A4U88_RS00005 SM00382 ATPases associated with a variety of cellular activities A4U88_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain A4U88_RS00010 SM00480 DNA polymerase III beta subunit A4U88_RS00020 SM00387 Histidine kinase-like ATPases A4U88_RS00020 SM00433 TopoisomeraseII A4U88_RS00080 SM00642 Alpha-amylase domain A4U88_RS00125 SM00869 Autotransporter beta-domain A4U88_RS00165 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS00185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4U88_RS00185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS00185 SM01358 A4U88_RS00185 A4U88_RS00195 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4U88_RS00270 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS00375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4U88_RS00380 SM00347 helix_turn_helix multiple antibiotic resistance protein A4U88_RS00395 SM00421 helix_turn_helix, Lux Regulon A4U88_RS00395 SM00448 cheY-homologous receiver domain A4U88_RS00425 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A4U88_RS00425 SM00636 A4U88_RS00425 A4U88_RS00445 SM00382 ATPases associated with a variety of cellular activities A4U88_RS00450 SM00382 ATPases associated with a variety of cellular activities A4U88_RS00500 SM00052 Putative diguanylate phosphodiesterase A4U88_RS00500 SM00267 diguanylate cyclase A4U88_RS00530 SM00487 DEAD-like helicases superfamily A4U88_RS00530 SM00490 helicase superfamily c-terminal domain A4U88_RS00540 SM00357 Cold shock protein domain A4U88_RS00540 SM00382 ATPases associated with a variety of cellular activities A4U88_RS00540 SM00959 Rho termination factor, N-terminal domain A4U88_RS00560 SM00984 UDP binding domain A4U88_RS00655 SM01219 A4U88_RS00655 A4U88_RS00720 SM00341 Helicase and RNase D C-terminal A4U88_RS00720 SM00487 DEAD-like helicases superfamily A4U88_RS00720 SM00490 helicase superfamily c-terminal domain A4U88_RS00720 SM00956 A4U88_RS00720 A4U88_RS00800 SM00235 Zinc-dependent metalloprotease A4U88_RS00830 SM00382 ATPases associated with a variety of cellular activities A4U88_RS00830 SM00962 SRP54-type protein, GTPase domain A4U88_RS00830 SM00963 SRP54-type protein, helical bundle domain A4U88_RS00835 SM00382 ATPases associated with a variety of cellular activities A4U88_RS00880 SM00382 ATPases associated with a variety of cellular activities A4U88_RS00885 SM00382 ATPases associated with a variety of cellular activities A4U88_RS00910 SM00382 ATPases associated with a variety of cellular activities A4U88_RS01010 SM01004 Delta-aminolevulinic acid dehydratase A4U88_RS01015 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A4U88_RS01015 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4U88_RS01145 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A4U88_RS01145 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4U88_RS01150 SM00649 Ribosomal protein L11/L12 A4U88_RS01175 SM00663 RNA polymerase I subunit A N-terminus A4U88_RS01190 SM00387 Histidine kinase-like ATPases A4U88_RS01200 SM00876 Biotin and Thiamin Synthesis associated domain A4U88_RS01255 SM00411 bacterial (prokaryotic) histone like domain A4U88_RS01265 SM01209 A4U88_RS01265 A4U88_RS01265 SM01210 A4U88_RS01265 A4U88_RS01270 SM00798 AICARFT/IMPCHase bienzyme A4U88_RS01270 SM00851 MGS-like domain A4U88_RS01345 SM00823 Phosphopantetheine attachment site A4U88_RS01365 SM00923 MbtH-like protein A4U88_RS01370 SM00823 Phosphopantetheine attachment site A4U88_RS01370 SM00824 Thioesterase A4U88_RS01405 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS01415 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS01465 SM00421 helix_turn_helix, Lux Regulon A4U88_RS01520 SM00883 Chaperonin 10 Kd subunit A4U88_RS01530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4U88_RS01530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS01545 SM00841 Elongation factor P, C-terminal A4U88_RS01545 SM01185 A4U88_RS01545 A4U88_RS01610 SM00479 A4U88_RS01610 A4U88_RS01645 SM00257 Lysin motif A4U88_RS01645 SM00646 A4U88_RS01645 A4U88_RS01650 SM00853 MutL C terminal dimerisation domain A4U88_RS01650 SM01340 A4U88_RS01650 A4U88_RS01670 SM00244 prohibitin homologues A4U88_RS01675 SM00244 prohibitin homologues A4U88_RS01685 SM00788 Adenylosuccinate synthetase A4U88_RS01695 SM00316 Ribosomal protein S1-like RNA-binding domain A4U88_RS01695 SM00357 Cold shock protein domain A4U88_RS01695 SM00955 A4U88_RS01695 A4U88_RS01700 SM00967 RNA 2'-O ribose methyltransferase substrate binding A4U88_RS01795 SM00116 Domain in cystathionine beta-synthase and other proteins. A4U88_RS01795 SM01091 Transporter associated domain A4U88_RS01825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4U88_RS01825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS01895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS01895 SM00387 Histidine kinase-like ATPases A4U88_RS01895 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS01900 SM00448 cheY-homologous receiver domain A4U88_RS01900 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS01915 SM01103 A4U88_RS01915 A4U88_RS01925 SM00382 ATPases associated with a variety of cellular activities A4U88_RS01980 SM01387 A4U88_RS01980 A4U88_RS01985 SM00316 Ribosomal protein S1-like RNA-binding domain A4U88_RS01985 SM00322 K homology RNA-binding domain A4U88_RS01990 SM00028 Tetratricopeptide repeats A4U88_RS01995 SM00487 DEAD-like helicases superfamily A4U88_RS01995 SM00490 helicase superfamily c-terminal domain A4U88_RS02080 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4U88_RS02095 SM00072 Guanylate kinase homologues. A4U88_RS02105 SM00382 ATPases associated with a variety of cellular activities A4U88_RS02110 SM00382 ATPases associated with a variety of cellular activities A4U88_RS02135 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS02135 SM00866 A4U88_RS02135 A4U88_RS02180 SM00642 Alpha-amylase domain A4U88_RS02190 SM00354 helix_turn _helix lactose operon repressor A4U88_RS02195 SM00831 Cation transporter/ATPase, N-terminus A4U88_RS02210 SM00460 Transglutaminase/protease-like homologues A4U88_RS02295 SM00421 helix_turn_helix, Lux Regulon A4U88_RS02340 SM00507 HNH nucleases A4U88_RS02365 SM00354 helix_turn _helix lactose operon repressor A4U88_RS02395 SM00833 Cobalamin synthesis protein cobW C-terminal domain A4U88_RS02435 SM00382 ATPases associated with a variety of cellular activities A4U88_RS02455 SM01230 A4U88_RS02455 A4U88_RS02480 SM00882 Coenzyme A transferase A4U88_RS02515 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS02525 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS02525 SM00871 Bacterial transcription activator, effector binding domain A4U88_RS02565 SM00155 Phospholipase D. Active site motifs. A4U88_RS02600 SM00421 helix_turn_helix, Lux Regulon A4U88_RS02630 SM00421 helix_turn_helix, Lux Regulon A4U88_RS02640 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS02655 SM00822 A4U88_RS02655 A4U88_RS02665 SM00822 A4U88_RS02665 A4U88_RS02670 SM00347 helix_turn_helix multiple antibiotic resistance protein A4U88_RS02715 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS02725 SM00903 Flavin reductase like domain A4U88_RS02735 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS02735 SM00895 A4U88_RS02735 A4U88_RS02750 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A4U88_RS02795 SM00267 diguanylate cyclase A4U88_RS02850 SM00749 bacterial OsmY and nodulation domain A4U88_RS02880 SM01133 A4U88_RS02880 A4U88_RS02885 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A4U88_RS02920 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS02930 SM00829 Enoylreductase A4U88_RS02940 SM00382 ATPases associated with a variety of cellular activities A4U88_RS02950 SM00267 diguanylate cyclase A4U88_RS02975 SM00855 Phosphoglycerate mutase family A4U88_RS02980 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS02980 SM00871 Bacterial transcription activator, effector binding domain A4U88_RS02990 SM00448 cheY-homologous receiver domain A4U88_RS02990 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS03035 SM00852 Probable molybdopterin binding domain A4U88_RS03055 SM00271 DnaJ molecular chaperone homology domain A4U88_RS03075 SM00904 Riboflavin kinase A4U88_RS03125 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A4U88_RS03130 SM00851 MGS-like domain A4U88_RS03130 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4U88_RS03180 SM00650 Ribosomal RNA adenine dimethylases A4U88_RS03200 SM00271 DnaJ molecular chaperone homology domain A4U88_RS03215 SM00486 DNA polymerase type-B family A4U88_RS03235 SM00382 ATPases associated with a variety of cellular activities A4U88_RS03275 SM01329 A4U88_RS03275 A4U88_RS03280 SM00917 LeuA allosteric (dimerisation) domain A4U88_RS03305 SM00354 helix_turn _helix lactose operon repressor A4U88_RS03385 SM00842 Cell division protein FtsA A4U88_RS03390 SM00864 Tubulin/FtsZ family, GTPase domain A4U88_RS03390 SM00865 Tubulin/FtsZ family, C-terminal domain A4U88_RS03410 SM00957 SecA DEAD-like domain A4U88_RS03410 SM00958 SecA preprotein cross-linking domain A4U88_RS03435 SM01240 A4U88_RS03435 A4U88_RS03445 SM00382 ATPases associated with a variety of cellular activities A4U88_RS03460 SM00644 A4U88_RS03460 A4U88_RS03500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4U88_RS03505 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4U88_RS03510 SM00073 Histidine Phosphotransfer domain A4U88_RS03510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS03510 SM00387 Histidine kinase-like ATPases A4U88_RS03510 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS03510 SM00448 cheY-homologous receiver domain A4U88_RS03520 SM00954 Region found in RelA / SpoT proteins A4U88_RS03535 SM01192 A4U88_RS03535 A4U88_RS03535 SM01193 A4U88_RS03535 A4U88_RS03630 SM00382 ATPases associated with a variety of cellular activities A4U88_RS03640 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS03640 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4U88_RS03675 SM00257 Lysin motif A4U88_RS03685 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A4U88_RS03685 SM00534 ATPase domain of DNA mismatch repair MUTS family A4U88_RS03700 SM00822 A4U88_RS03700 A4U88_RS03725 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS03745 SM00382 ATPases associated with a variety of cellular activities A4U88_RS03815 SM01091 Transporter associated domain A4U88_RS03825 SM00382 ATPases associated with a variety of cellular activities A4U88_RS03825 SM00962 SRP54-type protein, GTPase domain A4U88_RS03825 SM00963 SRP54-type protein, helical bundle domain A4U88_RS03875 SM00830 Chorismate mutase type II A4U88_RS03880 SM00830 Chorismate mutase type II A4U88_RS03900 SM00363 S4 RNA-binding domain A4U88_RS03910 SM00382 ATPases associated with a variety of cellular activities A4U88_RS03910 SM01086 C-terminal, D2-small domain, of ClpB protein A4U88_RS03965 SM00257 Lysin motif A4U88_RS03970 SM00849 Metallo-beta-lactamase superfamily A4U88_RS03985 SM00479 A4U88_RS03985 A4U88_RS04030 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS04045 SM00382 ATPases associated with a variety of cellular activities A4U88_RS04070 SM01007 Class II Aldolase and Adducin N-terminal domain A4U88_RS04130 SM00900 A4U88_RS04130 A4U88_RS04200 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4U88_RS04210 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS04230 SM00479 A4U88_RS04230 A4U88_RS04255 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS04310 SM00421 helix_turn_helix, Lux Regulon A4U88_RS04335 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS04340 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS04440 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS04455 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS04555 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS04620 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS04645 SM00965 Secretin and TonB N terminus short domain A4U88_RS04655 SM00382 ATPases associated with a variety of cellular activities A4U88_RS04670 SM00346 helix_turn_helix isocitrate lyase regulation A4U88_RS04715 SM01061 CAT RNA binding domain A4U88_RS04730 SM00448 cheY-homologous receiver domain A4U88_RS04730 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS04735 SM00091 PAS domain A4U88_RS04735 SM00387 Histidine kinase-like ATPases A4U88_RS04735 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS04765 SM00642 Alpha-amylase domain A4U88_RS04795 SM01323 A4U88_RS04795 A4U88_RS04850 SM00861 Transketolase, pyrimidine binding domain A4U88_RS04865 SM00981 A4U88_RS04865 A4U88_RS04870 SM00912 haemagglutination activity domain A4U88_RS04955 SM00382 ATPases associated with a variety of cellular activities A4U88_RS04955 SM00994 ClpX C4-type zinc finger A4U88_RS04955 SM01086 C-terminal, D2-small domain, of ClpB protein A4U88_RS04965 SM00411 bacterial (prokaryotic) histone like domain A4U88_RS05005 SM00344 helix_turn_helix ASNC type A4U88_RS05010 SM00382 ATPases associated with a variety of cellular activities A4U88_RS05015 SM00382 ATPases associated with a variety of cellular activities A4U88_RS05020 SM00938 Nitrogen regulatory protein P-II A4U88_RS05050 SM00354 helix_turn _helix lactose operon repressor A4U88_RS05100 SM00382 ATPases associated with a variety of cellular activities A4U88_RS05170 SM00382 ATPases associated with a variety of cellular activities A4U88_RS05180 SM00493 A4U88_RS05180 A4U88_RS05185 SM00387 Histidine kinase-like ATPases A4U88_RS05240 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS05265 SM00823 Phosphopantetheine attachment site A4U88_RS05320 SM00825 Beta-ketoacyl synthase A4U88_RS05370 SM00422 helix_turn_helix, mercury resistance A4U88_RS05405 SM00382 ATPases associated with a variety of cellular activities A4U88_RS05425 SM01001 AIR carboxylase A4U88_RS05440 SM00840 A4U88_RS05440 A4U88_RS05475 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS05510 SM00267 diguanylate cyclase A4U88_RS05515 SM00357 Cold shock protein domain A4U88_RS05525 SM00382 ATPases associated with a variety of cellular activities A4U88_RS05540 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS05555 SM00357 Cold shock protein domain A4U88_RS05580 SM00267 diguanylate cyclase A4U88_RS05590 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS05605 SM00936 Penicillin-binding protein 5, C-terminal domain A4U88_RS05670 SM00382 ATPases associated with a variety of cellular activities A4U88_RS05695 SM00116 Domain in cystathionine beta-synthase and other proteins. A4U88_RS05695 SM01091 Transporter associated domain A4U88_RS05715 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS05765 SM00060 Fibronectin type 3 domain A4U88_RS05765 SM00495 Chitin-binding domain type 3 A4U88_RS05810 SM01081 Putative carbohydrate binding domain A4U88_RS05855 SM00448 cheY-homologous receiver domain A4U88_RS05855 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS05860 SM00387 Histidine kinase-like ATPases A4U88_RS05860 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS05910 SM00796 Allophanate hydrolase subunit 1 A4U88_RS05915 SM00797 Allophanate hydrolase subunit 2 A4U88_RS05940 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A4U88_RS05940 SM01232 A4U88_RS05940 A4U88_RS05970 SM00861 Transketolase, pyrimidine binding domain A4U88_RS05985 SM00881 CoA binding domain A4U88_RS06110 SM00421 helix_turn_helix, Lux Regulon A4U88_RS06110 SM00448 cheY-homologous receiver domain A4U88_RS06130 SM00855 Phosphoglycerate mutase family A4U88_RS06165 SM00382 ATPases associated with a variety of cellular activities A4U88_RS06195 SM00382 ATPases associated with a variety of cellular activities A4U88_RS06215 SM00382 ATPases associated with a variety of cellular activities A4U88_RS06260 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS06260 SM00876 Biotin and Thiamin Synthesis associated domain A4U88_RS06280 SM00382 ATPases associated with a variety of cellular activities A4U88_RS06285 SM00487 DEAD-like helicases superfamily A4U88_RS06285 SM00490 helicase superfamily c-terminal domain A4U88_RS06300 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS06305 SM00852 Probable molybdopterin binding domain A4U88_RS06340 SM00382 ATPases associated with a variety of cellular activities A4U88_RS06355 SM00487 DEAD-like helicases superfamily A4U88_RS06355 SM00490 helicase superfamily c-terminal domain A4U88_RS06375 SM00382 ATPases associated with a variety of cellular activities A4U88_RS06395 SM00387 Histidine kinase-like ATPases A4U88_RS06400 SM00421 helix_turn_helix, Lux Regulon A4U88_RS06400 SM00448 cheY-homologous receiver domain A4U88_RS06410 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4U88_RS06470 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS06475 SM00996 S-adenosyl-L-homocysteine hydrolase A4U88_RS06475 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A4U88_RS06510 SM00422 helix_turn_helix, mercury resistance A4U88_RS06550 SM00382 ATPases associated with a variety of cellular activities A4U88_RS06585 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS06630 SM00347 helix_turn_helix multiple antibiotic resistance protein A4U88_RS06645 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A4U88_RS06660 SM00507 HNH nucleases A4U88_RS06695 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS06705 SM00090 RIO-like kinase A4U88_RS06710 SM00642 Alpha-amylase domain A4U88_RS06755 SM00382 ATPases associated with a variety of cellular activities A4U88_RS06755 SM00930 A4U88_RS06755 A4U88_RS06790 SM00382 ATPases associated with a variety of cellular activities A4U88_RS06820 SM00710 Parallel beta-helix repeats A4U88_RS06835 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS06835 SM00895 A4U88_RS06835 A4U88_RS06860 SM00382 ATPases associated with a variety of cellular activities A4U88_RS06910 SM00450 Rhodanese Homology Domain A4U88_RS06925 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS06930 SM00822 A4U88_RS06930 A4U88_RS06935 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS07000 SM00382 ATPases associated with a variety of cellular activities A4U88_RS07045 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS07085 SM00487 DEAD-like helicases superfamily A4U88_RS07085 SM00488 A4U88_RS07085 A4U88_RS07085 SM00491 A4U88_RS07085 A4U88_RS07090 SM00344 helix_turn_helix ASNC type A4U88_RS07100 SM00382 ATPases associated with a variety of cellular activities A4U88_RS07125 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS07150 SM00947 Carbonic anhydrase A4U88_RS07160 SM00903 Flavin reductase like domain A4U88_RS07175 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4U88_RS07175 SM00091 PAS domain A4U88_RS07175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4U88_RS07200 SM00382 ATPases associated with a variety of cellular activities A4U88_RS07210 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS07210 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4U88_RS07270 SM01007 Class II Aldolase and Adducin N-terminal domain A4U88_RS07285 SM00420 helix_turn_helix, Deoxyribose operon repressor A4U88_RS07285 SM01134 A4U88_RS07285 A4U88_RS07310 SM00448 cheY-homologous receiver domain A4U88_RS07310 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS07315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS07315 SM00387 Histidine kinase-like ATPases A4U88_RS07315 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS07320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS07320 SM00387 Histidine kinase-like ATPases A4U88_RS07320 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS07325 SM00448 cheY-homologous receiver domain A4U88_RS07325 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS07375 SM00421 helix_turn_helix, Lux Regulon A4U88_RS07380 SM00052 Putative diguanylate phosphodiesterase A4U88_RS07405 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS07415 SM00098 Alkaline phosphatase homologues A4U88_RS07425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4U88_RS07455 SM01116 A4U88_RS07455 A4U88_RS07460 SM00947 Carbonic anhydrase A4U88_RS07480 SM00382 ATPases associated with a variety of cellular activities A4U88_RS07490 SM00852 Probable molybdopterin binding domain A4U88_RS07505 SM00382 ATPases associated with a variety of cellular activities A4U88_RS07540 SM00829 Enoylreductase A4U88_RS07565 SM00354 helix_turn _helix lactose operon repressor A4U88_RS07575 SM00382 ATPases associated with a variety of cellular activities A4U88_RS07590 SM00919 Malic enzyme, NAD binding domain A4U88_RS07590 SM01274 A4U88_RS07590 A4U88_RS07630 SM00014 Acid phosphatase homologues A4U88_RS07655 SM00116 Domain in cystathionine beta-synthase and other proteins. A4U88_RS07655 SM01091 Transporter associated domain A4U88_RS07675 SM00226 Low molecular weight phosphatase family A4U88_RS07810 SM01350 A4U88_RS07810 A4U88_RS07915 SM00116 Domain in cystathionine beta-synthase and other proteins. A4U88_RS07920 SM00936 Penicillin-binding protein 5, C-terminal domain A4U88_RS07980 SM00421 helix_turn_helix, Lux Regulon A4U88_RS07995 SM00420 helix_turn_helix, Deoxyribose operon repressor A4U88_RS07995 SM01134 A4U88_RS07995 A4U88_RS08000 SM01133 A4U88_RS08000 A4U88_RS08010 SM00014 Acid phosphatase homologues A4U88_RS08065 SM00382 ATPases associated with a variety of cellular activities A4U88_RS08100 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS08100 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4U88_RS08115 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS08115 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4U88_RS08120 SM00382 ATPases associated with a variety of cellular activities A4U88_RS08135 SM00644 A4U88_RS08135 A4U88_RS08200 SM00357 Cold shock protein domain A4U88_RS08210 SM00382 ATPases associated with a variety of cellular activities A4U88_RS08210 SM01086 C-terminal, D2-small domain, of ClpB protein A4U88_RS08215 SM00316 Ribosomal protein S1-like RNA-binding domain A4U88_RS08225 SM00382 ATPases associated with a variety of cellular activities A4U88_RS08230 SM00382 ATPases associated with a variety of cellular activities A4U88_RS08250 SM00344 helix_turn_helix ASNC type A4U88_RS08255 SM00843 A4U88_RS08255 A4U88_RS08265 SM00382 ATPases associated with a variety of cellular activities A4U88_RS08305 SM00870 A4U88_RS08305 A4U88_RS08325 SM00316 Ribosomal protein S1-like RNA-binding domain A4U88_RS08335 SM00849 Metallo-beta-lactamase superfamily A4U88_RS08340 SM00382 ATPases associated with a variety of cellular activities A4U88_RS08350 SM01150 A4U88_RS08350 A4U88_RS08355 SM00357 Cold shock protein domain A4U88_RS08360 SM00357 Cold shock protein domain A4U88_RS08420 SM00849 Metallo-beta-lactamase superfamily A4U88_RS08455 SM00382 ATPases associated with a variety of cellular activities A4U88_RS08470 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS08495 SM00981 A4U88_RS08495 A4U88_RS08500 SM00382 ATPases associated with a variety of cellular activities A4U88_RS08530 SM00825 Beta-ketoacyl synthase A4U88_RS08585 SM00851 MGS-like domain A4U88_RS08595 SM00881 CoA binding domain A4U88_RS08600 SM00992 Hemimethylated DNA-binding protein YccV like A4U88_RS08605 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4U88_RS08640 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS08685 SM00422 helix_turn_helix, mercury resistance A4U88_RS08705 SM00477 DNA/RNA non-specific endonuclease A4U88_RS08705 SM00892 DNA/RNA non-specific endonuclease A4U88_RS08735 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS08810 SM00421 helix_turn_helix, Lux Regulon A4U88_RS08840 SM01130 A4U88_RS08840 A4U88_RS08845 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS08890 SM00421 helix_turn_helix, Lux Regulon A4U88_RS08890 SM00448 cheY-homologous receiver domain A4U88_RS08895 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4U88_RS08895 SM00465 GIY-YIG type nucleases (URI domain) A4U88_RS08975 SM00382 ATPases associated with a variety of cellular activities A4U88_RS08985 SM00465 GIY-YIG type nucleases (URI domain) A4U88_RS09045 SM00917 LeuA allosteric (dimerisation) domain A4U88_RS09050 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS09055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4U88_RS09100 SM00450 Rhodanese Homology Domain A4U88_RS09105 SM00867 YceI-like domain A4U88_RS09120 SM00829 Enoylreductase A4U88_RS09130 SM00421 helix_turn_helix, Lux Regulon A4U88_RS09165 SM00316 Ribosomal protein S1-like RNA-binding domain A4U88_RS09200 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A4U88_RS09205 SM00822 A4U88_RS09205 A4U88_RS09215 SM00825 Beta-ketoacyl synthase A4U88_RS09255 SM00529 Helix-turn-helix diphteria tox regulatory element A4U88_RS09265 SM00822 A4U88_RS09265 A4U88_RS09275 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS09335 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS09375 SM00481 DNA polymerase alpha chain like domain A4U88_RS09395 SM00479 A4U88_RS09395 A4U88_RS09500 SM00448 cheY-homologous receiver domain A4U88_RS09505 SM00387 Histidine kinase-like ATPases A4U88_RS09510 SM01133 A4U88_RS09510 A4U88_RS09520 SM00382 ATPases associated with a variety of cellular activities A4U88_RS09555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4U88_RS09650 SM00421 helix_turn_helix, Lux Regulon A4U88_RS09690 SM01400 A4U88_RS09690 A4U88_RS09710 SM00937 A4U88_RS09710 A4U88_RS09745 SM00267 diguanylate cyclase A4U88_RS09750 SM00487 DEAD-like helicases superfamily A4U88_RS09750 SM00490 helicase superfamily c-terminal domain A4U88_RS09750 SM00982 A4U88_RS09750 A4U88_RS09750 SM01058 CarD-like/TRCF domain A4U88_RS09765 SM00382 ATPases associated with a variety of cellular activities A4U88_RS09815 SM00382 ATPases associated with a variety of cellular activities A4U88_RS09830 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS09850 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A4U88_RS09855 SM00387 Histidine kinase-like ATPases A4U88_RS09855 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS09860 SM00448 cheY-homologous receiver domain A4U88_RS09860 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS09870 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS09870 SM00866 A4U88_RS09870 A4U88_RS09925 SM01329 A4U88_RS09925 A4U88_RS10005 SM00354 helix_turn _helix lactose operon repressor A4U88_RS10065 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS10115 SM00830 Chorismate mutase type II A4U88_RS10135 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS10135 SM00866 A4U88_RS10135 A4U88_RS10150 SM00354 helix_turn _helix lactose operon repressor A4U88_RS10195 SM00829 Enoylreductase A4U88_RS10225 SM01022 A4U88_RS10225 A4U88_RS10240 SM00972 Spore Coat Protein U domain A4U88_RS10255 SM00972 Spore Coat Protein U domain A4U88_RS10260 SM00972 Spore Coat Protein U domain A4U88_RS10285 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A4U88_RS10290 SM00945 ProQ/FINO family A4U88_RS10295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4U88_RS10295 SM00245 tail specific protease A4U88_RS10315 SM00382 ATPases associated with a variety of cellular activities A4U88_RS10345 SM00346 helix_turn_helix isocitrate lyase regulation A4U88_RS10370 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS10370 SM00866 A4U88_RS10370 A4U88_RS10425 SM00382 ATPases associated with a variety of cellular activities A4U88_RS10505 SM00873 B3/4 domain A4U88_RS10505 SM00874 tRNA synthetase B5 domain A4U88_RS10505 SM00896 Ferredoxin-fold anticodon binding domain A4U88_RS10510 SM00411 bacterial (prokaryotic) histone like domain A4U88_RS10530 SM00382 ATPases associated with a variety of cellular activities A4U88_RS10590 SM00382 ATPases associated with a variety of cellular activities A4U88_RS10680 SM00382 ATPases associated with a variety of cellular activities A4U88_RS10770 SM00354 helix_turn _helix lactose operon repressor A4U88_RS10790 SM00479 A4U88_RS10790 A4U88_RS10860 SM00347 helix_turn_helix multiple antibiotic resistance protein A4U88_RS10885 SM00363 S4 RNA-binding domain A4U88_RS10905 SM01130 A4U88_RS10905 A4U88_RS10915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4U88_RS10955 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS10975 SM00478 endonuclease III A4U88_RS10975 SM00525 A4U88_RS10975 A4U88_RS10985 SM00900 A4U88_RS10985 A4U88_RS11040 SM00420 helix_turn_helix, Deoxyribose operon repressor A4U88_RS11040 SM01134 A4U88_RS11040 A4U88_RS11065 SM00354 helix_turn _helix lactose operon repressor A4U88_RS11170 SM00422 helix_turn_helix, mercury resistance A4U88_RS11180 SM00116 Domain in cystathionine beta-synthase and other proteins. A4U88_RS11180 SM00382 ATPases associated with a variety of cellular activities A4U88_RS11230 SM00965 Secretin and TonB N terminus short domain A4U88_RS11270 SM00823 Phosphopantetheine attachment site A4U88_RS11275 SM00823 Phosphopantetheine attachment site A4U88_RS11340 SM00347 helix_turn_helix multiple antibiotic resistance protein A4U88_RS11375 SM00382 ATPases associated with a variety of cellular activities A4U88_RS11405 SM00835 Cupin A4U88_RS11495 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS11530 SM00347 helix_turn_helix multiple antibiotic resistance protein A4U88_RS11585 SM00382 ATPases associated with a variety of cellular activities A4U88_RS11595 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS11630 SM00420 helix_turn_helix, Deoxyribose operon repressor A4U88_RS11630 SM01134 A4U88_RS11630 A4U88_RS11700 SM00849 Metallo-beta-lactamase superfamily A4U88_RS11705 SM00829 Enoylreductase A4U88_RS11715 SM00382 ATPases associated with a variety of cellular activities A4U88_RS11720 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS11745 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS11760 SM00052 Putative diguanylate phosphodiesterase A4U88_RS11760 SM00267 diguanylate cyclase A4U88_RS11765 SM00235 Zinc-dependent metalloprotease A4U88_RS11780 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS11830 SM00422 helix_turn_helix, mercury resistance A4U88_RS11835 SM01192 A4U88_RS11835 A4U88_RS11835 SM01193 A4U88_RS11835 A4U88_RS11845 SM01131 A4U88_RS11845 A4U88_RS11850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A4U88_RS11850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4U88_RS11850 SM00091 PAS domain A4U88_RS11850 SM00267 diguanylate cyclase A4U88_RS11885 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS11890 SM00155 Phospholipase D. Active site motifs. A4U88_RS11910 SM00354 helix_turn _helix lactose operon repressor A4U88_RS11990 SM00923 MbtH-like protein A4U88_RS12015 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4U88_RS12020 SM00248 ankyrin repeats A4U88_RS12050 SM00422 helix_turn_helix, mercury resistance A4U88_RS12090 SM00346 helix_turn_helix isocitrate lyase regulation A4U88_RS12125 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS12145 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A4U88_RS12165 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS12200 SM00267 diguanylate cyclase A4U88_RS12220 SM00382 ATPases associated with a variety of cellular activities A4U88_RS12260 SM00382 ATPases associated with a variety of cellular activities A4U88_RS12275 SM00838 Elongation factor G C-terminus A4U88_RS12275 SM00889 Elongation factor G, domain IV A4U88_RS12285 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS12340 SM00382 ATPases associated with a variety of cellular activities A4U88_RS12345 SM00382 ATPases associated with a variety of cellular activities A4U88_RS12365 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4U88_RS12405 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS12460 SM00382 ATPases associated with a variety of cellular activities A4U88_RS12475 SM00420 helix_turn_helix, Deoxyribose operon repressor A4U88_RS12475 SM01134 A4U88_RS12475 A4U88_RS12500 SM00100 Cyclic nucleotide-monophosphate binding domain A4U88_RS12500 SM00419 helix_turn_helix, cAMP Regulatory protein A4U88_RS12515 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A4U88_RS12515 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A4U88_RS12550 SM00448 cheY-homologous receiver domain A4U88_RS12550 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS12575 SM00020 Trypsin-like serine protease A4U88_RS12580 SM00382 ATPases associated with a variety of cellular activities A4U88_RS12580 SM00487 DEAD-like helicases superfamily A4U88_RS12580 SM00490 helicase superfamily c-terminal domain A4U88_RS12580 SM00847 Helicase associated domain (HA2) Add an annotation A4U88_RS12625 SM00890 Domain of unknown function A4U88_RS12675 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A4U88_RS12685 SM00091 PAS domain A4U88_RS12685 SM00382 ATPases associated with a variety of cellular activities A4U88_RS12720 SM00382 ATPases associated with a variety of cellular activities A4U88_RS12730 SM00833 Cobalamin synthesis protein cobW C-terminal domain A4U88_RS12760 SM00382 ATPases associated with a variety of cellular activities A4U88_RS12765 SM00382 ATPases associated with a variety of cellular activities A4U88_RS12785 SM00936 Penicillin-binding protein 5, C-terminal domain A4U88_RS12805 SM00357 Cold shock protein domain A4U88_RS12805 SM00955 A4U88_RS12805 A4U88_RS12840 SM00420 helix_turn_helix, Deoxyribose operon repressor A4U88_RS12840 SM01134 A4U88_RS12840 A4U88_RS12855 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A4U88_RS12870 SM00028 Tetratricopeptide repeats A4U88_RS12880 SM00822 A4U88_RS12880 A4U88_RS12910 SM00822 A4U88_RS12910 A4U88_RS12915 SM00861 Transketolase, pyrimidine binding domain A4U88_RS12930 SM00014 Acid phosphatase homologues A4U88_RS12960 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A4U88_RS12960 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A4U88_RS12960 SM00493 A4U88_RS12960 A4U88_RS12975 SM00822 A4U88_RS12975 A4U88_RS12985 SM00363 S4 RNA-binding domain A4U88_RS13005 SM00481 DNA polymerase alpha chain like domain A4U88_RS13040 SM00749 bacterial OsmY and nodulation domain A4U88_RS13100 SM00354 helix_turn _helix lactose operon repressor A4U88_RS13120 SM00382 ATPases associated with a variety of cellular activities A4U88_RS13160 SM00155 Phospholipase D. Active site motifs. A4U88_RS13170 SM00382 ATPases associated with a variety of cellular activities A4U88_RS13175 SM00382 ATPases associated with a variety of cellular activities A4U88_RS13215 SM00528 Domain in histone-like proteins of HNS family A4U88_RS13225 SM00984 UDP binding domain A4U88_RS13235 SM00448 cheY-homologous receiver domain A4U88_RS13295 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A4U88_RS13295 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A4U88_RS13295 SM00493 A4U88_RS13295 A4U88_RS13300 SM00450 Rhodanese Homology Domain A4U88_RS13320 SM00870 A4U88_RS13320 A4U88_RS13350 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4U88_RS13365 SM00763 PrkA AAA domain A4U88_RS13415 SM01005 Alanine racemase, C-terminal domain A4U88_RS13440 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS13495 SM00341 Helicase and RNase D C-terminal A4U88_RS13495 SM00474 3'-5' exonuclease A4U88_RS13515 SM00487 DEAD-like helicases superfamily A4U88_RS13515 SM00491 A4U88_RS13515 A4U88_RS13555 SM00364 Leucine-rich repeats, bacterial type A4U88_RS13555 SM00369 Leucine-rich repeats, typical (most populated) subfamily A4U88_RS13565 SM00257 Lysin motif A4U88_RS13575 SM00382 ATPases associated with a variety of cellular activities A4U88_RS13585 SM00382 ATPases associated with a variety of cellular activities A4U88_RS13590 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4U88_RS13615 SM00834 Putative regulatory protein A4U88_RS13675 SM00836 DALR anticodon binding domain A4U88_RS13675 SM01016 Arginyl tRNA synthetase N terminal dom A4U88_RS13730 SM01022 A4U88_RS13730 A4U88_RS13740 SM00487 DEAD-like helicases superfamily A4U88_RS13740 SM00490 helicase superfamily c-terminal domain A4U88_RS13745 SM00357 Cold shock protein domain A4U88_RS13780 SM00052 Putative diguanylate phosphodiesterase A4U88_RS13785 SM01091 Transporter associated domain A4U88_RS13825 SM00357 Cold shock protein domain A4U88_RS13835 SM00849 Metallo-beta-lactamase superfamily A4U88_RS13890 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS13910 SM00257 Lysin motif A4U88_RS13910 SM00749 bacterial OsmY and nodulation domain A4U88_RS13960 SM00382 ATPases associated with a variety of cellular activities A4U88_RS13965 SM00382 ATPases associated with a variety of cellular activities A4U88_RS13985 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS14040 SM00849 Metallo-beta-lactamase superfamily A4U88_RS14070 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4U88_RS14130 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS14140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS14140 SM00387 Histidine kinase-like ATPases A4U88_RS14145 SM00421 helix_turn_helix, Lux Regulon A4U88_RS14145 SM00448 cheY-homologous receiver domain A4U88_RS14170 SM00382 ATPases associated with a variety of cellular activities A4U88_RS14175 SM00382 ATPases associated with a variety of cellular activities A4U88_RS14265 SM00382 ATPases associated with a variety of cellular activities A4U88_RS14275 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS14275 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4U88_RS14320 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS14355 SM00382 ATPases associated with a variety of cellular activities A4U88_RS14420 SM00047 Lysozyme subfamily 2 A4U88_RS14465 SM00858 A4U88_RS14465 A4U88_RS14520 SM00448 cheY-homologous receiver domain A4U88_RS14525 SM00448 cheY-homologous receiver domain A4U88_RS14535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4U88_RS14535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS14535 SM00319 Homologues of the ligand binding domain of Tar A4U88_RS14540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4U88_RS14540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS14540 SM00319 Homologues of the ligand binding domain of Tar A4U88_RS14545 SM00260 Two component signalling adaptor domain A4U88_RS14550 SM00073 Histidine Phosphotransfer domain A4U88_RS14550 SM00260 Two component signalling adaptor domain A4U88_RS14550 SM00387 Histidine kinase-like ATPases A4U88_RS14550 SM01231 A4U88_RS14550 A4U88_RS14585 SM00829 Enoylreductase A4U88_RS14720 SM00331 Sigma factor PP2C-like phosphatases A4U88_RS14720 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A4U88_RS14750 SM00382 ATPases associated with a variety of cellular activities A4U88_RS14750 SM01086 C-terminal, D2-small domain, of ClpB protein A4U88_RS14765 SM00871 Bacterial transcription activator, effector binding domain A4U88_RS14775 SM00354 helix_turn _helix lactose operon repressor A4U88_RS14830 SM00346 helix_turn_helix isocitrate lyase regulation A4U88_RS14835 SM00882 Coenzyme A transferase A4U88_RS14840 SM00882 Coenzyme A transferase A4U88_RS14900 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4U88_RS14925 SM00831 Cation transporter/ATPase, N-terminus A4U88_RS14955 SM00421 helix_turn_helix, Lux Regulon A4U88_RS14975 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS15035 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS15185 SM00357 Cold shock protein domain A4U88_RS15200 SM00829 Enoylreductase A4U88_RS15245 SM00267 diguanylate cyclase A4U88_RS15370 SM00823 Phosphopantetheine attachment site A4U88_RS15380 SM00564 beta-propeller repeat A4U88_RS15475 SM00421 helix_turn_helix, Lux Regulon A4U88_RS15540 SM00382 ATPases associated with a variety of cellular activities A4U88_RS15540 SM01086 C-terminal, D2-small domain, of ClpB protein A4U88_RS15595 SM00347 helix_turn_helix multiple antibiotic resistance protein A4U88_RS15620 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4U88_RS15645 SM00382 ATPases associated with a variety of cellular activities A4U88_RS15660 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS15695 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS15745 SM00382 ATPases associated with a variety of cellular activities A4U88_RS15765 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS15765 SM00382 ATPases associated with a variety of cellular activities A4U88_RS15770 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS15775 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS15865 SM00764 Citrate lyase ligase C-terminal domain A4U88_RS15870 SM00448 cheY-homologous receiver domain A4U88_RS15905 SM00421 helix_turn_helix, Lux Regulon A4U88_RS15945 SM00235 Zinc-dependent metalloprotease A4U88_RS15995 SM00382 ATPases associated with a variety of cellular activities A4U88_RS16000 SM00382 ATPases associated with a variety of cellular activities A4U88_RS16070 SM00822 A4U88_RS16070 A4U88_RS16155 SM00354 helix_turn _helix lactose operon repressor A4U88_RS16160 SM01007 Class II Aldolase and Adducin N-terminal domain A4U88_RS16180 SM00382 ATPases associated with a variety of cellular activities A4U88_RS16190 SM00829 Enoylreductase A4U88_RS16205 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS16220 SM00644 A4U88_RS16220 A4U88_RS16245 SM00479 A4U88_RS16245 A4U88_RS16260 SM01230 A4U88_RS16260 A4U88_RS16265 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS16270 SM00382 ATPases associated with a variety of cellular activities A4U88_RS16290 SM00382 ATPases associated with a variety of cellular activities A4U88_RS16300 SM00267 diguanylate cyclase A4U88_RS16325 SM00518 AP endonuclease family 2 A4U88_RS16375 SM00841 Elongation factor P, C-terminal A4U88_RS16375 SM01185 A4U88_RS16375 A4U88_RS16395 SM00833 Cobalamin synthesis protein cobW C-terminal domain A4U88_RS16400 SM00014 Acid phosphatase homologues A4U88_RS16415 SM00052 Putative diguanylate phosphodiesterase A4U88_RS16435 SM00382 ATPases associated with a variety of cellular activities A4U88_RS16450 SM00363 S4 RNA-binding domain A4U88_RS16455 SM00487 DEAD-like helicases superfamily A4U88_RS16455 SM00490 helicase superfamily c-terminal domain A4U88_RS16490 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4U88_RS16505 SM00387 Histidine kinase-like ATPases A4U88_RS16505 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS16510 SM00421 helix_turn_helix, Lux Regulon A4U88_RS16510 SM00448 cheY-homologous receiver domain A4U88_RS16540 SM00232 JAB/MPN domain A4U88_RS16620 SM00849 Metallo-beta-lactamase superfamily A4U88_RS16660 SM00387 Histidine kinase-like ATPases A4U88_RS16665 SM00421 helix_turn_helix, Lux Regulon A4U88_RS16665 SM00448 cheY-homologous receiver domain A4U88_RS16670 SM00387 Histidine kinase-like ATPases A4U88_RS16670 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS16670 SM00448 cheY-homologous receiver domain A4U88_RS16675 SM00434 DNA Topoisomerase IV A4U88_RS16705 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS16715 SM00852 Probable molybdopterin binding domain A4U88_RS16730 SM01060 A4U88_RS16730 A4U88_RS16740 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A4U88_RS16770 SM00822 A4U88_RS16770 A4U88_RS16845 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4U88_RS16845 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A4U88_RS16850 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A4U88_RS16885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4U88_RS16920 SM00861 Transketolase, pyrimidine binding domain A4U88_RS16945 SM00354 helix_turn _helix lactose operon repressor A4U88_RS16965 SM00905 Dihydroneopterin aldolase A4U88_RS16975 SM00382 ATPases associated with a variety of cellular activities A4U88_RS16990 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS17035 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4U88_RS17045 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS17055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS17055 SM00387 Histidine kinase-like ATPases A4U88_RS17055 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS17060 SM00448 cheY-homologous receiver domain A4U88_RS17060 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS17095 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS17125 SM00450 Rhodanese Homology Domain A4U88_RS17130 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS17160 SM00825 Beta-ketoacyl synthase A4U88_RS17200 SM00463 Small MutS-related domain A4U88_RS17205 SM00855 Phosphoglycerate mutase family A4U88_RS17275 SM00382 ATPases associated with a variety of cellular activities A4U88_RS17310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4U88_RS17310 SM00091 PAS domain A4U88_RS17310 SM00421 helix_turn_helix, Lux Regulon A4U88_RS17405 SM00448 cheY-homologous receiver domain A4U88_RS17405 SM00850 LytTr DNA-binding domain A4U88_RS17530 SM00382 ATPases associated with a variety of cellular activities A4U88_RS17590 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4U88_RS17590 SM00292 breast cancer carboxy-terminal domain A4U88_RS17590 SM00532 Ligase N family A4U88_RS17625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS17625 SM00387 Histidine kinase-like ATPases A4U88_RS17625 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS17630 SM00448 cheY-homologous receiver domain A4U88_RS17630 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS17640 SM00382 ATPases associated with a variety of cellular activities A4U88_RS17685 SM00646 A4U88_RS17685 A4U88_RS17730 SM00919 Malic enzyme, NAD binding domain A4U88_RS17730 SM01274 A4U88_RS17730 A4U88_RS17750 SM00495 Chitin-binding domain type 3 A4U88_RS17750 SM00636 A4U88_RS17750 A4U88_RS17770 SM01120 A4U88_RS17770 A4U88_RS17780 SM00822 A4U88_RS17780 A4U88_RS17790 SM00829 Enoylreductase A4U88_RS17805 SM00861 Transketolase, pyrimidine binding domain A4U88_RS17815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS17815 SM00387 Histidine kinase-like ATPases A4U88_RS17820 SM00421 helix_turn_helix, Lux Regulon A4U88_RS17820 SM00448 cheY-homologous receiver domain A4U88_RS17835 SM00028 Tetratricopeptide repeats A4U88_RS17845 SM00421 helix_turn_helix, Lux Regulon A4U88_RS17895 SM01130 A4U88_RS17895 A4U88_RS17940 SM00344 helix_turn_helix ASNC type A4U88_RS18015 SM00382 ATPases associated with a variety of cellular activities A4U88_RS18045 SM00116 Domain in cystathionine beta-synthase and other proteins. A4U88_RS18045 SM00924 MgtE intracellular N domain A4U88_RS18050 SM00052 Putative diguanylate phosphodiesterase A4U88_RS18050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4U88_RS18050 SM00091 PAS domain A4U88_RS18050 SM00267 diguanylate cyclase A4U88_RS18110 SM00448 cheY-homologous receiver domain A4U88_RS18110 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS18135 SM00046 Diacylglycerol kinase catalytic domain (presumed) A4U88_RS18140 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A4U88_RS18170 SM01133 A4U88_RS18170 A4U88_RS18200 SM00420 helix_turn_helix, Deoxyribose operon repressor A4U88_RS18200 SM01134 A4U88_RS18200 A4U88_RS18205 SM00116 Domain in cystathionine beta-synthase and other proteins. A4U88_RS18270 SM00363 S4 RNA-binding domain A4U88_RS18285 SM00421 helix_turn_helix, Lux Regulon A4U88_RS18285 SM00448 cheY-homologous receiver domain A4U88_RS18290 SM00387 Histidine kinase-like ATPases A4U88_RS18290 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS18290 SM00448 cheY-homologous receiver domain A4U88_RS18320 SM00116 Domain in cystathionine beta-synthase and other proteins. A4U88_RS18320 SM01240 A4U88_RS18320 A4U88_RS18340 SM00354 helix_turn _helix lactose operon repressor A4U88_RS18370 SM00564 beta-propeller repeat A4U88_RS18390 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS18395 SM00028 Tetratricopeptide repeats A4U88_RS18405 SM00562 A4U88_RS18405 A4U88_RS18435 SM00271 DnaJ molecular chaperone homology domain A4U88_RS18525 SM00382 ATPases associated with a variety of cellular activities A4U88_RS18545 SM00938 Nitrogen regulatory protein P-II A4U88_RS18565 SM00387 Histidine kinase-like ATPases A4U88_RS18565 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS18570 SM01211 A4U88_RS18570 A4U88_RS18575 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS18635 SM00358 Double-stranded RNA binding motif A4U88_RS18635 SM00535 Ribonuclease III family A4U88_RS18690 SM00248 ankyrin repeats A4U88_RS18705 SM00986 Uracil DNA glycosylase superfamily A4U88_RS18705 SM00987 UreE urease accessory protein, C-terminal domain A4U88_RS18860 SM00463 Small MutS-related domain A4U88_RS18910 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS18955 SM00822 A4U88_RS18955 A4U88_RS18960 SM00849 Metallo-beta-lactamase superfamily A4U88_RS18975 SM00091 PAS domain A4U88_RS18975 SM00387 Histidine kinase-like ATPases A4U88_RS18980 SM00448 cheY-homologous receiver domain A4U88_RS18985 SM00382 ATPases associated with a variety of cellular activities A4U88_RS19020 SM00347 helix_turn_helix multiple antibiotic resistance protein A4U88_RS19040 SM00967 RNA 2'-O ribose methyltransferase substrate binding A4U88_RS19050 SM01144 A4U88_RS19050 A4U88_RS19055 SM00881 CoA binding domain A4U88_RS19100 SM00382 ATPases associated with a variety of cellular activities A4U88_RS19100 SM00930 A4U88_RS19100 A4U88_RS19140 SM01322 A4U88_RS19140 A4U88_RS19160 SM00977 TilS substrate C-terminal domain A4U88_RS19200 SM00481 DNA polymerase alpha chain like domain A4U88_RS19230 SM00935 Outer membrane protein (OmpH-like) A4U88_RS19240 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4U88_RS19285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4U88_RS19315 SM01359 A4U88_RS19315 A4U88_RS19315 SM01360 A4U88_RS19315 A4U88_RS19345 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A4U88_RS19345 SM00475 5'-3' exonuclease A4U88_RS19385 SM00925 MltA specific insert domain A4U88_RS19405 SM00646 A4U88_RS19405 A4U88_RS19465 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A4U88_RS19475 SM00927 DNA mismatch repair enzyme MutH A4U88_RS19500 SM00563 Phosphate acyltransferases A4U88_RS19510 SM00354 helix_turn _helix lactose operon repressor A4U88_RS19520 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS19540 SM00849 Metallo-beta-lactamase superfamily A4U88_RS19555 SM00382 ATPases associated with a variety of cellular activities A4U88_RS19600 SM00382 ATPases associated with a variety of cellular activities A4U88_RS19610 SM00421 helix_turn_helix, Lux Regulon A4U88_RS19615 SM00421 helix_turn_helix, Lux Regulon A4U88_RS19665 SM00382 ATPases associated with a variety of cellular activities A4U88_RS19745 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS19745 SM00871 Bacterial transcription activator, effector binding domain A4U88_RS19750 SM00257 Lysin motif A4U88_RS19795 SM00354 helix_turn _helix lactose operon repressor A4U88_RS19875 SM00448 cheY-homologous receiver domain A4U88_RS19875 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS19935 SM00382 ATPases associated with a variety of cellular activities A4U88_RS19970 SM00448 cheY-homologous receiver domain A4U88_RS19970 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS19975 SM00387 Histidine kinase-like ATPases A4U88_RS19975 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS19985 SM00829 Enoylreductase A4U88_RS20015 SM01011 Aminopeptidase P, N-terminal domain A4U88_RS20065 SM00346 helix_turn_helix isocitrate lyase regulation A4U88_RS20110 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A4U88_RS20120 SM01007 Class II Aldolase and Adducin N-terminal domain A4U88_RS20175 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4U88_RS20180 SM00382 ATPases associated with a variety of cellular activities A4U88_RS20215 SM00861 Transketolase, pyrimidine binding domain A4U88_RS20270 SM00346 helix_turn_helix isocitrate lyase regulation A4U88_RS20275 SM00822 A4U88_RS20275 A4U88_RS20335 SM00382 ATPases associated with a variety of cellular activities A4U88_RS20350 SM00487 DEAD-like helicases superfamily A4U88_RS20350 SM00490 helicase superfamily c-terminal domain A4U88_RS20350 SM00847 Helicase associated domain (HA2) Add an annotation A4U88_RS20390 SM00387 Histidine kinase-like ATPases A4U88_RS20390 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS20395 SM00448 cheY-homologous receiver domain A4U88_RS20395 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS20425 SM00382 ATPases associated with a variety of cellular activities A4U88_RS20485 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS20485 SM00895 A4U88_RS20485 A4U88_RS20525 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS20535 SM00731 SprT homologues. A4U88_RS20560 SM00732 Likely ribonuclease with RNase H fold. A4U88_RS20565 SM00382 ATPases associated with a variety of cellular activities A4U88_RS20585 SM01152 A4U88_RS20585 A4U88_RS20595 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS20625 SM00478 endonuclease III A4U88_RS20625 SM00525 A4U88_RS20625 A4U88_RS20685 SM00421 helix_turn_helix, Lux Regulon A4U88_RS20695 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS20760 SM00640 Glycosyl hydrolases family 32 A4U88_RS20765 SM00354 helix_turn _helix lactose operon repressor A4U88_RS20795 SM00829 Enoylreductase A4U88_RS20800 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS20820 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS20825 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS20825 SM00866 A4U88_RS20825 A4U88_RS20865 SM00434 DNA Topoisomerase IV A4U88_RS20885 SM00387 Histidine kinase-like ATPases A4U88_RS20885 SM00433 TopoisomeraseII A4U88_RS20915 SM00091 PAS domain A4U88_RS20955 SM00098 Alkaline phosphatase homologues A4U88_RS20980 SM01118 A4U88_RS20980 A4U88_RS20985 SM00287 Bacterial SH3 domain homologues A4U88_RS21000 SM00905 Dihydroneopterin aldolase A4U88_RS21005 SM01207 A4U88_RS21005 A4U88_RS21020 SM00400 zinc finger A4U88_RS21020 SM00493 A4U88_RS21020 A4U88_RS21020 SM00766 DNA primase DnaG DnaB-binding A4U88_RS21095 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS21100 SM00357 Cold shock protein domain A4U88_RS21110 SM00382 ATPases associated with a variety of cellular activities A4U88_RS21150 SM00858 A4U88_RS21150 A4U88_RS21165 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS21165 SM00895 A4U88_RS21165 A4U88_RS21250 SM00749 bacterial OsmY and nodulation domain A4U88_RS21265 SM00073 Histidine Phosphotransfer domain A4U88_RS21265 SM00091 PAS domain A4U88_RS21265 SM00387 Histidine kinase-like ATPases A4U88_RS21265 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS21265 SM00448 cheY-homologous receiver domain A4U88_RS21270 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS21330 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4U88_RS21335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4U88_RS21370 SM00382 ATPases associated with a variety of cellular activities A4U88_RS21380 SM00116 Domain in cystathionine beta-synthase and other proteins. A4U88_RS21400 SM00382 ATPases associated with a variety of cellular activities A4U88_RS21435 SM00530 Helix-turn-helix XRE-family like proteins A4U88_RS21510 SM00342 helix_turn_helix, arabinose operon control protein A4U88_RS21600 SM00316 Ribosomal protein S1-like RNA-binding domain A4U88_RS21630 SM00829 Enoylreductase A4U88_RS21655 SM00878 Biotin carboxylase C-terminal domain A4U88_RS21815 SM00829 Enoylreductase A4U88_RS21820 SM01266 A4U88_RS21820 A4U88_RS21840 SM00344 helix_turn_helix ASNC type A4U88_RS21845 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS21850 SM01005 Alanine racemase, C-terminal domain A4U88_RS21855 SM00382 ATPases associated with a variety of cellular activities A4U88_RS21860 SM00829 Enoylreductase A4U88_RS21885 SM01266 A4U88_RS21885 A4U88_RS21935 SM00354 helix_turn _helix lactose operon repressor A4U88_RS21955 SM00382 ATPases associated with a variety of cellular activities A4U88_RS22020 SM00912 haemagglutination activity domain A4U88_RS22030 SM00382 ATPases associated with a variety of cellular activities A4U88_RS22055 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS22055 SM00866 A4U88_RS22055 A4U88_RS22195 SM01321 A4U88_RS22195 A4U88_RS22205 SM00422 helix_turn_helix, mercury resistance A4U88_RS22220 SM00662 RNA polymerases D A4U88_RS22225 SM00363 S4 RNA-binding domain A4U88_RS22225 SM01390 A4U88_RS22225 A4U88_RS22290 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4U88_RS22295 SM01374 A4U88_RS22295 A4U88_RS22315 SM00322 K homology RNA-binding domain A4U88_RS22330 SM01382 A4U88_RS22330 A4U88_RS22330 SM01383 A4U88_RS22330 A4U88_RS22350 SM01403 A4U88_RS22350 A4U88_RS22370 SM00838 Elongation factor G C-terminus A4U88_RS22370 SM00889 Elongation factor G, domain IV A4U88_RS22425 SM00354 helix_turn _helix lactose operon repressor A4U88_RS22450 SM00382 ATPases associated with a variety of cellular activities A4U88_RS22465 SM00382 ATPases associated with a variety of cellular activities A4U88_RS22470 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS22505 SM00100 Cyclic nucleotide-monophosphate binding domain A4U88_RS22505 SM00419 helix_turn_helix, cAMP Regulatory protein A4U88_RS22530 SM00382 ATPases associated with a variety of cellular activities A4U88_RS22550 SM00448 cheY-homologous receiver domain A4U88_RS22550 SM00850 LytTr DNA-binding domain A4U88_RS22555 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A4U88_RS22580 SM00354 helix_turn _helix lactose operon repressor A4U88_RS22700 SM00363 S4 RNA-binding domain A4U88_RS22725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS22725 SM00387 Histidine kinase-like ATPases A4U88_RS22725 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS22730 SM00448 cheY-homologous receiver domain A4U88_RS22730 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS22740 SM00271 DnaJ molecular chaperone homology domain A4U88_RS22750 SM00316 Ribosomal protein S1-like RNA-binding domain A4U88_RS22750 SM00732 Likely ribonuclease with RNase H fold. A4U88_RS22755 SM00899 A4U88_RS22755 A4U88_RS22805 SM00421 helix_turn_helix, Lux Regulon A4U88_RS22810 SM00450 Rhodanese Homology Domain A4U88_RS22820 SM00420 helix_turn_helix, Deoxyribose operon repressor A4U88_RS22820 SM01134 A4U88_RS22820 A4U88_RS22845 SM00642 Alpha-amylase domain A4U88_RS22850 SM00642 Alpha-amylase domain A4U88_RS22855 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4U88_RS22875 SM00354 helix_turn _helix lactose operon repressor A4U88_RS22960 SM00382 ATPases associated with a variety of cellular activities A4U88_RS23015 SM00421 helix_turn_helix, Lux Regulon A4U88_RS23040 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS23045 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS23125 SM00822 A4U88_RS23125 A4U88_RS23140 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4U88_RS23150 SM00382 ATPases associated with a variety of cellular activities A4U88_RS23190 SM01022 A4U88_RS23190 A4U88_RS23220 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS23245 SM00869 Autotransporter beta-domain A4U88_RS23260 SM01321 A4U88_RS23260 A4U88_RS23270 SM00052 Putative diguanylate phosphodiesterase A4U88_RS23270 SM00091 PAS domain A4U88_RS23270 SM00267 diguanylate cyclase A4U88_RS23300 SM00052 Putative diguanylate phosphodiesterase A4U88_RS23310 SM00421 helix_turn_helix, Lux Regulon A4U88_RS23375 SM00382 ATPases associated with a variety of cellular activities A4U88_RS23490 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4U88_RS23530 SM00487 DEAD-like helicases superfamily A4U88_RS23530 SM00490 helicase superfamily c-terminal domain A4U88_RS23535 SM00354 helix_turn _helix lactose operon repressor A4U88_RS23550 SM00382 ATPases associated with a variety of cellular activities A4U88_RS23550 SM01086 C-terminal, D2-small domain, of ClpB protein A4U88_RS23635 SM00448 cheY-homologous receiver domain A4U88_RS23635 SM00862 Transcriptional regulatory protein, C terminal A4U88_RS23640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4U88_RS23640 SM00387 Histidine kinase-like ATPases A4U88_RS23640 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS23650 SM00880 A4U88_RS23650 A4U88_RS23660 SM00971 Serine acetyltransferase, N-terminal A4U88_RS23680 SM00450 Rhodanese Homology Domain A4U88_RS23700 SM00829 Enoylreductase A4U88_RS23785 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A4U88_RS23785 SM01232 A4U88_RS23785 A4U88_RS23855 SM00072 Guanylate kinase homologues. A4U88_RS23860 SM01409 A4U88_RS23860 A4U88_RS23865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4U88_RS23865 SM00954 Region found in RelA / SpoT proteins A4U88_RS23920 SM01230 A4U88_RS23920 A4U88_RS23925 SM00091 PAS domain A4U88_RS23925 SM00387 Histidine kinase-like ATPases A4U88_RS23925 SM00388 His Kinase A (phosphoacceptor) domain A4U88_RS23930 SM00382 ATPases associated with a variety of cellular activities A4U88_RS23930 SM00448 cheY-homologous receiver domain A4U88_RS23935 SM00729 Elongator protein 3, MiaB family, Radical SAM A4U88_RS23960 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A4U88_RS23960 SM00474 3'-5' exonuclease A4U88_RS23960 SM00475 5'-3' exonuclease A4U88_RS23960 SM00482 DNA polymerase A domain A4U88_RS23965 SM00563 Phosphate acyltransferases A4U88_RS24015 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4U88_RS24015 SM00895 A4U88_RS24015 A4U88_RS24025 SM00354 helix_turn _helix lactose operon repressor A4U88_RS24045 SM00382 ATPases associated with a variety of cellular activities A4U88_RS24060 SM00382 ATPases associated with a variety of cellular activities A4U88_RS24065 SM00327 von Willebrand factor (vWF) type A domain A4U88_RS24075 SM00344 helix_turn_helix ASNC type A4U88_RS24085 SM01228 A4U88_RS24085 A4U88_RS24130 SM00382 ATPases associated with a variety of cellular activities A4U88_RS24165 SM00382 ATPases associated with a variety of cellular activities A4U88_RS24175 SM00062 Bacterial periplasmic substrate-binding proteins A4U88_RS24235 SM01234 A4U88_RS24235