A4U88_RS00005 PF00308 Bacterial dnaA protein A4U88_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix A4U88_RS00005 PF11638 DnaA N-terminal domain A4U88_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain A4U88_RS00010 PF02767 DNA polymerase III beta subunit, central domain A4U88_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain A4U88_RS00015 PF02463 RecF/RecN/SMC N terminal domain A4U88_RS00020 PF00204 DNA gyrase B A4U88_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus A4U88_RS00020 PF01751 Toprim domain A4U88_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS00025 PF08282 haloacid dehalogenase-like hydrolase A4U88_RS00030 PF02423 Ornithine cyclodeaminase/mu-crystallin family A4U88_RS00035 PF00291 Pyridoxal-phosphate dependent enzyme A4U88_RS00040 PF07676 WD40-like Beta Propeller Repeat A4U88_RS00040 PF12566 A4U88_RS00040 A4U88_RS00045 PF07119 A4U88_RS00045 A4U88_RS00050 PF00011 Hsp20/alpha crystallin family A4U88_RS00055 PF00011 Hsp20/alpha crystallin family A4U88_RS00060 PF02080 TrkA-C domain A4U88_RS00060 PF06826 A4U88_RS00060 A4U88_RS00065 PF01850 PIN domain A4U88_RS00070 PF01402 Ribbon-helix-helix protein, copG family A4U88_RS00075 PF00155 Aminotransferase class I and II A4U88_RS00080 PF00128 Alpha amylase, catalytic domain A4U88_RS00085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4U88_RS00085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4U88_RS00090 PF07690 Major Facilitator Superfamily A4U88_RS00095 PF00294 pfkB family carbohydrate kinase A4U88_RS00110 PF00691 OmpA family A4U88_RS00110 PF13488 A4U88_RS00110 A4U88_RS00115 PF13673 Acetyltransferase (GNAT) domain A4U88_RS00120 PF03352 Methyladenine glycosylase A4U88_RS00125 PF00657 GDSL-like Lipase/Acylhydrolase A4U88_RS00125 PF03797 Autotransporter beta-domain A4U88_RS00130 PF02091 Glycyl-tRNA synthetase alpha subunit A4U88_RS00135 PF02092 A4U88_RS00135 A4U88_RS00135 PF05746 DALR anticodon binding domain A4U88_RS00140 PF11254 A4U88_RS00140 A4U88_RS00145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A4U88_RS00145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A4U88_RS00145 PF02378 Phosphotransferase system, EIIC A4U88_RS00150 PF01232 Mannitol dehydrogenase Rossmann domain A4U88_RS00150 PF08125 Mannitol dehydrogenase C-terminal domain A4U88_RS00155 PF05068 Mannitol repressor A4U88_RS00160 PF01810 A4U88_RS00160 A4U88_RS00165 PF00155 Aminotransferase class I and II A4U88_RS00165 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS00170 PF10928 Protein of unknown function (DUF2810) A4U88_RS00175 PF08241 Methyltransferase domain A4U88_RS00180 PF03473 MOSC domain A4U88_RS00180 PF03475 3-alpha domain A4U88_RS00185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A4U88_RS00185 PF00672 HAMP domain A4U88_RS00185 PF16591 A4U88_RS00185 A4U88_RS00190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A4U88_RS00190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A4U88_RS00195 PF00384 Molybdopterin oxidoreductase A4U88_RS00195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A4U88_RS00200 PF00384 Molybdopterin oxidoreductase A4U88_RS00200 PF01568 Molydopterin dinucleotide binding domain A4U88_RS00205 PF09163 Formate dehydrogenase N, transmembrane A4U88_RS00205 PF13247 4Fe-4S dicluster domain A4U88_RS00210 PF01292 Prokaryotic cytochrome b561 A4U88_RS00215 PF04216 Protein involved in formate dehydrogenase formation A4U88_RS00220 PF08786 Domain of unknown function (DUF1795) A4U88_RS00225 PF00043 Glutathione S-transferase, C-terminal domain A4U88_RS00225 PF13417 Glutathione S-transferase, N-terminal domain A4U88_RS00230 PF03841 L-seryl-tRNA selenium transferase A4U88_RS00230 PF12390 A4U88_RS00230 A4U88_RS00240 PF01402 Ribbon-helix-helix protein, copG family A4U88_RS00245 PF05016 Plasmid stabilisation system protein A4U88_RS00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS00250 PF03466 LysR substrate binding domain A4U88_RS00260 PF07690 Major Facilitator Superfamily A4U88_RS00265 PF01757 A4U88_RS00265 A4U88_RS00270 PF01965 DJ-1/PfpI family A4U88_RS00270 PF12833 Helix-turn-helix domain A4U88_RS00275 PF00857 Isochorismatase family A4U88_RS00280 PF07969 Amidohydrolase family A4U88_RS00285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS00285 PF03466 LysR substrate binding domain A4U88_RS00290 PF07690 Major Facilitator Superfamily A4U88_RS00295 PF13449 Esterase-like activity of phytase A4U88_RS00300 PF03526 A4U88_RS00300 A4U88_RS00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS00305 PF03466 LysR substrate binding domain A4U88_RS00310 PF07690 Major Facilitator Superfamily A4U88_RS00320 PF02321 Outer membrane efflux protein A4U88_RS00325 PF04954 Siderophore-interacting protein A4U88_RS00325 PF08021 Siderophore-interacting FAD-binding domain A4U88_RS00330 PF00582 Universal stress protein family A4U88_RS00335 PF06127 A4U88_RS00335 A4U88_RS00340 PF01909 Nucleotidyltransferase domain A4U88_RS00345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4U88_RS00350 PF07690 Major Facilitator Superfamily A4U88_RS00355 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS00360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A4U88_RS00360 PF00367 phosphotransferase system, EIIB A4U88_RS00360 PF02378 Phosphotransferase system, EIIC A4U88_RS00365 PF00232 Glycosyl hydrolase family 1 A4U88_RS00370 PF04966 Carbohydrate-selective porin, OprB family A4U88_RS00375 PF13328 HD domain A4U88_RS00380 PF01047 MarR family A4U88_RS00385 PF02566 OsmC-like protein A4U88_RS00390 PF00884 Sulfatase A4U88_RS00390 PF08019 A4U88_RS00390 A4U88_RS00395 PF00072 Response regulator receiver domain A4U88_RS00395 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS00405 PF07690 Major Facilitator Superfamily A4U88_RS00425 PF00704 Glycosyl hydrolases family 18 A4U88_RS00425 PF08329 Chitinase A, N-terminal domain A4U88_RS00430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS00435 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS00440 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS00440 PF12911 A4U88_RS00440 A4U88_RS00445 PF00005 ABC transporter A4U88_RS00445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U88_RS00450 PF00005 ABC transporter A4U88_RS00450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U88_RS00455 PF11658 A4U88_RS00455 A4U88_RS00460 PF11120 A4U88_RS00460 A4U88_RS00470 PF10945 A4U88_RS00470 A4U88_RS00475 PF06564 YhjQ protein A4U88_RS00480 PF00535 Glycosyl transferase family 2 A4U88_RS00480 PF07238 PilZ domain A4U88_RS00485 PF03170 Bacterial cellulose synthase subunit A4U88_RS00490 PF01270 Glycosyl hydrolases family 8 A4U88_RS00500 PF00563 EAL domain A4U88_RS00500 PF00672 HAMP domain A4U88_RS00500 PF00990 GGDEF domain A4U88_RS00500 PF17154 A4U88_RS00500 A4U88_RS00505 PF00375 Sodium:dicarboxylate symporter family A4U88_RS00510 PF00675 Insulinase (Peptidase family M16) A4U88_RS00510 PF05193 Peptidase M16 inactive domain A4U88_RS00515 PF13616 PPIC-type PPIASE domain A4U88_RS00520 PF00580 UvrD/REP helicase N-terminal domain A4U88_RS00520 PF13361 UvrD-like helicase C-terminal domain A4U88_RS00525 PF02541 Ppx/GppA phosphatase family A4U88_RS00530 PF00270 DEAD/DEAH box helicase A4U88_RS00530 PF00271 Helicase conserved C-terminal domain A4U88_RS00535 PF00085 Thioredoxin A4U88_RS00540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4U88_RS00540 PF07497 Rho termination factor, RNA-binding domain A4U88_RS00540 PF07498 Rho termination factor, N-terminal domain A4U88_RS00545 PF00953 Glycosyl transferase family 4 A4U88_RS00550 PF02706 Chain length determinant protein A4U88_RS00555 PF02350 UDP-N-acetylglucosamine 2-epimerase A4U88_RS00560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A4U88_RS00560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A4U88_RS00560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A4U88_RS00565 PF16363 A4U88_RS00565 A4U88_RS00570 PF00483 Nucleotidyl transferase A4U88_RS00575 PF00583 Acetyltransferase (GNAT) family A4U88_RS00580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A4U88_RS00585 PF01943 A4U88_RS00585 A4U88_RS00590 PF07429 A4U88_RS00590 A4U88_RS00595 PF06899 A4U88_RS00595 A4U88_RS00600 PF03808 A4U88_RS00600 A4U88_RS00605 PF00324 Amino acid permease A4U88_RS00630 PF07219 A4U88_RS00630 A4U88_RS00635 PF04375 A4U88_RS00635 A4U88_RS00640 PF02602 Uroporphyrinogen-III synthase HemD A4U88_RS00645 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A4U88_RS00645 PF03900 Porphobilinogen deaminase, C-terminal domain A4U88_RS00650 PF01295 A4U88_RS00650 A4U88_RS00650 PF12633 A4U88_RS00650 A4U88_RS00655 PF01491 Frataxin-like domain A4U88_RS00660 PF13627 A4U88_RS00660 A4U88_RS00665 PF01678 Diaminopimelate epimerase A4U88_RS00670 PF04340 Protein of unknown function, DUF484 A4U88_RS00675 PF00589 Phage integrase family A4U88_RS00675 PF02899 Phage integrase, N-terminal SAM-like domain A4U88_RS00680 PF00702 haloacid dehalogenase-like hydrolase A4U88_RS00685 PF00580 UvrD/REP helicase N-terminal domain A4U88_RS00685 PF13361 UvrD-like helicase C-terminal domain A4U88_RS00700 PF01544 CorA-like Mg2+ transporter protein A4U88_RS00705 PF00892 EamA-like transporter family A4U88_RS00710 PF03061 Thioesterase superfamily A4U88_RS00715 PF02253 Phospholipase A1 A4U88_RS00720 PF00270 DEAD/DEAH box helicase A4U88_RS00720 PF00271 Helicase conserved C-terminal domain A4U88_RS00720 PF00570 HRDC domain A4U88_RS00720 PF09382 RQC domain A4U88_RS00720 PF16124 A4U88_RS00720 A4U88_RS00725 PF01810 A4U88_RS00725 A4U88_RS00730 PF01810 A4U88_RS00730 A4U88_RS00735 PF12146 Putative lysophospholipase A4U88_RS00740 PF08282 haloacid dehalogenase-like hydrolase A4U88_RS00745 PF03009 Glycerophosphoryl diester phosphodiesterase family A4U88_RS00750 PF07690 Major Facilitator Superfamily A4U88_RS00760 PF01266 FAD dependent oxidoreductase A4U88_RS00760 PF04324 BFD-like [2Fe-2S] binding domain A4U88_RS00765 PF00890 FAD binding domain A4U88_RS00770 PF02754 A4U88_RS00770 A4U88_RS00770 PF13183 4Fe-4S dicluster domain A4U88_RS00775 PF08786 Domain of unknown function (DUF1795) A4U88_RS00785 PF02592 A4U88_RS00785 A4U88_RS00790 PF01206 Sulfurtransferase TusA A4U88_RS00795 PF00122 E1-E2 ATPase A4U88_RS00795 PF00403 Heavy-metal-associated domain A4U88_RS00795 PF00702 haloacid dehalogenase-like hydrolase A4U88_RS00800 PF00413 Matrixin A4U88_RS00800 PF08548 Peptidase M10 serralysin C terminal A4U88_RS00805 PF02974 Protease inhibitor Inh A4U88_RS00810 PF07947 A4U88_RS00810 A4U88_RS00815 PF10694 Protein of unknown function (DUF2500) A4U88_RS00820 PF06611 A4U88_RS00820 A4U88_RS00825 PF03602 Conserved hypothetical protein 95 A4U88_RS00830 PF00448 SRP54-type protein, GTPase domain A4U88_RS00830 PF02881 SRP54-type protein, helical bundle domain A4U88_RS00835 PF00005 ABC transporter A4U88_RS00840 PF02687 A4U88_RS00840 A4U88_RS00845 PF00140 Sigma-70 factor, region 1 A4U88_RS00845 PF04542 Sigma-70 region 2 A4U88_RS00845 PF04545 Sigma-70, region 4 A4U88_RS00855 PF11340 A4U88_RS00855 A4U88_RS00860 PF12568 Acetyltransferase (GNAT) domain A4U88_RS00865 PF13458 Periplasmic binding protein A4U88_RS00870 PF02653 A4U88_RS00870 A4U88_RS00875 PF02653 A4U88_RS00875 A4U88_RS00875 PF11862 A4U88_RS00875 A4U88_RS00880 PF00005 ABC transporter A4U88_RS00880 PF12399 Branched-chain amino acid ATP-binding cassette transporter A4U88_RS00885 PF00005 ABC transporter A4U88_RS00890 PF00155 Aminotransferase class I and II A4U88_RS00895 PF13416 Bacterial extracellular solute-binding protein A4U88_RS00900 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS00905 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS00910 PF00005 ABC transporter A4U88_RS00910 PF08402 TOBE domain A4U88_RS00915 PF03009 Glycerophosphoryl diester phosphodiesterase family A4U88_RS00920 PF03547 A4U88_RS00920 A4U88_RS00930 PF00892 EamA-like transporter family A4U88_RS00935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS00935 PF03466 LysR substrate binding domain A4U88_RS00940 PF01717 Cobalamin-independent synthase, Catalytic domain A4U88_RS00940 PF08267 Cobalamin-independent synthase, N-terminal domain A4U88_RS00945 PF13304 AAA domain A4U88_RS00950 PF01738 Dienelactone hydrolase family A4U88_RS00955 PF01048 Phosphorylase superfamily A4U88_RS00960 PF13350 Tyrosine phosphatase family A4U88_RS00965 PF09335 A4U88_RS00965 A4U88_RS00970 PF02646 A4U88_RS00970 A4U88_RS00975 PF01209 ubiE/COQ5 methyltransferase family A4U88_RS00980 PF02036 SCP-2 sterol transfer family A4U88_RS00985 PF03109 A4U88_RS00985 A4U88_RS00990 PF02416 mttA/Hcf106 family A4U88_RS01005 PF01026 TatD related DNase A4U88_RS01010 PF00490 Delta-aminolevulinic acid dehydratase A4U88_RS01015 PF02357 Transcription termination factor nusG A4U88_RS01020 PF03575 Peptidase family S51 A4U88_RS01025 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A4U88_RS01030 PF00175 Oxidoreductase NAD-binding domain A4U88_RS01030 PF00970 Oxidoreductase FAD-binding domain A4U88_RS01035 PF00108 Thiolase, N-terminal domain A4U88_RS01035 PF02803 Thiolase, C-terminal domain A4U88_RS01040 PF00378 Enoyl-CoA hydratase/isomerase family A4U88_RS01040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U88_RS01040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U88_RS01045 PF07690 Major Facilitator Superfamily A4U88_RS01050 PF00557 Metallopeptidase family M24 A4U88_RS01055 PF01205 Uncharacterized protein family UPF0029 A4U88_RS01055 PF09186 Domain of unknown function (DUF1949) A4U88_RS01065 PF12724 Flavodoxin domain A4U88_RS01090 PF01565 FAD binding domain A4U88_RS01090 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A4U88_RS01095 PF02237 Biotin protein ligase C terminal domain A4U88_RS01095 PF03099 Biotin/lipoate A/B protein ligase family A4U88_RS01095 PF08279 HTH domain A4U88_RS01100 PF00485 Phosphoribulokinase / Uridine kinase family A4U88_RS01105 PF13673 Acetyltransferase (GNAT) domain A4U88_RS01135 PF00009 Elongation factor Tu GTP binding domain A4U88_RS01135 PF03143 Elongation factor Tu C-terminal domain A4U88_RS01135 PF03144 Elongation factor Tu domain 2 A4U88_RS01140 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A4U88_RS01145 PF00467 KOW motif A4U88_RS01145 PF02357 Transcription termination factor nusG A4U88_RS01150 PF00298 Ribosomal protein L11, RNA binding domain A4U88_RS01150 PF03946 Ribosomal protein L11, N-terminal domain A4U88_RS01155 PF00687 Ribosomal protein L1p/L10e family A4U88_RS01160 PF00466 Ribosomal protein L10 A4U88_RS01165 PF00542 Ribosomal protein L7/L12 C-terminal domain A4U88_RS01165 PF16320 A4U88_RS01165 A4U88_RS01170 PF00562 RNA polymerase Rpb2, domain 6 A4U88_RS01170 PF04560 RNA polymerase Rpb2, domain 7 A4U88_RS01170 PF04561 RNA polymerase Rpb2, domain 2 A4U88_RS01170 PF04563 RNA polymerase beta subunit A4U88_RS01170 PF04565 RNA polymerase Rpb2, domain 3 A4U88_RS01170 PF10385 RNA polymerase beta subunit external 1 domain A4U88_RS01175 PF00623 RNA polymerase Rpb1, domain 2 A4U88_RS01175 PF04983 RNA polymerase Rpb1, domain 3 A4U88_RS01175 PF04997 RNA polymerase Rpb1, domain 1 A4U88_RS01175 PF04998 RNA polymerase Rpb1, domain 5 A4U88_RS01175 PF05000 RNA polymerase Rpb1, domain 4 A4U88_RS01180 PF00583 Acetyltransferase (GNAT) family A4U88_RS01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS01195 PF00072 Response regulator receiver domain A4U88_RS01195 PF08667 BetR domain A4U88_RS01200 PF04055 Radical SAM superfamily A4U88_RS01200 PF06968 Biotin and Thiamin Synthesis associated domain A4U88_RS01205 PF05690 Thiazole biosynthesis protein ThiG A4U88_RS01210 PF02597 ThiS family A4U88_RS01215 PF00899 ThiF family A4U88_RS01220 PF02581 Thiamine monophosphate synthase/TENI A4U88_RS01225 PF01964 ThiC family A4U88_RS01225 PF13667 ThiC-associated domain A4U88_RS01230 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ A4U88_RS01235 PF00293 NUDIX domain A4U88_RS01235 PF09297 NADH pyrophosphatase zinc ribbon domain A4U88_RS01240 PF01208 Uroporphyrinogen decarboxylase (URO-D) A4U88_RS01245 PF04493 Endonuclease V A4U88_RS01250 PF04222 Protein of unknown function (DUF416) A4U88_RS01255 PF00216 Bacterial DNA-binding protein A4U88_RS01260 PF07356 A4U88_RS01260 A4U88_RS01265 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A4U88_RS01265 PF02843 Phosphoribosylglycinamide synthetase, C domain A4U88_RS01265 PF02844 Phosphoribosylglycinamide synthetase, N domain A4U88_RS01270 PF01808 AICARFT/IMPCHase bienzyme A4U88_RS01270 PF02142 MGS-like domain A4U88_RS01305 PF00474 Sodium:solute symporter family A4U88_RS01310 PF04341 A4U88_RS01310 A4U88_RS01320 PF00375 Sodium:dicarboxylate symporter family A4U88_RS01325 PF00668 Condensation domain A4U88_RS01335 PF00668 Condensation domain A4U88_RS01335 PF08415 A4U88_RS01335 A4U88_RS01340 PF00593 TonB dependent receptor A4U88_RS01340 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS01345 PF00550 Phosphopantetheine attachment site A4U88_RS01345 PF00668 Condensation domain A4U88_RS01355 PF00593 TonB dependent receptor A4U88_RS01355 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS01360 PF00756 Putative esterase A4U88_RS01360 PF11806 Domain of unknown function (DUF3327) A4U88_RS01365 PF03621 MbtH-like protein A4U88_RS01370 PF00501 AMP-binding enzyme A4U88_RS01370 PF00550 Phosphopantetheine attachment site A4U88_RS01370 PF00668 Condensation domain A4U88_RS01370 PF00975 Thioesterase domain A4U88_RS01370 PF13193 AMP-binding enzyme C-terminal domain A4U88_RS01375 PF05977 Transmembrane secretion effector A4U88_RS01380 PF00425 chorismate binding enzyme A4U88_RS01385 PF00501 AMP-binding enzyme A4U88_RS01385 PF13193 AMP-binding enzyme C-terminal domain A4U88_RS01390 PF00550 Phosphopantetheine attachment site A4U88_RS01390 PF00857 Isochorismatase family A4U88_RS01395 PF13360 PQQ-like domain A4U88_RS01400 PF09997 A4U88_RS01400 A4U88_RS01405 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS01415 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS01420 PF00419 Fimbrial protein A4U88_RS01430 PF00577 Outer membrane usher protein A4U88_RS01430 PF13953 PapC C-terminal domain A4U88_RS01430 PF13954 PapC N-terminal domain A4U88_RS01435 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS01435 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U88_RS01445 PF00419 Fimbrial protein A4U88_RS01450 PF00419 Fimbrial protein A4U88_RS01460 PF00419 Fimbrial protein A4U88_RS01465 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS01475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS01475 PF03466 LysR substrate binding domain A4U88_RS01480 PF07690 Major Facilitator Superfamily A4U88_RS01490 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS01495 PF02683 A4U88_RS01495 A4U88_RS01495 PF11412 Disulphide bond corrector protein DsbC A4U88_RS01495 PF13899 Thioredoxin-like A4U88_RS01500 PF03091 CutA1 divalent ion tolerance protein A4U88_RS01510 PF00206 Lyase A4U88_RS01510 PF10415 Fumarase C C-terminus A4U88_RS01515 PF04186 A4U88_RS01515 A4U88_RS01520 PF00166 Chaperonin 10 Kd subunit A4U88_RS01525 PF00118 TCP-1/cpn60 chaperonin family A4U88_RS01530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A4U88_RS01530 PF00672 HAMP domain A4U88_RS01530 PF02203 Tar ligand binding domain homologue A4U88_RS01535 PF13698 A4U88_RS01535 A4U88_RS01540 PF04055 Radical SAM superfamily A4U88_RS01540 PF13353 4Fe-4S single cluster domain A4U88_RS01545 PF01132 Elongation factor P (EF-P) OB domain A4U88_RS01545 PF08207 Elongation factor P (EF-P) KOW-like domain A4U88_RS01545 PF09285 Elongation factor P, C-terminal A4U88_RS01550 PF08085 A4U88_RS01550 A4U88_RS01555 PF08085 A4U88_RS01555 A4U88_RS01560 PF00893 Small Multidrug Resistance protein A4U88_RS01565 PF08212 Lipocalin-like domain A4U88_RS01575 PF02300 Fumarate reductase subunit C A4U88_RS01580 PF13085 2Fe-2S iron-sulfur cluster binding domain A4U88_RS01580 PF13183 4Fe-4S dicluster domain A4U88_RS01590 PF00152 tRNA synthetases class II (D, K and N) A4U88_RS01595 PF00924 Mechanosensitive ion channel A4U88_RS01595 PF12794 A4U88_RS01595 A4U88_RS01595 PF12795 A4U88_RS01595 A4U88_RS01600 PF02666 A4U88_RS01600 A4U88_RS01605 PF03193 Protein of unknown function, DUF258 A4U88_RS01610 PF00929 Exonuclease A4U88_RS01630 PF08331 A4U88_RS01630 A4U88_RS01630 PF13484 A4U88_RS01630 A4U88_RS01635 PF01256 Carbohydrate kinase A4U88_RS01635 PF03853 YjeF-related protein N-terminus A4U88_RS01640 PF02367 Uncharacterised P-loop hydrolase UPF0079 A4U88_RS01645 PF01476 LysM domain A4U88_RS01645 PF01520 N-acetylmuramoyl-L-alanine amidase A4U88_RS01645 PF11741 AMIN domain A4U88_RS01650 PF01119 DNA mismatch repair protein, C-terminal domain A4U88_RS01650 PF08676 MutL C terminal dimerisation domain A4U88_RS01650 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS01655 PF01715 IPP transferase A4U88_RS01670 PF01145 SPFH domain / Band 7 family A4U88_RS01670 PF12221 A4U88_RS01670 A4U88_RS01675 PF01145 SPFH domain / Band 7 family A4U88_RS01680 PF09838 A4U88_RS01680 A4U88_RS01685 PF00709 Adenylosuccinate synthetase A4U88_RS01690 PF02082 Transcriptional regulator A4U88_RS01695 PF00575 S1 RNA binding domain A4U88_RS01695 PF00773 RNB domain A4U88_RS01695 PF08206 Ribonuclease B OB domain A4U88_RS01695 PF08461 Ribonuclease R winged-helix domain A4U88_RS01700 PF00588 SpoU rRNA Methylase family A4U88_RS01700 PF08032 RNA 2'-O ribose methyltransferase substrate binding A4U88_RS01705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U88_RS01705 PF02770 Acyl-CoA dehydrogenase, middle domain A4U88_RS01710 PF03994 A4U88_RS01710 A4U88_RS01715 PF07338 Protein of unknown function (DUF1471) A4U88_RS01720 PF07338 Protein of unknown function (DUF1471) A4U88_RS01735 PF07338 Protein of unknown function (DUF1471) A4U88_RS01740 PF01250 Ribosomal protein S6 A4U88_RS01745 PF00436 Single-strand binding protein family A4U88_RS01750 PF01084 Ribosomal protein S18 A4U88_RS01755 PF01281 Ribosomal protein L9, N-terminal domain A4U88_RS01755 PF03948 Ribosomal protein L9, C-terminal domain A4U88_RS01760 PF04343 A4U88_RS01760 A4U88_RS01765 PF04225 Opacity-associated protein A LysM-like domain A4U88_RS01765 PF08525 A4U88_RS01765 A4U88_RS01770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U88_RS01770 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A4U88_RS01775 PF00149 Calcineurin-like phosphoesterase A4U88_RS01775 PF02872 5'-nucleotidase, C-terminal domain A4U88_RS01780 PF00459 Inositol monophosphatase family A4U88_RS01785 PF09695 A4U88_RS01785 A4U88_RS01790 PF06526 Protein of unknown function (DUF1107) A4U88_RS01795 PF00571 CBS domain A4U88_RS01795 PF01595 A4U88_RS01795 A4U88_RS01795 PF03471 Transporter associated domain A4U88_RS01800 PF01625 Peptide methionine sulfoxide reductase A4U88_RS01810 PF04357 A4U88_RS01810 A4U88_RS01815 PF06094 AIG2-like family A4U88_RS01820 PF00719 Inorganic pyrophosphatase A4U88_RS01825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A4U88_RS01825 PF00672 HAMP domain A4U88_RS01825 PF02203 Tar ligand binding domain homologue A4U88_RS01830 PF00316 Fructose-1-6-bisphosphatase A4U88_RS01835 PF01225 Mur ligase family, catalytic domain A4U88_RS01835 PF02875 Mur ligase family, glutamate ligase domain A4U88_RS01835 PF08245 Mur ligase middle domain A4U88_RS01840 PF07338 Protein of unknown function (DUF1471) A4U88_RS01845 PF07338 Protein of unknown function (DUF1471) A4U88_RS01850 PF01316 Arginine repressor, DNA binding domain A4U88_RS01850 PF02863 Arginine repressor, C-terminal domain A4U88_RS01860 PF13693 Winged helix-turn-helix DNA-binding A4U88_RS01865 PF02316 Mu DNA-binding domain A4U88_RS01870 PF00348 Polyprenyl synthetase A4U88_RS01875 PF00829 Ribosomal prokaryotic L21 protein A4U88_RS01880 PF01016 Ribosomal L27 protein A4U88_RS01885 PF00892 EamA-like transporter family A4U88_RS01890 PF01018 GTP1/OBG A4U88_RS01890 PF01926 50S ribosome-binding GTPase A4U88_RS01895 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS01895 PF00672 HAMP domain A4U88_RS01895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS01900 PF00072 Response regulator receiver domain A4U88_RS01900 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS01905 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family A4U88_RS01910 PF01272 Transcription elongation factor, GreA/GreB, C-term A4U88_RS01910 PF03449 Transcription elongation factor, N-terminal A4U88_RS01915 PF01985 CRS1 / YhbY (CRM) domain A4U88_RS01925 PF00004 ATPase family associated with various cellular activities (AAA) A4U88_RS01925 PF01434 Peptidase family M41 A4U88_RS01925 PF06480 FtsH Extracellular A4U88_RS01930 PF00809 Pterin binding enzyme A4U88_RS01935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A4U88_RS01935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A4U88_RS01935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A4U88_RS01935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A4U88_RS01940 PF03840 Preprotein translocase SecG subunit A4U88_RS01955 PF02576 Uncharacterised BCR, YhbC family COG0779 A4U88_RS01965 PF00009 Elongation factor Tu GTP binding domain A4U88_RS01965 PF04760 Translation initiation factor IF-2, N-terminal region A4U88_RS01965 PF08364 A4U88_RS01965 A4U88_RS01965 PF11987 Translation-initiation factor 2 A4U88_RS01970 PF02033 Ribosome-binding factor A A4U88_RS01975 PF01509 TruB family pseudouridylate synthase (N terminal domain) A4U88_RS01975 PF09157 Pseudouridine synthase II TruB, C-terminal A4U88_RS01975 PF16198 A4U88_RS01975 A4U88_RS01980 PF00312 Ribosomal protein S15 A4U88_RS01985 PF00013 KH domain A4U88_RS01985 PF00575 S1 RNA binding domain A4U88_RS01985 PF01138 3' exoribonuclease family, domain 1 A4U88_RS01985 PF03725 3' exoribonuclease family, domain 2 A4U88_RS01985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A4U88_RS01990 PF07719 Tetratricopeptide repeat A4U88_RS01990 PF13181 Tetratricopeptide repeat A4U88_RS01995 PF00270 DEAD/DEAH box helicase A4U88_RS01995 PF00271 Helicase conserved C-terminal domain A4U88_RS01995 PF03880 DbpA RNA binding domain A4U88_RS01995 PF12343 A4U88_RS01995 A4U88_RS02000 PF04143 A4U88_RS02000 A4U88_RS02005 PF01206 Sulfurtransferase TusA A4U88_RS02010 PF00296 Luciferase-like monooxygenase A4U88_RS02015 PF16576 A4U88_RS02015 A4U88_RS02020 PF12698 ABC-2 family transporter protein A4U88_RS02025 PF12698 ABC-2 family transporter protein A4U88_RS02030 PF01136 A4U88_RS02030 A4U88_RS02035 PF01136 A4U88_RS02035 A4U88_RS02040 PF02036 SCP-2 sterol transfer family A4U88_RS02045 PF13508 Acetyltransferase (GNAT) domain A4U88_RS02050 PF01541 GIY-YIG catalytic domain A4U88_RS02055 PF12680 SnoaL-like domain A4U88_RS02060 PF13520 Amino acid permease A4U88_RS02070 PF10940 A4U88_RS02070 A4U88_RS02080 PF13460 NADH(P)-binding A4U88_RS02085 PF12706 Beta-lactamase superfamily domain A4U88_RS02090 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS02100 PF07969 Amidohydrolase family A4U88_RS02105 PF00005 ABC transporter A4U88_RS02110 PF00005 ABC transporter A4U88_RS02115 PF06007 A4U88_RS02115 A4U88_RS02120 PF05861 A4U88_RS02120 A4U88_RS02125 PF05845 Bacterial phosphonate metabolism protein (PhnH) A4U88_RS02130 PF06754 A4U88_RS02130 A4U88_RS02135 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS02135 PF07702 UTRA domain A4U88_RS02140 PF03773 A4U88_RS02140 A4U88_RS02145 PF04221 RelB antitoxin A4U88_RS02150 PF05016 Plasmid stabilisation system protein A4U88_RS02155 PF13353 4Fe-4S single cluster domain A4U88_RS02165 PF03477 ATP cone domain A4U88_RS02165 PF13597 Anaerobic ribonucleoside-triphosphate reductase A4U88_RS02170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS02170 PF03466 LysR substrate binding domain A4U88_RS02175 PF02525 Flavodoxin-like fold A4U88_RS02180 PF00128 Alpha amylase, catalytic domain A4U88_RS02180 PF11941 Domain of unknown function (DUF3459) A4U88_RS02185 PF00367 phosphotransferase system, EIIB A4U88_RS02185 PF02378 Phosphotransferase system, EIIC A4U88_RS02190 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS02190 PF13377 Periplasmic binding protein-like domain A4U88_RS02195 PF00122 E1-E2 ATPase A4U88_RS02195 PF00689 Cation transporting ATPase, C-terminus A4U88_RS02195 PF00690 Cation transporter/ATPase, N-terminus A4U88_RS02195 PF00702 haloacid dehalogenase-like hydrolase A4U88_RS02200 PF00728 Glycosyl hydrolase family 20, catalytic domain A4U88_RS02200 PF02838 Glycosyl hydrolase family 20, domain 2 A4U88_RS02205 PF00227 Proteasome subunit A4U88_RS02210 PF01841 Transglutaminase-like superfamily A4U88_RS02210 PF08379 A4U88_RS02210 A4U88_RS02215 PF04168 A4U88_RS02215 A4U88_RS02220 PF14403 A4U88_RS02220 A4U88_RS02225 PF01042 Endoribonuclease L-PSP A4U88_RS02230 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain A4U88_RS02230 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain A4U88_RS02235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A4U88_RS02235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A4U88_RS02240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS02245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A4U88_RS02245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A4U88_RS02250 PF06877 Regulator of ribonuclease activity B A4U88_RS02255 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) A4U88_RS02260 PF00732 GMC oxidoreductase A4U88_RS02260 PF05199 GMC oxidoreductase A4U88_RS02265 PF00583 Acetyltransferase (GNAT) family A4U88_RS02270 PF00133 tRNA synthetases class I (I, L, M and V) A4U88_RS02270 PF08264 Anticodon-binding domain of tRNA A4U88_RS02270 PF10458 Valyl tRNA synthetase tRNA binding arm A4U88_RS02275 PF04364 DNA polymerase III chi subunit, HolC A4U88_RS02280 PF00883 Cytosol aminopeptidase family, catalytic domain A4U88_RS02280 PF02789 Cytosol aminopeptidase family, N-terminal domain A4U88_RS02285 PF03739 A4U88_RS02285 A4U88_RS02290 PF03739 A4U88_RS02290 A4U88_RS02295 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS02295 PF03472 Autoinducer binding domain A4U88_RS02310 PF13391 A4U88_RS02310 A4U88_RS02315 PF06189 A4U88_RS02315 A4U88_RS02320 PF01420 Type I restriction modification DNA specificity domain A4U88_RS02325 PF02384 N-6 DNA Methylase A4U88_RS02325 PF12161 HsdM N-terminal domain A4U88_RS02335 PF04471 Restriction endonuclease A4U88_RS02335 PF14338 A4U88_RS02335 A4U88_RS02340 PF01844 HNH endonuclease A4U88_RS02355 PF00232 Glycosyl hydrolase family 1 A4U88_RS02360 PF00367 phosphotransferase system, EIIB A4U88_RS02360 PF02378 Phosphotransferase system, EIIC A4U88_RS02365 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS02365 PF13377 Periplasmic binding protein-like domain A4U88_RS02370 PF16363 A4U88_RS02370 A4U88_RS02375 PF00483 Nucleotidyl transferase A4U88_RS02380 PF07429 A4U88_RS02380 A4U88_RS02385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A4U88_RS02390 PF01943 A4U88_RS02390 A4U88_RS02395 PF02492 CobW/HypB/UreG, nucleotide-binding domain A4U88_RS02395 PF07683 Cobalamin synthesis protein cobW C-terminal domain A4U88_RS02400 PF04328 A4U88_RS02400 A4U88_RS02405 PF02554 A4U88_RS02405 A4U88_RS02405 PF13722 A4U88_RS02405 A4U88_RS02410 PF00296 Luciferase-like monooxygenase A4U88_RS02415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS02415 PF03466 LysR substrate binding domain A4U88_RS02420 PF02308 A4U88_RS02420 A4U88_RS02435 PF00005 ABC transporter A4U88_RS02440 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS02445 PF00982 Glycosyltransferase family 20 A4U88_RS02455 PF00120 Glutamine synthetase, catalytic domain A4U88_RS02475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS02475 PF03466 LysR substrate binding domain A4U88_RS02480 PF01144 Coenzyme A transferase A4U88_RS02490 PF00108 Thiolase, N-terminal domain A4U88_RS02490 PF02803 Thiolase, C-terminal domain A4U88_RS02495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U88_RS02495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U88_RS02505 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS02510 PF13609 Gram-negative porin A4U88_RS02515 PF02311 AraC-like ligand binding domain A4U88_RS02515 PF12833 Helix-turn-helix domain A4U88_RS02525 PF06445 GyrI-like small molecule binding domain A4U88_RS02525 PF12833 Helix-turn-helix domain A4U88_RS02530 PF03734 L,D-transpeptidase catalytic domain A4U88_RS02545 PF02472 Biopolymer transport protein ExbD/TolR A4U88_RS02550 PF03544 Gram-negative bacterial TonB protein C-terminal A4U88_RS02550 PF16031 A4U88_RS02550 A4U88_RS02555 PF00593 TonB dependent receptor A4U88_RS02555 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS02560 PF01618 A4U88_RS02560 A4U88_RS02565 PF13091 PLD-like domain A4U88_RS02570 PF03576 Peptidase family S58 A4U88_RS02575 PF13520 Amino acid permease A4U88_RS02580 PF00171 Aldehyde dehydrogenase family A4U88_RS02585 PF00202 Aminotransferase class-III A4U88_RS02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS02590 PF03466 LysR substrate binding domain A4U88_RS02595 PF00465 Iron-containing alcohol dehydrogenase A4U88_RS02600 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS02605 PF01266 FAD dependent oxidoreductase A4U88_RS02610 PF05899 Protein of unknown function (DUF861) A4U88_RS02615 PF12146 Putative lysophospholipase A4U88_RS02620 PF00850 Histone deacetylase domain A4U88_RS02630 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS02635 PF00884 Sulfatase A4U88_RS02640 PF04055 Radical SAM superfamily A4U88_RS02640 PF13353 4Fe-4S single cluster domain A4U88_RS02645 PF13520 Amino acid permease A4U88_RS02650 PF11354 A4U88_RS02650 A4U88_RS02655 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS02660 PF10703 Molybdenum cofactor biosynthesis protein F A4U88_RS02665 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS02670 PF01047 MarR family A4U88_RS02675 PF01557 Fumarylacetoacetate (FAA) hydrolase family A4U88_RS02680 PF01557 Fumarylacetoacetate (FAA) hydrolase family A4U88_RS02685 PF00171 Aldehyde dehydrogenase family A4U88_RS02690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS02695 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase A4U88_RS02700 PF01557 Fumarylacetoacetate (FAA) hydrolase family A4U88_RS02705 PF03328 HpcH/HpaI aldolase/citrate lyase family A4U88_RS02710 PF07690 Major Facilitator Superfamily A4U88_RS02715 PF02311 AraC-like ligand binding domain A4U88_RS02715 PF12833 Helix-turn-helix domain A4U88_RS02720 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal A4U88_RS02720 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal A4U88_RS02725 PF01613 Flavin reductase like domain A4U88_RS02730 PF00144 Beta-lactamase A4U88_RS02735 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS02735 PF07729 FCD domain A4U88_RS02740 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS02745 PF01557 Fumarylacetoacetate (FAA) hydrolase family A4U88_RS02750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A4U88_RS02750 PF13378 Enolase C-terminal domain-like A4U88_RS02755 PF04909 Amidohydrolase A4U88_RS02765 PF05336 Domain of unknown function (DUF718) A4U88_RS02770 PF07690 Major Facilitator Superfamily A4U88_RS02775 PF07690 Major Facilitator Superfamily A4U88_RS02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS02780 PF03466 LysR substrate binding domain A4U88_RS02785 PF07690 Major Facilitator Superfamily A4U88_RS02790 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS02795 PF00990 GGDEF domain A4U88_RS02800 PF07256 A4U88_RS02800 A4U88_RS02820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS02820 PF03466 LysR substrate binding domain A4U88_RS02825 PF00248 Aldo/keto reductase family A4U88_RS02830 PF05175 Methyltransferase small domain A4U88_RS02830 PF08468 Methyltransferase small domain N-terminal A4U88_RS02835 PF03603 DNA polymerase III psi subunit A4U88_RS02840 PF00583 Acetyltransferase (GNAT) family A4U88_RS02845 PF00009 Elongation factor Tu GTP binding domain A4U88_RS02845 PF03144 Elongation factor Tu domain 2 A4U88_RS02845 PF16658 A4U88_RS02845 A4U88_RS02850 PF04972 BON domain A4U88_RS02855 PF07043 A4U88_RS02855 A4U88_RS02865 PF01734 Patatin-like phospholipase A4U88_RS02870 PF01026 TatD related DNase A4U88_RS02875 PF01773 Na+ dependent nucleoside transporter N-terminus A4U88_RS02875 PF07662 Na+ dependent nucleoside transporter C-terminus A4U88_RS02875 PF07670 Nucleoside recognition A4U88_RS02880 PF01791 DeoC/LacD family aldolase A4U88_RS02885 PF00591 Glycosyl transferase family, a/b domain A4U88_RS02885 PF02885 Glycosyl transferase family, helical bundle domain A4U88_RS02885 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain A4U88_RS02890 PF01676 Metalloenzyme superfamily A4U88_RS02895 PF01048 Phosphorylase superfamily A4U88_RS02900 PF07804 HipA-like C-terminal domain A4U88_RS02900 PF07805 HipA-like N-terminal domain A4U88_RS02905 PF10144 A4U88_RS02905 A4U88_RS02910 PF00702 haloacid dehalogenase-like hydrolase A4U88_RS02920 PF01381 Helix-turn-helix A4U88_RS02920 PF13521 AAA domain A4U88_RS02925 PF13231 A4U88_RS02925 A4U88_RS02930 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS02930 PF13602 Zinc-binding dehydrogenase A4U88_RS02935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS02935 PF03466 LysR substrate binding domain A4U88_RS02940 PF00005 ABC transporter A4U88_RS02940 PF12848 ABC transporter A4U88_RS02945 PF00691 OmpA family A4U88_RS02950 PF00990 GGDEF domain A4U88_RS02950 PF17152 A4U88_RS02950 A4U88_RS02955 PF13689 A4U88_RS02955 A4U88_RS02960 PF01464 Transglycosylase SLT domain A4U88_RS02960 PF14718 Soluble lytic murein transglycosylase L domain A4U88_RS02965 PF01371 Trp repressor protein A4U88_RS02970 PF01931 Protein of unknown function DUF84 A4U88_RS02975 PF00300 Histidine phosphatase superfamily (branch 1) A4U88_RS02980 PF06445 GyrI-like small molecule binding domain A4U88_RS02980 PF12833 Helix-turn-helix domain A4U88_RS02985 PF05981 A4U88_RS02985 A4U88_RS02990 PF00072 Response regulator receiver domain A4U88_RS02990 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS02995 PF00588 SpoU rRNA Methylase family A4U88_RS03000 PF08254 A4U88_RS03000 A4U88_RS03005 PF00696 Amino acid kinase family A4U88_RS03005 PF00742 Homoserine dehydrogenase A4U88_RS03005 PF03447 Homoserine dehydrogenase, NAD binding domain A4U88_RS03005 PF13840 ACT domain A4U88_RS03010 PF00288 GHMP kinases N terminal domain A4U88_RS03010 PF08544 GHMP kinases C terminal A4U88_RS03015 PF00291 Pyridoxal-phosphate dependent enzyme A4U88_RS03015 PF14821 Threonine synthase N terminus A4U88_RS03020 PF03883 A4U88_RS03020 A4U88_RS03025 PF01235 A4U88_RS03025 A4U88_RS03030 PF00923 Transaldolase A4U88_RS03035 PF00994 Probable molybdopterin binding domain A4U88_RS03045 PF01184 A4U88_RS03045 A4U88_RS03050 PF00012 Hsp70 protein A4U88_RS03055 PF00226 DnaJ domain A4U88_RS03055 PF00684 DnaJ central domain A4U88_RS03055 PF01556 DnaJ C terminal domain A4U88_RS03060 PF06965 Na+/H+ antiporter 1 A4U88_RS03065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS03065 PF03466 LysR substrate binding domain A4U88_RS03070 PF01649 Ribosomal protein S20 A4U88_RS03075 PF01687 Riboflavin kinase A4U88_RS03075 PF06574 FAD synthetase A4U88_RS03080 PF00133 tRNA synthetases class I (I, L, M and V) A4U88_RS03080 PF06827 Zinc finger found in FPG and IleRS A4U88_RS03080 PF08264 Anticodon-binding domain of tRNA A4U88_RS03085 PF01252 A4U88_RS03085 A4U88_RS03090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U88_RS03095 PF02401 LytB protein A4U88_RS03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS03100 PF03466 LysR substrate binding domain A4U88_RS03105 PF05141 Pyoverdine/dityrosine biosynthesis protein A4U88_RS03110 PF02668 Taurine catabolism dioxygenase TauD, TfdA family A4U88_RS03115 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase A4U88_RS03115 PF03033 Glycosyltransferase family 28 N-terminal domain A4U88_RS03120 PF01113 Dihydrodipicolinate reductase, N-terminus A4U88_RS03120 PF05173 Dihydrodipicolinate reductase, C-terminus A4U88_RS03125 PF00117 Glutamine amidotransferase class-I A4U88_RS03125 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A4U88_RS03130 PF02142 MGS-like domain A4U88_RS03130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4U88_RS03130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4U88_RS03135 PF02525 Flavodoxin-like fold A4U88_RS03140 PF00999 Sodium/hydrogen exchanger family A4U88_RS03140 PF02254 TrkA-N domain A4U88_RS03145 PF01810 A4U88_RS03145 A4U88_RS03150 PF06738 A4U88_RS03150 A4U88_RS03155 PF12821 A4U88_RS03155 A4U88_RS03160 PF00186 Dihydrofolate reductase A4U88_RS03165 PF05787 Bacterial protein of unknown function (DUF839) A4U88_RS03170 PF00149 Calcineurin-like phosphoesterase A4U88_RS03175 PF04379 Protein of unknown function (DUF525) A4U88_RS03180 PF00398 Ribosomal RNA adenine dimethylase A4U88_RS03185 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A4U88_RS03190 PF09312 SurA N-terminal domain A4U88_RS03190 PF13616 PPIC-type PPIASE domain A4U88_RS03195 PF03968 OstA-like protein A4U88_RS03195 PF04453 Organic solvent tolerance protein A4U88_RS03200 PF00226 DnaJ domain A4U88_RS03200 PF05099 Tellurite resistance protein TerB A4U88_RS03205 PF00849 RNA pseudouridylate synthase A4U88_RS03215 PF00136 DNA polymerase family B A4U88_RS03215 PF03104 DNA polymerase family B, exonuclease domain A4U88_RS03220 PF09335 A4U88_RS03220 A4U88_RS03225 PF13710 ACT domain A4U88_RS03230 PF00205 Thiamine pyrophosphate enzyme, central domain A4U88_RS03230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U88_RS03230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U88_RS03235 PF00005 ABC transporter A4U88_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS03245 PF13343 Bacterial extracellular solute-binding protein A4U88_RS03250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS03250 PF12793 A4U88_RS03250 A4U88_RS03255 PF15894 A4U88_RS03255 A4U88_RS03260 PF07690 Major Facilitator Superfamily A4U88_RS03270 PF00694 Aconitase C-terminal domain A4U88_RS03275 PF00180 Isocitrate/isopropylmalate dehydrogenase A4U88_RS03275 PF00330 Aconitase family (aconitate hydratase) A4U88_RS03280 PF00682 HMGL-like A4U88_RS03280 PF08502 LeuA allosteric (dimerisation) domain A4U88_RS03285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS03285 PF03466 LysR substrate binding domain A4U88_RS03290 PF00501 AMP-binding enzyme A4U88_RS03295 PF00205 Thiamine pyrophosphate enzyme, central domain A4U88_RS03295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U88_RS03295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U88_RS03300 PF01842 ACT domain A4U88_RS03300 PF10369 Small subunit of acetolactate synthase A4U88_RS03305 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS03305 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A4U88_RS03310 PF06610 A4U88_RS03310 A4U88_RS03320 PF02381 MraZ protein A4U88_RS03325 PF01795 MraW methylase family A4U88_RS03330 PF04999 A4U88_RS03330 A4U88_RS03335 PF00905 Penicillin binding protein transpeptidase domain A4U88_RS03335 PF03717 Penicillin-binding Protein dimerisation domain A4U88_RS03340 PF01225 Mur ligase family, catalytic domain A4U88_RS03340 PF02875 Mur ligase family, glutamate ligase domain A4U88_RS03340 PF08245 Mur ligase middle domain A4U88_RS03345 PF01225 Mur ligase family, catalytic domain A4U88_RS03345 PF02875 Mur ligase family, glutamate ligase domain A4U88_RS03345 PF08245 Mur ligase middle domain A4U88_RS03350 PF00953 Glycosyl transferase family 4 A4U88_RS03350 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A4U88_RS03355 PF02875 Mur ligase family, glutamate ligase domain A4U88_RS03355 PF08245 Mur ligase middle domain A4U88_RS03365 PF03033 Glycosyltransferase family 28 N-terminal domain A4U88_RS03365 PF04101 Glycosyltransferase family 28 C-terminal domain A4U88_RS03370 PF01225 Mur ligase family, catalytic domain A4U88_RS03370 PF02875 Mur ligase family, glutamate ligase domain A4U88_RS03370 PF08245 Mur ligase middle domain A4U88_RS03375 PF01820 D-ala D-ala ligase N-terminus A4U88_RS03375 PF07478 D-ala D-ala ligase C-terminus A4U88_RS03380 PF03799 Cell division protein FtsQ A4U88_RS03380 PF08478 POTRA domain, FtsQ-type A4U88_RS03385 PF02491 SHS2 domain inserted in FTSA A4U88_RS03385 PF14450 Cell division protein FtsA A4U88_RS03390 PF00091 Tubulin/FtsZ family, GTPase domain A4U88_RS03390 PF12327 FtsZ family, C-terminal domain A4U88_RS03395 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A4U88_RS03400 PF05258 A4U88_RS03400 A4U88_RS03405 PF06558 A4U88_RS03405 A4U88_RS03410 PF01043 SecA preprotein cross-linking domain A4U88_RS03410 PF02810 SEC-C motif A4U88_RS03410 PF07516 SecA Wing and Scaffold domain A4U88_RS03410 PF07517 SecA DEAD-like domain A4U88_RS03415 PF00293 NUDIX domain A4U88_RS03420 PF03884 Domain of unknown function (DUF329) A4U88_RS03425 PF07072 Protein of unknown function (DUF1342) A4U88_RS03430 PF01121 Dephospho-CoA kinase A4U88_RS03435 PF00478 IMP dehydrogenase / GMP reductase domain A4U88_RS03440 PF00482 Type II secretion system (T2SS), protein F A4U88_RS03445 PF00437 Type II/IV secretion system protein A4U88_RS03450 PF00114 Pilin (bacterial filament) A4U88_RS03450 PF13633 Prokaryotic N-terminal methylation site A4U88_RS03455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A4U88_RS03455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A4U88_RS03460 PF01510 N-acetylmuramoyl-L-alanine amidase A4U88_RS03465 PF17113 A4U88_RS03465 A4U88_RS03470 PF00202 Aminotransferase class-III A4U88_RS03480 PF01521 Iron-sulphur cluster biosynthesis A4U88_RS03485 PF03458 A4U88_RS03485 A4U88_RS03490 PF01497 Periplasmic binding protein A4U88_RS03495 PF01048 Phosphorylase superfamily A4U88_RS03500 PF01966 HD domain A4U88_RS03500 PF13286 Phosphohydrolase-associated domain A4U88_RS03505 PF00595 PDZ domain (Also known as DHR or GLGF) A4U88_RS03505 PF13180 PDZ domain A4U88_RS03505 PF13365 Trypsin-like peptidase domain A4U88_RS03510 PF00072 Response regulator receiver domain A4U88_RS03510 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS03510 PF00672 HAMP domain A4U88_RS03510 PF01627 Hpt domain A4U88_RS03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS03510 PF09984 A4U88_RS03510 A4U88_RS03515 PF01938 TRAM domain A4U88_RS03515 PF05958 tRNA (Uracil-5-)-methyltransferase A4U88_RS03520 PF02824 TGS domain A4U88_RS03520 PF04607 Region found in RelA / SpoT proteins A4U88_RS03520 PF13291 ACT domain A4U88_RS03520 PF13328 HD domain A4U88_RS03530 PF00117 Glutamine amidotransferase class-I A4U88_RS03530 PF06418 CTP synthase N-terminus A4U88_RS03535 PF00113 Enolase, C-terminal TIM barrel domain A4U88_RS03535 PF03952 Enolase, N-terminal domain A4U88_RS03540 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U88_RS03550 PF01053 Cys/Met metabolism PLP-dependent enzyme A4U88_RS03555 PF00324 Amino acid permease A4U88_RS03560 PF00221 Aromatic amino acid lyase A4U88_RS03565 PF01175 Urocanase A4U88_RS03570 PF07690 Major Facilitator Superfamily A4U88_RS03575 PF04055 Radical SAM superfamily A4U88_RS03575 PF13394 4Fe-4S single cluster domain A4U88_RS03580 PF01242 6-pyruvoyl tetrahydropterin synthase A4U88_RS03585 PF00175 Oxidoreductase NAD-binding domain A4U88_RS03585 PF00258 Flavodoxin A4U88_RS03585 PF00667 FAD binding domain A4U88_RS03590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A4U88_RS03590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A4U88_RS03595 PF01507 Phosphoadenosine phosphosulfate reductase family A4U88_RS03600 PF04389 Peptidase family M28 A4U88_RS03605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A4U88_RS03605 PF10414 Sirohaem synthase dimerisation region A4U88_RS03605 PF13241 Putative NAD(P)-binding A4U88_RS03605 PF14824 Sirohaem biosynthesis protein central A4U88_RS03610 PF01507 Phosphoadenosine phosphosulfate reductase family A4U88_RS03615 PF00009 Elongation factor Tu GTP binding domain A4U88_RS03625 PF12084 A4U88_RS03625 A4U88_RS03630 PF00005 ABC transporter A4U88_RS03635 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS03640 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS03645 PF04977 Septum formation initiator A4U88_RS03650 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A4U88_RS03655 PF02542 YgbB family A4U88_RS03660 PF01142 tRNA pseudouridine synthase D (TruD) A4U88_RS03665 PF01975 Survival protein SurE A4U88_RS03670 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) A4U88_RS03675 PF01476 LysM domain A4U88_RS03675 PF01551 Peptidase family M23 A4U88_RS03680 PF00140 Sigma-70 factor, region 1 A4U88_RS03680 PF04539 Sigma-70 region 3 A4U88_RS03680 PF04542 Sigma-70 region 2 A4U88_RS03680 PF04545 Sigma-70, region 4 A4U88_RS03685 PF00488 MutS domain V A4U88_RS03685 PF01624 MutS domain I A4U88_RS03685 PF05188 MutS domain II A4U88_RS03685 PF05190 MutS family domain IV A4U88_RS03685 PF05192 MutS domain III A4U88_RS03695 PF00248 Aldo/keto reductase family A4U88_RS03700 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS03705 PF03466 LysR substrate binding domain A4U88_RS03710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A4U88_RS03715 PF02378 Phosphotransferase system, EIIC A4U88_RS03720 PF00232 Glycosyl hydrolase family 1 A4U88_RS03725 PF07883 Cupin domain A4U88_RS03725 PF12833 Helix-turn-helix domain A4U88_RS03730 PF04794 YdjC-like protein A4U88_RS03735 PF07690 Major Facilitator Superfamily A4U88_RS03745 PF00154 recA bacterial DNA recombination protein A4U88_RS03750 PF02631 RecX family A4U88_RS03760 PF02599 Global regulator protein family A4U88_RS03795 PF13419 Haloacid dehalogenase-like hydrolase A4U88_RS03800 PF09335 A4U88_RS03800 A4U88_RS03805 PF04262 Glutamate-cysteine ligase A4U88_RS03810 PF02664 S-Ribosylhomocysteinase (LuxS) A4U88_RS03815 PF00571 CBS domain A4U88_RS03815 PF01595 A4U88_RS03815 A4U88_RS03815 PF03471 Transporter associated domain A4U88_RS03820 PF01578 A4U88_RS03820 A4U88_RS03825 PF00448 SRP54-type protein, GTPase domain A4U88_RS03825 PF02881 SRP54-type protein, helical bundle domain A4U88_RS03825 PF02978 Signal peptide binding domain A4U88_RS03830 PF00886 Ribosomal protein S16 A4U88_RS03835 PF01782 RimM N-terminal domain A4U88_RS03835 PF05239 PRC-barrel domain A4U88_RS03840 PF01746 tRNA (Guanine-1)-methyltransferase A4U88_RS03845 PF01245 Ribosomal protein L19 A4U88_RS03850 PF04606 A4U88_RS03850 A4U88_RS03855 PF00959 Phage lysozyme A4U88_RS03870 PF00793 DAHP synthetase I family A4U88_RS03875 PF01817 Chorismate mutase type II A4U88_RS03875 PF02153 Prephenate dehydrogenase A4U88_RS03880 PF00800 Prephenate dehydratase A4U88_RS03880 PF01817 Chorismate mutase type II A4U88_RS03885 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A4U88_RS03890 PF13525 Outer membrane lipoprotein A4U88_RS03900 PF00849 RNA pseudouridylate synthase A4U88_RS03900 PF01479 S4 domain A4U88_RS03905 PF02578 Multi-copper polyphenol oxidoreductase laccase A4U88_RS03910 PF00004 ATPase family associated with various cellular activities (AAA) A4U88_RS03910 PF02861 Clp amino terminal domain A4U88_RS03910 PF07724 AAA domain (Cdc48 subfamily) A4U88_RS03910 PF10431 C-terminal, D2-small domain, of ClpB protein A4U88_RS03945 PF00248 Aldo/keto reductase family A4U88_RS03950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS03950 PF03466 LysR substrate binding domain A4U88_RS03960 PF03372 Endonuclease/Exonuclease/phosphatase family A4U88_RS03965 PF01464 Transglycosylase SLT domain A4U88_RS03965 PF01476 LysM domain A4U88_RS03970 PF00753 Metallo-beta-lactamase superfamily A4U88_RS03970 PF16123 A4U88_RS03970 A4U88_RS03985 PF00929 Exonuclease A4U88_RS03995 PF00593 TonB dependent receptor A4U88_RS03995 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS04000 PF04954 Siderophore-interacting protein A4U88_RS04000 PF08021 Siderophore-interacting FAD-binding domain A4U88_RS04005 PF11533 Protein of unknown function (DUF3225) A4U88_RS04010 PF01425 Amidase A4U88_RS04015 PF13318 A4U88_RS04015 A4U88_RS04020 PF01019 Gamma-glutamyltranspeptidase A4U88_RS04025 PF01380 SIS domain A4U88_RS04025 PF01418 Helix-turn-helix domain, rpiR family A4U88_RS04030 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS04035 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS04040 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS04045 PF00005 ABC transporter A4U88_RS04050 PF00266 Aminotransferase class-V A4U88_RS04055 PF01546 Peptidase family M20/M25/M40 A4U88_RS04055 PF07687 Peptidase dimerisation domain A4U88_RS04060 PF00795 Carbon-nitrogen hydrolase A4U88_RS04065 PF00155 Aminotransferase class I and II A4U88_RS04070 PF00596 Class II Aldolase and Adducin N-terminal domain A4U88_RS04080 PF03079 ARD/ARD' family A4U88_RS04085 PF01008 Initiation factor 2 subunit family A4U88_RS04095 PF01848 A4U88_RS04095 A4U88_RS04105 PF13580 SIS domain A4U88_RS04110 PF13230 Glutamine amidotransferases class-II A4U88_RS04115 PF03734 L,D-transpeptidase catalytic domain A4U88_RS04120 PF05896 A4U88_RS04120 A4U88_RS04120 PF11973 A4U88_RS04120 A4U88_RS04125 PF03116 A4U88_RS04125 A4U88_RS04130 PF04205 FMN-binding domain A4U88_RS04135 PF02508 A4U88_RS04135 A4U88_RS04140 PF02508 A4U88_RS04140 A4U88_RS04145 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS04145 PF00175 Oxidoreductase NAD-binding domain A4U88_RS04145 PF00970 Oxidoreductase FAD-binding domain A4U88_RS04150 PF02424 ApbE family A4U88_RS04155 PF04400 A4U88_RS04155 A4U88_RS04170 PF03009 Glycerophosphoryl diester phosphodiesterase family A4U88_RS04175 PF00817 impB/mucB/samB family A4U88_RS04175 PF11798 IMS family HHH motif A4U88_RS04175 PF11799 impB/mucB/samB family C-terminal domain A4U88_RS04180 PF01546 Peptidase family M20/M25/M40 A4U88_RS04180 PF07687 Peptidase dimerisation domain A4U88_RS04185 PF00156 Phosphoribosyl transferase domain A4U88_RS04190 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) A4U88_RS04195 PF07417 Transcriptional regulator Crl A4U88_RS04200 PF00696 Amino acid kinase family A4U88_RS04200 PF01472 PUA domain A4U88_RS04205 PF00171 Aldehyde dehydrogenase family A4U88_RS04210 PF01381 Helix-turn-helix A4U88_RS04215 PF13693 Winged helix-turn-helix DNA-binding A4U88_RS04230 PF16473 A4U88_RS04230 A4U88_RS04245 PF13031 A4U88_RS04245 A4U88_RS04255 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS04260 PF00419 Fimbrial protein A4U88_RS04270 PF00577 Outer membrane usher protein A4U88_RS04270 PF13953 PapC C-terminal domain A4U88_RS04270 PF13954 PapC N-terminal domain A4U88_RS04275 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS04275 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U88_RS04285 PF00419 Fimbrial protein A4U88_RS04290 PF00419 Fimbrial protein A4U88_RS04295 PF00419 Fimbrial protein A4U88_RS04300 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A4U88_RS04305 PF04932 A4U88_RS04305 A4U88_RS04305 PF11846 A4U88_RS04305 A4U88_RS04310 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS04335 PF12833 Helix-turn-helix domain A4U88_RS04340 PF12833 Helix-turn-helix domain A4U88_RS04345 PF00857 Isochorismatase family A4U88_RS04350 PF07995 Glucose / Sorbosone dehydrogenase A4U88_RS04355 PF08042 A4U88_RS04355 A4U88_RS04360 PF12706 Beta-lactamase superfamily domain A4U88_RS04365 PF03070 TENA/THI-4/PQQC family A4U88_RS04370 PF05402 Coenzyme PQQ synthesis protein D (PqqD) A4U88_RS04395 PF01292 Prokaryotic cytochrome b561 A4U88_RS04400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS04405 PF01638 HxlR-like helix-turn-helix A4U88_RS04410 PF02525 Flavodoxin-like fold A4U88_RS04435 PF01323 DSBA-like thioredoxin domain A4U88_RS04440 PF12833 Helix-turn-helix domain A4U88_RS04440 PF14525 A4U88_RS04440 A4U88_RS04445 PF00171 Aldehyde dehydrogenase family A4U88_RS04450 PF01810 A4U88_RS04450 A4U88_RS04455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A4U88_RS04455 PF02805 Metal binding domain of Ada A4U88_RS04455 PF12833 Helix-turn-helix domain A4U88_RS04465 PF03848 Tellurite resistance protein TehB A4U88_RS04465 PF09313 Domain of unknown function (DUF1971) A4U88_RS04470 PF07759 A4U88_RS04470 A4U88_RS04475 PF00205 Thiamine pyrophosphate enzyme, central domain A4U88_RS04475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U88_RS04475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U88_RS04485 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP A4U88_RS04490 PF10696 A4U88_RS04490 A4U88_RS04495 PF03891 A4U88_RS04495 A4U88_RS04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS04515 PF03466 LysR substrate binding domain A4U88_RS04525 PF00857 Isochorismatase family A4U88_RS04535 PF04134 A4U88_RS04535 A4U88_RS04545 PF13302 Acetyltransferase (GNAT) domain A4U88_RS04550 PF09849 A4U88_RS04550 A4U88_RS04555 PF13560 Helix-turn-helix domain A4U88_RS04560 PF08241 Methyltransferase domain A4U88_RS04565 PF00230 Major intrinsic protein A4U88_RS04570 PF13449 Esterase-like activity of phytase A4U88_RS04585 PF07338 Protein of unknown function (DUF1471) A4U88_RS04590 PF00398 Ribosomal RNA adenine dimethylase A4U88_RS04595 PF00583 Acetyltransferase (GNAT) family A4U88_RS04600 PF01497 Periplasmic binding protein A4U88_RS04605 PF00593 TonB dependent receptor A4U88_RS04605 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS04615 PF01202 Shikimate kinase A4U88_RS04620 PF02311 AraC-like ligand binding domain A4U88_RS04620 PF12833 Helix-turn-helix domain A4U88_RS04625 PF12680 SnoaL-like domain A4U88_RS04630 PF16362 A4U88_RS04630 A4U88_RS04635 PF04542 Sigma-70 region 2 A4U88_RS04635 PF08281 Sigma-70, region 4 A4U88_RS04645 PF00593 TonB dependent receptor A4U88_RS04645 PF07660 Secretin and TonB N terminus short domain A4U88_RS04645 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS04650 PF06438 Heme-binding protein A (HasA) A4U88_RS04655 PF00005 ABC transporter A4U88_RS04655 PF00664 ABC transporter transmembrane region A4U88_RS04660 PF00529 HlyD family secretion protein A4U88_RS04670 PF01614 Bacterial transcriptional regulator A4U88_RS04670 PF09339 IclR helix-turn-helix domain A4U88_RS04675 PF03169 A4U88_RS04675 A4U88_RS04680 PF06675 A4U88_RS04680 A4U88_RS04690 PF06865 Protein of unknown function (DUF1255) A4U88_RS04695 PF04381 Putative exonuclease, RdgC A4U88_RS04700 PF00480 ROK family A4U88_RS04705 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system A4U88_RS04710 PF01850 PIN domain A4U88_RS04715 PF00874 PRD domain A4U88_RS04715 PF03123 CAT RNA binding domain A4U88_RS04720 PF13476 AAA domain A4U88_RS04720 PF13558 Putative exonuclease SbcCD, C subunit A4U88_RS04725 PF00149 Calcineurin-like phosphoesterase A4U88_RS04725 PF12320 Type 5 capsule protein repressor C-terminal domain A4U88_RS04730 PF00072 Response regulator receiver domain A4U88_RS04730 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS04735 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS04735 PF00989 PAS fold A4U88_RS04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS04735 PF11808 A4U88_RS04735 A4U88_RS04740 PF12849 PBP superfamily domain A4U88_RS04745 PF05525 A4U88_RS04745 A4U88_RS04750 PF00324 Amino acid permease A4U88_RS04760 PF00924 Mechanosensitive ion channel A4U88_RS04765 PF00128 Alpha amylase, catalytic domain A4U88_RS04765 PF02903 Alpha amylase, N-terminal ig-like domain A4U88_RS04770 PF01019 Gamma-glutamyltranspeptidase A4U88_RS04775 PF00578 AhpC/TSA family A4U88_RS04775 PF10417 C-terminal domain of 1-Cys peroxiredoxin A4U88_RS04780 PF04336 A4U88_RS04780 A4U88_RS04790 PF01702 Queuine tRNA-ribosyltransferase A4U88_RS04795 PF02699 Preprotein translocase subunit A4U88_RS04800 PF02355 Protein export membrane protein A4U88_RS04800 PF07549 SecD/SecF GG Motif A4U88_RS04800 PF13721 SecD export protein N-terminal TM region A4U88_RS04805 PF02355 Protein export membrane protein A4U88_RS04805 PF07549 SecD/SecF GG Motif A4U88_RS04810 PF11622 Protein of unknown function (DUF3251) A4U88_RS04815 PF03477 ATP cone domain A4U88_RS04820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A4U88_RS04820 PF01872 RibD C-terminal domain A4U88_RS04830 PF01029 NusB family A4U88_RS04835 PF00586 AIR synthase related protein, N-terminal domain A4U88_RS04835 PF02769 AIR synthase related protein, C-terminal domain A4U88_RS04840 PF04608 Phosphatidylglycerophosphatase A A4U88_RS04845 PF00248 Aldo/keto reductase family A4U88_RS04850 PF02779 Transketolase, pyrimidine binding domain A4U88_RS04850 PF02780 Transketolase, C-terminal domain A4U88_RS04850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A4U88_RS04855 PF00348 Polyprenyl synthetase A4U88_RS04860 PF02609 Exonuclease VII small subunit A4U88_RS04865 PF02568 Thiamine biosynthesis protein (ThiI) A4U88_RS04865 PF02926 THUMP domain A4U88_RS04870 PF05860 haemagglutination activity domain A4U88_RS04880 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB A4U88_RS04880 PF08479 POTRA domain, ShlB-type A4U88_RS04885 PF01965 DJ-1/PfpI family A4U88_RS04890 PF02558 Ketopantoate reductase PanE/ApbA A4U88_RS04890 PF08546 Ketopantoate reductase PanE/ApbA C terminal A4U88_RS04895 PF04461 Protein of unknown function (DUF520) A4U88_RS04900 PF07690 Major Facilitator Superfamily A4U88_RS04905 PF01040 UbiA prenyltransferase family A4U88_RS04910 PF03626 A4U88_RS04910 A4U88_RS04915 PF00510 Cytochrome c oxidase subunit III A4U88_RS04920 PF00115 Cytochrome C and Quinol oxidase polypeptide I A4U88_RS04925 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A4U88_RS04925 PF06481 COX Aromatic Rich Motif A4U88_RS04930 PF07690 Major Facilitator Superfamily A4U88_RS04935 PF03923 A4U88_RS04935 A4U88_RS04940 PF01722 BolA-like protein A4U88_RS04945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U88_RS04945 PF05697 Bacterial trigger factor protein (TF) A4U88_RS04945 PF05698 Bacterial trigger factor protein (TF) C-terminus A4U88_RS04950 PF00574 Clp protease A4U88_RS04955 PF06689 ClpX C4-type zinc finger A4U88_RS04955 PF07724 AAA domain (Cdc48 subfamily) A4U88_RS04955 PF10431 C-terminal, D2-small domain, of ClpB protein A4U88_RS04965 PF00216 Bacterial DNA-binding protein A4U88_RS04970 PF13145 PPIC-type PPIASE domain A4U88_RS04970 PF13624 SurA N-terminal domain A4U88_RS04975 PF12836 Helix-hairpin-helix motif A4U88_RS04980 PF13279 Thioesterase-like superfamily A4U88_RS04985 PF06508 Queuosine biosynthesis protein QueC A4U88_RS04995 PF08282 haloacid dehalogenase-like hydrolase A4U88_RS05000 PF00291 Pyridoxal-phosphate dependent enzyme A4U88_RS05005 PF01037 AsnC family A4U88_RS05005 PF13412 Winged helix-turn-helix DNA-binding A4U88_RS05010 PF00005 ABC transporter A4U88_RS05010 PF00664 ABC transporter transmembrane region A4U88_RS05015 PF00005 ABC transporter A4U88_RS05015 PF00664 ABC transporter transmembrane region A4U88_RS05020 PF00543 Nitrogen regulatory protein P-II A4U88_RS05025 PF00909 Ammonium Transporter Family A4U88_RS05030 PF13622 Thioesterase-like superfamily A4U88_RS05035 PF09619 Type III secretion system lipoprotein chaperone (YscW) A4U88_RS05040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A4U88_RS05050 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS05050 PF13377 Periplasmic binding protein-like domain A4U88_RS05055 PF00795 Carbon-nitrogen hydrolase A4U88_RS05065 PF01425 Amidase A4U88_RS05080 PF01292 Prokaryotic cytochrome b561 A4U88_RS05085 PF05321 Haemolysin expression modulating protein A4U88_RS05090 PF10757 A4U88_RS05090 A4U88_RS05100 PF00005 ABC transporter A4U88_RS05105 PF00950 A4U88_RS05105 A4U88_RS05110 PF01297 Periplasmic solute binding protein family A4U88_RS05115 PF00444 Ribosomal protein L36 A4U88_RS05120 PF01197 Ribosomal protein L31 A4U88_RS05125 PF00873 AcrB/AcrD/AcrF family A4U88_RS05130 PF00529 HlyD family secretion protein A4U88_RS05130 PF16576 A4U88_RS05130 A4U88_RS05135 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS05135 PF08361 MAATS-type transcriptional repressor, C-terminal region A4U88_RS05140 PF02635 DsrE/DsrF-like family A4U88_RS05145 PF00924 Mechanosensitive ion channel A4U88_RS05145 PF12794 A4U88_RS05145 A4U88_RS05145 PF12795 A4U88_RS05145 A4U88_RS05150 PF10689 A4U88_RS05150 A4U88_RS05155 PF07445 Primosomal replication protein priB and priC A4U88_RS05160 PF04304 A4U88_RS05160 A4U88_RS05165 PF00156 Phosphoribosyl transferase domain A4U88_RS05170 PF12168 A4U88_RS05170 A4U88_RS05170 PF12169 DNA polymerase III subunits gamma and tau domain III A4U88_RS05170 PF12170 DNA polymerase III tau subunit V interacting with alpha A4U88_RS05170 PF13177 DNA polymerase III, delta subunit A4U88_RS05175 PF02575 YbaB/EbfC DNA-binding family A4U88_RS05180 PF02132 RecR protein A4U88_RS05180 PF13662 Toprim domain A4U88_RS05185 PF00183 Hsp90 protein A4U88_RS05185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS05195 PF00406 Adenylate kinase A4U88_RS05195 PF05191 Adenylate kinase, active site lid A4U88_RS05200 PF05651 A4U88_RS05200 A4U88_RS05200 PF13556 PucR C-terminal helix-turn-helix domain A4U88_RS05205 PF02447 A4U88_RS05205 A4U88_RS05210 PF02595 Glycerate kinase family A4U88_RS05215 PF00762 Ferrochelatase A4U88_RS05220 PF00294 pfkB family carbohydrate kinase A4U88_RS05225 PF00999 Sodium/hydrogen exchanger family A4U88_RS05225 PF02254 TrkA-N domain A4U88_RS05230 PF07690 Major Facilitator Superfamily A4U88_RS05235 PF00149 Calcineurin-like phosphoesterase A4U88_RS05235 PF02872 5'-nucleotidase, C-terminal domain A4U88_RS05240 PF02311 AraC-like ligand binding domain A4U88_RS05240 PF12833 Helix-turn-helix domain A4U88_RS05245 PF07690 Major Facilitator Superfamily A4U88_RS05250 PF00975 Thioesterase domain A4U88_RS05255 PF03301 Tryptophan 2,3-dioxygenase A4U88_RS05260 PF04199 Putative cyclase A4U88_RS05265 PF00501 AMP-binding enzyme A4U88_RS05265 PF00550 Phosphopantetheine attachment site A4U88_RS05265 PF00668 Condensation domain A4U88_RS05265 PF13193 AMP-binding enzyme C-terminal domain A4U88_RS05265 PF13745 HxxPF-repeated domain A4U88_RS05270 PF11583 P-aminobenzoate N-oxygenase AurF A4U88_RS05275 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS05280 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family A4U88_RS05285 PF04073 Aminoacyl-tRNA editing domain A4U88_RS05290 PF01963 A4U88_RS05290 A4U88_RS05295 PF00122 E1-E2 ATPase A4U88_RS05295 PF00403 Heavy-metal-associated domain A4U88_RS05295 PF00702 haloacid dehalogenase-like hydrolase A4U88_RS05300 PF06966 A4U88_RS05300 A4U88_RS05315 PF11639 REDY-like protein HapK A4U88_RS05320 PF00109 Beta-ketoacyl synthase, N-terminal domain A4U88_RS05320 PF02801 Beta-ketoacyl synthase, C-terminal domain A4U88_RS05325 PF00501 AMP-binding enzyme A4U88_RS05325 PF13193 AMP-binding enzyme C-terminal domain A4U88_RS05340 PF00891 O-methyltransferase A4U88_RS05340 PF16864 A4U88_RS05340 A4U88_RS05345 PF00202 Aminotransferase class-III A4U88_RS05360 PF01593 Flavin containing amine oxidoreductase A4U88_RS05360 PF13450 NAD(P)-binding Rossmann-like domain A4U88_RS05365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U88_RS05365 PF02770 Acyl-CoA dehydrogenase, middle domain A4U88_RS05365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U88_RS05370 PF13411 MerR HTH family regulatory protein A4U88_RS05385 PF02353 Mycolic acid cyclopropane synthetase A4U88_RS05390 PF00085 Thioredoxin A4U88_RS05390 PF14559 Tetratricopeptide repeat A4U88_RS05390 PF14561 Tetratricopeptide repeat A4U88_RS05400 PF13472 GDSL-like Lipase/Acylhydrolase family A4U88_RS05405 PF00005 ABC transporter A4U88_RS05410 PF02687 A4U88_RS05410 A4U88_RS05420 PF02222 ATP-grasp domain A4U88_RS05425 PF00731 AIR carboxylase A4U88_RS05435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A4U88_RS05440 PF01406 tRNA synthetases class I (C) catalytic domain A4U88_RS05440 PF09190 DALR domain A4U88_RS05450 PF13275 S4 domain A4U88_RS05455 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A4U88_RS05455 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A4U88_RS05475 PF12833 Helix-turn-helix domain A4U88_RS05485 PF00857 Isochorismatase family A4U88_RS05490 PF03358 NADPH-dependent FMN reductase A4U88_RS05495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS05495 PF03466 LysR substrate binding domain A4U88_RS05500 PF13231 A4U88_RS05500 A4U88_RS05505 PF03358 NADPH-dependent FMN reductase A4U88_RS05510 PF00990 GGDEF domain A4U88_RS05515 PF00313 'Cold-shock' DNA-binding domain A4U88_RS05520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS05525 PF00005 ABC transporter A4U88_RS05530 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS05535 PF00583 Acetyltransferase (GNAT) family A4U88_RS05540 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS05545 PF00296 Luciferase-like monooxygenase A4U88_RS05550 PF01546 Peptidase family M20/M25/M40 A4U88_RS05550 PF07687 Peptidase dimerisation domain A4U88_RS05555 PF00313 'Cold-shock' DNA-binding domain A4U88_RS05560 PF07690 Major Facilitator Superfamily A4U88_RS05565 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS05565 PF13977 Bacterial transcriptional repressor A4U88_RS05570 PF02537 A4U88_RS05570 A4U88_RS05575 PF00583 Acetyltransferase (GNAT) family A4U88_RS05580 PF00990 GGDEF domain A4U88_RS05580 PF05230 A4U88_RS05580 A4U88_RS05585 PF02416 mttA/Hcf106 family A4U88_RS05590 PF04055 Radical SAM superfamily A4U88_RS05590 PF16881 A4U88_RS05590 A4U88_RS05595 PF03099 Biotin/lipoate A/B protein ligase family A4U88_RS05600 PF04359 Protein of unknown function (DUF493) A4U88_RS05605 PF00768 D-alanyl-D-alanine carboxypeptidase A4U88_RS05605 PF07943 Penicillin-binding protein 5, C-terminal domain A4U88_RS05610 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel A4U88_RS05610 PF05036 Sporulation related domain A4U88_RS05615 PF01098 A4U88_RS05615 A4U88_RS05620 PF00905 Penicillin binding protein transpeptidase domain A4U88_RS05620 PF03717 Penicillin-binding Protein dimerisation domain A4U88_RS05625 PF02590 Predicted SPOUT methyltransferase A4U88_RS05630 PF02410 Oligomerisation domain A4U88_RS05635 PF01467 Cytidylyltransferase A4U88_RS05640 PF06144 DNA polymerase III, delta subunit A4U88_RS05640 PF14840 Processivity clamp loader gamma complex DNA pol III C-term A4U88_RS05645 PF04390 Lipopolysaccharide-assembly A4U88_RS05650 PF00133 tRNA synthetases class I (I, L, M and V) A4U88_RS05650 PF08264 Anticodon-binding domain of tRNA A4U88_RS05650 PF13603 Leucyl-tRNA synthetase, Domain 2 A4U88_RS05655 PF07295 A4U88_RS05655 A4U88_RS05660 PF02525 Flavodoxin-like fold A4U88_RS05665 PF01156 Inosine-uridine preferring nucleoside hydrolase A4U88_RS05670 PF00005 ABC transporter A4U88_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS05680 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS05690 PF00795 Carbon-nitrogen hydrolase A4U88_RS05695 PF00571 CBS domain A4U88_RS05695 PF03471 Transporter associated domain A4U88_RS05700 PF02130 Uncharacterized protein family UPF0054 A4U88_RS05705 PF02562 PhoH-like protein A4U88_RS05710 PF03831 PhnA protein A4U88_RS05710 PF08274 PhnA Zinc-Ribbon A4U88_RS05715 PF00919 Uncharacterized protein family UPF0004 A4U88_RS05715 PF01938 TRAM domain A4U88_RS05715 PF04055 Radical SAM superfamily A4U88_RS05720 PF01494 FAD binding domain A4U88_RS05760 PF00733 Asparagine synthase A4U88_RS05760 PF13537 Glutamine amidotransferase domain A4U88_RS05765 PF00704 Glycosyl hydrolases family 18 A4U88_RS05765 PF02839 Carbohydrate binding domain A4U88_RS05770 PF13242 HAD-hyrolase-like A4U88_RS05770 PF13344 Haloacid dehalogenase-like hydrolase A4U88_RS05775 PF00480 ROK family A4U88_RS05775 PF01047 MarR family A4U88_RS05785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A4U88_RS05790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A4U88_RS05790 PF00367 phosphotransferase system, EIIB A4U88_RS05790 PF02378 Phosphotransferase system, EIIC A4U88_RS05795 PF00749 tRNA synthetases class I (E and Q), catalytic domain A4U88_RS05795 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A4U88_RS05805 PF13982 A4U88_RS05805 A4U88_RS05810 PF00728 Glycosyl hydrolase family 20, catalytic domain A4U88_RS05810 PF02838 Glycosyl hydrolase family 20, domain 2 A4U88_RS05810 PF03173 Putative carbohydrate binding domain A4U88_RS05810 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain A4U88_RS05815 PF01475 Ferric uptake regulator family A4U88_RS05820 PF00258 Flavodoxin A4U88_RS05825 PF01402 Ribbon-helix-helix protein, copG family A4U88_RS05830 PF12697 Alpha/beta hydrolase family A4U88_RS05835 PF03925 SeqA protein A4U88_RS05840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A4U88_RS05840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A4U88_RS05840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A4U88_RS05840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A4U88_RS05845 PF03551 Transcriptional regulator PadR-like family A4U88_RS05850 PF12977 Domain of Unknown Function with PDB structure (DUF3861) A4U88_RS05855 PF00072 Response regulator receiver domain A4U88_RS05855 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS05860 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS05860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS05860 PF02702 Osmosensitive K+ channel His kinase sensor domain A4U88_RS05860 PF13492 GAF domain A4U88_RS05860 PF13493 Domain of unknown function (DUF4118) A4U88_RS05865 PF02669 A4U88_RS05865 A4U88_RS05870 PF00122 E1-E2 ATPase A4U88_RS05870 PF00702 haloacid dehalogenase-like hydrolase A4U88_RS05880 PF09604 A4U88_RS05880 A4U88_RS05885 PF10725 A4U88_RS05885 A4U88_RS05890 PF04463 A4U88_RS05890 A4U88_RS05890 PF08349 A4U88_RS05890 A4U88_RS05895 PF00875 DNA photolyase A4U88_RS05895 PF03441 FAD binding domain of DNA photolyase A4U88_RS05900 PF02112 A4U88_RS05900 A4U88_RS05905 PF01784 NIF3 (NGG1p interacting factor 3) A4U88_RS05910 PF02682 Allophanate hydrolase subunit 1 A4U88_RS05915 PF02626 Allophanate hydrolase subunit 2 A4U88_RS05920 PF03746 LamB/YcsF family A4U88_RS05925 PF06149 A4U88_RS05925 A4U88_RS05930 PF06166 A4U88_RS05930 A4U88_RS05935 PF01470 Pyroglutamyl peptidase A4U88_RS05940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A4U88_RS05940 PF06827 Zinc finger found in FPG and IleRS A4U88_RS05940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A4U88_RS05945 PF00285 Citrate synthase A4U88_RS05950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A4U88_RS05960 PF00890 FAD binding domain A4U88_RS05960 PF02910 Fumarate reductase flavoprotein C-term A4U88_RS05965 PF13085 2Fe-2S iron-sulfur cluster binding domain A4U88_RS05965 PF13534 4Fe-4S dicluster domain A4U88_RS05970 PF00676 Dehydrogenase E1 component A4U88_RS05970 PF02779 Transketolase, pyrimidine binding domain A4U88_RS05970 PF16078 A4U88_RS05970 A4U88_RS05970 PF16870 A4U88_RS05970 A4U88_RS05975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A4U88_RS05975 PF00364 Biotin-requiring enzyme A4U88_RS05975 PF02817 e3 binding domain A4U88_RS05980 PF00549 CoA-ligase A4U88_RS05980 PF08442 ATP-grasp domain A4U88_RS05985 PF00549 CoA-ligase A4U88_RS05985 PF02629 CoA binding domain A4U88_RS05990 PF00149 Calcineurin-like phosphoesterase A4U88_RS05990 PF02872 5'-nucleotidase, C-terminal domain A4U88_RS05995 PF01654 A4U88_RS05995 A4U88_RS06000 PF02322 A4U88_RS06000 A4U88_RS06005 PF08173 A4U88_RS06005 A4U88_RS06010 PF09600 A4U88_RS06010 A4U88_RS06015 PF03061 Thioesterase superfamily A4U88_RS06020 PF01618 A4U88_RS06020 A4U88_RS06025 PF02472 Biopolymer transport protein ExbD/TolR A4U88_RS06030 PF06519 TolA C-terminal A4U88_RS06035 PF04052 TolB amino-terminal domain A4U88_RS06035 PF07676 WD40-like Beta Propeller Repeat A4U88_RS06040 PF00691 OmpA family A4U88_RS06045 PF13174 Tetratricopeptide repeat A4U88_RS06045 PF13432 Tetratricopeptide repeat A4U88_RS06045 PF16331 A4U88_RS06045 A4U88_RS06095 PF04973 A4U88_RS06095 A4U88_RS06110 PF00072 Response regulator receiver domain A4U88_RS06110 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS06115 PF00793 DAHP synthetase I family A4U88_RS06120 PF05987 A4U88_RS06120 A4U88_RS06125 PF01435 Peptidase family M48 A4U88_RS06130 PF00300 Histidine phosphatase superfamily (branch 1) A4U88_RS06135 PF07769 A4U88_RS06135 A4U88_RS06140 PF01263 Aldose 1-epimerase A4U88_RS06145 PF00288 GHMP kinases N terminal domain A4U88_RS06145 PF08544 GHMP kinases C terminal A4U88_RS06145 PF10509 Galactokinase galactose-binding signature A4U88_RS06150 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain A4U88_RS06150 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain A4U88_RS06155 PF02517 CAAX protease self-immunity A4U88_RS06160 PF00857 Isochorismatase family A4U88_RS06165 PF00005 ABC transporter A4U88_RS06170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS06170 PF03459 TOBE domain A4U88_RS06175 PF00593 TonB dependent receptor A4U88_RS06175 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS06180 PF01497 Periplasmic binding protein A4U88_RS06185 PF13649 Methyltransferase domain A4U88_RS06190 PF01032 FecCD transport family A4U88_RS06195 PF00005 ABC transporter A4U88_RS06200 PF10766 Protein of unknown function (DUF2592) A4U88_RS06205 PF13531 Bacterial extracellular solute-binding protein A4U88_RS06210 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS06215 PF00005 ABC transporter A4U88_RS06215 PF03459 TOBE domain A4U88_RS06220 PF08282 haloacid dehalogenase-like hydrolase A4U88_RS06225 PF01757 A4U88_RS06225 A4U88_RS06230 PF10282 Lactonase, 7-bladed beta-propeller A4U88_RS06235 PF01161 Phosphatidylethanolamine-binding protein A4U88_RS06240 PF01545 Cation efflux family A4U88_RS06245 PF02583 Metal-sensitive transcriptional repressor A4U88_RS06250 PF06803 A4U88_RS06250 A4U88_RS06255 PF00202 Aminotransferase class-III A4U88_RS06260 PF04055 Radical SAM superfamily A4U88_RS06260 PF06968 Biotin and Thiamin Synthesis associated domain A4U88_RS06265 PF00155 Aminotransferase class I and II A4U88_RS06270 PF08241 Methyltransferase domain A4U88_RS06275 PF13500 AAA domain A4U88_RS06280 PF00005 ABC transporter A4U88_RS06285 PF00271 Helicase conserved C-terminal domain A4U88_RS06285 PF02151 UvrB/uvrC motif A4U88_RS06285 PF04851 Type III restriction enzyme, res subunit A4U88_RS06285 PF12344 Ultra-violet resistance protein B A4U88_RS06290 PF09905 Uncharacterized conserved protein (DUF2132) A4U88_RS06295 PF01933 Uncharacterised protein family UPF0052 A4U88_RS06300 PF04055 Radical SAM superfamily A4U88_RS06300 PF06463 Molybdenum Cofactor Synthesis C A4U88_RS06300 PF13353 4Fe-4S single cluster domain A4U88_RS06305 PF00994 Probable molybdopterin binding domain A4U88_RS06310 PF01967 MoaC family A4U88_RS06315 PF02597 ThiS family A4U88_RS06320 PF02391 MoaE protein A4U88_RS06325 PF01027 Inhibitor of apoptosis-promoting Bax1 A4U88_RS06330 PF12698 ABC-2 family transporter protein A4U88_RS06335 PF12698 ABC-2 family transporter protein A4U88_RS06340 PF00005 ABC transporter A4U88_RS06350 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS06350 PF09209 Domain of unknown function (DUF1956) A4U88_RS06355 PF00270 DEAD/DEAH box helicase A4U88_RS06355 PF00271 Helicase conserved C-terminal domain A4U88_RS06360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4U88_RS06360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4U88_RS06365 PF01207 Dihydrouridine synthase (Dus) A4U88_RS06375 PF00005 ABC transporter A4U88_RS06375 PF08402 TOBE domain A4U88_RS06385 PF13343 Bacterial extracellular solute-binding protein A4U88_RS06390 PF07690 Major Facilitator Superfamily A4U88_RS06395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS06395 PF05231 A4U88_RS06395 A4U88_RS06395 PF07730 Histidine kinase A4U88_RS06400 PF00072 Response regulator receiver domain A4U88_RS06400 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS06405 PF00797 N-acetyltransferase A4U88_RS06410 PF13328 HD domain A4U88_RS06415 PF03547 A4U88_RS06415 A4U88_RS06420 PF01925 A4U88_RS06420 A4U88_RS06435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS06435 PF03466 LysR substrate binding domain A4U88_RS06445 PF00324 Amino acid permease A4U88_RS06450 PF05232 A4U88_RS06450 A4U88_RS06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS06455 PF03466 LysR substrate binding domain A4U88_RS06460 PF09335 A4U88_RS06460 A4U88_RS06465 PF01965 DJ-1/PfpI family A4U88_RS06470 PF01965 DJ-1/PfpI family A4U88_RS06470 PF12833 Helix-turn-helix domain A4U88_RS06475 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A4U88_RS06475 PF05221 S-adenosyl-L-homocysteine hydrolase A4U88_RS06480 PF00768 D-alanyl-D-alanine carboxypeptidase A4U88_RS06485 PF00583 Acetyltransferase (GNAT) family A4U88_RS06490 PF06983 3-demethylubiquinone-9 3-methyltransferase A4U88_RS06495 PF12146 Putative lysophospholipase A4U88_RS06500 PF05661 A4U88_RS06500 A4U88_RS06505 PF13420 Acetyltransferase (GNAT) domain A4U88_RS06510 PF07739 TipAS antibiotic-recognition domain A4U88_RS06510 PF13411 MerR HTH family regulatory protein A4U88_RS06515 PF02452 PemK-like protein A4U88_RS06520 PF03180 NLPA lipoprotein A4U88_RS06525 PF07313 Protein of unknown function (DUF1460) A4U88_RS06530 PF00583 Acetyltransferase (GNAT) family A4U88_RS06535 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS06535 PF14602 Hexapeptide repeat of succinyl-transferase A4U88_RS06540 PF06930 A4U88_RS06540 A4U88_RS06545 PF00892 EamA-like transporter family A4U88_RS06550 PF00005 ABC transporter A4U88_RS06555 PF01497 Periplasmic binding protein A4U88_RS06560 PF01032 FecCD transport family A4U88_RS06565 PF01565 FAD binding domain A4U88_RS06565 PF09330 D-lactate dehydrogenase, membrane binding A4U88_RS06585 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS06590 PF00155 Aminotransferase class I and II A4U88_RS06595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS06595 PF03466 LysR substrate binding domain A4U88_RS06620 PF00561 alpha/beta hydrolase fold A4U88_RS06625 PF02611 CDP-diacylglycerol pyrophosphatase A4U88_RS06630 PF01047 MarR family A4U88_RS06640 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS06640 PF01799 [2Fe-2S] binding domain A4U88_RS06645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase A4U88_RS06655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A4U88_RS06660 PF01844 HNH endonuclease A4U88_RS06665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS06665 PF03466 LysR substrate binding domain A4U88_RS06670 PF07690 Major Facilitator Superfamily A4U88_RS06675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A4U88_RS06675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A4U88_RS06680 PF03992 Antibiotic biosynthesis monooxygenase A4U88_RS06685 PF00892 EamA-like transporter family A4U88_RS06690 PF01810 A4U88_RS06690 A4U88_RS06695 PF02311 AraC-like ligand binding domain A4U88_RS06695 PF12833 Helix-turn-helix domain A4U88_RS06705 PF01163 RIO1 family A4U88_RS06710 PF00128 Alpha amylase, catalytic domain A4U88_RS06720 PF00939 Sodium:sulfate symporter transmembrane region A4U88_RS06725 PF01678 Diaminopimelate epimerase A4U88_RS06730 PF07338 Protein of unknown function (DUF1471) A4U88_RS06735 PF07338 Protein of unknown function (DUF1471) A4U88_RS06740 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS06745 PF03180 NLPA lipoprotein A4U88_RS06750 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS06755 PF00005 ABC transporter A4U88_RS06755 PF09383 NIL domain A4U88_RS06760 PF13673 Acetyltransferase (GNAT) domain A4U88_RS06765 PF09995 A4U88_RS06765 A4U88_RS06770 PF05076 Suppressor of fused protein (SUFU) A4U88_RS06775 PF00857 Isochorismatase family A4U88_RS06780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A4U88_RS06780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A4U88_RS06785 PF00579 tRNA synthetases class I (W and Y) A4U88_RS06790 PF00005 ABC transporter A4U88_RS06795 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein A4U88_RS06800 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS06805 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS06810 PF07308 A4U88_RS06810 A4U88_RS06820 PF13229 Right handed beta helix region A4U88_RS06825 PF01425 Amidase A4U88_RS06835 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS06835 PF07729 FCD domain A4U88_RS06840 PF13433 Periplasmic binding protein domain A4U88_RS06845 PF02653 A4U88_RS06845 A4U88_RS06845 PF13646 HEAT repeats A4U88_RS06850 PF02653 A4U88_RS06850 A4U88_RS06855 PF00005 ABC transporter A4U88_RS06855 PF12399 Branched-chain amino acid ATP-binding cassette transporter A4U88_RS06860 PF00005 ABC transporter A4U88_RS06870 PF03693 Uncharacterised protein family (UPF0156) A4U88_RS06875 PF09933 A4U88_RS06875 A4U88_RS06880 PF00583 Acetyltransferase (GNAT) family A4U88_RS06885 PF05016 Plasmid stabilisation system protein A4U88_RS06890 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system A4U88_RS06895 PF01494 FAD binding domain A4U88_RS06900 PF16157 A4U88_RS06900 A4U88_RS06905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS06905 PF03466 LysR substrate binding domain A4U88_RS06910 PF00581 Rhodanese-like domain A4U88_RS06915 PF00293 NUDIX domain A4U88_RS06925 PF12625 A4U88_RS06925 A4U88_RS06925 PF12833 Helix-turn-helix domain A4U88_RS06930 PF00106 short chain dehydrogenase A4U88_RS06935 PF00155 Aminotransferase class I and II A4U88_RS06935 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS06940 PF06568 A4U88_RS06940 A4U88_RS06945 PF13410 Glutathione S-transferase, C-terminal domain A4U88_RS06945 PF13417 Glutathione S-transferase, N-terminal domain A4U88_RS06950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4U88_RS06950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A4U88_RS06955 PF07969 Amidohydrolase family A4U88_RS06960 PF03992 Antibiotic biosynthesis monooxygenase A4U88_RS06965 PF00857 Isochorismatase family A4U88_RS06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS06970 PF03466 LysR substrate binding domain A4U88_RS06975 PF06519 TolA C-terminal A4U88_RS06980 PF02566 OsmC-like protein A4U88_RS06985 PF00487 A4U88_RS06985 A4U88_RS06990 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A4U88_RS06995 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS07000 PF00005 ABC transporter A4U88_RS07005 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS07010 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein A4U88_RS07015 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS07020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS07020 PF03466 LysR substrate binding domain A4U88_RS07025 PF00892 EamA-like transporter family A4U88_RS07030 PF11086 A4U88_RS07030 A4U88_RS07040 PF07690 Major Facilitator Superfamily A4U88_RS07045 PF01381 Helix-turn-helix A4U88_RS07050 PF13673 Acetyltransferase (GNAT) domain A4U88_RS07060 PF00583 Acetyltransferase (GNAT) family A4U88_RS07060 PF13508 Acetyltransferase (GNAT) domain A4U88_RS07065 PF00267 Gram-negative porin A4U88_RS07075 PF02627 Carboxymuconolactone decarboxylase family A4U88_RS07080 PF14552 Tautomerase enzyme A4U88_RS07085 PF06733 DEAD_2 A4U88_RS07085 PF13307 Helicase C-terminal domain A4U88_RS07090 PF01037 AsnC family A4U88_RS07090 PF13412 Winged helix-turn-helix DNA-binding A4U88_RS07100 PF00158 Sigma-54 interaction domain A4U88_RS07100 PF02954 Bacterial regulatory protein, Fis family A4U88_RS07100 PF06506 Propionate catabolism activator A4U88_RS07105 PF13714 Phosphoenolpyruvate phosphomutase A4U88_RS07115 PF03972 MmgE/PrpD family A4U88_RS07120 PF01810 A4U88_RS07120 A4U88_RS07125 PF13560 Helix-turn-helix domain A4U88_RS07130 PF07690 Major Facilitator Superfamily A4U88_RS07135 PF04299 Putative FMN-binding domain A4U88_RS07140 PF00591 Glycosyl transferase family, a/b domain A4U88_RS07140 PF02885 Glycosyl transferase family, helical bundle domain A4U88_RS07145 PF01432 Peptidase family M3 A4U88_RS07150 PF00484 Carbonic anhydrase A4U88_RS07155 PF07338 Protein of unknown function (DUF1471) A4U88_RS07160 PF01613 Flavin reductase like domain A4U88_RS07165 PF05971 Protein of unknown function (DUF890) A4U88_RS07175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A4U88_RS07175 PF08447 PAS fold A4U88_RS07175 PF08448 PAS fold A4U88_RS07180 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS07185 PF00583 Acetyltransferase (GNAT) family A4U88_RS07190 PF02129 X-Pro dipeptidyl-peptidase (S15 family) A4U88_RS07195 PF00924 Mechanosensitive ion channel A4U88_RS07200 PF00005 ABC transporter A4U88_RS07205 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS07210 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS07215 PF01258 Prokaryotic dksA/traR C4-type zinc finger A4U88_RS07220 PF00210 Ferritin-like domain A4U88_RS07225 PF01202 Shikimate kinase A4U88_RS07230 PF04074 Domain of unknown function (DUF386) A4U88_RS07235 PF00892 EamA-like transporter family A4U88_RS07240 PF13505 Outer membrane protein beta-barrel domain A4U88_RS07245 PF00795 Carbon-nitrogen hydrolase A4U88_RS07250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS07250 PF03466 LysR substrate binding domain A4U88_RS07255 PF13302 Acetyltransferase (GNAT) domain A4U88_RS07260 PF02447 A4U88_RS07260 A4U88_RS07265 PF01261 Xylose isomerase-like TIM barrel A4U88_RS07270 PF00596 Class II Aldolase and Adducin N-terminal domain A4U88_RS07275 PF07005 Protein of unknown function, DUF1537 A4U88_RS07275 PF17042 A4U88_RS07275 A4U88_RS07280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A4U88_RS07280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A4U88_RS07285 PF00455 A4U88_RS07285 A4U88_RS07285 PF08220 DeoR-like helix-turn-helix domain A4U88_RS07295 PF00174 Oxidoreductase molybdopterin binding domain A4U88_RS07300 PF01292 Prokaryotic cytochrome b561 A4U88_RS07310 PF00072 Response regulator receiver domain A4U88_RS07310 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS07315 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS07315 PF00672 HAMP domain A4U88_RS07315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS07320 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS07320 PF00672 HAMP domain A4U88_RS07320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS07325 PF00072 Response regulator receiver domain A4U88_RS07325 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS07330 PF01292 Prokaryotic cytochrome b561 A4U88_RS07335 PF00174 Oxidoreductase molybdopterin binding domain A4U88_RS07345 PF04224 A4U88_RS07345 A4U88_RS07350 PF02028 BCCT family transporter A4U88_RS07355 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS07355 PF13977 Bacterial transcriptional repressor A4U88_RS07360 PF00171 Aldehyde dehydrogenase family A4U88_RS07365 PF00732 GMC oxidoreductase A4U88_RS07365 PF05199 GMC oxidoreductase A4U88_RS07370 PF01645 Conserved region in glutamate synthase A4U88_RS07380 PF00563 EAL domain A4U88_RS07385 PF00419 Fimbrial protein A4U88_RS07390 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS07390 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U88_RS07400 PF00419 Fimbrial protein A4U88_RS07405 PF12833 Helix-turn-helix domain A4U88_RS07410 PF06039 A4U88_RS07410 A4U88_RS07415 PF00245 Alkaline phosphatase A4U88_RS07420 PF00043 Glutathione S-transferase, C-terminal domain A4U88_RS07420 PF02798 Glutathione S-transferase, N-terminal domain A4U88_RS07425 PF01022 Bacterial regulatory protein, arsR family A4U88_RS07430 PF03992 Antibiotic biosynthesis monooxygenase A4U88_RS07440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS07440 PF03466 LysR substrate binding domain A4U88_RS07445 PF00583 Acetyltransferase (GNAT) family A4U88_RS07450 PF09857 A4U88_RS07450 A4U88_RS07455 PF02560 Cyanate lyase C-terminal domain A4U88_RS07460 PF00484 Carbonic anhydrase A4U88_RS07465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS07465 PF03466 LysR substrate binding domain A4U88_RS07470 PF01638 HxlR-like helix-turn-helix A4U88_RS07475 PF01361 Tautomerase enzyme A4U88_RS07480 PF00005 ABC transporter A4U88_RS07480 PF12848 ABC transporter A4U88_RS07485 PF00899 ThiF family A4U88_RS07490 PF00994 Probable molybdopterin binding domain A4U88_RS07490 PF03453 MoeA N-terminal region (domain I and II) A4U88_RS07490 PF03454 MoeA C-terminal region (domain IV) A4U88_RS07495 PF06041 Bacterial protein of unknown function (DUF924) A4U88_RS07500 PF01112 Asparaginase A4U88_RS07505 PF00005 ABC transporter A4U88_RS07505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U88_RS07510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS07515 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS07520 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS07520 PF12911 A4U88_RS07520 A4U88_RS07525 PF07362 Post-segregation antitoxin CcdA A4U88_RS07530 PF01845 CcdB protein A4U88_RS07535 PF00756 Putative esterase A4U88_RS07540 PF00107 Zinc-binding dehydrogenase A4U88_RS07540 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS07545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS07545 PF03466 LysR substrate binding domain A4U88_RS07555 PF01227 GTP cyclohydrolase I A4U88_RS07560 PF04235 A4U88_RS07560 A4U88_RS07565 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS07565 PF13377 Periplasmic binding protein-like domain A4U88_RS07570 PF13407 Periplasmic binding protein domain A4U88_RS07575 PF00005 ABC transporter A4U88_RS07580 PF02653 A4U88_RS07580 A4U88_RS07585 PF02698 DUF218 domain A4U88_RS07590 PF00390 Malic enzyme, N-terminal domain A4U88_RS07590 PF03949 Malic enzyme, NAD binding domain A4U88_RS07595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A4U88_RS07595 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region A4U88_RS07600 PF04172 A4U88_RS07600 A4U88_RS07605 PF03788 A4U88_RS07605 A4U88_RS07610 PF07690 Major Facilitator Superfamily A4U88_RS07615 PF13407 Periplasmic binding protein domain A4U88_RS07620 PF01588 Putative tRNA binding domain A4U88_RS07620 PF09334 tRNA synthetases class I (M) A4U88_RS07625 PF10609 ParA/MinD ATPase like A4U88_RS07630 PF01569 PAP2 superfamily A4U88_RS07635 PF00485 Phosphoribulokinase / Uridine kinase family A4U88_RS07640 PF00692 dUTPase A4U88_RS07645 PF05170 A4U88_RS07645 A4U88_RS07645 PF13502 A4U88_RS07645 A4U88_RS07650 PF03606 A4U88_RS07650 A4U88_RS07655 PF00571 CBS domain A4U88_RS07655 PF03471 Transporter associated domain A4U88_RS07655 PF03741 A4U88_RS07655 A4U88_RS07665 PF00483 Nucleotidyl transferase A4U88_RS07670 PF02563 Polysaccharide biosynthesis/export protein A4U88_RS07670 PF10531 SLBB domain A4U88_RS07675 PF01451 Low molecular weight phosphotyrosine protein phosphatase A4U88_RS07680 PF02706 Chain length determinant protein A4U88_RS07680 PF13614 AAA domain A4U88_RS07680 PF13807 A4U88_RS07680 A4U88_RS07685 PF00534 Glycosyl transferases group 1 A4U88_RS07685 PF13439 Glycosyltransferase Family 4 A4U88_RS07695 PF00534 Glycosyl transferases group 1 A4U88_RS07700 PF00534 Glycosyl transferases group 1 A4U88_RS07700 PF13439 Glycosyltransferase Family 4 A4U88_RS07715 PF00534 Glycosyl transferases group 1 A4U88_RS07720 PF00156 Phosphoribosyl transferase domain A4U88_RS07735 PF13946 A4U88_RS07735 A4U88_RS07745 PF00529 HlyD family secretion protein A4U88_RS07750 PF02321 Outer membrane efflux protein A4U88_RS07755 PF00483 Nucleotidyl transferase A4U88_RS07755 PF01050 Mannose-6-phosphate isomerase A4U88_RS07760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A4U88_RS07760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A4U88_RS07760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A4U88_RS07760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A4U88_RS07765 PF16363 A4U88_RS07765 A4U88_RS07770 PF00483 Nucleotidyl transferase A4U88_RS07770 PF01050 Mannose-6-phosphate isomerase A4U88_RS07775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A4U88_RS07775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A4U88_RS07775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A4U88_RS07775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A4U88_RS07780 PF01061 A4U88_RS07780 A4U88_RS07790 PF13489 Methyltransferase domain A4U88_RS07800 PF00534 Glycosyl transferases group 1 A4U88_RS07800 PF13439 Glycosyltransferase Family 4 A4U88_RS07805 PF00534 Glycosyl transferases group 1 A4U88_RS07805 PF13439 Glycosyltransferase Family 4 A4U88_RS07810 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A4U88_RS07810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A4U88_RS07815 PF01502 Phosphoribosyl-AMP cyclohydrolase A4U88_RS07815 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A4U88_RS07820 PF00977 Histidine biosynthesis protein A4U88_RS07825 PF00977 Histidine biosynthesis protein A4U88_RS07830 PF00117 Glutamine amidotransferase class-I A4U88_RS07835 PF00475 Imidazoleglycerol-phosphate dehydratase A4U88_RS07835 PF08645 Polynucleotide kinase 3 phosphatase A4U88_RS07840 PF00155 Aminotransferase class I and II A4U88_RS07845 PF00815 Histidinol dehydrogenase A4U88_RS07850 PF01634 ATP phosphoribosyltransferase A4U88_RS07850 PF08029 HisG, C-terminal domain A4U88_RS07855 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS07860 PF03466 LysR substrate binding domain A4U88_RS07865 PF00491 Arginase family A4U88_RS07870 PF00474 Sodium:solute symporter family A4U88_RS07875 PF00795 Carbon-nitrogen hydrolase A4U88_RS07880 PF01544 CorA-like Mg2+ transporter protein A4U88_RS07885 PF00583 Acetyltransferase (GNAT) family A4U88_RS07890 PF07995 Glucose / Sorbosone dehydrogenase A4U88_RS07895 PF13410 Glutathione S-transferase, C-terminal domain A4U88_RS07895 PF13417 Glutathione S-transferase, N-terminal domain A4U88_RS07900 PF12710 haloacid dehalogenase-like hydrolase A4U88_RS07905 PF03171 2OG-Fe(II) oxygenase superfamily A4U88_RS07905 PF14226 non-haem dioxygenase in morphine synthesis N-terminal A4U88_RS07910 PF01053 Cys/Met metabolism PLP-dependent enzyme A4U88_RS07915 PF00291 Pyridoxal-phosphate dependent enzyme A4U88_RS07915 PF00571 CBS domain A4U88_RS07920 PF00768 D-alanyl-D-alanine carboxypeptidase A4U88_RS07920 PF07943 Penicillin-binding protein 5, C-terminal domain A4U88_RS07925 PF00419 Fimbrial protein A4U88_RS07930 PF00419 Fimbrial protein A4U88_RS07930 PF09160 FimH, mannose binding A4U88_RS07940 PF00419 Fimbrial protein A4U88_RS07950 PF00577 Outer membrane usher protein A4U88_RS07950 PF13953 PapC C-terminal domain A4U88_RS07950 PF13954 PapC N-terminal domain A4U88_RS07955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS07955 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U88_RS07960 PF00419 Fimbrial protein A4U88_RS07965 PF00419 Fimbrial protein A4U88_RS07975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U88_RS07975 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A4U88_RS07980 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS07985 PF03313 A4U88_RS07985 A4U88_RS07985 PF03315 Serine dehydratase beta chain A4U88_RS07990 PF03222 Tryptophan/tyrosine permease family A4U88_RS07995 PF00455 A4U88_RS07995 A4U88_RS07995 PF08220 DeoR-like helix-turn-helix domain A4U88_RS08000 PF01791 DeoC/LacD family aldolase A4U88_RS08010 PF01569 PAP2 superfamily A4U88_RS08015 PF01569 PAP2 superfamily A4U88_RS08020 PF03974 Ecotin A4U88_RS08030 PF02080 TrkA-C domain A4U88_RS08030 PF06826 A4U88_RS08030 A4U88_RS08035 PF11045 A4U88_RS08035 A4U88_RS08040 PF00462 Glutaredoxin A4U88_RS08045 PF07214 A4U88_RS08045 A4U88_RS08050 PF08443 RimK-like ATP-grasp domain A4U88_RS08055 PF10722 Putative bacterial sensory transduction regulator A4U88_RS08060 PF13416 Bacterial extracellular solute-binding protein A4U88_RS08065 PF00005 ABC transporter A4U88_RS08065 PF08402 TOBE domain A4U88_RS08070 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS08075 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS08080 PF10767 A4U88_RS08080 A4U88_RS08085 PF05958 tRNA (Uracil-5-)-methyltransferase A4U88_RS08095 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system A4U88_RS08100 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS08105 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS08110 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS08115 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS08120 PF00005 ABC transporter A4U88_RS08125 PF12883 Protein of unknown function (DUF3828) A4U88_RS08130 PF01906 Putative heavy-metal-binding A4U88_RS08135 PF01510 N-acetylmuramoyl-L-alanine amidase A4U88_RS08140 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS08145 PF11066 A4U88_RS08145 A4U88_RS08145 PF13460 NADH(P)-binding A4U88_RS08150 PF06961 A4U88_RS08150 A4U88_RS08155 PF01212 Beta-eliminating lyase A4U88_RS08160 PF00205 Thiamine pyrophosphate enzyme, central domain A4U88_RS08160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U88_RS08160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U88_RS08165 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS08165 PF00175 Oxidoreductase NAD-binding domain A4U88_RS08165 PF00970 Oxidoreductase FAD-binding domain A4U88_RS08170 PF03063 Prismane/CO dehydrogenase family A4U88_RS08175 PF03956 A4U88_RS08175 A4U88_RS08180 PF11398 Protein of unknown function (DUF2813) A4U88_RS08185 PF04393 A4U88_RS08185 A4U88_RS08200 PF00313 'Cold-shock' DNA-binding domain A4U88_RS08205 PF02617 ATP-dependent Clp protease adaptor protein ClpS A4U88_RS08210 PF00004 ATPase family associated with various cellular activities (AAA) A4U88_RS08210 PF02861 Clp amino terminal domain A4U88_RS08210 PF07724 AAA domain (Cdc48 subfamily) A4U88_RS08210 PF10431 C-terminal, D2-small domain, of ClpB protein A4U88_RS08215 PF01176 Translation initiation factor 1A / IF-1 A4U88_RS08225 PF00005 ABC transporter A4U88_RS08225 PF00664 ABC transporter transmembrane region A4U88_RS08230 PF00005 ABC transporter A4U88_RS08230 PF00664 ABC transporter transmembrane region A4U88_RS08235 PF00043 Glutathione S-transferase, C-terminal domain A4U88_RS08235 PF02798 Glutathione S-transferase, N-terminal domain A4U88_RS08245 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U88_RS08250 PF01037 AsnC family A4U88_RS08250 PF13412 Winged helix-turn-helix DNA-binding A4U88_RS08255 PF01580 FtsK/SpoIIIE family A4U88_RS08255 PF09397 Ftsk gamma domain A4U88_RS08255 PF13491 A4U88_RS08255 A4U88_RS08265 PF00004 ATPase family associated with various cellular activities (AAA) A4U88_RS08265 PF12002 MgsA AAA+ ATPase C terminal A4U88_RS08265 PF16193 A4U88_RS08265 A4U88_RS08270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A4U88_RS08270 PF02403 Seryl-tRNA synthetase N-terminal domain A4U88_RS08275 PF08818 Domain of unknown function (DU1801) A4U88_RS08280 PF07690 Major Facilitator Superfamily A4U88_RS08285 PF04055 Radical SAM superfamily A4U88_RS08285 PF13353 4Fe-4S single cluster domain A4U88_RS08290 PF01228 Glycine radical A4U88_RS08290 PF02901 Pyruvate formate lyase A4U88_RS08295 PF01226 Formate/nitrite transporter A4U88_RS08300 PF02624 YcaO-like family A4U88_RS08305 PF00710 Asparaginase A4U88_RS08310 PF00266 Aminotransferase class-V A4U88_RS08315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A4U88_RS08320 PF02224 Cytidylate kinase A4U88_RS08325 PF00575 S1 RNA binding domain A4U88_RS08335 PF00753 Metallo-beta-lactamase superfamily A4U88_RS08335 PF03772 A4U88_RS08335 A4U88_RS08335 PF13567 A4U88_RS08335 A4U88_RS08340 PF00005 ABC transporter A4U88_RS08340 PF00664 ABC transporter transmembrane region A4U88_RS08345 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A4U88_RS08350 PF07063 Domain of unknown function (DUF1338) A4U88_RS08355 PF00313 'Cold-shock' DNA-binding domain A4U88_RS08360 PF00313 'Cold-shock' DNA-binding domain A4U88_RS08365 PF06224 A4U88_RS08365 A4U88_RS08370 PF03966 Trm112p-like protein A4U88_RS08375 PF02348 Cytidylyltransferase A4U88_RS08380 PF01636 Phosphotransferase enzyme family A4U88_RS08385 PF02698 DUF218 domain A4U88_RS08390 PF13847 Methyltransferase domain A4U88_RS08395 PF03882 KicB killing factor A4U88_RS08395 PF17192 A4U88_RS08395 A4U88_RS08395 PF17193 A4U88_RS08395 A4U88_RS08400 PF04288 MukE-like family A4U88_RS08405 PF04310 MukB N-terminal A4U88_RS08405 PF13558 Putative exonuclease SbcCD, C subunit A4U88_RS08405 PF16330 A4U88_RS08405 A4U88_RS08410 PF01471 Putative peptidoglycan binding domain A4U88_RS08410 PF03734 L,D-transpeptidase catalytic domain A4U88_RS08415 PF05951 A4U88_RS08415 A4U88_RS08420 PF00753 Metallo-beta-lactamase superfamily A4U88_RS08425 PF00155 Aminotransferase class I and II A4U88_RS08430 PF00267 Gram-negative porin A4U88_RS08435 PF00152 tRNA synthetases class II (D, K and N) A4U88_RS08435 PF01336 OB-fold nucleic acid binding domain A4U88_RS08440 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family A4U88_RS08450 PF01433 Peptidase family M1 A4U88_RS08450 PF11940 Domain of unknown function (DUF3458) A4U88_RS08455 PF00005 ABC transporter A4U88_RS08465 PF00296 Luciferase-like monooxygenase A4U88_RS08470 PF09084 NMT1/THI5 like A4U88_RS08475 PF03358 NADPH-dependent FMN reductase A4U88_RS08480 PF01180 Dihydroorotate dehydrogenase A4U88_RS08485 PF07126 A4U88_RS08485 A4U88_RS08490 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS08490 PF03473 MOSC domain A4U88_RS08490 PF03476 MOSC N-terminal beta barrel domain A4U88_RS08495 PF01170 Putative RNA methylase family UPF0020 A4U88_RS08495 PF02926 THUMP domain A4U88_RS08495 PF10672 S-adenosylmethionine-dependent methyltransferase A4U88_RS08500 PF00005 ABC transporter A4U88_RS08500 PF12848 ABC transporter A4U88_RS08500 PF16326 A4U88_RS08500 A4U88_RS08510 PF02470 A4U88_RS08510 A4U88_RS08515 PF03886 Protein of unknown function (DUF330) A4U88_RS08525 PF04957 Ribosome modulation factor A4U88_RS08530 PF00109 Beta-ketoacyl synthase, N-terminal domain A4U88_RS08530 PF02801 Beta-ketoacyl synthase, C-terminal domain A4U88_RS08535 PF01638 HxlR-like helix-turn-helix A4U88_RS08540 PF07977 FabA-like domain A4U88_RS08545 PF05362 Lon protease (S16) C-terminal proteolytic domain A4U88_RS08545 PF13654 AAA domain A4U88_RS08550 PF06303 Organiser of macrodomain of Terminus of chromosome A4U88_RS08555 PF00691 OmpA family A4U88_RS08555 PF01389 OmpA-like transmembrane domain A4U88_RS08560 PF03846 Cell division inhibitor SulA A4U88_RS08565 PF04993 TfoX N-terminal domain A4U88_RS08565 PF04994 TfoX C-terminal domain A4U88_RS08575 PF03733 A4U88_RS08575 A4U88_RS08580 PF00580 UvrD/REP helicase N-terminal domain A4U88_RS08580 PF12462 A4U88_RS08580 A4U88_RS08580 PF13361 UvrD-like helicase C-terminal domain A4U88_RS08585 PF02142 MGS-like domain A4U88_RS08590 PF09829 A4U88_RS08590 A4U88_RS08595 PF13380 CoA binding domain A4U88_RS08600 PF08755 Hemimethylated DNA-binding protein YccV like A4U88_RS08605 PF10672 S-adenosylmethionine-dependent methyltransferase A4U88_RS08610 PF00708 Acylphosphatase A4U88_RS08615 PF04358 DsrC like protein A4U88_RS08620 PF01027 Inhibitor of apoptosis-promoting Bax1 A4U88_RS08640 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS08655 PF00419 Fimbrial protein A4U88_RS08660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS08660 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U88_RS08670 PF00419 Fimbrial protein A4U88_RS08675 PF07338 Protein of unknown function (DUF1471) A4U88_RS08680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS08680 PF03466 LysR substrate binding domain A4U88_RS08685 PF00376 MerR family regulatory protein A4U88_RS08685 PF09278 MerR, DNA binding A4U88_RS08690 PF07681 A4U88_RS08690 A4U88_RS08695 PF16576 A4U88_RS08695 A4U88_RS08700 PF00873 AcrB/AcrD/AcrF family A4U88_RS08705 PF01223 DNA/RNA non-specific endonuclease A4U88_RS08710 PF02386 Cation transport protein A4U88_RS08720 PF03358 NADPH-dependent FMN reductase A4U88_RS08725 PF01810 A4U88_RS08725 A4U88_RS08730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS08730 PF03466 LysR substrate binding domain A4U88_RS08735 PF01381 Helix-turn-helix A4U88_RS08735 PF13239 A4U88_RS08735 A4U88_RS08745 PF00892 EamA-like transporter family A4U88_RS08750 PF00324 Amino acid permease A4U88_RS08760 PF09335 A4U88_RS08760 A4U88_RS08770 PF03992 Antibiotic biosynthesis monooxygenase A4U88_RS08780 PF13302 Acetyltransferase (GNAT) domain A4U88_RS08785 PF00378 Enoyl-CoA hydratase/isomerase family A4U88_RS08790 PF07690 Major Facilitator Superfamily A4U88_RS08800 PF00108 Thiolase, N-terminal domain A4U88_RS08800 PF02803 Thiolase, C-terminal domain A4U88_RS08805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U88_RS08805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U88_RS08810 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS08810 PF03472 Autoinducer binding domain A4U88_RS08815 PF00582 Universal stress protein family A4U88_RS08830 PF13520 Amino acid permease A4U88_RS08835 PF00171 Aldehyde dehydrogenase family A4U88_RS08840 PF00701 Dihydrodipicolinate synthetase family A4U88_RS08845 PF08448 PAS fold A4U88_RS08845 PF12833 Helix-turn-helix domain A4U88_RS08855 PF01266 FAD dependent oxidoreductase A4U88_RS08860 PF13510 2Fe-2S iron-sulfur cluster binding domain A4U88_RS08865 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U88_RS08880 PF06942 A4U88_RS08880 A4U88_RS08885 PF10769 A4U88_RS08885 A4U88_RS08890 PF00072 Response regulator receiver domain A4U88_RS08890 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS08895 PF01541 GIY-YIG catalytic domain A4U88_RS08895 PF02151 UvrB/uvrC motif A4U88_RS08895 PF08459 UvrC Helix-hairpin-helix N-terminal A4U88_RS08895 PF14520 Helix-hairpin-helix domain A4U88_RS08900 PF01066 CDP-alcohol phosphatidyltransferase A4U88_RS08910 PF13569 A4U88_RS08910 A4U88_RS08915 PF00857 Isochorismatase family A4U88_RS08920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS08925 PF03466 LysR substrate binding domain A4U88_RS08940 PF03605 A4U88_RS08940 A4U88_RS08945 PF03061 Thioesterase superfamily A4U88_RS08965 PF00083 Sugar (and other) transporter A4U88_RS08965 PF08946 Osmosensory transporter coiled coil A4U88_RS08970 PF02321 Outer membrane efflux protein A4U88_RS08975 PF00005 ABC transporter A4U88_RS08975 PF02687 A4U88_RS08975 A4U88_RS08975 PF12704 MacB-like periplasmic core domain A4U88_RS08980 PF16576 A4U88_RS08980 A4U88_RS08995 PF10796 A4U88_RS08995 A4U88_RS09000 PF10777 A4U88_RS09000 A4U88_RS09015 PF01757 A4U88_RS09015 A4U88_RS09020 PF04349 Periplasmic glucan biosynthesis protein, MdoG A4U88_RS09025 PF00535 Glycosyl transferase family 2 A4U88_RS09030 PF07119 A4U88_RS09030 A4U88_RS09040 PF13984 A4U88_RS09040 A4U88_RS09045 PF00682 HMGL-like A4U88_RS09045 PF08502 LeuA allosteric (dimerisation) domain A4U88_RS09050 PF07883 Cupin domain A4U88_RS09050 PF12833 Helix-turn-helix domain A4U88_RS09055 PF01022 Bacterial regulatory protein, arsR family A4U88_RS09070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS09075 PF00854 POT family A4U88_RS09080 PF07690 Major Facilitator Superfamily A4U88_RS09085 PF03795 YCII-related domain A4U88_RS09090 PF03279 A4U88_RS09090 A4U88_RS09100 PF00581 Rhodanese-like domain A4U88_RS09100 PF12368 A4U88_RS09100 A4U88_RS09105 PF04264 YceI-like domain A4U88_RS09110 PF01292 Prokaryotic cytochrome b561 A4U88_RS09115 PF01594 A4U88_RS09115 A4U88_RS09120 PF13602 Zinc-binding dehydrogenase A4U88_RS09125 PF10968 A4U88_RS09125 A4U88_RS09130 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS09135 PF01266 FAD dependent oxidoreductase A4U88_RS09140 PF13991 A4U88_RS09140 A4U88_RS09150 PF06183 DinI-like family A4U88_RS09155 PF01979 Amidohydrolase family A4U88_RS09160 PF03992 Antibiotic biosynthesis monooxygenase A4U88_RS09165 PF00575 S1 RNA binding domain A4U88_RS09165 PF10150 Ribonuclease E/G family A4U88_RS09165 PF12111 Polyribonucleotide phosphorylase C terminal A4U88_RS09175 PF02545 Maf-like protein A4U88_RS09180 PF02620 A4U88_RS09180 A4U88_RS09185 PF01783 Ribosomal L32p protein family A4U88_RS09190 PF02504 Fatty acid synthesis protein A4U88_RS09195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A4U88_RS09195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A4U88_RS09200 PF00698 Acyl transferase domain A4U88_RS09205 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS09210 PF00550 Phosphopantetheine attachment site A4U88_RS09215 PF00109 Beta-ketoacyl synthase, N-terminal domain A4U88_RS09215 PF02801 Beta-ketoacyl synthase, C-terminal domain A4U88_RS09220 PF01063 Aminotransferase class IV A4U88_RS09225 PF02618 YceG-like family A4U88_RS09230 PF02223 Thymidylate kinase A4U88_RS09235 PF09115 DNA polymerase III, delta subunit, C terminal A4U88_RS09235 PF13177 DNA polymerase III, delta subunit A4U88_RS09240 PF01026 TatD related DNase A4U88_RS09250 PF13788 A4U88_RS09250 A4U88_RS09255 PF01325 Iron dependent repressor, N-terminal DNA binding domain A4U88_RS09255 PF02742 Iron dependent repressor, metal binding and dimerisation domain A4U88_RS09260 PF01566 A4U88_RS09260 A4U88_RS09265 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS09270 PF01638 HxlR-like helix-turn-helix A4U88_RS09275 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS09280 PF01230 HIT domain A4U88_RS09285 PF07233 Protein of unknown function (DUF1425) A4U88_RS09290 PF13036 Protein of unknown function (DUF3897) A4U88_RS09295 PF01636 Phosphotransferase enzyme family A4U88_RS09300 PF00933 Glycosyl hydrolase family 3 N terminal domain A4U88_RS09305 PF05728 Uncharacterised protein family (UPF0227) A4U88_RS09315 PF05433 A4U88_RS09315 A4U88_RS09320 PF02082 Transcriptional regulator A4U88_RS09325 PF00873 AcrB/AcrD/AcrF family A4U88_RS09330 PF16576 A4U88_RS09330 A4U88_RS09335 PF12833 Helix-turn-helix domain A4U88_RS09370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4U88_RS09375 PF02811 PHP domain A4U88_RS09380 PF02613 Nitrate reductase delta subunit A4U88_RS09385 PF04391 A4U88_RS09385 A4U88_RS09390 PF00326 Prolyl oligopeptidase family A4U88_RS09390 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A4U88_RS09395 PF00929 Exonuclease A4U88_RS09400 PF00795 Carbon-nitrogen hydrolase A4U88_RS09405 PF01258 Prokaryotic dksA/traR C4-type zinc finger A4U88_RS09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS09410 PF03466 LysR substrate binding domain A4U88_RS09415 PF01042 Endoribonuclease L-PSP A4U88_RS09420 PF00561 alpha/beta hydrolase fold A4U88_RS09425 PF06440 DNA polymerase III, theta subunit A4U88_RS09430 PF00210 Ferritin-like domain A4U88_RS09435 PF04234 CopC domain A4U88_RS09440 PF05425 A4U88_RS09440 A4U88_RS09445 PF10709 A4U88_RS09445 A4U88_RS09470 PF14302 A4U88_RS09470 A4U88_RS09480 PF07055 Enoyl reductase FAD binding domain A4U88_RS09480 PF12241 Trans-2-enoyl-CoA reductase catalytic region A4U88_RS09480 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase A4U88_RS09500 PF00072 Response regulator receiver domain A4U88_RS09505 PF00989 PAS fold A4U88_RS09505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS09505 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A4U88_RS09505 PF17203 A4U88_RS09505 A4U88_RS09510 PF01791 DeoC/LacD family aldolase A4U88_RS09515 PF13407 Periplasmic binding protein domain A4U88_RS09520 PF00005 ABC transporter A4U88_RS09525 PF02653 A4U88_RS09525 A4U88_RS09530 PF13407 Periplasmic binding protein domain A4U88_RS09540 PF03180 NLPA lipoprotein A4U88_RS09550 PF00582 Universal stress protein family A4U88_RS09555 PF12840 Helix-turn-helix domain A4U88_RS09560 PF08327 Activator of Hsp90 ATPase homolog 1-like protein A4U88_RS09565 PF00574 Clp protease A4U88_RS09580 PF00857 Isochorismatase family A4U88_RS09585 PF00591 Glycosyl transferase family, a/b domain A4U88_RS09585 PF02885 Glycosyl transferase family, helical bundle domain A4U88_RS09590 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A4U88_RS09595 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A4U88_RS09600 PF00156 Phosphoribosyl transferase domain A4U88_RS09605 PF07690 Major Facilitator Superfamily A4U88_RS09610 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A4U88_RS09625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS09625 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U88_RS09630 PF00419 Fimbrial protein A4U88_RS09635 PF00577 Outer membrane usher protein A4U88_RS09635 PF13953 PapC C-terminal domain A4U88_RS09635 PF13954 PapC N-terminal domain A4U88_RS09640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS09640 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U88_RS09645 PF00419 Fimbrial protein A4U88_RS09650 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS09655 PF01638 HxlR-like helix-turn-helix A4U88_RS09660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS09660 PF03466 LysR substrate binding domain A4U88_RS09665 PF04909 Amidohydrolase A4U88_RS09670 PF01926 50S ribosome-binding GTPase A4U88_RS09670 PF06071 Protein of unknown function (DUF933) A4U88_RS09675 PF00916 A4U88_RS09675 A4U88_RS09675 PF01740 STAS domain A4U88_RS09680 PF01195 Peptidyl-tRNA hydrolase A4U88_RS09685 PF10762 A4U88_RS09685 A4U88_RS09690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A4U88_RS09690 PF14572 Phosphoribosyl synthetase-associated domain A4U88_RS09695 PF00288 GHMP kinases N terminal domain A4U88_RS09695 PF08544 GHMP kinases C terminal A4U88_RS09700 PF03550 Outer membrane lipoprotein LolB A4U88_RS09705 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A4U88_RS09705 PF01488 Shikimate / quinate 5-dehydrogenase A4U88_RS09705 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A4U88_RS09710 PF00472 RF-1 domain A4U88_RS09710 PF03462 PCRF domain A4U88_RS09715 PF13847 Methyltransferase domain A4U88_RS09720 PF04247 A4U88_RS09720 A4U88_RS09725 PF13369 A4U88_RS09725 A4U88_RS09725 PF13371 Tetratricopeptide repeat A4U88_RS09730 PF00793 DAHP synthetase I family A4U88_RS09735 PF00916 A4U88_RS09735 A4U88_RS09735 PF01740 STAS domain A4U88_RS09740 PF03928 Domain of unknown function (DUF336) A4U88_RS09745 PF00990 GGDEF domain A4U88_RS09750 PF00270 DEAD/DEAH box helicase A4U88_RS09750 PF00271 Helicase conserved C-terminal domain A4U88_RS09750 PF02559 CarD-like/TRCF domain A4U88_RS09750 PF03461 TRCF domain A4U88_RS09755 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS09760 PF02687 A4U88_RS09760 A4U88_RS09760 PF12704 MacB-like periplasmic core domain A4U88_RS09765 PF00005 ABC transporter A4U88_RS09770 PF02687 A4U88_RS09770 A4U88_RS09770 PF12704 MacB-like periplasmic core domain A4U88_RS09775 PF00480 ROK family A4U88_RS09780 PF02146 Sir2 family A4U88_RS09785 PF13416 Bacterial extracellular solute-binding protein A4U88_RS09790 PF01380 SIS domain A4U88_RS09790 PF01418 Helix-turn-helix domain, rpiR family A4U88_RS09795 PF02056 Family 4 glycosyl hydrolase A4U88_RS09795 PF11975 Family 4 glycosyl hydrolase C-terminal domain A4U88_RS09800 PF00367 phosphotransferase system, EIIB A4U88_RS09800 PF02378 Phosphotransferase system, EIIC A4U88_RS09805 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS09810 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS09815 PF00005 ABC transporter A4U88_RS09815 PF08402 TOBE domain A4U88_RS09825 PF07338 Protein of unknown function (DUF1471) A4U88_RS09830 PF12833 Helix-turn-helix domain A4U88_RS09840 PF04632 A4U88_RS09840 A4U88_RS09845 PF00529 HlyD family secretion protein A4U88_RS09845 PF16576 A4U88_RS09845 A4U88_RS09850 PF08007 Cupin superfamily protein A4U88_RS09855 PF00672 HAMP domain A4U88_RS09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS09855 PF08918 PhoQ Sensor A4U88_RS09860 PF00072 Response regulator receiver domain A4U88_RS09860 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS09865 PF03747 ADP-ribosylglycohydrolase A4U88_RS09870 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS09870 PF07702 UTRA domain A4U88_RS09880 PF00583 Acetyltransferase (GNAT) family A4U88_RS09885 PF13302 Acetyltransferase (GNAT) domain A4U88_RS09890 PF00206 Lyase A4U88_RS09890 PF08328 Adenylosuccinate lyase C-terminal A4U88_RS09895 PF04356 Protein of unknown function (DUF489) A4U88_RS09900 PF02705 A4U88_RS09900 A4U88_RS09905 PF03054 tRNA methyl transferase A4U88_RS09910 PF00293 NUDIX domain A4U88_RS09915 PF07007 Protein of unknown function (DUF1311) A4U88_RS09920 PF00849 RNA pseudouridylate synthase A4U88_RS09925 PF00180 Isocitrate/isopropylmalate dehydrogenase A4U88_RS09940 PF00582 Universal stress protein family A4U88_RS09945 PF06519 TolA C-terminal A4U88_RS09950 PF13391 A4U88_RS09950 A4U88_RS09960 PF13673 Acetyltransferase (GNAT) domain A4U88_RS09970 PF01594 A4U88_RS09970 A4U88_RS09975 PF01361 Tautomerase enzyme A4U88_RS09980 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS09985 PF03466 LysR substrate binding domain A4U88_RS09990 PF07690 Major Facilitator Superfamily A4U88_RS10000 PF09391 Protein of unknown function (DUF2000) A4U88_RS10005 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS10005 PF13407 Periplasmic binding protein domain A4U88_RS10010 PF01261 Xylose isomerase-like TIM barrel A4U88_RS10015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4U88_RS10015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A4U88_RS10020 PF04828 Glutathione-dependent formaldehyde-activating enzyme A4U88_RS10030 PF08450 SMP-30/Gluconolaconase/LRE-like region A4U88_RS10035 PF00805 Pentapeptide repeats (8 copies) A4U88_RS10035 PF13599 Pentapeptide repeats (9 copies) A4U88_RS10040 PF01810 A4U88_RS10040 A4U88_RS10045 PF00582 Universal stress protein family A4U88_RS10050 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS10055 PF01266 FAD dependent oxidoreductase A4U88_RS10060 PF00171 Aldehyde dehydrogenase family A4U88_RS10065 PF01381 Helix-turn-helix A4U88_RS10065 PF07883 Cupin domain A4U88_RS10070 PF07722 Peptidase C26 A4U88_RS10090 PF00892 EamA-like transporter family A4U88_RS10100 PF03502 Nucleoside-specific channel-forming protein, Tsx A4U88_RS10115 PF01817 Chorismate mutase type II A4U88_RS10120 PF00144 Beta-lactamase A4U88_RS10125 PF05013 N-formylglutamate amidohydrolase A4U88_RS10135 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS10135 PF07702 UTRA domain A4U88_RS10140 PF01979 Amidohydrolase family A4U88_RS10150 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS10150 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A4U88_RS10160 PF01306 LacY proton/sugar symporter A4U88_RS10165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS10165 PF03466 LysR substrate binding domain A4U88_RS10170 PF07690 Major Facilitator Superfamily A4U88_RS10175 PF00083 Sugar (and other) transporter A4U88_RS10175 PF07690 Major Facilitator Superfamily A4U88_RS10185 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS10190 PF03466 LysR substrate binding domain A4U88_RS10195 PF00107 Zinc-binding dehydrogenase A4U88_RS10195 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS10200 PF01293 Phosphoenolpyruvate carboxykinase A4U88_RS10205 PF03390 A4U88_RS10205 A4U88_RS10225 PF04266 ASCH domain A4U88_RS10230 PF12385 A4U88_RS10230 A4U88_RS10235 PF07351 A4U88_RS10235 A4U88_RS10240 PF05229 A4U88_RS10240 A4U88_RS10250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS10255 PF05229 A4U88_RS10255 A4U88_RS10260 PF05229 A4U88_RS10260 A4U88_RS10270 PF01189 NOL1/NOP2/sun family A4U88_RS10270 PF13636 pre-rRNA processing and ribosome biogenesis A4U88_RS10270 PF17125 A4U88_RS10270 A4U88_RS10275 PF02470 A4U88_RS10275 A4U88_RS10280 PF04403 A4U88_RS10280 A4U88_RS10285 PF13185 GAF domain A4U88_RS10290 PF04352 ProQ/FINO family A4U88_RS10295 PF00595 PDZ domain (Also known as DHR or GLGF) A4U88_RS10295 PF03572 Peptidase family S41 A4U88_RS10295 PF11818 A4U88_RS10295 A4U88_RS10300 PF00892 EamA-like transporter family A4U88_RS10305 PF10100 A4U88_RS10305 A4U88_RS10310 PF03059 Nicotianamine synthase protein A4U88_RS10315 PF00005 ABC transporter A4U88_RS10320 PF01032 FecCD transport family A4U88_RS10330 PF01435 Peptidase family M48 A4U88_RS10340 PF07690 Major Facilitator Superfamily A4U88_RS10345 PF01614 Bacterial transcriptional regulator A4U88_RS10345 PF09339 IclR helix-turn-helix domain A4U88_RS10350 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS10355 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS10370 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS10370 PF07702 UTRA domain A4U88_RS10375 PF00266 Aminotransferase class-V A4U88_RS10380 PF00702 haloacid dehalogenase-like hydrolase A4U88_RS10385 PF00375 Sodium:dicarboxylate symporter family A4U88_RS10390 PF04307 A4U88_RS10390 A4U88_RS10395 PF13419 Haloacid dehalogenase-like hydrolase A4U88_RS10405 PF14002 A4U88_RS10405 A4U88_RS10410 PF03881 Fructosamine kinase A4U88_RS10415 PF00950 A4U88_RS10415 A4U88_RS10420 PF00950 A4U88_RS10420 A4U88_RS10425 PF00005 ABC transporter A4U88_RS10430 PF01297 Periplasmic solute binding protein family A4U88_RS10435 PF11080 Protein of unknown function (DUF2622) A4U88_RS10440 PF01464 Transglycosylase SLT domain A4U88_RS10445 PF13618 A4U88_RS10445 A4U88_RS10450 PF00732 GMC oxidoreductase A4U88_RS10450 PF05199 GMC oxidoreductase A4U88_RS10455 PF00034 Cytochrome c A4U88_RS10455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A4U88_RS10465 PF01497 Periplasmic binding protein A4U88_RS10470 PF01914 A4U88_RS10470 A4U88_RS10485 PF00707 Translation initiation factor IF-3, C-terminal domain A4U88_RS10485 PF05198 Translation initiation factor IF-3, N-terminal domain A4U88_RS10490 PF01632 Ribosomal protein L35 A4U88_RS10495 PF00453 Ribosomal protein L20 A4U88_RS10500 PF01409 tRNA synthetases class II core domain (F) A4U88_RS10500 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A4U88_RS10505 PF01588 Putative tRNA binding domain A4U88_RS10505 PF03147 Ferredoxin-fold anticodon binding domain A4U88_RS10505 PF03483 B3/4 domain A4U88_RS10505 PF03484 tRNA synthetase B5 domain A4U88_RS10510 PF00216 Bacterial DNA-binding protein A4U88_RS10515 PF10697 A4U88_RS10515 A4U88_RS10520 PF01032 FecCD transport family A4U88_RS10525 PF00255 Glutathione peroxidase A4U88_RS10530 PF00005 ABC transporter A4U88_RS10535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A4U88_RS10540 PF00535 Glycosyl transferase family 2 A4U88_RS10545 PF00551 Formyl transferase A4U88_RS10545 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS10545 PF02911 Formyl transferase, C-terminal domain A4U88_RS10550 PF01522 Polysaccharide deacetylase A4U88_RS10560 PF00892 EamA-like transporter family A4U88_RS10570 PF00877 NlpC/P60 family A4U88_RS10575 PF03099 Biotin/lipoate A/B protein ligase family A4U88_RS10575 PF10437 Bacterial lipoate protein ligase C-terminus A4U88_RS10585 PF02696 A4U88_RS10585 A4U88_RS10590 PF00005 ABC transporter A4U88_RS10595 PF01032 FecCD transport family A4U88_RS10600 PF01497 Periplasmic binding protein A4U88_RS10605 PF05171 Haemin-degrading HemS A4U88_RS10610 PF00593 TonB dependent receptor A4U88_RS10610 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS10615 PF10636 Hemin uptake protein hemP A4U88_RS10620 PF00255 Glutathione peroxidase A4U88_RS10625 PF00793 DAHP synthetase I family A4U88_RS10630 PF03618 A4U88_RS10630 A4U88_RS10640 PF00391 PEP-utilising enzyme, mobile domain A4U88_RS10640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A4U88_RS10640 PF02896 PEP-utilising enzyme, TIM barrel domain A4U88_RS10650 PF01594 A4U88_RS10650 A4U88_RS10655 PF01565 FAD binding domain A4U88_RS10655 PF02913 FAD linked oxidases, C-terminal domain A4U88_RS10655 PF13183 4Fe-4S dicluster domain A4U88_RS10660 PF03061 Thioesterase superfamily A4U88_RS10670 PF01521 Iron-sulphur cluster biosynthesis A4U88_RS10675 PF01458 Uncharacterized protein family (UPF0051) A4U88_RS10680 PF00005 ABC transporter A4U88_RS10685 PF01458 Uncharacterized protein family (UPF0051) A4U88_RS10695 PF02657 Fe-S metabolism associated domain A4U88_RS10700 PF03734 L,D-transpeptidase catalytic domain A4U88_RS10710 PF04728 Lipoprotein leucine-zipper A4U88_RS10715 PF00224 Pyruvate kinase, barrel domain A4U88_RS10715 PF02887 Pyruvate kinase, alpha/beta domain A4U88_RS10740 PF01554 MatE A4U88_RS10745 PF00677 Lumazine binding domain A4U88_RS10750 PF11720 Peptidase inhibitor I78 family A4U88_RS10755 PF02353 Mycolic acid cyclopropane synthetase A4U88_RS10760 PF07690 Major Facilitator Superfamily A4U88_RS10770 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS10770 PF13377 Periplasmic binding protein-like domain A4U88_RS10775 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A4U88_RS10775 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A4U88_RS10785 PF00462 Glutaredoxin A4U88_RS10790 PF00929 Exonuclease A4U88_RS10795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS10800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4U88_RS10805 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS10805 PF16925 A4U88_RS10805 A4U88_RS10810 PF00884 Sulfatase A4U88_RS10810 PF08019 A4U88_RS10810 A4U88_RS10815 PF13460 NADH(P)-binding A4U88_RS10820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS10820 PF03466 LysR substrate binding domain A4U88_RS10825 PF06945 A4U88_RS10825 A4U88_RS10830 PF00248 Aldo/keto reductase family A4U88_RS10840 PF00080 Copper/zinc superoxide dismutase (SODC) A4U88_RS10845 PF04632 A4U88_RS10845 A4U88_RS10850 PF16576 A4U88_RS10850 A4U88_RS10855 PF07869 A4U88_RS10855 A4U88_RS10860 PF01047 MarR family A4U88_RS10865 PF05433 A4U88_RS10865 A4U88_RS10870 PF03702 Uncharacterised protein family (UPF0075) A4U88_RS10875 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme A4U88_RS10880 PF01243 Pyridoxamine 5'-phosphate oxidase A4U88_RS10880 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A4U88_RS10885 PF00579 tRNA synthetases class I (W and Y) A4U88_RS10885 PF01479 S4 domain A4U88_RS10895 PF08543 Phosphomethylpyrimidine kinase A4U88_RS10900 PF00043 Glutathione S-transferase, C-terminal domain A4U88_RS10900 PF02798 Glutathione S-transferase, N-terminal domain A4U88_RS10905 PF00701 Dihydrodipicolinate synthetase family A4U88_RS10910 PF11656 A4U88_RS10910 A4U88_RS10915 PF01966 HD domain A4U88_RS10920 PF12680 SnoaL-like domain A4U88_RS10930 PF12680 SnoaL-like domain A4U88_RS10935 PF01042 Endoribonuclease L-PSP A4U88_RS10940 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase A4U88_RS10945 PF07883 Cupin domain A4U88_RS10950 PF03594 A4U88_RS10950 A4U88_RS10955 PF01381 Helix-turn-helix A4U88_RS10955 PF07883 Cupin domain A4U88_RS10960 PF00326 Prolyl oligopeptidase family A4U88_RS10960 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A4U88_RS10970 PF00854 POT family A4U88_RS10975 PF00633 Helix-hairpin-helix motif A4U88_RS10975 PF00730 HhH-GPD superfamily base excision DNA repair protein A4U88_RS10975 PF10576 Iron-sulfur binding domain of endonuclease III A4U88_RS10980 PF02508 A4U88_RS10980 A4U88_RS10985 PF04205 FMN-binding domain A4U88_RS10990 PF03116 A4U88_RS10990 A4U88_RS11000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A4U88_RS11000 PF10531 SLBB domain A4U88_RS11000 PF13237 4Fe-4S dicluster domain A4U88_RS11000 PF13375 RnfC Barrel sandwich hybrid domain A4U88_RS11005 PF04060 Putative Fe-S cluster A4U88_RS11005 PF14697 4Fe-4S dicluster domain A4U88_RS11015 PF10754 A4U88_RS11015 A4U88_RS11025 PF13593 SBF-like CPA transporter family (DUF4137) A4U88_RS11030 PF13521 AAA domain A4U88_RS11035 PF00962 Adenosine/AMP deaminase A4U88_RS11040 PF00455 A4U88_RS11040 A4U88_RS11040 PF08220 DeoR-like helix-turn-helix domain A4U88_RS11055 PF00155 Aminotransferase class I and II A4U88_RS11060 PF00367 phosphotransferase system, EIIB A4U88_RS11060 PF02378 Phosphotransferase system, EIIC A4U88_RS11065 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS11065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A4U88_RS11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS11070 PF03466 LysR substrate binding domain A4U88_RS11075 PF00144 Beta-lactamase A4U88_RS11080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS11080 PF03466 LysR substrate binding domain A4U88_RS11085 PF00144 Beta-lactamase A4U88_RS11090 PF06097 A4U88_RS11090 A4U88_RS11095 PF01238 Phosphomannose isomerase type I A4U88_RS11105 PF00206 Lyase A4U88_RS11105 PF10415 Fumarase C C-terminus A4U88_RS11110 PF00578 AhpC/TSA family A4U88_RS11115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS11115 PF03466 LysR substrate binding domain A4U88_RS11120 PF08279 HTH domain A4U88_RS11120 PF13280 A4U88_RS11120 A4U88_RS11125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS11130 PF05472 DNA replication terminus site-binding protein (Ter protein) A4U88_RS11135 PF00933 Glycosyl hydrolase family 3 N terminal domain A4U88_RS11135 PF01915 Glycosyl hydrolase family 3 C-terminal domain A4U88_RS11140 PF02638 A4U88_RS11140 A4U88_RS11145 PF07690 Major Facilitator Superfamily A4U88_RS11150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS11150 PF03466 LysR substrate binding domain A4U88_RS11160 PF13500 AAA domain A4U88_RS11165 PF11158 A4U88_RS11165 A4U88_RS11170 PF13411 MerR HTH family regulatory protein A4U88_RS11175 PF00654 Voltage gated chloride channel A4U88_RS11180 PF00005 ABC transporter A4U88_RS11180 PF00571 CBS domain A4U88_RS11185 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS11190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A4U88_RS11195 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS11200 PF07690 Major Facilitator Superfamily A4U88_RS11205 PF06649 A4U88_RS11205 A4U88_RS11210 PF06932 A4U88_RS11210 A4U88_RS11215 PF02694 A4U88_RS11215 A4U88_RS11220 PF00106 short chain dehydrogenase A4U88_RS11225 PF13302 Acetyltransferase (GNAT) domain A4U88_RS11230 PF00593 TonB dependent receptor A4U88_RS11230 PF07660 Secretin and TonB N terminus short domain A4U88_RS11230 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS11235 PF04773 FecR protein A4U88_RS11235 PF16220 A4U88_RS11235 A4U88_RS11240 PF04542 Sigma-70 region 2 A4U88_RS11240 PF08281 Sigma-70, region 4 A4U88_RS11250 PF13437 HlyD family secretion protein A4U88_RS11250 PF13533 Biotin-lipoyl like A4U88_RS11270 PF00501 AMP-binding enzyme A4U88_RS11270 PF00550 Phosphopantetheine attachment site A4U88_RS11270 PF00668 Condensation domain A4U88_RS11270 PF00975 Thioesterase domain A4U88_RS11270 PF13193 AMP-binding enzyme C-terminal domain A4U88_RS11270 PF13745 HxxPF-repeated domain A4U88_RS11275 PF00501 AMP-binding enzyme A4U88_RS11275 PF00550 Phosphopantetheine attachment site A4U88_RS11275 PF00668 Condensation domain A4U88_RS11280 PF02794 A4U88_RS11280 A4U88_RS11300 PF01432 Peptidase family M3 A4U88_RS11310 PF07690 Major Facilitator Superfamily A4U88_RS11315 PF00857 Isochorismatase family A4U88_RS11325 PF12697 Alpha/beta hydrolase family A4U88_RS11330 PF01494 FAD binding domain A4U88_RS11340 PF13463 Winged helix DNA-binding domain A4U88_RS11345 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS11345 PF01799 [2Fe-2S] binding domain A4U88_RS11355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS11355 PF03466 LysR substrate binding domain A4U88_RS11360 PF01925 A4U88_RS11360 A4U88_RS11375 PF00005 ABC transporter A4U88_RS11375 PF00664 ABC transporter transmembrane region A4U88_RS11375 PF03412 Peptidase C39 family A4U88_RS11380 PF03576 Peptidase family S58 A4U88_RS11385 PF04951 D-aminopeptidase A4U88_RS11395 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS11395 PF01799 [2Fe-2S] binding domain A4U88_RS11400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A4U88_RS11405 PF00190 Cupin A4U88_RS11405 PF10518 TAT (twin-arginine translocation) pathway signal sequence A4U88_RS11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS11410 PF03466 LysR substrate binding domain A4U88_RS11415 PF02417 A4U88_RS11415 A4U88_RS11420 PF02417 A4U88_RS11420 A4U88_RS11425 PF02974 Protease inhibitor Inh A4U88_RS11435 PF01872 RibD C-terminal domain A4U88_RS11440 PF00561 alpha/beta hydrolase fold A4U88_RS11445 PF08786 Domain of unknown function (DUF1795) A4U88_RS11450 PF03527 A4U88_RS11450 A4U88_RS11450 PF05488 PAAR motif A4U88_RS11450 PF05593 A4U88_RS11450 A4U88_RS11460 PF15428 A4U88_RS11460 A4U88_RS11465 PF03527 A4U88_RS11465 A4U88_RS11475 PF03527 A4U88_RS11475 A4U88_RS11475 PF15633 A4U88_RS11475 A4U88_RS11485 PF02567 Phenazine biosynthesis-like protein A4U88_RS11490 PF00892 EamA-like transporter family A4U88_RS11495 PF12833 Helix-turn-helix domain A4U88_RS11510 PF12680 SnoaL-like domain A4U88_RS11515 PF07690 Major Facilitator Superfamily A4U88_RS11520 PF00857 Isochorismatase family A4U88_RS11525 PF13515 A4U88_RS11525 A4U88_RS11530 PF13463 Winged helix DNA-binding domain A4U88_RS11535 PF15940 A4U88_RS11535 A4U88_RS11540 PF00905 Penicillin binding protein transpeptidase domain A4U88_RS11540 PF03717 Penicillin-binding Protein dimerisation domain A4U88_RS11545 PF00905 Penicillin binding protein transpeptidase domain A4U88_RS11545 PF03717 Penicillin-binding Protein dimerisation domain A4U88_RS11565 PF05433 A4U88_RS11565 A4U88_RS11570 PF04248 Domain of unknown function (DUF427) A4U88_RS11575 PF02082 Transcriptional regulator A4U88_RS11580 PF10766 Protein of unknown function (DUF2592) A4U88_RS11585 PF00005 ABC transporter A4U88_RS11590 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS11595 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS11600 PF00296 Luciferase-like monooxygenase A4U88_RS11605 PF03972 MmgE/PrpD family A4U88_RS11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS11610 PF03466 LysR substrate binding domain A4U88_RS11620 PF07690 Major Facilitator Superfamily A4U88_RS11625 PF07859 alpha/beta hydrolase fold A4U88_RS11630 PF00455 A4U88_RS11630 A4U88_RS11630 PF08220 DeoR-like helix-turn-helix domain A4U88_RS11635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4U88_RS11635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A4U88_RS11645 PF01872 RibD C-terminal domain A4U88_RS11650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS11655 PF01402 Ribbon-helix-helix protein, copG family A4U88_RS11660 PF01564 Spermine/spermidine synthase A4U88_RS11665 PF07977 FabA-like domain A4U88_RS11670 PF03350 A4U88_RS11670 A4U88_RS11675 PF07690 Major Facilitator Superfamily A4U88_RS11680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS11680 PF03466 LysR substrate binding domain A4U88_RS11685 PF10262 Rdx family A4U88_RS11700 PF00753 Metallo-beta-lactamase superfamily A4U88_RS11700 PF04273 Putative phosphatase (DUF442) A4U88_RS11705 PF00107 Zinc-binding dehydrogenase A4U88_RS11705 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS11715 PF00158 Sigma-54 interaction domain A4U88_RS11715 PF01590 GAF domain A4U88_RS11715 PF02954 Bacterial regulatory protein, Fis family A4U88_RS11720 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS11725 PF07690 Major Facilitator Superfamily A4U88_RS11735 PF07690 Major Facilitator Superfamily A4U88_RS11745 PF04055 Radical SAM superfamily A4U88_RS11750 PF00535 Glycosyl transferase family 2 A4U88_RS11760 PF00563 EAL domain A4U88_RS11760 PF00990 GGDEF domain A4U88_RS11760 PF08447 PAS fold A4U88_RS11760 PF08448 PAS fold A4U88_RS11765 PF08548 Peptidase M10 serralysin C terminal A4U88_RS11770 PF02974 Protease inhibitor Inh A4U88_RS11780 PF04055 Radical SAM superfamily A4U88_RS11780 PF13353 4Fe-4S single cluster domain A4U88_RS11785 PF05402 Coenzyme PQQ synthesis protein D (PqqD) A4U88_RS11790 PF03070 TENA/THI-4/PQQC family A4U88_RS11795 PF12706 Beta-lactamase superfamily domain A4U88_RS11800 PF08042 A4U88_RS11800 A4U88_RS11810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS11810 PF03466 LysR substrate binding domain A4U88_RS11815 PF00282 Pyridoxal-dependent decarboxylase conserved domain A4U88_RS11820 PF00202 Aminotransferase class-III A4U88_RS11830 PF13411 MerR HTH family regulatory protein A4U88_RS11835 PF00113 Enolase, C-terminal TIM barrel domain A4U88_RS11835 PF03952 Enolase, N-terminal domain A4U88_RS11845 PF01368 DHH family A4U88_RS11845 PF02833 DHHA2 domain A4U88_RS11850 PF00990 GGDEF domain A4U88_RS11850 PF01590 GAF domain A4U88_RS11850 PF08447 PAS fold A4U88_RS11850 PF08448 PAS fold A4U88_RS11860 PF09391 Protein of unknown function (DUF2000) A4U88_RS11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS11865 PF03466 LysR substrate binding domain A4U88_RS11870 PF07690 Major Facilitator Superfamily A4U88_RS11885 PF02311 AraC-like ligand binding domain A4U88_RS11885 PF12833 Helix-turn-helix domain A4U88_RS11890 PF13091 PLD-like domain A4U88_RS11895 PF01261 Xylose isomerase-like TIM barrel A4U88_RS11895 PF07582 AP endonuclease family 2 C terminus A4U88_RS11900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4U88_RS11900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A4U88_RS11910 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS11910 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A4U88_RS11920 PF14534 Domain of unknown function (DUF4440) A4U88_RS11925 PF04229 GrpB protein A4U88_RS11930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS11935 PF04073 Aminoacyl-tRNA editing domain A4U88_RS11945 PF07995 Glucose / Sorbosone dehydrogenase A4U88_RS11950 PF13649 Methyltransferase domain A4U88_RS11955 PF11162 A4U88_RS11955 A4U88_RS11960 PF00593 TonB dependent receptor A4U88_RS11960 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS11965 PF03466 LysR substrate binding domain A4U88_RS11970 PF02525 Flavodoxin-like fold A4U88_RS11975 PF01638 HxlR-like helix-turn-helix A4U88_RS11980 PF05977 Transmembrane secretion effector A4U88_RS11990 PF03621 MbtH-like protein A4U88_RS11995 PF00756 Putative esterase A4U88_RS11995 PF11806 Domain of unknown function (DUF3327) A4U88_RS12000 PF00593 TonB dependent receptor A4U88_RS12000 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS12005 PF08348 A4U88_RS12005 A4U88_RS12005 PF13309 A4U88_RS12005 A4U88_RS12010 PF00324 Amino acid permease A4U88_RS12015 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4U88_RS12015 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A4U88_RS12025 PF01965 DJ-1/PfpI family A4U88_RS12030 PF16576 A4U88_RS12030 A4U88_RS12040 PF02321 Outer membrane efflux protein A4U88_RS12045 PF00122 E1-E2 ATPase A4U88_RS12045 PF00403 Heavy-metal-associated domain A4U88_RS12045 PF00702 haloacid dehalogenase-like hydrolase A4U88_RS12050 PF00376 MerR family regulatory protein A4U88_RS12050 PF09278 MerR, DNA binding A4U88_RS12055 PF00403 Heavy-metal-associated domain A4U88_RS12060 PF07377 Protein of unknown function (DUF1493) A4U88_RS12065 PF02321 Outer membrane efflux protein A4U88_RS12070 PF00873 AcrB/AcrD/AcrF family A4U88_RS12080 PF07690 Major Facilitator Superfamily A4U88_RS12090 PF01614 Bacterial transcriptional regulator A4U88_RS12090 PF09339 IclR helix-turn-helix domain A4U88_RS12095 PF13489 Methyltransferase domain A4U88_RS12100 PF04371 Porphyromonas-type peptidyl-arginine deiminase A4U88_RS12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS12105 PF03466 LysR substrate binding domain A4U88_RS12110 PF01019 Gamma-glutamyltranspeptidase A4U88_RS12120 PF01841 Transglutaminase-like superfamily A4U88_RS12120 PF12969 Domain of Unknown Function with PDB structure (DUF3857) A4U88_RS12125 PF01381 Helix-turn-helix A4U88_RS12135 PF00881 Nitroreductase family A4U88_RS12140 PF00034 Cytochrome c A4U88_RS12140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A4U88_RS12145 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase A4U88_RS12150 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS12150 PF01799 [2Fe-2S] binding domain A4U88_RS12155 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS12155 PF02909 Tetracyclin repressor, C-terminal all-alpha domain A4U88_RS12160 PF07690 Major Facilitator Superfamily A4U88_RS12165 PF09084 NMT1/THI5 like A4U88_RS12170 PF01380 SIS domain A4U88_RS12170 PF01418 Helix-turn-helix domain, rpiR family A4U88_RS12175 PF00232 Glycosyl hydrolase family 1 A4U88_RS12180 PF00291 Pyridoxal-phosphate dependent enzyme A4U88_RS12185 PF01988 A4U88_RS12185 A4U88_RS12190 PF06983 3-demethylubiquinone-9 3-methyltransferase A4U88_RS12195 PF07237 Protein of unknown function (DUF1428) A4U88_RS12200 PF00990 GGDEF domain A4U88_RS12205 PF00583 Acetyltransferase (GNAT) family A4U88_RS12215 PF00924 Mechanosensitive ion channel A4U88_RS12215 PF12607 A4U88_RS12215 A4U88_RS12220 PF00005 ABC transporter A4U88_RS12225 PF00459 Inositol monophosphatase family A4U88_RS12230 PF01545 Cation efflux family A4U88_RS12230 PF16916 A4U88_RS12230 A4U88_RS12240 PF00571 CBS domain A4U88_RS12240 PF01769 Divalent cation transporter A4U88_RS12245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS12250 PF13343 Bacterial extracellular solute-binding protein A4U88_RS12255 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS12260 PF00005 ABC transporter A4U88_RS12265 PF00561 alpha/beta hydrolase fold A4U88_RS12270 PF05957 A4U88_RS12270 A4U88_RS12275 PF00009 Elongation factor Tu GTP binding domain A4U88_RS12275 PF00679 Elongation factor G C-terminus A4U88_RS12275 PF03144 Elongation factor Tu domain 2 A4U88_RS12275 PF03764 Elongation factor G, domain IV A4U88_RS12275 PF14492 Elongation Factor G, domain II A4U88_RS12280 PF00892 EamA-like transporter family A4U88_RS12285 PF02311 AraC-like ligand binding domain A4U88_RS12285 PF12833 Helix-turn-helix domain A4U88_RS12290 PF00171 Aldehyde dehydrogenase family A4U88_RS12300 PF00561 alpha/beta hydrolase fold A4U88_RS12305 PF01261 Xylose isomerase-like TIM barrel A4U88_RS12305 PF07582 AP endonuclease family 2 C terminus A4U88_RS12310 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS12315 PF07883 Cupin domain A4U88_RS12320 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A4U88_RS12325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS12325 PF03466 LysR substrate binding domain A4U88_RS12330 PF02653 A4U88_RS12330 A4U88_RS12335 PF02653 A4U88_RS12335 A4U88_RS12340 PF00005 ABC transporter A4U88_RS12340 PF12399 Branched-chain amino acid ATP-binding cassette transporter A4U88_RS12345 PF00005 ABC transporter A4U88_RS12350 PF13458 Periplasmic binding protein A4U88_RS12355 PF14196 A4U88_RS12355 A4U88_RS12365 PF12840 Helix-turn-helix domain A4U88_RS12370 PF08327 Activator of Hsp90 ATPase homolog 1-like protein A4U88_RS12375 PF01544 CorA-like Mg2+ transporter protein A4U88_RS12380 PF01384 A4U88_RS12380 A4U88_RS12385 PF03976 Polyphosphate kinase 2 (PPK2) A4U88_RS12390 PF00293 NUDIX domain A4U88_RS12395 PF00768 D-alanyl-D-alanine carboxypeptidase A4U88_RS12400 PF00296 Luciferase-like monooxygenase A4U88_RS12405 PF00155 Aminotransferase class I and II A4U88_RS12405 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS12415 PF00117 Glutamine amidotransferase class-I A4U88_RS12420 PF08543 Phosphomethylpyrimidine kinase A4U88_RS12425 PF07238 PilZ domain A4U88_RS12425 PF07317 Flagellar regulator YcgR A4U88_RS12440 PF13320 A4U88_RS12440 A4U88_RS12445 PF01547 Bacterial extracellular solute-binding protein A4U88_RS12450 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS12455 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS12460 PF00005 ABC transporter A4U88_RS12460 PF08402 TOBE domain A4U88_RS12465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4U88_RS12465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A4U88_RS12470 PF00480 ROK family A4U88_RS12475 PF00455 A4U88_RS12475 A4U88_RS12475 PF08220 DeoR-like helix-turn-helix domain A4U88_RS12485 PF01116 Fructose-bisphosphate aldolase class-II A4U88_RS12495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A4U88_RS12495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A4U88_RS12500 PF00027 Cyclic nucleotide-binding domain A4U88_RS12500 PF13545 Crp-like helix-turn-helix domain A4U88_RS12505 PF00582 Universal stress protein family A4U88_RS12510 PF02233 NAD(P) transhydrogenase beta subunit A4U88_RS12515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A4U88_RS12515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A4U88_RS12515 PF12769 Domain of unknown function (DUF3814) A4U88_RS12520 PF07338 Protein of unknown function (DUF1471) A4U88_RS12525 PF13520 Amino acid permease A4U88_RS12535 PF01243 Pyridoxamine 5'-phosphate oxidase A4U88_RS12545 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS12550 PF00072 Response regulator receiver domain A4U88_RS12550 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS12560 PF02074 Carboxypeptidase Taq (M32) metallopeptidase A4U88_RS12565 PF12146 Putative lysophospholipase A4U88_RS12570 PF06392 A4U88_RS12570 A4U88_RS12575 PF00089 Trypsin A4U88_RS12580 PF00270 DEAD/DEAH box helicase A4U88_RS12580 PF00271 Helicase conserved C-terminal domain A4U88_RS12580 PF04408 Helicase associated domain (HA2) A4U88_RS12580 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold A4U88_RS12580 PF11898 A4U88_RS12580 A4U88_RS12585 PF02525 Flavodoxin-like fold A4U88_RS12590 PF07027 A4U88_RS12590 A4U88_RS12595 PF13617 A4U88_RS12595 A4U88_RS12600 PF11739 A4U88_RS12600 A4U88_RS12605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4U88_RS12605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4U88_RS12610 PF03724 META domain A4U88_RS12615 PF03891 A4U88_RS12615 A4U88_RS12620 PF00893 Small Multidrug Resistance protein A4U88_RS12625 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase A4U88_RS12625 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A4U88_RS12625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U88_RS12625 PF10371 Domain of unknown function A4U88_RS12625 PF12838 4Fe-4S dicluster domain A4U88_RS12625 PF17147 A4U88_RS12625 A4U88_RS12630 PF01171 PP-loop family A4U88_RS12635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS12660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS12670 PF00246 Zinc carboxypeptidase A4U88_RS12675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A4U88_RS12675 PF13378 Enolase C-terminal domain-like A4U88_RS12680 PF08534 Redoxin A4U88_RS12685 PF00158 Sigma-54 interaction domain A4U88_RS12685 PF00989 PAS fold A4U88_RS12690 PF05128 A4U88_RS12690 A4U88_RS12695 PF04317 A4U88_RS12695 A4U88_RS12700 PF09584 A4U88_RS12700 A4U88_RS12705 PF04024 A4U88_RS12705 A4U88_RS12710 PF06667 A4U88_RS12710 A4U88_RS12715 PF04012 A4U88_RS12715 A4U88_RS12720 PF00158 Sigma-54 interaction domain A4U88_RS12720 PF02954 Bacterial regulatory protein, Fis family A4U88_RS12730 PF02492 CobW/HypB/UreG, nucleotide-binding domain A4U88_RS12730 PF07683 Cobalamin synthesis protein cobW C-terminal domain A4U88_RS12735 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS12740 PF02649 Type I GTP cyclohydrolase folE2 A4U88_RS12750 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS12755 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS12755 PF12911 A4U88_RS12755 A4U88_RS12760 PF00005 ABC transporter A4U88_RS12760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U88_RS12765 PF00005 ABC transporter A4U88_RS12775 PF02627 Carboxymuconolactone decarboxylase family A4U88_RS12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS12780 PF03466 LysR substrate binding domain A4U88_RS12785 PF00768 D-alanyl-D-alanine carboxypeptidase A4U88_RS12785 PF07943 Penicillin-binding protein 5, C-terminal domain A4U88_RS12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS12795 PF03466 LysR substrate binding domain A4U88_RS12800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS12805 PF00575 S1 RNA binding domain A4U88_RS12805 PF00773 RNB domain A4U88_RS12805 PF08206 Ribonuclease B OB domain A4U88_RS12810 PF07690 Major Facilitator Superfamily A4U88_RS12815 PF01546 Peptidase family M20/M25/M40 A4U88_RS12815 PF07687 Peptidase dimerisation domain A4U88_RS12825 PF00923 Transaldolase A4U88_RS12830 PF04055 Radical SAM superfamily A4U88_RS12830 PF13353 4Fe-4S single cluster domain A4U88_RS12835 PF01228 Glycine radical A4U88_RS12835 PF02901 Pyruvate formate lyase A4U88_RS12840 PF00455 A4U88_RS12840 A4U88_RS12840 PF08220 DeoR-like helix-turn-helix domain A4U88_RS12845 PF05433 A4U88_RS12845 A4U88_RS12850 PF01253 Translation initiation factor SUI1 A4U88_RS12855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A4U88_RS12860 PF07338 Protein of unknown function (DUF1471) A4U88_RS12865 PF03869 Arc-like DNA binding domain A4U88_RS12870 PF13176 Tetratricopeptide repeat A4U88_RS12870 PF13432 Tetratricopeptide repeat A4U88_RS12870 PF14559 Tetratricopeptide repeat A4U88_RS12875 PF06305 A4U88_RS12875 A4U88_RS12880 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS12890 PF02653 A4U88_RS12890 A4U88_RS12900 PF10054 Predicted periplasmic lipoprotein (DUF2291) A4U88_RS12910 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS12915 PF02779 Transketolase, pyrimidine binding domain A4U88_RS12915 PF02780 Transketolase, C-terminal domain A4U88_RS12920 PF00456 Transketolase, thiamine diphosphate binding domain A4U88_RS12930 PF01569 PAP2 superfamily A4U88_RS12935 PF00925 GTP cyclohydrolase II A4U88_RS12940 PF00330 Aconitase family (aconitate hydratase) A4U88_RS12940 PF00694 Aconitase C-terminal domain A4U88_RS12950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS12950 PF03466 LysR substrate binding domain A4U88_RS12960 PF01131 DNA topoisomerase A4U88_RS12960 PF01396 A4U88_RS12960 A4U88_RS12960 PF01751 Toprim domain A4U88_RS12960 PF08272 Topoisomerase I zinc-ribbon-like A4U88_RS12965 PF10692 Protein of unknown function (DUF2498) A4U88_RS12970 PF01343 Peptidase family S49 A4U88_RS12970 PF08496 A4U88_RS12970 A4U88_RS12975 PF00106 short chain dehydrogenase A4U88_RS12980 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP A4U88_RS12980 PF12557 Cob(I)alamin adenosyltransferase N terminal A4U88_RS12985 PF00849 RNA pseudouridylate synthase A4U88_RS12985 PF01479 S4 domain A4U88_RS12990 PF00561 alpha/beta hydrolase fold A4U88_RS13000 PF01300 Telomere recombination A4U88_RS13005 PF02811 PHP domain A4U88_RS13010 PF00425 chorismate binding enzyme A4U88_RS13010 PF04715 Anthranilate synthase component I, N terminal region A4U88_RS13015 PF00117 Glutamine amidotransferase class-I A4U88_RS13020 PF00591 Glycosyl transferase family, a/b domain A4U88_RS13020 PF02885 Glycosyl transferase family, helical bundle domain A4U88_RS13025 PF00218 Indole-3-glycerol phosphate synthase A4U88_RS13025 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A4U88_RS13030 PF00291 Pyridoxal-phosphate dependent enzyme A4U88_RS13035 PF00290 Tryptophan synthase alpha chain A4U88_RS13040 PF04972 BON domain A4U88_RS13045 PF03922 OmpW family A4U88_RS13055 PF06790 A4U88_RS13055 A4U88_RS13060 PF00916 A4U88_RS13060 A4U88_RS13060 PF01740 STAS domain A4U88_RS13065 PF04279 A4U88_RS13065 A4U88_RS13070 PF03061 Thioesterase superfamily A4U88_RS13075 PF03544 Gram-negative bacterial TonB protein C-terminal A4U88_RS13075 PF16031 A4U88_RS13075 A4U88_RS13080 PF02677 A4U88_RS13080 A4U88_RS13085 PF03795 YCII-related domain A4U88_RS13090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS13090 PF03466 LysR substrate binding domain A4U88_RS13095 PF00892 EamA-like transporter family A4U88_RS13100 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS13100 PF13407 Periplasmic binding protein domain A4U88_RS13115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A4U88_RS13115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A4U88_RS13120 PF00005 ABC transporter A4U88_RS13125 PF02653 A4U88_RS13125 A4U88_RS13135 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS13140 PF07690 Major Facilitator Superfamily A4U88_RS13145 PF00210 Ferritin-like domain A4U88_RS13160 PF13091 PLD-like domain A4U88_RS13160 PF13396 A4U88_RS13160 A4U88_RS13165 PF04269 Protein of unknown function, DUF440 A4U88_RS13170 PF00005 ABC transporter A4U88_RS13170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U88_RS13175 PF00005 ABC transporter A4U88_RS13175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U88_RS13180 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS13180 PF12911 A4U88_RS13180 A4U88_RS13185 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS13190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS13195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS13200 PF01914 A4U88_RS13200 A4U88_RS13205 PF00171 Aldehyde dehydrogenase family A4U88_RS13205 PF00465 Iron-containing alcohol dehydrogenase A4U88_RS13210 PF00265 Thymidine kinase A4U88_RS13215 PF00816 H-NS histone family A4U88_RS13220 PF16363 A4U88_RS13220 A4U88_RS13225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A4U88_RS13225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A4U88_RS13225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A4U88_RS13230 PF00483 Nucleotidyl transferase A4U88_RS13235 PF00072 Response regulator receiver domain A4U88_RS13240 PF01734 Patatin-like phospholipase A4U88_RS13245 PF02810 SEC-C motif A4U88_RS13250 PF00551 Formyl transferase A4U88_RS13250 PF01842 ACT domain A4U88_RS13275 PF03641 Possible lysine decarboxylase A4U88_RS13280 PF03372 Endonuclease/Exonuclease/phosphatase family A4U88_RS13285 PF00293 NUDIX domain A4U88_RS13290 PF07383 A4U88_RS13290 A4U88_RS13295 PF01131 DNA topoisomerase A4U88_RS13295 PF01751 Toprim domain A4U88_RS13305 PF00586 AIR synthase related protein, N-terminal domain A4U88_RS13305 PF02769 AIR synthase related protein, C-terminal domain A4U88_RS13310 PF00881 Nitroreductase family A4U88_RS13315 PF01343 Peptidase family S49 A4U88_RS13320 PF00710 Asparaginase A4U88_RS13325 PF00857 Isochorismatase family A4U88_RS13335 PF07023 A4U88_RS13335 A4U88_RS13340 PF01641 SelR domain A4U88_RS13350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4U88_RS13350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A4U88_RS13355 PF01263 Aldose 1-epimerase A4U88_RS13360 PF06629 A4U88_RS13360 A4U88_RS13365 PF06798 A4U88_RS13365 A4U88_RS13365 PF08298 PrkA AAA domain A4U88_RS13370 PF04285 A4U88_RS13370 A4U88_RS13380 PF12697 Alpha/beta hydrolase family A4U88_RS13385 PF10753 A4U88_RS13385 A4U88_RS13405 PF16473 A4U88_RS13405 A4U88_RS13415 PF00842 Alanine racemase, C-terminal domain A4U88_RS13415 PF01168 Alanine racemase, N-terminal domain A4U88_RS13425 PF03992 Antibiotic biosynthesis monooxygenase A4U88_RS13430 PF09223 YodA lipocalin-like domain A4U88_RS13435 PF04293 A4U88_RS13435 A4U88_RS13440 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS13440 PF07840 FadR C-terminal domain A4U88_RS13445 PF06450 A4U88_RS13445 A4U88_RS13450 PF02600 Disulfide bond formation protein DsbB A4U88_RS13455 PF05118 Aspartyl/Asparaginyl beta-hydroxylase A4U88_RS13460 PF03692 A4U88_RS13460 A4U88_RS13465 PF01557 Fumarylacetoacetate (FAA) hydrolase family A4U88_RS13470 PF13406 Transglycosylase SLT domain A4U88_RS13475 PF05166 YcgL domain A4U88_RS13480 PF03775 Septum formation inhibitor MinC, C-terminal domain A4U88_RS13480 PF05209 Septum formation inhibitor MinC, N-terminal domain A4U88_RS13485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A4U88_RS13490 PF03776 Septum formation topological specificity factor MinE A4U88_RS13495 PF00570 HRDC domain A4U88_RS13495 PF01612 3'-5' exonuclease A4U88_RS13500 PF00501 AMP-binding enzyme A4U88_RS13500 PF13193 AMP-binding enzyme C-terminal domain A4U88_RS13505 PF03843 A4U88_RS13505 A4U88_RS13510 PF00814 Glycoprotease family A4U88_RS13515 PF00270 DEAD/DEAH box helicase A4U88_RS13515 PF06733 DEAD_2 A4U88_RS13515 PF13307 Helicase C-terminal domain A4U88_RS13520 PF01042 Endoribonuclease L-PSP A4U88_RS13525 PF00893 Small Multidrug Resistance protein A4U88_RS13530 PF00893 Small Multidrug Resistance protein A4U88_RS13535 PF01081 KDPG and KHG aldolase A4U88_RS13540 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A4U88_RS13540 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A4U88_RS13545 PF01380 SIS domain A4U88_RS13545 PF01418 Helix-turn-helix domain, rpiR family A4U88_RS13550 PF00224 Pyruvate kinase, barrel domain A4U88_RS13550 PF02887 Pyruvate kinase, alpha/beta domain A4U88_RS13555 PF13516 Leucine Rich repeat A4U88_RS13555 PF13855 Leucine rich repeat A4U88_RS13560 PF03279 A4U88_RS13560 A4U88_RS13565 PF01551 Peptidase family M23 A4U88_RS13565 PF04225 Opacity-associated protein A LysM-like domain A4U88_RS13565 PF08525 A4U88_RS13565 A4U88_RS13570 PF01297 Periplasmic solute binding protein family A4U88_RS13575 PF00005 ABC transporter A4U88_RS13580 PF00950 A4U88_RS13580 A4U88_RS13585 PF05491 Holliday junction DNA helicase ruvB C-terminus A4U88_RS13585 PF05496 Holliday junction DNA helicase ruvB N-terminus A4U88_RS13590 PF01330 RuvA N terminal domain A4U88_RS13590 PF07499 RuvA, C-terminal domain A4U88_RS13590 PF14520 Helix-hairpin-helix domain A4U88_RS13595 PF02075 Crossover junction endodeoxyribonuclease RuvC A4U88_RS13600 PF01709 Transcriptional regulator A4U88_RS13605 PF00293 NUDIX domain A4U88_RS13610 PF00152 tRNA synthetases class II (D, K and N) A4U88_RS13610 PF01336 OB-fold nucleic acid binding domain A4U88_RS13610 PF02938 GAD domain A4U88_RS13615 PF09723 A4U88_RS13615 A4U88_RS13620 PF00857 Isochorismatase family A4U88_RS13625 PF01904 Protein of unknown function DUF72 A4U88_RS13630 PF01124 MAPEG family A4U88_RS13635 PF13649 Methyltransferase domain A4U88_RS13640 PF08003 Protein of unknown function (DUF1698) A4U88_RS13645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U88_RS13645 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A4U88_RS13660 PF03932 CutC family A4U88_RS13665 PF00155 Aminotransferase class I and II A4U88_RS13670 PF06185 YecM protein A4U88_RS13675 PF00750 tRNA synthetases class I (R) A4U88_RS13675 PF03485 Arginyl tRNA synthetase N terminal domain A4U88_RS13675 PF05746 DALR anticodon binding domain A4U88_RS13680 PF03023 A4U88_RS13680 A4U88_RS13685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4U88_RS13690 PF04337 Protein of unknown function, DUF480 A4U88_RS13695 PF13302 Acetyltransferase (GNAT) domain A4U88_RS13700 PF07690 Major Facilitator Superfamily A4U88_RS13710 PF04399 Glutaredoxin 2, C terminal domain A4U88_RS13710 PF13417 Glutathione S-transferase, N-terminal domain A4U88_RS13715 PF03109 A4U88_RS13715 A4U88_RS13720 PF07273 Protein of unknown function (DUF1439) A4U88_RS13725 PF13995 YebF-like protein A4U88_RS13730 PF04266 ASCH domain A4U88_RS13735 PF07130 YebG protein A4U88_RS13740 PF00270 DEAD/DEAH box helicase A4U88_RS13740 PF00271 Helicase conserved C-terminal domain A4U88_RS13740 PF03880 DbpA RNA binding domain A4U88_RS13745 PF00313 'Cold-shock' DNA-binding domain A4U88_RS13750 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS13750 PF02222 ATP-grasp domain A4U88_RS13755 PF03701 A4U88_RS13755 A4U88_RS13760 PF00535 Glycosyl transferase family 2 A4U88_RS13765 PF00425 chorismate binding enzyme A4U88_RS13765 PF04715 Anthranilate synthase component I, N terminal region A4U88_RS13770 PF00293 NUDIX domain A4U88_RS13775 PF03313 A4U88_RS13775 A4U88_RS13775 PF03315 Serine dehydratase beta chain A4U88_RS13780 PF00563 EAL domain A4U88_RS13780 PF12792 A4U88_RS13780 A4U88_RS13785 PF00571 CBS domain A4U88_RS13785 PF03471 Transporter associated domain A4U88_RS13785 PF03741 A4U88_RS13785 A4U88_RS13795 PF03609 A4U88_RS13795 A4U88_RS13800 PF03613 A4U88_RS13800 A4U88_RS13805 PF06173 A4U88_RS13805 A4U88_RS13810 PF02659 A4U88_RS13810 A4U88_RS13815 PF13847 Methyltransferase domain A4U88_RS13820 PF02578 Multi-copper polyphenol oxidoreductase laccase A4U88_RS13825 PF00313 'Cold-shock' DNA-binding domain A4U88_RS13830 PF10736 A4U88_RS13830 A4U88_RS13835 PF12706 Beta-lactamase superfamily domain A4U88_RS13845 PF00324 Amino acid permease A4U88_RS13850 PF13269 A4U88_RS13850 A4U88_RS13855 PF10765 Protein of unknown function (DUF2591) A4U88_RS13860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS13865 PF13974 A4U88_RS13865 A4U88_RS13870 PF13998 A4U88_RS13870 A4U88_RS13875 PF13996 A4U88_RS13875 A4U88_RS13880 PF10964 A4U88_RS13880 A4U88_RS13885 PF13993 A4U88_RS13885 A4U88_RS13890 PF12833 Helix-turn-helix domain A4U88_RS13895 PF06993 A4U88_RS13895 A4U88_RS13900 PF02678 Pirin A4U88_RS13900 PF05726 Pirin C-terminal cupin domain A4U88_RS13910 PF01476 LysM domain A4U88_RS13910 PF04972 BON domain A4U88_RS13915 PF07358 A4U88_RS13915 A4U88_RS13920 PF10798 Biofilm development protein YmgB/AriR A4U88_RS13925 PF00267 Gram-negative porin A4U88_RS13930 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family A4U88_RS13935 PF04996 Succinylarginine dihydrolase A4U88_RS13940 PF00171 Aldehyde dehydrogenase family A4U88_RS13945 PF04958 Arginine N-succinyltransferase beta subunit A4U88_RS13950 PF00202 Aminotransferase class-III A4U88_RS13955 PF07859 alpha/beta hydrolase fold A4U88_RS13960 PF00005 ABC transporter A4U88_RS13960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U88_RS13965 PF00005 ABC transporter A4U88_RS13965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U88_RS13970 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS13970 PF12911 A4U88_RS13970 A4U88_RS13975 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS13980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS13985 PF00155 Aminotransferase class I and II A4U88_RS13985 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS13990 PF01654 A4U88_RS13990 A4U88_RS13995 PF02322 A4U88_RS13995 A4U88_RS14000 PF10617 A4U88_RS14000 A4U88_RS14015 PF00487 A4U88_RS14015 A4U88_RS14020 PF00487 A4U88_RS14020 A4U88_RS14025 PF04116 A4U88_RS14025 A4U88_RS14040 PF00753 Metallo-beta-lactamase superfamily A4U88_RS14045 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS14050 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A4U88_RS14050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A4U88_RS14055 PF02665 Nitrate reductase gamma subunit A4U88_RS14060 PF02613 Nitrate reductase delta subunit A4U88_RS14065 PF13247 4Fe-4S dicluster domain A4U88_RS14065 PF14711 Respiratory nitrate reductase beta C-terminal A4U88_RS14070 PF00384 Molybdopterin oxidoreductase A4U88_RS14070 PF01568 Molydopterin dinucleotide binding domain A4U88_RS14070 PF14710 Respiratory nitrate reductase alpha N-terminal A4U88_RS14080 PF00535 Glycosyl transferase family 2 A4U88_RS14085 PF00534 Glycosyl transferases group 1 A4U88_RS14085 PF13439 Glycosyltransferase Family 4 A4U88_RS14090 PF00535 Glycosyl transferase family 2 A4U88_RS14100 PF14305 A4U88_RS14100 A4U88_RS14105 PF01943 A4U88_RS14105 A4U88_RS14105 PF14667 Polysaccharide biosynthesis C-terminal domain A4U88_RS14110 PF02706 Chain length determinant protein A4U88_RS14110 PF13614 AAA domain A4U88_RS14110 PF13807 A4U88_RS14110 A4U88_RS14115 PF02563 Polysaccharide biosynthesis/export protein A4U88_RS14115 PF10531 SLBB domain A4U88_RS14120 PF00953 Glycosyl transferase family 4 A4U88_RS14125 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS14130 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS14135 PF07690 Major Facilitator Superfamily A4U88_RS14140 PF00672 HAMP domain A4U88_RS14140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS14140 PF07730 Histidine kinase A4U88_RS14140 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term A4U88_RS14145 PF00072 Response regulator receiver domain A4U88_RS14145 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS14150 PF11924 Protein of unknown function (DUF3442) A4U88_RS14155 PF01478 Type IV leader peptidase family A4U88_RS14165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS14170 PF00005 ABC transporter A4U88_RS14175 PF00005 ABC transporter A4U88_RS14180 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS14180 PF12911 A4U88_RS14180 A4U88_RS14185 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS14190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS14195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS14195 PF03466 LysR substrate binding domain A4U88_RS14200 PF04752 A4U88_RS14200 A4U88_RS14205 PF06150 ChaB A4U88_RS14210 PF04954 Siderophore-interacting protein A4U88_RS14210 PF08021 Siderophore-interacting FAD-binding domain A4U88_RS14215 PF01699 Sodium/calcium exchanger protein A4U88_RS14220 PF05118 Aspartyl/Asparaginyl beta-hydroxylase A4U88_RS14225 PF02562 PhoH-like protein A4U88_RS14230 PF04261 Dyp-type peroxidase family A4U88_RS14235 PF09375 Imelysin A4U88_RS14235 PF13473 Cupredoxin-like domain A4U88_RS14240 PF03239 A4U88_RS14240 A4U88_RS14245 PF00474 Sodium:solute symporter family A4U88_RS14250 PF00171 Aldehyde dehydrogenase family A4U88_RS14250 PF01619 Proline dehydrogenase A4U88_RS14250 PF14850 DNA-binding domain of Proline dehydrogenase A4U88_RS14255 PF07927 YcfA-like protein A4U88_RS14260 PF15919 A4U88_RS14260 A4U88_RS14265 PF00005 ABC transporter A4U88_RS14270 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS14275 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS14280 PF00291 Pyridoxal-phosphate dependent enzyme A4U88_RS14285 PF02899 Phage integrase, N-terminal SAM-like domain A4U88_RS14290 PF04539 Sigma-70 region 3 A4U88_RS14290 PF04542 Sigma-70 region 2 A4U88_RS14290 PF04545 Sigma-70, region 4 A4U88_RS14295 PF00669 Bacterial flagellin N-terminal helical region A4U88_RS14295 PF00700 Bacterial flagellin C-terminal helical region A4U88_RS14305 PF02465 A4U88_RS14305 A4U88_RS14305 PF07195 A4U88_RS14305 A4U88_RS14305 PF07196 Flagellin hook IN motif A4U88_RS14310 PF02561 Flagellar protein FliS A4U88_RS14315 PF05400 Flagellar protein FliT A4U88_RS14320 PF12833 Helix-turn-helix domain A4U88_RS14325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS14325 PF03466 LysR substrate binding domain A4U88_RS14330 PF02525 Flavodoxin-like fold A4U88_RS14335 PF02049 A4U88_RS14335 A4U88_RS14340 PF01514 Secretory protein of YscJ/FliF family A4U88_RS14340 PF08345 A4U88_RS14340 A4U88_RS14345 PF01706 FliG C-terminal domain A4U88_RS14345 PF14841 FliG middle domain A4U88_RS14345 PF14842 FliG N-terminal domain A4U88_RS14350 PF02108 A4U88_RS14350 A4U88_RS14355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4U88_RS14360 PF02050 Flagellar FliJ protein A4U88_RS14365 PF02120 Flagellar hook-length control protein FliK A4U88_RS14370 PF03748 A4U88_RS14370 A4U88_RS14375 PF01052 Surface presentation of antigens (SPOA) A4U88_RS14375 PF02154 Flagellar motor switch protein FliM A4U88_RS14380 PF01052 Surface presentation of antigens (SPOA) A4U88_RS14380 PF16973 A4U88_RS14380 A4U88_RS14385 PF04347 A4U88_RS14385 A4U88_RS14390 PF00813 A4U88_RS14390 A4U88_RS14395 PF01313 A4U88_RS14395 A4U88_RS14400 PF01311 A4U88_RS14400 A4U88_RS14415 PF00460 Flagella basal body rod protein A4U88_RS14415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A4U88_RS14420 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A4U88_RS14420 PF10135 A4U88_RS14420 A4U88_RS14425 PF02119 A4U88_RS14425 A4U88_RS14430 PF02107 A4U88_RS14430 A4U88_RS14435 PF00460 Flagella basal body rod protein A4U88_RS14435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A4U88_RS14440 PF00460 Flagella basal body rod protein A4U88_RS14440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A4U88_RS14445 PF00460 Flagella basal body rod protein A4U88_RS14445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A4U88_RS14445 PF07559 Flagellar basal body protein FlaE A4U88_RS14450 PF03963 A4U88_RS14450 A4U88_RS14450 PF13860 FlgD Ig-like domain A4U88_RS14450 PF13861 FlgD Tudor-like domain A4U88_RS14455 PF00460 Flagella basal body rod protein A4U88_RS14455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A4U88_RS14460 PF00460 Flagella basal body rod protein A4U88_RS14465 PF13144 SAF-like A4U88_RS14470 PF04316 Anti-sigma-28 factor, FlgM A4U88_RS14475 PF05130 FlgN protein A4U88_RS14480 PF06296 A4U88_RS14480 A4U88_RS14485 PF01381 Helix-turn-helix A4U88_RS14490 PF06366 A4U88_RS14490 A4U88_RS14500 PF01312 FlhB HrpN YscU SpaS Family A4U88_RS14505 PF01850 PIN domain A4U88_RS14510 PF04014 Antidote-toxin recognition MazE A4U88_RS14515 PF04344 Chemotaxis phosphatase, CheZ A4U88_RS14520 PF00072 Response regulator receiver domain A4U88_RS14525 PF00072 Response regulator receiver domain A4U88_RS14525 PF01339 CheB methylesterase A4U88_RS14535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A4U88_RS14535 PF00672 HAMP domain A4U88_RS14535 PF02203 Tar ligand binding domain homologue A4U88_RS14540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A4U88_RS14540 PF00672 HAMP domain A4U88_RS14540 PF02203 Tar ligand binding domain homologue A4U88_RS14545 PF01584 CheW-like domain A4U88_RS14550 PF01584 CheW-like domain A4U88_RS14550 PF01627 Hpt domain A4U88_RS14550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS14550 PF02895 Signal transducing histidine kinase, homodimeric domain A4U88_RS14550 PF09078 CheY binding A4U88_RS14555 PF00691 OmpA family A4U88_RS14555 PF13677 A4U88_RS14555 A4U88_RS14560 PF01618 A4U88_RS14560 A4U88_RS14570 PF05247 Flagellar transcriptional activator (FlhD) A4U88_RS14575 PF05321 Haemolysin expression modulating protein A4U88_RS14580 PF00582 Universal stress protein family A4U88_RS14585 PF00107 Zinc-binding dehydrogenase A4U88_RS14585 PF16884 A4U88_RS14585 A4U88_RS14590 PF01470 Pyroglutamyl peptidase A4U88_RS14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS14595 PF03466 LysR substrate binding domain A4U88_RS14600 PF05954 Phage late control gene D protein (GPD) A4U88_RS14605 PF12158 A4U88_RS14605 A4U88_RS14615 PF00805 Pentapeptide repeats (8 copies) A4U88_RS14615 PF09937 A4U88_RS14615 A4U88_RS14615 PF13599 Pentapeptide repeats (9 copies) A4U88_RS14620 PF00805 Pentapeptide repeats (8 copies) A4U88_RS14620 PF13599 Pentapeptide repeats (9 copies) A4U88_RS14625 PF12059 A4U88_RS14625 A4U88_RS14630 PF13665 A4U88_RS14630 A4U88_RS14640 PF12790 Type VI secretion lipoprotein A4U88_RS14645 PF05936 A4U88_RS14645 A4U88_RS14650 PF00691 OmpA family A4U88_RS14650 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) A4U88_RS14660 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) A4U88_RS14665 PF06812 A4U88_RS14665 A4U88_RS14675 PF05943 A4U88_RS14675 A4U88_RS14685 PF05638 Protein of unknown function (DUF796) A4U88_RS14695 PF07007 Protein of unknown function (DUF1311) A4U88_RS14700 PF16695 A4U88_RS14700 A4U88_RS14705 PF16695 A4U88_RS14705 A4U88_RS14715 PF00498 FHA domain A4U88_RS14720 PF13672 Protein phosphatase 2C A4U88_RS14730 PF07024 ImpE protein A4U88_RS14735 PF04965 Gene 25-like lysozyme A4U88_RS14740 PF05947 A4U88_RS14740 A4U88_RS14745 PF06996 A4U88_RS14745 A4U88_RS14750 PF00004 ATPase family associated with various cellular activities (AAA) A4U88_RS14750 PF02861 Clp amino terminal domain A4U88_RS14750 PF07724 AAA domain (Cdc48 subfamily) A4U88_RS14750 PF10431 C-terminal, D2-small domain, of ClpB protein A4U88_RS14755 PF00069 Protein kinase domain A4U88_RS14760 PF05954 Phage late control gene D protein (GPD) A4U88_RS14765 PF06445 GyrI-like small molecule binding domain A4U88_RS14770 PF03301 Tryptophan 2,3-dioxygenase A4U88_RS14775 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS14775 PF13377 Periplasmic binding protein-like domain A4U88_RS14790 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS14795 PF05025 RbsD / FucU transport protein family A4U88_RS14805 PF00817 impB/mucB/samB family A4U88_RS14805 PF11799 impB/mucB/samB family C-terminal domain A4U88_RS14805 PF13438 A4U88_RS14805 A4U88_RS14810 PF00717 Peptidase S24-like A4U88_RS14815 PF02634 FdhD/NarQ family A4U88_RS14820 PF01062 A4U88_RS14820 A4U88_RS14825 PF04261 Dyp-type peroxidase family A4U88_RS14830 PF01614 Bacterial transcriptional regulator A4U88_RS14830 PF09339 IclR helix-turn-helix domain A4U88_RS14835 PF01144 Coenzyme A transferase A4U88_RS14840 PF01144 Coenzyme A transferase A4U88_RS14845 PF00108 Thiolase, N-terminal domain A4U88_RS14845 PF02803 Thiolase, C-terminal domain A4U88_RS14850 PF00561 alpha/beta hydrolase fold A4U88_RS14860 PF02426 Muconolactone delta-isomerase A4U88_RS14865 PF00775 Dioxygenase A4U88_RS14865 PF04444 Catechol dioxygenase N terminus A4U88_RS14870 PF00355 Rieske [2Fe-2S] domain A4U88_RS14870 PF00848 Ring hydroxylating alpha subunit (catalytic domain) A4U88_RS14875 PF00866 Ring hydroxylating beta subunit A4U88_RS14880 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS14880 PF00175 Oxidoreductase NAD-binding domain A4U88_RS14880 PF00970 Oxidoreductase FAD-binding domain A4U88_RS14885 PF00106 short chain dehydrogenase A4U88_RS14895 PF02040 A4U88_RS14895 A4U88_RS14900 PF01022 Bacterial regulatory protein, arsR family A4U88_RS14905 PF04107 Glutamate-cysteine ligase family 2(GCS2) A4U88_RS14920 PF11750 A4U88_RS14920 A4U88_RS14925 PF00122 E1-E2 ATPase A4U88_RS14925 PF00689 Cation transporting ATPase, C-terminus A4U88_RS14925 PF00690 Cation transporter/ATPase, N-terminus A4U88_RS14925 PF00702 haloacid dehalogenase-like hydrolase A4U88_RS14930 PF02308 A4U88_RS14930 A4U88_RS14935 PF02515 CoA-transferase family III A4U88_RS14940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS14940 PF03466 LysR substrate binding domain A4U88_RS14945 PF00282 Pyridoxal-dependent decarboxylase conserved domain A4U88_RS14950 PF13302 Acetyltransferase (GNAT) domain A4U88_RS14955 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS14960 PF10781 A4U88_RS14960 A4U88_RS14965 PF00589 Phage integrase family A4U88_RS14975 PF13560 Helix-turn-helix domain A4U88_RS15000 PF01258 Prokaryotic dksA/traR C4-type zinc finger A4U88_RS15005 PF02086 D12 class N6 adenine-specific DNA methyltransferase A4U88_RS15010 PF12961 Domain of Unknown Function with PDB structure (DUF3850) A4U88_RS15015 PF00145 C-5 cytosine-specific DNA methylase A4U88_RS15020 PF05840 A4U88_RS15020 A4U88_RS15035 PF01381 Helix-turn-helix A4U88_RS15040 PF00156 Phosphoribosyl transferase domain A4U88_RS15045 PF02481 DNA recombination-mediator protein A A4U88_RS15050 PF04860 Phage portal protein A4U88_RS15055 PF03237 Terminase-like family A4U88_RS15055 PF06056 Putative ATPase subunit of terminase (gpP-like) A4U88_RS15060 PF05929 A4U88_RS15060 A4U88_RS15065 PF05125 A4U88_RS15065 A4U88_RS15070 PF05944 A4U88_RS15070 A4U88_RS15075 PF05926 A4U88_RS15075 A4U88_RS15080 PF05489 Phage Tail Protein X A4U88_RS15085 PF04971 A4U88_RS15085 A4U88_RS15090 PF00959 Phage lysozyme A4U88_RS15095 PF03245 A4U88_RS15095 A4U88_RS15095 PF05781 A4U88_RS15095 A4U88_RS15100 PF06891 A4U88_RS15100 A4U88_RS15105 PF05069 A4U88_RS15105 A4U88_RS15110 PF04717 Phage-related baseplate assembly protein A4U88_RS15115 PF04965 Gene 25-like lysozyme A4U88_RS15120 PF04865 A4U88_RS15120 A4U88_RS15125 PF09684 A4U88_RS15125 A4U88_RS15140 PF12571 A4U88_RS15140 A4U88_RS15145 PF04984 Phage tail sheath protein A4U88_RS15150 PF04985 A4U88_RS15150 A4U88_RS15155 PF10109 A4U88_RS15155 A4U88_RS15160 PF06528 A4U88_RS15160 A4U88_RS15165 PF10145 A4U88_RS15165 A4U88_RS15170 PF06995 A4U88_RS15170 A4U88_RS15175 PF05954 Phage late control gene D protein (GPD) A4U88_RS15180 PF04606 A4U88_RS15180 A4U88_RS15185 PF00313 'Cold-shock' DNA-binding domain A4U88_RS15200 PF00107 Zinc-binding dehydrogenase A4U88_RS15200 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS15210 PF03466 LysR substrate binding domain A4U88_RS15215 PF06078 Bacterial protein of unknown function (DUF937) A4U88_RS15220 PF04226 A4U88_RS15220 A4U88_RS15230 PF03279 A4U88_RS15230 A4U88_RS15235 PF06983 3-demethylubiquinone-9 3-methyltransferase A4U88_RS15245 PF00990 GGDEF domain A4U88_RS15245 PF02743 Cache domain A4U88_RS15250 PF11004 A4U88_RS15250 A4U88_RS15255 PF00171 Aldehyde dehydrogenase family A4U88_RS15255 PF01575 MaoC like domain A4U88_RS15260 PF05138 Phenylacetic acid catabolic protein A4U88_RS15265 PF06243 Phenylacetic acid degradation B A4U88_RS15270 PF05138 Phenylacetic acid catabolic protein A4U88_RS15275 PF01883 Domain of unknown function DUF59 A4U88_RS15280 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS15280 PF00175 Oxidoreductase NAD-binding domain A4U88_RS15280 PF00970 Oxidoreductase FAD-binding domain A4U88_RS15285 PF00378 Enoyl-CoA hydratase/isomerase family A4U88_RS15290 PF00378 Enoyl-CoA hydratase/isomerase family A4U88_RS15295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U88_RS15295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U88_RS15300 PF03061 Thioesterase superfamily A4U88_RS15305 PF00108 Thiolase, N-terminal domain A4U88_RS15305 PF02803 Thiolase, C-terminal domain A4U88_RS15310 PF00501 AMP-binding enzyme A4U88_RS15310 PF14535 AMP-binding enzyme C-terminal domain A4U88_RS15315 PF07848 PaaX-like protein A4U88_RS15315 PF08223 PaaX-like protein C-terminal domain A4U88_RS15320 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS15325 PF00324 Amino acid permease A4U88_RS15330 PF00155 Aminotransferase class I and II A4U88_RS15335 PF01042 Endoribonuclease L-PSP A4U88_RS15340 PF07859 alpha/beta hydrolase fold A4U88_RS15345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS15345 PF03466 LysR substrate binding domain A4U88_RS15350 PF00043 Glutathione S-transferase, C-terminal domain A4U88_RS15350 PF13417 Glutathione S-transferase, N-terminal domain A4U88_RS15355 PF01243 Pyridoxamine 5'-phosphate oxidase A4U88_RS15360 PF08971 Glycogen synthesis protein A4U88_RS15370 PF00501 AMP-binding enzyme A4U88_RS15370 PF00550 Phosphopantetheine attachment site A4U88_RS15370 PF00668 Condensation domain A4U88_RS15370 PF00975 Thioesterase domain A4U88_RS15370 PF13193 AMP-binding enzyme C-terminal domain A4U88_RS15370 PF13745 HxxPF-repeated domain A4U88_RS15375 PF00593 TonB dependent receptor A4U88_RS15375 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS15380 PF01011 PQQ enzyme repeat A4U88_RS15395 PF01554 MatE A4U88_RS15400 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) A4U88_RS15415 PF13437 HlyD family secretion protein A4U88_RS15425 PF00419 Fimbrial protein A4U88_RS15430 PF00577 Outer membrane usher protein A4U88_RS15430 PF13953 PapC C-terminal domain A4U88_RS15430 PF13954 PapC N-terminal domain A4U88_RS15440 PF00419 Fimbrial protein A4U88_RS15445 PF10142 PhoPQ-activated pathogenicity-related protein A4U88_RS15460 PF08282 haloacid dehalogenase-like hydrolase A4U88_RS15475 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS15495 PF06744 A4U88_RS15495 A4U88_RS15495 PF06761 A4U88_RS15495 A4U88_RS15495 PF14331 A4U88_RS15495 A4U88_RS15500 PF00691 OmpA family A4U88_RS15500 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) A4U88_RS15505 PF05936 A4U88_RS15505 A4U88_RS15510 PF12790 Type VI secretion lipoprotein A4U88_RS15515 PF13665 A4U88_RS15515 A4U88_RS15520 PF12059 A4U88_RS15520 A4U88_RS15525 PF13599 Pentapeptide repeats (9 copies) A4U88_RS15530 PF09937 A4U88_RS15530 A4U88_RS15530 PF13599 Pentapeptide repeats (9 copies) A4U88_RS15535 PF05954 Phage late control gene D protein (GPD) A4U88_RS15540 PF00004 ATPase family associated with various cellular activities (AAA) A4U88_RS15540 PF02861 Clp amino terminal domain A4U88_RS15540 PF07724 AAA domain (Cdc48 subfamily) A4U88_RS15540 PF10431 C-terminal, D2-small domain, of ClpB protein A4U88_RS15550 PF05947 A4U88_RS15550 A4U88_RS15555 PF04965 Gene 25-like lysozyme A4U88_RS15560 PF05638 Protein of unknown function (DUF796) A4U88_RS15565 PF05943 A4U88_RS15565 A4U88_RS15570 PF05591 A4U88_RS15570 A4U88_RS15575 PF06812 A4U88_RS15575 A4U88_RS15580 PF07681 A4U88_RS15580 A4U88_RS15590 PF14090 A4U88_RS15590 A4U88_RS15595 PF12802 MarR family A4U88_RS15600 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A4U88_RS15610 PF06167 Glucose-regulated metallo-peptidase M90 A4U88_RS15620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4U88_RS15620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A4U88_RS15630 PF00106 short chain dehydrogenase A4U88_RS15635 PF00296 Luciferase-like monooxygenase A4U88_RS15640 PF03070 TENA/THI-4/PQQC family A4U88_RS15645 PF00005 ABC transporter A4U88_RS15650 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS15655 PF09084 NMT1/THI5 like A4U88_RS15660 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS15670 PF01048 Phosphorylase superfamily A4U88_RS15670 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus A4U88_RS15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS15675 PF03466 LysR substrate binding domain A4U88_RS15685 PF04657 A4U88_RS15685 A4U88_RS15690 PF13420 Acetyltransferase (GNAT) domain A4U88_RS15695 PF01381 Helix-turn-helix A4U88_RS15700 PF11115 A4U88_RS15700 A4U88_RS15710 PF00881 Nitroreductase family A4U88_RS15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS15715 PF03466 LysR substrate binding domain A4U88_RS15720 PF02525 Flavodoxin-like fold A4U88_RS15725 PF02770 Acyl-CoA dehydrogenase, middle domain A4U88_RS15725 PF08028 Acyl-CoA dehydrogenase, C-terminal domain A4U88_RS15730 PF00083 Sugar (and other) transporter A4U88_RS15735 PF03180 NLPA lipoprotein A4U88_RS15740 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS15745 PF00005 ABC transporter A4U88_RS15745 PF09383 NIL domain A4U88_RS15750 PF00296 Luciferase-like monooxygenase A4U88_RS15755 PF13454 FAD-NAD(P)-binding A4U88_RS15765 PF00158 Sigma-54 interaction domain A4U88_RS15765 PF02954 Bacterial regulatory protein, Fis family A4U88_RS15765 PF09084 NMT1/THI5 like A4U88_RS15770 PF12833 Helix-turn-helix domain A4U88_RS15775 PF12833 Helix-turn-helix domain A4U88_RS15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS15800 PF03466 LysR substrate binding domain A4U88_RS15805 PF13532 2OG-Fe(II) oxygenase superfamily A4U88_RS15810 PF00892 EamA-like transporter family A4U88_RS15815 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS15820 PF00425 chorismate binding enzyme A4U88_RS15825 PF01648 4'-phosphopantetheinyl transferase superfamily A4U88_RS15830 PF00328 Histidine phosphatase superfamily (branch 2) A4U88_RS15835 PF00939 Sodium:sulfate symporter transmembrane region A4U88_RS15840 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase A4U88_RS15845 PF03802 A4U88_RS15845 A4U88_RS15850 PF04223 Citrate lyase, alpha subunit (CitF) A4U88_RS15855 PF03328 HpcH/HpaI aldolase/citrate lyase family A4U88_RS15860 PF06857 A4U88_RS15860 A4U88_RS15865 PF08218 Citrate lyase ligase C-terminal domain A4U88_RS15870 PF00072 Response regulator receiver domain A4U88_RS15870 PF12431 A4U88_RS15870 A4U88_RS15885 PF02558 Ketopantoate reductase PanE/ApbA A4U88_RS15885 PF08546 Ketopantoate reductase PanE/ApbA C terminal A4U88_RS15900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS15900 PF03466 LysR substrate binding domain A4U88_RS15905 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS15905 PF03472 Autoinducer binding domain A4U88_RS15910 PF01965 DJ-1/PfpI family A4U88_RS15915 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS15920 PF00561 alpha/beta hydrolase fold A4U88_RS15925 PF00171 Aldehyde dehydrogenase family A4U88_RS15930 PF00141 Peroxidase A4U88_RS15940 PF13372 Alginate export A4U88_RS15945 PF00413 Matrixin A4U88_RS15945 PF08548 Peptidase M10 serralysin C terminal A4U88_RS15950 PF03060 Nitronate monooxygenase A4U88_RS15960 PF07681 A4U88_RS15960 A4U88_RS15965 PF12146 Putative lysophospholipase A4U88_RS15975 PF07690 Major Facilitator Superfamily A4U88_RS15980 PF05118 Aspartyl/Asparaginyl beta-hydroxylase A4U88_RS15985 PF05368 NmrA-like family A4U88_RS15990 PF01638 HxlR-like helix-turn-helix A4U88_RS15995 PF00005 ABC transporter A4U88_RS16000 PF00005 ABC transporter A4U88_RS16000 PF12399 Branched-chain amino acid ATP-binding cassette transporter A4U88_RS16005 PF02653 A4U88_RS16005 A4U88_RS16005 PF11862 A4U88_RS16005 A4U88_RS16010 PF02653 A4U88_RS16010 A4U88_RS16015 PF13458 Periplasmic binding protein A4U88_RS16025 PF14486 Domain of unknown function (DUF4432) A4U88_RS16030 PF13744 Helix-turn-helix domain A4U88_RS16035 PF05973 A4U88_RS16035 A4U88_RS16040 PF07690 Major Facilitator Superfamily A4U88_RS16045 PF13531 Bacterial extracellular solute-binding protein A4U88_RS16050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS16050 PF03466 LysR substrate binding domain A4U88_RS16055 PF01219 Prokaryotic diacylglycerol kinase A4U88_RS16065 PF00501 AMP-binding enzyme A4U88_RS16065 PF14535 AMP-binding enzyme C-terminal domain A4U88_RS16070 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS16075 PF00550 Phosphopantetheine attachment site A4U88_RS16080 PF00155 Aminotransferase class I and II A4U88_RS16100 PF13440 A4U88_RS16100 A4U88_RS16110 PF09695 A4U88_RS16110 A4U88_RS16115 PF03739 A4U88_RS16115 A4U88_RS16120 PF03739 A4U88_RS16120 A4U88_RS16125 PF00535 Glycosyl transferase family 2 A4U88_RS16145 PF10592 A4U88_RS16145 A4U88_RS16155 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS16155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A4U88_RS16160 PF00596 Class II Aldolase and Adducin N-terminal domain A4U88_RS16170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A4U88_RS16170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A4U88_RS16175 PF02653 A4U88_RS16175 A4U88_RS16180 PF00005 ABC transporter A4U88_RS16185 PF13407 Periplasmic binding protein domain A4U88_RS16190 PF00107 Zinc-binding dehydrogenase A4U88_RS16190 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS16195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS16195 PF03466 LysR substrate binding domain A4U88_RS16200 PF01546 Peptidase family M20/M25/M40 A4U88_RS16200 PF07687 Peptidase dimerisation domain A4U88_RS16205 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS16210 PF04363 A4U88_RS16210 A4U88_RS16215 PF13515 A4U88_RS16215 A4U88_RS16220 PF01510 N-acetylmuramoyl-L-alanine amidase A4U88_RS16225 PF00717 Peptidase S24-like A4U88_RS16230 PF07993 Male sterility protein A4U88_RS16240 PF06440 DNA polymerase III, theta subunit A4U88_RS16245 PF00929 Exonuclease A4U88_RS16245 PF08411 Exonuclease C-terminal A4U88_RS16250 PF00324 Amino acid permease A4U88_RS16260 PF00120 Glutamine synthetase, catalytic domain A4U88_RS16265 PF01381 Helix-turn-helix A4U88_RS16265 PF07883 Cupin domain A4U88_RS16270 PF00005 ABC transporter A4U88_RS16275 PF02653 A4U88_RS16275 A4U88_RS16280 PF00593 TonB dependent receptor A4U88_RS16280 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS16285 PF01497 Periplasmic binding protein A4U88_RS16290 PF00005 ABC transporter A4U88_RS16295 PF01032 FecCD transport family A4U88_RS16300 PF00990 GGDEF domain A4U88_RS16305 PF00324 Amino acid permease A4U88_RS16320 PF03601 A4U88_RS16320 A4U88_RS16325 PF01261 Xylose isomerase-like TIM barrel A4U88_RS16330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A4U88_RS16330 PF02378 Phosphotransferase system, EIIC A4U88_RS16335 PF00294 pfkB family carbohydrate kinase A4U88_RS16340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A4U88_RS16340 PF00381 PTS HPr component phosphorylation site A4U88_RS16350 PF00293 NUDIX domain A4U88_RS16355 PF03264 NapC/NirT cytochrome c family, N-terminal region A4U88_RS16370 PF03222 Tryptophan/tyrosine permease family A4U88_RS16375 PF01132 Elongation factor P (EF-P) OB domain A4U88_RS16375 PF08207 Elongation factor P (EF-P) KOW-like domain A4U88_RS16375 PF09285 Elongation factor P, C-terminal A4U88_RS16385 PF01232 Mannitol dehydrogenase Rossmann domain A4U88_RS16385 PF08125 Mannitol dehydrogenase C-terminal domain A4U88_RS16395 PF02492 CobW/HypB/UreG, nucleotide-binding domain A4U88_RS16395 PF07683 Cobalamin synthesis protein cobW C-terminal domain A4U88_RS16400 PF01569 PAP2 superfamily A4U88_RS16410 PF00877 NlpC/P60 family A4U88_RS16415 PF00563 EAL domain A4U88_RS16415 PF12792 A4U88_RS16415 A4U88_RS16420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS16425 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS16430 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS16430 PF12911 A4U88_RS16430 A4U88_RS16435 PF00005 ABC transporter A4U88_RS16435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U88_RS16440 PF13989 A4U88_RS16440 A4U88_RS16445 PF07690 Major Facilitator Superfamily A4U88_RS16450 PF00849 RNA pseudouridylate synthase A4U88_RS16450 PF01479 S4 domain A4U88_RS16455 PF00271 Helicase conserved C-terminal domain A4U88_RS16455 PF04851 Type III restriction enzyme, res subunit A4U88_RS16460 PF01386 Ribosomal L25p family A4U88_RS16465 PF04245 A4U88_RS16465 A4U88_RS16470 PF07208 Protein of unknown function (DUF1414) A4U88_RS16475 PF00884 Sulfatase A4U88_RS16475 PF11893 A4U88_RS16475 A4U88_RS16490 PF00384 Molybdopterin oxidoreductase A4U88_RS16490 PF01568 Molydopterin dinucleotide binding domain A4U88_RS16490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A4U88_RS16495 PF03916 A4U88_RS16495 A4U88_RS16500 PF13247 4Fe-4S dicluster domain A4U88_RS16505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS16505 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein A4U88_RS16510 PF00072 Response regulator receiver domain A4U88_RS16510 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS16515 PF06183 DinI-like family A4U88_RS16520 PF08400 A4U88_RS16520 A4U88_RS16525 PF13884 Chaperone of endosialidase A4U88_RS16530 PF09327 A4U88_RS16530 A4U88_RS16530 PF12421 A4U88_RS16530 A4U88_RS16530 PF13550 A4U88_RS16530 A4U88_RS16540 PF00877 NlpC/P60 family A4U88_RS16540 PF14464 Prokaryotic homologs of the JAB domain A4U88_RS16545 PF05100 A4U88_RS16545 A4U88_RS16550 PF05939 A4U88_RS16550 A4U88_RS16565 PF16462 A4U88_RS16565 A4U88_RS16570 PF16463 A4U88_RS16570 A4U88_RS16585 PF00959 Phage lysozyme A4U88_RS16590 PF16083 A4U88_RS16590 A4U88_RS16595 PF06530 A4U88_RS16595 A4U88_RS16615 PF04355 SmpA / OmlA family A4U88_RS16620 PF00753 Metallo-beta-lactamase superfamily A4U88_RS16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS16625 PF03466 LysR substrate binding domain A4U88_RS16630 PF07080 Protein of unknown function (DUF1348) A4U88_RS16635 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS16640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS16645 PF00267 Gram-negative porin A4U88_RS16650 PF13811 A4U88_RS16650 A4U88_RS16655 PF07690 Major Facilitator Superfamily A4U88_RS16660 PF01627 Hpt domain A4U88_RS16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS16660 PF16359 A4U88_RS16660 A4U88_RS16665 PF00072 Response regulator receiver domain A4U88_RS16665 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS16670 PF00072 Response regulator receiver domain A4U88_RS16670 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS16670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS16670 PF09456 RcsC Alpha-Beta-Loop (ABL) A4U88_RS16675 PF00521 DNA gyrase/topoisomerase IV, subunit A A4U88_RS16675 PF03989 DNA gyrase C-terminal domain, beta-propeller A4U88_RS16680 PF13489 Methyltransferase domain A4U88_RS16685 PF00317 Ribonucleotide reductase, all-alpha domain A4U88_RS16685 PF02867 Ribonucleotide reductase, barrel domain A4U88_RS16685 PF03477 ATP cone domain A4U88_RS16690 PF00268 Ribonucleotide reductase, small chain A4U88_RS16695 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS16700 PF01848 A4U88_RS16700 A4U88_RS16705 PF12833 Helix-turn-helix domain A4U88_RS16710 PF01494 FAD binding domain A4U88_RS16715 PF00994 Probable molybdopterin binding domain A4U88_RS16720 PF03222 Tryptophan/tyrosine permease family A4U88_RS16725 PF07437 A4U88_RS16725 A4U88_RS16730 PF00199 Catalase A4U88_RS16730 PF06628 Catalase-related immune-responsive A4U88_RS16735 PF00501 AMP-binding enzyme A4U88_RS16740 PF13378 Enolase C-terminal domain-like A4U88_RS16750 PF12697 Alpha/beta hydrolase family A4U88_RS16755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U88_RS16755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U88_RS16755 PF16582 A4U88_RS16755 A4U88_RS16760 PF05957 A4U88_RS16760 A4U88_RS16765 PF00107 Zinc-binding dehydrogenase A4U88_RS16765 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS16770 PF00106 short chain dehydrogenase A4U88_RS16775 PF06496 A4U88_RS16775 A4U88_RS16780 PF07690 Major Facilitator Superfamily A4U88_RS16790 PF00892 EamA-like transporter family A4U88_RS16810 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains A4U88_RS16815 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains A4U88_RS16820 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains A4U88_RS16820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A4U88_RS16825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A4U88_RS16830 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 A4U88_RS16835 PF12838 4Fe-4S dicluster domain A4U88_RS16840 PF00146 NADH dehydrogenase A4U88_RS16845 PF00384 Molybdopterin oxidoreductase A4U88_RS16845 PF01568 Molydopterin dinucleotide binding domain A4U88_RS16845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A4U88_RS16845 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A4U88_RS16845 PF13510 2Fe-2S iron-sulfur cluster binding domain A4U88_RS16850 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A4U88_RS16850 PF10531 SLBB domain A4U88_RS16850 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A4U88_RS16855 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin A4U88_RS16860 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A4U88_RS16860 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A4U88_RS16865 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A4U88_RS16870 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A4U88_RS16875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS16875 PF03466 LysR substrate binding domain A4U88_RS16880 PF00155 Aminotransferase class I and II A4U88_RS16885 PF13023 HD domain A4U88_RS16890 PF02080 TrkA-C domain A4U88_RS16890 PF03600 Citrate transporter A4U88_RS16895 PF13419 Haloacid dehalogenase-like hydrolase A4U88_RS16900 PF03887 YfbU domain A4U88_RS16905 PF04217 A4U88_RS16905 A4U88_RS16915 PF01515 Phosphate acetyl/butaryl transferase A4U88_RS16915 PF07085 DRTGG domain A4U88_RS16915 PF13500 AAA domain A4U88_RS16920 PF02779 Transketolase, pyrimidine binding domain A4U88_RS16920 PF02780 Transketolase, C-terminal domain A4U88_RS16925 PF00456 Transketolase, thiamine diphosphate binding domain A4U88_RS16935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A4U88_RS16940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A4U88_RS16945 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS16945 PF13377 Periplasmic binding protein-like domain A4U88_RS16950 PF00293 NUDIX domain A4U88_RS16955 PF12850 Calcineurin-like phosphoesterase superfamily domain A4U88_RS16960 PF00043 Glutathione S-transferase, C-terminal domain A4U88_RS16960 PF02798 Glutathione S-transferase, N-terminal domain A4U88_RS16965 PF02152 Dihydroneopterin aldolase A4U88_RS16970 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS16970 PF08338 Domain of unknown function (DUF1731) A4U88_RS16975 PF00005 ABC transporter A4U88_RS16980 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS16985 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS16990 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS16995 PF02441 Flavoprotein A4U88_RS17000 PF00156 Phosphoribosyl transferase domain A4U88_RS17000 PF13522 Glutamine amidotransferase domain A4U88_RS17005 PF02674 A4U88_RS17005 A4U88_RS17010 PF05036 Sporulation related domain A4U88_RS17015 PF08245 Mur ligase middle domain A4U88_RS17020 PF01039 Carboxyl transferase domain A4U88_RS17025 PF09335 A4U88_RS17025 A4U88_RS17030 PF01416 tRNA pseudouridine synthase A4U88_RS17035 PF01118 Semialdehyde dehydrogenase, NAD binding domain A4U88_RS17035 PF02774 Semialdehyde dehydrogenase, dimerisation domain A4U88_RS17040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4U88_RS17040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4U88_RS17040 PF11890 Domain of unknown function (DUF3410) A4U88_RS17045 PF02311 AraC-like ligand binding domain A4U88_RS17045 PF12833 Helix-turn-helix domain A4U88_RS17050 PF00892 EamA-like transporter family A4U88_RS17055 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS17055 PF00672 HAMP domain A4U88_RS17055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS17055 PF08521 A4U88_RS17055 A4U88_RS17060 PF00072 Response regulator receiver domain A4U88_RS17060 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS17070 PF03401 Tripartite tricarboxylate transporter family receptor A4U88_RS17075 PF07331 A4U88_RS17075 A4U88_RS17080 PF01970 A4U88_RS17080 A4U88_RS17085 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS17090 PF00892 EamA-like transporter family A4U88_RS17095 PF00155 Aminotransferase class I and II A4U88_RS17095 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS17100 PF08534 Redoxin A4U88_RS17105 PF13462 Thioredoxin A4U88_RS17110 PF02683 A4U88_RS17110 A4U88_RS17110 PF11412 Disulphide bond corrector protein DsbC A4U88_RS17110 PF13899 Thioredoxin-like A4U88_RS17125 PF00581 Rhodanese-like domain A4U88_RS17130 PF00155 Aminotransferase class I and II A4U88_RS17130 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS17135 PF03372 Endonuclease/Exonuclease/phosphatase family A4U88_RS17140 PF01546 Peptidase family M20/M25/M40 A4U88_RS17140 PF07687 Peptidase dimerisation domain A4U88_RS17145 PF03600 Citrate transporter A4U88_RS17150 PF02424 ApbE family A4U88_RS17160 PF00109 Beta-ketoacyl synthase, N-terminal domain A4U88_RS17160 PF02801 Beta-ketoacyl synthase, C-terminal domain A4U88_RS17165 PF01266 FAD dependent oxidoreductase A4U88_RS17165 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A4U88_RS17170 PF08891 A4U88_RS17170 A4U88_RS17175 PF04315 A4U88_RS17175 A4U88_RS17180 PF01925 A4U88_RS17180 A4U88_RS17185 PF03411 Penicillin-insensitive murein endopeptidase A4U88_RS17190 PF01264 Chorismate synthase A4U88_RS17195 PF05175 Methyltransferase small domain A4U88_RS17200 PF01713 Smr domain A4U88_RS17205 PF00300 Histidine phosphatase superfamily (branch 1) A4U88_RS17210 PF00378 Enoyl-CoA hydratase/isomerase family A4U88_RS17210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U88_RS17210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U88_RS17215 PF00108 Thiolase, N-terminal domain A4U88_RS17215 PF02803 Thiolase, C-terminal domain A4U88_RS17220 PF04175 Protein of unknown function (DUF406) A4U88_RS17225 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A4U88_RS17230 PF04333 A4U88_RS17230 A4U88_RS17235 PF14559 Tetratricopeptide repeat A4U88_RS17240 PF03918 Cytochrome C biogenesis protein A4U88_RS17245 PF08534 Redoxin A4U88_RS17250 PF01578 A4U88_RS17250 A4U88_RS17250 PF16327 A4U88_RS17250 A4U88_RS17255 PF03100 CcmE A4U88_RS17260 PF04995 A4U88_RS17260 A4U88_RS17265 PF01578 A4U88_RS17265 A4U88_RS17270 PF03379 A4U88_RS17270 A4U88_RS17275 PF00005 ABC transporter A4U88_RS17280 PF01226 Formate/nitrite transporter A4U88_RS17290 PF10282 Lactonase, 7-bladed beta-propeller A4U88_RS17310 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS17310 PF08448 PAS fold A4U88_RS17310 PF13426 PAS domain A4U88_RS17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS17320 PF03466 LysR substrate binding domain A4U88_RS17330 PF00892 EamA-like transporter family A4U88_RS17350 PF05656 A4U88_RS17350 A4U88_RS17355 PF13994 A4U88_RS17355 A4U88_RS17360 PF00535 Glycosyl transferase family 2 A4U88_RS17365 PF01522 Polysaccharide deacetylase A4U88_RS17365 PF14883 Hypothetical glycosyl hydrolase family 13 A4U88_RS17375 PF15970 A4U88_RS17375 A4U88_RS17380 PF01292 Prokaryotic cytochrome b561 A4U88_RS17390 PF13302 Acetyltransferase (GNAT) domain A4U88_RS17395 PF07350 Protein of unknown function (DUF1479) A4U88_RS17405 PF00072 Response regulator receiver domain A4U88_RS17405 PF04397 LytTr DNA-binding domain A4U88_RS17410 PF10697 A4U88_RS17410 A4U88_RS17415 PF07690 Major Facilitator Superfamily A4U88_RS17420 PF02685 Glucokinase A4U88_RS17425 PF00654 Voltage gated chloride channel A4U88_RS17430 PF01177 Asp/Glu/Hydantoin racemase A4U88_RS17435 PF05232 A4U88_RS17435 A4U88_RS17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS17440 PF03466 LysR substrate binding domain A4U88_RS17445 PF00205 Thiamine pyrophosphate enzyme, central domain A4U88_RS17445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U88_RS17445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U88_RS17450 PF00248 Aldo/keto reductase family A4U88_RS17455 PF10697 A4U88_RS17455 A4U88_RS17460 PF01566 A4U88_RS17460 A4U88_RS17465 PF01773 Na+ dependent nucleoside transporter N-terminus A4U88_RS17465 PF07662 Na+ dependent nucleoside transporter C-terminus A4U88_RS17465 PF07670 Nucleoside recognition A4U88_RS17480 PF01226 Formate/nitrite transporter A4U88_RS17485 PF00749 tRNA synthetases class I (E and Q), catalytic domain A4U88_RS17515 PF01497 Periplasmic binding protein A4U88_RS17520 PF01032 FecCD transport family A4U88_RS17525 PF01032 FecCD transport family A4U88_RS17530 PF00005 ABC transporter A4U88_RS17535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U88_RS17540 PF00205 Thiamine pyrophosphate enzyme, central domain A4U88_RS17540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U88_RS17540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U88_RS17545 PF03306 Alpha-acetolactate decarboxylase A4U88_RS17550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS17550 PF03466 LysR substrate binding domain A4U88_RS17555 PF05985 Ethanolamine ammonia-lyase light chain (EutC) A4U88_RS17560 PF06751 Ethanolamine ammonia lyase large subunit (EutB) A4U88_RS17565 PF06042 Bacterial protein of unknown function (DUF925) A4U88_RS17570 PF14282 A4U88_RS17570 A4U88_RS17575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS17575 PF03466 LysR substrate binding domain A4U88_RS17580 PF13593 SBF-like CPA transporter family (DUF4137) A4U88_RS17585 PF12843 A4U88_RS17585 A4U88_RS17590 PF00533 BRCA1 C Terminus (BRCT) domain A4U88_RS17590 PF01653 NAD-dependent DNA ligase adenylation domain A4U88_RS17590 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A4U88_RS17590 PF03120 NAD-dependent DNA ligase OB-fold domain A4U88_RS17590 PF12826 Helix-hairpin-helix motif A4U88_RS17590 PF14520 Helix-hairpin-helix domain A4U88_RS17600 PF07264 Etoposide-induced protein 2 A4U88_RS17605 PF00291 Pyridoxal-phosphate dependent enzyme A4U88_RS17610 PF00381 PTS HPr component phosphorylation site A4U88_RS17615 PF00391 PEP-utilising enzyme, mobile domain A4U88_RS17615 PF02896 PEP-utilising enzyme, TIM barrel domain A4U88_RS17615 PF05524 PEP-utilising enzyme, N-terminal A4U88_RS17620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A4U88_RS17625 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS17625 PF00672 HAMP domain A4U88_RS17625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS17630 PF00072 Response regulator receiver domain A4U88_RS17630 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS17635 PF00291 Pyridoxal-phosphate dependent enzyme A4U88_RS17640 PF00005 ABC transporter A4U88_RS17645 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS17650 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS17655 PF13531 Bacterial extracellular solute-binding protein A4U88_RS17660 PF04261 Dyp-type peroxidase family A4U88_RS17665 PF06572 Protein of unknown function (DUF1131) A4U88_RS17670 PF11143 A4U88_RS17670 A4U88_RS17675 PF04076 Bacterial OB fold (BOF) protein A4U88_RS17680 PF00583 Acetyltransferase (GNAT) family A4U88_RS17685 PF01520 N-acetylmuramoyl-L-alanine amidase A4U88_RS17690 PF01218 Coproporphyrinogen III oxidase A4U88_RS17695 PF02639 A4U88_RS17695 A4U88_RS17705 PF00326 Prolyl oligopeptidase family A4U88_RS17705 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A4U88_RS17710 PF03544 Gram-negative bacterial TonB protein C-terminal A4U88_RS17715 PF04187 Protein of unknown function, DUF399 A4U88_RS17720 PF00324 Amino acid permease A4U88_RS17725 PF02574 Homocysteine S-methyltransferase A4U88_RS17730 PF00390 Malic enzyme, N-terminal domain A4U88_RS17730 PF01515 Phosphate acetyl/butaryl transferase A4U88_RS17730 PF03949 Malic enzyme, NAD binding domain A4U88_RS17735 PF10828 A4U88_RS17735 A4U88_RS17740 PF13539 D-alanyl-D-alanine carboxypeptidase A4U88_RS17745 PF05106 A4U88_RS17745 A4U88_RS17750 PF00704 Glycosyl hydrolases family 18 A4U88_RS17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS17755 PF03466 LysR substrate binding domain A4U88_RS17760 PF03067 Chitin binding domain A4U88_RS17765 PF04198 Putative sugar-binding domain A4U88_RS17765 PF13412 Winged helix-turn-helix DNA-binding A4U88_RS17770 PF02734 DAK2 domain A4U88_RS17775 PF02733 Dak1 domain A4U88_RS17780 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS17785 PF07690 Major Facilitator Superfamily A4U88_RS17790 PF00107 Zinc-binding dehydrogenase A4U88_RS17790 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS17795 PF02502 Ribose/Galactose Isomerase A4U88_RS17800 PF00923 Transaldolase A4U88_RS17805 PF00456 Transketolase, thiamine diphosphate binding domain A4U88_RS17805 PF02779 Transketolase, pyrimidine binding domain A4U88_RS17805 PF02780 Transketolase, C-terminal domain A4U88_RS17810 PF00293 NUDIX domain A4U88_RS17815 PF00672 HAMP domain A4U88_RS17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS17815 PF07730 Histidine kinase A4U88_RS17815 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term A4U88_RS17820 PF00072 Response regulator receiver domain A4U88_RS17820 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS17825 PF09904 Winged helix-turn helix A4U88_RS17830 PF00873 AcrB/AcrD/AcrF family A4U88_RS17835 PF12688 Tetratrico peptide repeat A4U88_RS17840 PF13673 Acetyltransferase (GNAT) domain A4U88_RS17845 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS17850 PF03960 ArsC family A4U88_RS17855 PF01546 Peptidase family M20/M25/M40 A4U88_RS17855 PF07687 Peptidase dimerisation domain A4U88_RS17860 PF02557 D-alanyl-D-alanine carboxypeptidase A4U88_RS17865 PF13980 A4U88_RS17865 A4U88_RS17870 PF02230 Phospholipase/Carboxylesterase A4U88_RS17875 PF05127 Helicase A4U88_RS17875 PF08351 Domain of unknown function (DUF1726) A4U88_RS17875 PF13718 GNAT acetyltransferase 2 A4U88_RS17875 PF17176 A4U88_RS17875 A4U88_RS17880 PF04228 A4U88_RS17880 A4U88_RS17885 PF01259 SAICAR synthetase A4U88_RS17890 PF06804 NlpB/DapX lipoprotein A4U88_RS17895 PF00701 Dihydrodipicolinate synthetase family A4U88_RS17900 PF13740 ACT domain A4U88_RS17905 PF00578 AhpC/TSA family A4U88_RS17910 PF01594 A4U88_RS17910 A4U88_RS17925 PF07883 Cupin domain A4U88_RS17930 PF13673 Acetyltransferase (GNAT) domain A4U88_RS17935 PF01810 A4U88_RS17935 A4U88_RS17940 PF01037 AsnC family A4U88_RS17940 PF13412 Winged helix-turn-helix DNA-binding A4U88_RS17945 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U88_RS17950 PF02082 Transcriptional regulator A4U88_RS17955 PF01435 Peptidase family M48 A4U88_RS17955 PF14559 Tetratricopeptide repeat A4U88_RS17960 PF03960 ArsC family A4U88_RS17965 PF00308 Bacterial dnaA protein A4U88_RS17975 PF04226 A4U88_RS17975 A4U88_RS17980 PF00860 Permease family A4U88_RS17985 PF14681 Uracil phosphoribosyltransferase A4U88_RS17990 PF00586 AIR synthase related protein, N-terminal domain A4U88_RS17990 PF02769 AIR synthase related protein, C-terminal domain A4U88_RS17995 PF00551 Formyl transferase A4U88_RS18000 PF13302 Acetyltransferase (GNAT) domain A4U88_RS18015 PF00005 ABC transporter A4U88_RS18020 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS18025 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS18030 PF02503 Polyphosphate kinase middle domain A4U88_RS18030 PF13089 Polyphosphate kinase N-terminal domain A4U88_RS18030 PF13090 Polyphosphate kinase C-terminal domain A4U88_RS18035 PF02541 Ppx/GppA phosphatase family A4U88_RS18040 PF11119 A4U88_RS18040 A4U88_RS18045 PF00571 CBS domain A4U88_RS18045 PF01769 Divalent cation transporter A4U88_RS18045 PF03448 MgtE intracellular N domain A4U88_RS18050 PF00563 EAL domain A4U88_RS18050 PF00990 GGDEF domain A4U88_RS18050 PF05231 A4U88_RS18050 A4U88_RS18050 PF08447 PAS fold A4U88_RS18050 PF08448 PAS fold A4U88_RS18055 PF02316 Mu DNA-binding domain A4U88_RS18065 PF00012 Hsp70 protein A4U88_RS18070 PF13302 Acetyltransferase (GNAT) domain A4U88_RS18075 PF01243 Pyridoxamine 5'-phosphate oxidase A4U88_RS18080 PF00248 Aldo/keto reductase family A4U88_RS18085 PF13437 HlyD family secretion protein A4U88_RS18085 PF13533 Biotin-lipoyl like A4U88_RS18090 PF00873 AcrB/AcrD/AcrF family A4U88_RS18095 PF00873 AcrB/AcrD/AcrF family A4U88_RS18110 PF00072 Response regulator receiver domain A4U88_RS18110 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS18115 PF01850 PIN domain A4U88_RS18120 PF04014 Antidote-toxin recognition MazE A4U88_RS18125 PF07411 Domain of unknown function (DUF1508) A4U88_RS18130 PF01136 A4U88_RS18130 A4U88_RS18130 PF16325 A4U88_RS18130 A4U88_RS18135 PF00781 Diacylglycerol kinase catalytic domain A4U88_RS18140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A4U88_RS18140 PF13378 Enolase C-terminal domain-like A4U88_RS18145 PF00107 Zinc-binding dehydrogenase A4U88_RS18145 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS18150 PF07690 Major Facilitator Superfamily A4U88_RS18155 PF01232 Mannitol dehydrogenase Rossmann domain A4U88_RS18155 PF08125 Mannitol dehydrogenase C-terminal domain A4U88_RS18160 PF00083 Sugar (and other) transporter A4U88_RS18160 PF07690 Major Facilitator Superfamily A4U88_RS18170 PF01791 DeoC/LacD family aldolase A4U88_RS18175 PF03608 A4U88_RS18175 A4U88_RS18180 PF03612 A4U88_RS18180 A4U88_RS18180 PF07663 A4U88_RS18180 A4U88_RS18185 PF03829 PTS system glucitol/sorbitol-specific IIA component A4U88_RS18190 PF00106 short chain dehydrogenase A4U88_RS18195 PF06923 A4U88_RS18195 A4U88_RS18200 PF00455 A4U88_RS18200 A4U88_RS18200 PF08220 DeoR-like helix-turn-helix domain A4U88_RS18205 PF00571 CBS domain A4U88_RS18205 PF01380 SIS domain A4U88_RS18210 PF08816 Inhibitor of vertebrate lysozyme (Ivy) A4U88_RS18215 PF08543 Phosphomethylpyrimidine kinase A4U88_RS18220 PF02110 Hydroxyethylthiazole kinase family A4U88_RS18225 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS18230 PF17090 A4U88_RS18230 A4U88_RS18235 PF13437 HlyD family secretion protein A4U88_RS18235 PF13533 Biotin-lipoyl like A4U88_RS18240 PF04632 A4U88_RS18240 A4U88_RS18245 PF13508 Acetyltransferase (GNAT) domain A4U88_RS18250 PF07690 Major Facilitator Superfamily A4U88_RS18260 PF06643 A4U88_RS18260 A4U88_RS18265 PF10908 A4U88_RS18265 A4U88_RS18270 PF00849 RNA pseudouridylate synthase A4U88_RS18270 PF01479 S4 domain A4U88_RS18285 PF00072 Response regulator receiver domain A4U88_RS18285 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS18290 PF00072 Response regulator receiver domain A4U88_RS18290 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS18295 PF00378 Enoyl-CoA hydratase/isomerase family A4U88_RS18300 PF01638 HxlR-like helix-turn-helix A4U88_RS18315 PF00117 Glutamine amidotransferase class-I A4U88_RS18315 PF00958 GMP synthase C terminal domain A4U88_RS18315 PF02540 NAD synthase A4U88_RS18320 PF00478 IMP dehydrogenase / GMP reductase domain A4U88_RS18320 PF00571 CBS domain A4U88_RS18325 PF02601 A4U88_RS18325 A4U88_RS18325 PF13742 A4U88_RS18325 A4U88_RS18330 PF01055 Glycosyl hydrolases family 31 A4U88_RS18330 PF13802 Galactose mutarotase-like A4U88_RS18330 PF17137 A4U88_RS18330 A4U88_RS18340 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS18340 PF13377 Periplasmic binding protein-like domain A4U88_RS18345 PF01447 Thermolysin metallopeptidase, catalytic domain A4U88_RS18345 PF02868 Thermolysin metallopeptidase, alpha-helical domain A4U88_RS18345 PF16485 A4U88_RS18345 A4U88_RS18355 PF07191 zinc-ribbons A4U88_RS18360 PF03547 A4U88_RS18360 A4U88_RS18365 PF01926 50S ribosome-binding GTPase A4U88_RS18365 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A4U88_RS18370 PF13360 PQQ-like domain A4U88_RS18375 PF09976 Tetratricopeptide repeat A4U88_RS18380 PF03129 Anticodon binding domain A4U88_RS18380 PF13393 Histidyl-tRNA synthetase A4U88_RS18385 PF04551 GcpE protein A4U88_RS18390 PF13413 Helix-turn-helix domain A4U88_RS18390 PF13464 A4U88_RS18390 A4U88_RS18395 PF13181 Tetratricopeptide repeat A4U88_RS18395 PF13432 Tetratricopeptide repeat A4U88_RS18400 PF04055 Radical SAM superfamily A4U88_RS18405 PF00334 Nucleoside diphosphate kinase A4U88_RS18410 PF07179 A4U88_RS18410 A4U88_RS18410 PF14581 A4U88_RS18410 A4U88_RS18415 PF00883 Cytosol aminopeptidase family, catalytic domain A4U88_RS18415 PF12404 A4U88_RS18415 A4U88_RS18420 PF04384 Iron-sulphur cluster assembly A4U88_RS18425 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U88_RS18430 PF00012 Hsp70 protein A4U88_RS18435 PF07743 HSCB C-terminal oligomerisation domain A4U88_RS18440 PF01521 Iron-sulphur cluster biosynthesis A4U88_RS18445 PF01592 NifU-like N terminal domain A4U88_RS18450 PF00266 Aminotransferase class-V A4U88_RS18455 PF02082 Transcriptional regulator A4U88_RS18460 PF00588 SpoU rRNA Methylase family A4U88_RS18465 PF00459 Inositol monophosphatase family A4U88_RS18470 PF03824 A4U88_RS18470 A4U88_RS18475 PF06226 A4U88_RS18475 A4U88_RS18485 PF12832 MFS_1 like family A4U88_RS18490 PF00464 Serine hydroxymethyltransferase A4U88_RS18495 PF00042 Globin A4U88_RS18495 PF00175 Oxidoreductase NAD-binding domain A4U88_RS18495 PF00970 Oxidoreductase FAD-binding domain A4U88_RS18500 PF00034 Cytochrome c A4U88_RS18500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A4U88_RS18505 PF13450 NAD(P)-binding Rossmann-like domain A4U88_RS18510 PF00171 Aldehyde dehydrogenase family A4U88_RS18515 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS18520 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS18525 PF00005 ABC transporter A4U88_RS18525 PF08402 TOBE domain A4U88_RS18530 PF13416 Bacterial extracellular solute-binding protein A4U88_RS18540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS18540 PF03466 LysR substrate binding domain A4U88_RS18545 PF00543 Nitrogen regulatory protein P-II A4U88_RS18550 PF00795 Carbon-nitrogen hydrolase A4U88_RS18550 PF02540 NAD synthase A4U88_RS18560 PF13942 A4U88_RS18560 A4U88_RS18565 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS18565 PF00672 HAMP domain A4U88_RS18565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS18570 PF02769 AIR synthase related protein, C-terminal domain A4U88_RS18570 PF13507 CobB/CobQ-like glutamine amidotransferase domain A4U88_RS18575 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS18575 PF01464 Transglycosylase SLT domain A4U88_RS18580 PF14437 A4U88_RS18580 A4U88_RS18590 PF12710 haloacid dehalogenase-like hydrolase A4U88_RS18600 PF13580 SIS domain A4U88_RS18605 PF01380 SIS domain A4U88_RS18605 PF01418 Helix-turn-helix domain, rpiR family A4U88_RS18610 PF12838 4Fe-4S dicluster domain A4U88_RS18615 PF01648 4'-phosphopantetheinyl transferase superfamily A4U88_RS18620 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A4U88_RS18625 PF02565 Recombination protein O C terminal A4U88_RS18625 PF11967 Recombination protein O N terminal A4U88_RS18630 PF01926 50S ribosome-binding GTPase A4U88_RS18630 PF07650 KH domain A4U88_RS18635 PF00035 Double-stranded RNA binding motif A4U88_RS18635 PF14622 Ribonuclease-III-like A4U88_RS18640 PF00717 Peptidase S24-like A4U88_RS18640 PF10502 Signal peptidase, peptidase S26 A4U88_RS18645 PF00009 Elongation factor Tu GTP binding domain A4U88_RS18645 PF00679 Elongation factor G C-terminus A4U88_RS18645 PF03144 Elongation factor Tu domain 2 A4U88_RS18645 PF06421 GTP-binding protein LepA C-terminus A4U88_RS18655 PF04246 A4U88_RS18655 A4U88_RS18660 PF03888 MucB/RseB family A4U88_RS18660 PF17188 A4U88_RS18660 A4U88_RS18665 PF03872 Anti sigma-E protein RseA, N-terminal domain A4U88_RS18665 PF03873 Anti sigma-E protein RseA, C-terminal domain A4U88_RS18670 PF04542 Sigma-70 region 2 A4U88_RS18670 PF08281 Sigma-70, region 4 A4U88_RS18675 PF00890 FAD binding domain A4U88_RS18675 PF02910 Fumarate reductase flavoprotein C-term A4U88_RS18680 PF05175 Methyltransferase small domain A4U88_RS18690 PF00023 Ankyrin repeat A4U88_RS18690 PF12796 Ankyrin repeats (3 copies) A4U88_RS18695 PF11187 Protein of unknown function (DUF2974) A4U88_RS18700 PF01228 Glycine radical A4U88_RS18705 PF03167 Uracil DNA glycosylase superfamily A4U88_RS18710 PF01025 GrpE A4U88_RS18715 PF01513 ATP-NAD kinase A4U88_RS18720 PF02463 RecF/RecN/SMC N terminal domain A4U88_RS18725 PF04355 SmpA / OmlA family A4U88_RS18730 PF03658 RnfH family Ubiquitin A4U88_RS18735 PF03364 Polyketide cyclase / dehydrase and lipid transport A4U88_RS18740 PF01668 SmpB protein A4U88_RS18760 PF13533 Biotin-lipoyl like A4U88_RS18765 PF11742 A4U88_RS18765 A4U88_RS18770 PF11769 A4U88_RS18770 A4U88_RS18775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS18775 PF03466 LysR substrate binding domain A4U88_RS18780 PF03929 A4U88_RS18780 A4U88_RS18780 PF10749 A4U88_RS18780 A4U88_RS18785 PF11162 A4U88_RS18785 A4U88_RS18790 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS18805 PF06551 A4U88_RS18805 A4U88_RS18810 PF06551 A4U88_RS18810 A4U88_RS18815 PF00583 Acetyltransferase (GNAT) family A4U88_RS18820 PF08241 Methyltransferase domain A4U88_RS18825 PF00583 Acetyltransferase (GNAT) family A4U88_RS18830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS18830 PF03466 LysR substrate binding domain A4U88_RS18835 PF07566 Domain of Unknown Function (DUF1543) A4U88_RS18840 PF09926 A4U88_RS18840 A4U88_RS18845 PF14542 GCN5-related N-acetyl-transferase A4U88_RS18850 PF06902 Divergent 4Fe-4S mono-cluster A4U88_RS18855 PF07681 A4U88_RS18855 A4U88_RS18860 PF01713 Smr domain A4U88_RS18865 PF04899 A4U88_RS18865 A4U88_RS18870 PF06711 A4U88_RS18870 A4U88_RS18875 PF09400 Protein of unknown function (DUF2002) A4U88_RS18880 PF07690 Major Facilitator Superfamily A4U88_RS18885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS18885 PF03466 LysR substrate binding domain A4U88_RS18890 PF07690 Major Facilitator Superfamily A4U88_RS18895 PF14534 Domain of unknown function (DUF4440) A4U88_RS18905 PF05957 A4U88_RS18905 A4U88_RS18910 PF00155 Aminotransferase class I and II A4U88_RS18910 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS18915 PF02627 Carboxymuconolactone decarboxylase family A4U88_RS18920 PF00462 Glutaredoxin A4U88_RS18925 PF07972 NrdI Flavodoxin like A4U88_RS18930 PF00317 Ribonucleotide reductase, all-alpha domain A4U88_RS18930 PF02867 Ribonucleotide reductase, barrel domain A4U88_RS18930 PF08343 Ribonucleotide reductase N-terminal A4U88_RS18935 PF00268 Ribonucleotide reductase, small chain A4U88_RS18940 PF05016 Plasmid stabilisation system protein A4U88_RS18945 PF01402 Ribbon-helix-helix protein, copG family A4U88_RS18950 PF06945 A4U88_RS18950 A4U88_RS18955 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS18960 PF00753 Metallo-beta-lactamase superfamily A4U88_RS18965 PF01734 Patatin-like phospholipase A4U88_RS18970 PF03390 A4U88_RS18970 A4U88_RS18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS18975 PF13188 PAS domain A4U88_RS18975 PF17203 A4U88_RS18975 A4U88_RS18980 PF00072 Response regulator receiver domain A4U88_RS18980 PF12431 A4U88_RS18980 A4U88_RS18985 PF00005 ABC transporter A4U88_RS18985 PF00571 CBS domain A4U88_RS18990 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS18995 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A4U88_RS19000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS19000 PF03466 LysR substrate binding domain A4U88_RS19005 PF07690 Major Facilitator Superfamily A4U88_RS19010 PF03591 A4U88_RS19010 A4U88_RS19015 PF05437 A4U88_RS19015 A4U88_RS19020 PF01047 MarR family A4U88_RS19025 PF02321 Outer membrane efflux protein A4U88_RS19030 PF00529 HlyD family secretion protein A4U88_RS19030 PF16576 A4U88_RS19030 A4U88_RS19035 PF07690 Major Facilitator Superfamily A4U88_RS19040 PF00588 SpoU rRNA Methylase family A4U88_RS19040 PF08032 RNA 2'-O ribose methyltransferase substrate binding A4U88_RS19045 PF00085 Thioredoxin A4U88_RS19050 PF03942 A4U88_RS19050 A4U88_RS19055 PF00583 Acetyltransferase (GNAT) family A4U88_RS19055 PF13380 CoA binding domain A4U88_RS19055 PF13549 ATP-grasp domain A4U88_RS19055 PF13607 Succinyl-CoA ligase like flavodoxin domain A4U88_RS19095 PF13242 HAD-hyrolase-like A4U88_RS19100 PF00005 ABC transporter A4U88_RS19100 PF09383 NIL domain A4U88_RS19105 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS19110 PF03180 NLPA lipoprotein A4U88_RS19115 PF16358 A4U88_RS19115 A4U88_RS19120 PF01980 Uncharacterised protein family UPF0066 A4U88_RS19125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A4U88_RS19125 PF03129 Anticodon binding domain A4U88_RS19125 PF04073 Aminoacyl-tRNA editing domain A4U88_RS19130 PF04170 NlpE N-terminal domain A4U88_RS19130 PF17185 A4U88_RS19130 A4U88_RS19135 PF00472 RF-1 domain A4U88_RS19140 PF07152 YaeQ protein A4U88_RS19145 PF06786 A4U88_RS19145 A4U88_RS19150 PF07073 Modulator of Rho-dependent transcription termination (ROF) A4U88_RS19155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A4U88_RS19160 PF01171 PP-loop family A4U88_RS19160 PF09179 TilS substrate binding domain A4U88_RS19160 PF11734 TilS substrate C-terminal domain A4U88_RS19170 PF01276 Orn/Lys/Arg decarboxylase, major domain A4U88_RS19170 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A4U88_RS19170 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A4U88_RS19175 PF13520 Amino acid permease A4U88_RS19185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS19190 PF01276 Orn/Lys/Arg decarboxylase, major domain A4U88_RS19190 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A4U88_RS19190 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A4U88_RS19195 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A4U88_RS19200 PF01336 OB-fold nucleic acid binding domain A4U88_RS19200 PF02811 PHP domain A4U88_RS19200 PF07733 Bacterial DNA polymerase III alpha subunit A4U88_RS19200 PF14579 Helix-hairpin-helix motif A4U88_RS19205 PF01351 Ribonuclease HII A4U88_RS19210 PF02684 A4U88_RS19210 A4U88_RS19215 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS19215 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A4U88_RS19225 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS19225 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A4U88_RS19230 PF03938 Outer membrane protein (OmpH-like) A4U88_RS19235 PF01103 Surface antigen A4U88_RS19235 PF07244 Surface antigen variable number repeat A4U88_RS19240 PF02163 Peptidase family M50 A4U88_RS19240 PF13180 PDZ domain A4U88_RS19245 PF01148 Cytidylyltransferase family A4U88_RS19250 PF01255 Putative undecaprenyl diphosphate synthase A4U88_RS19255 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A4U88_RS19255 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal A4U88_RS19255 PF13288 DXP reductoisomerase C-terminal domain A4U88_RS19260 PF01765 Ribosome recycling factor A4U88_RS19265 PF00696 Amino acid kinase family A4U88_RS19270 PF00889 Elongation factor TS A4U88_RS19275 PF00318 Ribosomal protein S2 A4U88_RS19280 PF00557 Metallopeptidase family M24 A4U88_RS19285 PF01842 ACT domain A4U88_RS19285 PF01909 Nucleotidyltransferase domain A4U88_RS19285 PF01966 HD domain A4U88_RS19285 PF08335 GlnD PII-uridylyltransferase A4U88_RS19290 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS19290 PF14602 Hexapeptide repeat of succinyl-transferase A4U88_RS19290 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal A4U88_RS19295 PF11944 A4U88_RS19295 A4U88_RS19300 PF00258 Flavodoxin A4U88_RS19305 PF00849 RNA pseudouridylate synthase A4U88_RS19310 PF00905 Penicillin binding protein transpeptidase domain A4U88_RS19310 PF00912 Transglycosylase A4U88_RS19310 PF06832 A4U88_RS19310 A4U88_RS19315 PF00207 Alpha-2-macroglobulin family A4U88_RS19315 PF01835 MG2 domain A4U88_RS19315 PF07703 Alpha-2-macroglobulin family N-terminal region A4U88_RS19315 PF11974 Alpha-2-macroglobulin MG1 domain A4U88_RS19320 PF04287 tRNA pseudouridine synthase C A4U88_RS19325 PF07690 Major Facilitator Superfamily A4U88_RS19330 PF07348 Syd protein (SUKH-2) A4U88_RS19335 PF14489 QueF-like protein A4U88_RS19335 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term A4U88_RS19340 PF03641 Possible lysine decarboxylase A4U88_RS19340 PF11892 Domain of unknown function (DUF3412) A4U88_RS19340 PF14793 Domain of unknown function (DUF4478) A4U88_RS19345 PF01367 5'-3' exonuclease, C-terminal SAM fold A4U88_RS19345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A4U88_RS19350 PF01728 FtsJ-like methyltransferase A4U88_RS19350 PF03439 Early transcription elongation factor of RNA pol II, NGN section A4U88_RS19355 PF04241 A4U88_RS19355 A4U88_RS19365 PF06004 Bacterial protein of unknown function (DUF903) A4U88_RS19370 PF00266 Aminotransferase class-V A4U88_RS19375 PF02657 Fe-S metabolism associated domain A4U88_RS19380 PF00899 ThiF family A4U88_RS19385 PF03562 MltA specific insert domain A4U88_RS19385 PF06725 3D domain A4U88_RS19405 PF01520 N-acetylmuramoyl-L-alanine amidase A4U88_RS19405 PF11741 AMIN domain A4U88_RS19410 PF00583 Acetyltransferase (GNAT) family A4U88_RS19410 PF00696 Amino acid kinase family A4U88_RS19415 PF13538 UvrD-like helicase C-terminal domain A4U88_RS19415 PF13604 AAA domain A4U88_RS19420 PF00580 UvrD/REP helicase N-terminal domain A4U88_RS19420 PF13361 UvrD-like helicase C-terminal domain A4U88_RS19425 PF00675 Insulinase (Peptidase family M16) A4U88_RS19425 PF05193 Peptidase M16 inactive domain A4U88_RS19425 PF16187 A4U88_RS19425 A4U88_RS19430 PF04257 Exodeoxyribonuclease V, gamma subunit A4U88_RS19435 PF12528 A4U88_RS19435 A4U88_RS19440 PF10713 A4U88_RS19440 A4U88_RS19450 PF13544 A4U88_RS19450 A4U88_RS19455 PF00303 Thymidylate synthase A4U88_RS19460 PF01790 A4U88_RS19460 A4U88_RS19465 PF00391 PEP-utilising enzyme, mobile domain A4U88_RS19465 PF01590 GAF domain A4U88_RS19465 PF02896 PEP-utilising enzyme, TIM barrel domain A4U88_RS19465 PF05524 PEP-utilising enzyme, N-terminal A4U88_RS19470 PF00293 NUDIX domain A4U88_RS19475 PF02976 DNA mismatch repair enzyme MutH A4U88_RS19480 PF03741 A4U88_RS19480 A4U88_RS19485 PF06004 Bacterial protein of unknown function (DUF903) A4U88_RS19490 PF00248 Aldo/keto reductase family A4U88_RS19500 PF00501 AMP-binding enzyme A4U88_RS19500 PF01553 Acyltransferase A4U88_RS19505 PF00384 Molybdopterin oxidoreductase A4U88_RS19505 PF01568 Molydopterin dinucleotide binding domain A4U88_RS19510 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS19510 PF13377 Periplasmic binding protein-like domain A4U88_RS19515 PF05973 A4U88_RS19515 A4U88_RS19520 PF13744 Helix-turn-helix domain A4U88_RS19525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A4U88_RS19525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A4U88_RS19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS19530 PF03466 LysR substrate binding domain A4U88_RS19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS19535 PF03466 LysR substrate binding domain A4U88_RS19540 PF00753 Metallo-beta-lactamase superfamily A4U88_RS19545 PF01323 DSBA-like thioredoxin domain A4U88_RS19555 PF00005 ABC transporter A4U88_RS19555 PF06472 A4U88_RS19555 A4U88_RS19560 PF03610 PTS system fructose IIA component A4U88_RS19565 PF03613 A4U88_RS19565 A4U88_RS19570 PF03609 A4U88_RS19570 A4U88_RS19575 PF03830 PTS system sorbose subfamily IIB component A4U88_RS19580 PF08013 Tagatose 6 phosphate kinase A4U88_RS19590 PF07690 Major Facilitator Superfamily A4U88_RS19600 PF00005 ABC transporter A4U88_RS19600 PF00664 ABC transporter transmembrane region A4U88_RS19605 PF00589 Phage integrase family A4U88_RS19610 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS19615 PF00072 Response regulator receiver domain A4U88_RS19615 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS19620 PF00419 Fimbrial protein A4U88_RS19625 PF00419 Fimbrial protein A4U88_RS19630 PF00577 Outer membrane usher protein A4U88_RS19630 PF13953 PapC C-terminal domain A4U88_RS19630 PF13954 PapC N-terminal domain A4U88_RS19635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS19635 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U88_RS19640 PF00419 Fimbrial protein A4U88_RS19645 PF00589 Phage integrase family A4U88_RS19650 PF00550 Phosphopantetheine attachment site A4U88_RS19665 PF00005 ABC transporter A4U88_RS19665 PF02687 A4U88_RS19665 A4U88_RS19665 PF12704 MacB-like periplasmic core domain A4U88_RS19670 PF16576 A4U88_RS19670 A4U88_RS19685 PF01323 DSBA-like thioredoxin domain A4U88_RS19690 PF15959 A4U88_RS19690 A4U88_RS19695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS19695 PF03466 LysR substrate binding domain A4U88_RS19700 PF02652 A4U88_RS19700 A4U88_RS19705 PF01070 FMN-dependent dehydrogenase A4U88_RS19710 PF10703 Molybdenum cofactor biosynthesis protein F A4U88_RS19715 PF07690 Major Facilitator Superfamily A4U88_RS19720 PF00296 Luciferase-like monooxygenase A4U88_RS19730 PF02028 BCCT family transporter A4U88_RS19735 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS19735 PF13977 Bacterial transcriptional repressor A4U88_RS19745 PF06445 GyrI-like small molecule binding domain A4U88_RS19745 PF12833 Helix-turn-helix domain A4U88_RS19750 PF01476 LysM domain A4U88_RS19750 PF01551 Peptidase family M23 A4U88_RS19755 PF00857 Isochorismatase family A4U88_RS19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS19760 PF03466 LysR substrate binding domain A4U88_RS19765 PF03729 A4U88_RS19765 A4U88_RS19775 PF00691 OmpA family A4U88_RS19785 PF10014 2OG-Fe dioxygenase A4U88_RS19795 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS19795 PF13377 Periplasmic binding protein-like domain A4U88_RS19800 PF00034 Cytochrome c A4U88_RS19800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A4U88_RS19810 PF12318 A4U88_RS19810 A4U88_RS19815 PF04074 Domain of unknown function (DUF386) A4U88_RS19820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4U88_RS19820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4U88_RS19825 PF07690 Major Facilitator Superfamily A4U88_RS19835 PF00152 tRNA synthetases class II (D, K and N) A4U88_RS19835 PF01336 OB-fold nucleic acid binding domain A4U88_RS19845 PF01368 DHH family A4U88_RS19845 PF02272 DHHA1 domain A4U88_RS19850 PF10411 Disulfide bond isomerase protein N-terminus A4U88_RS19850 PF13098 Thioredoxin-like domain A4U88_RS19855 PF00589 Phage integrase family A4U88_RS19855 PF02899 Phage integrase, N-terminal SAM-like domain A4U88_RS19860 PF00258 Flavodoxin A4U88_RS19865 PF06123 A4U88_RS19865 A4U88_RS19875 PF00072 Response regulator receiver domain A4U88_RS19875 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS19880 PF07254 A4U88_RS19880 A4U88_RS19885 PF03937 Flavinator of succinate dehydrogenase A4U88_RS19890 PF01571 Aminomethyltransferase folate-binding domain A4U88_RS19900 PF03006 A4U88_RS19900 A4U88_RS19905 PF13023 HD domain A4U88_RS19910 PF00294 pfkB family carbohydrate kinase A4U88_RS19915 PF00480 ROK family A4U88_RS19920 PF00834 Ribulose-phosphate 3 epimerase family A4U88_RS19925 PF02653 A4U88_RS19925 A4U88_RS19930 PF02653 A4U88_RS19930 A4U88_RS19935 PF00005 ABC transporter A4U88_RS19950 PF14384 A4U88_RS19950 A4U88_RS19955 PF04365 Protein of unknown function (DUF497) A4U88_RS19960 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS19970 PF00072 Response regulator receiver domain A4U88_RS19970 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS19975 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS19975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS19980 PF13673 Acetyltransferase (GNAT) domain A4U88_RS19995 PF01597 Glycine cleavage H-protein A4U88_RS20000 PF01571 Aminomethyltransferase folate-binding domain A4U88_RS20000 PF08669 Glycine cleavage T-protein C-terminal barrel domain A4U88_RS20005 PF01494 FAD binding domain A4U88_RS20010 PF01494 FAD binding domain A4U88_RS20015 PF00557 Metallopeptidase family M24 A4U88_RS20015 PF05195 Aminopeptidase P, N-terminal domain A4U88_RS20020 PF03695 Uncharacterised protein family (UPF0149) A4U88_RS20025 PF05164 Cell division protein ZapA A4U88_RS20035 PF01812 5-formyltetrahydrofolate cyclo-ligase family A4U88_RS20040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4U88_RS20040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4U88_RS20045 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A4U88_RS20050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS20050 PF03466 LysR substrate binding domain A4U88_RS20055 PF04402 Protein of unknown function (DUF541) A4U88_RS20060 PF01810 A4U88_RS20060 A4U88_RS20065 PF01614 Bacterial transcriptional regulator A4U88_RS20065 PF09339 IclR helix-turn-helix domain A4U88_RS20075 PF02653 A4U88_RS20075 A4U88_RS20080 PF13407 Periplasmic binding protein domain A4U88_RS20085 PF08450 SMP-30/Gluconolaconase/LRE-like region A4U88_RS20090 PF02615 Malate/L-lactate dehydrogenase A4U88_RS20095 PF04074 Domain of unknown function (DUF386) A4U88_RS20100 PF07690 Major Facilitator Superfamily A4U88_RS20105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A4U88_RS20105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A4U88_RS20110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A4U88_RS20115 PF01261 Xylose isomerase-like TIM barrel A4U88_RS20120 PF00596 Class II Aldolase and Adducin N-terminal domain A4U88_RS20125 PF00849 RNA pseudouridylate synthase A4U88_RS20130 PF09831 A4U88_RS20130 A4U88_RS20135 PF08908 A4U88_RS20135 A4U88_RS20140 PF01717 Cobalamin-independent synthase, Catalytic domain A4U88_RS20155 PF00924 Mechanosensitive ion channel A4U88_RS20155 PF05552 Conserved TM helix A4U88_RS20160 PF07077 A4U88_RS20160 A4U88_RS20165 PF01116 Fructose-bisphosphate aldolase class-II A4U88_RS20170 PF00162 Phosphoglycerate kinase A4U88_RS20175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4U88_RS20175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A4U88_RS20180 PF00005 ABC transporter A4U88_RS20185 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS20190 PF13416 Bacterial extracellular solute-binding protein A4U88_RS20195 PF00892 EamA-like transporter family A4U88_RS20200 PF01588 Putative tRNA binding domain A4U88_RS20205 PF10014 2OG-Fe dioxygenase A4U88_RS20210 PF05525 A4U88_RS20210 A4U88_RS20215 PF00456 Transketolase, thiamine diphosphate binding domain A4U88_RS20215 PF02779 Transketolase, pyrimidine binding domain A4U88_RS20215 PF02780 Transketolase, C-terminal domain A4U88_RS20220 PF01435 Peptidase family M48 A4U88_RS20225 PF00205 Thiamine pyrophosphate enzyme, central domain A4U88_RS20225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U88_RS20225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U88_RS20230 PF00171 Aldehyde dehydrogenase family A4U88_RS20235 PF01958 Domain of unknown function DUF108 A4U88_RS20235 PF03447 Homoserine dehydrogenase, NAD binding domain A4U88_RS20240 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS20245 PF12697 Alpha/beta hydrolase family A4U88_RS20250 PF07883 Cupin domain A4U88_RS20255 PF07690 Major Facilitator Superfamily A4U88_RS20260 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U88_RS20260 PF14759 Reductase C-terminal A4U88_RS20265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS20270 PF01614 Bacterial transcriptional regulator A4U88_RS20270 PF09339 IclR helix-turn-helix domain A4U88_RS20275 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS20280 PF00355 Rieske [2Fe-2S] domain A4U88_RS20290 PF00355 Rieske [2Fe-2S] domain A4U88_RS20295 PF07690 Major Facilitator Superfamily A4U88_RS20300 PF01848 A4U88_RS20300 A4U88_RS20305 PF00491 Arginase family A4U88_RS20310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A4U88_RS20310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A4U88_RS20315 PF00438 S-adenosylmethionine synthetase, N-terminal domain A4U88_RS20315 PF02772 S-adenosylmethionine synthetase, central domain A4U88_RS20315 PF02773 S-adenosylmethionine synthetase, C-terminal domain A4U88_RS20320 PF01848 A4U88_RS20320 A4U88_RS20325 PF01032 FecCD transport family A4U88_RS20330 PF01497 Periplasmic binding protein A4U88_RS20335 PF00005 ABC transporter A4U88_RS20340 PF00593 TonB dependent receptor A4U88_RS20340 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS20345 PF00905 Penicillin binding protein transpeptidase domain A4U88_RS20345 PF00912 Transglycosylase A4U88_RS20345 PF14812 A4U88_RS20345 A4U88_RS20345 PF14814 Bifunctional transglycosylase second domain A4U88_RS20350 PF00270 DEAD/DEAH box helicase A4U88_RS20350 PF00271 Helicase conserved C-terminal domain A4U88_RS20350 PF04408 Helicase associated domain (HA2) A4U88_RS20350 PF08482 A4U88_RS20350 A4U88_RS20355 PF02834 LigT like Phosphoesterase A4U88_RS20360 PF03749 Sugar fermentation stimulation protein A4U88_RS20370 PF01258 Prokaryotic dksA/traR C4-type zinc finger A4U88_RS20375 PF00749 tRNA synthetases class I (E and Q), catalytic domain A4U88_RS20380 PF01743 Poly A polymerase head domain A4U88_RS20380 PF12626 Polymerase A arginine-rich C-terminus A4U88_RS20380 PF12627 Probable RNA and SrmB- binding site of polymerase A A4U88_RS20385 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A4U88_RS20390 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS20390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS20390 PF08521 A4U88_RS20390 A4U88_RS20395 PF00072 Response regulator receiver domain A4U88_RS20395 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS20400 PF02548 Ketopantoate hydroxymethyltransferase A4U88_RS20405 PF02569 Pantoate-beta-alanine ligase A4U88_RS20410 PF02261 Aspartate decarboxylase A4U88_RS20420 PF01061 A4U88_RS20420 A4U88_RS20425 PF00005 ABC transporter A4U88_RS20435 PF00156 Phosphoribosyl transferase domain A4U88_RS20440 PF00394 Multicopper oxidase A4U88_RS20440 PF07731 Multicopper oxidase A4U88_RS20440 PF07732 Multicopper oxidase A4U88_RS20445 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) A4U88_RS20450 PF01564 Spermine/spermidine synthase A4U88_RS20455 PF02675 S-adenosylmethionine decarboxylase A4U88_RS20460 PF06062 A4U88_RS20460 A4U88_RS20475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A4U88_RS20475 PF00364 Biotin-requiring enzyme A4U88_RS20475 PF02817 e3 binding domain A4U88_RS20480 PF00456 Transketolase, thiamine diphosphate binding domain A4U88_RS20485 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS20485 PF07729 FCD domain A4U88_RS20490 PF00324 Amino acid permease A4U88_RS20500 PF00034 Cytochrome c A4U88_RS20500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A4U88_RS20505 PF01799 [2Fe-2S] binding domain A4U88_RS20510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase A4U88_RS20515 PF12804 MobA-like NTP transferase domain A4U88_RS20520 PF02625 XdhC and CoxI family A4U88_RS20520 PF13478 XdhC Rossmann domain A4U88_RS20525 PF12833 Helix-turn-helix domain A4U88_RS20530 PF05681 A4U88_RS20530 A4U88_RS20530 PF05683 Fumarase C-terminus A4U88_RS20535 PF10263 A4U88_RS20535 A4U88_RS20540 PF04231 Endonuclease I A4U88_RS20545 PF04452 RNA methyltransferase A4U88_RS20550 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A4U88_RS20550 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A4U88_RS20555 PF02622 Uncharacterized ACR, COG1678 A4U88_RS20560 PF03652 Uncharacterised protein family (UPF0081) A4U88_RS20565 PF00437 Type II/IV secretion system protein A4U88_RS20570 PF01168 Alanine racemase, N-terminal domain A4U88_RS20575 PF03807 NADP oxidoreductase coenzyme F420-dependent A4U88_RS20575 PF14748 Pyrroline-5-carboxylate reductase dimerisation A4U88_RS20580 PF02325 A4U88_RS20580 A4U88_RS20585 PF02594 Uncharacterised ACR, YggU family COG1872 A4U88_RS20590 PF01725 Ham1 family A4U88_RS20595 PF04055 Radical SAM superfamily A4U88_RS20595 PF06969 HemN C-terminal domain A4U88_RS20600 PF01724 Domain of unknown function DUF29 A4U88_RS20605 PF11101 A4U88_RS20605 A4U88_RS20610 PF04960 Glutaminase A4U88_RS20615 PF04320 A4U88_RS20615 A4U88_RS20620 PF02390 Putative methyltransferase A4U88_RS20625 PF00633 Helix-hairpin-helix motif A4U88_RS20625 PF00730 HhH-GPD superfamily base excision DNA repair protein A4U88_RS20625 PF10576 Iron-sulfur binding domain of endonuclease III A4U88_RS20625 PF14815 NUDIX domain A4U88_RS20630 PF04362 Bacterial Fe(2+) trafficking A4U88_RS20635 PF01464 Transglycosylase SLT domain A4U88_RS20635 PF11873 Domain of unknown function (DUF3393) A4U88_RS20640 PF01276 Orn/Lys/Arg decarboxylase, major domain A4U88_RS20640 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A4U88_RS20640 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A4U88_RS20650 PF05638 Protein of unknown function (DUF796) A4U88_RS20655 PF05638 Protein of unknown function (DUF796) A4U88_RS20665 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) A4U88_RS20670 PF14305 A4U88_RS20670 A4U88_RS20675 PF00756 Putative esterase A4U88_RS20680 PF00583 Acetyltransferase (GNAT) family A4U88_RS20685 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS20685 PF08448 PAS fold A4U88_RS20690 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A4U88_RS20695 PF13443 Cro/C1-type HTH DNA-binding domain A4U88_RS20700 PF02592 A4U88_RS20700 A4U88_RS20705 PF14489 QueF-like protein A4U88_RS20705 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term A4U88_RS20710 PF04185 Phosphoesterase family A4U88_RS20710 PF05506 A4U88_RS20710 A4U88_RS20715 PF01497 Periplasmic binding protein A4U88_RS20720 PF00593 TonB dependent receptor A4U88_RS20720 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS20725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS20725 PF03466 LysR substrate binding domain A4U88_RS20730 PF01546 Peptidase family M20/M25/M40 A4U88_RS20730 PF07687 Peptidase dimerisation domain A4U88_RS20735 PF01546 Peptidase family M20/M25/M40 A4U88_RS20735 PF07687 Peptidase dimerisation domain A4U88_RS20740 PF03806 A4U88_RS20740 A4U88_RS20745 PF00294 pfkB family carbohydrate kinase A4U88_RS20750 PF11471 A4U88_RS20750 A4U88_RS20750 PF16966 A4U88_RS20750 A4U88_RS20755 PF00367 phosphotransferase system, EIIB A4U88_RS20755 PF02378 Phosphotransferase system, EIIC A4U88_RS20760 PF00251 Glycosyl hydrolases family 32 N-terminal domain A4U88_RS20765 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS20765 PF13377 Periplasmic binding protein-like domain A4U88_RS20770 PF02472 Biopolymer transport protein ExbD/TolR A4U88_RS20775 PF01618 A4U88_RS20775 A4U88_RS20780 PF01053 Cys/Met metabolism PLP-dependent enzyme A4U88_RS20785 PF09335 A4U88_RS20785 A4U88_RS20790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS20790 PF03466 LysR substrate binding domain A4U88_RS20795 PF00107 Zinc-binding dehydrogenase A4U88_RS20795 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS20800 PF06719 A4U88_RS20800 A4U88_RS20800 PF12833 Helix-turn-helix domain A4U88_RS20805 PF00465 Iron-containing alcohol dehydrogenase A4U88_RS20810 PF00248 Aldo/keto reductase family A4U88_RS20815 PF01464 Transglycosylase SLT domain A4U88_RS20820 PF04055 Radical SAM superfamily A4U88_RS20820 PF08497 A4U88_RS20820 A4U88_RS20820 PF11842 A4U88_RS20820 A4U88_RS20825 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS20825 PF07702 UTRA domain A4U88_RS20830 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A4U88_RS20835 PF00294 pfkB family carbohydrate kinase A4U88_RS20840 PF03825 A4U88_RS20840 A4U88_RS20845 PF01048 Phosphorylase superfamily A4U88_RS20850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS20850 PF03466 LysR substrate binding domain A4U88_RS20855 PF00394 Multicopper oxidase A4U88_RS20855 PF07731 Multicopper oxidase A4U88_RS20855 PF07732 Multicopper oxidase A4U88_RS20865 PF00521 DNA gyrase/topoisomerase IV, subunit A A4U88_RS20865 PF03989 DNA gyrase C-terminal domain, beta-propeller A4U88_RS20870 PF02525 Flavodoxin-like fold A4U88_RS20875 PF03992 Antibiotic biosynthesis monooxygenase A4U88_RS20880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS20880 PF03466 LysR substrate binding domain A4U88_RS20885 PF00204 DNA gyrase B A4U88_RS20885 PF00986 DNA gyrase B subunit, carboxyl terminus A4U88_RS20885 PF01751 Toprim domain A4U88_RS20885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS20890 PF05728 Uncharacterised protein family (UPF0227) A4U88_RS20895 PF00149 Calcineurin-like phosphoesterase A4U88_RS20900 PF06853 A4U88_RS20900 A4U88_RS20905 PF00293 NUDIX domain A4U88_RS20910 PF02321 Outer membrane efflux protein A4U88_RS20915 PF00158 Sigma-54 interaction domain A4U88_RS20915 PF00989 PAS fold A4U88_RS20915 PF02954 Bacterial regulatory protein, Fis family A4U88_RS20920 PF00381 PTS HPr component phosphorylation site A4U88_RS20920 PF00391 PEP-utilising enzyme, mobile domain A4U88_RS20920 PF03610 PTS system fructose IIA component A4U88_RS20920 PF05524 PEP-utilising enzyme, N-terminal A4U88_RS20930 PF02733 Dak1 domain A4U88_RS20935 PF00465 Iron-containing alcohol dehydrogenase A4U88_RS20940 PF06693 A4U88_RS20940 A4U88_RS20945 PF03738 Glutathionylspermidine synthase preATP-grasp A4U88_RS20950 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase A4U88_RS20955 PF00245 Alkaline phosphatase A4U88_RS20960 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A4U88_RS20965 PF04380 A4U88_RS20965 A4U88_RS20970 PF00294 pfkB family carbohydrate kinase A4U88_RS20970 PF01467 Cytidylyltransferase A4U88_RS20975 PF03710 Glutamate-ammonia ligase adenylyltransferase A4U88_RS20975 PF08335 GlnD PII-uridylyltransferase A4U88_RS20980 PF01928 CYTH domain A4U88_RS20985 PF08239 Bacterial SH3 domain A4U88_RS20990 PF01743 Poly A polymerase head domain A4U88_RS20990 PF01966 HD domain A4U88_RS20990 PF12627 Probable RNA and SrmB- binding site of polymerase A A4U88_RS20995 PF02673 A4U88_RS20995 A4U88_RS21000 PF02152 Dihydroneopterin aldolase A4U88_RS21005 PF02660 A4U88_RS21005 A4U88_RS21010 PF00814 Glycoprotease family A4U88_RS21015 PF01165 Ribosomal protein S21 A4U88_RS21020 PF01807 CHC2 zinc finger A4U88_RS21020 PF08275 DNA primase catalytic core, N-terminal domain A4U88_RS21020 PF08278 DNA primase DnaG DnaB-binding A4U88_RS21020 PF10410 DnaB-helicase binding domain of primase A4U88_RS21020 PF13155 Toprim-like A4U88_RS21025 PF00140 Sigma-70 factor, region 1 A4U88_RS21025 PF03979 Sigma-70 factor, region 1 A4U88_RS21025 PF04539 Sigma-70 region 3 A4U88_RS21025 PF04542 Sigma-70 region 2 A4U88_RS21025 PF04545 Sigma-70, region 4 A4U88_RS21025 PF04546 Sigma-70, non-essential region A4U88_RS21030 PF12680 SnoaL-like domain A4U88_RS21035 PF03167 Uracil DNA glycosylase superfamily A4U88_RS21045 PF08279 HTH domain A4U88_RS21045 PF13280 A4U88_RS21045 A4U88_RS21055 PF00583 Acetyltransferase (GNAT) family A4U88_RS21070 PF04982 A4U88_RS21070 A4U88_RS21075 PF13417 Glutathione S-transferase, N-terminal domain A4U88_RS21075 PF14834 Glutathione S-transferase, C-terminal domain A4U88_RS21080 PF03222 Tryptophan/tyrosine permease family A4U88_RS21085 PF00171 Aldehyde dehydrogenase family A4U88_RS21090 PF00202 Aminotransferase class-III A4U88_RS21095 PF00155 Aminotransferase class I and II A4U88_RS21095 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS21100 PF00313 'Cold-shock' DNA-binding domain A4U88_RS21105 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A4U88_RS21110 PF00005 ABC transporter A4U88_RS21115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4U88_RS21115 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U88_RS21120 PF05175 Methyltransferase small domain A4U88_RS21125 PF01863 Protein of unknown function DUF45 A4U88_RS21135 PF00117 Glutamine amidotransferase class-I A4U88_RS21140 PF03741 A4U88_RS21140 A4U88_RS21145 PF00375 Sodium:dicarboxylate symporter family A4U88_RS21150 PF04295 A4U88_RS21150 A4U88_RS21150 PF08666 SAF domain A4U88_RS21155 PF02614 Glucuronate isomerase A4U88_RS21160 PF07690 Major Facilitator Superfamily A4U88_RS21165 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS21165 PF07729 FCD domain A4U88_RS21175 PF09335 A4U88_RS21175 A4U88_RS21180 PF13721 SecD export protein N-terminal TM region A4U88_RS21185 PF06476 A4U88_RS21185 A4U88_RS21190 PF05957 A4U88_RS21190 A4U88_RS21195 PF07332 A4U88_RS21195 A4U88_RS21200 PF13997 A4U88_RS21200 A4U88_RS21205 PF07681 A4U88_RS21205 A4U88_RS21210 PF13409 Glutathione S-transferase, N-terminal domain A4U88_RS21210 PF13410 Glutathione S-transferase, C-terminal domain A4U88_RS21215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS21215 PF03466 LysR substrate binding domain A4U88_RS21220 PF02678 Pirin A4U88_RS21230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A4U88_RS21235 PF04348 LppC putative lipoprotein A4U88_RS21240 PF02021 Uncharacterised protein family UPF0102 A4U88_RS21245 PF13580 SIS domain A4U88_RS21250 PF04972 BON domain A4U88_RS21255 PF00912 Transglycosylase A4U88_RS21265 PF00072 Response regulator receiver domain A4U88_RS21265 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS21265 PF00989 PAS fold A4U88_RS21265 PF01627 Hpt domain A4U88_RS21265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS21270 PF04055 Radical SAM superfamily A4U88_RS21270 PF16199 A4U88_RS21270 A4U88_RS21280 PF00310 Glutamine amidotransferases class-II A4U88_RS21280 PF01493 GXGXG motif A4U88_RS21280 PF01645 Conserved region in glutamate synthase A4U88_RS21280 PF04898 Glutamate synthase central domain A4U88_RS21285 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U88_RS21285 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A4U88_RS21295 PF04386 Stringent starvation protein B A4U88_RS21300 PF00043 Glutathione S-transferase, C-terminal domain A4U88_RS21300 PF02798 Glutathione S-transferase, N-terminal domain A4U88_RS21305 PF00380 Ribosomal protein S9/S16 A4U88_RS21310 PF00572 Ribosomal protein L13 A4U88_RS21320 PF03969 AFG1-like ATPase A4U88_RS21325 PF06295 A4U88_RS21325 A4U88_RS21330 PF00595 PDZ domain (Also known as DHR or GLGF) A4U88_RS21330 PF13180 PDZ domain A4U88_RS21330 PF13365 Trypsin-like peptidase domain A4U88_RS21335 PF13180 PDZ domain A4U88_RS21335 PF13365 Trypsin-like peptidase domain A4U88_RS21340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A4U88_RS21345 PF01722 BolA-like protein A4U88_RS21350 PF13466 STAS domain A4U88_RS21355 PF05494 Toluene tolerance, Ttg2 A4U88_RS21360 PF02470 A4U88_RS21360 A4U88_RS21365 PF02405 A4U88_RS21365 A4U88_RS21370 PF00005 ABC transporter A4U88_RS21375 PF01699 Sodium/calcium exchanger protein A4U88_RS21380 PF00571 CBS domain A4U88_RS21380 PF01380 SIS domain A4U88_RS21385 PF08282 haloacid dehalogenase-like hydrolase A4U88_RS21390 PF06835 Lipopolysaccharide-assembly, LptC-related A4U88_RS21395 PF03968 OstA-like protein A4U88_RS21400 PF00005 ABC transporter A4U88_RS21400 PF12399 Branched-chain amino acid ATP-binding cassette transporter A4U88_RS21405 PF00309 A4U88_RS21405 A4U88_RS21405 PF04552 Sigma-54, DNA binding domain A4U88_RS21405 PF04963 Sigma-54 factor, core binding domain A4U88_RS21410 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A4U88_RS21415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A4U88_RS21420 PF03668 A4U88_RS21420 A4U88_RS21425 PF00381 PTS HPr component phosphorylation site A4U88_RS21430 PF09907 A4U88_RS21430 A4U88_RS21435 PF01381 Helix-turn-helix A4U88_RS21445 PF10282 Lactonase, 7-bladed beta-propeller A4U88_RS21450 PF07071 Protein of unknown function (DUF1341) A4U88_RS21455 PF03841 L-seryl-tRNA selenium transferase A4U88_RS21460 PF01979 Amidohydrolase family A4U88_RS21470 PF14188 A4U88_RS21470 A4U88_RS21475 PF14189 A4U88_RS21475 A4U88_RS21480 PF14272 A4U88_RS21480 A4U88_RS21490 PF01272 Transcription elongation factor, GreA/GreB, C-term A4U88_RS21490 PF14760 Rnk N-terminus A4U88_RS21500 PF00551 Formyl transferase A4U88_RS21505 PF13454 FAD-NAD(P)-binding A4U88_RS21510 PF02311 AraC-like ligand binding domain A4U88_RS21510 PF12833 Helix-turn-helix domain A4U88_RS21515 PF07361 Cytochrome b562 A4U88_RS21520 PF01523 Putative modulator of DNA gyrase A4U88_RS21525 PF04751 Protein of unknown function (DUF615) A4U88_RS21530 PF01337 Barstar (barnase inhibitor) A4U88_RS21535 PF00545 ribonuclease A4U88_RS21545 PF13437 HlyD family secretion protein A4U88_RS21545 PF13533 Biotin-lipoyl like A4U88_RS21550 PF07869 A4U88_RS21550 A4U88_RS21555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS21555 PF03466 LysR substrate binding domain A4U88_RS21565 PF12773 A4U88_RS21565 A4U88_RS21570 PF01156 Inosine-uridine preferring nucleoside hydrolase A4U88_RS21575 PF04932 A4U88_RS21575 A4U88_RS21575 PF11846 A4U88_RS21575 A4U88_RS21575 PF15864 A4U88_RS21575 A4U88_RS21580 PF02611 CDP-diacylglycerol pyrophosphatase A4U88_RS21585 PF01523 Putative modulator of DNA gyrase A4U88_RS21590 PF00795 Carbon-nitrogen hydrolase A4U88_RS21600 PF00575 S1 RNA binding domain A4U88_RS21600 PF10150 Ribonuclease E/G family A4U88_RS21605 PF02545 Maf-like protein A4U88_RS21610 PF04093 A4U88_RS21610 A4U88_RS21615 PF04085 rod shape-determining protein MreC A4U88_RS21620 PF06723 MreB/Mbl protein A4U88_RS21630 PF00107 Zinc-binding dehydrogenase A4U88_RS21630 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS21635 PF00174 Oxidoreductase molybdopterin binding domain A4U88_RS21640 PF01794 A4U88_RS21640 A4U88_RS21645 PF01220 Dehydroquinase class II A4U88_RS21650 PF00364 Biotin-requiring enzyme A4U88_RS21655 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain A4U88_RS21655 PF02785 Biotin carboxylase C-terminal domain A4U88_RS21655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4U88_RS21665 PF07883 Cupin domain A4U88_RS21670 PF00056 lactate/malate dehydrogenase, NAD binding domain A4U88_RS21680 PF07690 Major Facilitator Superfamily A4U88_RS21690 PF06196 A4U88_RS21690 A4U88_RS21695 PF00474 Sodium:solute symporter family A4U88_RS21700 PF06325 Ribosomal protein L11 methyltransferase (PrmA) A4U88_RS21705 PF01207 Dihydrouridine synthase (Dus) A4U88_RS21710 PF02954 Bacterial regulatory protein, Fis family A4U88_RS21720 PF05118 Aspartyl/Asparaginyl beta-hydroxylase A4U88_RS21725 PF03279 A4U88_RS21725 A4U88_RS21730 PF00117 Glutamine amidotransferase class-I A4U88_RS21735 PF00501 AMP-binding enzyme A4U88_RS21735 PF00550 Phosphopantetheine attachment site A4U88_RS21735 PF00668 Condensation domain A4U88_RS21735 PF00975 Thioesterase domain A4U88_RS21735 PF13193 AMP-binding enzyme C-terminal domain A4U88_RS21740 PF04172 A4U88_RS21740 A4U88_RS21745 PF03788 A4U88_RS21745 A4U88_RS21750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS21750 PF03466 LysR substrate binding domain A4U88_RS21755 PF00999 Sodium/hydrogen exchanger family A4U88_RS21760 PF00860 Permease family A4U88_RS21770 PF02798 Glutathione S-transferase, N-terminal domain A4U88_RS21770 PF14497 Glutathione S-transferase, C-terminal domain A4U88_RS21775 PF13924 A4U88_RS21775 A4U88_RS21780 PF07338 Protein of unknown function (DUF1471) A4U88_RS21785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS21785 PF03466 LysR substrate binding domain A4U88_RS21790 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS21795 PF07338 Protein of unknown function (DUF1471) A4U88_RS21800 PF04199 Putative cyclase A4U88_RS21805 PF00436 Single-strand binding protein family A4U88_RS21810 PF00005 ABC transporter A4U88_RS21815 PF00107 Zinc-binding dehydrogenase A4U88_RS21815 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS21820 PF12464 Maltose acetyltransferase A4U88_RS21820 PF14602 Hexapeptide repeat of succinyl-transferase A4U88_RS21825 PF04237 YjbR A4U88_RS21830 PF01894 Uncharacterised protein family UPF0047 A4U88_RS21840 PF01037 AsnC family A4U88_RS21840 PF13404 AsnC-type helix-turn-helix domain A4U88_RS21845 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS21850 PF00842 Alanine racemase, C-terminal domain A4U88_RS21850 PF01168 Alanine racemase, N-terminal domain A4U88_RS21855 PF00772 DnaB-like helicase N terminal domain A4U88_RS21855 PF03796 DnaB-like helicase C terminal domain A4U88_RS21860 PF00107 Zinc-binding dehydrogenase A4U88_RS21860 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS21865 PF09583 A4U88_RS21865 A4U88_RS21870 PF01207 Dihydrouridine synthase (Dus) A4U88_RS21875 PF13431 Tetratricopeptide repeat A4U88_RS21880 PF04542 Sigma-70 region 2 A4U88_RS21880 PF08281 Sigma-70, region 4 A4U88_RS21885 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS21885 PF12464 Maltose acetyltransferase A4U88_RS21885 PF14602 Hexapeptide repeat of succinyl-transferase A4U88_RS21890 PF01475 Ferric uptake regulator family A4U88_RS21895 PF05532 CsbD-like A4U88_RS21905 PF00717 Peptidase S24-like A4U88_RS21905 PF01726 LexA DNA binding domain A4U88_RS21910 PF01219 Prokaryotic diacylglycerol kinase A4U88_RS21920 PF01040 UbiA prenyltransferase family A4U88_RS21925 PF04345 Chorismate lyase A4U88_RS21930 PF00083 Sugar (and other) transporter A4U88_RS21935 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS21935 PF13377 Periplasmic binding protein-like domain A4U88_RS21940 PF01156 Inosine-uridine preferring nucleoside hydrolase A4U88_RS21950 PF02264 LamB porin A4U88_RS21955 PF00005 ABC transporter A4U88_RS21955 PF08402 TOBE domain A4U88_RS21970 PF13416 Bacterial extracellular solute-binding protein A4U88_RS21975 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS21975 PF14785 Maltose transport system permease protein MalF P2 domain A4U88_RS21980 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS21985 PF06146 A4U88_RS21985 A4U88_RS21995 PF00342 Phosphoglucose isomerase A4U88_RS22000 PF00999 Sodium/hydrogen exchanger family A4U88_RS22000 PF02254 TrkA-N domain A4U88_RS22005 PF00696 Amino acid kinase family A4U88_RS22010 PF01758 Sodium Bile acid symporter family A4U88_RS22015 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB A4U88_RS22015 PF08479 POTRA domain, ShlB-type A4U88_RS22020 PF05860 haemagglutination activity domain A4U88_RS22020 PF13332 A4U88_RS22020 A4U88_RS22025 PF01895 PhoU domain A4U88_RS22025 PF02690 A4U88_RS22025 A4U88_RS22030 PF00005 ABC transporter A4U88_RS22035 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS22045 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase A4U88_RS22050 PF13343 Bacterial extracellular solute-binding protein A4U88_RS22055 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS22055 PF07702 UTRA domain A4U88_RS22070 PF01202 Shikimate kinase A4U88_RS22075 PF02447 A4U88_RS22075 A4U88_RS22080 PF00920 Dehydratase family A4U88_RS22085 PF01081 KDPG and KHG aldolase A4U88_RS22090 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) A4U88_RS22095 PF00463 Isocitrate lyase family A4U88_RS22100 PF01274 Malate synthase A4U88_RS22105 PF04204 Homoserine O-succinyltransferase A4U88_RS22145 PF01488 Shikimate / quinate 5-dehydrogenase A4U88_RS22145 PF08501 Shikimate dehydrogenase substrate binding domain A4U88_RS22150 PF01300 Telomere recombination A4U88_RS22155 PF01396 A4U88_RS22155 A4U88_RS22160 PF04361 A4U88_RS22160 A4U88_RS22165 PF02481 DNA recombination-mediator protein A A4U88_RS22170 PF01327 Polypeptide deformylase A4U88_RS22175 PF00551 Formyl transferase A4U88_RS22175 PF02911 Formyl transferase, C-terminal domain A4U88_RS22180 PF01029 NusB family A4U88_RS22180 PF01189 NOL1/NOP2/sun family A4U88_RS22185 PF02080 TrkA-C domain A4U88_RS22185 PF02254 TrkA-N domain A4U88_RS22190 PF01741 Large-conductance mechanosensitive channel, MscL A4U88_RS22195 PF01797 Transposase IS200 like A4U88_RS22200 PF03889 A4U88_RS22200 A4U88_RS22205 PF13411 MerR HTH family regulatory protein A4U88_RS22210 PF09350 A4U88_RS22210 A4U88_RS22215 PF01196 Ribosomal protein L17 A4U88_RS22220 PF01000 RNA polymerase Rpb3/RpoA insert domain A4U88_RS22220 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A4U88_RS22220 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A4U88_RS22225 PF00163 Ribosomal protein S4/S9 N-terminal domain A4U88_RS22225 PF01479 S4 domain A4U88_RS22230 PF00411 Ribosomal protein S11 A4U88_RS22235 PF00416 Ribosomal protein S13/S18 A4U88_RS22240 PF00444 Ribosomal protein L36 A4U88_RS22245 PF00344 SecY translocase A4U88_RS22250 PF00828 Ribosomal protein L18e/L15 A4U88_RS22255 PF00327 Ribosomal protein L30p/L7e A4U88_RS22260 PF00333 Ribosomal protein S5, N-terminal domain A4U88_RS22260 PF03719 Ribosomal protein S5, C-terminal domain A4U88_RS22265 PF00861 Ribosomal L18p/L5e family A4U88_RS22270 PF00347 Ribosomal protein L6 A4U88_RS22275 PF00410 Ribosomal protein S8 A4U88_RS22280 PF00253 Ribosomal protein S14p/S29e A4U88_RS22285 PF00281 Ribosomal protein L5 A4U88_RS22285 PF00673 ribosomal L5P family C-terminus A4U88_RS22290 PF17136 A4U88_RS22290 A4U88_RS22295 PF00238 Ribosomal protein L14p/L23e A4U88_RS22300 PF00366 Ribosomal protein S17 A4U88_RS22305 PF00831 Ribosomal L29 protein A4U88_RS22310 PF00252 Ribosomal protein L16p/L10e A4U88_RS22315 PF00189 Ribosomal protein S3, C-terminal domain A4U88_RS22315 PF07650 KH domain A4U88_RS22320 PF00237 Ribosomal protein L22p/L17e A4U88_RS22325 PF00203 Ribosomal protein S19 A4U88_RS22330 PF00181 Ribosomal Proteins L2, RNA binding domain A4U88_RS22330 PF03947 Ribosomal Proteins L2, C-terminal domain A4U88_RS22335 PF00276 Ribosomal protein L23 A4U88_RS22340 PF00573 Ribosomal protein L4/L1 family A4U88_RS22345 PF00297 Ribosomal protein L3 A4U88_RS22350 PF00338 Ribosomal protein S10p/S20e A4U88_RS22355 PF00210 Ferritin-like domain A4U88_RS22360 PF04324 BFD-like [2Fe-2S] binding domain A4U88_RS22365 PF00009 Elongation factor Tu GTP binding domain A4U88_RS22365 PF03143 Elongation factor Tu C-terminal domain A4U88_RS22365 PF03144 Elongation factor Tu domain 2 A4U88_RS22370 PF00009 Elongation factor Tu GTP binding domain A4U88_RS22370 PF00679 Elongation factor G C-terminus A4U88_RS22370 PF03144 Elongation factor Tu domain 2 A4U88_RS22370 PF03764 Elongation factor G, domain IV A4U88_RS22370 PF14492 Elongation Factor G, domain II A4U88_RS22375 PF00177 Ribosomal protein S7p/S5e A4U88_RS22380 PF00164 Ribosomal protein S12/S23 A4U88_RS22385 PF04077 DsrH like protein A4U88_RS22390 PF02635 DsrE/DsrF-like family A4U88_RS22395 PF02635 DsrE/DsrF-like family A4U88_RS22400 PF08348 A4U88_RS22400 A4U88_RS22400 PF13309 A4U88_RS22400 A4U88_RS22405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U88_RS22405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A4U88_RS22410 PF04102 SlyX A4U88_RS22415 PF00155 Aminotransferase class I and II A4U88_RS22425 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS22425 PF13377 Periplasmic binding protein-like domain A4U88_RS22430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U88_RS22435 PF09526 A4U88_RS22435 A4U88_RS22440 PF00999 Sodium/hydrogen exchanger family A4U88_RS22440 PF02254 TrkA-N domain A4U88_RS22450 PF00005 ABC transporter A4U88_RS22450 PF12848 ABC transporter A4U88_RS22450 PF16326 A4U88_RS22450 A4U88_RS22455 PF02668 Taurine catabolism dioxygenase TauD, TfdA family A4U88_RS22460 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS22465 PF00005 ABC transporter A4U88_RS22470 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A4U88_RS22475 PF02567 Phenazine biosynthesis-like protein A4U88_RS22480 PF01810 A4U88_RS22480 A4U88_RS22485 PF00561 alpha/beta hydrolase fold A4U88_RS22490 PF06794 Uncharacterised protein family (UPF0270) A4U88_RS22500 PF02566 OsmC-like protein A4U88_RS22505 PF00027 Cyclic nucleotide-binding domain A4U88_RS22505 PF00325 Bacterial regulatory proteins, crp family A4U88_RS22510 PF12805 A4U88_RS22510 A4U88_RS22510 PF13515 A4U88_RS22510 A4U88_RS22515 PF00202 Aminotransferase class-III A4U88_RS22520 PF00117 Glutamine amidotransferase class-I A4U88_RS22530 PF13304 AAA domain A4U88_RS22530 PF13476 AAA domain A4U88_RS22535 PF05872 A4U88_RS22535 A4U88_RS22545 PF05016 Plasmid stabilisation system protein A4U88_RS22550 PF00072 Response regulator receiver domain A4U88_RS22550 PF04397 LytTr DNA-binding domain A4U88_RS22555 PF06580 A4U88_RS22555 A4U88_RS22555 PF07694 5TMR of 5TMR-LYT A4U88_RS22560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A4U88_RS22570 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit A4U88_RS22575 PF02056 Family 4 glycosyl hydrolase A4U88_RS22575 PF11975 Family 4 glycosyl hydrolase C-terminal domain A4U88_RS22580 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS22580 PF13377 Periplasmic binding protein-like domain A4U88_RS22585 PF07690 Major Facilitator Superfamily A4U88_RS22600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A4U88_RS22600 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A4U88_RS22600 PF04324 BFD-like [2Fe-2S] binding domain A4U88_RS22600 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U88_RS22605 PF13806 Rieske-like [2Fe-2S] domain A4U88_RS22610 PF01226 Formate/nitrite transporter A4U88_RS22615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A4U88_RS22615 PF10414 Sirohaem synthase dimerisation region A4U88_RS22615 PF13241 Putative NAD(P)-binding A4U88_RS22615 PF14824 Sirohaem biosynthesis protein central A4U88_RS22620 PF00579 tRNA synthetases class I (W and Y) A4U88_RS22625 PF13419 Haloacid dehalogenase-like hydrolase A4U88_RS22630 PF00834 Ribulose-phosphate 3 epimerase family A4U88_RS22635 PF02086 D12 class N6 adenine-specific DNA methyltransferase A4U88_RS22640 PF05036 Sporulation related domain A4U88_RS22645 PF01761 3-dehydroquinate synthase A4U88_RS22650 PF01202 Shikimate kinase A4U88_RS22660 PF10748 A4U88_RS22660 A4U88_RS22670 PF05137 A4U88_RS22670 A4U88_RS22680 PF00905 Penicillin binding protein transpeptidase domain A4U88_RS22680 PF00912 Transglycosylase A4U88_RS22680 PF17092 A4U88_RS22680 A4U88_RS22685 PF00293 NUDIX domain A4U88_RS22695 PF13419 Haloacid dehalogenase-like hydrolase A4U88_RS22700 PF01479 S4 domain A4U88_RS22705 PF01430 Hsp33 protein A4U88_RS22710 PF01293 Phosphoenolpyruvate carboxykinase A4U88_RS22720 PF01850 PIN domain A4U88_RS22725 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS22725 PF00672 HAMP domain A4U88_RS22725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS22730 PF00072 Response regulator receiver domain A4U88_RS22730 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS22735 PF13591 MerR HTH family regulatory protein A4U88_RS22740 PF00226 DnaJ domain A4U88_RS22740 PF01556 DnaJ C terminal domain A4U88_RS22745 PF01272 Transcription elongation factor, GreA/GreB, C-term A4U88_RS22745 PF03449 Transcription elongation factor, N-terminal A4U88_RS22750 PF00575 S1 RNA binding domain A4U88_RS22750 PF09371 Tex-like protein N-terminal domain A4U88_RS22750 PF12836 Helix-hairpin-helix motif A4U88_RS22750 PF16921 A4U88_RS22750 A4U88_RS22755 PF04023 FeoA domain A4U88_RS22760 PF02421 Ferrous iron transport protein B A4U88_RS22760 PF07664 A4U88_RS22760 A4U88_RS22760 PF07670 Nucleoside recognition A4U88_RS22765 PF09012 FeoC like transcriptional regulator A4U88_RS22770 PF07338 Protein of unknown function (DUF1471) A4U88_RS22775 PF00561 alpha/beta hydrolase fold A4U88_RS22780 PF00156 Phosphoribosyl transferase domain A4U88_RS22785 PF01106 NifU-like domain A4U88_RS22785 PF01521 Iron-sulphur cluster biosynthesis A4U88_RS22790 PF02446 4-alpha-glucanotransferase A4U88_RS22795 PF00343 Carbohydrate phosphorylase A4U88_RS22805 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS22810 PF00581 Rhodanese-like domain A4U88_RS22815 PF01694 Rhomboid family A4U88_RS22815 PF12122 Protein of unknown function (DUF3582) A4U88_RS22820 PF00455 A4U88_RS22820 A4U88_RS22820 PF08220 DeoR-like helix-turn-helix domain A4U88_RS22825 PF01266 FAD dependent oxidoreductase A4U88_RS22825 PF16901 A4U88_RS22825 A4U88_RS22830 PF00343 Carbohydrate phosphorylase A4U88_RS22835 PF00534 Glycosyl transferases group 1 A4U88_RS22835 PF08323 Starch synthase catalytic domain A4U88_RS22840 PF00483 Nucleotidyl transferase A4U88_RS22845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A4U88_RS22850 PF00128 Alpha amylase, catalytic domain A4U88_RS22850 PF02806 Alpha amylase, C-terminal all-beta domain A4U88_RS22850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A4U88_RS22855 PF01118 Semialdehyde dehydrogenase, NAD binding domain A4U88_RS22855 PF02774 Semialdehyde dehydrogenase, dimerisation domain A4U88_RS22860 PF01914 A4U88_RS22860 A4U88_RS22865 PF13671 AAA domain A4U88_RS22870 PF02447 A4U88_RS22870 A4U88_RS22875 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS22875 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A4U88_RS22880 PF02678 Pirin A4U88_RS22885 PF00583 Acetyltransferase (GNAT) family A4U88_RS22890 PF03576 Peptidase family S58 A4U88_RS22895 PF01261 Xylose isomerase-like TIM barrel A4U88_RS22900 PF01261 Xylose isomerase-like TIM barrel A4U88_RS22905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4U88_RS22905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A4U88_RS22915 PF00294 pfkB family carbohydrate kinase A4U88_RS22915 PF09863 Uncharacterized protein conserved in bacteria (DUF2090) A4U88_RS22920 PF01380 SIS domain A4U88_RS22920 PF01418 Helix-turn-helix domain, rpiR family A4U88_RS22935 PF04962 KduI/IolB family A4U88_RS22940 PF00171 Aldehyde dehydrogenase family A4U88_RS22945 PF00083 Sugar (and other) transporter A4U88_RS22950 PF01261 Xylose isomerase-like TIM barrel A4U88_RS22955 PF03649 A4U88_RS22955 A4U88_RS22960 PF00005 ABC transporter A4U88_RS22965 PF04703 FaeA-like protein A4U88_RS22980 PF00419 Fimbrial protein A4U88_RS22985 PF00419 Fimbrial protein A4U88_RS22990 PF00577 Outer membrane usher protein A4U88_RS22990 PF13953 PapC C-terminal domain A4U88_RS22990 PF13954 PapC N-terminal domain A4U88_RS22995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS22995 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U88_RS23000 PF00419 Fimbrial protein A4U88_RS23005 PF00419 Fimbrial protein A4U88_RS23010 PF00419 Fimbrial protein A4U88_RS23015 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS23020 PF00419 Fimbrial protein A4U88_RS23030 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U88_RS23030 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U88_RS23035 PF16970 A4U88_RS23035 A4U88_RS23040 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS23045 PF00155 Aminotransferase class I and II A4U88_RS23045 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS23050 PF00892 EamA-like transporter family A4U88_RS23060 PF07520 A4U88_RS23060 A4U88_RS23070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS23070 PF03466 LysR substrate binding domain A4U88_RS23075 PF00248 Aldo/keto reductase family A4U88_RS23080 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS23085 PF10604 Polyketide cyclase / dehydrase and lipid transport A4U88_RS23090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U88_RS23095 PF00027 Cyclic nucleotide-binding domain A4U88_RS23095 PF13545 Crp-like helix-turn-helix domain A4U88_RS23100 PF01156 Inosine-uridine preferring nucleoside hydrolase A4U88_RS23105 PF00962 Adenosine/AMP deaminase A4U88_RS23110 PF03486 HI0933-like protein A4U88_RS23115 PF01384 A4U88_RS23115 A4U88_RS23120 PF10625 A4U88_RS23120 A4U88_RS23125 PF13561 Enoyl-(Acyl carrier protein) reductase A4U88_RS23130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS23130 PF03466 LysR substrate binding domain A4U88_RS23135 PF00582 Universal stress protein family A4U88_RS23140 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4U88_RS23140 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A4U88_RS23145 PF13407 Periplasmic binding protein domain A4U88_RS23150 PF00005 ABC transporter A4U88_RS23155 PF02653 A4U88_RS23155 A4U88_RS23160 PF02653 A4U88_RS23160 A4U88_RS23165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A4U88_RS23165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A4U88_RS23170 PF01380 SIS domain A4U88_RS23175 PF04445 Putative SAM-dependent methyltransferase A4U88_RS23180 PF01432 Peptidase family M3 A4U88_RS23185 PF01230 HIT domain A4U88_RS23190 PF04266 ASCH domain A4U88_RS23195 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ A4U88_RS23200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A4U88_RS23200 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U88_RS23205 PF05163 DinB family A4U88_RS23210 PF02567 Phenazine biosynthesis-like protein A4U88_RS23220 PF00155 Aminotransferase class I and II A4U88_RS23220 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS23225 PF00174 Oxidoreductase molybdopterin binding domain A4U88_RS23235 PF00072 Response regulator receiver domain A4U88_RS23235 PF08667 BetR domain A4U88_RS23245 PF00082 Subtilase family A4U88_RS23245 PF03797 Autotransporter beta-domain A4U88_RS23245 PF12951 A4U88_RS23245 A4U88_RS23250 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS23260 PF01797 Transposase IS200 like A4U88_RS23265 PF07813 LTXXQ motif family protein A4U88_RS23270 PF00563 EAL domain A4U88_RS23270 PF00990 GGDEF domain A4U88_RS23270 PF13426 PAS domain A4U88_RS23275 PF00378 Enoyl-CoA hydratase/isomerase family A4U88_RS23280 PF03631 A4U88_RS23280 A4U88_RS23285 PF00083 Sugar (and other) transporter A4U88_RS23285 PF07690 Major Facilitator Superfamily A4U88_RS23290 PF02611 CDP-diacylglycerol pyrophosphatase A4U88_RS23295 PF05170 A4U88_RS23295 A4U88_RS23300 PF00563 EAL domain A4U88_RS23305 PF00294 pfkB family carbohydrate kinase A4U88_RS23310 PF00196 Bacterial regulatory proteins, luxR family A4U88_RS23310 PF03472 Autoinducer binding domain A4U88_RS23315 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A4U88_RS23315 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain A4U88_RS23320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS23320 PF03466 LysR substrate binding domain A4U88_RS23325 PF09365 A4U88_RS23325 A4U88_RS23340 PF00291 Pyridoxal-phosphate dependent enzyme A4U88_RS23340 PF00585 C-terminal regulatory domain of Threonine dehydratase A4U88_RS23345 PF00920 Dehydratase family A4U88_RS23350 PF01063 Aminotransferase class IV A4U88_RS23355 PF13710 ACT domain A4U88_RS23360 PF00205 Thiamine pyrophosphate enzyme, central domain A4U88_RS23360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U88_RS23360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U88_RS23365 PF08046 A4U88_RS23365 A4U88_RS23370 PF07690 Major Facilitator Superfamily A4U88_RS23375 PF01078 Magnesium chelatase, subunit ChlI A4U88_RS23375 PF13335 A4U88_RS23375 A4U88_RS23375 PF13541 Subunit ChlI of Mg-chelatase A4U88_RS23380 PF04219 A4U88_RS23380 A4U88_RS23385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS23385 PF03466 LysR substrate binding domain A4U88_RS23425 PF01177 Asp/Glu/Hydantoin racemase A4U88_RS23430 PF00593 TonB dependent receptor A4U88_RS23430 PF07715 TonB-dependent Receptor Plug Domain A4U88_RS23435 PF05958 tRNA (Uracil-5-)-methyltransferase A4U88_RS23440 PF07226 A4U88_RS23440 A4U88_RS23445 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS23450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A4U88_RS23450 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U88_RS23455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U88_RS23455 PF03466 LysR substrate binding domain A4U88_RS23460 PF00462 Glutaredoxin A4U88_RS23460 PF08534 Redoxin A4U88_RS23470 PF05534 A4U88_RS23470 A4U88_RS23475 PF00206 Lyase A4U88_RS23475 PF14698 Argininosuccinate lyase C-terminal A4U88_RS23480 PF00764 Arginosuccinate synthase A4U88_RS23485 PF00696 Amino acid kinase family A4U88_RS23490 PF01118 Semialdehyde dehydrogenase, NAD binding domain A4U88_RS23490 PF02774 Semialdehyde dehydrogenase, dimerisation domain A4U88_RS23495 PF01546 Peptidase family M20/M25/M40 A4U88_RS23495 PF07687 Peptidase dimerisation domain A4U88_RS23500 PF00311 Phosphoenolpyruvate carboxylase A4U88_RS23505 PF02219 Methylenetetrahydrofolate reductase A4U88_RS23510 PF00696 Amino acid kinase family A4U88_RS23510 PF00742 Homoserine dehydrogenase A4U88_RS23510 PF03447 Homoserine dehydrogenase, NAD binding domain A4U88_RS23515 PF01053 Cys/Met metabolism PLP-dependent enzyme A4U88_RS23520 PF01340 Met Apo-repressor, MetJ A4U88_RS23525 PF01197 Ribosomal protein L31 A4U88_RS23530 PF00270 DEAD/DEAH box helicase A4U88_RS23530 PF00271 Helicase conserved C-terminal domain A4U88_RS23535 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS23535 PF13377 Periplasmic binding protein-like domain A4U88_RS23540 PF05036 Sporulation related domain A4U88_RS23545 PF00227 Proteasome subunit A4U88_RS23550 PF00004 ATPase family associated with various cellular activities (AAA) A4U88_RS23550 PF07724 AAA domain (Cdc48 subfamily) A4U88_RS23550 PF10431 C-terminal, D2-small domain, of ClpB protein A4U88_RS23555 PF01040 UbiA prenyltransferase family A4U88_RS23560 PF03737 Demethylmenaquinone methyltransferase A4U88_RS23565 PF06005 Protein of unknown function (DUF904) A4U88_RS23570 PF00230 Major intrinsic protein A4U88_RS23575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A4U88_RS23575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A4U88_RS23580 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A4U88_RS23585 PF07690 Major Facilitator Superfamily A4U88_RS23590 PF08279 HTH domain A4U88_RS23600 PF05656 A4U88_RS23600 A4U88_RS23605 PF07305 A4U88_RS23605 A4U88_RS23610 PF00121 Triosephosphate isomerase A4U88_RS23615 PF13531 Bacterial extracellular solute-binding protein A4U88_RS23620 PF00365 Phosphofructokinase A4U88_RS23625 PF01545 Cation efflux family A4U88_RS23625 PF16916 A4U88_RS23625 A4U88_RS23630 PF07813 LTXXQ motif family protein A4U88_RS23635 PF00072 Response regulator receiver domain A4U88_RS23635 PF00486 Transcriptional regulatory protein, C terminal A4U88_RS23640 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS23640 PF00672 HAMP domain A4U88_RS23640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS23640 PF16527 A4U88_RS23640 A4U88_RS23645 PF00588 SpoU rRNA Methylase family A4U88_RS23650 PF05235 CHAD domain A4U88_RS23655 PF11769 A4U88_RS23655 A4U88_RS23660 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS23660 PF06426 Serine acetyltransferase, N-terminal A4U88_RS23665 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A4U88_RS23665 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A4U88_RS23670 PF02556 Preprotein translocase subunit SecB A4U88_RS23675 PF00462 Glutaredoxin A4U88_RS23680 PF00581 Rhodanese-like domain A4U88_RS23685 PF01676 Metalloenzyme superfamily A4U88_RS23685 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A4U88_RS23690 PF01551 Peptidase family M23 A4U88_RS23695 PF04748 Divergent polysaccharide deacetylase A4U88_RS23700 PF00107 Zinc-binding dehydrogenase A4U88_RS23700 PF08240 Alcohol dehydrogenase GroES-like domain A4U88_RS23705 PF00155 Aminotransferase class I and II A4U88_RS23710 PF01370 NAD dependent epimerase/dehydratase family A4U88_RS23715 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A4U88_RS23720 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A4U88_RS23725 PF00534 Glycosyl transferases group 1 A4U88_RS23725 PF13439 Glycosyltransferase Family 4 A4U88_RS23730 PF04932 A4U88_RS23730 A4U88_RS23735 PF00535 Glycosyl transferase family 2 A4U88_RS23740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A4U88_RS23750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A4U88_RS23755 PF00534 Glycosyl transferases group 1 A4U88_RS23755 PF13439 Glycosyltransferase Family 4 A4U88_RS23760 PF00534 Glycosyl transferases group 1 A4U88_RS23760 PF13439 Glycosyltransferase Family 4 A4U88_RS23765 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A4U88_RS23770 PF00534 Glycosyl transferases group 1 A4U88_RS23770 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A4U88_RS23775 PF00535 Glycosyl transferase family 2 A4U88_RS23780 PF01467 Cytidylyltransferase A4U88_RS23785 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A4U88_RS23785 PF06827 Zinc finger found in FPG and IleRS A4U88_RS23785 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A4U88_RS23790 PF00471 Ribosomal protein L33 A4U88_RS23795 PF00830 Ribosomal L28 family A4U88_RS23800 PF04002 RadC-like JAB domain A4U88_RS23805 PF02441 Flavoprotein A4U88_RS23805 PF04127 DNA / pantothenate metabolism flavoprotein A4U88_RS23810 PF00692 dUTPase A4U88_RS23815 PF00440 Bacterial regulatory proteins, tetR family A4U88_RS23820 PF00156 Phosphoribosyl transferase domain A4U88_RS23825 PF01138 3' exoribonuclease family, domain 1 A4U88_RS23825 PF03725 3' exoribonuclease family, domain 2 A4U88_RS23830 PF03755 A4U88_RS23830 A4U88_RS23830 PF08340 A4U88_RS23830 A4U88_RS23840 PF01773 Na+ dependent nucleoside transporter N-terminus A4U88_RS23840 PF07662 Na+ dependent nucleoside transporter C-terminus A4U88_RS23845 PF12098 A4U88_RS23845 A4U88_RS23850 PF03458 A4U88_RS23850 A4U88_RS23855 PF00625 Guanylate kinase A4U88_RS23860 PF01192 RNA polymerase Rpb6 A4U88_RS23865 PF02824 TGS domain A4U88_RS23865 PF04607 Region found in RelA / SpoT proteins A4U88_RS23865 PF13291 ACT domain A4U88_RS23865 PF13328 HD domain A4U88_RS23870 PF00588 SpoU rRNA Methylase family A4U88_RS23870 PF12105 SpoU, rRNA methylase, C-terminal A4U88_RS23885 PF00860 Permease family A4U88_RS23895 PF00583 Acetyltransferase (GNAT) family A4U88_RS23895 PF09500 Putative thioesterase (yiiD_Cterm) A4U88_RS23900 PF02580 D-Tyr-tRNA(Tyr) deacylase A4U88_RS23905 PF03631 A4U88_RS23905 A4U88_RS23910 PF13419 Haloacid dehalogenase-like hydrolase A4U88_RS23915 PF00009 Elongation factor Tu GTP binding domain A4U88_RS23915 PF00679 Elongation factor G C-terminus A4U88_RS23915 PF03144 Elongation factor Tu domain 2 A4U88_RS23920 PF00120 Glutamine synthetase, catalytic domain A4U88_RS23920 PF03951 Glutamine synthetase, beta-Grasp domain A4U88_RS23925 PF00512 His Kinase A (phospho-acceptor) domain A4U88_RS23925 PF00989 PAS fold A4U88_RS23925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U88_RS23930 PF00072 Response regulator receiver domain A4U88_RS23930 PF00158 Sigma-54 interaction domain A4U88_RS23930 PF02954 Bacterial regulatory protein, Fis family A4U88_RS23935 PF04055 Radical SAM superfamily A4U88_RS23935 PF06969 HemN C-terminal domain A4U88_RS23945 PF04220 A4U88_RS23945 A4U88_RS23955 PF01926 50S ribosome-binding GTPase A4U88_RS23960 PF00476 DNA polymerase family A A4U88_RS23960 PF01367 5'-3' exonuclease, C-terminal SAM fold A4U88_RS23960 PF01612 3'-5' exonuclease A4U88_RS23960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A4U88_RS23965 PF01553 Acyltransferase A4U88_RS23970 PF01323 DSBA-like thioredoxin domain A4U88_RS23975 PF01636 Phosphotransferase enzyme family A4U88_RS23980 PF06288 Protein of unknown function (DUF1040) A4U88_RS23985 PF12804 MobA-like NTP transferase domain A4U88_RS23990 PF03205 Molybdopterin guanine dinucleotide synthesis protein B A4U88_RS24015 PF00392 Bacterial regulatory proteins, gntR family A4U88_RS24015 PF07729 FCD domain A4U88_RS24020 PF07690 Major Facilitator Superfamily A4U88_RS24025 PF00356 Bacterial regulatory proteins, lacI family A4U88_RS24025 PF13377 Periplasmic binding protein-like domain A4U88_RS24030 PF00294 pfkB family carbohydrate kinase A4U88_RS24035 PF13407 Periplasmic binding protein domain A4U88_RS24040 PF02653 A4U88_RS24040 A4U88_RS24045 PF00005 ABC transporter A4U88_RS24050 PF05025 RbsD / FucU transport protein family A4U88_RS24055 PF02705 A4U88_RS24055 A4U88_RS24060 PF07728 AAA domain (dynein-related subfamily) A4U88_RS24060 PF12592 Protein of unknown function (DUF3763) A4U88_RS24070 PF03590 Aspartate-ammonia ligase A4U88_RS24075 PF01037 AsnC family A4U88_RS24075 PF13412 Winged helix-turn-helix DNA-binding A4U88_RS24080 PF00258 Flavodoxin A4U88_RS24085 PF01134 Glucose inhibited division protein A A4U88_RS24085 PF13932 GidA associated domain 3 A4U88_RS24090 PF02527 rRNA small subunit methyltransferase G A4U88_RS24095 PF03899 A4U88_RS24095 A4U88_RS24100 PF00119 ATP synthase A chain A4U88_RS24105 PF00137 ATP synthase subunit C A4U88_RS24110 PF00430 ATP synthase B/B' CF(0) A4U88_RS24115 PF00213 ATP synthase delta (OSCP) subunit A4U88_RS24120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4U88_RS24120 PF00306 ATP synthase alpha/beta chain, C terminal domain A4U88_RS24120 PF02874 ATP synthase alpha/beta family, beta-barrel domain A4U88_RS24125 PF00231 ATP synthase A4U88_RS24130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4U88_RS24130 PF02874 ATP synthase alpha/beta family, beta-barrel domain A4U88_RS24135 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A4U88_RS24135 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A4U88_RS24140 PF00132 Bacterial transferase hexapeptide (six repeats) A4U88_RS24140 PF12804 MobA-like NTP transferase domain A4U88_RS24145 PF01380 SIS domain A4U88_RS24145 PF13522 Glutamine amidotransferase domain A4U88_RS24150 PF12849 PBP superfamily domain A4U88_RS24155 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS24160 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS24165 PF00005 ABC transporter A4U88_RS24170 PF01895 PhoU domain A4U88_RS24175 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U88_RS24180 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS24185 PF00528 Binding-protein-dependent transport system inner membrane component A4U88_RS24190 PF13419 Haloacid dehalogenase-like hydrolase A4U88_RS24195 PF00293 NUDIX domain A4U88_RS24200 PF00860 Permease family A4U88_RS24210 PF03358 NADPH-dependent FMN reductase A4U88_RS24215 PF01648 4'-phosphopantetheinyl transferase superfamily A4U88_RS24220 PF00753 Metallo-beta-lactamase superfamily A4U88_RS24225 PF01926 50S ribosome-binding GTPase A4U88_RS24225 PF10396 GTP-binding protein TrmE N-terminus A4U88_RS24225 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE A4U88_RS24230 PF02096 60Kd inner membrane protein A4U88_RS24230 PF14849 YidC periplasmic domain A4U88_RS24235 PF01809 A4U88_RS24235 A4U88_RS24240 PF00825 Ribonuclease P A4U88_RS24245 PF00468 Ribosomal protein L34