AM354_RS00035 SM00834 Putative regulatory protein AM354_RS00060 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM354_RS00065 SM00382 ATPases associated with a variety of cellular activities AM354_RS00075 SM00382 ATPases associated with a variety of cellular activities AM354_RS00085 SM00257 Lysin motif AM354_RS00095 SM00364 Leucine-rich repeats, bacterial type AM354_RS00095 SM00369 Leucine-rich repeats, typical (most populated) subfamily AM354_RS00135 SM00487 DEAD-like helicases superfamily AM354_RS00135 SM00491 AM354_RS00135 AM354_RS00155 SM00341 Helicase and RNase D C-terminal AM354_RS00155 SM00474 3'-5' exonuclease AM354_RS00205 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS00230 SM01005 Alanine racemase, C-terminal domain AM354_RS00285 SM00763 PrkA AAA domain AM354_RS00300 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM354_RS00315 SM00636 AM354_RS00315 AM354_RS00325 SM00870 AM354_RS00325 AM354_RS00345 SM00450 Rhodanese Homology Domain AM354_RS00350 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AM354_RS00350 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AM354_RS00350 SM00493 AM354_RS00350 AM354_RS00410 SM00448 cheY-homologous receiver domain AM354_RS00420 SM00984 UDP binding domain AM354_RS00430 SM00528 Domain in histone-like proteins of HNS family AM354_RS00470 SM00382 ATPases associated with a variety of cellular activities AM354_RS00475 SM00382 ATPases associated with a variety of cellular activities AM354_RS00485 SM00155 Phospholipase D. Active site motifs. AM354_RS00520 SM00382 ATPases associated with a variety of cellular activities AM354_RS00530 SM00829 Enoylreductase AM354_RS00540 SM00354 helix_turn _helix lactose operon repressor AM354_RS00570 SM00487 DEAD-like helicases superfamily AM354_RS00580 SM00990 AM354_RS00580 AM354_RS00585 SM00482 DNA polymerase A domain AM354_RS00635 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS00815 SM00749 bacterial OsmY and nodulation domain AM354_RS00850 SM00481 DNA polymerase alpha chain like domain AM354_RS00870 SM00363 S4 RNA-binding domain AM354_RS00880 SM00822 AM354_RS00880 AM354_RS00895 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AM354_RS00895 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AM354_RS00895 SM00493 AM354_RS00895 AM354_RS00915 SM00014 Acid phosphatase homologues AM354_RS00920 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS00920 SM01134 AM354_RS00920 AM354_RS00930 SM00861 Transketolase, pyrimidine binding domain AM354_RS00950 SM00382 ATPases associated with a variety of cellular activities AM354_RS00965 SM00822 AM354_RS00965 AM354_RS00975 SM00028 Tetratricopeptide repeats AM354_RS00990 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AM354_RS01005 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS01005 SM01134 AM354_RS01005 AM354_RS01125 SM00357 Cold shock protein domain AM354_RS01125 SM00955 AM354_RS01125 AM354_RS01145 SM00936 Penicillin-binding protein 5, C-terminal domain AM354_RS01170 SM00382 ATPases associated with a variety of cellular activities AM354_RS01175 SM00382 ATPases associated with a variety of cellular activities AM354_RS01205 SM00833 Cobalamin synthesis protein cobW C-terminal domain AM354_RS01220 SM00382 ATPases associated with a variety of cellular activities AM354_RS01255 SM00091 PAS domain AM354_RS01255 SM00382 ATPases associated with a variety of cellular activities AM354_RS01265 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM354_RS01315 SM00890 Domain of unknown function AM354_RS01370 SM00382 ATPases associated with a variety of cellular activities AM354_RS01370 SM00487 DEAD-like helicases superfamily AM354_RS01370 SM00490 helicase superfamily c-terminal domain AM354_RS01370 SM00847 Helicase associated domain (HA2) Add an annotation AM354_RS01390 SM00020 Trypsin-like serine protease AM354_RS01410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS01410 SM00387 Histidine kinase-like ATPases AM354_RS01410 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS01415 SM00448 cheY-homologous receiver domain AM354_RS01415 SM00862 Transcriptional regulatory protein, C terminal AM354_RS01450 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AM354_RS01450 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AM354_RS01465 SM00100 Cyclic nucleotide-monophosphate binding domain AM354_RS01465 SM00419 helix_turn_helix, cAMP Regulatory protein AM354_RS01490 SM00563 Phosphate acyltransferases AM354_RS01520 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS01560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS01580 SM00382 ATPases associated with a variety of cellular activities AM354_RS01585 SM00382 ATPases associated with a variety of cellular activities AM354_RS01645 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS01655 SM00838 Elongation factor G C-terminus AM354_RS01655 SM00889 Elongation factor G, domain IV AM354_RS01670 SM00382 ATPases associated with a variety of cellular activities AM354_RS01730 SM00382 ATPases associated with a variety of cellular activities AM354_RS01745 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS01760 SM01130 AM354_RS01760 AM354_RS01775 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS01775 SM00895 AM354_RS01775 AM354_RS01790 SM00267 diguanylate cyclase AM354_RS01835 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM354_RS01855 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS01890 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS01890 SM01134 AM354_RS01890 AM354_RS01945 SM00422 helix_turn_helix, mercury resistance AM354_RS01980 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM354_RS02000 SM00923 MbtH-like protein AM354_RS02005 SM00823 Phosphopantetheine attachment site AM354_RS02005 SM00824 Thioesterase AM354_RS02075 SM00354 helix_turn _helix lactose operon repressor AM354_RS02100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM354_RS02110 SM00382 ATPases associated with a variety of cellular activities AM354_RS02125 SM01012 AM354_RS02125 AM354_RS02130 SM00155 Phospholipase D. Active site motifs. AM354_RS02135 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS02150 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS02155 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM354_RS02155 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AM354_RS02155 SM00091 PAS domain AM354_RS02155 SM00267 diguanylate cyclase AM354_RS02160 SM00422 helix_turn_helix, mercury resistance AM354_RS02210 SM00729 Elongator protein 3, MiaB family, Radical SAM AM354_RS02235 SM00903 Flavin reductase like domain AM354_RS02250 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS02250 SM00895 AM354_RS02250 AM354_RS02265 SM00235 Zinc-dependent metalloprotease AM354_RS02270 SM00052 Putative diguanylate phosphodiesterase AM354_RS02270 SM00267 diguanylate cyclase AM354_RS02280 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS02285 SM00382 ATPases associated with a variety of cellular activities AM354_RS02295 SM00829 Enoylreductase AM354_RS02300 SM00849 Metallo-beta-lactamase superfamily AM354_RS02360 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS02360 SM01134 AM354_RS02360 AM354_RS02405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM354_RS02405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS02405 SM00319 Homologues of the ligand binding domain of Tar AM354_RS02435 SM00347 helix_turn_helix multiple antibiotic resistance protein AM354_RS02460 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS02515 SM00235 Zinc-dependent metalloprotease AM354_RS02540 SM00835 Cupin AM354_RS02555 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM354_RS02570 SM00382 ATPases associated with a variety of cellular activities AM354_RS02610 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM354_RS02620 SM00347 helix_turn_helix multiple antibiotic resistance protein AM354_RS02680 SM00965 Secretin and TonB N terminus short domain AM354_RS02730 SM00116 Domain in cystathionine beta-synthase and other proteins. AM354_RS02730 SM00382 ATPases associated with a variety of cellular activities AM354_RS02740 SM00422 helix_turn_helix, mercury resistance AM354_RS02835 SM00354 helix_turn _helix lactose operon repressor AM354_RS02860 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS02860 SM01134 AM354_RS02860 AM354_RS02905 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS02915 SM00900 AM354_RS02915 AM354_RS02925 SM00478 endonuclease III AM354_RS02925 SM00525 AM354_RS02925 AM354_RS02940 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS02980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM354_RS02990 SM01130 AM354_RS02990 AM354_RS03005 SM00363 S4 RNA-binding domain AM354_RS03030 SM00347 helix_turn_helix multiple antibiotic resistance protein AM354_RS03100 SM00479 AM354_RS03100 AM354_RS03125 SM00354 helix_turn _helix lactose operon repressor AM354_RS03210 SM00382 ATPases associated with a variety of cellular activities AM354_RS03300 SM00382 ATPases associated with a variety of cellular activities AM354_RS03310 SM00052 Putative diguanylate phosphodiesterase AM354_RS03360 SM00382 ATPases associated with a variety of cellular activities AM354_RS03380 SM00411 bacterial (prokaryotic) histone like domain AM354_RS03385 SM00873 B3/4 domain AM354_RS03385 SM00874 tRNA synthetase B5 domain AM354_RS03385 SM00896 Ferredoxin-fold anticodon binding domain AM354_RS03410 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AM354_RS03470 SM00382 ATPases associated with a variety of cellular activities AM354_RS03525 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS03525 SM00866 AM354_RS03525 AM354_RS03535 SM00382 ATPases associated with a variety of cellular activities AM354_RS03550 SM00346 helix_turn_helix isocitrate lyase regulation AM354_RS03565 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM354_RS03565 SM00245 tail specific protease AM354_RS03570 SM00945 ProQ/FINO family AM354_RS03575 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM354_RS03595 SM00972 Spore Coat Protein U domain AM354_RS03600 SM00972 Spore Coat Protein U domain AM354_RS03605 SM00972 Spore Coat Protein U domain AM354_RS03620 SM00972 Spore Coat Protein U domain AM354_RS03635 SM01022 AM354_RS03635 AM354_RS03670 SM00640 Glycosyl hydrolases family 32 AM354_RS03675 SM00354 helix_turn _helix lactose operon repressor AM354_RS03690 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS03690 SM00866 AM354_RS03690 AM354_RS03710 SM00830 Chorismate mutase type II AM354_RS03750 SM01230 AM354_RS03750 AM354_RS03760 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS03795 SM00357 Cold shock protein domain AM354_RS04015 SM00974 AM354_RS04015 AM354_RS04045 SM00507 HNH nucleases AM354_RS04050 SM01252 AM354_RS04050 AM354_RS04090 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS04150 SM01329 AM354_RS04150 AM354_RS04200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS04205 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS04205 SM00866 AM354_RS04205 AM354_RS04215 SM00448 cheY-homologous receiver domain AM354_RS04215 SM00862 Transcriptional regulatory protein, C terminal AM354_RS04220 SM00387 Histidine kinase-like ATPases AM354_RS04220 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS04225 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AM354_RS04240 SM00382 ATPases associated with a variety of cellular activities AM354_RS04290 SM00382 ATPases associated with a variety of cellular activities AM354_RS04305 SM00487 DEAD-like helicases superfamily AM354_RS04305 SM00490 helicase superfamily c-terminal domain AM354_RS04305 SM00982 AM354_RS04305 AM354_RS04305 SM01058 CarD-like/TRCF domain AM354_RS04340 SM00937 AM354_RS04340 AM354_RS04360 SM01400 AM354_RS04360 AM354_RS04395 SM00822 AM354_RS04395 AM354_RS04395 SM00823 Phosphopantetheine attachment site AM354_RS04395 SM00825 Beta-ketoacyl synthase AM354_RS04410 SM00822 AM354_RS04410 AM354_RS04435 SM00984 UDP binding domain AM354_RS04455 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS04470 SM01038 Beta galactosidase small chain AM354_RS04475 SM00354 helix_turn _helix lactose operon repressor AM354_RS04515 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS04515 SM00895 AM354_RS04515 AM354_RS04540 SM00382 ATPases associated with a variety of cellular activities AM354_RS04550 SM01133 AM354_RS04550 AM354_RS04555 SM00387 Histidine kinase-like ATPases AM354_RS04560 SM00448 cheY-homologous receiver domain AM354_RS04635 SM00479 AM354_RS04635 AM354_RS04655 SM00481 DNA polymerase alpha chain like domain AM354_RS04695 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS04755 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS04765 SM00822 AM354_RS04765 AM354_RS04775 SM00529 Helix-turn-helix diphteria tox regulatory element AM354_RS04815 SM00825 Beta-ketoacyl synthase AM354_RS04825 SM00822 AM354_RS04825 AM354_RS04830 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AM354_RS04860 SM00363 S4 RNA-binding domain AM354_RS04870 SM00316 Ribosomal protein S1-like RNA-binding domain AM354_RS04905 SM00421 helix_turn_helix, Lux Regulon AM354_RS04915 SM00829 Enoylreductase AM354_RS04930 SM00867 YceI-like domain AM354_RS04935 SM00450 Rhodanese Homology Domain AM354_RS04980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS04985 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS04990 SM00917 LeuA allosteric (dimerisation) domain AM354_RS05030 SM01091 Transporter associated domain AM354_RS05050 SM00465 GIY-YIG type nucleases (URI domain) AM354_RS05060 SM00382 ATPases associated with a variety of cellular activities AM354_RS05125 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM354_RS05125 SM00465 GIY-YIG type nucleases (URI domain) AM354_RS05130 SM00421 helix_turn_helix, Lux Regulon AM354_RS05130 SM00448 cheY-homologous receiver domain AM354_RS05175 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS05180 SM01130 AM354_RS05180 AM354_RS05210 SM00421 helix_turn_helix, Lux Regulon AM354_RS05280 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS05300 SM00477 DNA/RNA non-specific endonuclease AM354_RS05300 SM00892 DNA/RNA non-specific endonuclease AM354_RS05320 SM00422 helix_turn_helix, mercury resistance AM354_RS05355 SM00421 helix_turn_helix, Lux Regulon AM354_RS05360 SM00862 Transcriptional regulatory protein, C terminal AM354_RS05395 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AM354_RS05400 SM00992 Hemimethylated DNA-binding protein YccV like AM354_RS05405 SM00881 CoA binding domain AM354_RS05415 SM00851 MGS-like domain AM354_RS05470 SM00825 Beta-ketoacyl synthase AM354_RS05495 SM00382 ATPases associated with a variety of cellular activities AM354_RS05500 SM00981 AM354_RS05500 AM354_RS05525 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS05540 SM00382 ATPases associated with a variety of cellular activities AM354_RS05550 SM00267 diguanylate cyclase AM354_RS05575 SM00849 Metallo-beta-lactamase superfamily AM354_RS05635 SM00357 Cold shock protein domain AM354_RS05640 SM00357 Cold shock protein domain AM354_RS05645 SM01150 AM354_RS05645 AM354_RS05655 SM00382 ATPases associated with a variety of cellular activities AM354_RS05660 SM00849 Metallo-beta-lactamase superfamily AM354_RS05665 SM00411 bacterial (prokaryotic) histone like domain AM354_RS05670 SM00316 Ribosomal protein S1-like RNA-binding domain AM354_RS05690 SM00870 AM354_RS05690 AM354_RS05730 SM00382 ATPases associated with a variety of cellular activities AM354_RS05740 SM00843 AM354_RS05740 AM354_RS05745 SM00344 helix_turn_helix ASNC type AM354_RS05755 SM00382 ATPases associated with a variety of cellular activities AM354_RS05760 SM00382 ATPases associated with a variety of cellular activities AM354_RS05770 SM00316 Ribosomal protein S1-like RNA-binding domain AM354_RS05775 SM00382 ATPases associated with a variety of cellular activities AM354_RS05775 SM01086 C-terminal, D2-small domain, of ClpB protein AM354_RS05785 SM00357 Cold shock protein domain AM354_RS05790 SM00382 ATPases associated with a variety of cellular activities AM354_RS05865 SM00644 AM354_RS05865 AM354_RS05880 SM00382 ATPases associated with a variety of cellular activities AM354_RS05885 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS05885 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AM354_RS05900 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS05900 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AM354_RS05925 SM00382 ATPases associated with a variety of cellular activities AM354_RS06010 SM00014 Acid phosphatase homologues AM354_RS06020 SM01133 AM354_RS06020 AM354_RS06025 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS06025 SM01134 AM354_RS06025 AM354_RS06040 SM00421 helix_turn_helix, Lux Regulon AM354_RS06100 SM00936 Penicillin-binding protein 5, C-terminal domain AM354_RS06105 SM00116 Domain in cystathionine beta-synthase and other proteins. AM354_RS06215 SM01350 AM354_RS06215 AM354_RS06240 SM00382 ATPases associated with a variety of cellular activities AM354_RS06285 SM00382 ATPases associated with a variety of cellular activities AM354_RS06340 SM00226 Low molecular weight phosphatase family AM354_RS06360 SM00116 Domain in cystathionine beta-synthase and other proteins. AM354_RS06360 SM01091 Transporter associated domain AM354_RS06385 SM00014 Acid phosphatase homologues AM354_RS06425 SM00919 Malic enzyme, NAD binding domain AM354_RS06425 SM01274 AM354_RS06425 AM354_RS06440 SM00382 ATPases associated with a variety of cellular activities AM354_RS06450 SM00354 helix_turn _helix lactose operon repressor AM354_RS06475 SM00829 Enoylreductase AM354_RS06500 SM00382 ATPases associated with a variety of cellular activities AM354_RS06515 SM00852 Probable molybdopterin binding domain AM354_RS06525 SM00382 ATPases associated with a variety of cellular activities AM354_RS06540 SM00947 Carbonic anhydrase AM354_RS06545 SM01116 AM354_RS06545 AM354_RS06575 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS06585 SM00098 Alkaline phosphatase homologues AM354_RS06595 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS06620 SM00052 Putative diguanylate phosphodiesterase AM354_RS06625 SM00421 helix_turn_helix, Lux Regulon AM354_RS06675 SM00448 cheY-homologous receiver domain AM354_RS06675 SM00862 Transcriptional regulatory protein, C terminal AM354_RS06680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS06680 SM00387 Histidine kinase-like ATPases AM354_RS06680 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS06710 SM00421 helix_turn_helix, Lux Regulon AM354_RS06715 SM00862 Transcriptional regulatory protein, C terminal AM354_RS06720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS06720 SM00387 Histidine kinase-like ATPases AM354_RS06720 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS06725 SM00448 cheY-homologous receiver domain AM354_RS06725 SM00862 Transcriptional regulatory protein, C terminal AM354_RS06750 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS06750 SM01134 AM354_RS06750 AM354_RS06765 SM01007 Class II Aldolase and Adducin N-terminal domain AM354_RS06825 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS06825 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AM354_RS06835 SM00382 ATPases associated with a variety of cellular activities AM354_RS06845 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AM354_RS06845 SM00091 PAS domain AM354_RS06845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM354_RS06855 SM00903 Flavin reductase like domain AM354_RS06865 SM00947 Carbonic anhydrase AM354_RS06890 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS06915 SM00382 ATPases associated with a variety of cellular activities AM354_RS06925 SM00344 helix_turn_helix ASNC type AM354_RS06930 SM00487 DEAD-like helicases superfamily AM354_RS06930 SM00488 AM354_RS06930 AM354_RS06930 SM00491 AM354_RS06930 AM354_RS06970 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS07020 SM00382 ATPases associated with a variety of cellular activities AM354_RS07080 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS07090 SM00450 Rhodanese Homology Domain AM354_RS07130 SM00382 ATPases associated with a variety of cellular activities AM354_RS07155 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS07155 SM00895 AM354_RS07155 AM354_RS07160 SM00796 Allophanate hydrolase subunit 1 AM354_RS07160 SM00797 Allophanate hydrolase subunit 2 AM354_RS07160 SM00878 Biotin carboxylase C-terminal domain AM354_RS07170 SM01276 AM354_RS07170 AM354_RS07195 SM00382 ATPases associated with a variety of cellular activities AM354_RS07230 SM00382 ATPases associated with a variety of cellular activities AM354_RS07230 SM00930 AM354_RS07230 AM354_RS07270 SM00347 helix_turn_helix multiple antibiotic resistance protein AM354_RS07290 SM00642 Alpha-amylase domain AM354_RS07295 SM00090 RIO-like kinase AM354_RS07305 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS07340 SM00507 HNH nucleases AM354_RS07355 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM354_RS07370 SM00347 helix_turn_helix multiple antibiotic resistance protein AM354_RS07390 SM00382 ATPases associated with a variety of cellular activities AM354_RS07420 SM01217 AM354_RS07420 AM354_RS07435 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS07460 SM00091 PAS domain AM354_RS07485 SM00382 ATPases associated with a variety of cellular activities AM354_RS07550 SM00996 S-adenosyl-L-homocysteine hydrolase AM354_RS07550 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM354_RS07555 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS07595 SM00822 AM354_RS07595 AM354_RS07605 SM00421 helix_turn_helix, Lux Regulon AM354_RS07605 SM00448 cheY-homologous receiver domain AM354_RS07610 SM00387 Histidine kinase-like ATPases AM354_RS07630 SM00382 ATPases associated with a variety of cellular activities AM354_RS07650 SM00487 DEAD-like helicases superfamily AM354_RS07650 SM00490 helicase superfamily c-terminal domain AM354_RS07665 SM00382 ATPases associated with a variety of cellular activities AM354_RS07700 SM00852 Probable molybdopterin binding domain AM354_RS07705 SM00729 Elongator protein 3, MiaB family, Radical SAM AM354_RS07720 SM00487 DEAD-like helicases superfamily AM354_RS07720 SM00490 helicase superfamily c-terminal domain AM354_RS07725 SM00382 ATPases associated with a variety of cellular activities AM354_RS07745 SM00729 Elongator protein 3, MiaB family, Radical SAM AM354_RS07745 SM00876 Biotin and Thiamin Synthesis associated domain AM354_RS07775 SM00382 ATPases associated with a variety of cellular activities AM354_RS07795 SM00382 ATPases associated with a variety of cellular activities AM354_RS07825 SM00382 ATPases associated with a variety of cellular activities AM354_RS07860 SM00855 Phosphoglycerate mutase family AM354_RS07880 SM00421 helix_turn_helix, Lux Regulon AM354_RS07880 SM00448 cheY-homologous receiver domain AM354_RS07885 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS07885 SM00073 Histidine Phosphotransfer domain AM354_RS07885 SM00387 Histidine kinase-like ATPases AM354_RS07885 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS07885 SM00448 cheY-homologous receiver domain AM354_RS08005 SM00881 CoA binding domain AM354_RS08020 SM00861 Transketolase, pyrimidine binding domain AM354_RS08050 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AM354_RS08050 SM01232 AM354_RS08050 AM354_RS08075 SM00797 Allophanate hydrolase subunit 2 AM354_RS08080 SM00796 Allophanate hydrolase subunit 1 AM354_RS08130 SM00387 Histidine kinase-like ATPases AM354_RS08130 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS08135 SM00448 cheY-homologous receiver domain AM354_RS08135 SM00862 Transcriptional regulatory protein, C terminal AM354_RS08180 SM01081 Putative carbohydrate binding domain AM354_RS08225 SM00060 Fibronectin type 3 domain AM354_RS08225 SM00495 Chitin-binding domain type 3 AM354_RS08270 SM00729 Elongator protein 3, MiaB family, Radical SAM AM354_RS08290 SM00116 Domain in cystathionine beta-synthase and other proteins. AM354_RS08290 SM01091 Transporter associated domain AM354_RS08300 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS08315 SM00382 ATPases associated with a variety of cellular activities AM354_RS08380 SM00936 Penicillin-binding protein 5, C-terminal domain AM354_RS08395 SM00729 Elongator protein 3, MiaB family, Radical SAM AM354_RS08405 SM00267 diguanylate cyclase AM354_RS08425 SM00357 Cold shock protein domain AM354_RS08455 SM00382 ATPases associated with a variety of cellular activities AM354_RS08465 SM00357 Cold shock protein domain AM354_RS08470 SM00267 diguanylate cyclase AM354_RS08495 SM00829 Enoylreductase AM354_RS08500 SM00829 Enoylreductase AM354_RS08540 SM00840 AM354_RS08540 AM354_RS08555 SM01001 AIR carboxylase AM354_RS08565 SM00347 helix_turn_helix multiple antibiotic resistance protein AM354_RS08575 SM00382 ATPases associated with a variety of cellular activities AM354_RS08585 SM00822 AM354_RS08585 AM354_RS08665 SM00346 helix_turn_helix isocitrate lyase regulation AM354_RS08680 SM00244 prohibitin homologues AM354_RS08690 SM00422 helix_turn_helix, mercury resistance AM354_RS08725 SM00823 Phosphopantetheine attachment site AM354_RS08750 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS08800 SM00387 Histidine kinase-like ATPases AM354_RS08805 SM00493 AM354_RS08805 AM354_RS08815 SM00382 ATPases associated with a variety of cellular activities AM354_RS08880 SM00382 ATPases associated with a variety of cellular activities AM354_RS08960 SM00382 ATPases associated with a variety of cellular activities AM354_RS08985 SM00862 Transcriptional regulatory protein, C terminal AM354_RS09015 SM00938 Nitrogen regulatory protein P-II AM354_RS09020 SM00382 ATPases associated with a variety of cellular activities AM354_RS09025 SM00382 ATPases associated with a variety of cellular activities AM354_RS09030 SM00344 helix_turn_helix ASNC type AM354_RS09060 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM354_RS09070 SM00411 bacterial (prokaryotic) histone like domain AM354_RS09075 SM00382 ATPases associated with a variety of cellular activities AM354_RS09075 SM00464 Found in ATP-dependent protease La (LON) AM354_RS09080 SM00382 ATPases associated with a variety of cellular activities AM354_RS09080 SM00994 ClpX C4-type zinc finger AM354_RS09080 SM01086 C-terminal, D2-small domain, of ClpB protein AM354_RS09160 SM00912 haemagglutination activity domain AM354_RS09165 SM00981 AM354_RS09165 AM354_RS09180 SM00861 Transketolase, pyrimidine binding domain AM354_RS09235 SM01323 AM354_RS09235 AM354_RS09265 SM00642 Alpha-amylase domain AM354_RS09285 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS09305 SM00091 PAS domain AM354_RS09305 SM00387 Histidine kinase-like ATPases AM354_RS09305 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS09310 SM00448 cheY-homologous receiver domain AM354_RS09310 SM00862 Transcriptional regulatory protein, C terminal AM354_RS09325 SM01061 CAT RNA binding domain AM354_RS09370 SM00346 helix_turn_helix isocitrate lyase regulation AM354_RS09385 SM00382 ATPases associated with a variety of cellular activities AM354_RS09395 SM00965 Secretin and TonB N terminus short domain AM354_RS09420 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS09475 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS09525 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS09525 SM01134 AM354_RS09525 AM354_RS09575 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS09590 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS09710 SM00387 Histidine kinase-like ATPases AM354_RS09710 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS09715 SM00448 cheY-homologous receiver domain AM354_RS09715 SM00862 Transcriptional regulatory protein, C terminal AM354_RS09765 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AM354_RS09835 SM00900 AM354_RS09835 AM354_RS09895 SM01007 Class II Aldolase and Adducin N-terminal domain AM354_RS09940 SM00479 AM354_RS09940 AM354_RS09955 SM00849 Metallo-beta-lactamase superfamily AM354_RS09960 SM00257 Lysin motif AM354_RS10010 SM00382 ATPases associated with a variety of cellular activities AM354_RS10010 SM01086 C-terminal, D2-small domain, of ClpB protein AM354_RS10020 SM00363 S4 RNA-binding domain AM354_RS10045 SM00830 Chorismate mutase type II AM354_RS10050 SM00830 Chorismate mutase type II AM354_RS10100 SM00382 ATPases associated with a variety of cellular activities AM354_RS10100 SM00962 SRP54-type protein, GTPase domain AM354_RS10100 SM00963 SRP54-type protein, helical bundle domain AM354_RS10110 SM01091 Transporter associated domain AM354_RS10165 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AM354_RS10175 SM00382 ATPases associated with a variety of cellular activities AM354_RS10195 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS10220 SM00822 AM354_RS10220 AM354_RS10240 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AM354_RS10240 SM00534 ATPase domain of DNA mismatch repair MUTS family AM354_RS10250 SM00257 Lysin motif AM354_RS10285 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS10285 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AM354_RS10295 SM00382 ATPases associated with a variety of cellular activities AM354_RS10390 SM01192 AM354_RS10390 AM354_RS10390 SM01193 AM354_RS10390 AM354_RS10405 SM00954 Region found in RelA / SpoT proteins AM354_RS10415 SM00073 Histidine Phosphotransfer domain AM354_RS10415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS10415 SM00387 Histidine kinase-like ATPases AM354_RS10415 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS10415 SM00448 cheY-homologous receiver domain AM354_RS10420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM354_RS10425 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM354_RS10470 SM00644 AM354_RS10470 AM354_RS10495 SM01240 AM354_RS10495 AM354_RS10520 SM00957 SecA DEAD-like domain AM354_RS10520 SM00958 SecA preprotein cross-linking domain AM354_RS10540 SM00864 Tubulin/FtsZ family, GTPase domain AM354_RS10540 SM00865 Tubulin/FtsZ family, C-terminal domain AM354_RS10545 SM00842 Cell division protein FtsA AM354_RS10620 SM00354 helix_turn _helix lactose operon repressor AM354_RS10645 SM00917 LeuA allosteric (dimerisation) domain AM354_RS10650 SM01329 AM354_RS10650 AM354_RS10695 SM00382 ATPases associated with a variety of cellular activities AM354_RS10720 SM00486 DNA polymerase type-B family AM354_RS10725 SM00487 DEAD-like helicases superfamily AM354_RS10725 SM00490 helicase superfamily c-terminal domain AM354_RS10735 SM00271 DnaJ molecular chaperone homology domain AM354_RS10755 SM00650 Ribosomal RNA adenine dimethylases AM354_RS10805 SM00851 MGS-like domain AM354_RS10805 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM354_RS10810 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AM354_RS10860 SM00904 Riboflavin kinase AM354_RS10880 SM00271 DnaJ molecular chaperone homology domain AM354_RS10900 SM00852 Probable molybdopterin binding domain AM354_RS10945 SM00448 cheY-homologous receiver domain AM354_RS10945 SM00862 Transcriptional regulatory protein, C terminal AM354_RS10955 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS10955 SM00871 Bacterial transcription activator, effector binding domain AM354_RS10960 SM00855 Phosphoglycerate mutase family AM354_RS10985 SM00267 diguanylate cyclase AM354_RS10995 SM00382 ATPases associated with a variety of cellular activities AM354_RS11000 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS11010 SM00829 Enoylreductase AM354_RS11020 SM00829 Enoylreductase AM354_RS11030 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS11035 SM00382 ATPases associated with a variety of cellular activities AM354_RS11060 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AM354_RS11065 SM01133 AM354_RS11065 AM354_RS11095 SM00749 bacterial OsmY and nodulation domain AM354_RS11150 SM00267 diguanylate cyclase AM354_RS11195 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM354_RS11210 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS11210 SM00895 AM354_RS11210 AM354_RS11220 SM00903 Flavin reductase like domain AM354_RS11230 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS11275 SM00347 helix_turn_helix multiple antibiotic resistance protein AM354_RS11280 SM00822 AM354_RS11280 AM354_RS11290 SM00822 AM354_RS11290 AM354_RS11305 SM00729 Elongator protein 3, MiaB family, Radical SAM AM354_RS11315 SM00421 helix_turn_helix, Lux Regulon AM354_RS11345 SM00421 helix_turn_helix, Lux Regulon AM354_RS11380 SM00155 Phospholipase D. Active site motifs. AM354_RS11415 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS11415 SM00871 Bacterial transcription activator, effector binding domain AM354_RS11425 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS11455 SM00882 Coenzyme A transferase AM354_RS11460 SM00882 Coenzyme A transferase AM354_RS11485 SM01230 AM354_RS11485 AM354_RS11505 SM00382 ATPases associated with a variety of cellular activities AM354_RS11515 SM00382 ATPases associated with a variety of cellular activities AM354_RS11540 SM00833 Cobalamin synthesis protein cobW C-terminal domain AM354_RS11570 SM00354 helix_turn _helix lactose operon repressor AM354_RS11615 SM00248 ankyrin repeats AM354_RS11625 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS11625 SM01134 AM354_RS11625 AM354_RS11640 SM01133 AM354_RS11640 AM354_RS11665 SM00421 helix_turn_helix, Lux Regulon AM354_RS11670 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS11670 SM01134 AM354_RS11670 AM354_RS11745 SM00823 Phosphopantetheine attachment site AM354_RS11755 SM00831 Cation transporter/ATPase, N-terminus AM354_RS11760 SM00354 helix_turn _helix lactose operon repressor AM354_RS11770 SM00642 Alpha-amylase domain AM354_RS11815 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS11815 SM00866 AM354_RS11815 AM354_RS11840 SM00382 ATPases associated with a variety of cellular activities AM354_RS11845 SM00382 ATPases associated with a variety of cellular activities AM354_RS11855 SM00072 Guanylate kinase homologues. AM354_RS11870 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM354_RS11950 SM00487 DEAD-like helicases superfamily AM354_RS11950 SM00490 helicase superfamily c-terminal domain AM354_RS11960 SM00028 Tetratricopeptide repeats AM354_RS11965 SM00316 Ribosomal protein S1-like RNA-binding domain AM354_RS11965 SM00322 K homology RNA-binding domain AM354_RS11975 SM01387 AM354_RS11975 AM354_RS11995 SM00316 Ribosomal protein S1-like RNA-binding domain AM354_RS12030 SM00382 ATPases associated with a variety of cellular activities AM354_RS12040 SM01103 AM354_RS12040 AM354_RS12055 SM00448 cheY-homologous receiver domain AM354_RS12055 SM00862 Transcriptional regulatory protein, C terminal AM354_RS12060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS12060 SM00387 Histidine kinase-like ATPases AM354_RS12060 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS12155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM354_RS12155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS12185 SM00116 Domain in cystathionine beta-synthase and other proteins. AM354_RS12185 SM01091 Transporter associated domain AM354_RS12285 SM00967 RNA 2'-O ribose methyltransferase substrate binding AM354_RS12290 SM00316 Ribosomal protein S1-like RNA-binding domain AM354_RS12290 SM00357 Cold shock protein domain AM354_RS12290 SM00955 AM354_RS12290 AM354_RS12300 SM00788 Adenylosuccinate synthetase AM354_RS12310 SM00244 prohibitin homologues AM354_RS12315 SM00244 prohibitin homologues AM354_RS12335 SM00853 MutL C terminal dimerisation domain AM354_RS12335 SM01340 AM354_RS12335 AM354_RS12340 SM00257 Lysin motif AM354_RS12340 SM00646 AM354_RS12340 AM354_RS12375 SM00479 AM354_RS12375 AM354_RS12440 SM00841 Elongation factor P, C-terminal AM354_RS12440 SM01185 AM354_RS12440 AM354_RS12455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM354_RS12455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS12465 SM00883 Chaperonin 10 Kd subunit AM354_RS12540 SM00824 Thioesterase AM354_RS12545 SM00923 MbtH-like protein AM354_RS12565 SM00823 Phosphopantetheine attachment site AM354_RS12635 SM00798 AICARFT/IMPCHase bienzyme AM354_RS12635 SM00851 MGS-like domain AM354_RS12640 SM01209 AM354_RS12640 AM354_RS12640 SM01210 AM354_RS12640 AM354_RS12650 SM00411 bacterial (prokaryotic) histone like domain AM354_RS12705 SM00876 Biotin and Thiamin Synthesis associated domain AM354_RS12720 SM00387 Histidine kinase-like ATPases AM354_RS12735 SM00663 RNA polymerase I subunit A N-terminus AM354_RS12760 SM00649 Ribosomal protein L11/L12 AM354_RS12765 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AM354_RS12765 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AM354_RS12890 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AM354_RS12890 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AM354_RS12895 SM01004 Delta-aminolevulinic acid dehydratase AM354_RS12990 SM00382 ATPases associated with a variety of cellular activities AM354_RS13015 SM00382 ATPases associated with a variety of cellular activities AM354_RS13020 SM00382 ATPases associated with a variety of cellular activities AM354_RS13065 SM00382 ATPases associated with a variety of cellular activities AM354_RS13070 SM00382 ATPases associated with a variety of cellular activities AM354_RS13070 SM00962 SRP54-type protein, GTPase domain AM354_RS13070 SM00963 SRP54-type protein, helical bundle domain AM354_RS13100 SM00235 Zinc-dependent metalloprotease AM354_RS13190 SM00341 Helicase and RNase D C-terminal AM354_RS13190 SM00487 DEAD-like helicases superfamily AM354_RS13190 SM00490 helicase superfamily c-terminal domain AM354_RS13190 SM00956 AM354_RS13190 AM354_RS13255 SM01219 AM354_RS13255 AM354_RS13350 SM00984 UDP binding domain AM354_RS13370 SM00357 Cold shock protein domain AM354_RS13370 SM00382 ATPases associated with a variety of cellular activities AM354_RS13370 SM00959 Rho termination factor, N-terminal domain AM354_RS13380 SM00487 DEAD-like helicases superfamily AM354_RS13380 SM00490 helicase superfamily c-terminal domain AM354_RS13410 SM00052 Putative diguanylate phosphodiesterase AM354_RS13410 SM00267 diguanylate cyclase AM354_RS13415 SM00028 Tetratricopeptide repeats AM354_RS13460 SM00382 ATPases associated with a variety of cellular activities AM354_RS13465 SM00382 ATPases associated with a variety of cellular activities AM354_RS13485 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AM354_RS13485 SM00636 AM354_RS13485 AM354_RS13505 SM00387 Histidine kinase-like ATPases AM354_RS13510 SM00421 helix_turn_helix, Lux Regulon AM354_RS13510 SM00448 cheY-homologous receiver domain AM354_RS13525 SM00347 helix_turn_helix multiple antibiotic resistance protein AM354_RS13530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM354_RS13600 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS13680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM354_RS13680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS13680 SM01358 AM354_RS13680 AM354_RS13700 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS13745 SM00869 Autotransporter beta-domain AM354_RS13765 SM00354 helix_turn _helix lactose operon repressor AM354_RS13790 SM00642 Alpha-amylase domain AM354_RS13835 SM00014 Acid phosphatase homologues AM354_RS13855 SM00387 Histidine kinase-like ATPases AM354_RS13855 SM00433 TopoisomeraseII AM354_RS13865 SM00480 DNA polymerase III beta subunit AM354_RS13870 SM00382 ATPases associated with a variety of cellular activities AM354_RS13870 SM00760 Bacterial dnaA protein helix-turn-helix domain AM354_RS13885 SM01234 AM354_RS13885 AM354_RS13945 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS13955 SM00382 ATPases associated with a variety of cellular activities AM354_RS13990 SM00382 ATPases associated with a variety of cellular activities AM354_RS14035 SM01228 AM354_RS14035 AM354_RS14045 SM00344 helix_turn_helix ASNC type AM354_RS14055 SM00327 von Willebrand factor (vWF) type A domain AM354_RS14060 SM00382 ATPases associated with a variety of cellular activities AM354_RS14075 SM00382 ATPases associated with a variety of cellular activities AM354_RS14095 SM00354 helix_turn _helix lactose operon repressor AM354_RS14105 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS14105 SM00895 AM354_RS14105 AM354_RS14155 SM00563 Phosphate acyltransferases AM354_RS14160 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AM354_RS14160 SM00474 3'-5' exonuclease AM354_RS14160 SM00475 5'-3' exonuclease AM354_RS14160 SM00482 DNA polymerase A domain AM354_RS14185 SM00729 Elongator protein 3, MiaB family, Radical SAM AM354_RS14190 SM00382 ATPases associated with a variety of cellular activities AM354_RS14190 SM00448 cheY-homologous receiver domain AM354_RS14195 SM00091 PAS domain AM354_RS14195 SM00387 Histidine kinase-like ATPases AM354_RS14195 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS14200 SM01230 AM354_RS14200 AM354_RS14245 SM00487 DEAD-like helicases superfamily AM354_RS14245 SM00490 helicase superfamily c-terminal domain AM354_RS14255 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM354_RS14255 SM00954 Region found in RelA / SpoT proteins AM354_RS14260 SM01409 AM354_RS14260 AM354_RS14265 SM00072 Guanylate kinase homologues. AM354_RS14335 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AM354_RS14335 SM01232 AM354_RS14335 AM354_RS14420 SM00829 Enoylreductase AM354_RS14440 SM00450 Rhodanese Homology Domain AM354_RS14460 SM00971 Serine acetyltransferase, N-terminal AM354_RS14470 SM00880 AM354_RS14470 AM354_RS14480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS14480 SM00387 Histidine kinase-like ATPases AM354_RS14480 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS14485 SM00448 cheY-homologous receiver domain AM354_RS14485 SM00862 Transcriptional regulatory protein, C terminal AM354_RS14570 SM00382 ATPases associated with a variety of cellular activities AM354_RS14570 SM01086 C-terminal, D2-small domain, of ClpB protein AM354_RS14585 SM00354 helix_turn _helix lactose operon repressor AM354_RS14590 SM00487 DEAD-like helicases superfamily AM354_RS14590 SM00490 helicase superfamily c-terminal domain AM354_RS14630 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM354_RS14745 SM00382 ATPases associated with a variety of cellular activities AM354_RS14815 SM00052 Putative diguanylate phosphodiesterase AM354_RS14845 SM00052 Putative diguanylate phosphodiesterase AM354_RS14845 SM00091 PAS domain AM354_RS14845 SM00267 diguanylate cyclase AM354_RS14865 SM00869 Autotransporter beta-domain AM354_RS14870 SM00869 Autotransporter beta-domain AM354_RS14880 SM00387 Histidine kinase-like ATPases AM354_RS14880 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS14880 SM00448 cheY-homologous receiver domain AM354_RS14935 SM00382 ATPases associated with a variety of cellular activities AM354_RS14945 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM354_RS14960 SM00822 AM354_RS14960 AM354_RS15235 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS15250 SM00822 AM354_RS15250 AM354_RS15250 SM00825 Beta-ketoacyl synthase AM354_RS15250 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AM354_RS15255 SM00823 Phosphopantetheine attachment site AM354_RS15270 SM00829 Enoylreductase AM354_RS15280 SM00421 helix_turn_helix, Lux Regulon AM354_RS15325 SM00382 ATPases associated with a variety of cellular activities AM354_RS15405 SM00014 Acid phosphatase homologues AM354_RS15445 SM00354 helix_turn _helix lactose operon repressor AM354_RS15465 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM354_RS15470 SM00642 Alpha-amylase domain AM354_RS15475 SM00642 Alpha-amylase domain AM354_RS15500 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS15500 SM01134 AM354_RS15500 AM354_RS15510 SM00450 Rhodanese Homology Domain AM354_RS15515 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS15515 SM01134 AM354_RS15515 AM354_RS15540 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AM354_RS15550 SM01007 Class II Aldolase and Adducin N-terminal domain AM354_RS15555 SM00421 helix_turn_helix, Lux Regulon AM354_RS15600 SM00899 AM354_RS15600 AM354_RS15605 SM00316 Ribosomal protein S1-like RNA-binding domain AM354_RS15605 SM00732 Likely ribonuclease with RNase H fold. AM354_RS15615 SM00271 DnaJ molecular chaperone homology domain AM354_RS15625 SM00448 cheY-homologous receiver domain AM354_RS15625 SM00862 Transcriptional regulatory protein, C terminal AM354_RS15630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS15630 SM00387 Histidine kinase-like ATPases AM354_RS15630 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS15655 SM00363 S4 RNA-binding domain AM354_RS15780 SM00354 helix_turn _helix lactose operon repressor AM354_RS15805 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM354_RS15810 SM00448 cheY-homologous receiver domain AM354_RS15810 SM00850 LytTr DNA-binding domain AM354_RS15825 SM00382 ATPases associated with a variety of cellular activities AM354_RS15845 SM00100 Cyclic nucleotide-monophosphate binding domain AM354_RS15845 SM00419 helix_turn_helix, cAMP Regulatory protein AM354_RS15880 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS15885 SM00382 ATPases associated with a variety of cellular activities AM354_RS15900 SM00382 ATPases associated with a variety of cellular activities AM354_RS15925 SM00354 helix_turn _helix lactose operon repressor AM354_RS15980 SM00838 Elongation factor G C-terminus AM354_RS15980 SM00889 Elongation factor G, domain IV AM354_RS16000 SM01403 AM354_RS16000 AM354_RS16020 SM01382 AM354_RS16020 AM354_RS16020 SM01383 AM354_RS16020 AM354_RS16035 SM00322 K homology RNA-binding domain AM354_RS16055 SM01374 AM354_RS16055 AM354_RS16060 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AM354_RS16125 SM00363 S4 RNA-binding domain AM354_RS16125 SM01390 AM354_RS16125 AM354_RS16130 SM00662 RNA polymerases D AM354_RS16145 SM00422 helix_turn_helix, mercury resistance AM354_RS16280 SM00346 helix_turn_helix isocitrate lyase regulation AM354_RS16285 SM01018 B12 binding domain AM354_RS16315 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS16315 SM00866 AM354_RS16315 AM354_RS16340 SM00382 ATPases associated with a variety of cellular activities AM354_RS16350 SM00912 haemagglutination activity domain AM354_RS16410 SM00382 ATPases associated with a variety of cellular activities AM354_RS16430 SM00354 helix_turn _helix lactose operon repressor AM354_RS16450 SM00563 Phosphate acyltransferases AM354_RS16480 SM01266 AM354_RS16480 AM354_RS16495 SM00829 Enoylreductase AM354_RS16500 SM00382 ATPases associated with a variety of cellular activities AM354_RS16505 SM01005 Alanine racemase, C-terminal domain AM354_RS16510 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS16515 SM00344 helix_turn_helix ASNC type AM354_RS16535 SM01266 AM354_RS16535 AM354_RS16540 SM00829 Enoylreductase AM354_RS16610 SM00823 Phosphopantetheine attachment site AM354_RS16610 SM00824 Thioesterase AM354_RS16660 SM00878 Biotin carboxylase C-terminal domain AM354_RS16685 SM00829 Enoylreductase AM354_RS16690 SM00052 Putative diguanylate phosphodiesterase AM354_RS16690 SM00267 diguanylate cyclase AM354_RS16715 SM00316 Ribosomal protein S1-like RNA-binding domain AM354_RS16805 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS16880 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS16915 SM00382 ATPases associated with a variety of cellular activities AM354_RS16935 SM00116 Domain in cystathionine beta-synthase and other proteins. AM354_RS16945 SM00382 ATPases associated with a variety of cellular activities AM354_RS16980 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM354_RS16985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM354_RS17045 SM00729 Elongator protein 3, MiaB family, Radical SAM AM354_RS17050 SM00014 Acid phosphatase homologues AM354_RS17055 SM00073 Histidine Phosphotransfer domain AM354_RS17055 SM00091 PAS domain AM354_RS17055 SM00387 Histidine kinase-like ATPases AM354_RS17055 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS17055 SM00448 cheY-homologous receiver domain AM354_RS17070 SM00749 bacterial OsmY and nodulation domain AM354_RS17155 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS17155 SM00895 AM354_RS17155 AM354_RS17170 SM00858 AM354_RS17170 AM354_RS17210 SM00382 ATPases associated with a variety of cellular activities AM354_RS17215 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS17265 SM00400 zinc finger AM354_RS17265 SM00493 AM354_RS17265 AM354_RS17265 SM00766 DNA primase DnaG DnaB-binding AM354_RS17280 SM01207 AM354_RS17280 AM354_RS17285 SM00905 Dihydroneopterin aldolase AM354_RS17300 SM00287 Bacterial SH3 domain homologues AM354_RS17305 SM01118 AM354_RS17305 AM354_RS17330 SM00098 Alkaline phosphatase homologues AM354_RS17360 SM01120 AM354_RS17360 AM354_RS17370 SM00091 PAS domain AM354_RS17400 SM00387 Histidine kinase-like ATPases AM354_RS17400 SM00433 TopoisomeraseII AM354_RS17420 SM00434 DNA Topoisomerase IV AM354_RS17425 SM00563 Phosphate acyltransferases AM354_RS17460 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS17460 SM00866 AM354_RS17460 AM354_RS17500 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS17520 SM00849 Metallo-beta-lactamase superfamily AM354_RS17530 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS17575 SM01038 Beta galactosidase small chain AM354_RS17580 SM00354 helix_turn _helix lactose operon repressor AM354_RS17585 SM00829 Enoylreductase AM354_RS17600 SM00857 Resolvase, N terminal domain AM354_RS17620 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS17665 SM00382 ATPases associated with a variety of cellular activities AM354_RS17685 SM00965 Secretin and TonB N terminus short domain AM354_RS17735 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS17785 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS17790 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM354_RS17790 SM00267 diguanylate cyclase AM354_RS17815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS17815 SM00387 Histidine kinase-like ATPases AM354_RS17815 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS17820 SM00448 cheY-homologous receiver domain AM354_RS17820 SM00862 Transcriptional regulatory protein, C terminal AM354_RS17850 SM00746 metallochaperone-like domain AM354_RS17890 SM00448 cheY-homologous receiver domain AM354_RS17890 SM00862 Transcriptional regulatory protein, C terminal AM354_RS17895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS17895 SM00387 Histidine kinase-like ATPases AM354_RS17895 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS17955 SM00829 Enoylreductase AM354_RS17975 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS18010 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS18035 SM00354 helix_turn _helix lactose operon repressor AM354_RS18040 SM00640 Glycosyl hydrolases family 32 AM354_RS18105 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS18115 SM00421 helix_turn_helix, Lux Regulon AM354_RS18140 SM00862 Transcriptional regulatory protein, C terminal AM354_RS18150 SM00862 Transcriptional regulatory protein, C terminal AM354_RS18200 SM00421 helix_turn_helix, Lux Regulon AM354_RS18210 SM00382 ATPases associated with a variety of cellular activities AM354_RS18250 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AM354_RS18250 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AM354_RS18250 SM00493 AM354_RS18250 AM354_RS18275 SM00422 helix_turn_helix, mercury resistance AM354_RS18485 SM00857 Resolvase, N terminal domain AM354_RS18510 SM00857 Resolvase, N terminal domain AM354_RS18520 SM00422 helix_turn_helix, mercury resistance AM354_RS18545 SM00422 helix_turn_helix, mercury resistance AM354_RS18605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS18625 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS18660 SM00857 Resolvase, N terminal domain AM354_RS18675 SM00422 helix_turn_helix, mercury resistance AM354_RS18685 SM00671 Sel1-like repeats. AM354_RS18705 SM00422 helix_turn_helix, mercury resistance AM354_RS18810 SM00478 endonuclease III AM354_RS18810 SM00525 AM354_RS18810 AM354_RS18840 SM00729 Elongator protein 3, MiaB family, Radical SAM AM354_RS18850 SM01152 AM354_RS18850 AM354_RS18870 SM00382 ATPases associated with a variety of cellular activities AM354_RS18875 SM00732 Likely ribonuclease with RNase H fold. AM354_RS18900 SM00731 SprT homologues. AM354_RS18910 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS18945 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS18945 SM00895 AM354_RS18945 AM354_RS19000 SM00947 Carbonic anhydrase AM354_RS19005 SM00382 ATPases associated with a variety of cellular activities AM354_RS19035 SM00448 cheY-homologous receiver domain AM354_RS19035 SM00862 Transcriptional regulatory protein, C terminal AM354_RS19040 SM00387 Histidine kinase-like ATPases AM354_RS19040 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS19090 SM00487 DEAD-like helicases superfamily AM354_RS19090 SM00490 helicase superfamily c-terminal domain AM354_RS19090 SM00847 Helicase associated domain (HA2) Add an annotation AM354_RS19105 SM00382 ATPases associated with a variety of cellular activities AM354_RS19170 SM00822 AM354_RS19170 AM354_RS19175 SM00346 helix_turn_helix isocitrate lyase regulation AM354_RS19230 SM00861 Transketolase, pyrimidine binding domain AM354_RS19255 SM00382 ATPases associated with a variety of cellular activities AM354_RS19280 SM01329 AM354_RS19280 AM354_RS19290 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM354_RS19340 SM01007 Class II Aldolase and Adducin N-terminal domain AM354_RS19350 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AM354_RS19390 SM00382 ATPases associated with a variety of cellular activities AM354_RS19395 SM00346 helix_turn_helix isocitrate lyase regulation AM354_RS19445 SM01011 Aminopeptidase P, N-terminal domain AM354_RS19475 SM00829 Enoylreductase AM354_RS19485 SM00387 Histidine kinase-like ATPases AM354_RS19485 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS19490 SM00448 cheY-homologous receiver domain AM354_RS19490 SM00862 Transcriptional regulatory protein, C terminal AM354_RS19515 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS19515 SM00895 AM354_RS19515 AM354_RS19540 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS19540 SM01134 AM354_RS19540 AM354_RS19550 SM00382 ATPases associated with a variety of cellular activities AM354_RS19610 SM00448 cheY-homologous receiver domain AM354_RS19610 SM00862 Transcriptional regulatory protein, C terminal AM354_RS19615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS19615 SM00387 Histidine kinase-like ATPases AM354_RS19615 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS19700 SM00257 Lysin motif AM354_RS19705 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS19705 SM00871 Bacterial transcription activator, effector binding domain AM354_RS19710 SM00382 ATPases associated with a variety of cellular activities AM354_RS19770 SM00382 ATPases associated with a variety of cellular activities AM354_RS19780 SM00382 ATPases associated with a variety of cellular activities AM354_RS19790 SM00825 Beta-ketoacyl synthase AM354_RS19830 SM00421 helix_turn_helix, Lux Regulon AM354_RS19835 SM00421 helix_turn_helix, Lux Regulon AM354_RS19845 SM00382 ATPases associated with a variety of cellular activities AM354_RS19860 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS19860 SM01134 AM354_RS19860 AM354_RS19890 SM00382 ATPases associated with a variety of cellular activities AM354_RS19905 SM00849 Metallo-beta-lactamase superfamily AM354_RS19925 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS19935 SM00354 helix_turn _helix lactose operon repressor AM354_RS19950 SM00563 Phosphate acyltransferases AM354_RS19975 SM00927 DNA mismatch repair enzyme MutH AM354_RS19985 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM354_RS20045 SM00646 AM354_RS20045 AM354_RS20065 SM00925 MltA specific insert domain AM354_RS20105 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AM354_RS20105 SM00475 5'-3' exonuclease AM354_RS20135 SM01359 AM354_RS20135 AM354_RS20135 SM01360 AM354_RS20135 AM354_RS20165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM354_RS20210 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM354_RS20220 SM00935 Outer membrane protein (OmpH-like) AM354_RS20250 SM00481 DNA polymerase alpha chain like domain AM354_RS20275 SM00862 Transcriptional regulatory protein, C terminal AM354_RS20295 SM00977 TilS substrate C-terminal domain AM354_RS20315 SM01322 AM354_RS20315 AM354_RS20355 SM00382 ATPases associated with a variety of cellular activities AM354_RS20355 SM00930 AM354_RS20355 AM354_RS20390 SM00155 Phospholipase D. Active site motifs. AM354_RS20395 SM00881 CoA binding domain AM354_RS20400 SM01144 AM354_RS20400 AM354_RS20410 SM00967 RNA 2'-O ribose methyltransferase substrate binding AM354_RS20430 SM00347 helix_turn_helix multiple antibiotic resistance protein AM354_RS20465 SM00382 ATPases associated with a variety of cellular activities AM354_RS20470 SM00448 cheY-homologous receiver domain AM354_RS20475 SM00091 PAS domain AM354_RS20475 SM00387 Histidine kinase-like ATPases AM354_RS20490 SM00849 Metallo-beta-lactamase superfamily AM354_RS20495 SM00822 AM354_RS20495 AM354_RS20530 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS20580 SM00463 Small MutS-related domain AM354_RS20645 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS20645 SM00866 AM354_RS20645 AM354_RS20965 SM00986 Uracil DNA glycosylase superfamily AM354_RS20965 SM00987 UreE urease accessory protein, C-terminal domain AM354_RS20980 SM00248 ankyrin repeats AM354_RS20985 SM00487 DEAD-like helicases superfamily AM354_RS20985 SM00490 helicase superfamily c-terminal domain AM354_RS21035 SM00358 Double-stranded RNA binding motif AM354_RS21035 SM00535 Ribonuclease III family AM354_RS21095 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS21100 SM01211 AM354_RS21100 AM354_RS21105 SM00387 Histidine kinase-like ATPases AM354_RS21105 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS21115 SM00382 ATPases associated with a variety of cellular activities AM354_RS21115 SM00448 cheY-homologous receiver domain AM354_RS21125 SM00938 Nitrogen regulatory protein P-II AM354_RS21155 SM00382 ATPases associated with a variety of cellular activities AM354_RS21245 SM00271 DnaJ molecular chaperone homology domain AM354_RS21275 SM00562 AM354_RS21275 AM354_RS21285 SM00028 Tetratricopeptide repeats AM354_RS21290 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS21310 SM00564 beta-propeller repeat AM354_RS21340 SM00354 helix_turn _helix lactose operon repressor AM354_RS21365 SM00116 Domain in cystathionine beta-synthase and other proteins. AM354_RS21365 SM01240 AM354_RS21365 AM354_RS21415 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS21640 SM00387 Histidine kinase-like ATPases AM354_RS21640 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS21640 SM00448 cheY-homologous receiver domain AM354_RS21645 SM00421 helix_turn_helix, Lux Regulon AM354_RS21645 SM00448 cheY-homologous receiver domain AM354_RS21655 SM00869 Autotransporter beta-domain AM354_RS21660 SM00363 S4 RNA-binding domain AM354_RS21735 SM00116 Domain in cystathionine beta-synthase and other proteins. AM354_RS21740 SM00420 helix_turn_helix, Deoxyribose operon repressor AM354_RS21740 SM01134 AM354_RS21740 AM354_RS21775 SM01133 AM354_RS21775 AM354_RS21780 SM00046 Diacylglycerol kinase catalytic domain (presumed) AM354_RS21805 SM00448 cheY-homologous receiver domain AM354_RS21805 SM00862 Transcriptional regulatory protein, C terminal AM354_RS21810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS21810 SM00387 Histidine kinase-like ATPases AM354_RS21810 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS21855 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS21855 SM00478 endonuclease III AM354_RS21855 SM01009 AlkA N-terminal domain AM354_RS21865 SM00052 Putative diguanylate phosphodiesterase AM354_RS21865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AM354_RS21865 SM00091 PAS domain AM354_RS21865 SM00267 diguanylate cyclase AM354_RS21870 SM00116 Domain in cystathionine beta-synthase and other proteins. AM354_RS21870 SM00924 MgtE intracellular N domain AM354_RS21900 SM00382 ATPases associated with a variety of cellular activities AM354_RS21920 SM00912 haemagglutination activity domain AM354_RS22020 SM00344 helix_turn_helix ASNC type AM354_RS22065 SM01130 AM354_RS22065 AM354_RS22115 SM00421 helix_turn_helix, Lux Regulon AM354_RS22140 SM00421 helix_turn_helix, Lux Regulon AM354_RS22140 SM00448 cheY-homologous receiver domain AM354_RS22145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS22145 SM00387 Histidine kinase-like ATPases AM354_RS22150 SM01276 AM354_RS22150 AM354_RS22160 SM00861 Transketolase, pyrimidine binding domain AM354_RS22180 SM00495 Chitin-binding domain type 3 AM354_RS22180 SM00636 AM354_RS22180 AM354_RS22200 SM00919 Malic enzyme, NAD binding domain AM354_RS22200 SM01274 AM354_RS22200 AM354_RS22255 SM00646 AM354_RS22255 AM354_RS22300 SM00382 ATPases associated with a variety of cellular activities AM354_RS22310 SM00448 cheY-homologous receiver domain AM354_RS22310 SM00862 Transcriptional regulatory protein, C terminal AM354_RS22315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS22315 SM00387 Histidine kinase-like ATPases AM354_RS22315 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS22345 SM00771 ZipA, C-terminal domain (FtsZ-binding) AM354_RS22355 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM354_RS22355 SM00292 breast cancer carboxy-terminal domain AM354_RS22355 SM00532 Ligase N family AM354_RS22425 SM00382 ATPases associated with a variety of cellular activities AM354_RS22580 SM00448 cheY-homologous receiver domain AM354_RS22580 SM00850 LytTr DNA-binding domain AM354_RS22585 SM00387 Histidine kinase-like ATPases AM354_RS22675 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AM354_RS22675 SM00091 PAS domain AM354_RS22675 SM00421 helix_turn_helix, Lux Regulon AM354_RS22690 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS22710 SM00382 ATPases associated with a variety of cellular activities AM354_RS22780 SM00855 Phosphoglycerate mutase family AM354_RS22785 SM00463 Small MutS-related domain AM354_RS22825 SM00825 Beta-ketoacyl synthase AM354_RS22855 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS22860 SM00450 Rhodanese Homology Domain AM354_RS22890 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS22925 SM00448 cheY-homologous receiver domain AM354_RS22925 SM00862 Transcriptional regulatory protein, C terminal AM354_RS22930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS22930 SM00387 Histidine kinase-like ATPases AM354_RS22930 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS22940 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS22950 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM354_RS22995 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS23010 SM00382 ATPases associated with a variety of cellular activities AM354_RS23020 SM00905 Dihydroneopterin aldolase AM354_RS23040 SM00354 helix_turn _helix lactose operon repressor AM354_RS23065 SM00861 Transketolase, pyrimidine binding domain AM354_RS23110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM354_RS23145 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM354_RS23150 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM354_RS23150 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM354_RS23205 SM00354 helix_turn _helix lactose operon repressor AM354_RS23210 SM00822 AM354_RS23210 AM354_RS23225 SM01068 Putative carbohydrate binding domain AM354_RS23245 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM354_RS23255 SM01060 AM354_RS23255 AM354_RS23270 SM00852 Probable molybdopterin binding domain AM354_RS23310 SM00434 DNA Topoisomerase IV AM354_RS23315 SM00387 Histidine kinase-like ATPases AM354_RS23315 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS23315 SM00448 cheY-homologous receiver domain AM354_RS23320 SM00421 helix_turn_helix, Lux Regulon AM354_RS23320 SM00448 cheY-homologous receiver domain AM354_RS23325 SM00387 Histidine kinase-like ATPases AM354_RS23435 SM00232 JAB/MPN domain AM354_RS23470 SM00421 helix_turn_helix, Lux Regulon AM354_RS23470 SM00448 cheY-homologous receiver domain AM354_RS23475 SM00387 Histidine kinase-like ATPases AM354_RS23475 SM00388 His Kinase A (phosphoacceptor) domain AM354_RS23490 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM354_RS23520 SM00487 DEAD-like helicases superfamily AM354_RS23520 SM00490 helicase superfamily c-terminal domain AM354_RS23525 SM00363 S4 RNA-binding domain AM354_RS23540 SM00382 ATPases associated with a variety of cellular activities AM354_RS23560 SM00052 Putative diguanylate phosphodiesterase AM354_RS23575 SM00014 Acid phosphatase homologues AM354_RS23580 SM00833 Cobalamin synthesis protein cobW C-terminal domain AM354_RS23600 SM00841 Elongation factor P, C-terminal AM354_RS23600 SM01185 AM354_RS23600 AM354_RS23655 SM00518 AP endonuclease family 2 AM354_RS23680 SM00267 diguanylate cyclase AM354_RS23690 SM00382 ATPases associated with a variety of cellular activities AM354_RS23710 SM00382 ATPases associated with a variety of cellular activities AM354_RS23715 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS23720 SM01230 AM354_RS23720 AM354_RS23735 SM00479 AM354_RS23735 AM354_RS23760 SM00644 AM354_RS23760 AM354_RS23775 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS23790 SM00829 Enoylreductase AM354_RS23800 SM00382 ATPases associated with a variety of cellular activities AM354_RS23820 SM01007 Class II Aldolase and Adducin N-terminal domain AM354_RS23825 SM00354 helix_turn _helix lactose operon repressor AM354_RS23920 SM00822 AM354_RS23920 AM354_RS23990 SM00382 ATPases associated with a variety of cellular activities AM354_RS23995 SM00382 ATPases associated with a variety of cellular activities AM354_RS24060 SM00235 Zinc-dependent metalloprotease AM354_RS24095 SM00646 AM354_RS24095 AM354_RS24120 SM00382 ATPases associated with a variety of cellular activities AM354_RS24130 SM00421 helix_turn_helix, Lux Regulon AM354_RS24145 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS24160 SM01038 Beta galactosidase small chain AM354_RS24165 SM00448 cheY-homologous receiver domain AM354_RS24170 SM00764 Citrate lyase ligase C-terminal domain AM354_RS24270 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS24275 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS24300 SM00530 Helix-turn-helix XRE-family like proteins AM354_RS24335 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS24365 SM00382 ATPases associated with a variety of cellular activities AM354_RS24385 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS24390 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM354_RS24410 SM00564 beta-propeller repeat AM354_RS24445 SM00998 Adenylosuccinate lyase C-terminus AM354_RS24455 SM00882 Coenzyme A transferase AM354_RS24460 SM00882 Coenzyme A transferase AM354_RS24465 SM00346 helix_turn_helix isocitrate lyase regulation AM354_RS24550 SM00421 helix_turn_helix, Lux Regulon AM354_RS24565 SM00564 beta-propeller repeat AM354_RS24575 SM00823 Phosphopantetheine attachment site AM354_RS24600 SM00871 Bacterial transcription activator, effector binding domain AM354_RS24725 SM00267 diguanylate cyclase AM354_RS24770 SM00829 Enoylreductase AM354_RS24785 SM00357 Cold shock protein domain AM354_RS24795 SM00421 helix_turn_helix, Lux Regulon AM354_RS24830 SM00831 Cation transporter/ATPase, N-terminus AM354_RS24855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM354_RS24915 SM00965 Secretin and TonB N terminus short domain AM354_RS24940 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS24970 SM00354 helix_turn _helix lactose operon repressor AM354_RS24975 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS25000 SM00871 Bacterial transcription activator, effector binding domain AM354_RS25015 SM00382 ATPases associated with a variety of cellular activities AM354_RS25015 SM01086 C-terminal, D2-small domain, of ClpB protein AM354_RS25045 SM00331 Sigma factor PP2C-like phosphatases AM354_RS25045 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AM354_RS25185 SM00829 Enoylreductase AM354_RS25230 SM00073 Histidine Phosphotransfer domain AM354_RS25230 SM00260 Two component signalling adaptor domain AM354_RS25230 SM00387 Histidine kinase-like ATPases AM354_RS25230 SM01231 AM354_RS25230 AM354_RS25235 SM00260 Two component signalling adaptor domain AM354_RS25240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM354_RS25240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS25240 SM00319 Homologues of the ligand binding domain of Tar AM354_RS25245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM354_RS25245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS25245 SM00319 Homologues of the ligand binding domain of Tar AM354_RS25250 SM00138 Methyltransferase, chemotaxis proteins AM354_RS25255 SM00448 cheY-homologous receiver domain AM354_RS25260 SM00448 cheY-homologous receiver domain AM354_RS25310 SM00858 AM354_RS25310 AM354_RS25355 SM00047 Lysozyme subfamily 2 AM354_RS25430 SM00382 ATPases associated with a variety of cellular activities AM354_RS25470 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS25515 SM00062 Bacterial periplasmic substrate-binding proteins AM354_RS25515 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AM354_RS25525 SM00382 ATPases associated with a variety of cellular activities AM354_RS25615 SM00382 ATPases associated with a variety of cellular activities AM354_RS25620 SM00382 ATPases associated with a variety of cellular activities AM354_RS25640 SM00421 helix_turn_helix, Lux Regulon AM354_RS25640 SM00448 cheY-homologous receiver domain AM354_RS25645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM354_RS25645 SM00387 Histidine kinase-like ATPases AM354_RS25655 SM00862 Transcriptional regulatory protein, C terminal AM354_RS25715 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM354_RS25745 SM00849 Metallo-beta-lactamase superfamily AM354_RS25800 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM354_RS25855 SM00257 Lysin motif AM354_RS25855 SM00749 bacterial OsmY and nodulation domain AM354_RS25870 SM00342 helix_turn_helix, arabinose operon control protein AM354_RS25925 SM00849 Metallo-beta-lactamase superfamily AM354_RS25935 SM00357 Cold shock protein domain AM354_RS25975 SM00116 Domain in cystathionine beta-synthase and other proteins. AM354_RS25975 SM01091 Transporter associated domain AM354_RS25980 SM00052 Putative diguanylate phosphodiesterase AM354_RS26015 SM00357 Cold shock protein domain AM354_RS26020 SM00487 DEAD-like helicases superfamily AM354_RS26020 SM00490 helicase superfamily c-terminal domain AM354_RS26030 SM01022 AM354_RS26030 AM354_RS26085 SM00836 DALR anticodon binding domain AM354_RS26085 SM01016 Arginyl tRNA synthetase N terminal dom AM354_RS26160 SM00966 SpoVT / AbrB like domain AM354_RS26165 SM00857 Resolvase, N terminal domain AM354_RS26170 SM00857 Resolvase, N terminal domain AM354_RS26200 SM00318 Staphylococcal nuclease homologues