354_RS16280 PF01614 Bacterial transcriptional regulator AM354_RS16285 PF02607 B12 binding domain AM354_RS16285 PF02574 Homocysteine S-methyltransferase AM354_RS16285 PF00809 Pterin binding enzyme AM354_RS16285 PF02310 B12 binding domain AM354_RS16285 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM354_RS16290 PF00665 Integrase core domain AM354_RS16290 PF13333 Integrase core domain AM354_RS16305 PF13333 Integrase core domain AM354_RS16305 PF00665 Integrase core domain AM354_RS16305 PF13276 HTH-like domain AM354_RS16315 PF07702 UTRA domain AM354_RS16315 PF00392 Bacterial regulatory proteins, gntR family AM354_RS16330 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS16340 PF08402 TOBE domain AM354_RS16340 PF00005 ABC transporter AM354_RS16345 PF02690 Na+/Pi-cotransporter AM354_RS16350 PF05860 haemagglutination activity domain AM354_RS16350 PF13332 Hemagglutinin repeat AM354_RS16355 PF08479 POTRA domain, ShlB-type AM354_RS16355 PF17287 POTRA domain AM354_RS16355 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM354_RS16360 PF01758 Sodium Bile acid symporter family AM354_RS16365 PF01842 ACT domain AM354_RS16365 PF00696 Amino acid kinase family AM354_RS16375 PF00342 Phosphoglucose isomerase AM354_RS16380 PF14052 Capsule assembly protein Wzi AM354_RS16385 PF06146 Phosphate-starvation-inducible E AM354_RS16390 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS16395 PF14785 Maltose transport system permease protein MalF P2 domain AM354_RS16395 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS16400 PF01547 Bacterial extracellular solute-binding protein AM354_RS16405 PF00128 Alpha amylase, catalytic domain AM354_RS16405 PF16657 Maltogenic Amylase, C-terminal domain AM354_RS16410 PF17912 MalK OB fold domain AM354_RS16410 PF00005 ABC transporter AM354_RS16415 PF02264 LamB porin AM354_RS16420 PF07148 Maltose operon periplasmic protein precursor (MalM) AM354_RS16430 PF00356 Bacterial regulatory proteins, lacI family AM354_RS16435 PF07690 Major Facilitator Superfamily AM354_RS16435 PF00083 Sugar (and other) transporter AM354_RS16440 PF04345 Chorismate lyase AM354_RS16445 PF01040 UbiA prenyltransferase family AM354_RS16450 PF01553 Acyltransferase AM354_RS16455 PF01219 Prokaryotic diacylglycerol kinase AM354_RS16460 PF00717 Peptidase S24-like AM354_RS16460 PF01726 LexA DNA binding domain AM354_RS16465 PF01554 MatE AM354_RS16470 PF05532 CsbD-like AM354_RS16475 PF01475 Ferric uptake regulator family AM354_RS16485 PF01207 Dihydrouridine synthase (Dus) AM354_RS16490 PF09583 Phage shock protein G (Phageshock_PspG) AM354_RS16495 PF00107 Zinc-binding dehydrogenase AM354_RS16495 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS16500 PF00772 DnaB-like helicase N terminal domain AM354_RS16500 PF03796 DnaB-like helicase C terminal domain AM354_RS16505 PF00842 Alanine racemase, C-terminal domain AM354_RS16505 PF01168 Alanine racemase, N-terminal domain AM354_RS16510 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS16515 PF01037 Lrp/AsnC ligand binding domain AM354_RS16520 PF00155 Aminotransferase class I and II AM354_RS16525 PF01894 Uncharacterised protein family UPF0047 AM354_RS16530 PF04237 YjbR AM354_RS16535 PF14602 Hexapeptide repeat of succinyl-transferase AM354_RS16535 PF12464 Maltose acetyltransferase AM354_RS16540 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS16540 PF00107 Zinc-binding dehydrogenase AM354_RS16545 PF00005 ABC transporter AM354_RS16545 PF17755 UvrA DNA-binding domain AM354_RS16545 PF17760 UvrA interaction domain AM354_RS16555 PF00436 Single-strand binding protein family AM354_RS16575 PF14497 Glutathione S-transferase, C-terminal domain AM354_RS16575 PF02798 Glutathione S-transferase, N-terminal domain AM354_RS16585 PF00860 Permease family AM354_RS16590 PF00999 Sodium/hydrogen exchanger family AM354_RS16595 PF03466 LysR substrate binding domain AM354_RS16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS16600 PF03788 LrgA family AM354_RS16610 PF13193 AMP-binding enzyme C-terminal domain AM354_RS16610 PF00668 Condensation domain AM354_RS16610 PF00550 Phosphopantetheine attachment site AM354_RS16610 PF00975 Thioesterase domain AM354_RS16610 PF00501 AMP-binding enzyme AM354_RS16615 PF00117 Glutamine amidotransferase class-I AM354_RS16615 PF06418 CTP synthase N-terminus AM354_RS16620 PF03279 Bacterial lipid A biosynthesis acyltransferase AM354_RS16635 PF02954 Bacterial regulatory protein, Fis family AM354_RS16640 PF01207 Dihydrouridine synthase (Dus) AM354_RS16650 PF00474 Sodium:solute symporter family AM354_RS16655 PF06196 Protein of unknown function (DUF997) AM354_RS16660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM354_RS16660 PF02785 Biotin carboxylase C-terminal domain AM354_RS16660 PF00289 Biotin carboxylase, N-terminal domain AM354_RS16665 PF00364 Biotin-requiring enzyme AM354_RS16670 PF01220 Dehydroquinase class II AM354_RS16675 PF01794 Ferric reductase like transmembrane component AM354_RS16680 PF00174 Oxidoreductase molybdopterin binding domain AM354_RS16685 PF00107 Zinc-binding dehydrogenase AM354_RS16685 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS16690 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS16690 PF00563 EAL domain AM354_RS16690 PF17157 Gammaproteobacterial periplasmic sensor domain AM354_RS16700 PF04085 rod shape-determining protein MreC AM354_RS16705 PF04093 rod shape-determining protein MreD AM354_RS16710 PF02545 Maf-like protein AM354_RS16715 PF00575 S1 RNA binding domain AM354_RS16715 PF10150 Ribonuclease E/G family AM354_RS16720 PF13502 AsmA-like C-terminal region AM354_RS16720 PF13116 Protein of unknown function AM354_RS16725 PF00795 Carbon-nitrogen hydrolase AM354_RS16730 PF01523 Putative modulator of DNA gyrase AM354_RS16735 PF02611 CDP-diacylglycerol pyrophosphatase AM354_RS16745 PF01156 Inosine-uridine preferring nucleoside hydrolase AM354_RS16760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS16760 PF03466 LysR substrate binding domain AM354_RS16765 PF07869 Protein of unknown function (DUF1656) AM354_RS16770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS16775 PF04632 Fusaric acid resistance protein family AM354_RS16780 PF00545 ribonuclease AM354_RS16785 PF01337 Barstar (barnase inhibitor) AM354_RS16790 PF04751 Protein of unknown function (DUF615) AM354_RS16795 PF01523 Putative modulator of DNA gyrase AM354_RS16800 PF07361 Cytochrome b562 AM354_RS16805 PF02311 AraC-like ligand binding domain AM354_RS16805 PF12833 Helix-turn-helix domain AM354_RS16815 PF02911 Formyl transferase, C-terminal domain AM354_RS16815 PF00551 Formyl transferase AM354_RS16825 PF01272 Transcription elongation factor, GreA/GreB, C-term AM354_RS16825 PF14760 Rnk N-terminus AM354_RS16855 PF01979 Amidohydrolase family AM354_RS16860 PF03841 L-seryl-tRNA selenium transferase AM354_RS16865 PF07071 KDGP aldolase AM354_RS16875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM354_RS16875 PF00874 PRD domain AM354_RS16875 PF05043 Mga helix-turn-helix domain AM354_RS16875 PF08279 HTH domain AM354_RS16880 PF01381 Helix-turn-helix AM354_RS16885 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AM354_RS16890 PF00381 PTS HPr component phosphorylation site AM354_RS16895 PF03668 P-loop ATPase protein family AM354_RS16900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM354_RS16905 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM354_RS16910 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM354_RS16910 PF04963 Sigma-54 factor, core binding domain AM354_RS16910 PF04552 Sigma-54, DNA binding domain AM354_RS16915 PF00005 ABC transporter AM354_RS16915 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM354_RS16920 PF03968 OstA-like protein AM354_RS16925 PF06835 Lipopolysaccharide-assembly, LptC-related AM354_RS16935 PF00571 CBS domain AM354_RS16935 PF01380 SIS domain AM354_RS16940 PF01699 Sodium/calcium exchanger protein AM354_RS16945 PF00005 ABC transporter AM354_RS16950 PF02405 Permease MlaE AM354_RS16955 PF02470 MlaD protein AM354_RS16960 PF05494 MlaC protein AM354_RS16965 PF13466 STAS domain AM354_RS16970 PF01722 BolA-like protein AM354_RS16975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM354_RS16980 PF13180 PDZ domain AM354_RS16985 PF13180 PDZ domain AM354_RS16985 PF00595 PDZ domain AM354_RS16990 PF06295 Protein of unknown function (DUF1043) AM354_RS16995 PF03969 AFG1-like ATPase AM354_RS17000 PF00572 Ribosomal protein L13 AM354_RS17005 PF00380 Ribosomal protein S9/S16 AM354_RS17015 PF00043 Glutathione S-transferase, C-terminal domain AM354_RS17015 PF02798 Glutathione S-transferase, N-terminal domain AM354_RS17020 PF04386 Stringent starvation protein B AM354_RS17030 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS17030 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM354_RS17035 PF01493 GXGXG motif AM354_RS17035 PF01645 Conserved region in glutamate synthase AM354_RS17035 PF04898 Glutamate synthase central domain AM354_RS17035 PF00310 Glutamine amidotransferases class-II AM354_RS17045 PF16199 Radical_SAM C-terminal domain AM354_RS17045 PF04055 Radical SAM superfamily AM354_RS17055 PF00989 PAS fold AM354_RS17055 PF00072 Response regulator receiver domain AM354_RS17055 PF18415 Histidine kinase receptor ArcB trans-membrane domain AM354_RS17055 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS17055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS17055 PF01627 Hpt domain AM354_RS17065 PF00912 Transglycosylase AM354_RS17070 PF04972 BON domain AM354_RS17075 PF13580 SIS domain AM354_RS17080 PF02021 Uncharacterised protein family UPF0102 AM354_RS17085 PF04348 LppC putative lipoprotein AM354_RS17090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM354_RS17100 PF02678 Pirin AM354_RS17100 PF17954 Quercetinase C-terminal cupin domain AM354_RS17105 PF03466 LysR substrate binding domain AM354_RS17105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS17110 PF13409 Glutathione S-transferase, N-terminal domain AM354_RS17115 PF07681 DoxX AM354_RS17120 PF13997 YqjK-like protein AM354_RS17125 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AM354_RS17130 PF05957 Bacterial protein of unknown function (DUF883) AM354_RS17140 PF13721 SecD export protein N-terminal TM region AM354_RS17145 PF09335 SNARE associated Golgi protein AM354_RS17155 PF00392 Bacterial regulatory proteins, gntR family AM354_RS17155 PF07729 FCD domain AM354_RS17160 PF07690 Major Facilitator Superfamily AM354_RS17165 PF02614 Glucuronate isomerase AM354_RS17170 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM354_RS17170 PF08666 SAF domain AM354_RS17175 PF00375 Sodium:dicarboxylate symporter family AM354_RS17180 PF03741 Integral membrane protein TerC family AM354_RS17185 PF02540 NAD synthase AM354_RS17185 PF00117 Glutamine amidotransferase class-I AM354_RS17185 PF00958 GMP synthase C terminal domain AM354_RS17190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM354_RS17195 PF01863 Protein of unknown function DUF45 AM354_RS17200 PF05175 Methyltransferase small domain AM354_RS17205 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS17205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM354_RS17210 PF12848 ABC transporter AM354_RS17210 PF00005 ABC transporter AM354_RS17215 PF00392 Bacterial regulatory proteins, gntR family AM354_RS17215 PF00155 Aminotransferase class I and II AM354_RS17220 PF00202 Aminotransferase class-III AM354_RS17225 PF00171 Aldehyde dehydrogenase family AM354_RS17235 PF02798 Glutathione S-transferase, N-terminal domain AM354_RS17235 PF14834 Glutathione S-transferase, C-terminal domain AM354_RS17245 PF00583 Acetyltransferase (GNAT) family AM354_RS17255 PF03167 Uracil DNA glycosylase superfamily AM354_RS17260 PF00140 Sigma-70 factor, region 1.2 AM354_RS17260 PF04542 Sigma-70 region 2 AM354_RS17260 PF04539 Sigma-70 region 3 AM354_RS17260 PF03979 Sigma-70 factor, region 1.1 AM354_RS17260 PF04546 Sigma-70, non-essential region AM354_RS17260 PF04545 Sigma-70, region 4 AM354_RS17265 PF08278 DNA primase DnaG DnaB-binding AM354_RS17265 PF08275 DNA primase catalytic core, N-terminal domain AM354_RS17265 PF01807 CHC2 zinc finger AM354_RS17265 PF10410 DnaB-helicase binding domain of primase AM354_RS17270 PF01165 Ribosomal protein S21 AM354_RS17275 PF00814 Glycoprotease family AM354_RS17280 PF02660 Glycerol-3-phosphate acyltransferase AM354_RS17285 PF02152 Dihydroneopterin aldolase AM354_RS17290 PF02673 Bacitracin resistance protein BacA AM354_RS17295 PF01743 Poly A polymerase head domain AM354_RS17295 PF12627 Probable RNA and SrmB- binding site of polymerase A AM354_RS17295 PF01966 HD domain AM354_RS17300 PF08239 Bacterial SH3 domain AM354_RS17305 PF01928 CYTH domain AM354_RS17310 PF08335 GlnD PII-uridylyltransferase AM354_RS17310 PF03710 Glutamate-ammonia ligase adenylyltransferase AM354_RS17315 PF00294 pfkB family carbohydrate kinase AM354_RS17315 PF01467 Cytidylyltransferase-like AM354_RS17320 PF04380 Membrane fusogenic activity AM354_RS17325 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM354_RS17330 PF00245 Alkaline phosphatase AM354_RS17335 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM354_RS17340 PF03738 Glutathionylspermidine synthase preATP-grasp AM354_RS17345 PF06693 Protein of unknown function (DUF1190) AM354_RS17350 PF00465 Iron-containing alcohol dehydrogenase AM354_RS17355 PF02733 Dak1 domain AM354_RS17360 PF02734 DAK2 domain AM354_RS17365 PF03610 PTS system fructose IIA component AM354_RS17365 PF05524 PEP-utilising enzyme, N-terminal AM354_RS17365 PF00391 PEP-utilising enzyme, mobile domain AM354_RS17365 PF00381 PTS HPr component phosphorylation site AM354_RS17370 PF02954 Bacterial regulatory protein, Fis family AM354_RS17370 PF00989 PAS fold AM354_RS17370 PF00158 Sigma-54 interaction domain AM354_RS17375 PF02321 Outer membrane efflux protein AM354_RS17380 PF00293 NUDIX domain AM354_RS17385 PF06853 Protein of unknown function (DUF1249) AM354_RS17390 PF00149 Calcineurin-like phosphoesterase AM354_RS17395 PF05728 Uncharacterised protein family (UPF0227) AM354_RS17400 PF00986 DNA gyrase B subunit, carboxyl terminus AM354_RS17400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS17400 PF01751 Toprim domain AM354_RS17400 PF00204 DNA gyrase B AM354_RS17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS17405 PF03466 LysR substrate binding domain AM354_RS17410 PF03992 Antibiotic biosynthesis monooxygenase AM354_RS17415 PF02525 Flavodoxin-like fold AM354_RS17420 PF03989 DNA gyrase C-terminal domain, beta-propeller AM354_RS17420 PF00521 DNA gyrase/topoisomerase IV, subunit A AM354_RS17425 PF01553 Acyltransferase AM354_RS17430 PF07731 Multicopper oxidase AM354_RS17430 PF07732 Multicopper oxidase AM354_RS17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS17435 PF03466 LysR substrate binding domain AM354_RS17440 PF01048 Phosphorylase superfamily AM354_RS17445 PF03825 Nucleoside H+ symporter AM354_RS17450 PF00294 pfkB family carbohydrate kinase AM354_RS17465 PF11842 Domain of unknown function (DUF3362) AM354_RS17465 PF04055 Radical SAM superfamily AM354_RS17465 PF08497 Radical SAM N-terminal AM354_RS17505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM354_RS17510 PF03466 LysR substrate binding domain AM354_RS17510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS17515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS17515 PF03466 LysR substrate binding domain AM354_RS17520 PF00753 Metallo-beta-lactamase superfamily AM354_RS17550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM354_RS17550 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS17565 PF12464 Maltose acetyltransferase AM354_RS17565 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS17570 PF01306 LacY proton/sugar symporter AM354_RS17575 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM354_RS17575 PF00703 Glycosyl hydrolases family 2 AM354_RS17575 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM354_RS17575 PF16353 Domain of unknown function(DUF4981) AM354_RS17575 PF02929 Beta galactosidase small chain AM354_RS17580 PF00356 Bacterial regulatory proteins, lacI family AM354_RS17585 PF00107 Zinc-binding dehydrogenase AM354_RS17585 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS17590 PF02371 Transposase IS116/IS110/IS902 family AM354_RS17590 PF01548 Transposase AM354_RS17600 PF00239 Resolvase, N terminal domain AM354_RS17600 PF02796 Helix-turn-helix domain of resolvase AM354_RS17615 PF03358 NADPH-dependent FMN reductase AM354_RS17620 PF01022 Bacterial regulatory protein, arsR family AM354_RS17625 PF02040 Arsenical pump membrane protein AM354_RS17645 PF02371 Transposase IS116/IS110/IS902 family AM354_RS17645 PF01548 Transposase AM354_RS17660 PF05717 IS66 Orf2 like protein AM354_RS17665 PF00005 ABC transporter AM354_RS17670 PF01032 FecCD transport family AM354_RS17675 PF01032 FecCD transport family AM354_RS17680 PF01497 Periplasmic binding protein AM354_RS17685 PF07660 Secretin and TonB N terminus short domain AM354_RS17685 PF00593 TonB dependent receptor AM354_RS17685 PF07715 TonB-dependent Receptor Plug Domain AM354_RS17690 PF16220 Domain of unknown function (DUF4880) AM354_RS17690 PF04773 FecR protein AM354_RS17695 PF08281 Sigma-70, region 4 AM354_RS17695 PF04542 Sigma-70 region 2 AM354_RS17715 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS17715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM354_RS17720 PF13737 Transposase DDE domain AM354_RS17740 PF03358 NADPH-dependent FMN reductase AM354_RS17765 PF03960 ArsC family AM354_RS17770 PF02040 Arsenical pump membrane protein AM354_RS17775 PF02374 Anion-transporting ATPase AM354_RS17780 PF06953 Arsenical resistance operon trans-acting repressor ArsD AM354_RS17785 PF01022 Bacterial regulatory protein, arsR family AM354_RS17790 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS17795 PF13737 Transposase DDE domain AM354_RS17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS17815 PF00672 HAMP domain AM354_RS17815 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS17820 PF00072 Response regulator receiver domain AM354_RS17820 PF00486 Transcriptional regulatory protein, C terminal AM354_RS17825 PF02321 Outer membrane efflux protein AM354_RS17830 PF11604 Copper binding periplasmic protein CusF AM354_RS17835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS17840 PF00873 AcrB/AcrD/AcrF family AM354_RS17850 PF04945 YHS domain AM354_RS17860 PF01476 LysM domain AM354_RS17860 PF08525 Opacity-associated protein A N-terminal motif AM354_RS17860 PF01551 Peptidase family M23 AM354_RS17870 PF07732 Multicopper oxidase AM354_RS17870 PF07731 Multicopper oxidase AM354_RS17870 PF00394 Multicopper oxidase AM354_RS17875 PF05275 Copper resistance protein B precursor (CopB) AM354_RS17880 PF04234 CopC domain AM354_RS17885 PF05425 Copper resistance protein D AM354_RS17890 PF00486 Transcriptional regulatory protein, C terminal AM354_RS17890 PF00072 Response regulator receiver domain AM354_RS17895 PF00672 HAMP domain AM354_RS17895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS17895 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS17910 PF05717 IS66 Orf2 like protein AM354_RS17945 PF00756 Putative esterase AM354_RS17955 PF00107 Zinc-binding dehydrogenase AM354_RS17955 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS17960 PF02583 Metal-sensitive transcriptional repressor AM354_RS17995 PF01464 Transglycosylase SLT domain AM354_RS18000 PF00248 Aldo/keto reductase family AM354_RS18005 PF00465 Iron-containing alcohol dehydrogenase AM354_RS18010 PF06719 AraC-type transcriptional regulator N-terminus AM354_RS18010 PF12833 Helix-turn-helix domain AM354_RS18015 PF09335 SNARE associated Golgi protein AM354_RS18020 PF01053 Cys/Met metabolism PLP-dependent enzyme AM354_RS18025 PF01618 MotA/TolQ/ExbB proton channel family AM354_RS18030 PF02472 Biopolymer transport protein ExbD/TolR AM354_RS18035 PF13407 Periplasmic binding protein domain AM354_RS18035 PF00356 Bacterial regulatory proteins, lacI family AM354_RS18040 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM354_RS18040 PF08244 Glycosyl hydrolases family 32 C terminal AM354_RS18045 PF02378 Phosphotransferase system, EIIC AM354_RS18045 PF00367 phosphotransferase system, EIIB AM354_RS18055 PF00294 pfkB family carbohydrate kinase AM354_RS18060 PF03806 AbgT putative transporter family AM354_RS18065 PF01546 Peptidase family M20/M25/M40 AM354_RS18070 PF07687 Peptidase dimerisation domain AM354_RS18070 PF01546 Peptidase family M20/M25/M40 AM354_RS18075 PF03466 LysR substrate binding domain AM354_RS18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS18080 PF07660 Secretin and TonB N terminus short domain AM354_RS18080 PF07715 TonB-dependent Receptor Plug Domain AM354_RS18080 PF00593 TonB dependent receptor AM354_RS18090 PF04185 Phosphoesterase family AM354_RS18090 PF05506 Domain of unknown function (DUF756) AM354_RS18095 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM354_RS18095 PF14489 QueF-like protein AM354_RS18120 PF00583 Acetyltransferase (GNAT) family AM354_RS18125 PF00756 Putative esterase AM354_RS18135 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM354_RS18155 PF00419 Fimbrial protein AM354_RS18165 PF13953 PapC C-terminal domain AM354_RS18165 PF13954 PapC N-terminal domain AM354_RS18165 PF00577 Outer membrane usher protein AM354_RS18170 PF02753 Pili assembly chaperone PapD, C-terminal domain AM354_RS18170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM354_RS18175 PF00419 Fimbrial protein AM354_RS18190 PF00419 Fimbrial protein AM354_RS18210 PF03796 DnaB-like helicase C terminal domain AM354_RS18210 PF00772 DnaB-like helicase N terminal domain AM354_RS18250 PF01751 Toprim domain AM354_RS18250 PF01131 DNA topoisomerase AM354_RS18265 PF01252 Signal peptidase (SPase) II AM354_RS18275 PF13411 MerR HTH family regulatory protein AM354_RS18285 PF00436 Single-strand binding protein family AM354_RS18445 PF00717 Peptidase S24-like AM354_RS18450 PF11798 IMS family HHH motif AM354_RS18450 PF11799 impB/mucB/samB family C-terminal domain AM354_RS18450 PF00817 impB/mucB/samB family AM354_RS18450 PF13438 Domain of unknown function (DUF4113) AM354_RS18485 PF02796 Helix-turn-helix domain of resolvase AM354_RS18485 PF00239 Resolvase, N terminal domain AM354_RS18510 PF02796 Helix-turn-helix domain of resolvase AM354_RS18510 PF00239 Resolvase, N terminal domain AM354_RS18515 PF05052 MerE protein AM354_RS18520 PF13411 MerR HTH family regulatory protein AM354_RS18525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM354_RS18525 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS18525 PF00403 Heavy-metal-associated domain AM354_RS18535 PF00403 Heavy-metal-associated domain AM354_RS18540 PF02411 MerT mercuric transport protein AM354_RS18545 PF09278 MerR, DNA binding AM354_RS18545 PF00376 MerR family regulatory protein AM354_RS18550 PF01548 Transposase AM354_RS18550 PF02371 Transposase IS116/IS110/IS902 family AM354_RS18575 PF02371 Transposase IS116/IS110/IS902 family AM354_RS18575 PF01548 Transposase AM354_RS18585 PF06778 Chlorite dismutase AM354_RS18595 PF02371 Transposase IS116/IS110/IS902 family AM354_RS18595 PF01548 Transposase AM354_RS18610 PF03358 NADPH-dependent FMN reductase AM354_RS18615 PF03960 ArsC family AM354_RS18620 PF02040 Arsenical pump membrane protein AM354_RS18625 PF01022 Bacterial regulatory protein, arsR family AM354_RS18630 PF00916 Sulfate permease family AM354_RS18630 PF01740 STAS domain AM354_RS18635 PF00582 Universal stress protein family AM354_RS18645 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM354_RS18650 PF06965 Na+/H+ antiporter 1 AM354_RS18655 PF00893 Small Multidrug Resistance protein AM354_RS18660 PF02796 Helix-turn-helix domain of resolvase AM354_RS18660 PF00239 Resolvase, N terminal domain AM354_RS18665 PF13700 Domain of unknown function (DUF4158) AM354_RS18665 PF01526 Tn3 transposase DDE domain AM354_RS18675 PF13411 MerR HTH family regulatory protein AM354_RS18680 PF12324 Helix-turn-helix domain of alkylmercury lyase AM354_RS18680 PF03243 Alkylmercury lyase AM354_RS18690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM354_RS18690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS18690 PF00403 Heavy-metal-associated domain AM354_RS18695 PF00403 Heavy-metal-associated domain AM354_RS18700 PF02411 MerT mercuric transport protein AM354_RS18705 PF09278 MerR, DNA binding AM354_RS18705 PF00376 MerR family regulatory protein AM354_RS18710 PF01548 Transposase AM354_RS18710 PF02371 Transposase IS116/IS110/IS902 family AM354_RS18775 PF12462 DNA helicase IV / RNA helicase N terminal AM354_RS18775 PF00580 UvrD/REP helicase N-terminal domain AM354_RS18775 PF13361 UvrD-like helicase C-terminal domain AM354_RS18785 PF00589 Phage integrase family AM354_RS18795 PF01276 Orn/Lys/Arg decarboxylase, major domain AM354_RS18795 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM354_RS18795 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM354_RS18800 PF01464 Transglycosylase SLT domain AM354_RS18800 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AM354_RS18805 PF04362 Bacterial Fe(2+) trafficking AM354_RS18810 PF14815 NUDIX domain AM354_RS18810 PF00730 HhH-GPD superfamily base excision DNA repair protein AM354_RS18810 PF00633 Helix-hairpin-helix motif AM354_RS18815 PF02390 Putative methyltransferase AM354_RS18820 PF04320 Protein with unknown function (DUF469) AM354_RS18825 PF04960 Glutaminase AM354_RS18830 PF11101 Protein of unknown function (DUF2884) AM354_RS18840 PF04055 Radical SAM superfamily AM354_RS18840 PF06969 HemN C-terminal domain AM354_RS18845 PF01725 Ham1 family AM354_RS18850 PF02594 Uncharacterised ACR, YggU family COG1872 AM354_RS18855 PF02325 YGGT family AM354_RS18860 PF03807 NADP oxidoreductase coenzyme F420-dependent AM354_RS18860 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM354_RS18865 PF01168 Alanine racemase, N-terminal domain AM354_RS18870 PF00437 Type II/IV secretion system protein AM354_RS18875 PF03652 Holliday junction resolvase AM354_RS18880 PF02622 Uncharacterized ACR, COG1678 AM354_RS18885 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM354_RS18885 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM354_RS18890 PF04452 RNA methyltransferase AM354_RS18895 PF04231 Endonuclease I AM354_RS18900 PF17283 SprT-like zinc ribbon domain AM354_RS18900 PF10263 SprT-like family AM354_RS18905 PF05683 Fumarase C-terminus AM354_RS18905 PF05681 Fumarate hydratase (Fumerase) AM354_RS18910 PF12833 Helix-turn-helix domain AM354_RS18910 PF06445 GyrI-like small molecule binding domain AM354_RS18915 PF13478 XdhC Rossmann domain AM354_RS18915 PF02625 XdhC and CoxI family AM354_RS18925 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM354_RS18925 PF00034 Cytochrome c AM354_RS18925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM354_RS18930 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS18930 PF01799 [2Fe-2S] binding domain AM354_RS18935 PF00034 Cytochrome c AM354_RS18935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM354_RS18935 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM354_RS18940 PF00324 Amino acid permease AM354_RS18945 PF00392 Bacterial regulatory proteins, gntR family AM354_RS18945 PF07729 FCD domain AM354_RS18950 PF00456 Transketolase, thiamine diphosphate binding domain AM354_RS18950 PF17831 Pyruvate dehydrogenase E1 component middle domain AM354_RS18955 PF00364 Biotin-requiring enzyme AM354_RS18955 PF02817 e3 binding domain AM354_RS18955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM354_RS18960 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS18960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM354_RS18965 PF00330 Aconitase family (aconitate hydratase) AM354_RS18965 PF06434 Aconitate hydratase 2 N-terminus AM354_RS18965 PF11791 Aconitate B N-terminal domain AM354_RS18970 PF06062 Uncharacterised protein family (UPF0231) AM354_RS18975 PF02675 S-adenosylmethionine decarboxylase AM354_RS18980 PF17284 Spermidine synthase tetramerisation domain AM354_RS18985 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM354_RS18990 PF00394 Multicopper oxidase AM354_RS18990 PF07731 Multicopper oxidase AM354_RS18990 PF07732 Multicopper oxidase AM354_RS18990 PF10518 TAT (twin-arginine translocation) pathway signal sequence AM354_RS18995 PF00156 Phosphoribosyl transferase domain AM354_RS19000 PF00484 Carbonic anhydrase AM354_RS19005 PF00005 ABC transporter AM354_RS19010 PF01061 ABC-2 type transporter AM354_RS19015 PF01522 Polysaccharide deacetylase AM354_RS19020 PF02261 Aspartate decarboxylase AM354_RS19025 PF02569 Pantoate-beta-alanine ligase AM354_RS19030 PF02548 Ketopantoate hydroxymethyltransferase AM354_RS19035 PF00072 Response regulator receiver domain AM354_RS19035 PF00486 Transcriptional regulatory protein, C terminal AM354_RS19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS19040 PF08521 Two-component sensor kinase N-terminal AM354_RS19040 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS19045 PF02656 Domain of unknown function (DUF202) AM354_RS19050 PF02656 Domain of unknown function (DUF202) AM354_RS19055 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM354_RS19060 PF12627 Probable RNA and SrmB- binding site of polymerase A AM354_RS19060 PF12626 Polymerase A arginine-rich C-terminus AM354_RS19060 PF01743 Poly A polymerase head domain AM354_RS19065 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM354_RS19070 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM354_RS19080 PF03749 Sugar fermentation stimulation protein RE domain AM354_RS19080 PF17746 SfsA N-terminal OB domain AM354_RS19085 PF02834 LigT like Phosphoesterase AM354_RS19090 PF08482 ATP-dependent helicase C-terminal AM354_RS19090 PF00270 DEAD/DEAH box helicase AM354_RS19090 PF04408 Helicase associated domain (HA2) AM354_RS19090 PF00271 Helicase conserved C-terminal domain AM354_RS19095 PF00905 Penicillin binding protein transpeptidase domain AM354_RS19095 PF00912 Transglycosylase AM354_RS19095 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AM354_RS19095 PF14814 Bifunctional transglycosylase second domain AM354_RS19100 PF00593 TonB dependent receptor AM354_RS19100 PF07715 TonB-dependent Receptor Plug Domain AM354_RS19105 PF00005 ABC transporter AM354_RS19110 PF01497 Periplasmic binding protein AM354_RS19115 PF01032 FecCD transport family AM354_RS19130 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM354_RS19130 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM354_RS19130 PF02772 S-adenosylmethionine synthetase, central domain AM354_RS19135 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM354_RS19135 PF17944 Arginine decarboxylase C-terminal helical extension AM354_RS19135 PF17810 Arginine decarboxylase helical bundle domain AM354_RS19140 PF00491 Arginase family AM354_RS19145 PF01848 Hok/gef family AM354_RS19150 PF07690 Major Facilitator Superfamily AM354_RS19155 PF00355 Rieske [2Fe-2S] domain AM354_RS19165 PF00355 Rieske [2Fe-2S] domain AM354_RS19175 PF09339 IclR helix-turn-helix domain AM354_RS19175 PF01614 Bacterial transcriptional regulator AM354_RS19185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS19185 PF14759 Reductase C-terminal AM354_RS19200 PF00561 alpha/beta hydrolase fold AM354_RS19210 PF03447 Homoserine dehydrogenase, NAD binding domain AM354_RS19210 PF01958 Domain of unknown function DUF108 AM354_RS19215 PF00171 Aldehyde dehydrogenase family AM354_RS19220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS19220 PF00205 Thiamine pyrophosphate enzyme, central domain AM354_RS19220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS19225 PF01435 Peptidase family M48 AM354_RS19230 PF02780 Transketolase, C-terminal domain AM354_RS19230 PF02779 Transketolase, pyrimidine binding domain AM354_RS19230 PF00456 Transketolase, thiamine diphosphate binding domain AM354_RS19235 PF05525 Branched-chain amino acid transport protein AM354_RS19255 PF08402 TOBE domain AM354_RS19255 PF00005 ABC transporter AM354_RS19260 PF00970 Oxidoreductase FAD-binding domain AM354_RS19260 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS19260 PF00175 Oxidoreductase NAD-binding domain AM354_RS19265 PF00171 Aldehyde dehydrogenase family AM354_RS19270 PF00355 Rieske [2Fe-2S] domain AM354_RS19270 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM354_RS19275 PF02028 BCCT, betaine/carnitine/choline family transporter AM354_RS19280 PF00180 Isocitrate/isopropylmalate dehydrogenase AM354_RS19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS19285 PF03466 LysR substrate binding domain AM354_RS19290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM354_RS19290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM354_RS19295 PF00162 Phosphoglycerate kinase AM354_RS19300 PF01116 Fructose-bisphosphate aldolase class-II AM354_RS19310 PF00924 Mechanosensitive ion channel AM354_RS19310 PF05552 Conserved TM helix AM354_RS19315 PF07690 Major Facilitator Superfamily AM354_RS19320 PF08267 Cobalamin-independent synthase, N-terminal domain AM354_RS19320 PF01717 Cobalamin-independent synthase, Catalytic domain AM354_RS19330 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM354_RS19335 PF00849 RNA pseudouridylate synthase AM354_RS19340 PF00596 Class II Aldolase and Adducin N-terminal domain AM354_RS19345 PF01261 Xylose isomerase-like TIM barrel AM354_RS19350 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM354_RS19355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM354_RS19355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM354_RS19360 PF07690 Major Facilitator Superfamily AM354_RS19365 PF04074 YhcH/YjgK/YiaL AM354_RS19370 PF02615 Malate/L-lactate dehydrogenase AM354_RS19385 PF02653 Branched-chain amino acid transport system / permease component AM354_RS19390 PF00005 ABC transporter AM354_RS19395 PF01614 Bacterial transcriptional regulator AM354_RS19395 PF09339 IclR helix-turn-helix domain AM354_RS19400 PF01810 LysE type translocator AM354_RS19405 PF04402 Protein of unknown function (DUF541) AM354_RS19410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS19410 PF03466 LysR substrate binding domain AM354_RS19415 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM354_RS19420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM354_RS19420 PF01842 ACT domain AM354_RS19420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM354_RS19425 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM354_RS19435 PF05164 Cell division protein ZapA AM354_RS19440 PF03695 Uncharacterised protein family (UPF0149) AM354_RS19445 PF00557 Metallopeptidase family M24 AM354_RS19445 PF05195 Aminopeptidase P, N-terminal domain AM354_RS19450 PF01494 FAD binding domain AM354_RS19455 PF01494 FAD binding domain AM354_RS19460 PF01571 Aminomethyltransferase folate-binding domain AM354_RS19460 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM354_RS19465 PF01597 Glycine cleavage H-protein AM354_RS19470 PF02347 Glycine cleavage system P-protein AM354_RS19485 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS19485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS19490 PF00072 Response regulator receiver domain AM354_RS19490 PF00486 Transcriptional regulatory protein, C terminal AM354_RS19515 PF00392 Bacterial regulatory proteins, gntR family AM354_RS19515 PF07729 FCD domain AM354_RS19525 PF01425 Amidase AM354_RS19535 PF00083 Sugar (and other) transporter AM354_RS19540 PF08220 DeoR-like helix-turn-helix domain AM354_RS19540 PF00455 DeoR C terminal sensor domain AM354_RS19550 PF00005 ABC transporter AM354_RS19555 PF02653 Branched-chain amino acid transport system / permease component AM354_RS19560 PF02653 Branched-chain amino acid transport system / permease component AM354_RS19565 PF00834 Ribulose-phosphate 3 epimerase family AM354_RS19570 PF00480 ROK family AM354_RS19575 PF00294 pfkB family carbohydrate kinase AM354_RS19585 PF03006 Haemolysin-III related AM354_RS19595 PF01571 Aminomethyltransferase folate-binding domain AM354_RS19600 PF03937 Flavinator of succinate dehydrogenase AM354_RS19605 PF07254 Membrane-bound toxin component of toxin-antitoxin system AM354_RS19610 PF00072 Response regulator receiver domain AM354_RS19610 PF00486 Transcriptional regulatory protein, C terminal AM354_RS19615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS19615 PF00672 HAMP domain AM354_RS19615 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS19620 PF06123 Inner membrane protein CreD AM354_RS19625 PF00258 Flavodoxin AM354_RS19630 PF02899 Phage integrase, N-terminal SAM-like domain AM354_RS19630 PF00589 Phage integrase family AM354_RS19635 PF13098 Thioredoxin-like domain AM354_RS19635 PF10411 Disulfide bond isomerase protein N-terminus AM354_RS19640 PF02272 DHHA1 domain AM354_RS19640 PF17768 RecJ OB domain AM354_RS19640 PF01368 DHH family AM354_RS19650 PF00152 tRNA synthetases class II (D, K and N) AM354_RS19650 PF01336 OB-fold nucleic acid binding domain AM354_RS19660 PF02028 BCCT, betaine/carnitine/choline family transporter AM354_RS19670 PF00266 Aminotransferase class-V AM354_RS19685 PF03729 Short repeat of unknown function (DUF308) AM354_RS19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS19690 PF03466 LysR substrate binding domain AM354_RS19695 PF00857 Isochorismatase family AM354_RS19700 PF01551 Peptidase family M23 AM354_RS19700 PF01476 LysM domain AM354_RS19705 PF06445 GyrI-like small molecule binding domain AM354_RS19710 PF00005 ABC transporter AM354_RS19710 PF00664 ABC transporter transmembrane region AM354_RS19715 PF00440 Bacterial regulatory proteins, tetR family AM354_RS19715 PF13977 BetI-type transcriptional repressor, C-terminal AM354_RS19720 PF02028 BCCT, betaine/carnitine/choline family transporter AM354_RS19730 PF07690 Major Facilitator Superfamily AM354_RS19735 PF17409 MoaF C-terminal domain AM354_RS19735 PF10703 MoaF N-terminal domain AM354_RS19740 PF01070 FMN-dependent dehydrogenase AM354_RS19745 PF02652 L-lactate permease AM354_RS19750 PF03466 LysR substrate binding domain AM354_RS19750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS19770 PF00664 ABC transporter transmembrane region AM354_RS19770 PF00005 ABC transporter AM354_RS19770 PF03412 Peptidase C39 family AM354_RS19775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS19780 PF02687 FtsX-like permease family AM354_RS19780 PF12704 MacB-like periplasmic core domain AM354_RS19780 PF00005 ABC transporter AM354_RS19785 PF02321 Outer membrane efflux protein AM354_RS19790 PF00109 Beta-ketoacyl synthase, N-terminal domain AM354_RS19790 PF02801 Beta-ketoacyl synthase, C-terminal domain AM354_RS19800 PF00589 Phage integrase family AM354_RS19805 PF00419 Fimbrial protein AM354_RS19810 PF02753 Pili assembly chaperone PapD, C-terminal domain AM354_RS19810 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM354_RS19815 PF00577 Outer membrane usher protein AM354_RS19815 PF13954 PapC N-terminal domain AM354_RS19815 PF13953 PapC C-terminal domain AM354_RS19820 PF00419 Fimbrial protein AM354_RS19825 PF00419 Fimbrial protein AM354_RS19830 PF00196 Bacterial regulatory proteins, luxR family AM354_RS19830 PF00072 Response regulator receiver domain AM354_RS19835 PF00196 Bacterial regulatory proteins, luxR family AM354_RS19840 PF00589 Phage integrase family AM354_RS19845 PF00005 ABC transporter AM354_RS19855 PF07690 Major Facilitator Superfamily AM354_RS19860 PF08220 DeoR-like helix-turn-helix domain AM354_RS19860 PF00455 DeoR C terminal sensor domain AM354_RS19865 PF08013 Tagatose 6 phosphate kinase AM354_RS19870 PF03830 PTS system sorbose subfamily IIB component AM354_RS19875 PF03609 PTS system sorbose-specific iic component AM354_RS19880 PF03613 PTS system mannose/fructose/sorbose family IID component AM354_RS19890 PF00005 ABC transporter AM354_RS19890 PF06472 ABC transporter transmembrane region 2 AM354_RS19910 PF03466 LysR substrate binding domain AM354_RS19910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS19915 PF03466 LysR substrate binding domain AM354_RS19915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS19920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM354_RS19920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM354_RS19925 PF01381 Helix-turn-helix AM354_RS19935 PF00356 Bacterial regulatory proteins, lacI family AM354_RS19945 PF01568 Molydopterin dinucleotide binding domain AM354_RS19945 PF00384 Molybdopterin oxidoreductase AM354_RS19950 PF13193 AMP-binding enzyme C-terminal domain AM354_RS19950 PF01553 Acyltransferase AM354_RS19950 PF00501 AMP-binding enzyme AM354_RS19955 PF07690 Major Facilitator Superfamily AM354_RS19960 PF00248 Aldo/keto reductase family AM354_RS19965 PF06004 Bacterial protein of unknown function (DUF903) AM354_RS19970 PF03741 Integral membrane protein TerC family AM354_RS19975 PF02976 DNA mismatch repair enzyme MutH AM354_RS19980 PF00293 NUDIX domain AM354_RS19985 PF05524 PEP-utilising enzyme, N-terminal AM354_RS19985 PF00391 PEP-utilising enzyme, mobile domain AM354_RS19985 PF02896 PEP-utilising enzyme, TIM barrel domain AM354_RS19985 PF01590 GAF domain AM354_RS19990 PF01790 Prolipoprotein diacylglyceryl transferase AM354_RS19995 PF00303 Thymidylate synthase AM354_RS20000 PF07963 Prokaryotic N-terminal methylation motif AM354_RS20020 PF17946 RecC C-terminal domain AM354_RS20025 PF16187 Middle or third domain of peptidase_M16 AM354_RS20025 PF05193 Peptidase M16 inactive domain AM354_RS20025 PF00675 Insulinase (Peptidase family M16) AM354_RS20030 PF13361 UvrD-like helicase C-terminal domain AM354_RS20030 PF12705 PD-(D/E)XK nuclease superfamily AM354_RS20030 PF00580 UvrD/REP helicase N-terminal domain AM354_RS20035 PF13538 UvrD-like helicase C-terminal domain AM354_RS20040 PF00696 Amino acid kinase family AM354_RS20040 PF00583 Acetyltransferase (GNAT) family AM354_RS20045 PF01520 N-acetylmuramoyl-L-alanine amidase AM354_RS20045 PF11741 AMIN domain AM354_RS20065 PF03562 MltA specific insert domain AM354_RS20065 PF06725 3D domain AM354_RS20070 PF00899 ThiF family AM354_RS20075 PF02657 Fe-S metabolism associated domain AM354_RS20080 PF00266 Aminotransferase class-V AM354_RS20085 PF06004 Bacterial protein of unknown function (DUF903) AM354_RS20090 PF03466 LysR substrate binding domain AM354_RS20090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS20095 PF04241 Protein of unknown function (DUF423) AM354_RS20100 PF01728 FtsJ-like methyltransferase AM354_RS20100 PF18125 RlmM ferredoxin-like domain AM354_RS20105 PF01367 5'-3' exonuclease, C-terminal SAM fold AM354_RS20105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM354_RS20110 PF11892 Domain of unknown function (DUF3412) AM354_RS20110 PF03641 Possible lysine decarboxylase AM354_RS20110 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM354_RS20115 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM354_RS20115 PF14489 QueF-like protein AM354_RS20120 PF07348 Syd protein (SUKH-2) AM354_RS20125 PF07690 Major Facilitator Superfamily AM354_RS20130 PF04287 tRNA pseudouridine synthase C AM354_RS20135 PF01835 MG2 domain AM354_RS20135 PF17962 Bacterial macroglobulin domain 6 AM354_RS20135 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AM354_RS20135 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AM354_RS20135 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AM354_RS20135 PF07703 Alpha-2-macroglobulin bait region domain AM354_RS20135 PF00207 Alpha-2-macroglobulin family AM354_RS20140 PF06832 Penicillin-Binding Protein C-terminus Family AM354_RS20140 PF00912 Transglycosylase AM354_RS20140 PF00905 Penicillin binding protein transpeptidase domain AM354_RS20145 PF00849 RNA pseudouridylate synthase AM354_RS20150 PF00258 Flavodoxin AM354_RS20155 PF11944 Protein of unknown function (DUF3461) AM354_RS20160 PF14602 Hexapeptide repeat of succinyl-transferase AM354_RS20160 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS20160 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM354_RS20165 PF01842 ACT domain AM354_RS20165 PF08335 GlnD PII-uridylyltransferase AM354_RS20165 PF01909 Nucleotidyltransferase domain AM354_RS20165 PF01966 HD domain AM354_RS20170 PF00557 Metallopeptidase family M24 AM354_RS20175 PF00318 Ribosomal protein S2 AM354_RS20180 PF00889 Elongation factor TS AM354_RS20185 PF00696 Amino acid kinase family AM354_RS20190 PF01765 Ribosome recycling factor AM354_RS20195 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM354_RS20195 PF13288 DXP reductoisomerase C-terminal domain AM354_RS20195 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM354_RS20200 PF01255 Putative undecaprenyl diphosphate synthase AM354_RS20210 PF17820 PDZ domain AM354_RS20210 PF02163 Peptidase family M50 AM354_RS20215 PF01103 Surface antigen AM354_RS20215 PF07244 Surface antigen variable number repeat AM354_RS20220 PF03938 Outer membrane protein (OmpH-like) AM354_RS20225 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM354_RS20225 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS20230 PF07977 FabA-like domain AM354_RS20235 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM354_RS20235 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS20240 PF02684 Lipid-A-disaccharide synthetase AM354_RS20245 PF01351 Ribonuclease HII AM354_RS20250 PF02811 PHP domain AM354_RS20250 PF01336 OB-fold nucleic acid binding domain AM354_RS20250 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM354_RS20250 PF14579 Helix-hairpin-helix motif AM354_RS20250 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM354_RS20255 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM354_RS20260 PF01276 Orn/Lys/Arg decarboxylase, major domain AM354_RS20260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM354_RS20260 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM354_RS20270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM354_RS20275 PF18500 CadC C-terminal domain 1 AM354_RS20275 PF00486 Transcriptional regulatory protein, C terminal AM354_RS20280 PF13520 Amino acid permease AM354_RS20285 PF01276 Orn/Lys/Arg decarboxylase, major domain AM354_RS20285 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM354_RS20285 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM354_RS20290 PF00854 POT family AM354_RS20295 PF09179 TilS substrate binding domain AM354_RS20295 PF01171 PP-loop family AM354_RS20295 PF11734 TilS substrate C-terminal domain AM354_RS20300 PF00034 Cytochrome c AM354_RS20305 PF07073 Modulator of Rho-dependent transcription termination (ROF) AM354_RS20310 PF06786 Uncharacterised protein family (UPF0253) AM354_RS20315 PF07152 YaeQ protein AM354_RS20320 PF00472 RF-1 domain AM354_RS20325 PF17185 NlpE C-terminal OB domain AM354_RS20325 PF04170 NlpE N-terminal domain AM354_RS20330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM354_RS20330 PF04073 Aminoacyl-tRNA editing domain AM354_RS20330 PF03129 Anticodon binding domain AM354_RS20335 PF18389 TrmO C-terminal domain AM354_RS20335 PF01980 tRNA-methyltransferase O AM354_RS20340 PF16358 RcsF lipoprotein AM354_RS20345 PF03180 NLPA lipoprotein AM354_RS20350 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS20355 PF09383 NIL domain AM354_RS20355 PF00005 ABC transporter AM354_RS20385 PF00083 Sugar (and other) transporter AM354_RS20390 PF13091 PLD-like domain AM354_RS20395 PF13607 Succinyl-CoA ligase like flavodoxin domain AM354_RS20395 PF00583 Acetyltransferase (GNAT) family AM354_RS20395 PF13380 CoA binding domain AM354_RS20400 PF03942 DTW domain AM354_RS20405 PF00085 Thioredoxin AM354_RS20410 PF00588 SpoU rRNA Methylase family AM354_RS20410 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM354_RS20415 PF07690 Major Facilitator Superfamily AM354_RS20420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS20420 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS20425 PF02321 Outer membrane efflux protein AM354_RS20430 PF01047 MarR family AM354_RS20435 PF05437 Branched-chain amino acid transport protein (AzlD) AM354_RS20440 PF03591 AzlC protein AM354_RS20445 PF07690 Major Facilitator Superfamily AM354_RS20450 PF03466 LysR substrate binding domain AM354_RS20450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS20455 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM354_RS20460 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS20465 PF00571 CBS domain AM354_RS20465 PF00005 ABC transporter AM354_RS20470 PF12431 Transcriptional regulator AM354_RS20470 PF00072 Response regulator receiver domain AM354_RS20475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS20475 PF17203 Single cache domain 3 AM354_RS20480 PF03390 2-hydroxycarboxylate transporter family AM354_RS20485 PF01734 Patatin-like phospholipase AM354_RS20490 PF00753 Metallo-beta-lactamase superfamily AM354_RS20505 PF00268 Ribonucleotide reductase, small chain AM354_RS20510 PF08343 Ribonucleotide reductase N-terminal AM354_RS20510 PF00317 Ribonucleotide reductase, all-alpha domain AM354_RS20510 PF02867 Ribonucleotide reductase, barrel domain AM354_RS20515 PF07972 NrdI Flavodoxin like AM354_RS20520 PF00462 Glutaredoxin AM354_RS20525 PF02627 Carboxymuconolactone decarboxylase family AM354_RS20530 PF00155 Aminotransferase class I and II AM354_RS20530 PF00392 Bacterial regulatory proteins, gntR family AM354_RS20535 PF05957 Bacterial protein of unknown function (DUF883) AM354_RS20540 PF06392 Acid shock protein repeat AM354_RS20550 PF07690 Major Facilitator Superfamily AM354_RS20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS20555 PF03466 LysR substrate binding domain AM354_RS20560 PF07690 Major Facilitator Superfamily AM354_RS20565 PF09400 Protein of unknown function (DUF2002) AM354_RS20570 PF06711 Protein of unknown function (DUF1198) AM354_RS20580 PF01713 Smr domain AM354_RS20585 PF07681 DoxX AM354_RS20590 PF06902 Divergent 4Fe-4S mono-cluster AM354_RS20595 PF14542 GCN5-related N-acetyl-transferase AM354_RS20610 PF03466 LysR substrate binding domain AM354_RS20610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS20615 PF00583 Acetyltransferase (GNAT) family AM354_RS20630 PF13186 Iron-sulfur cluster-binding domain AM354_RS20630 PF04055 Radical SAM superfamily AM354_RS20640 PF02656 Domain of unknown function (DUF202) AM354_RS20645 PF00392 Bacterial regulatory proteins, gntR family AM354_RS20645 PF07702 UTRA domain AM354_RS20655 PF02378 Phosphotransferase system, EIIC AM354_RS20655 PF00367 phosphotransferase system, EIIB AM354_RS20665 PF10749 Protein of unknown function (DUF2534) AM354_RS20670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS20670 PF03466 LysR substrate binding domain AM354_RS20675 PF11769 Protein of unknown function (DUF3313) AM354_RS20680 PF11742 Protein of unknown function (DUF3302) AM354_RS20685 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS20685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS20695 PF02321 Outer membrane efflux protein AM354_RS20700 PF00873 AcrB/AcrD/AcrF family AM354_RS20705 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS20705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS20715 PF16363 GDP-mannose 4,6 dehydratase AM354_RS20725 PF00440 Bacterial regulatory proteins, tetR family AM354_RS20725 PF08359 YsiA-like protein, C-terminal region AM354_RS20740 PF07022 Bacteriophage CI repressor helix-turn-helix domain AM354_RS20740 PF16452 Bacteriophage CI repressor C-terminal domain AM354_RS20745 PF06892 Phage regulatory protein CII (CP76) AM354_RS20770 PF05840 Bacteriophage replication gene A protein (GPA) AM354_RS20885 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM354_RS20930 PF01668 SmpB protein AM354_RS20935 PF03364 Polyketide cyclase / dehydrase and lipid transport AM354_RS20940 PF03658 RnfH family Ubiquitin AM354_RS20945 PF04355 SmpA / OmlA family AM354_RS20950 PF02463 RecF/RecN/SMC N terminal domain AM354_RS20955 PF01513 ATP-NAD kinase AM354_RS20960 PF01025 GrpE AM354_RS20965 PF03167 Uracil DNA glycosylase superfamily AM354_RS20970 PF01228 Glycine radical AM354_RS20980 PF12796 Ankyrin repeats (3 copies) AM354_RS20985 PF00271 Helicase conserved C-terminal domain AM354_RS20985 PF00270 DEAD/DEAH box helicase AM354_RS20990 PF05175 Methyltransferase small domain AM354_RS20995 PF02910 Fumarate reductase flavoprotein C-term AM354_RS20995 PF00890 FAD binding domain AM354_RS21000 PF08281 Sigma-70, region 4 AM354_RS21000 PF04542 Sigma-70 region 2 AM354_RS21005 PF03872 Anti sigma-E protein RseA, N-terminal domain AM354_RS21005 PF03873 Anti sigma-E protein RseA, C-terminal domain AM354_RS21010 PF03888 MucB/RseB N-terminal domain AM354_RS21010 PF17188 MucB/RseB C-terminal domain AM354_RS21025 PF03144 Elongation factor Tu domain 2 AM354_RS21025 PF06421 GTP-binding protein LepA C-terminus AM354_RS21025 PF00009 Elongation factor Tu GTP binding domain AM354_RS21025 PF00679 Elongation factor G C-terminus AM354_RS21030 PF10502 Signal peptidase, peptidase S26 AM354_RS21035 PF14622 Ribonuclease-III-like AM354_RS21035 PF00035 Double-stranded RNA binding motif AM354_RS21040 PF01926 50S ribosome-binding GTPase AM354_RS21040 PF07650 KH domain AM354_RS21045 PF02565 Recombination protein O C terminal AM354_RS21045 PF11967 Recombination protein O N terminal AM354_RS21050 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM354_RS21055 PF01648 4'-phosphopantetheinyl transferase superfamily AM354_RS21060 PF12838 4Fe-4S dicluster domain AM354_RS21065 PF01380 SIS domain AM354_RS21065 PF01418 Helix-turn-helix domain, rpiR family AM354_RS21070 PF13580 SIS domain AM354_RS21075 PF00367 phosphotransferase system, EIIB AM354_RS21075 PF02378 Phosphotransferase system, EIIC AM354_RS21090 PF14437 MafB19-like deaminase AM354_RS21095 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS21095 PF01464 Transglycosylase SLT domain AM354_RS21100 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM354_RS21100 PF02769 AIR synthase related protein, C-terminal domain AM354_RS21100 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM354_RS21105 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS21105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS21110 PF13942 YfhG lipoprotein AM354_RS21115 PF00072 Response regulator receiver domain AM354_RS21115 PF00158 Sigma-54 interaction domain AM354_RS21120 PF00795 Carbon-nitrogen hydrolase AM354_RS21120 PF02540 NAD synthase AM354_RS21125 PF00543 Nitrogen regulatory protein P-II AM354_RS21140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS21140 PF03466 LysR substrate binding domain AM354_RS21145 PF00171 Aldehyde dehydrogenase family AM354_RS21150 PF13416 Bacterial extracellular solute-binding protein AM354_RS21155 PF08402 TOBE domain AM354_RS21155 PF00005 ABC transporter AM354_RS21160 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS21165 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS21170 PF00171 Aldehyde dehydrogenase family AM354_RS21180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM354_RS21180 PF00034 Cytochrome c AM354_RS21185 PF00042 Globin AM354_RS21185 PF00970 Oxidoreductase FAD-binding domain AM354_RS21185 PF00175 Oxidoreductase NAD-binding domain AM354_RS21190 PF00464 Serine hydroxymethyltransferase AM354_RS21195 PF12832 MFS_1 like family AM354_RS21200 PF00874 PRD domain AM354_RS21205 PF06226 Protein of unknown function (DUF1007) AM354_RS21210 PF03824 High-affinity nickel-transport protein AM354_RS21215 PF00459 Inositol monophosphatase family AM354_RS21220 PF00588 SpoU rRNA Methylase family AM354_RS21225 PF02082 Transcriptional regulator AM354_RS21230 PF00266 Aminotransferase class-V AM354_RS21235 PF01592 NifU-like N terminal domain AM354_RS21240 PF01521 Iron-sulphur cluster biosynthesis AM354_RS21245 PF07743 HSCB C-terminal oligomerisation domain AM354_RS21245 PF00226 DnaJ domain AM354_RS21250 PF00012 Hsp70 protein AM354_RS21255 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS21260 PF04384 Iron-sulphur cluster assembly AM354_RS21265 PF00883 Cytosol aminopeptidase family, catalytic domain AM354_RS21265 PF12404 Peptidase AM354_RS21270 PF14581 SseB protein C-terminal domain AM354_RS21270 PF07179 SseB protein N-terminal domain AM354_RS21275 PF00334 Nucleoside diphosphate kinase AM354_RS21280 PF04055 Radical SAM superfamily AM354_RS21290 PF13464 Domain of unknown function (DUF4115) AM354_RS21295 PF04551 GcpE protein AM354_RS21300 PF03129 Anticodon binding domain AM354_RS21300 PF13393 Histidyl-tRNA synthetase AM354_RS21305 PF09976 Tetratricopeptide repeat-like domain AM354_RS21310 PF13360 PQQ-like domain AM354_RS21315 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM354_RS21315 PF01926 50S ribosome-binding GTPase AM354_RS21325 PF07191 zinc-ribbons AM354_RS21335 PF16485 Protealysin propeptide AM354_RS21335 PF01447 Thermolysin metallopeptidase, catalytic domain AM354_RS21335 PF02868 Thermolysin metallopeptidase, alpha-helical domain AM354_RS21340 PF00356 Bacterial regulatory proteins, lacI family AM354_RS21345 PF07690 Major Facilitator Superfamily AM354_RS21350 PF13802 Galactose mutarotase-like AM354_RS21350 PF17137 Domain of unknown function (DUF5110) AM354_RS21350 PF01055 Glycosyl hydrolases family 31 AM354_RS21350 PF16338 Domain of unknown function (DUF4968) AM354_RS21355 PF02601 Exonuclease VII, large subunit AM354_RS21355 PF13742 OB-fold nucleic acid binding domain AM354_RS21365 PF00571 CBS domain AM354_RS21365 PF00478 IMP dehydrogenase / GMP reductase domain AM354_RS21370 PF02540 NAD synthase AM354_RS21370 PF00958 GMP synthase C terminal domain AM354_RS21370 PF00117 Glutamine amidotransferase class-I AM354_RS21375 PF00589 Phage integrase family AM354_RS21375 PF13356 Arm DNA-binding domain AM354_RS21385 PF05063 MT-A70 AM354_RS21395 PF03837 RecT family AM354_RS21410 PF17762 HTH domain found in ParB protein AM354_RS21410 PF02195 ParB-like nuclease domain AM354_RS21450 PF00145 C-5 cytosine-specific DNA methylase AM354_RS21590 PF10549 ORF11CD3 domain AM354_RS21590 PF09669 Phage regulatory protein Rha (Phage_pRha) AM354_RS21610 PF04971 Bacteriophage P21 holin S AM354_RS21630 PF01638 HxlR-like helix-turn-helix AM354_RS21640 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS21640 PF01627 Hpt domain AM354_RS21640 PF00072 Response regulator receiver domain AM354_RS21640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM354_RS21640 PF00672 HAMP domain AM354_RS21640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS21645 PF00072 Response regulator receiver domain AM354_RS21645 PF00196 Bacterial regulatory proteins, luxR family AM354_RS21660 PF01479 S4 domain AM354_RS21660 PF00849 RNA pseudouridylate synthase AM354_RS21665 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM354_RS21665 PF04717 Type VI secretion system, phage-baseplate injector AM354_RS21665 PF13296 Putative type VI secretion system Rhs element Vgr AM354_RS21680 PF01638 HxlR-like helix-turn-helix AM354_RS21685 PF07690 Major Facilitator Superfamily AM354_RS21700 PF04632 Fusaric acid resistance protein family AM354_RS21705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM354_RS21705 PF00529 HlyD membrane-fusion protein of T1SS AM354_RS21720 PF02110 Hydroxyethylthiazole kinase family AM354_RS21725 PF08543 Phosphomethylpyrimidine kinase AM354_RS21735 PF01380 SIS domain AM354_RS21735 PF00571 CBS domain AM354_RS21740 PF08220 DeoR-like helix-turn-helix domain AM354_RS21740 PF00455 DeoR C terminal sensor domain AM354_RS21745 PF06923 Glucitol operon activator protein (GutM) AM354_RS21750 PF00106 short chain dehydrogenase AM354_RS21755 PF03829 PTS system glucitol/sorbitol-specific IIA component AM354_RS21760 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AM354_RS21760 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AM354_RS21765 PF03608 PTS system enzyme II sorbitol-specific factor AM354_RS21775 PF01791 DeoC/LacD family aldolase AM354_RS21780 PF00781 Diacylglycerol kinase catalytic domain AM354_RS21785 PF16325 Peptidase family U32 C-terminal domain AM354_RS21785 PF01136 Peptidase family U32 AM354_RS21790 PF07411 Domain of unknown function (DUF1508) AM354_RS21805 PF00486 Transcriptional regulatory protein, C terminal AM354_RS21805 PF00072 Response regulator receiver domain AM354_RS21810 PF00672 HAMP domain AM354_RS21810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS21810 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS21815 PF07690 Major Facilitator Superfamily AM354_RS21820 PF00873 AcrB/AcrD/AcrF family AM354_RS21825 PF00873 AcrB/AcrD/AcrF family AM354_RS21830 PF13533 Biotin-lipoyl like AM354_RS21835 PF00248 Aldo/keto reductase family AM354_RS21850 PF00012 Hsp70 protein AM354_RS21855 PF02805 Metal binding domain of Ada AM354_RS21855 PF06029 AlkA N-terminal domain AM354_RS21855 PF12833 Helix-turn-helix domain AM354_RS21855 PF00730 HhH-GPD superfamily base excision DNA repair protein AM354_RS21865 PF13426 PAS domain AM354_RS21865 PF08448 PAS fold AM354_RS21865 PF08447 PAS fold AM354_RS21865 PF05231 MASE1 AM354_RS21865 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS21865 PF00563 EAL domain AM354_RS21870 PF01769 Divalent cation transporter AM354_RS21870 PF03448 MgtE intracellular N domain AM354_RS21870 PF00571 CBS domain AM354_RS21880 PF02541 Ppx/GppA phosphatase family AM354_RS21885 PF13089 Polyphosphate kinase N-terminal domain AM354_RS21885 PF17941 Polyphosphate kinase C-terminal domain 1 AM354_RS21885 PF13090 Polyphosphate kinase C-terminal domain 2 AM354_RS21885 PF02503 Polyphosphate kinase middle domain AM354_RS21890 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS21895 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS21900 PF00005 ABC transporter AM354_RS21915 PF08479 POTRA domain, ShlB-type AM354_RS21915 PF17287 POTRA domain AM354_RS21915 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM354_RS21920 PF13332 Hemagglutinin repeat AM354_RS21920 PF05860 haemagglutination activity domain AM354_RS21920 PF05594 Haemagluttinin repeat AM354_RS21920 PF15526 Novel toxin 21 AM354_RS21920 PF04829 Pre-toxin domain with VENN motif AM354_RS21945 PF13302 Acetyltransferase (GNAT) domain AM354_RS21950 PF00551 Formyl transferase AM354_RS21955 PF02769 AIR synthase related protein, C-terminal domain AM354_RS21955 PF00586 AIR synthase related protein, N-terminal domain AM354_RS21965 PF00860 Permease family AM354_RS21975 PF04226 Transglycosylase associated protein AM354_RS21985 PF00308 Bacterial dnaA protein AM354_RS22000 PF03960 ArsC family AM354_RS22005 PF01435 Peptidase family M48 AM354_RS22005 PF07720 Tetratricopeptide repeat AM354_RS22015 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS22020 PF13404 AsnC-type helix-turn-helix domain AM354_RS22020 PF01037 Lrp/AsnC ligand binding domain AM354_RS22040 PF07715 TonB-dependent Receptor Plug Domain AM354_RS22040 PF00593 TonB dependent receptor AM354_RS22050 PF01594 AI-2E family transporter AM354_RS22055 PF00578 AhpC/TSA family AM354_RS22060 PF01842 ACT domain AM354_RS22065 PF00701 Dihydrodipicolinate synthetase family AM354_RS22070 PF06804 NlpB/DapX lipoprotein AM354_RS22075 PF01259 SAICAR synthetase AM354_RS22080 PF04228 Putative neutral zinc metallopeptidase AM354_RS22085 PF17176 tRNA-binding domain AM354_RS22085 PF13718 GNAT acetyltransferase 2 AM354_RS22085 PF08351 Domain of unknown function (DUF1726) AM354_RS22085 PF05127 Helicase AM354_RS22090 PF02230 Phospholipase/Carboxylesterase AM354_RS22095 PF13980 Uncharacterised protein family (UPF0370) AM354_RS22100 PF02557 D-alanyl-D-alanine carboxypeptidase AM354_RS22105 PF01546 Peptidase family M20/M25/M40 AM354_RS22105 PF07687 Peptidase dimerisation domain AM354_RS22110 PF03960 ArsC family AM354_RS22120 PF00583 Acetyltransferase (GNAT) family AM354_RS22130 PF00873 AcrB/AcrD/AcrF family AM354_RS22140 PF00072 Response regulator receiver domain AM354_RS22140 PF00196 Bacterial regulatory proteins, luxR family AM354_RS22145 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM354_RS22145 PF00672 HAMP domain AM354_RS22145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS22145 PF07730 Histidine kinase AM354_RS22155 PF00293 NUDIX domain AM354_RS22160 PF00456 Transketolase, thiamine diphosphate binding domain AM354_RS22160 PF02779 Transketolase, pyrimidine binding domain AM354_RS22160 PF02780 Transketolase, C-terminal domain AM354_RS22165 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM354_RS22170 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AM354_RS22170 PF18416 N-acetylglucosamine binding protein domain 2 AM354_RS22175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS22175 PF03466 LysR substrate binding domain AM354_RS22180 PF00704 Glycosyl hydrolases family 18 AM354_RS22200 PF03949 Malic enzyme, NAD binding domain AM354_RS22200 PF01515 Phosphate acetyl/butaryl transferase AM354_RS22200 PF00390 Malic enzyme, N-terminal domain AM354_RS22215 PF02574 Homocysteine S-methyltransferase AM354_RS22220 PF00324 Amino acid permease AM354_RS22235 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM354_RS22235 PF00326 Prolyl oligopeptidase family AM354_RS22240 PF07715 TonB-dependent Receptor Plug Domain AM354_RS22240 PF00593 TonB dependent receptor AM354_RS22245 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM354_RS22250 PF01218 Coproporphyrinogen III oxidase AM354_RS22255 PF01520 N-acetylmuramoyl-L-alanine amidase AM354_RS22260 PF00583 Acetyltransferase (GNAT) family AM354_RS22265 PF04076 Bacterial OB fold (BOF) protein AM354_RS22270 PF11143 Protein of unknown function (DUF2919) AM354_RS22275 PF06572 Protein of unknown function (DUF1131) AM354_RS22280 PF04261 Dyp-type peroxidase family AM354_RS22290 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS22295 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS22300 PF00005 ABC transporter AM354_RS22305 PF00291 Pyridoxal-phosphate dependent enzyme AM354_RS22310 PF00486 Transcriptional regulatory protein, C terminal AM354_RS22310 PF00072 Response regulator receiver domain AM354_RS22315 PF16527 Two-component sensor protein CpxA, periplasmic domain AM354_RS22315 PF00672 HAMP domain AM354_RS22315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS22315 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS22320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM354_RS22325 PF02896 PEP-utilising enzyme, TIM barrel domain AM354_RS22325 PF00391 PEP-utilising enzyme, mobile domain AM354_RS22325 PF05524 PEP-utilising enzyme, N-terminal AM354_RS22330 PF00381 PTS HPr component phosphorylation site AM354_RS22335 PF00291 Pyridoxal-phosphate dependent enzyme AM354_RS22345 PF04354 ZipA, C-terminal FtsZ-binding domain AM354_RS22355 PF03120 NAD-dependent DNA ligase OB-fold domain AM354_RS22355 PF01653 NAD-dependent DNA ligase adenylation domain AM354_RS22355 PF12826 Helix-hairpin-helix motif AM354_RS22355 PF00533 BRCA1 C Terminus (BRCT) domain AM354_RS22355 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM354_RS22360 PF12843 Putative quorum-sensing-regulated virulence factor AM354_RS22365 PF13593 SBF-like CPA transporter family (DUF4137) AM354_RS22370 PF03466 LysR substrate binding domain AM354_RS22370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS22385 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM354_RS22390 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM354_RS22395 PF03466 LysR substrate binding domain AM354_RS22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS22400 PF03306 Alpha-acetolactate decarboxylase AM354_RS22405 PF00205 Thiamine pyrophosphate enzyme, central domain AM354_RS22405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS22405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS22410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS22415 PF00593 TonB dependent receptor AM354_RS22415 PF07715 TonB-dependent Receptor Plug Domain AM354_RS22420 PF00756 Putative esterase AM354_RS22420 PF11806 Domain of unknown function (DUF3327) AM354_RS22425 PF00005 ABC transporter AM354_RS22430 PF01032 FecCD transport family AM354_RS22435 PF01032 FecCD transport family AM354_RS22440 PF01497 Periplasmic binding protein AM354_RS22470 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM354_RS22475 PF01226 Formate/nitrite transporter AM354_RS22495 PF00419 Fimbrial protein AM354_RS22500 PF13954 PapC N-terminal domain AM354_RS22500 PF13953 PapC C-terminal domain AM354_RS22500 PF00577 Outer membrane usher protein AM354_RS22505 PF02753 Pili assembly chaperone PapD, C-terminal domain AM354_RS22505 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM354_RS22510 PF00419 Fimbrial protein AM354_RS22520 PF07670 Nucleoside recognition AM354_RS22520 PF01773 Na+ dependent nucleoside transporter N-terminus AM354_RS22520 PF07662 Na+ dependent nucleoside transporter C-terminus AM354_RS22525 PF01566 Natural resistance-associated macrophage protein AM354_RS22530 PF10697 Protein of unknown function (DUF2502) AM354_RS22535 PF00248 Aldo/keto reductase family AM354_RS22540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS22540 PF00205 Thiamine pyrophosphate enzyme, central domain AM354_RS22540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS22545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS22545 PF03466 LysR substrate binding domain AM354_RS22555 PF01177 Asp/Glu/Hydantoin racemase AM354_RS22560 PF00654 Voltage gated chloride channel AM354_RS22565 PF02685 Glucokinase AM354_RS22570 PF07690 Major Facilitator Superfamily AM354_RS22575 PF10697 Protein of unknown function (DUF2502) AM354_RS22580 PF00072 Response regulator receiver domain AM354_RS22580 PF04397 LytTr DNA-binding domain AM354_RS22585 PF07694 5TMR of 5TMR-LYT AM354_RS22585 PF06580 Histidine kinase AM354_RS22585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS22590 PF07350 Protein of unknown function (DUF1479) AM354_RS22600 PF00155 Aminotransferase class I and II AM354_RS22605 PF01292 Prokaryotic cytochrome b561 AM354_RS22625 PF14883 Hypothetical glycosyl hydrolase family 13 AM354_RS22625 PF01522 Polysaccharide deacetylase AM354_RS22630 PF00535 Glycosyl transferase family 2 AM354_RS22645 PF13406 Transglycosylase SLT domain AM354_RS22665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS22665 PF03466 LysR substrate binding domain AM354_RS22675 PF00072 Response regulator receiver domain AM354_RS22675 PF00196 Bacterial regulatory proteins, luxR family AM354_RS22690 PF06445 GyrI-like small molecule binding domain AM354_RS22690 PF12833 Helix-turn-helix domain AM354_RS22695 PF10282 Lactonase, 7-bladed beta-propeller AM354_RS22705 PF01226 Formate/nitrite transporter AM354_RS22710 PF00005 ABC transporter AM354_RS22715 PF03379 CcmB protein AM354_RS22720 PF01578 Cytochrome C assembly protein AM354_RS22725 PF04995 Heme exporter protein D (CcmD) AM354_RS22730 PF03100 CcmE AM354_RS22735 PF01578 Cytochrome C assembly protein AM354_RS22735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM354_RS22740 PF08534 Redoxin AM354_RS22745 PF03918 Cytochrome C biogenesis protein AM354_RS22750 PF03918 Cytochrome C biogenesis protein AM354_RS22755 PF04333 MlaA lipoprotein AM354_RS22760 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM354_RS22765 PF04175 Protein of unknown function (DUF406) AM354_RS22770 PF02803 Thiolase, C-terminal domain AM354_RS22770 PF00108 Thiolase, N-terminal domain AM354_RS22775 PF00378 Enoyl-CoA hydratase/isomerase AM354_RS22775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM354_RS22775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM354_RS22780 PF00300 Histidine phosphatase superfamily (branch 1) AM354_RS22785 PF01713 Smr domain AM354_RS22790 PF05175 Methyltransferase small domain AM354_RS22795 PF01264 Chorismate synthase AM354_RS22800 PF03411 Penicillin-insensitive murein endopeptidase AM354_RS22805 PF01925 Sulfite exporter TauE/SafE AM354_RS22810 PF04315 Elongation factor P hydroxylase AM354_RS22815 PF08891 YfcL protein AM354_RS22820 PF01266 FAD dependent oxidoreductase AM354_RS22820 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM354_RS22825 PF02801 Beta-ketoacyl synthase, C-terminal domain AM354_RS22825 PF00109 Beta-ketoacyl synthase, N-terminal domain AM354_RS22835 PF02424 ApbE family AM354_RS22840 PF03600 Citrate transporter AM354_RS22845 PF07687 Peptidase dimerisation domain AM354_RS22845 PF01546 Peptidase family M20/M25/M40 AM354_RS22855 PF00155 Aminotransferase class I and II AM354_RS22855 PF00392 Bacterial regulatory proteins, gntR family AM354_RS22875 PF11412 Disulphide bond corrector protein DsbC AM354_RS22875 PF02683 Cytochrome C biogenesis protein transmembrane region AM354_RS22885 PF00578 AhpC/TSA family AM354_RS22890 PF00155 Aminotransferase class I and II AM354_RS22900 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS22905 PF01970 Tripartite tricarboxylate transporter TctA family AM354_RS22925 PF00486 Transcriptional regulatory protein, C terminal AM354_RS22925 PF00072 Response regulator receiver domain AM354_RS22930 PF08521 Two-component sensor kinase N-terminal AM354_RS22930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS22930 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS22935 PF00892 EamA-like transporter family AM354_RS22945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM354_RS22945 PF11890 Domain of unknown function (DUF3410) AM354_RS22945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM354_RS22950 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM354_RS22950 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM354_RS22955 PF01416 tRNA pseudouridine synthase AM354_RS22960 PF09335 SNARE associated Golgi protein AM354_RS22965 PF17848 Acetyl-coA carboxylase zinc finger domain AM354_RS22965 PF01039 Carboxyl transferase domain AM354_RS22970 PF08245 Mur ligase middle domain AM354_RS22970 PF02875 Mur ligase family, glutamate ligase domain AM354_RS22975 PF05036 Sporulation related domain AM354_RS22980 PF02674 Colicin V production protein AM354_RS22985 PF00156 Phosphoribosyl transferase domain AM354_RS22990 PF02441 Flavoprotein AM354_RS22995 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS23000 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS23005 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS23010 PF00005 ABC transporter AM354_RS23015 PF08338 Domain of unknown function (DUF1731) AM354_RS23015 PF01370 NAD dependent epimerase/dehydratase family AM354_RS23020 PF02152 Dihydroneopterin aldolase AM354_RS23025 PF00043 Glutathione S-transferase, C-terminal domain AM354_RS23025 PF02798 Glutathione S-transferase, N-terminal domain AM354_RS23030 PF12850 Calcineurin-like phosphoesterase superfamily domain AM354_RS23035 PF00293 NUDIX domain AM354_RS23040 PF00356 Bacterial regulatory proteins, lacI family AM354_RS23045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM354_RS23055 PF03611 PTS system sugar-specific permease component AM354_RS23060 PF00456 Transketolase, thiamine diphosphate binding domain AM354_RS23065 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM354_RS23065 PF02779 Transketolase, pyrimidine binding domain AM354_RS23065 PF02780 Transketolase, C-terminal domain AM354_RS23080 PF01515 Phosphate acetyl/butaryl transferase AM354_RS23080 PF07085 DRTGG domain AM354_RS23085 PF00871 Acetokinase family AM354_RS23090 PF04217 Protein of unknown function, DUF412 AM354_RS23095 PF03887 YfbU domain AM354_RS23100 PF13419 Haloacid dehalogenase-like hydrolase AM354_RS23105 PF03600 Citrate transporter AM354_RS23105 PF02080 TrkA-C domain AM354_RS23115 PF00155 Aminotransferase class I and II AM354_RS23120 PF03466 LysR substrate binding domain AM354_RS23120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS23125 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM354_RS23130 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM354_RS23135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM354_RS23135 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM354_RS23145 PF10531 SLBB domain AM354_RS23145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM354_RS23145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM354_RS23150 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM354_RS23150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM354_RS23150 PF00384 Molybdopterin oxidoreductase AM354_RS23150 PF01568 Molydopterin dinucleotide binding domain AM354_RS23155 PF00146 NADH dehydrogenase AM354_RS23160 PF12838 4Fe-4S dicluster domain AM354_RS23165 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM354_RS23170 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM354_RS23175 PF00361 Proton-conducting membrane transporter AM354_RS23175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM354_RS23180 PF00361 Proton-conducting membrane transporter AM354_RS23185 PF00361 Proton-conducting membrane transporter AM354_RS23190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS23190 PF03466 LysR substrate binding domain AM354_RS23200 PF06496 Protein of unknown function (DUF1097) AM354_RS23205 PF00356 Bacterial regulatory proteins, lacI family AM354_RS23210 PF00106 short chain dehydrogenase AM354_RS23215 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS23215 PF00107 Zinc-binding dehydrogenase AM354_RS23220 PF05957 Bacterial protein of unknown function (DUF883) AM354_RS23225 PF10091 Putative glucoamylase AM354_RS23225 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AM354_RS23225 PF06165 Glycosyltransferase family 36 AM354_RS23230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM354_RS23230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM354_RS23230 PF16582 Middle domain of thiamine pyrophosphate AM354_RS23235 PF12697 Alpha/beta hydrolase family AM354_RS23240 PF00378 Enoyl-CoA hydratase/isomerase AM354_RS23245 PF13378 Enolase C-terminal domain-like AM354_RS23250 PF13193 AMP-binding enzyme C-terminal domain AM354_RS23250 PF00501 AMP-binding enzyme AM354_RS23255 PF06628 Catalase-related immune-responsive AM354_RS23255 PF00199 Catalase AM354_RS23260 PF07437 YfaZ precursor AM354_RS23265 PF03222 Tryptophan/tyrosine permease family AM354_RS23270 PF00994 Probable molybdopterin binding domain AM354_RS23285 PF01848 Hok/gef family AM354_RS23290 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS23295 PF00268 Ribonucleotide reductase, small chain AM354_RS23300 PF03477 ATP cone domain AM354_RS23300 PF02867 Ribonucleotide reductase, barrel domain AM354_RS23300 PF00317 Ribonucleotide reductase, all-alpha domain AM354_RS23310 PF03989 DNA gyrase C-terminal domain, beta-propeller AM354_RS23310 PF00521 DNA gyrase/topoisomerase IV, subunit A AM354_RS23315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS23315 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS23315 PF00072 Response regulator receiver domain AM354_RS23315 PF09456 RcsC Alpha-Beta-Loop (ABL) AM354_RS23320 PF00196 Bacterial regulatory proteins, luxR family AM354_RS23320 PF00072 Response regulator receiver domain AM354_RS23325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS23325 PF16359 RcsD-ABL domain AM354_RS23325 PF01627 Hpt domain AM354_RS23330 PF07690 Major Facilitator Superfamily AM354_RS23335 PF13811 Domain of unknown function (DUF4186) AM354_RS23340 PF00267 Gram-negative porin AM354_RS23345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM354_RS23360 PF04355 SmpA / OmlA family AM354_RS23380 PF06530 Phage antitermination protein Q AM354_RS23465 PF06183 DinI-like family AM354_RS23470 PF00196 Bacterial regulatory proteins, luxR family AM354_RS23470 PF00072 Response regulator receiver domain AM354_RS23475 PF00512 His Kinase A (phospho-acceptor) domain AM354_RS23475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS23480 PF13247 4Fe-4S dicluster domain AM354_RS23485 PF03916 Polysulphide reductase, NrfD AM354_RS23490 PF01568 Molydopterin dinucleotide binding domain AM354_RS23490 PF00384 Molybdopterin oxidoreductase AM354_RS23490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM354_RS23500 PF11893 Domain of unknown function (DUF3413) AM354_RS23500 PF00884 Sulfatase AM354_RS23505 PF07208 Protein of unknown function (DUF1414) AM354_RS23510 PF04245 37-kD nucleoid-associated bacterial protein AM354_RS23515 PF01386 Ribosomal L25p family AM354_RS23520 PF00271 Helicase conserved C-terminal domain AM354_RS23520 PF04851 Type III restriction enzyme, res subunit AM354_RS23525 PF01479 S4 domain AM354_RS23525 PF00849 RNA pseudouridylate synthase AM354_RS23530 PF07690 Major Facilitator Superfamily AM354_RS23535 PF13989 YejG-like protein AM354_RS23540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM354_RS23540 PF00005 ABC transporter AM354_RS23545 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS23545 PF12911 N-terminal TM domain of oligopeptide transport permease C AM354_RS23550 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS23555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM354_RS23560 PF00563 EAL domain AM354_RS23560 PF12792 CSS motif domain associated with EAL AM354_RS23565 PF00877 NlpC/P60 family AM354_RS23575 PF01569 PAP2 superfamily AM354_RS23580 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM354_RS23580 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM354_RS23590 PF08125 Mannitol dehydrogenase C-terminal domain AM354_RS23590 PF01232 Mannitol dehydrogenase Rossmann domain AM354_RS23595 PF03786 D-mannonate dehydratase (UxuA) AM354_RS23600 PF09285 Elongation factor P, C-terminal AM354_RS23600 PF08207 Elongation factor P (EF-P) KOW-like domain AM354_RS23600 PF01132 Elongation factor P (EF-P) OB domain AM354_RS23605 PF03222 Tryptophan/tyrosine permease family AM354_RS23610 PF03692 Putative zinc- or iron-chelating domain AM354_RS23615 PF07690 Major Facilitator Superfamily AM354_RS23620 PF01568 Molydopterin dinucleotide binding domain AM354_RS23620 PF18364 Molybdopterin oxidoreductase N-terminal domain AM354_RS23620 PF00384 Molybdopterin oxidoreductase AM354_RS23625 PF03264 NapC/NirT cytochrome c family, N-terminal region AM354_RS23630 PF00293 NUDIX domain AM354_RS23640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM354_RS23640 PF00381 PTS HPr component phosphorylation site AM354_RS23645 PF00294 pfkB family carbohydrate kinase AM354_RS23650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM354_RS23650 PF02378 Phosphotransferase system, EIIC AM354_RS23655 PF01261 Xylose isomerase-like TIM barrel AM354_RS23660 PF03601 Conserved hypothetical protein 698 AM354_RS23670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS23670 PF03466 LysR substrate binding domain AM354_RS23675 PF00324 Amino acid permease AM354_RS23680 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS23685 PF01032 FecCD transport family AM354_RS23690 PF00005 ABC transporter AM354_RS23700 PF00593 TonB dependent receptor AM354_RS23700 PF07715 TonB-dependent Receptor Plug Domain AM354_RS23705 PF02653 Branched-chain amino acid transport system / permease component AM354_RS23710 PF00005 ABC transporter AM354_RS23715 PF07883 Cupin domain AM354_RS23715 PF01381 Helix-turn-helix AM354_RS23720 PF00120 Glutamine synthetase, catalytic domain AM354_RS23730 PF13520 Amino acid permease AM354_RS23735 PF00929 Exonuclease AM354_RS23735 PF08411 Exonuclease C-terminal AM354_RS23760 PF01510 N-acetylmuramoyl-L-alanine amidase AM354_RS23765 PF04632 Fusaric acid resistance protein family AM354_RS23770 PF04363 Protein of unknown function (DUF496) AM354_RS23775 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS23780 PF01546 Peptidase family M20/M25/M40 AM354_RS23780 PF07687 Peptidase dimerisation domain AM354_RS23785 PF03466 LysR substrate binding domain AM354_RS23785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS23790 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS23790 PF00107 Zinc-binding dehydrogenase AM354_RS23795 PF13407 Periplasmic binding protein domain AM354_RS23800 PF00005 ABC transporter AM354_RS23805 PF02653 Branched-chain amino acid transport system / permease component AM354_RS23810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM354_RS23810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM354_RS23815 PF01261 Xylose isomerase-like TIM barrel AM354_RS23820 PF00596 Class II Aldolase and Adducin N-terminal domain AM354_RS23825 PF00356 Bacterial regulatory proteins, lacI family AM354_RS23845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS23845 PF03466 LysR substrate binding domain AM354_RS23850 PF00144 Beta-lactamase AM354_RS23875 PF03739 Lipopolysaccharide export system permease LptF/LptG AM354_RS23880 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM354_RS23890 PF01943 Polysaccharide biosynthesis protein AM354_RS23910 PF00155 Aminotransferase class I and II AM354_RS23915 PF00550 Phosphopantetheine attachment site AM354_RS23920 PF00391 PEP-utilising enzyme, mobile domain AM354_RS23920 PF01370 NAD dependent epimerase/dehydratase family AM354_RS23925 PF00501 AMP-binding enzyme AM354_RS23935 PF01219 Prokaryotic diacylglycerol kinase AM354_RS23940 PF03466 LysR substrate binding domain AM354_RS23940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS23950 PF07690 Major Facilitator Superfamily AM354_RS23975 PF13458 Periplasmic binding protein AM354_RS23980 PF02653 Branched-chain amino acid transport system / permease component AM354_RS23985 PF02653 Branched-chain amino acid transport system / permease component AM354_RS23985 PF11862 Domain of unknown function (DUF3382) AM354_RS23990 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM354_RS23990 PF00005 ABC transporter AM354_RS23995 PF00005 ABC transporter AM354_RS24015 PF07690 Major Facilitator Superfamily AM354_RS24020 PF00083 Sugar (and other) transporter AM354_RS24025 PF00561 alpha/beta hydrolase fold AM354_RS24040 PF03060 Nitronate monooxygenase AM354_RS24050 PF11429 Colicin D AM354_RS24050 PF03515 Colicin-like bacteriocin tRNase domain AM354_RS24050 PF06958 S-type Pyocin AM354_RS24060 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM354_RS24060 PF00413 Matrixin AM354_RS24060 PF08548 Peptidase M10 serralysin C terminal AM354_RS24075 PF00141 Peroxidase AM354_RS24080 PF00171 Aldehyde dehydrogenase family AM354_RS24085 PF00561 alpha/beta hydrolase fold AM354_RS24090 PF00267 Gram-negative porin AM354_RS24095 PF01520 N-acetylmuramoyl-L-alanine amidase AM354_RS24100 PF07690 Major Facilitator Superfamily AM354_RS24115 PF01032 FecCD transport family AM354_RS24120 PF00005 ABC transporter AM354_RS24125 PF01965 DJ-1/PfpI family AM354_RS24130 PF03472 Autoinducer binding domain AM354_RS24130 PF00196 Bacterial regulatory proteins, luxR family AM354_RS24135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS24135 PF03466 LysR substrate binding domain AM354_RS24145 PF06719 AraC-type transcriptional regulator N-terminus AM354_RS24145 PF12833 Helix-turn-helix domain AM354_RS24150 PF00106 short chain dehydrogenase AM354_RS24160 PF00703 Glycosyl hydrolases family 2 AM354_RS24160 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM354_RS24160 PF02929 Beta galactosidase small chain AM354_RS24160 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM354_RS24160 PF16353 Domain of unknown function(DUF4981) AM354_RS24165 PF00072 Response regulator receiver domain AM354_RS24165 PF12431 Transcriptional regulator AM354_RS24170 PF08218 Citrate lyase ligase C-terminal domain AM354_RS24175 PF06857 Malonate decarboxylase delta subunit (MdcD) AM354_RS24180 PF03328 HpcH/HpaI aldolase/citrate lyase family AM354_RS24185 PF04223 Citrate lyase, alpha subunit (CitF) AM354_RS24190 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AM354_RS24195 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM354_RS24200 PF00939 Sodium:sulfate symporter transmembrane region AM354_RS24205 PF00328 Histidine phosphatase superfamily (branch 2) AM354_RS24225 PF00425 chorismate binding enzyme AM354_RS24235 PF00892 EamA-like transporter family AM354_RS24240 PF13532 2OG-Fe(II) oxygenase superfamily AM354_RS24245 PF03466 LysR substrate binding domain AM354_RS24245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS24250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM354_RS24250 PF02272 DHHA1 domain AM354_RS24250 PF01411 tRNA synthetases class II (A) AM354_RS24265 PF00999 Sodium/hydrogen exchanger family AM354_RS24270 PF12833 Helix-turn-helix domain AM354_RS24285 PF03466 LysR substrate binding domain AM354_RS24285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS24295 PF11115 Protein of unknown function (DUF2623) AM354_RS24300 PF08671 Anti-repressor SinI AM354_RS24300 PF01381 Helix-turn-helix AM354_RS24305 PF00583 Acetyltransferase (GNAT) family AM354_RS24310 PF04657 Putative inner membrane exporter, YdcZ AM354_RS24320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS24320 PF03466 LysR substrate binding domain AM354_RS24325 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM354_RS24325 PF01048 Phosphorylase superfamily AM354_RS24340 PF00248 Aldo/keto reductase family AM354_RS24350 PF03466 LysR substrate binding domain AM354_RS24350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS24355 PF09084 NMT1/THI5 like AM354_RS24360 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS24365 PF00005 ABC transporter AM354_RS24370 PF03070 TENA/THI-4/PQQC family AM354_RS24375 PF00296 Luciferase-like monooxygenase AM354_RS24385 PF12833 Helix-turn-helix domain AM354_RS24385 PF01965 DJ-1/PfpI family AM354_RS24390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM354_RS24390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM354_RS24400 PF06167 Glucose-regulated metallo-peptidase M90 AM354_RS24410 PF01011 PQQ enzyme repeat AM354_RS24415 PF07690 Major Facilitator Superfamily AM354_RS24420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM354_RS24420 PF01261 Xylose isomerase-like TIM barrel AM354_RS24425 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AM354_RS24425 PF00775 Dioxygenase AM354_RS24430 PF00775 Dioxygenase AM354_RS24435 PF03466 LysR substrate binding domain AM354_RS24435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS24440 PF12146 Serine aminopeptidase, S33 AM354_RS24445 PF00206 Lyase AM354_RS24445 PF10397 Adenylosuccinate lyase C-terminus AM354_RS24450 PF00108 Thiolase, N-terminal domain AM354_RS24450 PF02803 Thiolase, C-terminal domain AM354_RS24455 PF01144 Coenzyme A transferase AM354_RS24460 PF01144 Coenzyme A transferase AM354_RS24465 PF01614 Bacterial transcriptional regulator AM354_RS24465 PF09339 IclR helix-turn-helix domain AM354_RS24505 PF00419 Fimbrial protein AM354_RS24510 PF00419 Fimbrial protein AM354_RS24515 PF13953 PapC C-terminal domain AM354_RS24515 PF13954 PapC N-terminal domain AM354_RS24515 PF00577 Outer membrane usher protein AM354_RS24520 PF02753 Pili assembly chaperone PapD, C-terminal domain AM354_RS24520 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM354_RS24530 PF00419 Fimbrial protein AM354_RS24565 PF01011 PQQ enzyme repeat AM354_RS24570 PF07715 TonB-dependent Receptor Plug Domain AM354_RS24570 PF00593 TonB dependent receptor AM354_RS24575 PF00501 AMP-binding enzyme AM354_RS24575 PF00975 Thioesterase domain AM354_RS24575 PF13193 AMP-binding enzyme C-terminal domain AM354_RS24575 PF00550 Phosphopantetheine attachment site AM354_RS24575 PF00668 Condensation domain AM354_RS24580 PF00248 Aldo/keto reductase family AM354_RS24585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS24585 PF03466 LysR substrate binding domain AM354_RS24605 PF00171 Aldehyde dehydrogenase family AM354_RS24620 PF02798 Glutathione S-transferase, N-terminal domain AM354_RS24625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS24625 PF03466 LysR substrate binding domain AM354_RS24645 PF00324 Amino acid permease AM354_RS24650 PF00132 Bacterial transferase hexapeptide (six repeats) AM354_RS24655 PF08223 PaaX-like protein C-terminal domain AM354_RS24655 PF07848 PaaX-like protein AM354_RS24660 PF00501 AMP-binding enzyme AM354_RS24660 PF14535 AMP-binding enzyme C-terminal domain AM354_RS24665 PF02803 Thiolase, C-terminal domain AM354_RS24665 PF00108 Thiolase, N-terminal domain AM354_RS24670 PF03061 Thioesterase superfamily AM354_RS24675 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM354_RS24675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM354_RS24675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM354_RS24680 PF00378 Enoyl-CoA hydratase/isomerase AM354_RS24685 PF00378 Enoyl-CoA hydratase/isomerase AM354_RS24690 PF00175 Oxidoreductase NAD-binding domain AM354_RS24690 PF00970 Oxidoreductase FAD-binding domain AM354_RS24690 PF00111 2Fe-2S iron-sulfur cluster binding domain AM354_RS24695 PF01883 Iron-sulfur cluster assembly protein AM354_RS24700 PF05138 Phenylacetic acid catabolic protein AM354_RS24705 PF06243 Phenylacetic acid degradation B AM354_RS24710 PF05138 Phenylacetic acid catabolic protein AM354_RS24715 PF01575 MaoC like domain AM354_RS24715 PF00171 Aldehyde dehydrogenase family AM354_RS24725 PF00990 Diguanylate cyclase, GGDEF domain AM354_RS24725 PF01590 GAF domain AM354_RS24725 PF00563 EAL domain AM354_RS24725 PF00360 Phytochrome region AM354_RS24735 PF06983 3-demethylubiquinone-9 3-methyltransferase AM354_RS24740 PF03279 Bacterial lipid A biosynthesis acyltransferase AM354_RS24750 PF04226 Transglycosylase associated protein AM354_RS24755 PF06078 Bacterial protein of unknown function (DUF937) AM354_RS24760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS24760 PF03466 LysR substrate binding domain AM354_RS24770 PF16197 Ketoacyl-synthetase C-terminal extension AM354_RS24770 PF00107 Zinc-binding dehydrogenase AM354_RS24770 PF00550 Phosphopantetheine attachment site AM354_RS24770 PF08240 Alcohol dehydrogenase GroES-like domain AM354_RS24770 PF00698 Acyl transferase domain AM354_RS24770 PF08659 KR domain AM354_RS24770 PF00109 Beta-ketoacyl synthase, N-terminal domain AM354_RS24770 PF02801 Beta-ketoacyl synthase, C-terminal domain AM354_RS24770 PF14765 Polyketide synthase dehydratase AM354_RS24785 PF00313 'Cold-shock' DNA-binding domain AM354_RS24790 PF10781 Dextransucrase DSRB AM354_RS24795 PF00196 Bacterial regulatory proteins, luxR family AM354_RS24805 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM354_RS24810 PF03466 LysR substrate binding domain AM354_RS24810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS24815 PF02515 CoA-transferase family III AM354_RS24825 PF02308 MgtC family AM354_RS24830 PF00690 Cation transporter/ATPase, N-terminus AM354_RS24830 PF00689 Cation transporting ATPase, C-terminus AM354_RS24850 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM354_RS24855 PF01022 Bacterial regulatory protein, arsR family AM354_RS24860 PF02040 Arsenical pump membrane protein AM354_RS24865 PF03960 ArsC family AM354_RS24870 PF04261 Dyp-type peroxidase family AM354_RS24875 PF01062 Bestrophin, RFP-TM, chloride channel AM354_RS24880 PF02634 FdhD/NarQ family AM354_RS24910 PF00717 Peptidase S24-like AM354_RS24915 PF00593 TonB dependent receptor AM354_RS24915 PF07715 TonB-dependent Receptor Plug Domain AM354_RS24920 PF08281 Sigma-70, region 4 AM354_RS24920 PF04542 Sigma-70 region 2 AM354_RS24925 PF04773 FecR protein AM354_RS24925 PF16220 Domain of unknown function (DUF4880) AM354_RS24935 PF00817 impB/mucB/samB family AM354_RS24935 PF11798 IMS family HHH motif AM354_RS24935 PF11799 impB/mucB/samB family C-terminal domain AM354_RS24935 PF13438 Domain of unknown function (DUF4113) AM354_RS24940 PF01965 DJ-1/PfpI family AM354_RS24940 PF12833 Helix-turn-helix domain AM354_RS24945 PF00857 Isochorismatase family AM354_RS24950 PF01024 Colicin pore forming domain AM354_RS24960 PF00106 short chain dehydrogenase AM354_RS24965 PF07690 Major Facilitator Superfamily AM354_RS24970 PF00356 Bacterial regulatory proteins, lacI family AM354_RS24975 PF12833 Helix-turn-helix domain AM354_RS24975 PF12852 Cupin AM354_RS24980 PF04224 Protein of unknown function, DUF417 AM354_RS24985 PF03625 Domain of unknown function DUF302 AM354_RS24985 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM354_RS24990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM354_RS24990 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM354_RS24995 PF03301 Tryptophan 2,3-dioxygenase AM354_RS25000 PF06445 GyrI-like small molecule binding domain AM354_RS25005 PF04717 Type VI secretion system, phage-baseplate injector AM354_RS25015 PF00004 ATPase family associated with various cellular activities (AAA) AM354_RS25015 PF07724 AAA domain (Cdc48 subfamily) AM354_RS25015 PF17871 AAA lid domain AM354_RS25015 PF10431 C-terminal, D2-small domain, of ClpB protein AM354_RS25025 PF05947 Type VI secretion system, TssF AM354_RS25030 PF04965 Gene 25-like lysozyme AM354_RS25035 PF07024 ImpE protein AM354_RS25080 PF05638 Type VI secretion system effector, Hcp AM354_RS25095 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM354_RS25100 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM354_RS25115 PF06744 Type VI secretion protein IcmF C-terminal AM354_RS25115 PF14331 ImcF-related N-terminal domain AM354_RS25115 PF06761 Intracellular multiplication and human macrophage-killing AM354_RS25120 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM354_RS25120 PF00691 OmpA family AM354_RS25125 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AM354_RS25170 PF04717 Type VI secretion system, phage-baseplate injector AM354_RS25170 PF06715 Gp5 C-terminal repeat (3 copies) AM354_RS25185 PF16884 N-terminal domain of oxidoreductase AM354_RS25185 PF00107 Zinc-binding dehydrogenase AM354_RS25190 PF00582 Universal stress protein family AM354_RS25195 PF05321 Haemolysin expression modulating protein AM354_RS25210 PF05247 Flagellar transcriptional activator (FlhD) AM354_RS25215 PF05280 Flagellar transcriptional activator (FlhC) AM354_RS25220 PF01618 MotA/TolQ/ExbB proton channel family AM354_RS25225 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM354_RS25225 PF00691 OmpA family AM354_RS25230 PF09078 CheY binding AM354_RS25230 PF02895 Signal transducing histidine kinase, homodimeric domain AM354_RS25230 PF01584 CheW-like domain AM354_RS25230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS25230 PF01627 Hpt domain AM354_RS25235 PF01584 CheW-like domain AM354_RS25240 PF02203 Tar ligand binding domain homologue AM354_RS25240 PF00672 HAMP domain AM354_RS25240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM354_RS25245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM354_RS25245 PF00672 HAMP domain AM354_RS25245 PF02203 Tar ligand binding domain homologue AM354_RS25250 PF01739 CheR methyltransferase, SAM binding domain AM354_RS25250 PF03705 CheR methyltransferase, all-alpha domain AM354_RS25255 PF00072 Response regulator receiver domain AM354_RS25255 PF01339 CheB methylesterase AM354_RS25260 PF00072 Response regulator receiver domain AM354_RS25265 PF04344 Chemotaxis phosphatase, CheZ AM354_RS25270 PF01312 FlhB HrpN YscU SpaS Family AM354_RS25275 PF00771 FHIPEP family AM354_RS25285 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM354_RS25300 PF05130 FlgN protein AM354_RS25305 PF04316 Anti-sigma-28 factor, FlgM AM354_RS25310 PF13144 Chaperone for flagella basal body P-ring formation AM354_RS25310 PF17656 FlgA N-terminal domain AM354_RS25315 PF00460 Flagella basal body rod protein AM354_RS25320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM354_RS25320 PF00460 Flagella basal body rod protein AM354_RS25325 PF13861 FlgD Tudor-like domain AM354_RS25325 PF03963 Flagellar hook capping protein - N-terminal region AM354_RS25325 PF13860 FlgD Ig-like domain AM354_RS25330 PF07559 Flagellar basal body protein FlaE AM354_RS25330 PF00460 Flagella basal body rod protein AM354_RS25330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM354_RS25335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM354_RS25335 PF00460 Flagella basal body rod protein AM354_RS25340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM354_RS25340 PF00460 Flagella basal body rod protein AM354_RS25345 PF02107 Flagellar L-ring protein AM354_RS25350 PF02119 Flagellar P-ring protein AM354_RS25355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM354_RS25355 PF10135 Rod binding protein AM354_RS25365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM354_RS25365 PF00460 Flagella basal body rod protein AM354_RS25370 PF00669 Bacterial flagellin N-terminal helical region AM354_RS25385 PF01311 Bacterial export proteins, family 1 AM354_RS25390 PF01313 Bacterial export proteins, family 3 AM354_RS25395 PF00813 FliP family AM354_RS25400 PF04347 Flagellar biosynthesis protein, FliO AM354_RS25405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM354_RS25405 PF16973 Flagellar motor switch protein FliN N-terminal AM354_RS25410 PF02154 Flagellar motor switch protein FliM AM354_RS25410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM354_RS25415 PF03748 Flagellar basal body-associated protein FliL AM354_RS25420 PF02120 Flagellar hook-length control protein FliK AM354_RS25425 PF02050 Flagellar FliJ protein AM354_RS25430 PF18269 T3SS EscN ATPase C-terminal domain AM354_RS25430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM354_RS25435 PF02108 Flagellar assembly protein FliH AM354_RS25440 PF01706 FliG C-terminal domain AM354_RS25440 PF14842 FliG N-terminal domain AM354_RS25440 PF14841 FliG middle domain AM354_RS25445 PF01514 Secretory protein of YscJ/FliF family AM354_RS25445 PF08345 Flagellar M-ring protein C-terminal AM354_RS25450 PF02049 Flagellar hook-basal body complex protein FliE AM354_RS25460 PF02525 Flavodoxin-like fold AM354_RS25465 PF03466 LysR substrate binding domain AM354_RS25465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS25475 PF05400 Flagellar protein FliT AM354_RS25480 PF02561 Flagellar protein FliS AM354_RS25485 PF07195 Flagellar hook-associated protein 2 C-terminus AM354_RS25485 PF02465 Flagellar hook-associated protein 2 N-terminus AM354_RS25485 PF07196 Flagellin hook IN motif AM354_RS25495 PF00700 Bacterial flagellin C-terminal helical region AM354_RS25495 PF00669 Bacterial flagellin N-terminal helical region AM354_RS25500 PF04539 Sigma-70 region 3 AM354_RS25500 PF04542 Sigma-70 region 2 AM354_RS25500 PF04545 Sigma-70, region 4 AM354_RS25505 PF02899 Phage integrase, N-terminal SAM-like domain AM354_RS25510 PF00291 Pyridoxal-phosphate dependent enzyme AM354_RS25515 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM354_RS25520 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS25525 PF00005 ABC transporter AM354_RS25530 PF14850 DNA-binding domain of Proline dehydrogenase AM354_RS25530 PF00171 Aldehyde dehydrogenase family AM354_RS25530 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM354_RS25530 PF01619 Proline dehydrogenase AM354_RS25535 PF00474 Sodium:solute symporter family AM354_RS25540 PF03239 Iron permease FTR1 family AM354_RS25545 PF13473 Cupredoxin-like domain AM354_RS25545 PF09375 Imelysin AM354_RS25550 PF04261 Dyp-type peroxidase family AM354_RS25555 PF02562 PhoH-like protein AM354_RS25565 PF01699 Sodium/calcium exchanger protein AM354_RS25570 PF08021 Siderophore-interacting FAD-binding domain AM354_RS25570 PF04954 Siderophore-interacting protein AM354_RS25575 PF06150 ChaB AM354_RS25580 PF04752 ChaC-like protein AM354_RS25585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM354_RS25585 PF03466 LysR substrate binding domain AM354_RS25605 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS25610 PF12911 N-terminal TM domain of oligopeptide transport permease C AM354_RS25610 PF00528 Binding-protein-dependent transport system inner membrane component AM354_RS25615 PF00005 ABC transporter AM354_RS25615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM354_RS25620 PF00005 ABC transporter AM354_RS25620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM354_RS25635 PF11924 Inverse autotransporter, beta-domain AM354_RS25640 PF00196 Bacterial regulatory proteins, luxR family AM354_RS25640 PF00072 Response regulator receiver domain AM354_RS25645 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM354_RS25645 PF00672 HAMP domain AM354_RS25645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM354_RS25645 PF07730 Histidine kinase AM354_RS25650 PF07690 Major Facilitator Superfamily AM354_RS25655 PF00486 Transcriptional regulatory protein, C terminal AM354_RS25655 PF18500 CadC C-terminal domain 1 AM354_RS25660 PF01370 NAD dependent epimerase/dehydratase family AM354_RS25665 PF00953 Glycosyl transferase family 4 AM354_RS25670 PF10531 SLBB domain AM354_RS25670 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM354_RS25670 PF02563 Polysaccharide biosynthesis/export protein AM354_RS25675 PF13807 G-rich domain on putative tyrosine kinase AM354_RS25675 PF02706 Chain length determinant protein AM354_RS25675 PF13614 AAA domain AM354_RS25695 PF00535 Glycosyl transferase family 2 AM354_RS25700 PF00534 Glycosyl transferases group 1 AM354_RS25705 PF00535 Glycosyl transferase family 2 AM354_RS25715 PF14710 Respiratory nitrate reductase alpha N-terminal AM354_RS25715 PF00384 Molybdopterin oxidoreductase AM354_RS25715 PF01568 Molydopterin dinucleotide binding domain AM354_RS25720 PF14711 Respiratory nitrate reductase beta C-terminal AM354_RS25720 PF13247 4Fe-4S dicluster domain AM354_RS25725 PF02613 Nitrate reductase delta subunit AM354_RS25730 PF02665 Nitrate reductase gamma subunit AM354_RS25735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM354_RS25735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM354_RS25740 PF01370 NAD dependent epimerase/dehydratase family AM354_RS25790 PF02322 Cytochrome bd terminal oxidase subunit II AM354_RS25795 PF01654 Cytochrome bd terminal oxidase subunit I AM354_RS25800 PF00392 Bacterial regulatory proteins, gntR family AM354_RS25800 PF00155 Aminotransferase class I and II AM354_RS25805 PF07859 alpha/beta hydrolase fold AM354_RS25810 PF00202 Aminotransferase class-III AM354_RS25815 PF04958 Arginine N-succinyltransferase beta subunit AM354_RS25820 PF00171 Aldehyde dehydrogenase family AM354_RS25825 PF04996 Succinylarginine dihydrolase AM354_RS25830 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM354_RS25835 PF00267 Gram-negative porin AM354_RS25850 PF07358 Protein of unknown function (DUF1482) AM354_RS25855 PF01476 LysM domain AM354_RS25855 PF04972 BON domain AM354_RS25860 PF05726 Pirin C-terminal cupin domain AM354_RS25860 PF02678 Pirin AM354_RS25870 PF12833 Helix-turn-helix domain AM354_RS25875 PF13993 YccJ-like protein AM354_RS25880 PF10964 Protein of unknown function (DUF2766) AM354_RS25885 PF13996 YobH-like protein AM354_RS25895 PF13974 YebO-like protein AM354_RS25900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM354_RS25915 PF00324 Amino acid permease AM354_RS25925 PF12706 Beta-lactamase superfamily domain AM354_RS25930 PF10736 Protein of unknown function (DUF2627) AM354_RS25935 PF00313 'Cold-shock' DNA-binding domain AM354_RS25940 PF02578 Multi-copper polyphenol oxidoreductase laccase AM354_RS25945 PF13847 Methyltransferase domain AM354_RS25950 PF02659 Putative manganese efflux pump AM354_RS25955 PF06173 Protein of unknown function (DUF986) AM354_RS25960 PF03613 PTS system mannose/fructose/sorbose family IID component AM354_RS25965 PF03609 PTS system sorbose-specific iic component AM354_RS25970 PF03610 PTS system fructose IIA component AM354_RS25970 PF03830 PTS system sorbose subfamily IIB component AM354_RS25975 PF03471 Transporter associated domain AM354_RS25975 PF03741 Integral membrane protein TerC family AM354_RS25980 PF12792 CSS motif domain associated with EAL AM354_RS25980 PF00563 EAL domain AM354_RS25985 PF03313 Serine dehydratase alpha chain AM354_RS25985 PF03315 Serine dehydratase beta chain AM354_RS25990 PF00293 NUDIX domain AM354_RS25995 PF00425 chorismate binding enzyme AM354_RS25995 PF04715 Anthranilate synthase component I, N terminal region AM354_RS26000 PF00535 Glycosyl transferase family 2 AM354_RS26005 PF03701 Uncharacterised protein family (UPF0181) AM354_RS26010 PF02222 ATP-grasp domain AM354_RS26015 PF00313 'Cold-shock' DNA-binding domain AM354_RS26020 PF03880 DbpA RNA binding domain AM354_RS26020 PF00270 DEAD/DEAH box helicase AM354_RS26020 PF00271 Helicase conserved C-terminal domain AM354_RS26025 PF07130 YebG protein AM354_RS26030 PF04266 ASCH domain AM354_RS26035 PF13995 YebF-like protein AM354_RS26040 PF07273 Protein of unknown function (DUF1439) AM354_RS26045 PF03109 ABC1 family AM354_RS26050 PF13417 Glutathione S-transferase, N-terminal domain AM354_RS26050 PF04399 Glutaredoxin 2, C terminal domain AM354_RS26060 PF07690 Major Facilitator Superfamily AM354_RS26065 PF13302 Acetyltransferase (GNAT) domain AM354_RS26070 PF04337 Protein of unknown function, DUF480 AM354_RS26075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM354_RS26080 PF03023 Lipid II flippase MurJ AM354_RS26085 PF05746 DALR anticodon binding domain AM354_RS26085 PF00750 tRNA synthetases class I (R) AM354_RS26085 PF03485 Arginyl tRNA synthetase N terminal domain AM354_RS26090 PF06185 YecM protein AM354_RS26095 PF00155 Aminotransferase class I and II AM354_RS26100 PF03932 CutC family AM354_RS26120 PF01526 Tn3 transposase DDE domain AM354_RS26120 PF13700 Domain of unknown function (DUF4158) AM354_RS26130 PF03852 DNA mismatch endonuclease Vsr AM354_RS26140 PF01381 Helix-turn-helix AM354_RS26140 PF00145 C-5 cytosine-specific DNA methylase AM354_RS26165 PF02796 Helix-turn-helix domain of resolvase AM354_RS26165 PF00239 Resolvase, N terminal domain AM354_RS26170 PF02796 Helix-turn-helix domain of resolvase AM354_RS26170 PF00239 Resolvase, N terminal domain AM354_RS26180 PF13614 AAA domain AM354_RS26180 PF00376 MerR family regulatory protein AM354_RS26195 PF11740 Plasmid replication region DNA-binding N-term AM354_RS26200 PF00565 Staphylococcal nuclease homologue AM354_RS26210 PF02534 Type IV secretory system Conjugative DNA transfer AM354_RS26220 PF07820 TraC-like protein AM354_RS26225 PF01443 Viral (Superfamily 1) RNA helicase AM354_RS26225 PF17841 BID domain of Bartonella effector protein (Bep) AM354_RS26225 PF03389 MobA/MobL family