SAMA_RS00020	SM00829	Enoylreductase
SAMA_RS00055	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS00055	SM00760	Bacterial dnaA protein helix-turn-helix domain
SAMA_RS00060	SM00480	DNA polymerase III beta subunit
SAMA_RS00070	SM00387	Histidine kinase-like ATPases
SAMA_RS00070	SM00433	TopoisomeraseII
SAMA_RS00100	SM00797	Allophanate hydrolase subunit 2
SAMA_RS00105	SM00796	Allophanate hydrolase subunit 1
SAMA_RS00110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS00115	SM00836	DALR anticodon binding domain
SAMA_RS00140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS00175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SAMA_RS00210	SM00257	Lysin motif
SAMA_RS00295	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAMA_RS00295	SM00245	tail specific protease
SAMA_RS00310	SM00450	Rhodanese Homology Domain
SAMA_RS00330	SM00267	diguanylate cyclase
SAMA_RS00330	SM00448	cheY-homologous receiver domain
SAMA_RS00340	SM00387	Histidine kinase-like ATPases
SAMA_RS00340	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS00340	SM00448	cheY-homologous receiver domain
SAMA_RS00345	SM00852	Probable molybdopterin binding domain
SAMA_RS00385	SM00342	helix_turn_helix, arabinose operon control protein
SAMA_RS00385	SM00871	Bacterial transcription activator, effector binding domain
SAMA_RS00390	SM00422	helix_turn_helix, mercury resistance
SAMA_RS00410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAMA_RS00410	SM00866	SAMA_RS00410
SAMA_RS00415	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS00415	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS00415	SM00091	PAS domain
SAMA_RS00415	SM00267	diguanylate cyclase
SAMA_RS00435	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS00470	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SAMA_RS00470	SM00474	3'-5' exonuclease
SAMA_RS00470	SM00475	5'-3' exonuclease
SAMA_RS00470	SM00482	DNA polymerase A domain
SAMA_RS00485	SM00450	Rhodanese Homology Domain
SAMA_RS00490	SM00829	Enoylreductase
SAMA_RS00590	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SAMA_RS00590	SM01232	SAMA_RS00590
SAMA_RS00600	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS00605	SM00852	Probable molybdopterin binding domain
SAMA_RS00615	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS00630	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS00630	SM00448	cheY-homologous receiver domain
SAMA_RS00635	SM00387	Histidine kinase-like ATPases
SAMA_RS00635	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS00665	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS00690	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS00700	SM00852	Probable molybdopterin binding domain
SAMA_RS00720	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS00720	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS00720	SM00091	PAS domain
SAMA_RS00720	SM00267	diguanylate cyclase
SAMA_RS00740	SM00448	cheY-homologous receiver domain
SAMA_RS00740	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS00745	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS00750	SM00014	Acid phosphatase homologues
SAMA_RS00785	SM00448	cheY-homologous receiver domain
SAMA_RS00785	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS00790	SM00387	Histidine kinase-like ATPases
SAMA_RS00790	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS00795	SM00776	SAMA_RS00795
SAMA_RS00800	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS00820	SM00631	SAMA_RS00820
SAMA_RS00845	SM00363	S4 RNA-binding domain
SAMA_RS00860	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS00945	SM00563	Phosphate acyltransferases
SAMA_RS00955	SM00450	Rhodanese Homology Domain
SAMA_RS00985	SM00360	RNA recognition motif
SAMA_RS01065	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SAMA_RS01065	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SAMA_RS01070	SM00649	Ribosomal protein L11/L12
SAMA_RS01095	SM00663	RNA polymerase I subunit A N-terminus
SAMA_RS01110	SM00838	Elongation factor G C-terminus
SAMA_RS01110	SM00889	Elongation factor G, domain IV
SAMA_RS01120	SM01403	SAMA_RS01120
SAMA_RS01140	SM01382	SAMA_RS01140
SAMA_RS01140	SM01383	SAMA_RS01140
SAMA_RS01155	SM00322	K homology RNA-binding domain
SAMA_RS01175	SM01374	SAMA_RS01175
SAMA_RS01240	SM00363	S4 RNA-binding domain
SAMA_RS01240	SM01390	SAMA_RS01240
SAMA_RS01245	SM00662	RNA polymerases D
SAMA_RS01280	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS01290	SM00028	Tetratricopeptide repeats
SAMA_RS01365	SM00852	Probable molybdopterin binding domain
SAMA_RS01385	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SAMA_RS01425	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS01425	SM00954	Region found in RelA / SpoT proteins
SAMA_RS01430	SM01409	SAMA_RS01430
SAMA_RS01435	SM00072	Guanylate kinase homologues.
SAMA_RS01585	SM00354	helix_turn _helix lactose operon repressor
SAMA_RS01785	SM00341	Helicase and RNase D C-terminal
SAMA_RS01785	SM00487	DEAD-like helicases superfamily
SAMA_RS01785	SM00490	helicase superfamily c-terminal domain
SAMA_RS01785	SM00956	SAMA_RS01785
SAMA_RS01795	SM00917	LeuA allosteric (dimerisation) domain
SAMA_RS01800	SM01329	SAMA_RS01800
SAMA_RS01905	SM00842	Cell division protein FtsA
SAMA_RS01910	SM00864	Tubulin/FtsZ family, GTPase domain
SAMA_RS01910	SM00865	Tubulin/FtsZ family, C-terminal domain
SAMA_RS01930	SM00957	SecA DEAD-like domain
SAMA_RS01930	SM00958	SecA preprotein cross-linking domain
SAMA_RS02025	SM00644	SAMA_RS02025
SAMA_RS02035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAMA_RS02035	SM00895	SAMA_RS02035
SAMA_RS02055	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS02055	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS02055	SM00091	PAS domain
SAMA_RS02055	SM00267	diguanylate cyclase
SAMA_RS02085	SM00487	DEAD-like helicases superfamily
SAMA_RS02085	SM00490	helicase superfamily c-terminal domain
SAMA_RS02110	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS02110	SM00091	PAS domain
SAMA_RS02110	SM00267	diguanylate cyclase
SAMA_RS02115	SM00822	SAMA_RS02115
SAMA_RS02135	SM01276	SAMA_RS02135
SAMA_RS02140	SM01209	SAMA_RS02140
SAMA_RS02140	SM01210	SAMA_RS02140
SAMA_RS02145	SM00798	AICARFT/IMPCHase bienzyme
SAMA_RS02145	SM00851	MGS-like domain
SAMA_RS02150	SM00422	helix_turn_helix, mercury resistance
SAMA_RS02200	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS02245	SM00244	prohibitin homologues
SAMA_RS02250	SM00244	prohibitin homologues
SAMA_RS02290	SM00062	Bacterial periplasmic substrate-binding proteins
SAMA_RS02310	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SAMA_RS02320	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS02330	SM00267	diguanylate cyclase
SAMA_RS02345	SM00855	Phosphoglycerate mutase family
SAMA_RS02355	SM00448	cheY-homologous receiver domain
SAMA_RS02355	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS02370	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS02370	SM01086	C-terminal, D2-small domain, of ClpB protein
SAMA_RS02385	SM00836	DALR anticodon binding domain
SAMA_RS02385	SM01016	Arginyl tRNA synthetase N terminal dom
SAMA_RS02395	SM00487	DEAD-like helicases superfamily
SAMA_RS02395	SM00490	helicase superfamily c-terminal domain
SAMA_RS02410	SM00919	Malic enzyme, NAD binding domain
SAMA_RS02410	SM01274	SAMA_RS02410
SAMA_RS02415	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS02415	SM00267	diguanylate cyclase
SAMA_RS02440	SM00965	Secretin and TonB N terminus short domain
SAMA_RS02450	SM00028	Tetratricopeptide repeats
SAMA_RS02455	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS02525	SM00316	Ribosomal protein S1-like RNA-binding domain
SAMA_RS02550	SM00829	Enoylreductase
SAMA_RS02600	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS02645	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SAMA_RS02650	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SAMA_RS02660	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS02660	SM00267	diguanylate cyclase
SAMA_RS02665	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS02665	SM01027	Beta-Casp domain
SAMA_RS02690	SM00098	Alkaline phosphatase homologues
SAMA_RS02735	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS02740	SM00487	DEAD-like helicases superfamily
SAMA_RS02740	SM00490	helicase superfamily c-terminal domain
SAMA_RS02770	SM00882	Coenzyme A transferase
SAMA_RS02775	SM00882	Coenzyme A transferase
SAMA_RS02790	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS02790	SM00448	cheY-homologous receiver domain
SAMA_RS02795	SM00387	Histidine kinase-like ATPases
SAMA_RS02795	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS02795	SM00448	cheY-homologous receiver domain
SAMA_RS02810	SM00062	Bacterial periplasmic substrate-binding proteins
SAMA_RS02840	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS02840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS02845	SM00829	Enoylreductase
SAMA_RS02885	SM00220	Serine/Threonine protein kinases, catalytic domain
SAMA_RS02915	SM00387	Histidine kinase-like ATPases
SAMA_RS02930	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS02940	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS02940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS02955	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS03010	SM00354	helix_turn _helix lactose operon repressor
SAMA_RS03045	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS03045	SM00267	diguanylate cyclase
SAMA_RS03050	SM00098	Alkaline phosphatase homologues
SAMA_RS03070	SM00731	SprT homologues.
SAMA_RS03085	SM00878	Biotin carboxylase C-terminal domain
SAMA_RS03100	SM00267	diguanylate cyclase
SAMA_RS03100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS03105	SM00838	Elongation factor G C-terminus
SAMA_RS03105	SM00889	Elongation factor G, domain IV
SAMA_RS03130	SM00900	SAMA_RS03130
SAMA_RS03170	SM01321	SAMA_RS03170
SAMA_RS03195	SM00448	cheY-homologous receiver domain
SAMA_RS03195	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS03215	SM00344	helix_turn_helix ASNC type
SAMA_RS03225	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS03290	SM00267	diguanylate cyclase
SAMA_RS03305	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS03305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS03335	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAMA_RS03350	SM00387	Histidine kinase-like ATPases
SAMA_RS03350	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS03355	SM00448	cheY-homologous receiver domain
SAMA_RS03355	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS03400	SM00320	WD40 repeats
SAMA_RS03410	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS03410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS03425	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS03425	SM00448	cheY-homologous receiver domain
SAMA_RS03430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS03430	SM00387	Histidine kinase-like ATPases
SAMA_RS03450	SM00938	Nitrogen regulatory protein P-II
SAMA_RS03465	SM00028	Tetratricopeptide repeats
SAMA_RS03470	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS03470	SM00091	PAS domain
SAMA_RS03470	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS03490	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS03530	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS03590	SM00530	Helix-turn-helix XRE-family like proteins 
SAMA_RS03625	SM00248	ankyrin repeats
SAMA_RS03685	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS03720	SM00858	SAMA_RS03720
SAMA_RS03730	SM00240	Forkhead associated domain
SAMA_RS03750	SM00028	Tetratricopeptide repeats
SAMA_RS03820	SM00257	Lysin motif
SAMA_RS03825	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAMA_RS03825	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS03835	SM01091	Transporter associated domain
SAMA_RS03910	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SAMA_RS03925	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS03925	SM00091	PAS domain
SAMA_RS03925	SM00387	Histidine kinase-like ATPases
SAMA_RS03925	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS03925	SM00448	cheY-homologous receiver domain
SAMA_RS03925	SM01079	SAMA_RS03925
SAMA_RS03930	SM00267	diguanylate cyclase
SAMA_RS03930	SM00448	cheY-homologous receiver domain
SAMA_RS03940	SM01060	SAMA_RS03940
SAMA_RS03950	SM00487	DEAD-like helicases superfamily
SAMA_RS03950	SM00490	helicase superfamily c-terminal domain
SAMA_RS03985	SM01018	B12 binding domain
SAMA_RS03990	SM00855	Phosphoglycerate mutase family
SAMA_RS03995	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS04030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS04030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS04055	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS04110	SM00267	diguanylate cyclase
SAMA_RS04135	SM00530	Helix-turn-helix XRE-family like proteins 
SAMA_RS04215	SM00244	prohibitin homologues
SAMA_RS04235	SM00487	DEAD-like helicases superfamily
SAMA_RS04235	SM00490	helicase superfamily c-terminal domain
SAMA_RS04240	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS04240	SM00448	cheY-homologous receiver domain
SAMA_RS04320	SM00400	zinc finger
SAMA_RS04320	SM00493	SAMA_RS04320
SAMA_RS04320	SM00766	DNA primase DnaG DnaB-binding
SAMA_RS04340	SM01207	SAMA_RS04340
SAMA_RS04345	SM00905	Dihydroneopterin aldolase
SAMA_RS04375	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS04435	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS04490	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS04495	SM00073	Histidine Phosphotransfer domain
SAMA_RS04510	SM00927	DNA mismatch repair enzyme MutH
SAMA_RS04520	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAMA_RS04590	SM00838	Elongation factor G C-terminus
SAMA_RS04600	SM00358	Double-stranded RNA binding motif
SAMA_RS04600	SM00535	Ribonuclease III family
SAMA_RS04630	SM01091	Transporter associated domain
SAMA_RS04640	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS04640	SM00962	SRP54-type protein, GTPase domain
SAMA_RS04640	SM00963	SRP54-type protein, helical bundle domain
SAMA_RS04670	SM00830	Chorismate mutase type II
SAMA_RS04690	SM00830	Chorismate mutase type II
SAMA_RS04740	SM00387	Histidine kinase-like ATPases
SAMA_RS04740	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS04740	SM00448	cheY-homologous receiver domain
SAMA_RS04745	SM00448	cheY-homologous receiver domain
SAMA_RS04795	SM01321	SAMA_RS04795
SAMA_RS04805	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SAMA_RS04820	SM00904	Riboflavin kinase
SAMA_RS04880	SM00938	Nitrogen regulatory protein P-II
SAMA_RS04890	SM00354	helix_turn _helix lactose operon repressor
SAMA_RS04915	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS04915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS04920	SM01081	Putative carbohydrate binding domain
SAMA_RS04965	SM00867	YceI-like domain 
SAMA_RS04975	SM01103	SAMA_RS04975
SAMA_RS04985	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS05025	SM00316	Ribosomal protein S1-like RNA-binding domain
SAMA_RS05045	SM01387	SAMA_RS05045
SAMA_RS05050	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS05050	SM00267	diguanylate cyclase
SAMA_RS05055	SM00316	Ribosomal protein S1-like RNA-binding domain
SAMA_RS05055	SM00322	K homology RNA-binding domain
SAMA_RS05060	SM00028	Tetratricopeptide repeats
SAMA_RS05085	SM01133	SAMA_RS05085
SAMA_RS05090	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SAMA_RS05125	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS05135	SM00448	cheY-homologous receiver domain
SAMA_RS05135	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS05145	SM00073	Histidine Phosphotransfer domain
SAMA_RS05145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS05145	SM00387	Histidine kinase-like ATPases
SAMA_RS05145	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS05145	SM00448	cheY-homologous receiver domain
SAMA_RS05170	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAMA_RS05175	SM00563	Phosphate acyltransferases
SAMA_RS05185	SM00387	Histidine kinase-like ATPases
SAMA_RS05195	SM00091	PAS domain
SAMA_RS05195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS05250	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS05250	SM00267	diguanylate cyclase
SAMA_RS05275	SM00062	Bacterial periplasmic substrate-binding proteins
SAMA_RS05285	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS05340	SM00244	prohibitin homologues
SAMA_RS05375	SM00073	Histidine Phosphotransfer domain
SAMA_RS05375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS05375	SM00387	Histidine kinase-like ATPases
SAMA_RS05375	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS05375	SM00448	cheY-homologous receiver domain
SAMA_RS05385	SM00954	Region found in RelA / SpoT proteins
SAMA_RS05400	SM01192	SAMA_RS05400
SAMA_RS05400	SM01193	SAMA_RS05400
SAMA_RS05435	SM00257	Lysin motif
SAMA_RS05445	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SAMA_RS05445	SM00534	ATPase domain of DNA mismatch repair MUTS family
SAMA_RS05450	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS05460	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SAMA_RS05570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAMA_RS05570	SM00267	diguanylate cyclase
SAMA_RS05580	SM01001	AIR carboxylase
SAMA_RS05610	SM00062	Bacterial periplasmic substrate-binding proteins
SAMA_RS05630	SM00448	cheY-homologous receiver domain
SAMA_RS05630	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS05635	SM00091	PAS domain
SAMA_RS05635	SM00387	Histidine kinase-like ATPases
SAMA_RS05635	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS05650	SM01263	SAMA_RS05650
SAMA_RS05665	SM00924	MgtE intracellular N domain
SAMA_RS05680	SM00267	diguanylate cyclase
SAMA_RS05715	SM00782	PhnA Zinc-Ribbon
SAMA_RS05780	SM00448	cheY-homologous receiver domain
SAMA_RS05780	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS05785	SM00387	Histidine kinase-like ATPases
SAMA_RS05785	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS05800	SM00855	Phosphoglycerate mutase family
SAMA_RS05835	SM00825	Beta-ketoacyl synthase
SAMA_RS05840	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SAMA_RS05845	SM00822	SAMA_RS05845
SAMA_RS05845	SM00825	Beta-ketoacyl synthase
SAMA_RS05845	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SAMA_RS05860	SM00838	Elongation factor G C-terminus
SAMA_RS05860	SM00889	Elongation factor G, domain IV
SAMA_RS05960	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS06005	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAMA_RS06015	SM00935	Outer membrane protein (OmpH-like)
SAMA_RS06045	SM00481	DNA polymerase alpha chain like domain
SAMA_RS06050	SM00977	TilS substrate C-terminal domain
SAMA_RS06065	SM00267	diguanylate cyclase
SAMA_RS06085	SM00267	diguanylate cyclase
SAMA_RS06115	SM00528	Domain in histone-like proteins of HNS family
SAMA_RS06130	SM00893	Electron transfer flavoprotein domain
SAMA_RS06135	SM00893	Electron transfer flavoprotein domain
SAMA_RS06155	SM01230	SAMA_RS06155
SAMA_RS06165	SM00507	HNH nucleases
SAMA_RS06175	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS06220	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS06250	SM00420	helix_turn_helix, Deoxyribose operon repressor
SAMA_RS06250	SM01134	SAMA_RS06250
SAMA_RS06295	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAMA_RS06295	SM00267	diguanylate cyclase
SAMA_RS06300	SM00986	Uracil DNA glycosylase superfamily
SAMA_RS06300	SM00987	UreE urease accessory protein, C-terminal domain 
SAMA_RS06310	SM01351	SAMA_RS06310
SAMA_RS06355	SM00899	SAMA_RS06355
SAMA_RS06390	SM00840	SAMA_RS06390
SAMA_RS06425	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS06425	SM00994	ClpX C4-type zinc finger
SAMA_RS06425	SM01086	C-terminal, D2-small domain, of ClpB protein
SAMA_RS06430	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS06430	SM00464	Found in ATP-dependent protease La (LON)
SAMA_RS06435	SM00411	bacterial (prokaryotic) histone like domain
SAMA_RS06445	SM00986	Uracil DNA glycosylase superfamily
SAMA_RS06445	SM00987	UreE urease accessory protein, C-terminal domain 
SAMA_RS06455	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS06480	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS06515	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAMA_RS06545	SM00491	SAMA_RS06545
SAMA_RS06550	SM00486	DNA polymerase type-B family
SAMA_RS06565	SM00028	Tetratricopeptide repeats
SAMA_RS06600	SM00267	diguanylate cyclase
SAMA_RS06670	SM00487	DEAD-like helicases superfamily
SAMA_RS06670	SM00490	helicase superfamily c-terminal domain
SAMA_RS06710	SM00448	cheY-homologous receiver domain
SAMA_RS06710	SM00850	LytTr DNA-binding domain
SAMA_RS06715	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAMA_RS06785	SM00271	DnaJ molecular chaperone homology domain
SAMA_RS06805	SM00562	SAMA_RS06805
SAMA_RS06855	SM00493	SAMA_RS06855
SAMA_RS06860	SM00387	Histidine kinase-like ATPases
SAMA_RS06885	SM01321	SAMA_RS06885
SAMA_RS06895	SM00634	Bacterial Ig-like domain (group 1)
SAMA_RS06905	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SAMA_RS06905	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SAMA_RS06905	SM00493	SAMA_RS06905
SAMA_RS06945	SM00487	DEAD-like helicases superfamily
SAMA_RS06945	SM00490	helicase superfamily c-terminal domain
SAMA_RS06945	SM00982	SAMA_RS06945
SAMA_RS06945	SM01058	CarD-like/TRCF domain
SAMA_RS06960	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS06975	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS06980	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS07075	SM00882	Coenzyme A transferase
SAMA_RS07080	SM00882	Coenzyme A transferase
SAMA_RS07090	SM00878	Biotin carboxylase C-terminal domain
SAMA_RS07110	SM00422	helix_turn_helix, mercury resistance
SAMA_RS07120	SM01350	SAMA_RS07120
SAMA_RS07200	SM00822	SAMA_RS07200
SAMA_RS07225	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS07295	SM00354	helix_turn _helix lactose operon repressor
SAMA_RS07345	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS07370	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS07385	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS07430	SM00861	Transketolase, pyrimidine binding domain
SAMA_RS07445	SM00881	CoA binding domain
SAMA_RS07485	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS07485	SM00876	Biotin and Thiamin Synthesis associated domain
SAMA_RS07520	SM00028	Tetratricopeptide repeats
SAMA_RS07525	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS07530	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAMA_RS07590	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS07605	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
SAMA_RS07640	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS07685	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SAMA_RS07730	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS07745	SM00905	Dihydroneopterin aldolase
SAMA_RS07835	SM00450	Rhodanese Homology Domain
SAMA_RS07835	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS07860	SM00267	diguanylate cyclase
SAMA_RS07860	SM00448	cheY-homologous receiver domain
SAMA_RS07880	SM00771	ZipA, C-terminal domain (FtsZ-binding)
SAMA_RS07885	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAMA_RS07885	SM00292	breast cancer carboxy-terminal domain
SAMA_RS07885	SM00532	Ligase N family
SAMA_RS07900	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS07925	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAMA_RS07930	SM00479	SAMA_RS07930
SAMA_RS07945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAMA_RS07945	SM00895	SAMA_RS07945
SAMA_RS07960	SM01130	SAMA_RS07960
SAMA_RS07975	SM01011	Aminopeptidase P, N-terminal domain
SAMA_RS08025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS08030	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
SAMA_RS08035	SM00387	Histidine kinase-like ATPases
SAMA_RS08040	SM00448	cheY-homologous receiver domain
SAMA_RS08040	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS08050	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS08070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS08070	SM00387	Histidine kinase-like ATPases
SAMA_RS08075	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS08075	SM00448	cheY-homologous receiver domain
SAMA_RS08085	SM00342	helix_turn_helix, arabinose operon control protein
SAMA_RS08100	SM00267	diguanylate cyclase
SAMA_RS08140	SM01321	SAMA_RS08140
SAMA_RS08250	SM00945	ProQ/FINO family
SAMA_RS08255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAMA_RS08255	SM00245	tail specific protease
SAMA_RS08345	SM00981	SAMA_RS08345
SAMA_RS08355	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS08385	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS08385	SM00448	cheY-homologous receiver domain
SAMA_RS08390	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAMA_RS08390	SM00465	GIY-YIG type nucleases (URI domain)
SAMA_RS08420	SM00411	bacterial (prokaryotic) histone like domain
SAMA_RS08455	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAMA_RS08460	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS08460	SM00487	DEAD-like helicases superfamily
SAMA_RS08460	SM00490	helicase superfamily c-terminal domain
SAMA_RS08460	SM00847	Helicase associated domain (HA2)  Add an annotation
SAMA_RS08475	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SAMA_RS08490	SM01150	SAMA_RS08490
SAMA_RS08510	SM00344	helix_turn_helix ASNC type
SAMA_RS08580	SM00947	Carbonic anhydrase
SAMA_RS08635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS08635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS08635	SM01049	SAMA_RS08635
SAMA_RS08645	SM00354	helix_turn _helix lactose operon repressor
SAMA_RS08665	SM00642	Alpha-amylase domain
SAMA_RS08670	SM00642	Alpha-amylase domain
SAMA_RS08680	SM00642	Alpha-amylase domain
SAMA_RS08705	SM00990	SAMA_RS08705
SAMA_RS08710	SM00267	diguanylate cyclase
SAMA_RS08845	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS08850	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS08865	SM00841	Elongation factor P, C-terminal
SAMA_RS08865	SM01185	SAMA_RS08865
SAMA_RS08920	SM00861	Transketolase, pyrimidine binding domain
SAMA_RS08935	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS08935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS08960	SM00448	cheY-homologous receiver domain
SAMA_RS08960	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS08965	SM00631	SAMA_RS08965
SAMA_RS08980	SM00870	SAMA_RS08980
SAMA_RS09025	SM00434	DNA Topoisomerase IV
SAMA_RS09050	SM00316	Ribosomal protein S1-like RNA-binding domain
SAMA_RS09055	SM00411	bacterial (prokaryotic) histone like domain
SAMA_RS09070	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SAMA_RS09105	SM00155	Phospholipase D. Active site motifs.
SAMA_RS09110	SM01144	SAMA_RS09110
SAMA_RS09155	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAMA_RS09170	SM00267	diguanylate cyclase
SAMA_RS09175	SM00881	CoA binding domain
SAMA_RS09210	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SAMA_RS09235	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SAMA_RS09235	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SAMA_RS09240	SM00344	helix_turn_helix ASNC type
SAMA_RS09245	SM00843	SAMA_RS09245
SAMA_RS09255	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS09305	SM00422	helix_turn_helix, mercury resistance
SAMA_RS09325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS09380	SM00100	Cyclic nucleotide-monophosphate binding domain
SAMA_RS09380	SM00419	helix_turn_helix, cAMP Regulatory protein
SAMA_RS09425	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SAMA_RS09435	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SAMA_RS09485	SM00463	Small MutS-related domain
SAMA_RS09500	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS09500	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAMA_RS09500	SM00267	diguanylate cyclase
SAMA_RS09550	SM00487	DEAD-like helicases superfamily
SAMA_RS09550	SM00490	helicase superfamily c-terminal domain
SAMA_RS09580	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS09580	SM00267	diguanylate cyclase
SAMA_RS09605	SM00900	SAMA_RS09605
SAMA_RS09615	SM00478	endonuclease III
SAMA_RS09615	SM00525	SAMA_RS09615
SAMA_RS09630	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS09635	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAMA_RS09655	SM00062	Bacterial periplasmic substrate-binding proteins
SAMA_RS09655	SM00267	diguanylate cyclase
SAMA_RS09715	SM00876	Biotin and Thiamin Synthesis associated domain
SAMA_RS09755	SM00481	DNA polymerase alpha chain like domain
SAMA_RS09770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS09770	SM00387	Histidine kinase-like ATPases
SAMA_RS09770	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS09800	SM00387	Histidine kinase-like ATPases
SAMA_RS09805	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS09805	SM00448	cheY-homologous receiver domain
SAMA_RS09845	SM00479	SAMA_RS09845
SAMA_RS09865	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS09870	SM00257	Lysin motif
SAMA_RS09895	SM00062	Bacterial periplasmic substrate-binding proteins
SAMA_RS09900	SM00267	diguanylate cyclase
SAMA_RS09900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS09925	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS09940	SM00460	Transglutaminase/protease-like homologues
SAMA_RS09985	SM01130	SAMA_RS09985
SAMA_RS10050	SM00763	PrkA AAA domain
SAMA_RS10065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAMA_RS10110	SM00341	Helicase and RNase D C-terminal
SAMA_RS10110	SM00474	3'-5' exonuclease
SAMA_RS10145	SM00487	DEAD-like helicases superfamily
SAMA_RS10145	SM00491	SAMA_RS10145
SAMA_RS10190	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAMA_RS10190	SM00267	diguanylate cyclase
SAMA_RS10200	SM00411	bacterial (prokaryotic) histone like domain
SAMA_RS10205	SM00873	B3/4 domain
SAMA_RS10205	SM00874	tRNA synthetase B5 domain
SAMA_RS10205	SM00896	Ferredoxin-fold anticodon binding domain
SAMA_RS10215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS10220	SM00091	PAS domain
SAMA_RS10240	SM00867	YceI-like domain 
SAMA_RS10245	SM00357	Cold shock protein domain
SAMA_RS10270	SM00316	Ribosomal protein S1-like RNA-binding domain
SAMA_RS10285	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS10290	SM00357	Cold shock protein domain
SAMA_RS10305	SM00479	SAMA_RS10305
SAMA_RS10330	SM00825	Beta-ketoacyl synthase
SAMA_RS10340	SM00822	SAMA_RS10340
SAMA_RS10345	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SAMA_RS10380	SM00363	S4 RNA-binding domain
SAMA_RS10385	SM00316	Ribosomal protein S1-like RNA-binding domain
SAMA_RS10410	SM00226	Low molecular weight phosphatase family
SAMA_RS10445	SM00267	diguanylate cyclase
SAMA_RS10455	SM00327	von Willebrand factor (vWF) type A domain
SAMA_RS10455	SM00609	Vault protein Inter-alpha-Trypsin domain
SAMA_RS10465	SM00448	cheY-homologous receiver domain
SAMA_RS10465	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS10470	SM00387	Histidine kinase-like ATPases
SAMA_RS10470	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS10520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAMA_RS10600	SM00260	Two component signalling adaptor domain
SAMA_RS10600	SM00448	cheY-homologous receiver domain
SAMA_RS10615	SM00464	Found in ATP-dependent protease La (LON)
SAMA_RS10715	SM00316	Ribosomal protein S1-like RNA-binding domain
SAMA_RS10720	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS10720	SM01086	C-terminal, D2-small domain, of ClpB protein
SAMA_RS10765	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
SAMA_RS10775	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SAMA_RS10785	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAMA_RS10820	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS10820	SM00448	cheY-homologous receiver domain
SAMA_RS10830	SM00387	Histidine kinase-like ATPases
SAMA_RS10830	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS10830	SM00448	cheY-homologous receiver domain
SAMA_RS10840	SM00487	DEAD-like helicases superfamily
SAMA_RS10840	SM00490	helicase superfamily c-terminal domain
SAMA_RS10850	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAMA_RS10850	SM00387	Histidine kinase-like ATPases
SAMA_RS10945	SM00479	SAMA_RS10945
SAMA_RS11060	SM00710	Parallel beta-helix repeats
SAMA_RS11070	SM00342	helix_turn_helix, arabinose operon control protein
SAMA_RS11085	SM00822	SAMA_RS11085
SAMA_RS11100	SM00363	S4 RNA-binding domain
SAMA_RS11120	SM00481	DNA polymerase alpha chain like domain
SAMA_RS11180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS11180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS11190	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS11205	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SAMA_RS11205	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SAMA_RS11205	SM00493	SAMA_RS11205
SAMA_RS11245	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SAMA_RS11255	SM00825	Beta-ketoacyl synthase
SAMA_RS11290	SM00463	Small MutS-related domain
SAMA_RS11295	SM00855	Phosphoglycerate mutase family
SAMA_RS11305	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS11305	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS11305	SM00091	PAS domain
SAMA_RS11305	SM00267	diguanylate cyclase
SAMA_RS11345	SM00327	von Willebrand factor (vWF) type A domain
SAMA_RS11350	SM00028	Tetratricopeptide repeats
SAMA_RS11350	SM00327	von Willebrand factor (vWF) type A domain
SAMA_RS11405	SM00450	Rhodanese Homology Domain
SAMA_RS11415	SM01322	SAMA_RS11415
SAMA_RS11425	SM00450	Rhodanese Homology Domain
SAMA_RS11445	SM01323	SAMA_RS11445
SAMA_RS11490	SM00260	Two component signalling adaptor domain
SAMA_RS11490	SM00448	cheY-homologous receiver domain
SAMA_RS11495	SM00155	Phospholipase D. Active site motifs.
SAMA_RS11500	SM00404	Protein tyrosine phosphatase, catalytic domain motif
SAMA_RS11510	SM00342	helix_turn_helix, arabinose operon control protein
SAMA_RS11510	SM00478	endonuclease III
SAMA_RS11510	SM01009	AlkA N-terminal domain
SAMA_RS11515	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS11605	SM00387	Histidine kinase-like ATPases
SAMA_RS11605	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS11610	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS11610	SM00448	cheY-homologous receiver domain
SAMA_RS11645	SM00091	PAS domain
SAMA_RS11645	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS11710	SM00481	DNA polymerase alpha chain like domain
SAMA_RS11725	SM00984	UDP binding domain
SAMA_RS11840	SM00984	UDP binding domain
SAMA_RS11865	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SAMA_RS11875	SM00448	cheY-homologous receiver domain
SAMA_RS11900	SM00260	Two component signalling adaptor domain
SAMA_RS11905	SM00260	Two component signalling adaptor domain
SAMA_RS11920	SM00448	cheY-homologous receiver domain
SAMA_RS11925	SM00073	Histidine Phosphotransfer domain
SAMA_RS11925	SM00260	Two component signalling adaptor domain
SAMA_RS11925	SM00387	Histidine kinase-like ATPases
SAMA_RS11925	SM01231	SAMA_RS11925
SAMA_RS11935	SM00448	cheY-homologous receiver domain
SAMA_RS11950	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS11950	SM00962	SRP54-type protein, GTPase domain
SAMA_RS12010	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS12035	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS12035	SM00448	cheY-homologous receiver domain
SAMA_RS12040	SM00091	PAS domain
SAMA_RS12040	SM00387	Histidine kinase-like ATPases
SAMA_RS12040	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS12045	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS12090	SM00047	Lysozyme subfamily 2
SAMA_RS12135	SM00138	Methyltransferase, chemotaxis proteins 
SAMA_RS12140	SM00260	Two component signalling adaptor domain
SAMA_RS12140	SM00448	cheY-homologous receiver domain
SAMA_RS12145	SM00858	SAMA_RS12145
SAMA_RS12180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS12180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS12180	SM01049	SAMA_RS12180
SAMA_RS12220	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAMA_RS12270	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS12300	SM01211	SAMA_RS12300
SAMA_RS12305	SM00062	Bacterial periplasmic substrate-binding proteins
SAMA_RS12340	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAMA_RS12340	SM01240	SAMA_RS12340
SAMA_RS12350	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS12355	SM00564	beta-propeller repeat
SAMA_RS12380	SM00028	Tetratricopeptide repeats
SAMA_RS12425	SM00267	diguanylate cyclase
SAMA_RS12455	SM00028	Tetratricopeptide repeats
SAMA_RS12455	SM00267	diguanylate cyclase
SAMA_RS12530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS12540	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS12540	SM00448	cheY-homologous receiver domain
SAMA_RS12545	SM00387	Histidine kinase-like ATPases
SAMA_RS12545	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS12565	SM00487	DEAD-like helicases superfamily
SAMA_RS12565	SM00490	helicase superfamily c-terminal domain
SAMA_RS12570	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS12570	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS12570	SM00091	PAS domain
SAMA_RS12570	SM00267	diguanylate cyclase
SAMA_RS12605	SM01321	SAMA_RS12605
SAMA_RS12620	SM00245	tail specific protease
SAMA_RS12630	SM00028	Tetratricopeptide repeats
SAMA_RS12635	SM00267	diguanylate cyclase
SAMA_RS12645	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SAMA_RS12645	SM00475	5'-3' exonuclease
SAMA_RS12660	SM01329	SAMA_RS12660
SAMA_RS12700	SM00981	SAMA_RS12700
SAMA_RS12725	SM00861	Transketolase, pyrimidine binding domain
SAMA_RS12780	SM00487	DEAD-like helicases superfamily
SAMA_RS12780	SM00490	helicase superfamily c-terminal domain
SAMA_RS12785	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS12785	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS12785	SM00091	PAS domain
SAMA_RS12785	SM00267	diguanylate cyclase
SAMA_RS12805	SM00642	Alpha-amylase domain
SAMA_RS12810	SM00642	Alpha-amylase domain
SAMA_RS12910	SM00732	Likely ribonuclease with RNase H fold.
SAMA_RS12925	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS12945	SM01152	SAMA_RS12945
SAMA_RS12960	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS12995	SM00478	endonuclease III
SAMA_RS12995	SM00525	SAMA_RS12995
SAMA_RS13025	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS13060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS13060	SM01358	SAMA_RS13060
SAMA_RS13065	SM00851	MGS-like domain
SAMA_RS13065	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SAMA_RS13070	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SAMA_RS13090	SM00342	helix_turn_helix, arabinose operon control protein
SAMA_RS13100	SM00271	DnaJ molecular chaperone homology domain
SAMA_RS13130	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SAMA_RS13180	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SAMA_RS13190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS13190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS13205	SM00267	diguanylate cyclase
SAMA_RS13235	SM00900	SAMA_RS13235
SAMA_RS13380	SM00937	SAMA_RS13380
SAMA_RS13400	SM01400	SAMA_RS13400
SAMA_RS13455	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS13470	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAMA_RS13470	SM01091	Transporter associated domain
SAMA_RS13480	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS13480	SM00448	cheY-homologous receiver domain
SAMA_RS13540	SM00936	Penicillin-binding protein 5, C-terminal domain 
SAMA_RS13555	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS13620	SM01321	SAMA_RS13620
SAMA_RS13625	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS13625	SM01086	C-terminal, D2-small domain, of ClpB protein
SAMA_RS13635	SM00363	S4 RNA-binding domain
SAMA_RS13665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS13665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS13670	SM00267	diguanylate cyclase
SAMA_RS13675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS13675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS13675	SM01358	SAMA_RS13675
SAMA_RS13700	SM00363	S4 RNA-binding domain
SAMA_RS13710	SM00860	SMI1 / KNR4 family
SAMA_RS13735	SM00919	Malic enzyme, NAD binding domain
SAMA_RS13735	SM01274	SAMA_RS13735
SAMA_RS13745	SM00028	Tetratricopeptide repeats
SAMA_RS13745	SM00267	diguanylate cyclase
SAMA_RS13750	SM00062	Bacterial periplasmic substrate-binding proteins
SAMA_RS13805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS13805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS13835	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS13850	SM01230	SAMA_RS13850
SAMA_RS13865	SM00530	Helix-turn-helix XRE-family like proteins 
SAMA_RS13915	SM00900	SAMA_RS13915
SAMA_RS14000	SM01118	SAMA_RS14000
SAMA_RS14030	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS14035	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS14065	SM00100	Cyclic nucleotide-monophosphate binding domain
SAMA_RS14065	SM00419	helix_turn_helix, cAMP Regulatory protein
SAMA_RS14075	SM00487	DEAD-like helicases superfamily
SAMA_RS14075	SM00490	helicase superfamily c-terminal domain
SAMA_RS14090	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAMA_RS14095	SM01022	SAMA_RS14095
SAMA_RS14115	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SAMA_RS14130	SM00448	cheY-homologous receiver domain
SAMA_RS14130	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS14135	SM00387	Histidine kinase-like ATPases
SAMA_RS14135	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS14180	SM00829	Enoylreductase
SAMA_RS14195	SM00342	helix_turn_helix, arabinose operon control protein
SAMA_RS14210	SM00342	helix_turn_helix, arabinose operon control protein
SAMA_RS14220	SM00530	Helix-turn-helix XRE-family like proteins 
SAMA_RS14290	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS14300	SM00422	helix_turn_helix, mercury resistance
SAMA_RS14345	SM00487	DEAD-like helicases superfamily
SAMA_RS14345	SM00490	helicase superfamily c-terminal domain
SAMA_RS14365	SM00091	PAS domain
SAMA_RS14380	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS14425	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SAMA_RS14430	SM00861	Transketolase, pyrimidine binding domain
SAMA_RS14445	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS14610	SM00861	Transketolase, pyrimidine binding domain
SAMA_RS14635	SM00448	cheY-homologous receiver domain
SAMA_RS14635	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS14640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS14640	SM00387	Histidine kinase-like ATPases
SAMA_RS14640	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS14655	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS14700	SM00271	DnaJ molecular chaperone homology domain
SAMA_RS14730	SM00650	Ribosomal RNA adenine dimethylases
SAMA_RS14745	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS14745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS14790	SM00986	Uracil DNA glycosylase superfamily
SAMA_RS14790	SM00987	UreE urease accessory protein, C-terminal domain 
SAMA_RS14805	SM00091	PAS domain
SAMA_RS14805	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS14835	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SAMA_RS14835	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SAMA_RS14935	SM00387	Histidine kinase-like ATPases
SAMA_RS14940	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS14940	SM00448	cheY-homologous receiver domain
SAMA_RS14955	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS14990	SM00267	diguanylate cyclase
SAMA_RS15005	SM00244	prohibitin homologues
SAMA_RS15025	SM00937	SAMA_RS15025
SAMA_RS15035	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS15035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS15035	SM01049	SAMA_RS15035
SAMA_RS15070	SM00267	diguanylate cyclase
SAMA_RS15170	SM00671	Sel1-like repeats.
SAMA_RS15175	SM01321	SAMA_RS15175
SAMA_RS15190	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS15225	SM00062	Bacterial periplasmic substrate-binding proteins
SAMA_RS15245	SM00420	helix_turn_helix, Deoxyribose operon repressor
SAMA_RS15245	SM01134	SAMA_RS15245
SAMA_RS15275	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAMA_RS15300	SM00953	SAMA_RS15300
SAMA_RS15315	SM00271	DnaJ molecular chaperone homology domain
SAMA_RS15335	SM00363	S4 RNA-binding domain
SAMA_RS15355	SM01060	SAMA_RS15355
SAMA_RS15360	SM01321	SAMA_RS15360
SAMA_RS15390	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS15405	SM00448	cheY-homologous receiver domain
SAMA_RS15405	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS15410	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS15410	SM00091	PAS domain
SAMA_RS15410	SM00387	Histidine kinase-like ATPases
SAMA_RS15410	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS15410	SM00448	cheY-homologous receiver domain
SAMA_RS15425	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS15475	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SAMA_RS15500	SM00267	diguanylate cyclase
SAMA_RS15510	SM00487	DEAD-like helicases superfamily
SAMA_RS15510	SM00490	helicase superfamily c-terminal domain
SAMA_RS15510	SM00847	Helicase associated domain (HA2)  Add an annotation
SAMA_RS15515	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS15515	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAMA_RS15515	SM00267	diguanylate cyclase
SAMA_RS15545	SM00900	SAMA_RS15545
SAMA_RS15565	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SAMA_RS15595	SM00267	diguanylate cyclase
SAMA_RS15610	SM00925	MltA specific insert domain
SAMA_RS15630	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS15665	SM00671	Sel1-like repeats.
SAMA_RS15670	SM00100	Cyclic nucleotide-monophosphate binding domain
SAMA_RS15670	SM00419	helix_turn_helix, cAMP Regulatory protein
SAMA_RS15680	SM00448	cheY-homologous receiver domain
SAMA_RS15680	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS15685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS15685	SM00387	Histidine kinase-like ATPases
SAMA_RS15690	SM01150	SAMA_RS15690
SAMA_RS15760	SM00244	prohibitin homologues
SAMA_RS15765	SM00244	prohibitin homologues
SAMA_RS15785	SM00853	MutL C terminal dimerisation domain
SAMA_RS15785	SM01340	SAMA_RS15785
SAMA_RS15790	SM00257	Lysin motif
SAMA_RS15790	SM00646	SAMA_RS15790
SAMA_RS15835	SM00479	SAMA_RS15835
SAMA_RS15880	SM00434	DNA Topoisomerase IV
SAMA_RS15890	SM00387	Histidine kinase-like ATPases
SAMA_RS15890	SM00433	TopoisomeraseII
SAMA_RS15960	SM01005	Alanine racemase, C-terminal domain
SAMA_RS15965	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS16000	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SAMA_RS16005	SM00316	Ribosomal protein S1-like RNA-binding domain
SAMA_RS16005	SM00357	Cold shock protein domain
SAMA_RS16005	SM00955	SAMA_RS16005
SAMA_RS16010	SM00671	Sel1-like repeats.
SAMA_RS16015	SM00788	Adenylosuccinate synthetase
SAMA_RS16035	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAMA_RS16040	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAMA_RS16075	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS16085	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAMA_RS16105	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS16135	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAMA_RS16135	SM00924	MgtE intracellular N domain
SAMA_RS16160	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS16160	SM00267	diguanylate cyclase
SAMA_RS16180	SM00849	Metallo-beta-lactamase superfamily
SAMA_RS16185	SM00357	Cold shock protein domain
SAMA_RS16185	SM00894	Excalibur calcium-binding domain
SAMA_RS16210	SM00327	von Willebrand factor (vWF) type A domain
SAMA_RS16210	SM00609	Vault protein Inter-alpha-Trypsin domain
SAMA_RS16215	SM00530	Helix-turn-helix XRE-family like proteins 
SAMA_RS16220	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS16220	SM00091	PAS domain
SAMA_RS16220	SM00387	Histidine kinase-like ATPases
SAMA_RS16220	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS16220	SM00448	cheY-homologous receiver domain
SAMA_RS16225	SM00448	cheY-homologous receiver domain
SAMA_RS16225	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS16245	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS16245	SM00267	diguanylate cyclase
SAMA_RS16245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS16265	SM00978	SAMA_RS16265
SAMA_RS16285	SM01321	SAMA_RS16285
SAMA_RS16300	SM00883	Chaperonin 10 Kd subunit
SAMA_RS16320	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS16320	SM00091	PAS domain
SAMA_RS16320	SM00387	Histidine kinase-like ATPases
SAMA_RS16320	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS16320	SM00448	cheY-homologous receiver domain
SAMA_RS16325	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS16325	SM00670	Large family of predicted nucleotide-binding domains
SAMA_RS16330	SM00487	DEAD-like helicases superfamily
SAMA_RS16330	SM00490	helicase superfamily c-terminal domain
SAMA_RS16355	SM00448	cheY-homologous receiver domain
SAMA_RS16360	SM00267	diguanylate cyclase
SAMA_RS16370	SM00563	Phosphate acyltransferases
SAMA_RS16435	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS16435	SM00267	diguanylate cyclase
SAMA_RS16455	SM00448	cheY-homologous receiver domain
SAMA_RS16460	SM00411	bacterial (prokaryotic) histone like domain
SAMA_RS16475	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS16475	SM00267	diguanylate cyclase
SAMA_RS16475	SM00448	cheY-homologous receiver domain
SAMA_RS16480	SM00448	cheY-homologous receiver domain
SAMA_RS16485	SM00091	PAS domain
SAMA_RS16485	SM00387	Histidine kinase-like ATPases
SAMA_RS16485	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS16485	SM01079	SAMA_RS16485
SAMA_RS16495	SM01154	SAMA_RS16495
SAMA_RS16555	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SAMA_RS16580	SM00387	Histidine kinase-like ATPases
SAMA_RS16580	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS16585	SM00421	helix_turn_helix, Lux Regulon
SAMA_RS16585	SM00448	cheY-homologous receiver domain
SAMA_RS16595	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS16600	SM00448	cheY-homologous receiver domain
SAMA_RS16605	SM00387	Histidine kinase-like ATPases
SAMA_RS16650	SM00878	Biotin carboxylase C-terminal domain
SAMA_RS16660	SM00014	Acid phosphatase homologues
SAMA_RS16720	SM00267	diguanylate cyclase
SAMA_RS16725	SM01004	Delta-aminolevulinic acid dehydratase
SAMA_RS16745	SM00487	DEAD-like helicases superfamily
SAMA_RS16745	SM00490	helicase superfamily c-terminal domain
SAMA_RS16755	SM00357	Cold shock protein domain
SAMA_RS16755	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS16755	SM00959	Rho termination factor, N-terminal domain
SAMA_RS16880	SM00387	Histidine kinase-like ATPases
SAMA_RS16880	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS16885	SM00448	cheY-homologous receiver domain
SAMA_RS16930	SM01219	SAMA_RS16930
SAMA_RS16960	SM00237	Domains in Na-Ca exchangers and integrin-beta4
SAMA_RS16965	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS16990	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS16990	SM00267	diguanylate cyclase
SAMA_RS16990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS17015	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS17015	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAMA_RS17015	SM00267	diguanylate cyclase
SAMA_RS17065	SM00014	Acid phosphatase homologues
SAMA_RS17110	SM01091	Transporter associated domain
SAMA_RS17120	SM00267	diguanylate cyclase
SAMA_RS17130	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS17140	SM00563	Phosphate acyltransferases
SAMA_RS17145	SM00563	Phosphate acyltransferases
SAMA_RS17160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAMA_RS17160	SM00895	SAMA_RS17160
SAMA_RS17185	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS17185	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS17185	SM00091	PAS domain
SAMA_RS17185	SM00267	diguanylate cyclase
SAMA_RS17210	SM00448	cheY-homologous receiver domain
SAMA_RS17210	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS17215	SM00387	Histidine kinase-like ATPases
SAMA_RS17235	SM00342	helix_turn_helix, arabinose operon control protein
SAMA_RS17425	SM00422	helix_turn_helix, mercury resistance
SAMA_RS17435	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS17475	SM00749	bacterial OsmY and nodulation domain
SAMA_RS17535	SM00965	Secretin and TonB N terminus short domain
SAMA_RS17555	SM00842	Cell division protein FtsA
SAMA_RS17565	SM00487	DEAD-like helicases superfamily
SAMA_RS17565	SM00490	helicase superfamily c-terminal domain
SAMA_RS17580	SM00563	Phosphate acyltransferases
SAMA_RS17645	SM00825	Beta-ketoacyl synthase
SAMA_RS17655	SM00822	SAMA_RS17655
SAMA_RS17660	SM00825	Beta-ketoacyl synthase
SAMA_RS17670	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAMA_RS17675	SM00450	Rhodanese Homology Domain
SAMA_RS17735	SM00267	diguanylate cyclase
SAMA_RS17735	SM01079	SAMA_RS17735
SAMA_RS17765	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SAMA_RS17775	SM01230	SAMA_RS17775
SAMA_RS17790	SM00344	helix_turn_helix ASNC type
SAMA_RS17825	SM00387	Histidine kinase-like ATPases
SAMA_RS17825	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS17830	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS17830	SM00448	cheY-homologous receiver domain
SAMA_RS17855	SM00448	cheY-homologous receiver domain
SAMA_RS17855	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS17860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS17860	SM00387	Histidine kinase-like ATPases
SAMA_RS17860	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS17865	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS17890	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SAMA_RS17930	SM01144	SAMA_RS17930
SAMA_RS17950	SM00671	Sel1-like repeats.
SAMA_RS17990	SM00344	helix_turn_helix ASNC type
SAMA_RS18005	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SAMA_RS18015	SM01321	SAMA_RS18015
SAMA_RS18030	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS18035	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS18035	SM00962	SRP54-type protein, GTPase domain
SAMA_RS18035	SM00963	SRP54-type protein, helical bundle domain
SAMA_RS18100	SM00563	Phosphate acyltransferases
SAMA_RS18170	SM00448	cheY-homologous receiver domain
SAMA_RS18175	SM00073	Histidine Phosphotransfer domain
SAMA_RS18175	SM00260	Two component signalling adaptor domain
SAMA_RS18175	SM00387	Histidine kinase-like ATPases
SAMA_RS18175	SM01231	SAMA_RS18175
SAMA_RS18180	SM00260	Two component signalling adaptor domain
SAMA_RS18185	SM00091	PAS domain
SAMA_RS18185	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS18190	SM00138	Methyltransferase, chemotaxis proteins 
SAMA_RS18195	SM00448	cheY-homologous receiver domain
SAMA_RS18215	SM00631	SAMA_RS18215
SAMA_RS18240	SM00316	Ribosomal protein S1-like RNA-binding domain
SAMA_RS18240	SM00732	Likely ribonuclease with RNase H fold.
SAMA_RS18250	SM00448	cheY-homologous receiver domain
SAMA_RS18250	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS18255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS18255	SM00387	Histidine kinase-like ATPases
SAMA_RS18255	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS18260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS18260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS18310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS18310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS18320	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS18325	SM00852	Probable molybdopterin binding domain
SAMA_RS18355	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS18370	SM00448	cheY-homologous receiver domain
SAMA_RS18370	SM00862	Transcriptional regulatory protein, C terminal
SAMA_RS18375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAMA_RS18375	SM00387	Histidine kinase-like ATPases
SAMA_RS18375	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS18385	SM00267	diguanylate cyclase
SAMA_RS18530	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAMA_RS18565	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS18570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAMA_RS18580	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS18605	SM00267	diguanylate cyclase
SAMA_RS18640	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS18665	SM00342	helix_turn_helix, arabinose operon control protein
SAMA_RS18675	SM00448	cheY-homologous receiver domain
SAMA_RS18695	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SAMA_RS18705	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS18705	SM00267	diguanylate cyclase
SAMA_RS18725	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAMA_RS18750	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SAMA_RS18770	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SAMA_RS18825	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SAMA_RS18840	SM00052	Putative diguanylate phosphodiesterase
SAMA_RS18840	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SAMA_RS18840	SM00091	PAS domain
SAMA_RS18840	SM00267	diguanylate cyclase
SAMA_RS18855	SM00563	Phosphate acyltransferases
SAMA_RS18925	SM00420	helix_turn_helix, Deoxyribose operon repressor
SAMA_RS18925	SM01134	SAMA_RS18925
SAMA_RS18945	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS18985	SM00470	ParB-like nuclease domain
SAMA_RS19000	SM01228	SAMA_RS19000
SAMA_RS19040	SM00248	ankyrin repeats
SAMA_RS19060	SM00028	Tetratricopeptide repeats
SAMA_RS19060	SM00387	Histidine kinase-like ATPases
SAMA_RS19060	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS19065	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SAMA_RS19080	SM00267	diguanylate cyclase
SAMA_RS19120	SM00387	Histidine kinase-like ATPases
SAMA_RS19120	SM00388	His Kinase A (phosphoacceptor) domain
SAMA_RS19125	SM00257	Lysin motif
SAMA_RS19130	SM00382	ATPases associated with a variety of cellular activities
SAMA_RS19170	SM00267	diguanylate cyclase
SAMA_RS19215	SM00267	diguanylate cyclase
SAMA_RS19225	SM00267	diguanylate cyclase
SAMA_RS19255	SM00267	diguanylate cyclase
