locus-tag class description SAMA_RS00005 PF00258 Flavodoxin SAMA_RS00015 PF00756 Putative esterase SAMA_RS00020 PF00107 Zinc-binding dehydrogenase SAMA_RS00020 PF08240 Alcohol dehydrogenase GroES-like domain SAMA_RS00025 PF03466 LysR substrate binding domain SAMA_RS00025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS00035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SAMA_RS00040 PF01926 50S ribosome-binding GTPase SAMA_RS00040 PF12631 MnmE helical domain SAMA_RS00040 PF10396 GTP-binding protein TrmE N-terminus SAMA_RS00045 PF02096 60Kd inner membrane protein SAMA_RS00045 PF14849 YidC periplasmic domain SAMA_RS00050 PF00825 Ribonuclease P SAMA_RS00055 PF11638 DnaA N-terminal domain SAMA_RS00055 PF08299 Bacterial dnaA protein helix-turn-helix SAMA_RS00055 PF00308 Bacterial dnaA protein SAMA_RS00060 PF02768 DNA polymerase III beta subunit, C-terminal domain SAMA_RS00060 PF02767 DNA polymerase III beta subunit, central domain SAMA_RS00060 PF00712 DNA polymerase III beta subunit, N-terminal domain SAMA_RS00065 PF02463 RecF/RecN/SMC N terminal domain SAMA_RS00070 PF01751 Toprim domain SAMA_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS00070 PF18053 DNA gyrase B subunit insert domain SAMA_RS00070 PF00986 DNA gyrase B subunit, carboxyl terminus SAMA_RS00070 PF00204 DNA gyrase B SAMA_RS00080 PF01470 Pyroglutamyl peptidase SAMA_RS00095 PF03746 LamB/YcsF family SAMA_RS00100 PF02626 Carboxyltransferase domain, subdomain A and B SAMA_RS00110 PF00563 EAL domain SAMA_RS00110 PF08668 HDOD domain SAMA_RS00115 PF05746 DALR anticodon binding domain SAMA_RS00115 PF02092 Glycyl-tRNA synthetase beta subunit SAMA_RS00120 PF02091 Glycyl-tRNA synthetase alpha subunit SAMA_RS00125 PF03352 Methyladenine glycosylase SAMA_RS00130 PF07676 WD40-like Beta Propeller Repeat SAMA_RS00130 PF00326 Prolyl oligopeptidase family SAMA_RS00135 PF01206 Sulfurtransferase TusA SAMA_RS00140 PF16591 Helical bimodular sensor domain SAMA_RS00140 PF00672 HAMP domain SAMA_RS00140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS00145 PF00108 Thiolase, N-terminal domain SAMA_RS00145 PF02803 Thiolase, C-terminal domain SAMA_RS00150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SAMA_RS00150 PF00378 Enoyl-CoA hydratase/isomerase SAMA_RS00150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SAMA_RS00155 PF00557 Metallopeptidase family M24 SAMA_RS00160 PF09186 Domain of unknown function (DUF1949) SAMA_RS00160 PF01205 Uncharacterized protein family UPF0029 SAMA_RS00165 PF02386 Cation transport protein SAMA_RS00170 PF12724 Flavodoxin domain SAMA_RS00175 PF01022 Bacterial regulatory protein, arsR family SAMA_RS00185 PF02386 Cation transport protein SAMA_RS00190 PF02080 TrkA-C domain SAMA_RS00190 PF02254 TrkA-N domain SAMA_RS00195 PF01029 NusB family SAMA_RS00195 PF01189 16S rRNA methyltransferase RsmB/F SAMA_RS00200 PF02911 Formyl transferase, C-terminal domain SAMA_RS00200 PF00551 Formyl transferase SAMA_RS00205 PF01327 Polypeptide deformylase SAMA_RS00215 PF17782 DprA winged helix domain SAMA_RS00215 PF02481 DNA recombination-mediator protein A SAMA_RS00220 PF04361 Protein of unknown function (DUF494) SAMA_RS00235 PF01396 Topoisomerase DNA binding C4 zinc finger SAMA_RS00240 PF01300 Telomere recombination SAMA_RS00245 PF01218 Coproporphyrinogen III oxidase SAMA_RS00255 PF01488 Shikimate / quinate 5-dehydrogenase SAMA_RS00255 PF08501 Shikimate dehydrogenase substrate binding domain SAMA_RS00255 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SAMA_RS00265 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS00285 PF02082 Transcriptional regulator SAMA_RS00290 PF04748 Divergent polysaccharide deacetylase SAMA_RS00295 PF13180 PDZ domain SAMA_RS00295 PF03572 Peptidase family S41 SAMA_RS00300 PF01551 Peptidase family M23 SAMA_RS00305 PF01676 Metalloenzyme superfamily SAMA_RS00305 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SAMA_RS00310 PF00581 Rhodanese-like domain SAMA_RS00315 PF02556 Preprotein translocase subunit SecB SAMA_RS00320 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SAMA_RS00320 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SAMA_RS00330 PF00072 Response regulator receiver domain SAMA_RS00330 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS00340 PF00672 HAMP domain SAMA_RS00340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS00340 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS00340 PF01627 Hpt domain SAMA_RS00340 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SAMA_RS00340 PF00072 Response regulator receiver domain SAMA_RS00345 PF00994 Probable molybdopterin binding domain SAMA_RS00350 PF00877 NlpC/P60 family SAMA_RS00365 PF00768 D-alanyl-D-alanine carboxypeptidase SAMA_RS00385 PF06445 GyrI-like small molecule binding domain SAMA_RS00390 PF13411 MerR HTH family regulatory protein SAMA_RS00405 PF01979 Amidohydrolase family SAMA_RS00410 PF07702 UTRA domain SAMA_RS00410 PF00392 Bacterial regulatory proteins, gntR family SAMA_RS00415 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS00415 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS00415 PF00563 EAL domain SAMA_RS00420 PF12146 Serine aminopeptidase, S33 SAMA_RS00430 PF00962 Adenosine/AMP deaminase SAMA_RS00435 PF06969 HemN C-terminal domain SAMA_RS00435 PF04055 Radical SAM superfamily SAMA_RS00440 PF01979 Amidohydrolase family SAMA_RS00450 PF04220 Der GTPase activator (YihI) SAMA_RS00460 PF00034 Cytochrome c SAMA_RS00465 PF01926 50S ribosome-binding GTPase SAMA_RS00470 PF01612 3'-5' exonuclease SAMA_RS00470 PF01367 5'-3' exonuclease, C-terminal SAM fold SAMA_RS00470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SAMA_RS00470 PF00476 DNA polymerase family A SAMA_RS00480 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease SAMA_RS00480 PF01694 Rhomboid family SAMA_RS00485 PF00581 Rhodanese-like domain SAMA_RS00490 PF08240 Alcohol dehydrogenase GroES-like domain SAMA_RS00490 PF00107 Zinc-binding dehydrogenase SAMA_RS00495 PF00155 Aminotransferase class I and II SAMA_RS00500 PF08360 QacR-like protein, C-terminal region SAMA_RS00500 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS00505 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SAMA_RS00515 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SAMA_RS00525 PF13439 Glycosyltransferase Family 4 SAMA_RS00525 PF00534 Glycosyl transferases group 1 SAMA_RS00555 PF01467 Cytidylyltransferase-like SAMA_RS00565 PF00535 Glycosyl transferase family 2 SAMA_RS00575 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SAMA_RS00580 PF03372 Endonuclease/Exonuclease/phosphatase family SAMA_RS00590 PF06827 Zinc finger found in FPG and IleRS SAMA_RS00590 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SAMA_RS00590 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SAMA_RS00600 PF06463 Molybdenum Cofactor Synthesis C SAMA_RS00600 PF04055 Radical SAM superfamily SAMA_RS00605 PF00994 Probable molybdopterin binding domain SAMA_RS00605 PF03454 MoeA C-terminal region (domain IV) SAMA_RS00605 PF03453 MoeA N-terminal region (domain I and II) SAMA_RS00610 PF12804 MobA-like NTP transferase domain SAMA_RS00615 PF00005 ABC transporter SAMA_RS00615 PF08402 TOBE domain SAMA_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component SAMA_RS00625 PF12849 PBP superfamily domain SAMA_RS00630 PF02954 Bacterial regulatory protein, Fis family SAMA_RS00630 PF00072 Response regulator receiver domain SAMA_RS00630 PF00158 Sigma-54 interaction domain SAMA_RS00635 PF00989 PAS fold SAMA_RS00635 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS00635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS00645 PF02592 Putative vitamin uptake transporter SAMA_RS00655 PF00425 chorismate binding enzyme SAMA_RS00660 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS00660 PF00593 TonB dependent receptor SAMA_RS00665 PF00005 ABC transporter SAMA_RS00690 PF11871 Domain of unknown function (DUF3391) SAMA_RS00690 PF01966 HD domain SAMA_RS00695 PF00899 ThiF family SAMA_RS00700 PF00994 Probable molybdopterin binding domain SAMA_RS00700 PF03453 MoeA N-terminal region (domain I and II) SAMA_RS00700 PF03454 MoeA C-terminal region (domain IV) SAMA_RS00710 PF00873 AcrB/AcrD/AcrF family SAMA_RS00715 PF00210 Ferritin-like domain SAMA_RS00720 PF00563 EAL domain SAMA_RS00720 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS00720 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS00725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SAMA_RS00730 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SAMA_RS00730 PF00326 Prolyl oligopeptidase family SAMA_RS00735 PF01541 GIY-YIG catalytic domain SAMA_RS00740 PF00072 Response regulator receiver domain SAMA_RS00740 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS00745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS00745 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS00745 PF00989 PAS fold SAMA_RS00745 PF11808 Phosphate regulon sensor protein PhoR SAMA_RS00770 PF00082 Subtilase family SAMA_RS00770 PF02225 PA domain SAMA_RS00770 PF00746 LPXTG cell wall anchor motif SAMA_RS00770 PF06280 Fn3-like domain SAMA_RS00785 PF00072 Response regulator receiver domain SAMA_RS00785 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS00795 PF01055 Glycosyl hydrolases family 31 SAMA_RS00795 PF13802 Galactose mutarotase-like SAMA_RS00795 PF17137 Domain of unknown function (DUF5110) SAMA_RS00795 PF16338 Domain of unknown function (DUF4968) SAMA_RS00800 PF12706 Beta-lactamase superfamily domain SAMA_RS00800 PF00753 Metallo-beta-lactamase superfamily SAMA_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS00805 PF03466 LysR substrate binding domain SAMA_RS00815 PF01645 Conserved region in glutamate synthase SAMA_RS00825 PF02472 Biopolymer transport protein ExbD/TolR SAMA_RS00835 PF01293 Phosphoenolpyruvate carboxykinase SAMA_RS00840 PF01430 Hsp33 protein SAMA_RS00845 PF01479 S4 domain SAMA_RS00850 PF11356 Type II secretion system protein C SAMA_RS00855 PF00263 Bacterial type II and III secretion system protein SAMA_RS00855 PF03958 Bacterial type II/III secretion system short domain SAMA_RS00860 PF00437 Type II/IV secretion system protein SAMA_RS00865 PF00482 Type II secretion system (T2SS), protein F SAMA_RS00870 PF08334 Type II secretion system (T2SS), protein G SAMA_RS00870 PF07963 Prokaryotic N-terminal methylation motif SAMA_RS00880 PF02501 Type II secretion system (T2SS), protein I SAMA_RS00880 PF07963 Prokaryotic N-terminal methylation motif SAMA_RS00885 PF11612 Type II secretion system (T2SS), protein J SAMA_RS00885 PF07963 Prokaryotic N-terminal methylation motif SAMA_RS00890 PF03934 Type II secretion system (T2SS), protein K SAMA_RS00895 PF05134 Type II secretion system (T2SS), protein L SAMA_RS00895 PF12693 GspL periplasmic domain SAMA_RS00905 PF01203 Type II secretion system (T2SS), protein N SAMA_RS00920 PF13419 Haloacid dehalogenase-like hydrolase SAMA_RS00925 PF00293 NUDIX domain SAMA_RS00930 PF00459 Inositol monophosphatase family SAMA_RS00945 PF07690 Major Facilitator Superfamily SAMA_RS00960 PF02769 AIR synthase related protein, C-terminal domain SAMA_RS00960 PF00586 AIR synthase related protein, N-terminal domain SAMA_RS00970 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS00975 PF05958 tRNA (Uracil-5-)-methyltransferase SAMA_RS00980 PF01177 Asp/Glu/Hydantoin racemase SAMA_RS01020 PF01565 FAD binding domain SAMA_RS01020 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SAMA_RS01025 PF03099 Biotin/lipoate A/B protein ligase family SAMA_RS01025 PF08279 HTH domain SAMA_RS01025 PF02237 Biotin protein ligase C terminal domain SAMA_RS01030 PF00485 Phosphoribulokinase / Uridine kinase family SAMA_RS01055 PF00009 Elongation factor Tu GTP binding domain SAMA_RS01055 PF03144 Elongation factor Tu domain 2 SAMA_RS01055 PF03143 Elongation factor Tu C-terminal domain SAMA_RS01060 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SAMA_RS01065 PF00467 KOW motif SAMA_RS01065 PF02357 Transcription termination factor nusG SAMA_RS01070 PF03946 Ribosomal protein L11, N-terminal domain SAMA_RS01070 PF00298 Ribosomal protein L11, RNA binding domain SAMA_RS01075 PF00687 Ribosomal protein L1p/L10e family SAMA_RS01080 PF00466 Ribosomal protein L10 SAMA_RS01085 PF00542 Ribosomal protein L7/L12 C-terminal domain SAMA_RS01085 PF16320 Ribosomal protein L7/L12 dimerisation domain SAMA_RS01090 PF04565 RNA polymerase Rpb2, domain 3 SAMA_RS01090 PF10385 RNA polymerase beta subunit external 1 domain SAMA_RS01090 PF04561 RNA polymerase Rpb2, domain 2 SAMA_RS01090 PF04560 RNA polymerase Rpb2, domain 7 SAMA_RS01090 PF00562 RNA polymerase Rpb2, domain 6 SAMA_RS01090 PF04563 RNA polymerase beta subunit SAMA_RS01095 PF04997 RNA polymerase Rpb1, domain 1 SAMA_RS01095 PF00623 RNA polymerase Rpb1, domain 2 SAMA_RS01095 PF04983 RNA polymerase Rpb1, domain 3 SAMA_RS01095 PF05000 RNA polymerase Rpb1, domain 4 SAMA_RS01095 PF04998 RNA polymerase Rpb1, domain 5 SAMA_RS01100 PF00164 Ribosomal protein S12/S23 SAMA_RS01105 PF00177 Ribosomal protein S7p/S5e SAMA_RS01110 PF00009 Elongation factor Tu GTP binding domain SAMA_RS01110 PF00679 Elongation factor G C-terminus SAMA_RS01110 PF03144 Elongation factor Tu domain 2 SAMA_RS01110 PF03764 Elongation factor G, domain IV SAMA_RS01110 PF14492 Elongation Factor G, domain II SAMA_RS01115 PF00009 Elongation factor Tu GTP binding domain SAMA_RS01115 PF03144 Elongation factor Tu domain 2 SAMA_RS01115 PF03143 Elongation factor Tu C-terminal domain SAMA_RS01120 PF00338 Ribosomal protein S10p/S20e SAMA_RS01125 PF00297 Ribosomal protein L3 SAMA_RS01130 PF00573 Ribosomal protein L4/L1 family SAMA_RS01135 PF00276 Ribosomal protein L23 SAMA_RS01140 PF00181 Ribosomal Proteins L2, RNA binding domain SAMA_RS01140 PF03947 Ribosomal Proteins L2, C-terminal domain SAMA_RS01145 PF00203 Ribosomal protein S19 SAMA_RS01150 PF00237 Ribosomal protein L22p/L17e SAMA_RS01155 PF07650 KH domain SAMA_RS01155 PF00189 Ribosomal protein S3, C-terminal domain SAMA_RS01160 PF00252 Ribosomal protein L16p/L10e SAMA_RS01165 PF00831 Ribosomal L29 protein SAMA_RS01170 PF00366 Ribosomal protein S17 SAMA_RS01175 PF00238 Ribosomal protein L14p/L23e SAMA_RS01180 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SAMA_RS01185 PF00281 Ribosomal protein L5 SAMA_RS01185 PF00673 ribosomal L5P family C-terminus SAMA_RS01190 PF00253 Ribosomal protein S14p/S29e SAMA_RS01195 PF00410 Ribosomal protein S8 SAMA_RS01200 PF00347 Ribosomal protein L6 SAMA_RS01205 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SAMA_RS01210 PF00333 Ribosomal protein S5, N-terminal domain SAMA_RS01210 PF03719 Ribosomal protein S5, C-terminal domain SAMA_RS01215 PF00327 Ribosomal protein L30p/L7e SAMA_RS01220 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SAMA_RS01225 PF00344 SecY translocase SAMA_RS01230 PF00416 Ribosomal protein S13/S18 SAMA_RS01235 PF00411 Ribosomal protein S11 SAMA_RS01240 PF01479 S4 domain SAMA_RS01240 PF00163 Ribosomal protein S4/S9 N-terminal domain SAMA_RS01245 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SAMA_RS01245 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SAMA_RS01245 PF01000 RNA polymerase Rpb3/RpoA insert domain SAMA_RS01250 PF01196 Ribosomal protein L17 SAMA_RS01260 PF03100 CcmE SAMA_RS01265 PF04995 Heme exporter protein D (CcmD) SAMA_RS01270 PF01578 Cytochrome C assembly protein SAMA_RS01275 PF03379 CcmB protein SAMA_RS01280 PF00005 ABC transporter SAMA_RS01285 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SAMA_RS01290 PF03918 Cytochrome C biogenesis protein SAMA_RS01295 PF01578 Cytochrome C assembly protein SAMA_RS01295 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SAMA_RS01300 PF08534 Redoxin SAMA_RS01305 PF03918 Cytochrome C biogenesis protein SAMA_RS01310 PF08534 Redoxin SAMA_RS01365 PF00994 Probable molybdopterin binding domain SAMA_RS01365 PF02464 Competence-damaged protein SAMA_RS01375 PF00311 Phosphoenolpyruvate carboxylase SAMA_RS01380 PF01546 Peptidase family M20/M25/M40 SAMA_RS01380 PF07687 Peptidase dimerisation domain SAMA_RS01385 PF01118 Semialdehyde dehydrogenase, NAD binding domain SAMA_RS01385 PF02774 Semialdehyde dehydrogenase, dimerisation domain SAMA_RS01390 PF00696 Amino acid kinase family SAMA_RS01395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SAMA_RS01395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SAMA_RS01400 PF00764 Arginosuccinate synthase SAMA_RS01405 PF14698 Argininosuccinate lyase C-terminal SAMA_RS01405 PF00206 Lyase SAMA_RS01410 PF00501 AMP-binding enzyme SAMA_RS01415 PF12105 SpoU, rRNA methylase, C-terminal SAMA_RS01415 PF00588 SpoU rRNA Methylase family SAMA_RS01420 PF01042 Endoribonuclease L-PSP SAMA_RS01425 PF13291 ACT domain SAMA_RS01425 PF02824 TGS domain SAMA_RS01425 PF04607 Region found in RelA / SpoT proteins SAMA_RS01430 PF01192 RNA polymerase Rpb6 SAMA_RS01435 PF00625 Guanylate kinase SAMA_RS01445 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SAMA_RS01450 PF01636 Phosphotransferase enzyme family SAMA_RS01455 PF01790 Prolipoprotein diacylglyceryl transferase SAMA_RS01475 PF03466 LysR substrate binding domain SAMA_RS01475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS01500 PF08676 MutL C terminal dimerisation domain SAMA_RS01500 PF01119 DNA mismatch repair protein, C-terminal domain SAMA_RS01520 PF00145 C-5 cytosine-specific DNA methylase SAMA_RS01535 PF01235 Sodium:alanine symporter family SAMA_RS01540 PF13419 Haloacid dehalogenase-like hydrolase SAMA_RS01550 PF18494 Pullulanase Ins domain SAMA_RS01550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SAMA_RS01550 PF17967 Pullulanase N2 domain SAMA_RS01550 PF11852 Domain of unknown function (DUF3372) SAMA_RS01550 PF03714 Bacterial pullanase-associated domain SAMA_RS01555 PF07971 Glycosyl hydrolase family 92 SAMA_RS01555 PF17678 Glycosyl hydrolase family 92 N-terminal domain SAMA_RS01560 PF07971 Glycosyl hydrolase family 92 SAMA_RS01560 PF17678 Glycosyl hydrolase family 92 N-terminal domain SAMA_RS01570 PF00294 pfkB family carbohydrate kinase SAMA_RS01575 PF07690 Major Facilitator Superfamily SAMA_RS01585 PF00356 Bacterial regulatory proteins, lacI family SAMA_RS01605 PF01869 BadF/BadG/BcrA/BcrD ATPase family SAMA_RS01610 PF01112 Asparaginase SAMA_RS01620 PF03932 CutC family SAMA_RS01625 PF02929 Beta galactosidase small chain SAMA_RS01625 PF02837 Glycosyl hydrolases family 2, sugar binding domain SAMA_RS01625 PF16353 Domain of unknown function(DUF4981) SAMA_RS01625 PF00703 Glycosyl hydrolases family 2 SAMA_RS01625 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SAMA_RS01630 PF00474 Sodium:solute symporter family SAMA_RS01635 PF07971 Glycosyl hydrolase family 92 SAMA_RS01635 PF17678 Glycosyl hydrolase family 92 N-terminal domain SAMA_RS01670 PF02586 SOS response associated peptidase (SRAP) SAMA_RS01680 PF08378 Nuclease-related domain SAMA_RS01695 PF02586 SOS response associated peptidase (SRAP) SAMA_RS01715 PF03755 YicC-like family, N-terminal region SAMA_RS01715 PF08340 Domain of unknown function (DUF1732) SAMA_RS01720 PF01138 3' exoribonuclease family, domain 1 SAMA_RS01720 PF03725 3' exoribonuclease family, domain 2 SAMA_RS01725 PF00156 Phosphoribosyl transferase domain SAMA_RS01730 PF01227 GTP cyclohydrolase I SAMA_RS01740 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS01745 PF00692 dUTPase SAMA_RS01750 PF04127 DNA / pantothenate metabolism flavoprotein SAMA_RS01750 PF02441 Flavoprotein SAMA_RS01755 PF04002 RadC-like JAB domain SAMA_RS01760 PF00830 Ribosomal L28 family SAMA_RS01765 PF00471 Ribosomal protein L33 SAMA_RS01770 PF00583 Acetyltransferase (GNAT) family SAMA_RS01770 PF00696 Amino acid kinase family SAMA_RS01780 PF00892 EamA-like transporter family SAMA_RS01785 PF00271 Helicase conserved C-terminal domain SAMA_RS01785 PF16124 RecQ zinc-binding SAMA_RS01785 PF09382 RQC domain SAMA_RS01785 PF00270 DEAD/DEAH box helicase SAMA_RS01785 PF00570 HRDC domain SAMA_RS01795 PF08502 LeuA allosteric (dimerisation) domain SAMA_RS01795 PF00682 HMGL-like SAMA_RS01800 PF00180 Isocitrate/isopropylmalate dehydrogenase SAMA_RS01805 PF00330 Aconitase family (aconitate hydratase) SAMA_RS01810 PF00694 Aconitase C-terminal domain SAMA_RS01815 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SAMA_RS01825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SAMA_RS01825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SAMA_RS01845 PF02381 MraZ protein, putative antitoxin-like SAMA_RS01850 PF01795 MraW methylase family SAMA_RS01855 PF04999 Cell division protein FtsL SAMA_RS01860 PF03717 Penicillin-binding Protein dimerisation domain SAMA_RS01860 PF00905 Penicillin binding protein transpeptidase domain SAMA_RS01865 PF08245 Mur ligase middle domain SAMA_RS01865 PF02875 Mur ligase family, glutamate ligase domain SAMA_RS01865 PF01225 Mur ligase family, catalytic domain SAMA_RS01870 PF08245 Mur ligase middle domain SAMA_RS01870 PF02875 Mur ligase family, glutamate ligase domain SAMA_RS01870 PF01225 Mur ligase family, catalytic domain SAMA_RS01875 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SAMA_RS01875 PF00953 Glycosyl transferase family 4 SAMA_RS01880 PF08245 Mur ligase middle domain SAMA_RS01880 PF02875 Mur ligase family, glutamate ligase domain SAMA_RS01885 PF01098 Cell cycle protein SAMA_RS01890 PF04101 Glycosyltransferase family 28 C-terminal domain SAMA_RS01890 PF03033 Glycosyltransferase family 28 N-terminal domain SAMA_RS01895 PF02875 Mur ligase family, glutamate ligase domain SAMA_RS01895 PF01225 Mur ligase family, catalytic domain SAMA_RS01895 PF08245 Mur ligase middle domain SAMA_RS01900 PF03799 Cell division protein FtsQ SAMA_RS01900 PF08478 POTRA domain, FtsQ-type SAMA_RS01905 PF02491 SHS2 domain inserted in FTSA SAMA_RS01910 PF12327 FtsZ family, C-terminal domain SAMA_RS01910 PF00091 Tubulin/FtsZ family, GTPase domain SAMA_RS01915 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SAMA_RS01925 PF01551 Peptidase family M23 SAMA_RS01930 PF07516 SecA Wing and Scaffold domain SAMA_RS01930 PF01043 SecA preprotein cross-linking domain SAMA_RS01930 PF07517 SecA DEAD-like domain SAMA_RS01930 PF02810 SEC-C motif SAMA_RS01980 PF00293 NUDIX domain SAMA_RS01985 PF03884 DNA gyrase inhibitor YacG SAMA_RS01990 PF07072 Cell division protein SAMA_RS01995 PF01121 Dephospho-CoA kinase SAMA_RS02000 PF01478 Type IV leader peptidase family SAMA_RS02000 PF06750 Bacterial Peptidase A24 N-terminal domain SAMA_RS02005 PF00482 Type II secretion system (T2SS), protein F SAMA_RS02010 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SAMA_RS02010 PF00437 Type II/IV secretion system protein SAMA_RS02015 PF00114 Pilin (bacterial filament) SAMA_RS02015 PF07963 Prokaryotic N-terminal methylation motif SAMA_RS02020 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SAMA_RS02020 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SAMA_RS02025 PF01510 N-acetylmuramoyl-L-alanine amidase SAMA_RS02035 PF00392 Bacterial regulatory proteins, gntR family SAMA_RS02035 PF07729 FCD domain SAMA_RS02040 PF00456 Transketolase, thiamine diphosphate binding domain SAMA_RS02040 PF17831 Pyruvate dehydrogenase E1 component middle domain SAMA_RS02045 PF02817 e3 binding domain SAMA_RS02045 PF00364 Biotin-requiring enzyme SAMA_RS02045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SAMA_RS02050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SAMA_RS02050 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAMA_RS02055 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS02055 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS02055 PF00563 EAL domain SAMA_RS02060 PF01734 Patatin-like phospholipase SAMA_RS02065 PF05649 Peptidase family M13 SAMA_RS02065 PF01431 Peptidase family M13 SAMA_RS02070 PF13419 Haloacid dehalogenase-like hydrolase SAMA_RS02075 PF11791 Aconitate B N-terminal domain SAMA_RS02075 PF06434 Aconitate hydratase 2 N-terminus SAMA_RS02075 PF00330 Aconitase family (aconitate hydratase) SAMA_RS02085 PF00270 DEAD/DEAH box helicase SAMA_RS02085 PF00271 Helicase conserved C-terminal domain SAMA_RS02100 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ SAMA_RS02105 PF01208 Uroporphyrinogen decarboxylase (URO-D) SAMA_RS02110 PF08448 PAS fold SAMA_RS02110 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS02110 PF00563 EAL domain SAMA_RS02115 PF00106 short chain dehydrogenase SAMA_RS02135 PF13402 Peptidase M60, enhancin and enhancin-like SAMA_RS02135 PF18650 Immunomodulating metalloprotease N-terminal domain SAMA_RS02135 PF18642 Immunomodulating metalloprotease helical domain SAMA_RS02140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SAMA_RS02140 PF02844 Phosphoribosylglycinamide synthetase, N domain SAMA_RS02140 PF02843 Phosphoribosylglycinamide synthetase, C domain SAMA_RS02145 PF01808 AICARFT/IMPCHase bienzyme SAMA_RS02145 PF02142 MGS-like domain SAMA_RS02150 PF13411 MerR HTH family regulatory protein SAMA_RS02160 PF00326 Prolyl oligopeptidase family SAMA_RS02170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS02170 PF03466 LysR substrate binding domain SAMA_RS02175 PF13533 Biotin-lipoyl like SAMA_RS02180 PF07690 Major Facilitator Superfamily SAMA_RS02185 PF13673 Acetyltransferase (GNAT) domain SAMA_RS02205 PF00924 Mechanosensitive ion channel SAMA_RS02205 PF05552 Conserved TM helix SAMA_RS02210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SAMA_RS02215 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SAMA_RS02215 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SAMA_RS02220 PF04325 Protein of unknown function (DUF465) SAMA_RS02225 PF01048 Phosphorylase superfamily SAMA_RS02245 PF01145 SPFH domain / Band 7 family SAMA_RS02250 PF01145 SPFH domain / Band 7 family SAMA_RS02265 PF00580 UvrD/REP helicase N-terminal domain SAMA_RS02265 PF13361 UvrD-like helicase C-terminal domain SAMA_RS02270 PF01040 UbiA prenyltransferase family SAMA_RS02295 PF00175 Oxidoreductase NAD-binding domain SAMA_RS02300 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SAMA_RS02310 PF07504 Fungalysin/Thermolysin Propeptide Motif SAMA_RS02310 PF03413 Peptidase propeptide and YPEB domain SAMA_RS02310 PF01447 Thermolysin metallopeptidase, catalytic domain SAMA_RS02310 PF02868 Thermolysin metallopeptidase, alpha-helical domain SAMA_RS02310 PF04151 Bacterial pre-peptidase C-terminal domain SAMA_RS02320 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SAMA_RS02320 PF00400 WD domain, G-beta repeat SAMA_RS02330 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS02330 PF01590 GAF domain SAMA_RS02330 PF00563 EAL domain SAMA_RS02330 PF00360 Phytochrome region SAMA_RS02340 PF01979 Amidohydrolase family SAMA_RS02345 PF00300 Histidine phosphatase superfamily (branch 1) SAMA_RS02355 PF00072 Response regulator receiver domain SAMA_RS02355 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS02370 PF07724 AAA domain (Cdc48 subfamily) SAMA_RS02370 PF00004 ATPase family associated with various cellular activities (AAA) SAMA_RS02370 PF10431 C-terminal, D2-small domain, of ClpB protein SAMA_RS02375 PF00227 Proteasome subunit SAMA_RS02385 PF03485 Arginyl tRNA synthetase N terminal domain SAMA_RS02385 PF00750 tRNA synthetases class I (R) SAMA_RS02385 PF05746 DALR anticodon binding domain SAMA_RS02395 PF17764 3′ DNA-binding domain (3′BD) SAMA_RS02395 PF00271 Helicase conserved C-terminal domain SAMA_RS02395 PF00270 DEAD/DEAH box helicase SAMA_RS02395 PF18074 Primosomal protein N C-terminal domain SAMA_RS02395 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SAMA_RS02410 PF03949 Malic enzyme, NAD binding domain SAMA_RS02410 PF00390 Malic enzyme, N-terminal domain SAMA_RS02415 PF17157 Gammaproteobacterial periplasmic sensor domain SAMA_RS02415 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS02415 PF00563 EAL domain SAMA_RS02440 PF00263 Bacterial type II and III secretion system protein SAMA_RS02440 PF03958 Bacterial type II/III secretion system short domain SAMA_RS02445 PF01471 Putative peptidoglycan binding domain SAMA_RS02445 PF13401 AAA domain SAMA_RS02455 PF00437 Type II/IV secretion system protein SAMA_RS02455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SAMA_RS02460 PF00482 Type II secretion system (T2SS), protein F SAMA_RS02470 PF07963 Prokaryotic N-terminal methylation motif SAMA_RS02475 PF07963 Prokaryotic N-terminal methylation motif SAMA_RS02510 PF04085 rod shape-determining protein MreC SAMA_RS02515 PF04093 rod shape-determining protein MreD SAMA_RS02520 PF02545 Maf-like protein SAMA_RS02525 PF00575 S1 RNA binding domain SAMA_RS02525 PF10150 Ribonuclease E/G family SAMA_RS02540 PF00795 Carbon-nitrogen hydrolase SAMA_RS02545 PF01523 Putative modulator of DNA gyrase SAMA_RS02550 PF00107 Zinc-binding dehydrogenase SAMA_RS02550 PF16884 N-terminal domain of oxidoreductase SAMA_RS02555 PF16925 Tetracyclin repressor-like, C-terminal domain SAMA_RS02555 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS02565 PF13533 Biotin-lipoyl like SAMA_RS02580 PF04751 Protein of unknown function (DUF615) SAMA_RS02585 PF01523 Putative modulator of DNA gyrase SAMA_RS02595 PF03889 Alternative ribosome-rescue factor A SAMA_RS02600 PF04055 Radical SAM superfamily SAMA_RS02600 PF18693 TRAM domain SAMA_RS02600 PF00919 Uncharacterized protein family UPF0004 SAMA_RS02610 PF04402 Protein of unknown function (DUF541) SAMA_RS02635 PF01259 SAICAR synthetase SAMA_RS02640 PF00474 Sodium:solute symporter family SAMA_RS02645 PF01022 Bacterial regulatory protein, arsR family SAMA_RS02650 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAMA_RS02650 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SAMA_RS02660 PF11849 Domain of unknown function (DUF3369) SAMA_RS02665 PF10996 Beta-Casp domain SAMA_RS02665 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SAMA_RS02665 PF00753 Metallo-beta-lactamase superfamily SAMA_RS02675 PF13419 Haloacid dehalogenase-like hydrolase SAMA_RS02690 PF00245 Alkaline phosphatase SAMA_RS02710 PF00849 RNA pseudouridylate synthase SAMA_RS02730 PF03741 Integral membrane protein TerC family SAMA_RS02735 PF00753 Metallo-beta-lactamase superfamily SAMA_RS02735 PF14864 Alkyl sulfatase C-terminal SAMA_RS02735 PF14863 Alkyl sulfatase dimerisation SAMA_RS02740 PF03880 DbpA RNA binding domain SAMA_RS02740 PF00270 DEAD/DEAH box helicase SAMA_RS02740 PF00271 Helicase conserved C-terminal domain SAMA_RS02745 PF04389 Peptidase family M28 SAMA_RS02750 PF17755 UvrA DNA-binding domain SAMA_RS02750 PF17760 UvrA interaction domain SAMA_RS02750 PF00005 ABC transporter SAMA_RS02755 PF07690 Major Facilitator Superfamily SAMA_RS02760 PF00436 Single-strand binding protein family SAMA_RS02770 PF01144 Coenzyme A transferase SAMA_RS02775 PF01144 Coenzyme A transferase SAMA_RS02785 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS02785 PF00593 TonB dependent receptor SAMA_RS02790 PF00072 Response regulator receiver domain SAMA_RS02790 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS02795 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS02800 PF00083 Sugar (and other) transporter SAMA_RS02805 PF07859 alpha/beta hydrolase fold SAMA_RS02815 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SAMA_RS02820 PF00034 Cytochrome c SAMA_RS02835 PF04073 Aminoacyl-tRNA editing domain SAMA_RS02840 PF08447 PAS fold SAMA_RS02840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS02845 PF00107 Zinc-binding dehydrogenase SAMA_RS02845 PF16197 Ketoacyl-synthetase C-terminal extension SAMA_RS02845 PF00109 Beta-ketoacyl synthase, N-terminal domain SAMA_RS02845 PF02801 Beta-ketoacyl synthase, C-terminal domain SAMA_RS02845 PF08240 Alcohol dehydrogenase GroES-like domain SAMA_RS02845 PF08659 KR domain SAMA_RS02845 PF00550 Phosphopantetheine attachment site SAMA_RS02845 PF14765 Polyketide synthase dehydratase SAMA_RS02845 PF00698 Acyl transferase domain SAMA_RS02855 PF01263 Aldose 1-epimerase SAMA_RS02860 PF10509 Galactokinase galactose-binding signature SAMA_RS02860 PF00288 GHMP kinases N terminal domain SAMA_RS02860 PF08544 GHMP kinases C terminal SAMA_RS02865 PF02254 TrkA-N domain SAMA_RS02865 PF00999 Sodium/hydrogen exchanger family SAMA_RS02870 PF02683 Cytochrome C biogenesis protein transmembrane region SAMA_RS02870 PF11412 Disulphide bond corrector protein DsbC SAMA_RS02875 PF03091 CutA1 divalent ion tolerance protein SAMA_RS02880 PF04186 FxsA cytoplasmic membrane protein SAMA_RS02885 PF00069 Protein kinase domain SAMA_RS02895 PF05724 Thiopurine S-methyltransferase (TPMT) SAMA_RS02910 PF00899 ThiF family SAMA_RS02915 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS02915 PF00497 Bacterial extracellular solute-binding proteins, family 3 SAMA_RS02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS02930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS02930 PF00672 HAMP domain SAMA_RS02930 PF12729 Four helix bundle sensory module for signal transduction SAMA_RS02940 PF00672 HAMP domain SAMA_RS02940 PF02743 Cache domain SAMA_RS02940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS02960 PF06280 Fn3-like domain SAMA_RS02960 PF02225 PA domain SAMA_RS02960 PF00082 Subtilase family SAMA_RS02960 PF00746 LPXTG cell wall anchor motif SAMA_RS02990 PF00294 pfkB family carbohydrate kinase SAMA_RS02995 PF07690 Major Facilitator Superfamily SAMA_RS03000 PF17678 Glycosyl hydrolase family 92 N-terminal domain SAMA_RS03000 PF07971 Glycosyl hydrolase family 92 SAMA_RS03005 PF07971 Glycosyl hydrolase family 92 SAMA_RS03005 PF17678 Glycosyl hydrolase family 92 N-terminal domain SAMA_RS03010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SAMA_RS03010 PF00356 Bacterial regulatory proteins, lacI family SAMA_RS03015 PF17820 PDZ domain SAMA_RS03015 PF02163 Peptidase family M50 SAMA_RS03030 PF05175 Methyltransferase small domain SAMA_RS03030 PF08468 Methyltransferase small domain N-terminal SAMA_RS03045 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS03045 PF00563 EAL domain SAMA_RS03045 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS03050 PF00245 Alkaline phosphatase SAMA_RS03055 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SAMA_RS03055 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SAMA_RS03060 PF04452 RNA methyltransferase SAMA_RS03065 PF04231 Endonuclease I SAMA_RS03070 PF10263 SprT-like family SAMA_RS03070 PF17283 SprT-like zinc ribbon domain SAMA_RS03080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS03080 PF03466 LysR substrate binding domain SAMA_RS03085 PF02785 Biotin carboxylase C-terminal domain SAMA_RS03085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SAMA_RS03085 PF00289 Biotin carboxylase, N-terminal domain SAMA_RS03100 PF00563 EAL domain SAMA_RS03100 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS03100 PF13426 PAS domain SAMA_RS03105 PF00009 Elongation factor Tu GTP binding domain SAMA_RS03105 PF03144 Elongation factor Tu domain 2 SAMA_RS03105 PF14492 Elongation Factor G, domain II SAMA_RS03105 PF03764 Elongation factor G, domain IV SAMA_RS03105 PF00679 Elongation factor G C-terminus SAMA_RS03115 PF03466 LysR substrate binding domain SAMA_RS03115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS03140 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS03140 PF07660 Secretin and TonB N terminus short domain SAMA_RS03140 PF00593 TonB dependent receptor SAMA_RS03165 PF00375 Sodium:dicarboxylate symporter family SAMA_RS03180 PF00719 Inorganic pyrophosphatase SAMA_RS03185 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SAMA_RS03190 PF00326 Prolyl oligopeptidase family SAMA_RS03190 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SAMA_RS03195 PF00072 Response regulator receiver domain SAMA_RS03195 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS03205 PF01842 ACT domain SAMA_RS03205 PF00696 Amino acid kinase family SAMA_RS03215 PF01037 Lrp/AsnC ligand binding domain SAMA_RS03220 PF00849 RNA pseudouridylate synthase SAMA_RS03225 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS03250 PF00890 FAD binding domain SAMA_RS03250 PF14537 Cytochrome c3 SAMA_RS03255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAMA_RS03255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAMA_RS03260 PF01738 Dienelactone hydrolase family SAMA_RS03275 PF00883 Cytosol aminopeptidase family, catalytic domain SAMA_RS03275 PF02789 Cytosol aminopeptidase family, N-terminal domain SAMA_RS03280 PF10417 C-terminal domain of 1-Cys peroxiredoxin SAMA_RS03280 PF00578 AhpC/TSA family SAMA_RS03285 PF13192 Thioredoxin domain SAMA_RS03285 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAMA_RS03290 PF00360 Phytochrome region SAMA_RS03290 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS03290 PF00563 EAL domain SAMA_RS03290 PF01590 GAF domain SAMA_RS03305 PF12729 Four helix bundle sensory module for signal transduction SAMA_RS03305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS03305 PF00672 HAMP domain SAMA_RS03335 PF01047 MarR family SAMA_RS03340 PF01266 FAD dependent oxidoreductase SAMA_RS03340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SAMA_RS03345 PF05958 tRNA (Uracil-5-)-methyltransferase SAMA_RS03350 PF00672 HAMP domain SAMA_RS03350 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS03355 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS03355 PF00072 Response regulator receiver domain SAMA_RS03370 PF00082 Subtilase family SAMA_RS03370 PF02225 PA domain SAMA_RS03370 PF13860 FlgD Ig-like domain SAMA_RS03370 PF05922 Peptidase inhibitor I9 SAMA_RS03390 PF01327 Polypeptide deformylase SAMA_RS03395 PF04102 SlyX SAMA_RS03405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SAMA_RS03405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SAMA_RS03410 PF12729 Four helix bundle sensory module for signal transduction SAMA_RS03410 PF00672 HAMP domain SAMA_RS03410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS03415 PF01544 CorA-like Mg2+ transporter protein SAMA_RS03420 PF06062 Uncharacterised protein family (UPF0231) SAMA_RS03425 PF00072 Response regulator receiver domain SAMA_RS03425 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS03430 PF00672 HAMP domain SAMA_RS03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS03430 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SAMA_RS03430 PF07730 Histidine kinase SAMA_RS03435 PF02335 Cytochrome c552 SAMA_RS03440 PF00857 Isochorismatase family SAMA_RS03450 PF00543 Nitrogen regulatory protein P-II SAMA_RS03455 PF00909 Ammonium Transporter Family SAMA_RS03470 PF08447 PAS fold SAMA_RS03470 PF13426 PAS domain SAMA_RS03470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS03485 PF00793 DAHP synthetase I family SAMA_RS03490 PF00005 ABC transporter SAMA_RS03490 PF00664 ABC transporter transmembrane region SAMA_RS03505 PF00175 Oxidoreductase NAD-binding domain SAMA_RS03505 PF00970 Oxidoreductase FAD-binding domain SAMA_RS03520 PF13416 Bacterial extracellular solute-binding protein SAMA_RS03525 PF00528 Binding-protein-dependent transport system inner membrane component SAMA_RS03530 PF00005 ABC transporter SAMA_RS03540 PF04261 Dyp-type peroxidase family SAMA_RS03545 PF01316 Arginine repressor, DNA binding domain SAMA_RS03545 PF02863 Arginine repressor, C-terminal domain SAMA_RS03550 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SAMA_RS03550 PF00056 lactate/malate dehydrogenase, NAD binding domain SAMA_RS03555 PF13533 Biotin-lipoyl like SAMA_RS03560 PF13533 Biotin-lipoyl like SAMA_RS03565 PF00873 AcrB/AcrD/AcrF family SAMA_RS03575 PF01136 Peptidase family U32 SAMA_RS03575 PF12392 Collagenase SAMA_RS03580 PF08000 Bacterial PH domain SAMA_RS03585 PF00593 TonB dependent receptor SAMA_RS03585 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS03600 PF14497 Glutathione S-transferase, C-terminal domain SAMA_RS03600 PF02798 Glutathione S-transferase, N-terminal domain SAMA_RS03610 PF01321 Creatinase/Prolidase N-terminal domain SAMA_RS03610 PF00557 Metallopeptidase family M24 SAMA_RS03615 PF07690 Major Facilitator Superfamily SAMA_RS03620 PF00480 ROK family SAMA_RS03620 PF01047 MarR family SAMA_RS03630 PF00557 Metallopeptidase family M24 SAMA_RS03630 PF01321 Creatinase/Prolidase N-terminal domain SAMA_RS03635 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SAMA_RS03635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SAMA_RS03645 PF04235 Protein of unknown function (DUF418) SAMA_RS03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS03655 PF03466 LysR substrate binding domain SAMA_RS03665 PF01184 GPR1/FUN34/yaaH family SAMA_RS03675 PF00691 OmpA family SAMA_RS03680 PF00691 OmpA family SAMA_RS03680 PF01389 OmpA-like transmembrane domain SAMA_RS03685 PF00072 Response regulator receiver domain SAMA_RS03685 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS03725 PF00263 Bacterial type II and III secretion system protein SAMA_RS03725 PF03958 Bacterial type II/III secretion system short domain SAMA_RS03730 PF00437 Type II/IV secretion system protein SAMA_RS03800 PF00582 Universal stress protein family SAMA_RS03820 PF03734 L,D-transpeptidase catalytic domain SAMA_RS03820 PF17969 L,D-transpeptidase C-terminal domain SAMA_RS03825 PF00158 Sigma-54 interaction domain SAMA_RS03825 PF01590 GAF domain SAMA_RS03835 PF03471 Transporter associated domain SAMA_RS03835 PF00999 Sodium/hydrogen exchanger family SAMA_RS03835 PF02080 TrkA-C domain SAMA_RS03840 PF03279 Bacterial lipid A biosynthesis acyltransferase SAMA_RS03845 PF00294 pfkB family carbohydrate kinase SAMA_RS03845 PF01467 Cytidylyltransferase-like SAMA_RS03870 PF01694 Rhomboid family SAMA_RS03880 PF00085 Thioredoxin SAMA_RS03890 PF00912 Transglycosylase SAMA_RS03895 PF05638 Type VI secretion system effector, Hcp SAMA_RS03910 PF05922 Peptidase inhibitor I9 SAMA_RS03910 PF13860 FlgD Ig-like domain SAMA_RS03910 PF02225 PA domain SAMA_RS03910 PF00082 Subtilase family SAMA_RS03915 PF00141 Peroxidase SAMA_RS03920 PF00892 EamA-like transporter family SAMA_RS03925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SAMA_RS03925 PF00672 HAMP domain SAMA_RS03925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS03925 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS03925 PF01627 Hpt domain SAMA_RS03925 PF00072 Response regulator receiver domain SAMA_RS03930 PF00072 Response regulator receiver domain SAMA_RS03930 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS03945 PF13167 GTP-binding GTPase N-terminal SAMA_RS03945 PF16360 GTP-binding GTPase Middle Region SAMA_RS03945 PF01926 50S ribosome-binding GTPase SAMA_RS03950 PF00271 Helicase conserved C-terminal domain SAMA_RS03950 PF00270 DEAD/DEAH box helicase SAMA_RS03950 PF03880 DbpA RNA binding domain SAMA_RS03960 PF00916 Sulfate permease family SAMA_RS03960 PF01740 STAS domain SAMA_RS03965 PF00326 Prolyl oligopeptidase family SAMA_RS03965 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SAMA_RS03965 PF07676 WD40-like Beta Propeller Repeat SAMA_RS03985 PF02574 Homocysteine S-methyltransferase SAMA_RS03985 PF02310 B12 binding domain SAMA_RS03985 PF02607 B12 binding domain SAMA_RS03985 PF00809 Pterin binding enzyme SAMA_RS03985 PF02965 Vitamin B12 dependent methionine synthase, activation domain SAMA_RS03995 PF00005 ABC transporter SAMA_RS04000 PF01032 FecCD transport family SAMA_RS04005 PF02277 Phosphoribosyltransferase SAMA_RS04010 PF02654 Cobalamin-5-phosphate synthase SAMA_RS04015 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SAMA_RS04020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SAMA_RS04020 PF07685 CobB/CobQ-like glutamine amidotransferase domain SAMA_RS04025 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SAMA_RS04025 PF12557 Cob(I)alamin adenosyltransferase N terminal SAMA_RS04030 PF12729 Four helix bundle sensory module for signal transduction SAMA_RS04030 PF00672 HAMP domain SAMA_RS04030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS04040 PF01225 Mur ligase family, catalytic domain SAMA_RS04040 PF08245 Mur ligase middle domain SAMA_RS04040 PF02875 Mur ligase family, glutamate ligase domain SAMA_RS04045 PF02441 Flavoprotein SAMA_RS04050 PF00156 Phosphoribosyl transferase domain SAMA_RS04055 PF00005 ABC transporter SAMA_RS04060 PF01061 ABC-2 type transporter SAMA_RS04070 PF02569 Pantoate-beta-alanine ligase SAMA_RS04075 PF02548 Ketopantoate hydroxymethyltransferase SAMA_RS04080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SAMA_RS04085 PF01743 Poly A polymerase head domain SAMA_RS04085 PF12627 Probable RNA and SrmB- binding site of polymerase A SAMA_RS04085 PF12626 Polymerase A arginine-rich C-terminus SAMA_RS04090 PF00749 tRNA synthetases class I (E and Q), catalytic domain SAMA_RS04095 PF01258 Prokaryotic dksA/traR C4-type zinc finger SAMA_RS04100 PF03749 Sugar fermentation stimulation protein RE domain SAMA_RS04100 PF17746 SfsA N-terminal OB domain SAMA_RS04105 PF12404 Peptidase SAMA_RS04105 PF00883 Cytosol aminopeptidase family, catalytic domain SAMA_RS04110 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS04110 PF17151 Periplasmic sensor domain SAMA_RS04140 PF00206 Lyase SAMA_RS04140 PF10415 Fumarase C C-terminus SAMA_RS04145 PF08264 Anticodon-binding domain of tRNA SAMA_RS04145 PF10458 Valyl tRNA synthetase tRNA binding arm SAMA_RS04145 PF00133 tRNA synthetases class I (I, L, M and V) SAMA_RS04150 PF04364 DNA polymerase III chi subunit, HolC SAMA_RS04155 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS04155 PF17932 Tetracyclin repressor-like, C-terminal domain SAMA_RS04160 PF12706 Beta-lactamase superfamily domain SAMA_RS04165 PF07722 Peptidase C26 SAMA_RS04170 PF00883 Cytosol aminopeptidase family, catalytic domain SAMA_RS04170 PF02789 Cytosol aminopeptidase family, N-terminal domain SAMA_RS04175 PF03739 Lipopolysaccharide export system permease LptF/LptG SAMA_RS04180 PF03739 Lipopolysaccharide export system permease LptF/LptG SAMA_RS04205 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SAMA_RS04215 PF01145 SPFH domain / Band 7 family SAMA_RS04215 PF15975 Flotillin SAMA_RS04230 PF00578 AhpC/TSA family SAMA_RS04235 PF00271 Helicase conserved C-terminal domain SAMA_RS04235 PF00270 DEAD/DEAH box helicase SAMA_RS04240 PF00563 EAL domain SAMA_RS04240 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS04240 PF13426 PAS domain SAMA_RS04250 PF03441 FAD binding domain of DNA photolyase SAMA_RS04250 PF00875 DNA photolyase SAMA_RS04260 PF00106 short chain dehydrogenase SAMA_RS04300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SAMA_RS04305 PF00206 Lyase SAMA_RS04305 PF10415 Fumarase C C-terminus SAMA_RS04315 PF04545 Sigma-70, region 4 SAMA_RS04315 PF04539 Sigma-70 region 3 SAMA_RS04315 PF04542 Sigma-70 region 2 SAMA_RS04315 PF00140 Sigma-70 factor, region 1.2 SAMA_RS04315 PF03979 Sigma-70 factor, region 1.1 SAMA_RS04315 PF04546 Sigma-70, non-essential region SAMA_RS04320 PF08278 DNA primase DnaG DnaB-binding SAMA_RS04320 PF08275 DNA primase catalytic core, N-terminal domain SAMA_RS04320 PF01807 CHC2 zinc finger SAMA_RS04320 PF10410 DnaB-helicase binding domain of primase SAMA_RS04325 PF09424 Yqey-like protein SAMA_RS04330 PF01165 Ribosomal protein S21 SAMA_RS04335 PF00814 Glycoprotease family SAMA_RS04340 PF02660 Glycerol-3-phosphate acyltransferase SAMA_RS04345 PF02152 Dihydroneopterin aldolase SAMA_RS04350 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SAMA_RS04355 PF02673 Bacitracin resistance protein BacA SAMA_RS04370 PF01966 HD domain SAMA_RS04370 PF12627 Probable RNA and SrmB- binding site of polymerase A SAMA_RS04370 PF01743 Poly A polymerase head domain SAMA_RS04375 PF13401 AAA domain SAMA_RS04375 PF01471 Putative peptidoglycan binding domain SAMA_RS04385 PF03600 Citrate transporter SAMA_RS04395 PF00202 Aminotransferase class-III SAMA_RS04400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SAMA_RS04400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SAMA_RS04405 PF00654 Voltage gated chloride channel SAMA_RS04415 PF01521 Iron-sulphur cluster biosynthesis SAMA_RS04435 PF07676 WD40-like Beta Propeller Repeat SAMA_RS04435 PF04052 TolB amino-terminal domain SAMA_RS04440 PF03702 Anhydro-N-acetylmuramic acid kinase SAMA_RS04445 PF01476 LysM domain SAMA_RS04445 PF01551 Peptidase family M23 SAMA_RS04450 PF00579 tRNA synthetases class I (W and Y) SAMA_RS04460 PF03458 UPF0126 domain SAMA_RS04470 PF03186 CobD/Cbib protein SAMA_RS04475 PF01048 Phosphorylase superfamily SAMA_RS04480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SAMA_RS04480 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAMA_RS04485 PF00310 Glutamine amidotransferases class-II SAMA_RS04485 PF04898 Glutamate synthase central domain SAMA_RS04485 PF01645 Conserved region in glutamate synthase SAMA_RS04485 PF01493 GXGXG motif SAMA_RS04490 PF16199 Radical_SAM C-terminal domain SAMA_RS04490 PF04055 Radical SAM superfamily SAMA_RS04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS04495 PF01627 Hpt domain SAMA_RS04495 PF18415 Histidine kinase receptor ArcB trans-membrane domain SAMA_RS04495 PF00989 PAS fold SAMA_RS04495 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS04495 PF00072 Response regulator receiver domain SAMA_RS04500 PF03466 LysR substrate binding domain SAMA_RS04500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS04510 PF02976 DNA mismatch repair enzyme MutH SAMA_RS04515 PF00293 NUDIX domain SAMA_RS04520 PF02896 PEP-utilising enzyme, TIM barrel domain SAMA_RS04520 PF01590 GAF domain SAMA_RS04520 PF00391 PEP-utilising enzyme, mobile domain SAMA_RS04520 PF05524 PEP-utilising enzyme, N-terminal SAMA_RS04525 PF01925 Sulfite exporter TauE/SafE SAMA_RS04530 PF01790 Prolipoprotein diacylglyceryl transferase SAMA_RS04535 PF00303 Thymidylate synthase SAMA_RS04540 PF06965 Na+/H+ antiporter 1 SAMA_RS04550 PF03466 LysR substrate binding domain SAMA_RS04550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS04555 PF03937 Flavinator of succinate dehydrogenase SAMA_RS04565 PF02910 Fumarate reductase flavoprotein C-term SAMA_RS04565 PF00890 FAD binding domain SAMA_RS04570 PF04542 Sigma-70 region 2 SAMA_RS04570 PF08281 Sigma-70, region 4 SAMA_RS04575 PF03873 Anti sigma-E protein RseA, C-terminal domain SAMA_RS04575 PF03872 Anti sigma-E protein RseA, N-terminal domain SAMA_RS04580 PF17188 MucB/RseB C-terminal domain SAMA_RS04580 PF03888 MucB/RseB N-terminal domain SAMA_RS04590 PF03144 Elongation factor Tu domain 2 SAMA_RS04590 PF00009 Elongation factor Tu GTP binding domain SAMA_RS04590 PF00679 Elongation factor G C-terminus SAMA_RS04590 PF06421 GTP-binding protein LepA C-terminus SAMA_RS04595 PF10502 Signal peptidase, peptidase S26 SAMA_RS04600 PF00035 Double-stranded RNA binding motif SAMA_RS04600 PF14622 Ribonuclease-III-like SAMA_RS04605 PF01926 50S ribosome-binding GTPase SAMA_RS04605 PF07650 KH domain SAMA_RS04610 PF02565 Recombination protein O C terminal SAMA_RS04610 PF11967 Recombination protein O N terminal SAMA_RS04615 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SAMA_RS04620 PF01648 4'-phosphopantetheinyl transferase superfamily SAMA_RS04630 PF00571 CBS domain SAMA_RS04630 PF01595 Cyclin M transmembrane N-terminal domain SAMA_RS04630 PF03471 Transporter associated domain SAMA_RS04635 PF01578 Cytochrome C assembly protein SAMA_RS04640 PF00448 SRP54-type protein, GTPase domain SAMA_RS04640 PF02881 SRP54-type protein, helical bundle domain SAMA_RS04640 PF02978 Signal peptide binding domain SAMA_RS04645 PF00886 Ribosomal protein S16 SAMA_RS04650 PF05239 PRC-barrel domain SAMA_RS04650 PF01782 RimM N-terminal domain SAMA_RS04655 PF01746 tRNA (Guanine-1)-methyltransferase SAMA_RS04660 PF01245 Ribosomal protein L19 SAMA_RS04665 PF00793 DAHP synthetase I family SAMA_RS04670 PF01817 Chorismate mutase type II SAMA_RS04670 PF02153 Prephenate dehydrogenase SAMA_RS04675 PF03063 Prismane/CO dehydrogenase family SAMA_RS04680 PF00970 Oxidoreductase FAD-binding domain SAMA_RS04680 PF00175 Oxidoreductase NAD-binding domain SAMA_RS04680 PF00111 2Fe-2S iron-sulfur cluster binding domain SAMA_RS04690 PF00800 Prephenate dehydratase SAMA_RS04690 PF01817 Chorismate mutase type II SAMA_RS04695 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SAMA_RS04705 PF01322 Cytochrome C' SAMA_RS04710 PF01371 Trp repressor protein SAMA_RS04720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SAMA_RS04725 PF13840 ACT domain SAMA_RS04725 PF00696 Amino acid kinase family SAMA_RS04725 PF03447 Homoserine dehydrogenase, NAD binding domain SAMA_RS04725 PF00742 Homoserine dehydrogenase SAMA_RS04725 PF01842 ACT domain SAMA_RS04730 PF00288 GHMP kinases N terminal domain SAMA_RS04730 PF08544 GHMP kinases C terminal SAMA_RS04735 PF00291 Pyridoxal-phosphate dependent enzyme SAMA_RS04735 PF14821 Threonine synthase N terminus SAMA_RS04740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS04740 PF00072 Response regulator receiver domain SAMA_RS04740 PF13426 PAS domain SAMA_RS04745 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS04745 PF00072 Response regulator receiver domain SAMA_RS04760 PF00342 Phosphoglucose isomerase SAMA_RS04765 PF00923 Transaldolase/Fructose-6-phosphate aldolase SAMA_RS04775 PF05736 OprF membrane domain SAMA_RS04775 PF00691 OmpA family SAMA_RS04780 PF09363 XFP C-terminal domain SAMA_RS04780 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SAMA_RS04780 PF09364 XFP N-terminal domain SAMA_RS04785 PF01235 Sodium:alanine symporter family SAMA_RS04790 PF03883 Peroxide stress protein YaaA SAMA_RS04800 PF04389 Peptidase family M28 SAMA_RS04800 PF02225 PA domain SAMA_RS04805 PF01022 Bacterial regulatory protein, arsR family SAMA_RS04810 PF01649 Ribosomal protein S20 SAMA_RS04815 PF03023 Lipid II flippase MurJ SAMA_RS04820 PF06574 FAD synthetase SAMA_RS04820 PF01687 Riboflavin kinase SAMA_RS04825 PF06827 Zinc finger found in FPG and IleRS SAMA_RS04825 PF08264 Anticodon-binding domain of tRNA SAMA_RS04825 PF00133 tRNA synthetases class I (I, L, M and V) SAMA_RS04830 PF01252 Signal peptidase (SPase) II SAMA_RS04835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SAMA_RS04840 PF02401 LytB protein SAMA_RS04860 PF05567 Neisseria PilC beta-propeller domain SAMA_RS04870 PF00114 Pilin (bacterial filament) SAMA_RS04870 PF07963 Prokaryotic N-terminal methylation motif SAMA_RS04875 PF00114 Pilin (bacterial filament) SAMA_RS04875 PF07963 Prokaryotic N-terminal methylation motif SAMA_RS04880 PF00543 Nitrogen regulatory protein P-II SAMA_RS04885 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAMA_RS04890 PF00356 Bacterial regulatory proteins, lacI family SAMA_RS04900 PF04820 Tryptophan halogenase SAMA_RS04915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS04915 PF00672 HAMP domain SAMA_RS04915 PF02743 Cache domain SAMA_RS04920 PF03173 Putative carbohydrate binding domain SAMA_RS04920 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain SAMA_RS04920 PF00728 Glycosyl hydrolase family 20, catalytic domain SAMA_RS04920 PF02838 Glycosyl hydrolase family 20, domain 2 SAMA_RS04925 PF01869 BadF/BadG/BcrA/BcrD ATPase family SAMA_RS04930 PF01380 SIS domain SAMA_RS04935 PF01979 Amidohydrolase family SAMA_RS04945 PF07690 Major Facilitator Superfamily SAMA_RS04960 PF01292 Prokaryotic cytochrome b561 SAMA_RS04965 PF04264 YceI-like domain SAMA_RS04970 PF01272 Transcription elongation factor, GreA/GreB, C-term SAMA_RS04970 PF03449 Transcription elongation factor, N-terminal SAMA_RS04975 PF01985 CRS1 / YhbY (CRM) domain SAMA_RS04980 PF01728 FtsJ-like methyltransferase SAMA_RS04985 PF00004 ATPase family associated with various cellular activities (AAA) SAMA_RS04985 PF17862 AAA+ lid domain SAMA_RS04985 PF01434 Peptidase family M41 SAMA_RS04985 PF06480 FtsH Extracellular SAMA_RS04990 PF00809 Pterin binding enzyme SAMA_RS04995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SAMA_RS04995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SAMA_RS04995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SAMA_RS04995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SAMA_RS05000 PF00121 Triosephosphate isomerase SAMA_RS05005 PF03840 Preprotein translocase SecG subunit SAMA_RS05020 PF02576 RimP N-terminal domain SAMA_RS05020 PF17384 RimP C-terminal SH3 domain SAMA_RS05025 PF00575 S1 RNA binding domain SAMA_RS05025 PF08529 NusA N-terminal domain SAMA_RS05025 PF13184 NusA-like KH domain SAMA_RS05030 PF04760 Translation initiation factor IF-2, N-terminal region SAMA_RS05030 PF08364 Bacterial translation initiation factor IF-2 associated region SAMA_RS05030 PF11987 Translation-initiation factor 2 SAMA_RS05030 PF00009 Elongation factor Tu GTP binding domain SAMA_RS05035 PF02033 Ribosome-binding factor A SAMA_RS05040 PF09157 Pseudouridine synthase II TruB, C-terminal SAMA_RS05040 PF01509 TruB family pseudouridylate synthase (N terminal domain) SAMA_RS05040 PF16198 tRNA pseudouridylate synthase B C-terminal domain SAMA_RS05045 PF00312 Ribosomal protein S15 SAMA_RS05050 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS05050 PF00563 EAL domain SAMA_RS05050 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS05055 PF00013 KH domain SAMA_RS05055 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SAMA_RS05055 PF01138 3' exoribonuclease family, domain 1 SAMA_RS05055 PF03725 3' exoribonuclease family, domain 2 SAMA_RS05055 PF00575 S1 RNA binding domain SAMA_RS05060 PF07719 Tetratricopeptide repeat SAMA_RS05060 PF13181 Tetratricopeptide repeat SAMA_RS05065 PF00009 Elongation factor Tu GTP binding domain SAMA_RS05065 PF03144 Elongation factor Tu domain 2 SAMA_RS05065 PF16658 Class II release factor RF3, C-terminal domain SAMA_RS05070 PF01026 TatD related DNase SAMA_RS05075 PF07662 Na+ dependent nucleoside transporter C-terminus SAMA_RS05075 PF07670 Nucleoside recognition SAMA_RS05075 PF01773 Na+ dependent nucleoside transporter N-terminus SAMA_RS05080 PF03502 Nucleoside-specific channel-forming protein, Tsx SAMA_RS05085 PF01791 DeoC/LacD family aldolase SAMA_RS05090 PF02885 Glycosyl transferase family, helical bundle domain SAMA_RS05090 PF00591 Glycosyl transferase family, a/b domain SAMA_RS05090 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SAMA_RS05095 PF01676 Metalloenzyme superfamily SAMA_RS05100 PF01048 Phosphorylase superfamily SAMA_RS05110 PF18429 Domain of unknown function (DUF5609) SAMA_RS05125 PF18073 Rubredoxin metal binding domain SAMA_RS05130 PF07238 PilZ domain SAMA_RS05135 PF00072 Response regulator receiver domain SAMA_RS05135 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS05140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SAMA_RS05145 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS05145 PF00072 Response regulator receiver domain SAMA_RS05145 PF01627 Hpt domain SAMA_RS05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS05145 PF00672 HAMP domain SAMA_RS05150 PF02613 Nitrate reductase delta subunit SAMA_RS05155 PF01568 Molydopterin dinucleotide binding domain SAMA_RS05155 PF18364 Molybdopterin oxidoreductase N-terminal domain SAMA_RS05155 PF00384 Molybdopterin oxidoreductase SAMA_RS05160 PF03264 NapC/NirT cytochrome c family, N-terminal region SAMA_RS05170 PF00571 CBS domain SAMA_RS05190 PF07670 Nucleoside recognition SAMA_RS05195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS05195 PF08447 PAS fold SAMA_RS05205 PF01136 Peptidase family U32 SAMA_RS05210 PF01136 Peptidase family U32 SAMA_RS05215 PF02036 SCP-2 sterol transfer family SAMA_RS05230 PF00037 4Fe-4S binding domain SAMA_RS05240 PF01136 Peptidase family U32 SAMA_RS05240 PF16325 Peptidase family U32 C-terminal domain SAMA_RS05250 PF00563 EAL domain SAMA_RS05250 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS05250 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS05255 PF03061 Thioesterase superfamily SAMA_RS05285 PF00005 ABC transporter SAMA_RS05285 PF12848 ABC transporter SAMA_RS05290 PF00464 Serine hydroxymethyltransferase SAMA_RS05295 PF03477 ATP cone domain SAMA_RS05300 PF01872 RibD C-terminal domain SAMA_RS05300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SAMA_RS05305 PF00677 Lumazine binding domain SAMA_RS05310 PF00925 GTP cyclohydrolase II SAMA_RS05310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SAMA_RS05315 PF00885 6,7-dimethyl-8-ribityllumazine synthase SAMA_RS05320 PF01029 NusB family SAMA_RS05325 PF02769 AIR synthase related protein, C-terminal domain SAMA_RS05325 PF00586 AIR synthase related protein, N-terminal domain SAMA_RS05330 PF04608 Phosphatidylglycerophosphatase A SAMA_RS05340 PF16200 C-terminal region of band_7 SAMA_RS05340 PF01145 SPFH domain / Band 7 family SAMA_RS05345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SAMA_RS05345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SAMA_RS05345 PF00205 Thiamine pyrophosphate enzyme, central domain SAMA_RS05350 PF02463 RecF/RecN/SMC N terminal domain SAMA_RS05360 PF03466 LysR substrate binding domain SAMA_RS05360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS05370 PF04222 Protein of unknown function (DUF416) SAMA_RS05375 PF00672 HAMP domain SAMA_RS05375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS05375 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS05375 PF01627 Hpt domain SAMA_RS05375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SAMA_RS05375 PF00072 Response regulator receiver domain SAMA_RS05380 PF01938 TRAM domain SAMA_RS05380 PF05958 tRNA (Uracil-5-)-methyltransferase SAMA_RS05385 PF04607 Region found in RelA / SpoT proteins SAMA_RS05385 PF02824 TGS domain SAMA_RS05385 PF13291 ACT domain SAMA_RS05390 PF03819 MazG nucleotide pyrophosphohydrolase domain SAMA_RS05395 PF00117 Glutamine amidotransferase class-I SAMA_RS05395 PF06418 CTP synthase N-terminus SAMA_RS05400 PF03952 Enolase, N-terminal domain SAMA_RS05400 PF00113 Enolase, C-terminal TIM barrel domain SAMA_RS05405 PF04977 Septum formation initiator SAMA_RS05410 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SAMA_RS05415 PF02542 YgbB family SAMA_RS05420 PF01142 tRNA pseudouridine synthase D (TruD) SAMA_RS05425 PF01975 Survival protein SurE SAMA_RS05435 PF01476 LysM domain SAMA_RS05435 PF01551 Peptidase family M23 SAMA_RS05440 PF00140 Sigma-70 factor, region 1.2 SAMA_RS05440 PF04542 Sigma-70 region 2 SAMA_RS05440 PF04545 Sigma-70, region 4 SAMA_RS05440 PF04539 Sigma-70 region 3 SAMA_RS05445 PF05190 MutS family domain IV SAMA_RS05445 PF00488 MutS domain V SAMA_RS05445 PF05188 MutS domain II SAMA_RS05445 PF05192 MutS domain III SAMA_RS05445 PF01624 MutS domain I SAMA_RS05450 PF00154 recA bacterial DNA recombination protein SAMA_RS05455 PF02631 RecX family SAMA_RS05460 PF02272 DHHA1 domain SAMA_RS05460 PF01411 tRNA synthetases class II (A) SAMA_RS05460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SAMA_RS05465 PF01842 ACT domain SAMA_RS05465 PF13840 ACT domain SAMA_RS05465 PF00696 Amino acid kinase family SAMA_RS05470 PF02599 Global regulator protein family SAMA_RS05520 PF00364 Biotin-requiring enzyme SAMA_RS05520 PF00682 HMGL-like SAMA_RS05520 PF02436 Conserved carboxylase domain SAMA_RS05525 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SAMA_RS05535 PF00375 Sodium:dicarboxylate symporter family SAMA_RS05540 PF09335 SNARE associated Golgi protein SAMA_RS05545 PF00675 Insulinase (Peptidase family M16) SAMA_RS05545 PF05193 Peptidase M16 inactive domain SAMA_RS05550 PF04262 Glutamate-cysteine ligase SAMA_RS05570 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS05575 PF02222 ATP-grasp domain SAMA_RS05575 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SAMA_RS05580 PF00731 AIR carboxylase SAMA_RS05585 PF07995 Glucose / Sorbosone dehydrogenase SAMA_RS05595 PF01740 STAS domain SAMA_RS05595 PF00916 Sulfate permease family SAMA_RS05615 PF00072 Response regulator receiver domain SAMA_RS05620 PF04381 Putative exonuclease, RdgC SAMA_RS05625 PF00267 Gram-negative porin SAMA_RS05630 PF00072 Response regulator receiver domain SAMA_RS05630 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS05635 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS05635 PF00989 PAS fold SAMA_RS05635 PF11808 Phosphate regulon sensor protein PhoR SAMA_RS05640 PF12849 PBP superfamily domain SAMA_RS05645 PF01752 Collagenase SAMA_RS05645 PF08453 Peptidase family M9 N-terminal SAMA_RS05650 PF01433 Peptidase family M1 domain SAMA_RS05660 PF00255 Glutathione peroxidase SAMA_RS05665 PF01769 Divalent cation transporter SAMA_RS05665 PF03448 MgtE intracellular N domain SAMA_RS05665 PF00571 CBS domain SAMA_RS05680 PF00563 EAL domain SAMA_RS05680 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS05680 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS05690 PF01189 16S rRNA methyltransferase RsmB/F SAMA_RS05690 PF01029 NusB family SAMA_RS05695 PF02798 Glutathione S-transferase, N-terminal domain SAMA_RS05695 PF00043 Glutathione S-transferase, C-terminal domain SAMA_RS05705 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS05715 PF03831 PhnA domain SAMA_RS05715 PF08274 PhnA Zinc-Ribbon SAMA_RS05725 PF01557 Fumarylacetoacetate (FAA) hydrolase family SAMA_RS05760 PF00583 Acetyltransferase (GNAT) family SAMA_RS05780 PF00072 Response regulator receiver domain SAMA_RS05780 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS05785 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS05785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS05785 PF00672 HAMP domain SAMA_RS05790 PF00583 Acetyltransferase (GNAT) family SAMA_RS05800 PF00300 Histidine phosphatase superfamily (branch 1) SAMA_RS05805 PF14508 Glycosyl-hydrolase 97 N-terminal SAMA_RS05805 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation SAMA_RS05805 PF10566 Glycoside hydrolase 97 SAMA_RS05830 PF03060 Nitronate monooxygenase SAMA_RS05830 PF00698 Acyl transferase domain SAMA_RS05835 PF08990 Erythronolide synthase docking SAMA_RS05835 PF00109 Beta-ketoacyl synthase, N-terminal domain SAMA_RS05835 PF02801 Beta-ketoacyl synthase, C-terminal domain SAMA_RS05835 PF08659 KR domain SAMA_RS05835 PF00550 Phosphopantetheine attachment site SAMA_RS05835 PF00698 Acyl transferase domain SAMA_RS05835 PF16197 Ketoacyl-synthetase C-terminal extension SAMA_RS05845 PF00109 Beta-ketoacyl synthase, N-terminal domain SAMA_RS05845 PF08240 Alcohol dehydrogenase GroES-like domain SAMA_RS05845 PF00107 Zinc-binding dehydrogenase SAMA_RS05845 PF02801 Beta-ketoacyl synthase, C-terminal domain SAMA_RS05845 PF00698 Acyl transferase domain SAMA_RS05845 PF16197 Ketoacyl-synthetase C-terminal extension SAMA_RS05845 PF08659 KR domain SAMA_RS05845 PF14765 Polyketide synthase dehydratase SAMA_RS05845 PF00550 Phosphopantetheine attachment site SAMA_RS05860 PF00009 Elongation factor Tu GTP binding domain SAMA_RS05860 PF14492 Elongation Factor G, domain II SAMA_RS05860 PF03764 Elongation factor G, domain IV SAMA_RS05860 PF00679 Elongation factor G C-terminus SAMA_RS05865 PF01648 4'-phosphopantetheinyl transferase superfamily SAMA_RS05870 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term SAMA_RS05870 PF14489 QueF-like protein SAMA_RS05875 PF07348 Syd protein (SUKH-2) SAMA_RS05880 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) SAMA_RS05930 PF00849 RNA pseudouridylate synthase SAMA_RS05935 PF00258 Flavodoxin SAMA_RS05940 PF02378 Phosphotransferase system, EIIC SAMA_RS05940 PF00367 phosphotransferase system, EIIB SAMA_RS05945 PF00551 Formyl transferase SAMA_RS05945 PF01842 ACT domain SAMA_RS05955 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SAMA_RS05955 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS05955 PF14602 Hexapeptide repeat of succinyl-transferase SAMA_RS05960 PF01909 Nucleotidyltransferase domain SAMA_RS05960 PF01966 HD domain SAMA_RS05960 PF01842 ACT domain SAMA_RS05960 PF08335 GlnD PII-uridylyltransferase SAMA_RS05965 PF00557 Metallopeptidase family M24 SAMA_RS05970 PF00318 Ribosomal protein S2 SAMA_RS05975 PF00889 Elongation factor TS SAMA_RS05980 PF00696 Amino acid kinase family SAMA_RS05985 PF01765 Ribosome recycling factor SAMA_RS05990 PF01255 Putative undecaprenyl diphosphate synthase SAMA_RS06000 PF13288 DXP reductoisomerase C-terminal domain SAMA_RS06000 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SAMA_RS06000 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SAMA_RS06005 PF17820 PDZ domain SAMA_RS06005 PF02163 Peptidase family M50 SAMA_RS06010 PF07244 Surface antigen variable number repeat SAMA_RS06010 PF01103 Surface antigen SAMA_RS06015 PF03938 Outer membrane protein (OmpH-like) SAMA_RS06020 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS06020 PF14602 Hexapeptide repeat of succinyl-transferase SAMA_RS06020 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SAMA_RS06025 PF07977 FabA-like domain SAMA_RS06030 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SAMA_RS06030 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS06035 PF02684 Lipid-A-disaccharide synthetase SAMA_RS06040 PF01351 Ribonuclease HII SAMA_RS06045 PF14579 Helix-hairpin-helix motif SAMA_RS06045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SAMA_RS06045 PF07733 Bacterial DNA polymerase III alpha NTPase domain SAMA_RS06045 PF01336 OB-fold nucleic acid binding domain SAMA_RS06045 PF02811 PHP domain SAMA_RS06050 PF09179 TilS substrate binding domain SAMA_RS06050 PF11734 TilS substrate C-terminal domain SAMA_RS06050 PF01171 PP-loop family SAMA_RS06060 PF07478 D-ala D-ala ligase C-terminus SAMA_RS06060 PF01820 D-ala D-ala ligase N-terminus SAMA_RS06065 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS06070 PF00999 Sodium/hydrogen exchanger family SAMA_RS06070 PF02080 TrkA-C domain SAMA_RS06070 PF02254 TrkA-N domain SAMA_RS06080 PF04073 Aminoacyl-tRNA editing domain SAMA_RS06080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SAMA_RS06080 PF03129 Anticodon binding domain SAMA_RS06090 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS06095 PF01980 tRNA-methyltransferase O SAMA_RS06095 PF18389 TrmO C-terminal domain SAMA_RS06105 PF01979 Amidohydrolase family SAMA_RS06110 PF01979 Amidohydrolase family SAMA_RS06115 PF00816 H-NS histone family SAMA_RS06130 PF01012 Electron transfer flavoprotein domain SAMA_RS06135 PF01012 Electron transfer flavoprotein domain SAMA_RS06135 PF00766 Electron transfer flavoprotein FAD-binding domain SAMA_RS06140 PF03553 Na+/H+ antiporter family SAMA_RS06145 PF01432 Peptidase family M3 SAMA_RS06150 PF00265 Thymidine kinase SAMA_RS06155 PF00120 Glutamine synthetase, catalytic domain SAMA_RS06160 PF02028 BCCT, betaine/carnitine/choline family transporter SAMA_RS06165 PF01844 HNH endonuclease SAMA_RS06170 PF00854 POT family SAMA_RS06195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SAMA_RS06195 PF00108 Thiolase, N-terminal domain SAMA_RS06200 PF00561 alpha/beta hydrolase fold SAMA_RS06205 PF00501 AMP-binding enzyme SAMA_RS06210 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family SAMA_RS06220 PF13732 Domain of unknown function (DUF4162) SAMA_RS06220 PF00005 ABC transporter SAMA_RS06230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SAMA_RS06230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SAMA_RS06230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SAMA_RS06230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SAMA_RS06250 PF08220 DeoR-like helix-turn-helix domain SAMA_RS06250 PF00455 DeoR C terminal sensor domain SAMA_RS06255 PF10518 TAT (twin-arginine translocation) pathway signal sequence SAMA_RS06255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SAMA_RS06260 PF08013 Tagatose 6 phosphate kinase SAMA_RS06265 PF01380 SIS domain SAMA_RS06270 PF00480 ROK family SAMA_RS06275 PF01979 Amidohydrolase family SAMA_RS06280 PF07690 Major Facilitator Superfamily SAMA_RS06285 PF00282 Pyridoxal-dependent decarboxylase conserved domain SAMA_RS06290 PF02868 Thermolysin metallopeptidase, alpha-helical domain SAMA_RS06290 PF07504 Fungalysin/Thermolysin Propeptide Motif SAMA_RS06290 PF03413 Peptidase propeptide and YPEB domain SAMA_RS06290 PF01447 Thermolysin metallopeptidase, catalytic domain SAMA_RS06295 PF00563 EAL domain SAMA_RS06295 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS06295 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS06310 PF14521 Lysine-specific metallo-endopeptidase SAMA_RS06315 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB SAMA_RS06320 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SAMA_RS06345 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB SAMA_RS06350 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SAMA_RS06360 PF07670 Nucleoside recognition SAMA_RS06360 PF07664 Ferrous iron transport protein B C terminus SAMA_RS06360 PF02421 Ferrous iron transport protein B SAMA_RS06365 PF00749 tRNA synthetases class I (E and Q), catalytic domain SAMA_RS06365 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SAMA_RS06370 PF04893 Yip1 domain SAMA_RS06375 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) SAMA_RS06380 PF00149 Calcineurin-like phosphoesterase SAMA_RS06385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SAMA_RS06390 PF01406 tRNA synthetases class I (C) catalytic domain SAMA_RS06390 PF09190 DALR domain SAMA_RS06395 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SAMA_RS06395 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SAMA_RS06415 PF05698 Bacterial trigger factor protein (TF) C-terminus SAMA_RS06415 PF05697 Bacterial trigger factor protein (TF) SAMA_RS06415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SAMA_RS06420 PF00574 Clp protease SAMA_RS06425 PF06689 ClpX C4-type zinc finger SAMA_RS06425 PF10431 C-terminal, D2-small domain, of ClpB protein SAMA_RS06425 PF07724 AAA domain (Cdc48 subfamily) SAMA_RS06430 PF02190 ATP-dependent protease La (LON) substrate-binding domain SAMA_RS06430 PF05362 Lon protease (S16) C-terminal proteolytic domain SAMA_RS06430 PF00004 ATPase family associated with various cellular activities (AAA) SAMA_RS06435 PF00216 Bacterial DNA-binding protein SAMA_RS06440 PF13145 PPIC-type PPIASE domain SAMA_RS06445 PF03167 Uracil DNA glycosylase superfamily SAMA_RS06450 PF07055 Enoyl reductase FAD binding domain SAMA_RS06450 PF12241 Trans-2-enoyl-CoA reductase catalytic region SAMA_RS06450 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase SAMA_RS06455 PF00005 ABC transporter SAMA_RS06460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SAMA_RS06460 PF00005 ABC transporter SAMA_RS06465 PF00528 Binding-protein-dependent transport system inner membrane component SAMA_RS06465 PF12911 N-terminal TM domain of oligopeptide transport permease C SAMA_RS06470 PF00528 Binding-protein-dependent transport system inner membrane component SAMA_RS06475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SAMA_RS06480 PF00158 Sigma-54 interaction domain SAMA_RS06480 PF02954 Bacterial regulatory protein, Fis family SAMA_RS06485 PF04012 PspA/IM30 family SAMA_RS06495 PF04024 PspC domain SAMA_RS06500 PF04317 YcjX-like family, DUF463 SAMA_RS06505 PF05128 Domain of unknown function (DUF697) SAMA_RS06510 PF01053 Cys/Met metabolism PLP-dependent enzyme SAMA_RS06515 PF10531 SLBB domain SAMA_RS06525 PF00850 Histone deacetylase domain SAMA_RS06530 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) SAMA_RS06540 PF01925 Sulfite exporter TauE/SafE SAMA_RS06545 PF06733 DEAD_2 SAMA_RS06545 PF13307 Helicase C-terminal domain SAMA_RS06550 PF03104 DNA polymerase family B, exonuclease domain SAMA_RS06550 PF00136 DNA polymerase family B SAMA_RS06560 PF00593 TonB dependent receptor SAMA_RS06560 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS06575 PF01618 MotA/TolQ/ExbB proton channel family SAMA_RS06580 PF01618 MotA/TolQ/ExbB proton channel family SAMA_RS06585 PF02472 Biopolymer transport protein ExbD/TolR SAMA_RS06610 PF05698 Bacterial trigger factor protein (TF) C-terminus SAMA_RS06630 PF01925 Sulfite exporter TauE/SafE SAMA_RS06635 PF12320 Type 5 capsule protein repressor C-terminal domain SAMA_RS06635 PF00149 Calcineurin-like phosphoesterase SAMA_RS06640 PF13476 AAA domain SAMA_RS06650 PF01551 Peptidase family M23 SAMA_RS06650 PF08525 Opacity-associated protein A N-terminal motif SAMA_RS06650 PF01476 LysM domain SAMA_RS06660 PF01863 Protein of unknown function DUF45 SAMA_RS06670 PF00271 Helicase conserved C-terminal domain SAMA_RS06670 PF00270 DEAD/DEAH box helicase SAMA_RS06675 PF01734 Patatin-like phospholipase SAMA_RS06680 PF13597 Anaerobic ribonucleoside-triphosphate reductase SAMA_RS06680 PF03477 ATP cone domain SAMA_RS06690 PF00925 GTP cyclohydrolase II SAMA_RS06700 PF09905 DNA-binding protein VF530 SAMA_RS06705 PF02554 Carbon starvation protein CstA SAMA_RS06710 PF00072 Response regulator receiver domain SAMA_RS06710 PF04397 LytTr DNA-binding domain SAMA_RS06715 PF06580 Histidine kinase SAMA_RS06715 PF07694 5TMR of 5TMR-LYT SAMA_RS06720 PF10678 Protein of unknown function (DUF2492) SAMA_RS06750 PF00459 Inositol monophosphatase family SAMA_RS06755 PF00588 SpoU rRNA Methylase family SAMA_RS06760 PF06426 Serine acetyltransferase, N-terminal SAMA_RS06760 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS06765 PF02082 Transcriptional regulator SAMA_RS06770 PF00266 Aminotransferase class-V SAMA_RS06775 PF01592 NifU-like N terminal domain SAMA_RS06780 PF01521 Iron-sulphur cluster biosynthesis SAMA_RS06785 PF07743 HSCB C-terminal oligomerisation domain SAMA_RS06790 PF00012 Hsp70 protein SAMA_RS06795 PF00111 2Fe-2S iron-sulfur cluster binding domain SAMA_RS06800 PF18030 RimK PreATP-grasp domain SAMA_RS06800 PF08443 RimK-like ATP-grasp domain SAMA_RS06805 PF00334 Nucleoside diphosphate kinase SAMA_RS06815 PF01207 Dihydrouridine synthase (Dus) SAMA_RS06825 PF05114 Protein of unknown function (DUF692) SAMA_RS06835 PF04304 Protein of unknown function (DUF454) SAMA_RS06840 PF00156 Phosphoribosyl transferase domain SAMA_RS06850 PF02575 YbaB/EbfC DNA-binding family SAMA_RS06855 PF13662 Toprim domain SAMA_RS06855 PF02132 RecR protein SAMA_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS06860 PF00183 Hsp90 protein SAMA_RS06865 PF00085 Thioredoxin SAMA_RS06870 PF05191 Adenylate kinase, active site lid SAMA_RS06875 PF00762 Ferrochelatase SAMA_RS06880 PF00294 pfkB family carbohydrate kinase SAMA_RS06890 PF00375 Sodium:dicarboxylate symporter family SAMA_RS06900 PF04996 Succinylarginine dihydrolase SAMA_RS06905 PF01396 Topoisomerase DNA binding C4 zinc finger SAMA_RS06905 PF01131 DNA topoisomerase SAMA_RS06905 PF08272 Topoisomerase I zinc-ribbon-like SAMA_RS06905 PF01751 Toprim domain SAMA_RS06915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS06915 PF03466 LysR substrate binding domain SAMA_RS06920 PF03313 Serine dehydratase alpha chain SAMA_RS06920 PF03315 Serine dehydratase beta chain SAMA_RS06925 PF00933 Glycosyl hydrolase family 3 N terminal domain SAMA_RS06930 PF05728 Uncharacterised protein family (UPF0227) SAMA_RS06935 PF00708 Acylphosphatase SAMA_RS06945 PF00270 DEAD/DEAH box helicase SAMA_RS06945 PF00271 Helicase conserved C-terminal domain SAMA_RS06945 PF03461 TRCF domain SAMA_RS06945 PF02559 CarD-like/TRCF domain SAMA_RS06945 PF17757 UvrB interaction domain SAMA_RS06955 PF02687 FtsX-like permease family SAMA_RS06955 PF12704 MacB-like periplasmic core domain SAMA_RS06960 PF00005 ABC transporter SAMA_RS06965 PF12704 MacB-like periplasmic core domain SAMA_RS06965 PF02687 FtsX-like permease family SAMA_RS06975 PF00753 Metallo-beta-lactamase superfamily SAMA_RS06975 PF03772 Competence protein SAMA_RS06980 PF00664 ABC transporter transmembrane region SAMA_RS06980 PF00005 ABC transporter SAMA_RS06985 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SAMA_RS06990 PF03966 Trm112p-like protein SAMA_RS07000 PF02627 Carboxymuconolactone decarboxylase family SAMA_RS07050 PF00144 Beta-lactamase SAMA_RS07065 PF00589 Phage integrase family SAMA_RS07065 PF13495 Phage integrase, N-terminal SAM-like domain SAMA_RS07075 PF01144 Coenzyme A transferase SAMA_RS07080 PF01144 Coenzyme A transferase SAMA_RS07085 PF00682 HMGL-like SAMA_RS07090 PF00289 Biotin carboxylase, N-terminal domain SAMA_RS07090 PF18140 Propionyl-coenzyme A carboxylase BT domain SAMA_RS07090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SAMA_RS07090 PF02785 Biotin carboxylase C-terminal domain SAMA_RS07090 PF00364 Biotin-requiring enzyme SAMA_RS07100 PF01039 Carboxyl transferase domain SAMA_RS07105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SAMA_RS07105 PF02770 Acyl-CoA dehydrogenase, middle domain SAMA_RS07105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SAMA_RS07110 PF09278 MerR, DNA binding SAMA_RS07110 PF00376 MerR family regulatory protein SAMA_RS07115 PF16177 Acetyl-coenzyme A synthetase N-terminus SAMA_RS07115 PF13193 AMP-binding enzyme C-terminal domain SAMA_RS07115 PF00501 AMP-binding enzyme SAMA_RS07120 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SAMA_RS07120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SAMA_RS07125 PF01040 UbiA prenyltransferase family SAMA_RS07130 PF00106 short chain dehydrogenase SAMA_RS07150 PF03922 OmpW family SAMA_RS07160 PF09619 Type III secretion system lipoprotein chaperone (YscW) SAMA_RS07165 PF04204 Homoserine O-succinyltransferase SAMA_RS07170 PF02803 Thiolase, C-terminal domain SAMA_RS07170 PF00108 Thiolase, N-terminal domain SAMA_RS07175 PF00171 Aldehyde dehydrogenase family SAMA_RS07180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SAMA_RS07180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SAMA_RS07180 PF02770 Acyl-CoA dehydrogenase, middle domain SAMA_RS07185 PF00378 Enoyl-CoA hydratase/isomerase SAMA_RS07190 PF00378 Enoyl-CoA hydratase/isomerase SAMA_RS07195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SAMA_RS07195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SAMA_RS07210 PF00326 Prolyl oligopeptidase family SAMA_RS07215 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS07225 PF00005 ABC transporter SAMA_RS07225 PF12848 ABC transporter SAMA_RS07235 PF03466 LysR substrate binding domain SAMA_RS07235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS07240 PF07681 DoxX SAMA_RS07245 PF17954 Quercetinase C-terminal cupin domain SAMA_RS07245 PF02678 Pirin SAMA_RS07250 PF02525 Flavodoxin-like fold SAMA_RS07255 PF02254 TrkA-N domain SAMA_RS07255 PF00999 Sodium/hydrogen exchanger family SAMA_RS07265 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS07265 PF00593 TonB dependent receptor SAMA_RS07275 PF00722 Glycosyl hydrolases family 16 SAMA_RS07295 PF00356 Bacterial regulatory proteins, lacI family SAMA_RS07305 PF00232 Glycosyl hydrolase family 1 SAMA_RS07310 PF07690 Major Facilitator Superfamily SAMA_RS07315 PF14310 Fibronectin type III-like domain SAMA_RS07315 PF00933 Glycosyl hydrolase family 3 N terminal domain SAMA_RS07315 PF01915 Glycosyl hydrolase family 3 C-terminal domain SAMA_RS07320 PF00480 ROK family SAMA_RS07325 PF00892 EamA-like transporter family SAMA_RS07335 PF00528 Binding-protein-dependent transport system inner membrane component SAMA_RS07340 PF00528 Binding-protein-dependent transport system inner membrane component SAMA_RS07345 PF00005 ABC transporter SAMA_RS07350 PF01895 PhoU domain SAMA_RS07385 PF00158 Sigma-54 interaction domain SAMA_RS07385 PF02954 Bacterial regulatory protein, Fis family SAMA_RS07385 PF00072 Response regulator receiver domain SAMA_RS07390 PF00873 AcrB/AcrD/AcrF family SAMA_RS07395 PF00873 AcrB/AcrD/AcrF family SAMA_RS07400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SAMA_RS07405 PF00285 Citrate synthase, C-terminal domain SAMA_RS07410 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SAMA_RS07415 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SAMA_RS07420 PF02910 Fumarate reductase flavoprotein C-term SAMA_RS07420 PF00890 FAD binding domain SAMA_RS07425 PF13085 2Fe-2S iron-sulfur cluster binding domain SAMA_RS07430 PF00676 Dehydrogenase E1 component SAMA_RS07430 PF16078 2-oxoglutarate dehydrogenase N-terminus SAMA_RS07430 PF02779 Transketolase, pyrimidine binding domain SAMA_RS07430 PF16870 2-oxoglutarate dehydrogenase C-terminal SAMA_RS07435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SAMA_RS07435 PF02817 e3 binding domain SAMA_RS07435 PF00364 Biotin-requiring enzyme SAMA_RS07440 PF00549 CoA-ligase SAMA_RS07440 PF08442 ATP-grasp domain SAMA_RS07445 PF02629 CoA binding domain SAMA_RS07445 PF00549 CoA-ligase SAMA_RS07450 PF03547 Membrane transport protein SAMA_RS07460 PF14760 Rnk N-terminus SAMA_RS07460 PF01272 Transcription elongation factor, GreA/GreB, C-term SAMA_RS07465 PF01475 Ferric uptake regulator family SAMA_RS07470 PF02146 Sir2 family SAMA_RS07480 PF04055 Radical SAM superfamily SAMA_RS07480 PF06968 Biotin and Thiamin Synthesis associated domain SAMA_RS07480 PF00202 Aminotransferase class-III SAMA_RS07485 PF06968 Biotin and Thiamin Synthesis associated domain SAMA_RS07485 PF04055 Radical SAM superfamily SAMA_RS07490 PF00155 Aminotransferase class I and II SAMA_RS07495 PF08241 Methyltransferase domain SAMA_RS07505 PF03575 Peptidase family S51 SAMA_RS07510 PF01435 Peptidase family M48 SAMA_RS07515 PF14537 Cytochrome c3 SAMA_RS07525 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS07535 PF01230 HIT domain SAMA_RS07555 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS07555 PF00593 TonB dependent receptor SAMA_RS07565 PF04973 Nicotinamide mononucleotide transporter SAMA_RS07585 PF00881 Nitroreductase family SAMA_RS07600 PF13302 Acetyltransferase (GNAT) domain SAMA_RS07640 PF00005 ABC transporter SAMA_RS07660 PF12704 MacB-like periplasmic core domain SAMA_RS07660 PF02687 FtsX-like permease family SAMA_RS07690 PF01758 Sodium Bile acid symporter family SAMA_RS07695 PF07027 Protein of unknown function (DUF1318) SAMA_RS07700 PF13617 YnbE-like lipoprotein SAMA_RS07710 PF00202 Aminotransferase class-III SAMA_RS07725 PF13472 GDSL-like Lipase/Acylhydrolase family SAMA_RS07730 PF00005 ABC transporter SAMA_RS07740 PF01370 NAD dependent epimerase/dehydratase family SAMA_RS07740 PF08338 Domain of unknown function (DUF1731) SAMA_RS07745 PF02152 Dihydroneopterin aldolase SAMA_RS07750 PF01594 AI-2E family transporter SAMA_RS07755 PF10672 S-adenosylmethionine-dependent methyltransferase SAMA_RS07755 PF17785 PUA-like domain SAMA_RS07775 PF01515 Phosphate acetyl/butaryl transferase SAMA_RS07775 PF07085 DRTGG domain SAMA_RS07780 PF00871 Acetokinase family SAMA_RS07785 PF04217 Protein of unknown function, DUF412 SAMA_RS07790 PF04055 Radical SAM superfamily SAMA_RS07795 PF01228 Glycine radical SAMA_RS07795 PF02901 Pyruvate formate lyase-like SAMA_RS07805 PF01226 Formate/nitrite transporter SAMA_RS07810 PF03466 LysR substrate binding domain SAMA_RS07810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS07815 PF03606 C4-dicarboxylate anaerobic carrier SAMA_RS07820 PF00593 TonB dependent receptor SAMA_RS07820 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS07835 PF00266 Aminotransferase class-V SAMA_RS07845 PF00291 Pyridoxal-phosphate dependent enzyme SAMA_RS07850 PF06271 RDD family SAMA_RS07855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SAMA_RS07855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SAMA_RS07860 PF00072 Response regulator receiver domain SAMA_RS07860 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS07875 PF02463 RecF/RecN/SMC N terminal domain SAMA_RS07875 PF06470 SMC proteins Flexible Hinge Domain SAMA_RS07880 PF04354 ZipA, C-terminal FtsZ-binding domain SAMA_RS07885 PF00533 BRCA1 C Terminus (BRCT) domain SAMA_RS07885 PF01653 NAD-dependent DNA ligase adenylation domain SAMA_RS07885 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SAMA_RS07885 PF12826 Helix-hairpin-helix motif SAMA_RS07885 PF03120 NAD-dependent DNA ligase OB-fold domain SAMA_RS07890 PF01752 Collagenase SAMA_RS07890 PF08453 Peptidase family M9 N-terminal SAMA_RS07900 PF11871 Domain of unknown function (DUF3391) SAMA_RS07900 PF01966 HD domain SAMA_RS07905 PF01370 NAD dependent epimerase/dehydratase family SAMA_RS07920 PF00474 Sodium:solute symporter family SAMA_RS07930 PF00929 Exonuclease SAMA_RS07940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SAMA_RS07940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SAMA_RS07945 PF00392 Bacterial regulatory proteins, gntR family SAMA_RS07950 PF00171 Aldehyde dehydrogenase family SAMA_RS07955 PF05544 Proline racemase SAMA_RS07960 PF00701 Dihydrodipicolinate synthetase family SAMA_RS07965 PF05544 Proline racemase SAMA_RS07970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS07970 PF01266 FAD dependent oxidoreductase SAMA_RS07970 PF01266 FAD dependent oxidoreductase SAMA_RS07970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS07975 PF00557 Metallopeptidase family M24 SAMA_RS07975 PF05195 Aminopeptidase P, N-terminal domain SAMA_RS08015 PF01544 CorA-like Mg2+ transporter protein SAMA_RS08025 PF01966 HD domain SAMA_RS08035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS08040 PF00072 Response regulator receiver domain SAMA_RS08040 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS08050 PF00005 ABC transporter SAMA_RS08055 PF00528 Binding-protein-dependent transport system inner membrane component SAMA_RS08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS08070 PF00989 PAS fold SAMA_RS08070 PF08447 PAS fold SAMA_RS08070 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS08075 PF00158 Sigma-54 interaction domain SAMA_RS08075 PF00072 Response regulator receiver domain SAMA_RS08075 PF02954 Bacterial regulatory protein, Fis family SAMA_RS08080 PF01810 LysE type translocator SAMA_RS08085 PF12833 Helix-turn-helix domain SAMA_RS08085 PF07883 Cupin domain SAMA_RS08090 PF02540 NAD synthase SAMA_RS08100 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS08100 PF00072 Response regulator receiver domain SAMA_RS08110 PF11893 Domain of unknown function (DUF3413) SAMA_RS08110 PF00884 Sulfatase SAMA_RS08115 PF07208 Protein of unknown function (DUF1414) SAMA_RS08120 PF04245 37-kD nucleoid-associated bacterial protein SAMA_RS08135 PF01551 Peptidase family M23 SAMA_RS08135 PF01476 LysM domain SAMA_RS08135 PF08525 Opacity-associated protein A N-terminal motif SAMA_RS08150 PF02872 5'-nucleotidase, C-terminal domain SAMA_RS08150 PF00149 Calcineurin-like phosphoesterase SAMA_RS08155 PF01432 Peptidase family M3 SAMA_RS08170 PF01810 LysE type translocator SAMA_RS08175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SAMA_RS08180 PF04209 homogentisate 1,2-dioxygenase SAMA_RS08185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS08185 PF03466 LysR substrate binding domain SAMA_RS08220 PF00924 Mechanosensitive ion channel SAMA_RS08225 PF02470 MlaD protein SAMA_RS08230 PF04403 Paraquat-inducible protein A SAMA_RS08235 PF04403 Paraquat-inducible protein A SAMA_RS08240 PF07130 YebG protein SAMA_RS08245 PF13185 GAF domain SAMA_RS08250 PF17516 ProQ C-terminal domain SAMA_RS08250 PF04352 ProQ/FINO family SAMA_RS08255 PF17804 Tail specific protease N-terminal domain SAMA_RS08255 PF11818 C-terminal domain of tail specific protease (DUF3340) SAMA_RS08255 PF00595 PDZ domain SAMA_RS08255 PF03572 Peptidase family S41 SAMA_RS08260 PF01433 Peptidase family M1 domain SAMA_RS08260 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SAMA_RS08260 PF11940 Domain of unknown function (DUF3458) Ig-like fold SAMA_RS08275 PF07044 Protein of unknown function (DUF1329) SAMA_RS08290 PF05088 Bacterial NAD-glutamate dehydrogenase SAMA_RS08295 PF01180 Dihydroorotate dehydrogenase SAMA_RS08300 PF07126 Cell-division protein ZapC SAMA_RS08320 PF00106 short chain dehydrogenase SAMA_RS08345 PF02926 THUMP domain SAMA_RS08345 PF01170 Putative RNA methylase family UPF0020 SAMA_RS08345 PF10672 S-adenosylmethionine-dependent methyltransferase SAMA_RS08355 PF12848 ABC transporter SAMA_RS08355 PF16326 ABC transporter C-terminal domain SAMA_RS08355 PF00005 ABC transporter SAMA_RS08365 PF07977 FabA-like domain SAMA_RS08370 PF13654 AAA domain SAMA_RS08370 PF05362 Lon protease (S16) C-terminal proteolytic domain SAMA_RS08385 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS08385 PF00072 Response regulator receiver domain SAMA_RS08390 PF02151 UvrB/uvrC motif SAMA_RS08390 PF08459 UvrC Helix-hairpin-helix N-terminal SAMA_RS08390 PF01541 GIY-YIG catalytic domain SAMA_RS08395 PF01066 CDP-alcohol phosphatidyltransferase SAMA_RS08425 PF03734 L,D-transpeptidase catalytic domain SAMA_RS08425 PF01471 Putative peptidoglycan binding domain SAMA_RS08430 PF05951 Bacterial protein of unknown function (DUF882) SAMA_RS08435 PF01386 Ribosomal L25p family SAMA_RS08440 PF04357 TamB, inner membrane protein subunit of TAM complex SAMA_RS08445 PF01103 Surface antigen SAMA_RS08445 PF17243 POTRA domain TamA domain 1 SAMA_RS08445 PF07244 Surface antigen variable number repeat SAMA_RS08450 PF01112 Asparaginase SAMA_RS08455 PF00571 CBS domain SAMA_RS08460 PF11898 Domain of unknown function (DUF3418) SAMA_RS08460 PF04408 Helicase associated domain (HA2) SAMA_RS08460 PF00270 DEAD/DEAH box helicase SAMA_RS08460 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SAMA_RS08460 PF00271 Helicase conserved C-terminal domain SAMA_RS08475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SAMA_RS08475 PF01568 Molydopterin dinucleotide binding domain SAMA_RS08475 PF00384 Molybdopterin oxidoreductase SAMA_RS08480 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SAMA_RS08485 PF03264 NapC/NirT cytochrome c family, N-terminal region SAMA_RS08495 PF00171 Aldehyde dehydrogenase family SAMA_RS08500 PF04958 Arginine N-succinyltransferase beta subunit SAMA_RS08505 PF00202 Aminotransferase class-III SAMA_RS08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS08515 PF03466 LysR substrate binding domain SAMA_RS08520 PF00221 Aromatic amino acid lyase SAMA_RS08525 PF01175 Urocanase Rossmann-like domain SAMA_RS08525 PF17392 Urocanase C-terminal domain SAMA_RS08525 PF17391 Urocanase N-terminal domain SAMA_RS08545 PF07516 SecA Wing and Scaffold domain SAMA_RS08545 PF01043 SecA preprotein cross-linking domain SAMA_RS08545 PF07517 SecA DEAD-like domain SAMA_RS08545 PF02810 SEC-C motif SAMA_RS08555 PF00583 Acetyltransferase (GNAT) family SAMA_RS08565 PF02348 Cytidylyltransferase SAMA_RS08570 PF00465 Iron-containing alcohol dehydrogenase SAMA_RS08575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SAMA_RS08580 PF00484 Carbonic anhydrase SAMA_RS08595 PF12697 Alpha/beta hydrolase family SAMA_RS08600 PF02557 D-alanyl-D-alanine carboxypeptidase SAMA_RS08605 PF07687 Peptidase dimerisation domain SAMA_RS08605 PF01546 Peptidase family M20/M25/M40 SAMA_RS08610 PF03960 ArsC family SAMA_RS08615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SAMA_RS08620 PF05524 PEP-utilising enzyme, N-terminal SAMA_RS08620 PF00391 PEP-utilising enzyme, mobile domain SAMA_RS08620 PF02896 PEP-utilising enzyme, TIM barrel domain SAMA_RS08625 PF00381 PTS HPr component phosphorylation site SAMA_RS08635 PF17200 Single Cache domain 2 SAMA_RS08635 PF00672 HAMP domain SAMA_RS08635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS08645 PF00356 Bacterial regulatory proteins, lacI family SAMA_RS08650 PF09137 Glucodextranase, domain N SAMA_RS08650 PF00723 Glycosyl hydrolases family 15 SAMA_RS08655 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SAMA_RS08665 PF16657 Maltogenic Amylase, C-terminal domain SAMA_RS08665 PF02903 Alpha amylase, N-terminal ig-like domain SAMA_RS08665 PF00128 Alpha amylase, catalytic domain SAMA_RS08670 PF00128 Alpha amylase, catalytic domain SAMA_RS08670 PF10438 Cyclo-malto-dextrinase C-terminal domain SAMA_RS08670 PF09087 Cyclomaltodextrinase, N-terminal SAMA_RS08680 PF00128 Alpha amylase, catalytic domain SAMA_RS08685 PF07690 Major Facilitator Superfamily SAMA_RS08690 PF01189 16S rRNA methyltransferase RsmB/F SAMA_RS08690 PF01029 NusB family SAMA_RS08695 PF01894 Uncharacterised protein family UPF0047 SAMA_RS08705 PF18081 Fanconi anemia-associated nuclease SAP domain SAMA_RS08705 PF08774 VRR-NUC domain SAMA_RS08710 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS08715 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SAMA_RS08720 PF02769 AIR synthase related protein, C-terminal domain SAMA_RS08720 PF00586 AIR synthase related protein, N-terminal domain SAMA_RS08725 PF01924 Hydrogenase formation hypA family SAMA_RS08730 PF01455 HupF/HypC family SAMA_RS08735 PF02492 CobW/HypB/UreG, nucleotide-binding domain SAMA_RS08740 PF17788 HypF Kae1-like domain SAMA_RS08740 PF01300 Telomere recombination SAMA_RS08740 PF07503 HypF finger SAMA_RS08740 PF00708 Acylphosphatase SAMA_RS08750 PF01750 Hydrogenase maturation protease SAMA_RS08755 PF01292 Prokaryotic cytochrome b561 SAMA_RS08760 PF00374 Nickel-dependent hydrogenase SAMA_RS08765 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SAMA_RS08765 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SAMA_RS08765 PF10518 TAT (twin-arginine translocation) pathway signal sequence SAMA_RS08770 PF00578 AhpC/TSA family SAMA_RS08785 PF02424 ApbE family SAMA_RS08790 PF01336 OB-fold nucleic acid binding domain SAMA_RS08790 PF00152 tRNA synthetases class II (D, K and N) SAMA_RS08800 PF00293 NUDIX domain SAMA_RS08805 PF00425 chorismate binding enzyme SAMA_RS08805 PF04715 Anthranilate synthase component I, N terminal region SAMA_RS08815 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SAMA_RS08815 PF00326 Prolyl oligopeptidase family SAMA_RS08815 PF07676 WD40-like Beta Propeller Repeat SAMA_RS08825 PF04349 Periplasmic glucan biosynthesis protein, MdoG SAMA_RS08830 PF13506 Glycosyl transferase family 21 SAMA_RS08835 PF00171 Aldehyde dehydrogenase family SAMA_RS08835 PF00465 Iron-containing alcohol dehydrogenase SAMA_RS08840 PF01914 MarC family integral membrane protein SAMA_RS08845 PF01966 HD domain SAMA_RS08845 PF13286 Phosphohydrolase-associated domain SAMA_RS08855 PF00155 Aminotransferase class I and II SAMA_RS08860 PF03553 Na+/H+ antiporter family SAMA_RS08865 PF01132 Elongation factor P (EF-P) OB domain SAMA_RS08865 PF09285 Elongation factor P, C-terminal SAMA_RS08865 PF08207 Elongation factor P (EF-P) KOW-like domain SAMA_RS08875 PF00258 Flavodoxin SAMA_RS08880 PF01402 Ribbon-helix-helix protein, copG family SAMA_RS08890 PF12697 Alpha/beta hydrolase family SAMA_RS08895 PF17206 SeqA protein N-terminal domain SAMA_RS08895 PF03925 SeqA protein C-terminal domain SAMA_RS08900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SAMA_RS08900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SAMA_RS08900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SAMA_RS08900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SAMA_RS08905 PF01625 Peptide methionine sulfoxide reductase SAMA_RS08910 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SAMA_RS08915 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal SAMA_RS08915 PF00676 Dehydrogenase E1 component SAMA_RS08920 PF02779 Transketolase, pyrimidine binding domain SAMA_RS08920 PF02780 Transketolase, C-terminal domain SAMA_RS08925 PF02817 e3 binding domain SAMA_RS08925 PF00364 Biotin-requiring enzyme SAMA_RS08925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SAMA_RS08930 PF02445 Quinolinate synthetase A protein SAMA_RS08935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS08935 PF02743 Cache domain SAMA_RS08935 PF00672 HAMP domain SAMA_RS08945 PF13533 Biotin-lipoyl like SAMA_RS08950 PF00873 AcrB/AcrD/AcrF family SAMA_RS08960 PF00072 Response regulator receiver domain SAMA_RS08960 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS08965 PF00246 Zinc carboxypeptidase SAMA_RS08965 PF18027 Cytosolic carboxypeptidase N-terminal domain SAMA_RS08975 PF07023 Protein of unknown function (DUF1315) SAMA_RS08980 PF00710 Asparaginase, N-terminal SAMA_RS08980 PF17763 Glutaminase/Asparaginase C-terminal domain SAMA_RS08985 PF01343 Peptidase family S49 SAMA_RS08990 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAMA_RS08990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SAMA_RS09000 PF00111 2Fe-2S iron-sulfur cluster binding domain SAMA_RS09005 PF00268 Ribonucleotide reductase, small chain SAMA_RS09010 PF03477 ATP cone domain SAMA_RS09010 PF02867 Ribonucleotide reductase, barrel domain SAMA_RS09010 PF00317 Ribonucleotide reductase, all-alpha domain SAMA_RS09015 PF13419 Haloacid dehalogenase-like hydrolase SAMA_RS09025 PF03989 DNA gyrase C-terminal domain, beta-propeller SAMA_RS09025 PF00521 DNA gyrase/topoisomerase IV, subunit A SAMA_RS09030 PF00266 Aminotransferase class-V SAMA_RS09035 PF00155 Aminotransferase class I and II SAMA_RS09040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SAMA_RS09045 PF02224 Cytidylate kinase SAMA_RS09050 PF00575 S1 RNA binding domain SAMA_RS09055 PF00216 Bacterial DNA-binding protein SAMA_RS09060 PF06305 Lipopolysaccharide assembly protein A domain SAMA_RS09065 PF18073 Rubredoxin metal binding domain SAMA_RS09070 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SAMA_RS09080 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) SAMA_RS09085 PF12806 Acetyl-CoA dehydrogenase C-terminal like SAMA_RS09085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SAMA_RS09085 PF02770 Acyl-CoA dehydrogenase, middle domain SAMA_RS09085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SAMA_RS09090 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SAMA_RS09105 PF13091 PLD-like domain SAMA_RS09110 PF03942 DTW domain SAMA_RS09140 PF00588 SpoU rRNA Methylase family SAMA_RS09145 PF03974 Ecotin SAMA_RS09155 PF01047 MarR family SAMA_RS09160 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SAMA_RS09160 PF00326 Prolyl oligopeptidase family SAMA_RS09165 PF08019 Phosphoethanolamine transferase EptA/EptB SAMA_RS09165 PF00884 Sulfatase SAMA_RS09170 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS09175 PF13607 Succinyl-CoA ligase like flavodoxin domain SAMA_RS09175 PF13380 CoA binding domain SAMA_RS09175 PF00583 Acetyltransferase (GNAT) family SAMA_RS09190 PF01554 MatE SAMA_RS09195 PF00677 Lumazine binding domain SAMA_RS09210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SAMA_RS09210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SAMA_RS09210 PF02824 TGS domain SAMA_RS09210 PF03129 Anticodon binding domain SAMA_RS09215 PF00707 Translation initiation factor IF-3, C-terminal domain SAMA_RS09215 PF05198 Translation initiation factor IF-3, N-terminal domain SAMA_RS09220 PF01632 Ribosomal protein L35 SAMA_RS09225 PF00453 Ribosomal protein L20 SAMA_RS09230 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAMA_RS09235 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SAMA_RS09235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SAMA_RS09240 PF01037 Lrp/AsnC ligand binding domain SAMA_RS09245 PF01580 FtsK/SpoIIIE family SAMA_RS09245 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SAMA_RS09245 PF09397 Ftsk gamma domain SAMA_RS09245 PF17854 FtsK alpha domain SAMA_RS09250 PF03548 Outer membrane lipoprotein carrier protein LolA SAMA_RS09255 PF12002 MgsA AAA+ ATPase C terminal SAMA_RS09255 PF16193 AAA C-terminal domain SAMA_RS09255 PF00004 ATPase family associated with various cellular activities (AAA) SAMA_RS09260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SAMA_RS09265 PF02403 Seryl-tRNA synthetase N-terminal domain SAMA_RS09265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SAMA_RS09270 PF04358 DsrC like protein SAMA_RS09280 PF02635 DsrE/DsrF-like family SAMA_RS09285 PF02635 DsrE/DsrF-like family SAMA_RS09290 PF01027 Inhibitor of apoptosis-promoting Bax1 SAMA_RS09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS09295 PF03466 LysR substrate binding domain SAMA_RS09300 PF07690 Major Facilitator Superfamily SAMA_RS09305 PF00376 MerR family regulatory protein SAMA_RS09305 PF09278 MerR, DNA binding SAMA_RS09310 PF00403 Heavy-metal-associated domain SAMA_RS09325 PF11849 Domain of unknown function (DUF3369) SAMA_RS09340 PF00115 Cytochrome C and Quinol oxidase polypeptide I SAMA_RS09355 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SAMA_RS09355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SAMA_RS09365 PF00403 Heavy-metal-associated domain SAMA_RS09380 PF13545 Crp-like helix-turn-helix domain SAMA_RS09380 PF00027 Cyclic nucleotide-binding domain SAMA_RS09385 PF00582 Universal stress protein family SAMA_RS09390 PF01171 PP-loop family SAMA_RS09400 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SAMA_RS09405 PF01933 Uncharacterised protein family UPF0052 SAMA_RS09410 PF00155 Aminotransferase class I and II SAMA_RS09425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SAMA_RS09425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAMA_RS09435 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAMA_RS09435 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SAMA_RS09440 PF01081 KDPG and KHG aldolase SAMA_RS09445 PF00920 Dehydratase family SAMA_RS09450 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SAMA_RS09455 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SAMA_RS09455 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SAMA_RS09460 PF01418 Helix-turn-helix domain, rpiR family SAMA_RS09460 PF01380 SIS domain SAMA_RS09465 PF00224 Pyruvate kinase, barrel domain SAMA_RS09465 PF02887 Pyruvate kinase, alpha/beta domain SAMA_RS09470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SAMA_RS09470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SAMA_RS09470 PF09317 Domain of unknown function (DUF1974) SAMA_RS09470 PF02770 Acyl-CoA dehydrogenase, middle domain SAMA_RS09475 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS09495 PF02810 SEC-C motif SAMA_RS09500 PF00563 EAL domain SAMA_RS09500 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS09500 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS09530 PF00291 Pyridoxal-phosphate dependent enzyme SAMA_RS09535 PF04055 Radical SAM superfamily SAMA_RS09540 PF06508 Queuosine biosynthesis protein QueC SAMA_RS09550 PF04851 Type III restriction enzyme, res subunit SAMA_RS09550 PF00271 Helicase conserved C-terminal domain SAMA_RS09550 PF02151 UvrB/uvrC motif SAMA_RS09550 PF12344 Ultra-violet resistance protein B SAMA_RS09550 PF17757 UvrB interaction domain SAMA_RS09585 PF02508 Rnf-Nqr subunit, membrane protein SAMA_RS09590 PF04060 Putative Fe-S cluster SAMA_RS09595 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SAMA_RS09595 PF10531 SLBB domain SAMA_RS09595 PF13375 RnfC Barrel sandwich hybrid domain SAMA_RS09595 PF12838 4Fe-4S dicluster domain SAMA_RS09600 PF03116 NQR2, RnfD, RnfE family SAMA_RS09605 PF04205 FMN-binding domain SAMA_RS09610 PF02508 Rnf-Nqr subunit, membrane protein SAMA_RS09615 PF10576 Iron-sulfur binding domain of endonuclease III SAMA_RS09615 PF00633 Helix-hairpin-helix motif SAMA_RS09615 PF00730 HhH-GPD superfamily base excision DNA repair protein SAMA_RS09620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SAMA_RS09625 PF00593 TonB dependent receptor SAMA_RS09625 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS09630 PF17864 RuvB AAA lid domain SAMA_RS09630 PF05491 RuvB C-terminal winged helix domain SAMA_RS09630 PF05496 Holliday junction DNA helicase RuvB P-loop domain SAMA_RS09635 PF01330 RuvA N terminal domain SAMA_RS09635 PF07499 RuvA, C-terminal domain SAMA_RS09640 PF02075 Crossover junction endodeoxyribonuclease RuvC SAMA_RS09645 PF01709 Transcriptional regulator SAMA_RS09650 PF02938 GAD domain SAMA_RS09650 PF00152 tRNA synthetases class II (D, K and N) SAMA_RS09650 PF01336 OB-fold nucleic acid binding domain SAMA_RS09655 PF00563 EAL domain SAMA_RS09655 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS09655 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS09660 PF13649 Methyltransferase domain SAMA_RS09665 PF08003 Protein of unknown function (DUF1698) SAMA_RS09670 PF08443 RimK-like ATP-grasp domain SAMA_RS09670 PF18030 RimK PreATP-grasp domain SAMA_RS09715 PF04055 Radical SAM superfamily SAMA_RS09715 PF06968 Biotin and Thiamin Synthesis associated domain SAMA_RS09720 PF05690 Thiazole biosynthesis protein ThiG SAMA_RS09730 PF00899 ThiF family SAMA_RS09735 PF02581 Thiamine monophosphate synthase SAMA_RS09740 PF01964 Radical SAM ThiC family SAMA_RS09740 PF13667 ThiC-associated domain SAMA_RS09750 PF03006 Haemolysin-III related SAMA_RS09755 PF01336 OB-fold nucleic acid binding domain SAMA_RS09755 PF07733 Bacterial DNA polymerase III alpha NTPase domain SAMA_RS09755 PF14579 Helix-hairpin-helix motif SAMA_RS09755 PF02811 PHP domain SAMA_RS09755 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SAMA_RS09770 PF16527 Two-component sensor protein CpxA, periplasmic domain SAMA_RS09770 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS09770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS09770 PF00672 HAMP domain SAMA_RS09775 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SAMA_RS09785 PF13230 Glutamine amidotransferases class-II SAMA_RS09790 PF02770 Acyl-CoA dehydrogenase, middle domain SAMA_RS09790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SAMA_RS09790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SAMA_RS09790 PF09317 Domain of unknown function (DUF1974) SAMA_RS09800 PF07730 Histidine kinase SAMA_RS09800 PF17200 Single Cache domain 2 SAMA_RS09805 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS09805 PF00072 Response regulator receiver domain SAMA_RS09820 PF00082 Subtilase family SAMA_RS09825 PF01527 Transposase SAMA_RS09830 PF13333 Integrase core domain SAMA_RS09830 PF13276 HTH-like domain SAMA_RS09830 PF00665 Integrase core domain SAMA_RS09845 PF00929 Exonuclease SAMA_RS09850 PF00075 RNase H SAMA_RS09855 PF03466 LysR substrate binding domain SAMA_RS09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS09865 PF00753 Metallo-beta-lactamase superfamily SAMA_RS09865 PF16123 Hydroxyacylglutathione hydrolase C-terminus SAMA_RS09870 PF01476 LysM domain SAMA_RS09870 PF01464 Transglycosylase SLT domain SAMA_RS09885 PF03737 Aldolase/RraA SAMA_RS09900 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS09900 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS09900 PF00563 EAL domain SAMA_RS09905 PF01794 Ferric reductase like transmembrane component SAMA_RS09910 PF00174 Oxidoreductase molybdopterin binding domain SAMA_RS09915 PF02646 RmuC family SAMA_RS09920 PF01464 Transglycosylase SLT domain SAMA_RS09920 PF14718 Soluble lytic murein transglycosylase L domain SAMA_RS09930 PF07726 ATPase family associated with various cellular activities (AAA) SAMA_RS09930 PF17863 AAA lid domain SAMA_RS09940 PF01841 Transglutaminase-like superfamily SAMA_RS09940 PF13559 Domain of unknown function (DUF4129) SAMA_RS09940 PF11992 Domain of unknown function (DUF3488) SAMA_RS09945 PF17946 RecC C-terminal domain SAMA_RS09950 PF12705 PD-(D/E)XK nuclease superfamily SAMA_RS09950 PF00580 UvrD/REP helicase N-terminal domain SAMA_RS09950 PF13361 UvrD-like helicase C-terminal domain SAMA_RS09955 PF13538 UvrD-like helicase C-terminal domain SAMA_RS09960 PF01820 D-ala D-ala ligase N-terminus SAMA_RS09960 PF07478 D-ala D-ala ligase C-terminus SAMA_RS09965 PF13193 AMP-binding enzyme C-terminal domain SAMA_RS09965 PF00501 AMP-binding enzyme SAMA_RS09970 PF00873 AcrB/AcrD/AcrF family SAMA_RS09975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SAMA_RS09980 PF06804 NlpB/DapX lipoprotein SAMA_RS09985 PF00701 Dihydrodipicolinate synthetase family SAMA_RS09990 PF01842 ACT domain SAMA_RS09995 PF00578 AhpC/TSA family SAMA_RS10000 PF01594 AI-2E family transporter SAMA_RS10010 PF07720 Tetratricopeptide repeat SAMA_RS10010 PF01435 Peptidase family M48 SAMA_RS10015 PF03960 ArsC family SAMA_RS10025 PF00308 Bacterial dnaA protein SAMA_RS10035 PF00860 Permease family SAMA_RS10040 PF00462 Glutaredoxin SAMA_RS10045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SAMA_RS10045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SAMA_RS10050 PF08298 PrkA AAA domain SAMA_RS10050 PF06798 PrkA serine protein kinase C-terminal domain SAMA_RS10055 PF04285 Protein of unknown function (DUF444) SAMA_RS10060 PF04293 SpoVR like protein SAMA_RS10065 PF07840 FadR C-terminal domain SAMA_RS10065 PF00392 Bacterial regulatory proteins, gntR family SAMA_RS10070 PF06450 Bacterial Na+/H+ antiporter B (NhaB) SAMA_RS10075 PF02600 Disulfide bond formation protein DsbB SAMA_RS10080 PF03692 Putative zinc- or iron-chelating domain SAMA_RS10090 PF05166 YcgL domain SAMA_RS10095 PF05209 Septum formation inhibitor MinC, N-terminal domain SAMA_RS10095 PF03775 Septum formation inhibitor MinC, C-terminal domain SAMA_RS10100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SAMA_RS10105 PF03776 Septum formation topological specificity factor MinE SAMA_RS10110 PF00570 HRDC domain SAMA_RS10110 PF01612 3'-5' exonuclease SAMA_RS10115 PF13193 AMP-binding enzyme C-terminal domain SAMA_RS10115 PF00501 AMP-binding enzyme SAMA_RS10120 PF12697 Alpha/beta hydrolase family SAMA_RS10140 PF00814 Glycoprotease family SAMA_RS10145 PF04851 Type III restriction enzyme, res subunit SAMA_RS10145 PF13307 Helicase C-terminal domain SAMA_RS10150 PF08029 HisG, C-terminal domain SAMA_RS10150 PF01634 ATP phosphoribosyltransferase SAMA_RS10155 PF00815 Histidinol dehydrogenase SAMA_RS10160 PF00155 Aminotransferase class I and II SAMA_RS10165 PF00475 Imidazoleglycerol-phosphate dehydratase SAMA_RS10165 PF08645 Polynucleotide kinase 3 phosphatase SAMA_RS10170 PF00117 Glutamine amidotransferase class-I SAMA_RS10175 PF00977 Histidine biosynthesis protein SAMA_RS10180 PF00977 Histidine biosynthesis protein SAMA_RS10185 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SAMA_RS10185 PF01502 Phosphoribosyl-AMP cyclohydrolase SAMA_RS10190 PF05230 MASE2 domain SAMA_RS10190 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS10195 PF03279 Bacterial lipid A biosynthesis acyltransferase SAMA_RS10200 PF00216 Bacterial DNA-binding protein SAMA_RS10205 PF01588 Putative tRNA binding domain SAMA_RS10205 PF03483 B3/4 domain SAMA_RS10205 PF03484 tRNA synthetase B5 domain SAMA_RS10205 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SAMA_RS10205 PF03147 Ferredoxin-fold anticodon binding domain SAMA_RS10210 PF01409 tRNA synthetases class II core domain (F) SAMA_RS10210 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SAMA_RS10215 PF00672 HAMP domain SAMA_RS10215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS10245 PF00313 'Cold-shock' DNA-binding domain SAMA_RS10250 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SAMA_RS10250 PF01243 Pyridoxamine 5'-phosphate oxidase SAMA_RS10260 PF17944 Arginine decarboxylase C-terminal helical extension SAMA_RS10260 PF17810 Arginine decarboxylase helical bundle domain SAMA_RS10260 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SAMA_RS10265 PF17284 Spermidine synthase tetramerisation domain SAMA_RS10275 PF04337 Protein of unknown function, DUF480 SAMA_RS10285 PF00005 ABC transporter SAMA_RS10290 PF00313 'Cold-shock' DNA-binding domain SAMA_RS10295 PF13847 Methyltransferase domain SAMA_RS10305 PF08411 Exonuclease C-terminal SAMA_RS10305 PF00929 Exonuclease SAMA_RS10310 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region SAMA_RS10310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SAMA_RS10315 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SAMA_RS10315 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SAMA_RS10320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SAMA_RS10320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SAMA_RS10330 PF02801 Beta-ketoacyl synthase, C-terminal domain SAMA_RS10330 PF00109 Beta-ketoacyl synthase, N-terminal domain SAMA_RS10335 PF00550 Phosphopantetheine attachment site SAMA_RS10345 PF00698 Acyl transferase domain SAMA_RS10350 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SAMA_RS10350 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SAMA_RS10355 PF02504 Fatty acid synthesis protein SAMA_RS10360 PF01783 Ribosomal L32p protein family SAMA_RS10365 PF02620 Large ribosomal RNA subunit accumulation protein YceD SAMA_RS10370 PF02545 Maf-like protein SAMA_RS10375 PF13419 Haloacid dehalogenase-like hydrolase SAMA_RS10380 PF00849 RNA pseudouridylate synthase SAMA_RS10380 PF01479 S4 domain SAMA_RS10385 PF00575 S1 RNA binding domain SAMA_RS10385 PF12111 Polyribonucleotide phosphorylase C terminal SAMA_RS10385 PF10150 Ribonuclease E/G family SAMA_RS10390 PF00916 Sulfate permease family SAMA_RS10390 PF01740 STAS domain SAMA_RS10395 PF01625 Peptide methionine sulfoxide reductase SAMA_RS10395 PF01641 SelR domain SAMA_RS10405 PF01926 50S ribosome-binding GTPase SAMA_RS10410 PF01451 Low molecular weight phosphotyrosine protein phosphatase SAMA_RS10415 PF14743 DNA ligase OB-like domain SAMA_RS10415 PF01068 ATP dependent DNA ligase domain SAMA_RS10420 PF01219 Prokaryotic diacylglycerol kinase SAMA_RS10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS10425 PF03466 LysR substrate binding domain SAMA_RS10430 PF04219 Protein of unknown function, DUF SAMA_RS10435 PF08443 RimK-like ATP-grasp domain SAMA_RS10435 PF18030 RimK PreATP-grasp domain SAMA_RS10445 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS10460 PF00691 OmpA family SAMA_RS10460 PF01389 OmpA-like transmembrane domain SAMA_RS10465 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS10465 PF00072 Response regulator receiver domain SAMA_RS10480 PF01053 Cys/Met metabolism PLP-dependent enzyme SAMA_RS10490 PF00012 Hsp70 protein SAMA_RS10495 PF17941 Polyphosphate kinase C-terminal domain 1 SAMA_RS10495 PF13089 Polyphosphate kinase N-terminal domain SAMA_RS10495 PF13090 Polyphosphate kinase C-terminal domain 2 SAMA_RS10495 PF02503 Polyphosphate kinase middle domain SAMA_RS10500 PF02541 Ppx/GppA phosphatase family SAMA_RS10515 PF01810 LysE type translocator SAMA_RS10520 PF00155 Aminotransferase class I and II SAMA_RS10520 PF00392 Bacterial regulatory proteins, gntR family SAMA_RS10525 PF07690 Major Facilitator Superfamily SAMA_RS10530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SAMA_RS10530 PF00205 Thiamine pyrophosphate enzyme, central domain SAMA_RS10530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SAMA_RS10535 PF10369 Small subunit of acetolactate synthase SAMA_RS10540 PF00011 Hsp20/alpha crystallin family SAMA_RS10545 PF00149 Calcineurin-like phosphoesterase SAMA_RS10545 PF02872 5'-nucleotidase, C-terminal domain SAMA_RS10550 PF02230 Phospholipase/Carboxylesterase SAMA_RS10560 PF01636 Phosphotransferase enzyme family SAMA_RS10565 PF00326 Prolyl oligopeptidase family SAMA_RS10570 PF00593 TonB dependent receptor SAMA_RS10570 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS10575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SAMA_RS10585 PF13406 Transglycosylase SLT domain SAMA_RS10600 PF01584 CheW-like domain SAMA_RS10600 PF00072 Response regulator receiver domain SAMA_RS10605 PF08212 Lipocalin-like domain SAMA_RS10610 PF08241 Methyltransferase domain SAMA_RS10620 PF04542 Sigma-70 region 2 SAMA_RS10620 PF04545 Sigma-70, region 4 SAMA_RS10625 PF12973 ChrR Cupin-like domain SAMA_RS10630 PF07670 Nucleoside recognition SAMA_RS10635 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SAMA_RS10635 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SAMA_RS10635 PF01189 16S rRNA methyltransferase RsmB/F SAMA_RS10640 PF01026 TatD related DNase SAMA_RS10650 PF09115 DNA polymerase III, delta subunit, C terminal SAMA_RS10655 PF02223 Thymidylate kinase SAMA_RS10660 PF02618 YceG-like family SAMA_RS10665 PF01063 Amino-transferase class IV SAMA_RS10670 PF00692 dUTPase SAMA_RS10675 PF00485 Phosphoribulokinase / Uridine kinase family SAMA_RS10680 PF10609 NUBPL iron-transfer P-loop NTPase SAMA_RS10685 PF01588 Putative tRNA binding domain SAMA_RS10685 PF09334 tRNA synthetases class I (M) SAMA_RS10690 PF01784 NIF3 (NGG1p interacting factor 3) SAMA_RS10700 PF05433 Glycine zipper 2TM domain SAMA_RS10705 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SAMA_RS10710 PF04376 Arginine-tRNA-protein transferase, N terminus SAMA_RS10710 PF04377 Arginine-tRNA-protein transferase, C terminus SAMA_RS10715 PF01176 Translation initiation factor 1A / IF-1 SAMA_RS10720 PF10431 C-terminal, D2-small domain, of ClpB protein SAMA_RS10720 PF00004 ATPase family associated with various cellular activities (AAA) SAMA_RS10720 PF02861 Clp amino terminal domain, pathogenicity island component SAMA_RS10720 PF17871 AAA lid domain SAMA_RS10720 PF07724 AAA domain (Cdc48 subfamily) SAMA_RS10725 PF02617 ATP-dependent Clp protease adaptor protein ClpS SAMA_RS10735 PF03971 Monomeric isocitrate dehydrogenase SAMA_RS10740 PF00849 RNA pseudouridylate synthase SAMA_RS10745 PF00293 NUDIX domain SAMA_RS10755 PF04356 Protein of unknown function (DUF489) SAMA_RS10760 PF08328 Adenylosuccinate lyase C-terminal SAMA_RS10760 PF00206 Lyase SAMA_RS10765 PF08007 Cupin superfamily protein SAMA_RS10775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SAMA_RS10775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SAMA_RS10785 PF01047 MarR family SAMA_RS10795 PF01565 FAD binding domain SAMA_RS10795 PF13183 4Fe-4S dicluster domain SAMA_RS10795 PF02913 FAD linked oxidases, C-terminal domain SAMA_RS10800 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SAMA_RS10800 PF02896 PEP-utilising enzyme, TIM barrel domain SAMA_RS10800 PF00391 PEP-utilising enzyme, mobile domain SAMA_RS10805 PF03618 Kinase/pyrophosphorylase SAMA_RS10810 PF00793 DAHP synthetase I family SAMA_RS10815 PF03061 Thioesterase superfamily SAMA_RS10820 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS10820 PF00072 Response regulator receiver domain SAMA_RS10825 PF01266 FAD dependent oxidoreductase SAMA_RS10830 PF16736 Single Cache-like SAMA_RS10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS10830 PF00989 PAS fold SAMA_RS10830 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS10835 PF16177 Acetyl-coenzyme A synthetase N-terminus SAMA_RS10835 PF13193 AMP-binding enzyme C-terminal domain SAMA_RS10835 PF00501 AMP-binding enzyme SAMA_RS10840 PF00271 Helicase conserved C-terminal domain SAMA_RS10840 PF04851 Type III restriction enzyme, res subunit SAMA_RS10845 PF00462 Glutaredoxin SAMA_RS10850 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS10850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS10850 PF00672 HAMP domain SAMA_RS10850 PF01627 Hpt domain SAMA_RS10850 PF17149 Periplasmic sensor domain found in signal transduction proteins SAMA_RS10850 PF00072 Response regulator receiver domain SAMA_RS10900 PF13174 Tetratricopeptide repeat SAMA_RS10900 PF16331 TolA binding protein trimerisation SAMA_RS10905 PF00691 OmpA family SAMA_RS10910 PF07676 WD40-like Beta Propeller Repeat SAMA_RS10910 PF04052 TolB amino-terminal domain SAMA_RS10920 PF02472 Biopolymer transport protein ExbD/TolR SAMA_RS10925 PF01618 MotA/TolQ/ExbB proton channel family SAMA_RS10930 PF03061 Thioesterase superfamily SAMA_RS10935 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SAMA_RS10935 PF00326 Prolyl oligopeptidase family SAMA_RS10940 PF00691 OmpA family SAMA_RS10940 PF18393 MotY N-terminal domain SAMA_RS10945 PF00929 Exonuclease SAMA_RS10950 PF10417 C-terminal domain of 1-Cys peroxiredoxin SAMA_RS10950 PF00578 AhpC/TSA family SAMA_RS10955 PF13726 Na+-H+ antiporter family SAMA_RS10955 PF03553 Na+/H+ antiporter family SAMA_RS10965 PF00586 AIR synthase related protein, N-terminal domain SAMA_RS10965 PF02769 AIR synthase related protein, C-terminal domain SAMA_RS10970 PF00551 Formyl transferase SAMA_RS10975 PF13344 Haloacid dehalogenase-like hydrolase SAMA_RS10985 PF13537 Glutamine amidotransferase domain SAMA_RS10985 PF00733 Asparagine synthase SAMA_RS11010 PF00583 Acetyltransferase (GNAT) family SAMA_RS11035 PF01554 MatE SAMA_RS11040 PF00027 Cyclic nucleotide-binding domain SAMA_RS11040 PF00520 Ion transport protein SAMA_RS11050 PF06185 YecM protein SAMA_RS11055 PF01263 Aldose 1-epimerase SAMA_RS11070 PF12833 Helix-turn-helix domain SAMA_RS11070 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term SAMA_RS11075 PF08496 Peptidase family S49 N-terminal SAMA_RS11075 PF01343 Peptidase family S49 SAMA_RS11080 PF12262 Bacterial virulence factor lipase N-terminal SAMA_RS11085 PF00106 short chain dehydrogenase SAMA_RS11100 PF01479 S4 domain SAMA_RS11100 PF00849 RNA pseudouridylate synthase SAMA_RS11105 PF04079 Segregation and condensation complex subunit ScpB SAMA_RS11110 PF02616 Segregation and condensation protein ScpA SAMA_RS11115 PF01300 Telomere recombination SAMA_RS11120 PF02811 PHP domain SAMA_RS11125 PF00425 chorismate binding enzyme SAMA_RS11125 PF04715 Anthranilate synthase component I, N terminal region SAMA_RS11130 PF00117 Glutamine amidotransferase class-I SAMA_RS11135 PF00591 Glycosyl transferase family, a/b domain SAMA_RS11135 PF02885 Glycosyl transferase family, helical bundle domain SAMA_RS11140 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SAMA_RS11140 PF00218 Indole-3-glycerol phosphate synthase SAMA_RS11145 PF00291 Pyridoxal-phosphate dependent enzyme SAMA_RS11150 PF00290 Tryptophan synthase alpha chain SAMA_RS11165 PF04279 Intracellular septation protein A SAMA_RS11170 PF03795 YCII-related domain SAMA_RS11175 PF03372 Endonuclease/Exonuclease/phosphatase family SAMA_RS11180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS11180 PF00672 HAMP domain SAMA_RS11180 PF02743 Cache domain SAMA_RS11190 PF00753 Metallo-beta-lactamase superfamily SAMA_RS11195 PF00561 alpha/beta hydrolase fold SAMA_RS11205 PF01131 DNA topoisomerase SAMA_RS11205 PF01751 Toprim domain SAMA_RS11215 PF00156 Phosphoribosyl transferase domain SAMA_RS11220 PF02674 Colicin V production protein SAMA_RS11225 PF05036 Sporulation related domain SAMA_RS11230 PF08245 Mur ligase middle domain SAMA_RS11230 PF02875 Mur ligase family, glutamate ligase domain SAMA_RS11235 PF01416 tRNA pseudouridine synthase SAMA_RS11245 PF02774 Semialdehyde dehydrogenase, dimerisation domain SAMA_RS11245 PF01118 Semialdehyde dehydrogenase, NAD binding domain SAMA_RS11250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAMA_RS11250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAMA_RS11250 PF11890 Domain of unknown function (DUF3410) SAMA_RS11255 PF02801 Beta-ketoacyl synthase, C-terminal domain SAMA_RS11255 PF00109 Beta-ketoacyl synthase, N-terminal domain SAMA_RS11280 PF01264 Chorismate synthase SAMA_RS11285 PF05175 Methyltransferase small domain SAMA_RS11290 PF01713 Smr domain SAMA_RS11295 PF00300 Histidine phosphatase superfamily (branch 1) SAMA_RS11300 PF05193 Peptidase M16 inactive domain SAMA_RS11300 PF00675 Insulinase (Peptidase family M16) SAMA_RS11300 PF16187 Middle or third domain of peptidase_M16 SAMA_RS11305 PF00563 EAL domain SAMA_RS11305 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS11305 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS11320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SAMA_RS11320 PF00378 Enoyl-CoA hydratase/isomerase SAMA_RS11320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SAMA_RS11325 PF02803 Thiolase, C-terminal domain SAMA_RS11325 PF00108 Thiolase, N-terminal domain SAMA_RS11330 PF17863 AAA lid domain SAMA_RS11330 PF07726 ATPase family associated with various cellular activities (AAA) SAMA_RS11335 PF01882 Protein of unknown function DUF58 SAMA_RS11350 PF13519 von Willebrand factor type A domain SAMA_RS11350 PF07584 Aerotolerance regulator N-terminal SAMA_RS11360 PF08281 Sigma-70, region 4 SAMA_RS11360 PF04542 Sigma-70 region 2 SAMA_RS11370 PF00474 Sodium:solute symporter family SAMA_RS11375 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SAMA_RS11395 PF00873 AcrB/AcrD/AcrF family SAMA_RS11405 PF00581 Rhodanese-like domain SAMA_RS11410 PF04151 Bacterial pre-peptidase C-terminal domain SAMA_RS11410 PF05922 Peptidase inhibitor I9 SAMA_RS11410 PF00082 Subtilase family SAMA_RS11415 PF07152 YaeQ protein SAMA_RS11420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SAMA_RS11420 PF10414 Sirohaem synthase dimerisation region SAMA_RS11435 PF07549 SecD/SecF GG Motif SAMA_RS11435 PF02355 Protein export membrane protein SAMA_RS11440 PF13721 SecD export protein N-terminal TM region SAMA_RS11440 PF02355 Protein export membrane protein SAMA_RS11440 PF07549 SecD/SecF GG Motif SAMA_RS11445 PF02699 Preprotein translocase subunit SAMA_RS11450 PF01702 Queuine tRNA-ribosyltransferase SAMA_RS11455 PF02547 Queuosine biosynthesis protein SAMA_RS11460 PF04336 Acyl carrier protein phosphodiesterase SAMA_RS11465 PF00578 AhpC/TSA family SAMA_RS11470 PF00849 RNA pseudouridylate synthase SAMA_RS11485 PF00375 Sodium:dicarboxylate symporter family SAMA_RS11490 PF01584 CheW-like domain SAMA_RS11490 PF00072 Response regulator receiver domain SAMA_RS11495 PF13091 PLD-like domain SAMA_RS11505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SAMA_RS11505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SAMA_RS11510 PF02805 Metal binding domain of Ada SAMA_RS11510 PF06029 AlkA N-terminal domain SAMA_RS11510 PF12833 Helix-turn-helix domain SAMA_RS11510 PF00730 HhH-GPD superfamily base excision DNA repair protein SAMA_RS11515 PF00664 ABC transporter transmembrane region SAMA_RS11515 PF00005 ABC transporter SAMA_RS11580 PF00749 tRNA synthetases class I (E and Q), catalytic domain SAMA_RS11590 PF03480 Bacterial extracellular solute-binding protein, family 7 SAMA_RS11595 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SAMA_RS11600 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SAMA_RS11605 PF02743 Cache domain SAMA_RS11605 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS11605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS11610 PF00072 Response regulator receiver domain SAMA_RS11610 PF02954 Bacterial regulatory protein, Fis family SAMA_RS11610 PF00158 Sigma-54 interaction domain SAMA_RS11615 PF07690 Major Facilitator Superfamily SAMA_RS11620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS11620 PF03466 LysR substrate binding domain SAMA_RS11630 PF01483 Proprotein convertase P-domain SAMA_RS11630 PF00082 Subtilase family SAMA_RS11635 PF14497 Glutathione S-transferase, C-terminal domain SAMA_RS11635 PF02798 Glutathione S-transferase, N-terminal domain SAMA_RS11645 PF00158 Sigma-54 interaction domain SAMA_RS11645 PF18024 Helix-turn-helix domain SAMA_RS11650 PF01329 Pterin 4 alpha carbinolamine dehydratase SAMA_RS11655 PF00351 Biopterin-dependent aromatic amino acid hydroxylase SAMA_RS11660 PF00483 Nucleotidyl transferase SAMA_RS11665 PF16363 GDP-mannose 4,6 dehydratase SAMA_RS11670 PF13187 4Fe-4S dicluster domain SAMA_RS11670 PF12838 4Fe-4S dicluster domain SAMA_RS11680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS11680 PF03466 LysR substrate binding domain SAMA_RS11700 PF00480 ROK family SAMA_RS11705 PF00459 Inositol monophosphatase family SAMA_RS11710 PF02811 PHP domain SAMA_RS11720 PF01370 NAD dependent epimerase/dehydratase family SAMA_RS11725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SAMA_RS11725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SAMA_RS11725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SAMA_RS11730 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SAMA_RS11735 PF04321 RmlD substrate binding domain SAMA_RS11740 PF00483 Nucleotidyl transferase SAMA_RS11750 PF16363 GDP-mannose 4,6 dehydratase SAMA_RS11755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SAMA_RS11755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SAMA_RS11755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SAMA_RS11755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SAMA_RS11760 PF02719 Polysaccharide biosynthesis protein SAMA_RS11770 PF02911 Formyl transferase, C-terminal domain SAMA_RS11770 PF01370 NAD dependent epimerase/dehydratase family SAMA_RS11770 PF00551 Formyl transferase SAMA_RS11775 PF02397 Bacterial sugar transferase SAMA_RS11785 PF01370 NAD dependent epimerase/dehydratase family SAMA_RS11790 PF00106 short chain dehydrogenase SAMA_RS11795 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SAMA_RS11795 PF14602 Hexapeptide repeat of succinyl-transferase SAMA_RS11795 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS11825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SAMA_RS11830 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS11835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SAMA_RS11835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SAMA_RS11840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SAMA_RS11840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SAMA_RS11840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SAMA_RS11845 PF02350 UDP-N-acetylglucosamine 2-epimerase SAMA_RS11860 PF02563 Polysaccharide biosynthesis/export protein SAMA_RS11860 PF10531 SLBB domain SAMA_RS11865 PF02357 Transcription termination factor nusG SAMA_RS11870 PF00854 POT family SAMA_RS11875 PF00158 Sigma-54 interaction domain SAMA_RS11875 PF00072 Response regulator receiver domain SAMA_RS11880 PF04333 MlaA lipoprotein SAMA_RS11900 PF01584 CheW-like domain SAMA_RS11910 PF13614 AAA domain SAMA_RS11920 PF01339 CheB methylesterase SAMA_RS11920 PF00072 Response regulator receiver domain SAMA_RS11925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS11925 PF02895 Signal transducing histidine kinase, homodimeric domain SAMA_RS11925 PF01584 CheW-like domain SAMA_RS11925 PF01627 Hpt domain SAMA_RS11925 PF00072 Response regulator receiver domain SAMA_RS11930 PF04344 Chemotaxis phosphatase, CheZ SAMA_RS11935 PF00072 Response regulator receiver domain SAMA_RS11940 PF04542 Sigma-70 region 2 SAMA_RS11940 PF04545 Sigma-70, region 4 SAMA_RS11940 PF04539 Sigma-70 region 3 SAMA_RS11945 PF10609 NUBPL iron-transfer P-loop NTPase SAMA_RS11950 PF00448 SRP54-type protein, GTPase domain SAMA_RS11955 PF00771 FHIPEP family SAMA_RS11960 PF01312 FlhB HrpN YscU SpaS Family SAMA_RS11965 PF01311 Bacterial export proteins, family 1 SAMA_RS11970 PF01313 Bacterial export proteins, family 3 SAMA_RS11975 PF00813 FliP family SAMA_RS11980 PF04347 Flagellar biosynthesis protein, FliO SAMA_RS11985 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SAMA_RS11990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SAMA_RS11990 PF02154 Flagellar motor switch protein FliM SAMA_RS12010 PF18269 T3SS EscN ATPase C-terminal domain SAMA_RS12010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SAMA_RS12020 PF14841 FliG middle domain SAMA_RS12020 PF01706 FliG C-terminal domain SAMA_RS12020 PF14842 FliG N-terminal domain SAMA_RS12025 PF01514 Secretory protein of YscJ/FliF family SAMA_RS12025 PF08345 Flagellar M-ring protein C-terminal SAMA_RS12030 PF02049 Flagellar hook-basal body complex protein FliE SAMA_RS12035 PF00072 Response regulator receiver domain SAMA_RS12035 PF00158 Sigma-54 interaction domain SAMA_RS12035 PF02954 Bacterial regulatory protein, Fis family SAMA_RS12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS12040 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS12040 PF13188 PAS domain SAMA_RS12045 PF06490 Flagellar regulatory protein FleQ SAMA_RS12045 PF02954 Bacterial regulatory protein, Fis family SAMA_RS12045 PF00158 Sigma-54 interaction domain SAMA_RS12050 PF02561 Flagellar protein FliS SAMA_RS12060 PF02465 Flagellar hook-associated protein 2 N-terminus SAMA_RS12060 PF07195 Flagellar hook-associated protein 2 C-terminus SAMA_RS12060 PF07196 Flagellin hook IN motif SAMA_RS12070 PF00700 Bacterial flagellin C-terminal helical region SAMA_RS12070 PF07196 Flagellin hook IN motif SAMA_RS12070 PF00669 Bacterial flagellin N-terminal helical region SAMA_RS12075 PF00669 Bacterial flagellin N-terminal helical region SAMA_RS12075 PF07196 Flagellin hook IN motif SAMA_RS12075 PF00700 Bacterial flagellin C-terminal helical region SAMA_RS12080 PF00669 Bacterial flagellin N-terminal helical region SAMA_RS12085 PF07196 Flagellin hook IN motif SAMA_RS12085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SAMA_RS12090 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SAMA_RS12090 PF10135 Rod binding protein SAMA_RS12095 PF02119 Flagellar P-ring protein SAMA_RS12100 PF02107 Flagellar L-ring protein SAMA_RS12105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SAMA_RS12105 PF00460 Flagella basal body rod protein SAMA_RS12110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SAMA_RS12110 PF00460 Flagella basal body rod protein SAMA_RS12115 PF07559 Flagellar basal body protein FlaE SAMA_RS12115 PF00460 Flagella basal body rod protein SAMA_RS12115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SAMA_RS12120 PF03963 Flagellar hook capping protein - N-terminal region SAMA_RS12125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SAMA_RS12125 PF00460 Flagella basal body rod protein SAMA_RS12130 PF00460 Flagella basal body rod protein SAMA_RS12135 PF01739 CheR methyltransferase, SAM binding domain SAMA_RS12135 PF03705 CheR methyltransferase, all-alpha domain SAMA_RS12140 PF00072 Response regulator receiver domain SAMA_RS12140 PF01584 CheW-like domain SAMA_RS12180 PF00672 HAMP domain SAMA_RS12180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS12180 PF17200 Single Cache domain 2 SAMA_RS12185 PF02719 Polysaccharide biosynthesis protein SAMA_RS12190 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SAMA_RS12200 PF08666 SAF domain SAMA_RS12200 PF03102 NeuB family SAMA_RS12205 PF02350 UDP-N-acetylglucosamine 2-epimerase SAMA_RS12220 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS12220 PF00483 Nucleotidyl transferase SAMA_RS12225 PF02348 Cytidylyltransferase SAMA_RS12250 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS12260 PF00873 AcrB/AcrD/AcrF family SAMA_RS12270 PF00672 HAMP domain SAMA_RS12270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS12285 PF02322 Cytochrome bd terminal oxidase subunit II SAMA_RS12290 PF01654 Cytochrome bd terminal oxidase subunit I SAMA_RS12300 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SAMA_RS12300 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SAMA_RS12300 PF02769 AIR synthase related protein, C-terminal domain SAMA_RS12305 PF00497 Bacterial extracellular solute-binding proteins, family 3 SAMA_RS12305 PF01464 Transglycosylase SLT domain SAMA_RS12310 PF14437 MafB19-like deaminase SAMA_RS12335 PF00117 Glutamine amidotransferase class-I SAMA_RS12335 PF02540 NAD synthase SAMA_RS12335 PF00958 GMP synthase C terminal domain SAMA_RS12340 PF00571 CBS domain SAMA_RS12340 PF00478 IMP dehydrogenase / GMP reductase domain SAMA_RS12345 PF13742 OB-fold nucleic acid binding domain SAMA_RS12345 PF02601 Exonuclease VII, large subunit SAMA_RS12350 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SAMA_RS12350 PF01926 50S ribosome-binding GTPase SAMA_RS12355 PF13360 PQQ-like domain SAMA_RS12365 PF03129 Anticodon binding domain SAMA_RS12365 PF13393 Histidyl-tRNA synthetase SAMA_RS12370 PF04551 GcpE protein SAMA_RS12375 PF13464 Domain of unknown function (DUF4115) SAMA_RS12385 PF04055 Radical SAM superfamily SAMA_RS12390 PF00571 CBS domain SAMA_RS12390 PF01595 Cyclin M transmembrane N-terminal domain SAMA_RS12395 PF02872 5'-nucleotidase, C-terminal domain SAMA_RS12395 PF00149 Calcineurin-like phosphoesterase SAMA_RS12405 PF12843 Putative quorum-sensing-regulated virulence factor SAMA_RS12425 PF00563 EAL domain SAMA_RS12425 PF00360 Phytochrome region SAMA_RS12425 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS12425 PF01590 GAF domain SAMA_RS12430 PF06167 Glucose-regulated metallo-peptidase M90 SAMA_RS12445 PF00463 Isocitrate lyase family SAMA_RS12450 PF01274 Malate synthase SAMA_RS12455 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS12470 PF04355 SmpA / OmlA family SAMA_RS12475 PF03658 RnfH family Ubiquitin SAMA_RS12480 PF03364 Polyketide cyclase / dehydrase and lipid transport SAMA_RS12485 PF01668 SmpB protein SAMA_RS12490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS12490 PF03466 LysR substrate binding domain SAMA_RS12495 PF07690 Major Facilitator Superfamily SAMA_RS12500 PF01979 Amidohydrolase family SAMA_RS12505 PF03606 C4-dicarboxylate anaerobic carrier SAMA_RS12510 PF00593 TonB dependent receptor SAMA_RS12510 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS12515 PF03575 Peptidase family S51 SAMA_RS12530 PF00672 HAMP domain SAMA_RS12530 PF17200 Single Cache domain 2 SAMA_RS12530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS12540 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS12540 PF00072 Response regulator receiver domain SAMA_RS12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS12545 PF13493 Domain of unknown function (DUF4118) SAMA_RS12545 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS12545 PF13426 PAS domain SAMA_RS12545 PF08447 PAS fold SAMA_RS12545 PF00989 PAS fold SAMA_RS12550 PF00890 FAD binding domain SAMA_RS12550 PF04205 FMN-binding domain SAMA_RS12565 PF00270 DEAD/DEAH box helicase SAMA_RS12565 PF00271 Helicase conserved C-terminal domain SAMA_RS12570 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS12570 PF00563 EAL domain SAMA_RS12570 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS12575 PF13654 AAA domain SAMA_RS12575 PF05362 Lon protease (S16) C-terminal proteolytic domain SAMA_RS12580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SAMA_RS12595 PF01709 Transcriptional regulator SAMA_RS12600 PF00854 POT family SAMA_RS12610 PF05922 Peptidase inhibitor I9 SAMA_RS12610 PF00082 Subtilase family SAMA_RS12620 PF14685 Tricorn protease PDZ domain SAMA_RS12620 PF14684 Tricorn protease C1 domain SAMA_RS12620 PF03572 Peptidase family S41 SAMA_RS12620 PF07676 WD40-like Beta Propeller Repeat SAMA_RS12635 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS12640 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SAMA_RS12640 PF03641 Possible lysine decarboxylase SAMA_RS12640 PF11892 Domain of unknown function (DUF3412) SAMA_RS12645 PF01367 5'-3' exonuclease, C-terminal SAM fold SAMA_RS12645 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SAMA_RS12655 PF07676 WD40-like Beta Propeller Repeat SAMA_RS12655 PF00326 Prolyl oligopeptidase family SAMA_RS12660 PF00180 Isocitrate/isopropylmalate dehydrogenase SAMA_RS12660 PF18324 Hypothetical protein TT1725 SAMA_RS12665 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SAMA_RS12675 PF01728 FtsJ-like methyltransferase SAMA_RS12675 PF18125 RlmM ferredoxin-like domain SAMA_RS12680 PF04241 Protein of unknown function (DUF423) SAMA_RS12690 PF03466 LysR substrate binding domain SAMA_RS12690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS12700 PF02568 Thiamine biosynthesis protein (ThiI) SAMA_RS12700 PF02926 THUMP domain SAMA_RS12710 PF01618 MotA/TolQ/ExbB proton channel family SAMA_RS12715 PF02609 Exonuclease VII small subunit SAMA_RS12720 PF00348 Polyprenyl synthetase SAMA_RS12725 PF02780 Transketolase, C-terminal domain SAMA_RS12725 PF02779 Transketolase, pyrimidine binding domain SAMA_RS12725 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SAMA_RS12730 PF01025 GrpE SAMA_RS12735 PF01513 ATP-NAD kinase SAMA_RS12740 PF02652 L-lactate permease SAMA_RS12750 PF02754 Cysteine-rich domain SAMA_RS12755 PF13183 4Fe-4S dicluster domain SAMA_RS12755 PF11870 Domain of unknown function (DUF3390) SAMA_RS12755 PF02589 LUD domain SAMA_RS12775 PF07683 Cobalamin synthesis protein cobW C-terminal domain SAMA_RS12775 PF02492 CobW/HypB/UreG, nucleotide-binding domain SAMA_RS12780 PF00270 DEAD/DEAH box helicase SAMA_RS12780 PF00271 Helicase conserved C-terminal domain SAMA_RS12785 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS12785 PF00563 EAL domain SAMA_RS12785 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS12790 PF08323 Starch synthase catalytic domain SAMA_RS12790 PF00534 Glycosyl transferases group 1 SAMA_RS12795 PF00483 Nucleotidyl transferase SAMA_RS12800 PF00343 Carbohydrate phosphorylase SAMA_RS12805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SAMA_RS12805 PF00128 Alpha amylase, catalytic domain SAMA_RS12805 PF18390 Glycogen debranching enzyme C-terminal domain SAMA_RS12810 PF02806 Alpha amylase, C-terminal all-beta domain SAMA_RS12810 PF00128 Alpha amylase, catalytic domain SAMA_RS12810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SAMA_RS12815 PF02446 4-alpha-glucanotransferase SAMA_RS12820 PF00465 Iron-containing alcohol dehydrogenase SAMA_RS12830 PF03553 Na+/H+ antiporter family SAMA_RS12835 PF01266 FAD dependent oxidoreductase SAMA_RS12850 PF03061 Thioesterase superfamily SAMA_RS12855 PF01212 Beta-eliminating lyase SAMA_RS12860 PF03458 UPF0126 domain SAMA_RS12865 PF08534 Redoxin SAMA_RS12870 PF00924 Mechanosensitive ion channel SAMA_RS12870 PF05552 Conserved TM helix SAMA_RS12875 PF05736 OprF membrane domain SAMA_RS12875 PF00691 OmpA family SAMA_RS12900 PF01253 Translation initiation factor SUI1 SAMA_RS12905 PF02622 Uncharacterized ACR, COG1678 SAMA_RS12910 PF03652 Holliday junction resolvase SAMA_RS12915 PF00255 Glutathione peroxidase SAMA_RS12920 PF00437 Type II/IV secretion system protein SAMA_RS12925 PF00437 Type II/IV secretion system protein SAMA_RS12930 PF01168 Alanine racemase, N-terminal domain SAMA_RS12935 PF03807 NADP oxidoreductase coenzyme F420-dependent SAMA_RS12935 PF14748 Pyrroline-5-carboxylate reductase dimerisation SAMA_RS12940 PF02325 YGGT family SAMA_RS12945 PF02594 Uncharacterised ACR, YggU family COG1872 SAMA_RS12955 PF01725 Ham1 family SAMA_RS12960 PF04055 Radical SAM superfamily SAMA_RS12960 PF06969 HemN C-terminal domain SAMA_RS12970 PF03466 LysR substrate binding domain SAMA_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS12980 PF04960 Glutaminase SAMA_RS12985 PF04320 Protein with unknown function (DUF469) SAMA_RS12990 PF02390 Putative methyltransferase SAMA_RS12995 PF00633 Helix-hairpin-helix motif SAMA_RS12995 PF14815 NUDIX domain SAMA_RS12995 PF00730 HhH-GPD superfamily base excision DNA repair protein SAMA_RS12995 PF10576 Iron-sulfur binding domain of endonuclease III SAMA_RS13000 PF04362 Bacterial Fe(2+) trafficking SAMA_RS13035 PF04244 Deoxyribodipyrimidine photo-lyase-related protein SAMA_RS13040 PF02355 Protein export membrane protein SAMA_RS13040 PF07549 SecD/SecF GG Motif SAMA_RS13045 PF13721 SecD export protein N-terminal TM region SAMA_RS13045 PF02355 Protein export membrane protein SAMA_RS13045 PF07549 SecD/SecF GG Motif SAMA_RS13060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS13060 PF00672 HAMP domain SAMA_RS13060 PF12729 Four helix bundle sensory module for signal transduction SAMA_RS13065 PF02142 MGS-like domain SAMA_RS13065 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SAMA_RS13065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SAMA_RS13070 PF00117 Glutamine amidotransferase class-I SAMA_RS13070 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SAMA_RS13075 PF01113 Dihydrodipicolinate reductase, N-terminus SAMA_RS13075 PF05173 Dihydrodipicolinate reductase, C-terminus SAMA_RS13080 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SAMA_RS13080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SAMA_RS13090 PF12833 Helix-turn-helix domain SAMA_RS13090 PF01965 DJ-1/PfpI family SAMA_RS13095 PF02798 Glutathione S-transferase, N-terminal domain SAMA_RS13100 PF00226 DnaJ domain SAMA_RS13100 PF01556 DnaJ C terminal domain SAMA_RS13100 PF00684 DnaJ central domain SAMA_RS13105 PF00012 Hsp70 protein SAMA_RS13125 PF00171 Aldehyde dehydrogenase family SAMA_RS13130 PF01472 PUA domain SAMA_RS13130 PF00696 Amino acid kinase family SAMA_RS13135 PF00860 Permease family SAMA_RS13140 PF00883 Cytosol aminopeptidase family, catalytic domain SAMA_RS13140 PF02789 Cytosol aminopeptidase family, N-terminal domain SAMA_RS13145 PF07687 Peptidase dimerisation domain SAMA_RS13145 PF01546 Peptidase family M20/M25/M40 SAMA_RS13150 PF03466 LysR substrate binding domain SAMA_RS13150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS13155 PF04371 Porphyromonas-type peptidyl-arginine deiminase SAMA_RS13160 PF01425 Amidase SAMA_RS13170 PF05872 Bacterial protein of unknown function (DUF853) SAMA_RS13180 PF08032 RNA 2'-O ribose methyltransferase substrate binding SAMA_RS13180 PF00588 SpoU rRNA Methylase family SAMA_RS13185 PF11798 IMS family HHH motif SAMA_RS13185 PF00817 impB/mucB/samB family SAMA_RS13185 PF11799 impB/mucB/samB family C-terminal domain SAMA_RS13190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS13190 PF00672 HAMP domain SAMA_RS13190 PF02743 Cache domain SAMA_RS13195 PF00210 Ferritin-like domain SAMA_RS13200 PF00210 Ferritin-like domain SAMA_RS13205 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS13210 PF04400 (Na+)-NQR maturation NqrM SAMA_RS13215 PF02424 ApbE family SAMA_RS13220 PF00111 2Fe-2S iron-sulfur cluster binding domain SAMA_RS13220 PF00175 Oxidoreductase NAD-binding domain SAMA_RS13220 PF00970 Oxidoreductase FAD-binding domain SAMA_RS13225 PF02508 Rnf-Nqr subunit, membrane protein SAMA_RS13230 PF02508 Rnf-Nqr subunit, membrane protein SAMA_RS13235 PF04205 FMN-binding domain SAMA_RS13240 PF03116 NQR2, RnfD, RnfE family SAMA_RS13245 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) SAMA_RS13245 PF11973 NQRA C-terminal domain SAMA_RS13255 PF02664 S-Ribosylhomocysteinase (LuxS) SAMA_RS13260 PF03480 Bacterial extracellular solute-binding protein, family 7 SAMA_RS13265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SAMA_RS13275 PF01722 BolA-like protein SAMA_RS13290 PF05175 Methyltransferase small domain SAMA_RS13295 PF04399 Glutaredoxin 2, C terminal domain SAMA_RS13295 PF13417 Glutathione S-transferase, N-terminal domain SAMA_RS13300 PF04116 Fatty acid hydroxylase superfamily SAMA_RS13320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SAMA_RS13330 PF07690 Major Facilitator Superfamily SAMA_RS13335 PF04461 Protein of unknown function (DUF520) SAMA_RS13345 PF02558 Ketopantoate reductase PanE/ApbA SAMA_RS13345 PF08546 Ketopantoate reductase PanE/ApbA C terminal SAMA_RS13355 PF00793 DAHP synthetase I family SAMA_RS13365 PF13369 Transglutaminase-like superfamily SAMA_RS13370 PF04247 Invasion gene expression up-regulator, SirB SAMA_RS13375 PF13847 Methyltransferase domain SAMA_RS13375 PF17827 PrmC N-terminal domain SAMA_RS13380 PF00472 RF-1 domain SAMA_RS13380 PF03462 PCRF domain SAMA_RS13385 PF01488 Shikimate / quinate 5-dehydrogenase SAMA_RS13385 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SAMA_RS13385 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SAMA_RS13390 PF03550 Outer membrane lipoprotein LolB SAMA_RS13395 PF08544 GHMP kinases C terminal SAMA_RS13395 PF00288 GHMP kinases N terminal domain SAMA_RS13400 PF14572 Phosphoribosyl synthetase-associated domain SAMA_RS13400 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SAMA_RS13435 PF01926 50S ribosome-binding GTPase SAMA_RS13435 PF06071 Protein of unknown function (DUF933) SAMA_RS13440 PF01195 Peptidyl-tRNA hydrolase SAMA_RS13445 PF01494 FAD binding domain SAMA_RS13455 PF01938 TRAM domain SAMA_RS13455 PF00919 Uncharacterized protein family UPF0004 SAMA_RS13455 PF04055 Radical SAM superfamily SAMA_RS13460 PF02562 PhoH-like protein SAMA_RS13465 PF02130 Uncharacterized protein family UPF0054 SAMA_RS13470 PF03471 Transporter associated domain SAMA_RS13470 PF00571 CBS domain SAMA_RS13475 PF00795 Carbon-nitrogen hydrolase SAMA_RS13480 PF00563 EAL domain SAMA_RS13480 PF12792 CSS motif domain associated with EAL SAMA_RS13490 PF00133 tRNA synthetases class I (I, L, M and V) SAMA_RS13490 PF08264 Anticodon-binding domain of tRNA SAMA_RS13490 PF13603 Leucyl-tRNA synthetase, Domain 2 SAMA_RS13495 PF04390 Lipopolysaccharide-assembly SAMA_RS13505 PF01467 Cytidylyltransferase-like SAMA_RS13515 PF02590 Predicted SPOUT methyltransferase SAMA_RS13520 PF00905 Penicillin binding protein transpeptidase domain SAMA_RS13520 PF03717 Penicillin-binding Protein dimerisation domain SAMA_RS13525 PF01098 Cell cycle protein SAMA_RS13530 PF13406 Transglycosylase SLT domain SAMA_RS13535 PF05036 Sporulation related domain SAMA_RS13535 PF03330 Lytic transglycolase SAMA_RS13540 PF00768 D-alanyl-D-alanine carboxypeptidase SAMA_RS13540 PF07943 Penicillin-binding protein 5, C-terminal domain SAMA_RS13545 PF04359 Protein of unknown function (DUF493) SAMA_RS13550 PF03099 Biotin/lipoate A/B protein ligase family SAMA_RS13555 PF04055 Radical SAM superfamily SAMA_RS13555 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SAMA_RS13560 PF00583 Acetyltransferase (GNAT) family SAMA_RS13570 PF00210 Ferritin-like domain SAMA_RS13610 PF01066 CDP-alcohol phosphatidyltransferase SAMA_RS13625 PF02861 Clp amino terminal domain, pathogenicity island component SAMA_RS13625 PF17871 AAA lid domain SAMA_RS13625 PF00004 ATPase family associated with various cellular activities (AAA) SAMA_RS13625 PF07724 AAA domain (Cdc48 subfamily) SAMA_RS13625 PF10431 C-terminal, D2-small domain, of ClpB protein SAMA_RS13630 PF02578 Multi-copper polyphenol oxidoreductase laccase SAMA_RS13635 PF01479 S4 domain SAMA_RS13635 PF00849 RNA pseudouridylate synthase SAMA_RS13640 PF13525 Outer membrane lipoprotein SAMA_RS13665 PF00672 HAMP domain SAMA_RS13665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS13665 PF12729 Four helix bundle sensory module for signal transduction SAMA_RS13670 PF00360 Phytochrome region SAMA_RS13670 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS13670 PF01590 GAF domain SAMA_RS13670 PF00563 EAL domain SAMA_RS13675 PF00672 HAMP domain SAMA_RS13675 PF12729 Four helix bundle sensory module for signal transduction SAMA_RS13675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS13680 PF02423 Ornithine cyclodeaminase/mu-crystallin family SAMA_RS13685 PF04542 Sigma-70 region 2 SAMA_RS13685 PF08281 Sigma-70, region 4 SAMA_RS13700 PF01479 S4 domain SAMA_RS13700 PF00849 RNA pseudouridylate synthase SAMA_RS13705 PF01431 Peptidase family M13 SAMA_RS13705 PF05649 Peptidase family M13 SAMA_RS13720 PF00593 TonB dependent receptor SAMA_RS13720 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS13735 PF00390 Malic enzyme, N-terminal domain SAMA_RS13735 PF03949 Malic enzyme, NAD binding domain SAMA_RS13745 PF00072 Response regulator receiver domain SAMA_RS13745 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS13755 PF08331 Domain of unknown function (DUF1730) SAMA_RS13760 PF07311 Dodecin SAMA_RS13765 PF01717 Cobalamin-independent synthase, Catalytic domain SAMA_RS13765 PF08267 Cobalamin-independent synthase, N-terminal domain SAMA_RS13770 PF03466 LysR substrate binding domain SAMA_RS13770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS13785 PF00593 TonB dependent receptor SAMA_RS13785 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS13795 PF05656 Protein of unknown function (DUF805) SAMA_RS13800 PF00111 2Fe-2S iron-sulfur cluster binding domain SAMA_RS13800 PF03473 MOSC domain SAMA_RS13800 PF03476 MOSC N-terminal beta barrel domain SAMA_RS13805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS13805 PF00672 HAMP domain SAMA_RS13805 PF12729 Four helix bundle sensory module for signal transduction SAMA_RS13810 PF00202 Aminotransferase class-III SAMA_RS13815 PF00171 Aldehyde dehydrogenase family SAMA_RS13820 PF01266 FAD dependent oxidoreductase SAMA_RS13825 PF00528 Binding-protein-dependent transport system inner membrane component SAMA_RS13830 PF00528 Binding-protein-dependent transport system inner membrane component SAMA_RS13835 PF08402 TOBE domain SAMA_RS13835 PF00005 ABC transporter SAMA_RS13840 PF13416 Bacterial extracellular solute-binding protein SAMA_RS13845 PF00202 Aminotransferase class-III SAMA_RS13850 PF00120 Glutamine synthetase, catalytic domain SAMA_RS13855 PF07722 Peptidase C26 SAMA_RS13870 PF01266 FAD dependent oxidoreductase SAMA_RS13875 PF00171 Aldehyde dehydrogenase family SAMA_RS13880 PF00202 Aminotransferase class-III SAMA_RS13885 PF00171 Aldehyde dehydrogenase family SAMA_RS13915 PF04205 FMN-binding domain SAMA_RS13940 PF03969 AFG1-like ATPase SAMA_RS13945 PF01979 Amidohydrolase family SAMA_RS13945 PF13382 Adenine deaminase C-terminal domain SAMA_RS13950 PF03466 LysR substrate binding domain SAMA_RS13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS13955 PF03710 Glutamate-ammonia ligase adenylyltransferase SAMA_RS13955 PF08335 GlnD PII-uridylyltransferase SAMA_RS13975 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) SAMA_RS13995 PF07885 Ion channel SAMA_RS14000 PF01928 CYTH domain SAMA_RS14005 PF01865 Protein of unknown function DUF47 SAMA_RS14010 PF01384 Phosphate transporter family SAMA_RS14015 PF08239 Bacterial SH3 domain SAMA_RS14020 PF18327 Proline utilization A proline dehydrogenase N-terminal domain SAMA_RS14020 PF00171 Aldehyde dehydrogenase family SAMA_RS14020 PF14850 DNA-binding domain of Proline dehydrogenase SAMA_RS14020 PF01619 Proline dehydrogenase SAMA_RS14030 PF00664 ABC transporter transmembrane region SAMA_RS14030 PF00005 ABC transporter SAMA_RS14035 PF00005 ABC transporter SAMA_RS14035 PF00664 ABC transporter transmembrane region SAMA_RS14045 PF07732 Multicopper oxidase SAMA_RS14045 PF00394 Multicopper oxidase SAMA_RS14055 PF02630 SCO1/SenC SAMA_RS14075 PF00270 DEAD/DEAH box helicase SAMA_RS14075 PF00271 Helicase conserved C-terminal domain SAMA_RS14095 PF04266 ASCH domain SAMA_RS14100 PF02567 Phenazine biosynthesis-like protein SAMA_RS14110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SAMA_RS14110 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SAMA_RS14115 PF02225 PA domain SAMA_RS14115 PF13860 FlgD Ig-like domain SAMA_RS14115 PF05922 Peptidase inhibitor I9 SAMA_RS14115 PF00082 Subtilase family SAMA_RS14130 PF00072 Response regulator receiver domain SAMA_RS14130 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS14135 PF13426 PAS domain SAMA_RS14135 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS14135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS14135 PF00672 HAMP domain SAMA_RS14140 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SAMA_RS14175 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SAMA_RS14180 PF08240 Alcohol dehydrogenase GroES-like domain SAMA_RS14180 PF00107 Zinc-binding dehydrogenase SAMA_RS14195 PF06719 AraC-type transcriptional regulator N-terminus SAMA_RS14195 PF12833 Helix-turn-helix domain SAMA_RS14205 PF00578 AhpC/TSA family SAMA_RS14210 PF01965 DJ-1/PfpI family SAMA_RS14210 PF12833 Helix-turn-helix domain SAMA_RS14230 PF02347 Glycine cleavage system P-protein SAMA_RS14235 PF01597 Glycine cleavage H-protein SAMA_RS14240 PF08669 Glycine cleavage T-protein C-terminal barrel domain SAMA_RS14240 PF01571 Aminomethyltransferase folate-binding domain SAMA_RS14245 PF01494 FAD binding domain SAMA_RS14250 PF01494 FAD binding domain SAMA_RS14255 PF03695 Uncharacterised protein family (UPF0149) SAMA_RS14260 PF05164 Cell division protein ZapA SAMA_RS14265 PF01812 5-formyltetrahydrofolate cyclo-ligase family SAMA_RS14270 PF03466 LysR substrate binding domain SAMA_RS14270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS14290 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS14290 PF10442 FIST C domain SAMA_RS14290 PF00563 EAL domain SAMA_RS14290 PF08495 FIST N domain SAMA_RS14300 PF13411 MerR HTH family regulatory protein SAMA_RS14305 PF03060 Nitronate monooxygenase SAMA_RS14310 PF05661 Protein of unknown function (DUF808) SAMA_RS14315 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SAMA_RS14320 PF17768 RecJ OB domain SAMA_RS14320 PF02272 DHHA1 domain SAMA_RS14320 PF01368 DHH family SAMA_RS14325 PF10411 Disulfide bond isomerase protein N-terminus SAMA_RS14325 PF13098 Thioredoxin-like domain SAMA_RS14330 PF00589 Phage integrase family SAMA_RS14330 PF02899 Phage integrase, N-terminal SAM-like domain SAMA_RS14335 PF05525 Branched-chain amino acid transport protein SAMA_RS14340 PF05175 Methyltransferase small domain SAMA_RS14345 PF00270 DEAD/DEAH box helicase SAMA_RS14345 PF00271 Helicase conserved C-terminal domain SAMA_RS14350 PF13533 Biotin-lipoyl like SAMA_RS14355 PF00873 AcrB/AcrD/AcrF family SAMA_RS14400 PF03600 Citrate transporter SAMA_RS14410 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SAMA_RS14415 PF01116 Fructose-bisphosphate aldolase class-II SAMA_RS14420 PF00162 Phosphoglycerate kinase SAMA_RS14425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SAMA_RS14425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAMA_RS14430 PF00456 Transketolase, thiamine diphosphate binding domain SAMA_RS14430 PF02779 Transketolase, pyrimidine binding domain SAMA_RS14430 PF02780 Transketolase, C-terminal domain SAMA_RS14435 PF02773 S-adenosylmethionine synthetase, C-terminal domain SAMA_RS14435 PF00438 S-adenosylmethionine synthetase, N-terminal domain SAMA_RS14435 PF02772 S-adenosylmethionine synthetase, central domain SAMA_RS14445 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS14445 PF13188 PAS domain SAMA_RS14445 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS14445 PF00563 EAL domain SAMA_RS14475 PF00375 Sodium:dicarboxylate symporter family SAMA_RS14490 PF03315 Serine dehydratase beta chain SAMA_RS14490 PF03313 Serine dehydratase alpha chain SAMA_RS14495 PF03222 Tryptophan/tyrosine permease family SAMA_RS14500 PF01804 Penicillin amidase SAMA_RS14505 PF01931 Protein of unknown function DUF84 SAMA_RS14515 PF00248 Aldo/keto reductase family SAMA_RS14520 PF00266 Aminotransferase class-V SAMA_RS14560 PF00849 RNA pseudouridylate synthase SAMA_RS14560 PF01479 S4 domain SAMA_RS14595 PF13302 Acetyltransferase (GNAT) domain SAMA_RS14595 PF00027 Cyclic nucleotide-binding domain SAMA_RS14610 PF02779 Transketolase, pyrimidine binding domain SAMA_RS14610 PF02780 Transketolase, C-terminal domain SAMA_RS14615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SAMA_RS14615 PF02770 Acyl-CoA dehydrogenase, middle domain SAMA_RS14615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SAMA_RS14620 PF03466 LysR substrate binding domain SAMA_RS14620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS14635 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS14635 PF00072 Response regulator receiver domain SAMA_RS14640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS14640 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS14640 PF00672 HAMP domain SAMA_RS14645 PF06945 Protein of unknown function (DUF1289) SAMA_RS14655 PF17862 AAA+ lid domain SAMA_RS14655 PF00004 ATPase family associated with various cellular activities (AAA) SAMA_RS14655 PF01434 Peptidase family M41 SAMA_RS14660 PF00529 HlyD membrane-fusion protein of T1SS SAMA_RS14660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SAMA_RS14665 PF11742 Protein of unknown function (DUF3302) SAMA_RS14670 PF01370 NAD dependent epimerase/dehydratase family SAMA_RS14670 PF02222 ATP-grasp domain SAMA_RS14685 PF10670 Domain of unknown function (DUF4198) SAMA_RS14690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAMA_RS14690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAMA_RS14700 PF00226 DnaJ domain SAMA_RS14700 PF05099 Tellurite resistance protein TerB SAMA_RS14705 PF00483 Nucleotidyl transferase SAMA_RS14710 PF01636 Phosphotransferase enzyme family SAMA_RS14715 PF03968 OstA-like protein SAMA_RS14715 PF04453 LPS transport system D SAMA_RS14720 PF00639 PPIC-type PPIASE domain SAMA_RS14720 PF09312 SurA N-terminal domain SAMA_RS14725 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SAMA_RS14730 PF00398 Ribosomal RNA adenine dimethylase SAMA_RS14735 PF04379 ApaG domain SAMA_RS14740 PF00149 Calcineurin-like phosphoesterase SAMA_RS14745 PF00672 HAMP domain SAMA_RS14745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS14755 PF00186 Dihydrofolate reductase SAMA_RS14760 PF12821 Threonine/Serine exporter, ThrE SAMA_RS14765 PF06738 Putative threonine/serine exporter SAMA_RS14770 PF01018 GTP1/OBG SAMA_RS14770 PF01926 50S ribosome-binding GTPase SAMA_RS14775 PF01016 Ribosomal L27 protein SAMA_RS14780 PF00829 Ribosomal prokaryotic L21 protein SAMA_RS14785 PF00348 Polyprenyl synthetase SAMA_RS14790 PF03167 Uracil DNA glycosylase superfamily SAMA_RS14805 PF01590 GAF domain SAMA_RS14805 PF00158 Sigma-54 interaction domain SAMA_RS14810 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SAMA_RS14810 PF13746 4Fe-4S dicluster domain SAMA_RS14810 PF12801 4Fe-4S binding domain SAMA_RS14820 PF01507 Phosphoadenosine phosphosulfate reductase family SAMA_RS14825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SAMA_RS14825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SAMA_RS14830 PF00175 Oxidoreductase NAD-binding domain SAMA_RS14830 PF00667 FAD binding domain SAMA_RS14830 PF00258 Flavodoxin SAMA_RS14835 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SAMA_RS14835 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SAMA_RS14835 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SAMA_RS14840 PF02233 NAD(P) transhydrogenase beta subunit SAMA_RS14880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS14880 PF03466 LysR substrate binding domain SAMA_RS14910 PF00171 Aldehyde dehydrogenase family SAMA_RS14915 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS14920 PF03783 Curli production assembly/transport component CsgG SAMA_RS14935 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS14935 PF00989 PAS fold SAMA_RS14935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS14940 PF00158 Sigma-54 interaction domain SAMA_RS14940 PF00072 Response regulator receiver domain SAMA_RS14940 PF02954 Bacterial regulatory protein, Fis family SAMA_RS14945 PF02687 FtsX-like permease family SAMA_RS14945 PF12704 MacB-like periplasmic core domain SAMA_RS14955 PF00005 ABC transporter SAMA_RS14980 PF01497 Periplasmic binding protein SAMA_RS14985 PF01979 Amidohydrolase family SAMA_RS14990 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS14990 PF00072 Response regulator receiver domain SAMA_RS15010 PF00593 TonB dependent receptor SAMA_RS15010 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS15020 PF01336 OB-fold nucleic acid binding domain SAMA_RS15020 PF00152 tRNA synthetases class II (D, K and N) SAMA_RS15025 PF03462 PCRF domain SAMA_RS15025 PF00472 RF-1 domain SAMA_RS15035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS15035 PF00672 HAMP domain SAMA_RS15035 PF02743 Cache domain SAMA_RS15065 PF01177 Asp/Glu/Hydantoin racemase SAMA_RS15070 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS15085 PF02080 TrkA-C domain SAMA_RS15085 PF03600 Citrate transporter SAMA_RS15090 PF00009 Elongation factor Tu GTP binding domain SAMA_RS15095 PF01507 Phosphoadenosine phosphosulfate reductase family SAMA_RS15100 PF14824 Sirohaem biosynthesis protein central SAMA_RS15100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SAMA_RS15100 PF10414 Sirohaem synthase dimerisation region SAMA_RS15105 PF02253 Phospholipase A1 SAMA_RS15125 PF00593 TonB dependent receptor SAMA_RS15125 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS15130 PF13193 AMP-binding enzyme C-terminal domain SAMA_RS15130 PF00501 AMP-binding enzyme SAMA_RS15135 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SAMA_RS15135 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SAMA_RS15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS15140 PF03466 LysR substrate binding domain SAMA_RS15145 PF03466 LysR substrate binding domain SAMA_RS15145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS15160 PF13247 4Fe-4S dicluster domain SAMA_RS15165 PF03916 Polysulphide reductase, NrfD SAMA_RS15190 PF00664 ABC transporter transmembrane region SAMA_RS15190 PF00005 ABC transporter SAMA_RS15200 PF01266 FAD dependent oxidoreductase SAMA_RS15235 PF01433 Peptidase family M1 domain SAMA_RS15235 PF11838 ERAP1-like C-terminal domain SAMA_RS15245 PF00455 DeoR C terminal sensor domain SAMA_RS15245 PF08220 DeoR-like helix-turn-helix domain SAMA_RS15250 PF07690 Major Facilitator Superfamily SAMA_RS15255 PF00144 Beta-lactamase SAMA_RS15260 PF07693 KAP family P-loop domain SAMA_RS15270 PF16655 PhoD-like phosphatase, N-terminal domain SAMA_RS15270 PF09423 PhoD-like phosphatase SAMA_RS15275 PF00571 CBS domain SAMA_RS15275 PF01368 DHH family SAMA_RS15275 PF02833 DHHA2 domain SAMA_RS15275 PF07085 DRTGG domain SAMA_RS15280 PF04172 LrgB-like family SAMA_RS15285 PF03788 LrgA family SAMA_RS15290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS15290 PF03466 LysR substrate binding domain SAMA_RS15310 PF00881 Nitroreductase family SAMA_RS15315 PF00226 DnaJ domain SAMA_RS15315 PF01556 DnaJ C terminal domain SAMA_RS15315 PF00684 DnaJ central domain SAMA_RS15320 PF01323 DSBA-like thioredoxin domain SAMA_RS15325 PF03553 Na+/H+ antiporter family SAMA_RS15335 PF01479 S4 domain SAMA_RS15335 PF00849 RNA pseudouridylate synthase SAMA_RS15340 PF10459 Peptidase S46 SAMA_RS15345 PF03222 Tryptophan/tyrosine permease family SAMA_RS15350 PF01169 Uncharacterized protein family UPF0016 SAMA_RS15355 PF00199 Catalase SAMA_RS15355 PF06628 Catalase-related immune-responsive SAMA_RS15365 PF10688 Bacterial inner membrane protein SAMA_RS15370 PF03061 Thioesterase superfamily SAMA_RS15390 PF00072 Response regulator receiver domain SAMA_RS15390 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS15395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SAMA_RS15395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAMA_RS15395 PF01842 ACT domain SAMA_RS15400 PF01571 Aminomethyltransferase folate-binding domain SAMA_RS15405 PF00072 Response regulator receiver domain SAMA_RS15410 PF01627 Hpt domain SAMA_RS15410 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS15410 PF00672 HAMP domain SAMA_RS15410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SAMA_RS15410 PF00072 Response regulator receiver domain SAMA_RS15415 PF01235 Sodium:alanine symporter family SAMA_RS15425 PF00005 ABC transporter SAMA_RS15430 PF12704 MacB-like periplasmic core domain SAMA_RS15430 PF02687 FtsX-like permease family SAMA_RS15475 PF17785 PUA-like domain SAMA_RS15475 PF10672 S-adenosylmethionine-dependent methyltransferase SAMA_RS15500 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS15505 PF00905 Penicillin binding protein transpeptidase domain SAMA_RS15505 PF00912 Transglycosylase SAMA_RS15505 PF14814 Bifunctional transglycosylase second domain SAMA_RS15510 PF04408 Helicase associated domain (HA2) SAMA_RS15510 PF00270 DEAD/DEAH box helicase SAMA_RS15510 PF08482 ATP-dependent helicase C-terminal SAMA_RS15510 PF00271 Helicase conserved C-terminal domain SAMA_RS15515 PF00563 EAL domain SAMA_RS15515 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS15515 PF08448 PAS fold SAMA_RS15525 PF13673 Acetyltransferase (GNAT) domain SAMA_RS15530 PF00111 2Fe-2S iron-sulfur cluster binding domain SAMA_RS15530 PF00175 Oxidoreductase NAD-binding domain SAMA_RS15530 PF00970 Oxidoreductase FAD-binding domain SAMA_RS15535 PF02508 Rnf-Nqr subunit, membrane protein SAMA_RS15540 PF02508 Rnf-Nqr subunit, membrane protein SAMA_RS15545 PF04205 FMN-binding domain SAMA_RS15550 PF03116 NQR2, RnfD, RnfE family SAMA_RS15555 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) SAMA_RS15555 PF11973 NQRA C-terminal domain SAMA_RS15560 PF03927 NapD protein SAMA_RS15565 PF00384 Molybdopterin oxidoreductase SAMA_RS15565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SAMA_RS15565 PF01568 Molydopterin dinucleotide binding domain SAMA_RS15565 PF10518 TAT (twin-arginine translocation) pathway signal sequence SAMA_RS15570 PF12838 4Fe-4S dicluster domain SAMA_RS15570 PF12800 4Fe-4S binding domain SAMA_RS15575 PF12837 4Fe-4S binding domain SAMA_RS15575 PF12801 4Fe-4S binding domain SAMA_RS15580 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SAMA_RS15585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS15585 PF03466 LysR substrate binding domain SAMA_RS15590 PF01810 LysE type translocator SAMA_RS15595 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS15595 PF00072 Response regulator receiver domain SAMA_RS15610 PF03562 MltA specific insert domain SAMA_RS15610 PF06725 3D domain SAMA_RS15615 PF01300 Telomere recombination SAMA_RS15615 PF03481 Putative GTP-binding controlling metal-binding SAMA_RS15620 PF05726 Pirin C-terminal cupin domain SAMA_RS15620 PF02678 Pirin SAMA_RS15630 PF00005 ABC transporter SAMA_RS15630 PF12848 ABC transporter SAMA_RS15640 PF00732 GMC oxidoreductase SAMA_RS15640 PF05199 GMC oxidoreductase SAMA_RS15650 PF00561 alpha/beta hydrolase fold SAMA_RS15655 PF06794 Uncharacterised protein family (UPF0270) SAMA_RS15660 PF00485 Phosphoribulokinase / Uridine kinase family SAMA_RS15670 PF13545 Crp-like helix-turn-helix domain SAMA_RS15670 PF00027 Cyclic nucleotide-binding domain SAMA_RS15680 PF00072 Response regulator receiver domain SAMA_RS15680 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS15685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS15695 PF00171 Aldehyde dehydrogenase family SAMA_RS15700 PF04958 Arginine N-succinyltransferase beta subunit SAMA_RS15705 PF00202 Aminotransferase class-III SAMA_RS15710 PF07859 alpha/beta hydrolase fold SAMA_RS15720 PF00326 Prolyl oligopeptidase family SAMA_RS15725 PF00117 Glutamine amidotransferase class-I SAMA_RS15735 PF04386 Stringent starvation protein B SAMA_RS15740 PF02798 Glutathione S-transferase, N-terminal domain SAMA_RS15740 PF00043 Glutathione S-transferase, C-terminal domain SAMA_RS15745 PF02167 Cytochrome C1 family SAMA_RS15750 PF00033 Cytochrome b/b6/petB SAMA_RS15750 PF00032 Cytochrome b(C-terminal)/b6/petD SAMA_RS15755 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SAMA_RS15755 PF00355 Rieske [2Fe-2S] domain SAMA_RS15760 PF01145 SPFH domain / Band 7 family SAMA_RS15765 PF01145 SPFH domain / Band 7 family SAMA_RS15765 PF12221 Bacterial membrane protein N terminal SAMA_RS15770 PF13167 GTP-binding GTPase N-terminal SAMA_RS15770 PF01926 50S ribosome-binding GTPase SAMA_RS15770 PF16360 GTP-binding GTPase Middle Region SAMA_RS15775 PF17209 Hfq protein SAMA_RS15785 PF01119 DNA mismatch repair protein, C-terminal domain SAMA_RS15785 PF08676 MutL C terminal dimerisation domain SAMA_RS15790 PF01520 N-acetylmuramoyl-L-alanine amidase SAMA_RS15795 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SAMA_RS15800 PF03853 YjeF-related protein N-terminus SAMA_RS15800 PF01256 Carbohydrate kinase SAMA_RS15835 PF00929 Exonuclease SAMA_RS15840 PF03193 RsgA GTPase SAMA_RS15845 PF02666 Phosphatidylserine decarboxylase SAMA_RS15850 PF00892 EamA-like transporter family SAMA_RS15855 PF00924 Mechanosensitive ion channel SAMA_RS15855 PF12794 Mechanosensitive ion channel inner membrane domain 1 SAMA_RS15855 PF12795 Mechanosensitive ion channel porin domain SAMA_RS15860 PF03009 Glycerophosphoryl diester phosphodiesterase family SAMA_RS15870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SAMA_RS15875 PF04324 BFD-like [2Fe-2S] binding domain SAMA_RS15880 PF03989 DNA gyrase C-terminal domain, beta-propeller SAMA_RS15880 PF00521 DNA gyrase/topoisomerase IV, subunit A SAMA_RS15885 PF07995 Glucose / Sorbosone dehydrogenase SAMA_RS15890 PF01751 Toprim domain SAMA_RS15890 PF00204 DNA gyrase B SAMA_RS15890 PF00986 DNA gyrase B subunit, carboxyl terminus SAMA_RS15890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS15895 PF05728 Uncharacterised protein family (UPF0227) SAMA_RS15900 PF00149 Calcineurin-like phosphoesterase SAMA_RS15910 PF00293 NUDIX domain SAMA_RS15915 PF02321 Outer membrane efflux protein SAMA_RS15935 PF00378 Enoyl-CoA hydratase/isomerase SAMA_RS15950 PF01207 Dihydrouridine synthase (Dus) SAMA_RS15960 PF00842 Alanine racemase, C-terminal domain SAMA_RS15960 PF01168 Alanine racemase, N-terminal domain SAMA_RS15965 PF00772 DnaB-like helicase N terminal domain SAMA_RS15965 PF03796 DnaB-like helicase C terminal domain SAMA_RS15970 PF10459 Peptidase S46 SAMA_RS15975 PF00593 TonB dependent receptor SAMA_RS15980 PF01281 Ribosomal protein L9, N-terminal domain SAMA_RS15980 PF03948 Ribosomal protein L9, C-terminal domain SAMA_RS15985 PF01084 Ribosomal protein S18 SAMA_RS15990 PF01250 Ribosomal protein S6 SAMA_RS16000 PF00588 SpoU rRNA Methylase family SAMA_RS16000 PF08032 RNA 2'-O ribose methyltransferase substrate binding SAMA_RS16005 PF00575 S1 RNA binding domain SAMA_RS16005 PF00773 RNB domain SAMA_RS16005 PF17876 Cold shock domain SAMA_RS16005 PF08206 Ribonuclease B OB domain SAMA_RS16005 PF08461 Ribonuclease R winged-helix domain SAMA_RS16015 PF00709 Adenylosuccinate synthetase SAMA_RS16020 PF00380 Ribosomal protein S9/S16 SAMA_RS16025 PF00572 Ribosomal protein L13 SAMA_RS16030 PF03969 AFG1-like ATPase SAMA_RS16035 PF13180 PDZ domain SAMA_RS16035 PF00595 PDZ domain SAMA_RS16040 PF13180 PDZ domain SAMA_RS16045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SAMA_RS16050 PF01722 BolA-like protein SAMA_RS16060 PF05494 MlaC protein SAMA_RS16065 PF02470 MlaD protein SAMA_RS16070 PF02405 Permease MlaE SAMA_RS16075 PF00005 ABC transporter SAMA_RS16080 PF01699 Sodium/calcium exchanger protein SAMA_RS16085 PF01380 SIS domain SAMA_RS16085 PF00571 CBS domain SAMA_RS16105 PF12399 Branched-chain amino acid ATP-binding cassette transporter SAMA_RS16105 PF00005 ABC transporter SAMA_RS16110 PF00309 Sigma-54 factor, Activator interacting domain (AID) SAMA_RS16110 PF04552 Sigma-54, DNA binding domain SAMA_RS16110 PF04963 Sigma-54 factor, core binding domain SAMA_RS16115 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SAMA_RS16120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SAMA_RS16125 PF03668 P-loop ATPase protein family SAMA_RS16130 PF00381 PTS HPr component phosphorylation site SAMA_RS16135 PF03448 MgtE intracellular N domain SAMA_RS16135 PF01769 Divalent cation transporter SAMA_RS16135 PF00571 CBS domain SAMA_RS16150 PF13488 Glycine zipper SAMA_RS16150 PF00691 OmpA family SAMA_RS16160 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS16160 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS16160 PF00563 EAL domain SAMA_RS16165 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SAMA_RS16165 PF01266 FAD dependent oxidoreductase SAMA_RS16175 PF06224 Winged helix DNA-binding domain SAMA_RS16180 PF00753 Metallo-beta-lactamase superfamily SAMA_RS16220 PF18415 Histidine kinase receptor ArcB trans-membrane domain SAMA_RS16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS16220 PF00989 PAS fold SAMA_RS16220 PF00072 Response regulator receiver domain SAMA_RS16220 PF01627 Hpt domain SAMA_RS16220 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS16225 PF00072 Response regulator receiver domain SAMA_RS16230 PF07690 Major Facilitator Superfamily SAMA_RS16245 PF13188 PAS domain SAMA_RS16245 PF00563 EAL domain SAMA_RS16245 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS16245 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS16295 PF00118 TCP-1/cpn60 chaperonin family SAMA_RS16300 PF00166 Chaperonin 10 Kd subunit SAMA_RS16305 PF01554 MatE SAMA_RS16320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS16320 PF01627 Hpt domain SAMA_RS16320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SAMA_RS16320 PF00672 HAMP domain SAMA_RS16320 PF00072 Response regulator receiver domain SAMA_RS16320 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS16325 PF02562 PhoH-like protein SAMA_RS16325 PF13638 PIN domain SAMA_RS16330 PF18337 RapA N-terminal Tudor like domain SAMA_RS16330 PF18339 RapA N-terminal Tudor like domain 1 SAMA_RS16330 PF00176 SNF2 family N-terminal domain SAMA_RS16330 PF00271 Helicase conserved C-terminal domain SAMA_RS16330 PF12137 RNA polymerase recycling family C-terminal SAMA_RS16335 PF07969 Amidohydrolase family SAMA_RS16350 PF00378 Enoyl-CoA hydratase/isomerase SAMA_RS16355 PF01339 CheB methylesterase SAMA_RS16355 PF00072 Response regulator receiver domain SAMA_RS16360 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS16360 PF05230 MASE2 domain SAMA_RS16365 PF06877 Regulator of ribonuclease activity B SAMA_RS16370 PF01553 Acyltransferase SAMA_RS16395 PF05552 Conserved TM helix SAMA_RS16395 PF00924 Mechanosensitive ion channel SAMA_RS16400 PF01268 Formate--tetrahydrofolate ligase SAMA_RS16405 PF00248 Aldo/keto reductase family SAMA_RS16415 PF13847 Methyltransferase domain SAMA_RS16420 PF03975 CheD chemotactic sensory transduction SAMA_RS16435 PF13426 PAS domain SAMA_RS16435 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS16435 PF00563 EAL domain SAMA_RS16455 PF00072 Response regulator receiver domain SAMA_RS16460 PF00216 Bacterial DNA-binding protein SAMA_RS16470 PF08443 RimK-like ATP-grasp domain SAMA_RS16470 PF18030 RimK PreATP-grasp domain SAMA_RS16475 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS16475 PF00563 EAL domain SAMA_RS16475 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS16475 PF13188 PAS domain SAMA_RS16480 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS16480 PF00072 Response regulator receiver domain SAMA_RS16485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS16485 PF00360 Phytochrome region SAMA_RS16485 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS16485 PF08446 PAS fold SAMA_RS16485 PF01590 GAF domain SAMA_RS16500 PF01235 Sodium:alanine symporter family SAMA_RS16515 PF02219 Methylenetetrahydrofolate reductase SAMA_RS16520 PF00696 Amino acid kinase family SAMA_RS16520 PF00742 Homoserine dehydrogenase SAMA_RS16520 PF03447 Homoserine dehydrogenase, NAD binding domain SAMA_RS16525 PF01053 Cys/Met metabolism PLP-dependent enzyme SAMA_RS16530 PF01340 Met Apo-repressor, MetJ SAMA_RS16545 PF03916 Polysulphide reductase, NrfD SAMA_RS16550 PF13247 4Fe-4S dicluster domain SAMA_RS16555 PF01568 Molydopterin dinucleotide binding domain SAMA_RS16555 PF00384 Molybdopterin oxidoreductase SAMA_RS16555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SAMA_RS16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS16580 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS16585 PF00196 Bacterial regulatory proteins, luxR family SAMA_RS16585 PF00072 Response regulator receiver domain SAMA_RS16595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS16595 PF02743 Cache domain SAMA_RS16595 PF00672 HAMP domain SAMA_RS16600 PF00072 Response regulator receiver domain SAMA_RS16610 PF00873 AcrB/AcrD/AcrF family SAMA_RS16635 PF00472 RF-1 domain SAMA_RS16640 PF01220 Dehydroquinase class II SAMA_RS16645 PF00364 Biotin-requiring enzyme SAMA_RS16650 PF02785 Biotin carboxylase C-terminal domain SAMA_RS16650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SAMA_RS16650 PF00289 Biotin carboxylase, N-terminal domain SAMA_RS16660 PF01569 PAP2 superfamily SAMA_RS16670 PF03737 Aldolase/RraA SAMA_RS16675 PF00491 Arginase family SAMA_RS16680 PF01209 ubiE/COQ5 methyltransferase family SAMA_RS16690 PF03109 ABC1 family SAMA_RS16695 PF02416 mttA/Hcf106 family SAMA_RS16705 PF00902 Sec-independent protein translocase protein (TatC) SAMA_RS16715 PF01026 TatD related DNase SAMA_RS16720 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS16720 PF00360 Phytochrome region SAMA_RS16720 PF00563 EAL domain SAMA_RS16720 PF01590 GAF domain SAMA_RS16725 PF00490 Delta-aminolevulinic acid dehydratase SAMA_RS16735 PF00593 TonB dependent receptor SAMA_RS16740 PF02541 Ppx/GppA phosphatase family SAMA_RS16745 PF00271 Helicase conserved C-terminal domain SAMA_RS16745 PF00270 DEAD/DEAH box helicase SAMA_RS16750 PF00085 Thioredoxin SAMA_RS16755 PF07498 Rho termination factor, N-terminal domain SAMA_RS16755 PF07497 Rho termination factor, RNA-binding domain SAMA_RS16755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SAMA_RS16760 PF03466 LysR substrate binding domain SAMA_RS16760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS16765 PF13183 4Fe-4S dicluster domain SAMA_RS16765 PF13085 2Fe-2S iron-sulfur cluster binding domain SAMA_RS16770 PF02910 Fumarate reductase flavoprotein C-term SAMA_RS16770 PF00890 FAD binding domain SAMA_RS16775 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SAMA_RS16780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SAMA_RS16795 PF01207 Dihydrouridine synthase (Dus) SAMA_RS16800 PF02954 Bacterial regulatory protein, Fis family SAMA_RS16810 PF02595 Glycerate kinase family SAMA_RS16850 PF04405 Domain of Unknown function (DUF542) SAMA_RS16850 PF01814 Hemerythrin HHE cation binding domain SAMA_RS16860 PF01904 Protein of unknown function DUF72 SAMA_RS16870 PF07690 Major Facilitator Superfamily SAMA_RS16880 PF00989 PAS fold SAMA_RS16880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS16880 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS16885 PF00072 Response regulator receiver domain SAMA_RS16885 PF14532 Sigma-54 interaction domain SAMA_RS16885 PF02954 Bacterial regulatory protein, Fis family SAMA_RS16900 PF13419 Haloacid dehalogenase-like hydrolase SAMA_RS16905 PF00589 Phage integrase family SAMA_RS16905 PF02899 Phage integrase, N-terminal SAM-like domain SAMA_RS16915 PF01678 Diaminopimelate epimerase SAMA_RS16920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SAMA_RS16920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SAMA_RS16930 PF01491 Frataxin-like domain SAMA_RS16935 PF01295 Adenylate cyclase, class-I SAMA_RS16935 PF12633 Adenylate cyclase NT domain SAMA_RS16940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SAMA_RS16940 PF03900 Porphobilinogen deaminase, C-terminal domain SAMA_RS16945 PF02602 Uroporphyrinogen-III synthase HemD SAMA_RS16950 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase SAMA_RS16955 PF07719 Tetratricopeptide repeat SAMA_RS16955 PF07219 HemY protein N-terminus SAMA_RS16965 PF03412 Peptidase C39 family SAMA_RS16965 PF00664 ABC transporter transmembrane region SAMA_RS16965 PF00005 ABC transporter SAMA_RS16970 PF13533 Biotin-lipoyl like SAMA_RS16975 PF02321 Outer membrane efflux protein SAMA_RS16980 PF00691 OmpA family SAMA_RS16980 PF05736 OprF membrane domain SAMA_RS17015 PF00563 EAL domain SAMA_RS17015 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS17015 PF08447 PAS fold SAMA_RS17015 PF08448 PAS fold SAMA_RS17020 PF00580 UvrD/REP helicase N-terminal domain SAMA_RS17020 PF13361 UvrD-like helicase C-terminal domain SAMA_RS17025 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS17030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SAMA_RS17035 PF00873 AcrB/AcrD/AcrF family SAMA_RS17040 PF00141 Peroxidase SAMA_RS17045 PF04380 Membrane fusogenic activity SAMA_RS17050 PF04955 HupE / UreJ protein SAMA_RS17060 PF06123 Inner membrane protein CreD SAMA_RS17075 PF00266 Aminotransferase class-V SAMA_RS17080 PF00291 Pyridoxal-phosphate dependent enzyme SAMA_RS17080 PF00585 C-terminal regulatory domain of Threonine dehydratase SAMA_RS17085 PF00920 Dehydratase family SAMA_RS17095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SAMA_RS17095 PF00205 Thiamine pyrophosphate enzyme, central domain SAMA_RS17095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SAMA_RS17100 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SAMA_RS17100 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SAMA_RS17105 PF03466 LysR substrate binding domain SAMA_RS17105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS17110 PF00571 CBS domain SAMA_RS17110 PF01595 Cyclin M transmembrane N-terminal domain SAMA_RS17110 PF03471 Transporter associated domain SAMA_RS17120 PF01590 GAF domain SAMA_RS17120 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS17120 PF00563 EAL domain SAMA_RS17120 PF00360 Phytochrome region SAMA_RS17130 PF13335 Magnesium chelatase, subunit ChlI C-terminal SAMA_RS17130 PF01078 Magnesium chelatase, subunit ChlI SAMA_RS17140 PF01553 Acyltransferase SAMA_RS17145 PF01553 Acyltransferase SAMA_RS17155 PF04463 Protein of unknown function (DUF523) SAMA_RS17160 PF00392 Bacterial regulatory proteins, gntR family SAMA_RS17160 PF07729 FCD domain SAMA_RS17170 PF00285 Citrate synthase, C-terminal domain SAMA_RS17175 PF00694 Aconitase C-terminal domain SAMA_RS17175 PF00330 Aconitase family (aconitate hydratase) SAMA_RS17180 PF04303 PrpF protein SAMA_RS17185 PF00563 EAL domain SAMA_RS17185 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS17185 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS17190 PF01063 Amino-transferase class IV SAMA_RS17195 PF02515 CoA-transferase family III SAMA_RS17210 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS17210 PF00072 Response regulator receiver domain SAMA_RS17215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS17215 PF08918 PhoQ Sensor SAMA_RS17230 PF07690 Major Facilitator Superfamily SAMA_RS17235 PF02311 AraC-like ligand binding domain SAMA_RS17235 PF12833 Helix-turn-helix domain SAMA_RS17250 PF11737 Protein of unknown function (DUF3300) SAMA_RS17260 PF05922 Peptidase inhibitor I9 SAMA_RS17260 PF00082 Subtilase family SAMA_RS17280 PF01042 Endoribonuclease L-PSP SAMA_RS17285 PF03553 Na+/H+ antiporter family SAMA_RS17290 PF06005 Cell division protein ZapB SAMA_RS17300 PF01323 DSBA-like thioredoxin domain SAMA_RS17305 PF01636 Phosphotransferase enzyme family SAMA_RS17325 PF11756 Nitrous oxide-stimulated promoter SAMA_RS17335 PF00326 Prolyl oligopeptidase family SAMA_RS17360 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SAMA_RS17360 PF01276 Orn/Lys/Arg decarboxylase, major domain SAMA_RS17360 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SAMA_RS17365 PF13520 Amino acid permease SAMA_RS17370 PF00267 Gram-negative porin SAMA_RS17375 PF16653 Saccharopine dehydrogenase C-terminal domain SAMA_RS17375 PF03435 Saccharopine dehydrogenase NADP binding domain SAMA_RS17385 PF13302 Acetyltransferase (GNAT) domain SAMA_RS17395 PF03965 Penicillinase repressor SAMA_RS17405 PF01625 Peptide methionine sulfoxide reductase SAMA_RS17425 PF13411 MerR HTH family regulatory protein SAMA_RS17435 PF08497 Radical SAM N-terminal SAMA_RS17435 PF04055 Radical SAM superfamily SAMA_RS17435 PF11842 Domain of unknown function (DUF3362) SAMA_RS17455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SAMA_RS17460 PF04348 LppC putative lipoprotein SAMA_RS17465 PF02021 Uncharacterised protein family UPF0102 SAMA_RS17470 PF13580 SIS domain SAMA_RS17475 PF04972 BON domain SAMA_RS17485 PF03466 LysR substrate binding domain SAMA_RS17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS17490 PF00579 tRNA synthetases class I (W and Y) SAMA_RS17495 PF13419 Haloacid dehalogenase-like hydrolase SAMA_RS17500 PF00834 Ribulose-phosphate 3 epimerase family SAMA_RS17515 PF02086 D12 class N6 adenine-specific DNA methyltransferase SAMA_RS17525 PF01761 3-dehydroquinate synthase SAMA_RS17530 PF01202 Shikimate kinase SAMA_RS17535 PF11741 AMIN domain SAMA_RS17535 PF00263 Bacterial type II and III secretion system protein SAMA_RS17535 PF03958 Bacterial type II/III secretion system short domain SAMA_RS17535 PF07660 Secretin and TonB N terminus short domain SAMA_RS17545 PF04350 Pilus assembly protein, PilO SAMA_RS17555 PF11104 Type IV pilus assembly protein PilM; SAMA_RS17560 PF00905 Penicillin binding protein transpeptidase domain SAMA_RS17560 PF00912 Transglycosylase SAMA_RS17560 PF17092 Penicillin-binding protein OB-like domain SAMA_RS17565 PF17191 RecG wedge domain SAMA_RS17565 PF00271 Helicase conserved C-terminal domain SAMA_RS17565 PF00270 DEAD/DEAH box helicase SAMA_RS17585 PF00550 Phosphopantetheine attachment site SAMA_RS17590 PF00550 Phosphopantetheine attachment site SAMA_RS17600 PF00501 AMP-binding enzyme SAMA_RS17600 PF13193 AMP-binding enzyme C-terminal domain SAMA_RS17605 PF07977 FabA-like domain SAMA_RS17610 PF00535 Glycosyl transferase family 2 SAMA_RS17615 PF00221 Aromatic amino acid lyase SAMA_RS17635 PF04820 Tryptophan halogenase SAMA_RS17645 PF02801 Beta-ketoacyl synthase, C-terminal domain SAMA_RS17645 PF00109 Beta-ketoacyl synthase, N-terminal domain SAMA_RS17660 PF02801 Beta-ketoacyl synthase, C-terminal domain SAMA_RS17660 PF00109 Beta-ketoacyl synthase, N-terminal domain SAMA_RS17670 PF00072 Response regulator receiver domain SAMA_RS17675 PF00581 Rhodanese-like domain SAMA_RS17685 PF02525 Flavodoxin-like fold SAMA_RS17695 PF13180 PDZ domain SAMA_RS17700 PF09500 Putative thioesterase (yiiD_Cterm) SAMA_RS17700 PF00583 Acetyltransferase (GNAT) family SAMA_RS17705 PF02580 D-Tyr-tRNA(Tyr) deacylase SAMA_RS17710 PF00561 alpha/beta hydrolase fold SAMA_RS17715 PF03631 Virulence factor BrkB SAMA_RS17735 PF00563 EAL domain SAMA_RS17735 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS17735 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS17755 PF00593 TonB dependent receptor SAMA_RS17755 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS17765 PF04389 Peptidase family M28 SAMA_RS17765 PF04151 Bacterial pre-peptidase C-terminal domain SAMA_RS17770 PF00679 Elongation factor G C-terminus SAMA_RS17770 PF00009 Elongation factor Tu GTP binding domain SAMA_RS17770 PF03144 Elongation factor Tu domain 2 SAMA_RS17775 PF00120 Glutamine synthetase, catalytic domain SAMA_RS17775 PF03951 Glutamine synthetase, beta-Grasp domain SAMA_RS17790 PF01037 Lrp/AsnC ligand binding domain SAMA_RS17805 PF12867 DinB superfamily SAMA_RS17805 PF03781 Sulfatase-modifying factor enzyme 1 SAMA_RS17810 PF03806 AbgT putative transporter family SAMA_RS17815 PF06865 Pyrimidine/purine nucleoside phosphorylase SAMA_RS17825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS17825 PF00989 PAS fold SAMA_RS17825 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS17830 PF00072 Response regulator receiver domain SAMA_RS17830 PF00158 Sigma-54 interaction domain SAMA_RS17830 PF02954 Bacterial regulatory protein, Fis family SAMA_RS17845 PF01545 Cation efflux family SAMA_RS17845 PF16916 Dimerisation domain of Zinc Transporter SAMA_RS17855 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS17855 PF00072 Response regulator receiver domain SAMA_RS17860 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS17860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS17860 PF00672 HAMP domain SAMA_RS17860 PF16527 Two-component sensor protein CpxA, periplasmic domain SAMA_RS17865 PF02954 Bacterial regulatory protein, Fis family SAMA_RS17865 PF01590 GAF domain SAMA_RS17865 PF00158 Sigma-54 interaction domain SAMA_RS17870 PF00171 Aldehyde dehydrogenase family SAMA_RS17875 PF02625 XdhC and CoxI family SAMA_RS17875 PF13478 XdhC Rossmann domain SAMA_RS17885 PF00111 2Fe-2S iron-sulfur cluster binding domain SAMA_RS17885 PF01799 [2Fe-2S] binding domain SAMA_RS17890 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SAMA_RS17895 PF00588 SpoU rRNA Methylase family SAMA_RS17915 PF05193 Peptidase M16 inactive domain SAMA_RS17915 PF00675 Insulinase (Peptidase family M16) SAMA_RS17935 PF07690 Major Facilitator Superfamily SAMA_RS17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS17940 PF03466 LysR substrate binding domain SAMA_RS17975 PF05958 tRNA (Uracil-5-)-methyltransferase SAMA_RS17980 PF03544 Gram-negative bacterial TonB protein C-terminal SAMA_RS17985 PF13520 Amino acid permease SAMA_RS17990 PF01037 Lrp/AsnC ligand binding domain SAMA_RS17995 PF16582 Middle domain of thiamine pyrophosphate SAMA_RS17995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SAMA_RS17995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SAMA_RS18000 PF12697 Alpha/beta hydrolase family SAMA_RS18005 PF13378 Enolase C-terminal domain-like SAMA_RS18010 PF00501 AMP-binding enzyme SAMA_RS18020 PF04545 Sigma-70, region 4 SAMA_RS18020 PF04542 Sigma-70 region 2 SAMA_RS18020 PF00140 Sigma-70 factor, region 1.2 SAMA_RS18025 PF18075 FtsX extracellular domain SAMA_RS18030 PF00005 ABC transporter SAMA_RS18035 PF00448 SRP54-type protein, GTPase domain SAMA_RS18035 PF02881 SRP54-type protein, helical bundle domain SAMA_RS18050 PF03264 NapC/NirT cytochrome c family, N-terminal region SAMA_RS18065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SAMA_RS18065 PF00529 HlyD membrane-fusion protein of T1SS SAMA_RS18070 PF00873 AcrB/AcrD/AcrF family SAMA_RS18080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SAMA_RS18080 PF18029 Glyoxalase-like domain SAMA_RS18085 PF00042 Globin SAMA_RS18085 PF00970 Oxidoreductase FAD-binding domain SAMA_RS18085 PF00175 Oxidoreductase NAD-binding domain SAMA_RS18095 PF03222 Tryptophan/tyrosine permease family SAMA_RS18100 PF01553 Acyltransferase SAMA_RS18105 PF00717 Peptidase S24-like SAMA_RS18105 PF01726 LexA DNA binding domain SAMA_RS18115 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SAMA_RS18115 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SAMA_RS18120 PF00115 Cytochrome C and Quinol oxidase polypeptide I SAMA_RS18125 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 SAMA_RS18130 PF00510 Cytochrome c oxidase subunit III SAMA_RS18150 PF02628 Cytochrome oxidase assembly protein SAMA_RS18155 PF01040 UbiA prenyltransferase family SAMA_RS18160 PF02630 SCO1/SenC SAMA_RS18170 PF00072 Response regulator receiver domain SAMA_RS18175 PF09078 CheY binding SAMA_RS18175 PF02895 Signal transducing histidine kinase, homodimeric domain SAMA_RS18175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS18175 PF01627 Hpt domain SAMA_RS18175 PF01584 CheW-like domain SAMA_RS18180 PF01584 CheW-like domain SAMA_RS18185 PF00672 HAMP domain SAMA_RS18185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS18185 PF02203 Tar ligand binding domain homologue SAMA_RS18190 PF01739 CheR methyltransferase, SAM binding domain SAMA_RS18190 PF03705 CheR methyltransferase, all-alpha domain SAMA_RS18195 PF01339 CheB methylesterase SAMA_RS18195 PF00072 Response regulator receiver domain SAMA_RS18205 PF01554 MatE SAMA_RS18210 PF01106 NifU-like domain SAMA_RS18210 PF01521 Iron-sulphur cluster biosynthesis SAMA_RS18220 PF00156 Phosphoribosyl transferase domain SAMA_RS18225 PF00561 alpha/beta hydrolase fold SAMA_RS18235 PF00884 Sulfatase SAMA_RS18240 PF00575 S1 RNA binding domain SAMA_RS18240 PF09371 Tex-like protein N-terminal domain SAMA_RS18240 PF17674 HHH domain SAMA_RS18240 PF16921 Tex protein YqgF-like domain SAMA_RS18245 PF01272 Transcription elongation factor, GreA/GreB, C-term SAMA_RS18245 PF03449 Transcription elongation factor, N-terminal SAMA_RS18250 PF00072 Response regulator receiver domain SAMA_RS18250 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS18255 PF00672 HAMP domain SAMA_RS18255 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS18260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS18265 PF08534 Redoxin SAMA_RS18290 PF00294 pfkB family carbohydrate kinase SAMA_RS18300 PF03473 MOSC domain SAMA_RS18300 PF03475 3-alpha domain SAMA_RS18310 PF00672 HAMP domain SAMA_RS18310 PF02743 Cache domain SAMA_RS18310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS18320 PF06463 Molybdenum Cofactor Synthesis C SAMA_RS18320 PF04055 Radical SAM superfamily SAMA_RS18325 PF00994 Probable molybdopterin binding domain SAMA_RS18330 PF01967 MoaC family SAMA_RS18335 PF02597 ThiS family SAMA_RS18340 PF02391 MoaE protein SAMA_RS18350 PF00528 Binding-protein-dependent transport system inner membrane component SAMA_RS18355 PF00005 ABC transporter SAMA_RS18355 PF12857 TOBE-like domain SAMA_RS18355 PF17850 CysA C-terminal regulatory domain SAMA_RS18370 PF00072 Response regulator receiver domain SAMA_RS18370 PF00486 Transcriptional regulatory protein, C terminal SAMA_RS18375 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS18375 PF00672 HAMP domain SAMA_RS18375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS18380 PF00849 RNA pseudouridylate synthase SAMA_RS18385 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS18385 PF00072 Response regulator receiver domain SAMA_RS18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS18395 PF03466 LysR substrate binding domain SAMA_RS18405 PF02678 Pirin SAMA_RS18405 PF05726 Pirin C-terminal cupin domain SAMA_RS18415 PF07992 Pyridine nucleotide-disulphide oxidoreductase SAMA_RS18415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SAMA_RS18430 PF01432 Peptidase family M3 SAMA_RS18445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS18445 PF03466 LysR substrate binding domain SAMA_RS18450 PF01370 NAD dependent epimerase/dehydratase family SAMA_RS18465 PF00529 HlyD membrane-fusion protein of T1SS SAMA_RS18465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SAMA_RS18470 PF00873 AcrB/AcrD/AcrF family SAMA_RS18485 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SAMA_RS18490 PF04151 Bacterial pre-peptidase C-terminal domain SAMA_RS18490 PF00082 Subtilase family SAMA_RS18495 PF03806 AbgT putative transporter family SAMA_RS18500 PF04011 LemA family SAMA_RS18510 PF01551 Peptidase family M23 SAMA_RS18510 PF10145 Phage-related minor tail protein SAMA_RS18510 PF01464 Transglycosylase SLT domain SAMA_RS18515 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SAMA_RS18520 PF04445 Putative SAM-dependent methyltransferase SAMA_RS18525 PF00892 EamA-like transporter family SAMA_RS18530 PF01047 MarR family SAMA_RS18545 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SAMA_RS18545 PF18381 YcaO cyclodehydratase C-terminal domain SAMA_RS18555 PF00501 AMP-binding enzyme SAMA_RS18565 PF00005 ABC transporter SAMA_RS18565 PF13732 Domain of unknown function (DUF4162) SAMA_RS18575 PF00561 alpha/beta hydrolase fold SAMA_RS18580 PF00005 ABC transporter SAMA_RS18585 PF12679 ABC-2 family transporter protein SAMA_RS18600 PF00011 Hsp20/alpha crystallin family SAMA_RS18605 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS18605 PF05230 MASE2 domain SAMA_RS18630 PF09997 Predicted membrane protein (DUF2238) SAMA_RS18640 PF00005 ABC transporter SAMA_RS18645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SAMA_RS18650 PF13977 BetI-type transcriptional repressor, C-terminal SAMA_RS18650 PF00440 Bacterial regulatory proteins, tetR family SAMA_RS18665 PF12833 Helix-turn-helix domain SAMA_RS18665 PF02311 AraC-like ligand binding domain SAMA_RS18675 PF00072 Response regulator receiver domain SAMA_RS18685 PF00675 Insulinase (Peptidase family M16) SAMA_RS18685 PF05193 Peptidase M16 inactive domain SAMA_RS18695 PF02743 Cache domain SAMA_RS18695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SAMA_RS18695 PF00672 HAMP domain SAMA_RS18705 PF00563 EAL domain SAMA_RS18705 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS18705 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS18725 PF04055 Radical SAM superfamily SAMA_RS18725 PF06969 HemN C-terminal domain SAMA_RS18730 PF03466 LysR substrate binding domain SAMA_RS18730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SAMA_RS18735 PF00202 Aminotransferase class-III SAMA_RS18745 PF13247 4Fe-4S dicluster domain SAMA_RS18750 PF00384 Molybdopterin oxidoreductase SAMA_RS18750 PF01568 Molydopterin dinucleotide binding domain SAMA_RS18750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SAMA_RS18765 PF13247 4Fe-4S dicluster domain SAMA_RS18770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SAMA_RS18770 PF00384 Molybdopterin oxidoreductase SAMA_RS18770 PF01568 Molydopterin dinucleotide binding domain SAMA_RS18780 PF02613 Nitrate reductase delta subunit SAMA_RS18800 PF02634 FdhD/NarQ family SAMA_RS18810 PF05971 RNA methyltransferase SAMA_RS18815 PF03748 Flagellar basal body-associated protein FliL SAMA_RS18820 PF04345 Chorismate lyase SAMA_RS18825 PF05547 Immune inhibitor A peptidase M6 SAMA_RS18825 PF00801 PKD domain SAMA_RS18830 PF01204 Trehalase SAMA_RS18835 PF01914 MarC family integral membrane protein SAMA_RS18840 PF00563 EAL domain SAMA_RS18840 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS18840 PF08447 PAS fold SAMA_RS18840 PF08448 PAS fold SAMA_RS18855 PF01553 Acyltransferase SAMA_RS18860 PF01810 LysE type translocator SAMA_RS18865 PF00924 Mechanosensitive ion channel SAMA_RS18895 PF13746 4Fe-4S dicluster domain SAMA_RS18895 PF12801 4Fe-4S binding domain SAMA_RS18895 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SAMA_RS18905 PF00378 Enoyl-CoA hydratase/isomerase SAMA_RS18920 PF01380 SIS domain SAMA_RS18925 PF08220 DeoR-like helix-turn-helix domain SAMA_RS18925 PF00455 DeoR C terminal sensor domain SAMA_RS18930 PF00593 TonB dependent receptor SAMA_RS18930 PF07715 TonB-dependent Receptor Plug Domain SAMA_RS18935 PF00132 Bacterial transferase hexapeptide (six repeats) SAMA_RS18935 PF14602 Hexapeptide repeat of succinyl-transferase SAMA_RS18935 PF12804 MobA-like NTP transferase domain SAMA_RS18940 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SAMA_RS18940 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SAMA_RS18945 PF02874 ATP synthase alpha/beta family, beta-barrel domain SAMA_RS18945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SAMA_RS18950 PF00231 ATP synthase SAMA_RS18955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SAMA_RS18955 PF00306 ATP synthase alpha/beta chain, C terminal domain SAMA_RS18955 PF02874 ATP synthase alpha/beta family, beta-barrel domain SAMA_RS18960 PF00213 ATP synthase delta (OSCP) subunit SAMA_RS18965 PF00430 ATP synthase B/B' CF(0) SAMA_RS18970 PF00137 ATP synthase subunit C SAMA_RS18975 PF00119 ATP synthase A chain SAMA_RS18980 PF03899 ATP synthase I chain SAMA_RS18985 PF02195 ParB-like nuclease domain SAMA_RS18985 PF17762 HTH domain found in ParB protein SAMA_RS18990 PF13614 AAA domain SAMA_RS18995 PF02527 rRNA small subunit methyltransferase G SAMA_RS19000 PF01134 Glucose inhibited division protein A SAMA_RS19000 PF13932 GidA associated domain SAMA_RS19025 PF03692 Putative zinc- or iron-chelating domain SAMA_RS19030 PF05962 HutD SAMA_RS19040 PF04545 Sigma-70, region 4 SAMA_RS19040 PF03979 Sigma-70 factor, region 1.1 SAMA_RS19040 PF04546 Sigma-70, non-essential region SAMA_RS19040 PF04542 Sigma-70 region 2 SAMA_RS19040 PF04539 Sigma-70 region 3 SAMA_RS19040 PF00140 Sigma-70 factor, region 1.2 SAMA_RS19060 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS19060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS19060 PF00672 HAMP domain SAMA_RS19065 PF00082 Subtilase family SAMA_RS19075 PF13116 Protein of unknown function SAMA_RS19075 PF13502 AsmA-like C-terminal region SAMA_RS19080 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS19120 PF00512 His Kinase A (phospho-acceptor) domain SAMA_RS19120 PF00672 HAMP domain SAMA_RS19120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SAMA_RS19125 PF01464 Transglycosylase SLT domain SAMA_RS19130 PF12169 DNA polymerase III subunits gamma and tau domain III SAMA_RS19130 PF12170 DNA polymerase III tau subunit V interacting with alpha SAMA_RS19130 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SAMA_RS19160 PF01266 FAD dependent oxidoreductase SAMA_RS19170 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS19200 PF00583 Acetyltransferase (GNAT) family SAMA_RS19215 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS19215 PF05230 MASE2 domain SAMA_RS19225 PF03707 Bacterial signalling protein N terminal repeat SAMA_RS19225 PF00990 Diguanylate cyclase, GGDEF domain SAMA_RS19225 PF00563 EAL domain SAMA_RS19230 PF01209 ubiE/COQ5 methyltransferase family SAMA_RS19255 PF17151 Periplasmic sensor domain SAMA_RS19255 PF00990 Diguanylate cyclase, GGDEF domain